LOCUS       DATDAJ010000001         8320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_10249, whole genome shotgun sequence.
ACCESSION   DATDAJ010000001 DATDAJ010000000
VERSION     DATDAJ010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8320
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10249"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VIS53_00005"
     CDS             <1..389
                     /locus_tag="VIS53_00005"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5766193.1"
                     /translation="HLAQDVSAVTTACALVKREVYLQVGGLDENLAVTFNDVDFCLRL
                     REAGYRIVWTPYAELIHHESASRGFDNSAPKQVRFLAEVDYMQSKWGDILQRDPFYNP
                     NLSLDENLFTLAFPPRATKPWQSVAG"
     gene            422..3142
                     /locus_tag="VIS53_00010"
     CDS             422..3142
                     /locus_tag="VIS53_00010"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021616.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766194.1"
                     /translation="MTESIEQKMVVADYAFRLDALPERVTFSNQIKITGWLLHRRGLP
                     IHGIRGIVRDILRRRSIFRARRKRSRPLIAAAYPDLPEAGQSGFLLQLELPVGRSKIT
                     IQVQDHRKIWRTIFVTDLWAFPLTFLGQIGLPRVERFLSTYLAQLFVGNSRNTATLVK
                     PPPLSQVEVSFPREKLQSLTGEAGSTQCDIRAVDLFVTSKSNLFIREIADLLCAGFRA
                     AGCEAHLLIDQIPAEKAQEGKIQIVVTPHEFFNLFLRDKLPWEKTQRLTNHLFLLGTE
                     QPESEWFDSNLVVAPHARAMLDIHLSGVAAYRARGLPCFHLPLGYHPLLEQSVVPAKS
                     KRDLDICVLAAMTDRREEFIAANADFFAARNCHIRFVPIGFAKTEETRSYLRAPQRNA
                     LLQQTKILLNIHYSDLQYFEWHRALIAIANRCCLITETCEGFEPLVPGKHFVMARRDD
                     LTTCCEYYLNHEAERKAITAAAYDFIRERFTQKDNCRAFLQQIDAIFRRQGDGADSNF
                     DKEAPQKQAFASEPLPDALAKHLSRRPLALFLSALREDLSSLFRPARTEPTRNGKTST
                     EPTETARRIAIVSDIRRGYIERFEAQTTSHEQGKAIFQSIDNSRSNSSTPAISVIITL
                     YNYGAYIRQCLKSLQDSDTTAIPGGIEVLIVNDASSDDSLKQAMVSQKDSRHPVRIID
                     KQLNTGLADARNLGLQLARAPYIFILDADNMVFPHALEQLYATIVRDNSAAAYSMLCR
                     FQSRQDDREGLLSYFDWDPQMLVEFPYIDAMAMFDREQLIKIGGYDNELYKLGWFGWE
                     DYDLWLRIAGAGLRVSFLPNVLCLYRHHDRAMSNTTNLFERELVAHLFEKHRALIDKY
                     PPKRRILGVNRSRFEKEVGLIRLTKNPPTREKDSGCSKDLAPEHQTSAGA"
     gene            complement(3048..4970)
                     /locus_tag="VIS53_00015"
     CDS             complement(3048..4970)
                     /locus_tag="VIS53_00015"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766195.1"
                     /translation="MNKELEALERKLEIRNRELAEAHSHIAALEEKLLKLKQYRRELK
                     SLKEERRTLRKSPERRIGQVLLAPYRLLERPAKTVWRKLHQPKPTTGNSVAQSEYQQW
                     FQHHRASPQQLQRMRVEARSFVSQPLVSILTPVFDTPVSWLGEAVDSVLAQVYENWEL
                     LLIDDGSTARDLLRALPALAARDRRIRLVRLQSHQGISAALNKGLDVAEGQWLTFLDH
                     DDVLEPDALFQNVRLLQENPGIDLIYSDEDKLTEAGFDSPILKPDWSPDFFLSCNYLC
                     HMIFVRRDLVRAIDGFRREFDGSQDYDLLLRVTERTNRIHHIPRVLYPWRRSENSSAS
                     DVRQKPGQLEASWRAIEAHLKRRGEQAQVAVDWRTHAFYVRRELREAKKISVIIPSFH
                     GPESLDRCLESVISRTSYPNYEIVIVQVGERDKIAKATPDFSHRVLYFADAVNDSAAK
                     NHAVAHTDSPWLLFLDDNVEAIGPDWLTIMAEHVQRPEIGAVGSRLINPGGTIEHAGL
                     VLGVNGIAQAAFRGFPAEHPGVNRQLQMTRNYSAISGACLLMRREVFQGIGGFDEKLS
                     GTLAGVDLCLKIRRADYLIVYTPLAKLCWDPSPPEEVDASAEVIMRQRWSDVLERDPY
                     YNPNLSRESADFSLGE"
     gene            5159..7060
                     /gene="waaF"
                     /locus_tag="VIS53_00020"
     CDS             5159..7060
                     /gene="waaF"
                     /locus_tag="VIS53_00020"
                     /inference="COORDINATES: protein motif:HMM:TIGR02195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEY5766196.1"
                     /translation="MLDFVVYLLYRAGLSVVAALPLPFLFGFGEFLGDCAWMFSGKYR
                     RLATRNLEIAFANEKSPRELRQLVRRHFRRLGANLLCSAKLTQMPPEKILERVEVENI
                     ESMAREFRAGVPVVLVLSHIGTWEVFAQLMPKFFGFVRGASVYQGLGNRFIDKHVRRT
                     RSHTGLELFDRHDGFEPVIDLLRSGGGVGVLSDQHAGDHGVWTPFFGRLASSSPLPAL
                     LAKRTRAALIAAGVYTTGRARWRMVFTDRFDEAGASVAVLTSKINEVIEQQIRRAPED
                     WFWVHNRWKTPEPNFLLAHYKRGIYLPPGISAGDLKPFRILIRSSNWLGDAVMSVPAV
                     RAIKNGRPDVHVTVAAPDKIAPMWKLIPEVDAIILLPKGSIFSVVRLLRQQMRFDVAI
                     LFPNSLRVALETWLSAIPQRVGYRGHRRSCLVDQIVREPRKPRPPEHHSLRFLRIARE
                     CGAETSNIEFPKPNQTSNIKHQTLIGLCPGAEYGPAKRWLPERFAEVAAKITAQASAQ
                     WILLGTKNDTAIGEQIATAIGDHCVNRIGQTTLDQLIDELRRCRLLLTNDTGTMHLAA
                     LLGVPVVAIFGSTEPRLTGPLGNKHIILRHHVECSPCFLRECPIDFRCMKAVSADEVA
                     GAVLSMLAK"
     gene            complement(7064..7966)
                     /locus_tag="VIS53_00025"
     CDS             complement(7064..7966)
                     /locus_tag="VIS53_00025"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEY5766197.1"
                     /translation="MTKFDLRTQDCITGMSRLADASVDLVVTSPPYNLGITYGKYSDR
                     QDRGSYLGWCGEWAEQIRRVLKSNGSFFLNIGAAPSNPMLPHEIVMTLREFFVLQNTI
                     HWIKSIAIDTADGKAGEPDPHLHPLPGQGEADTKRQVRVECGIKTFGHFKPINSPRFL
                     NDCHEYVFHFTKSGRVELNRLALGVPYQDKSNIARWSHSQGKDLRCRGNTWFVPYETI
                     QNREKERPHPATFPVQLAEWCINLHGASNVRSMLDPFLGIGNSAVAARGRGVERFLGF
                     EIDDAYLAEAKRRIASGRGGRARK"
     gene            8173..>8320
                     /locus_tag="VIS53_00030"
     CDS             8173..>8320
                     /locus_tag="VIS53_00030"
                     /inference="COORDINATES: protein motif:HMM:NF017501.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEY5766198.1"
                     /translation="MADKPSKLKIADREFASRLLVGTGKFASNELMRDALIASGTELV
                     TVALR"
BASE COUNT         1868 a         2303 c         2239 g         1910 t
ORIGIN      
        1 cacatctcgc gcaagatgtt tccgcagtga ccactgcttg tgcgctggtg aagagggaag
       61 tgtatctaca agtcggaggg ttagacgaaa atctggcagt cactttcaat gacgtcgact
      121 tttgcctgcg attgcgtgaa gcgggttacc gcattgtctg gacgccatac gcagaattga
      181 ttcaccacga gtcggccagt cgcggtttcg acaacagcgc gccgaaacaa gttcggtttc
      241 tagcggaagt cgattacatg caatcgaagt ggggcgatat tttgcagcgc gatccttttt
      301 acaatccaaa cctgtcgctc gacgaaaatc tcttcacact ggctttccca ccacgggcga
      361 ccaagccgtg gcagagtgtt gcgggttaac tgtgcctgat tgaagtcctg ctgcaccgat
      421 tatgacggaa tcaatcgagc agaaaatggt agtcgcagac tatgcatttc gtttggatgc
      481 gctgccagag cgggtcactt tcagcaacca aatcaaaatc accggctggc tgttgcatcg
      541 ccgaggcctg ccgattcacg ggattcgtgg aattgttcgc gacattctac ggcgccgatc
      601 gattttccgg gcgcgccgca aaagatcgcg accactgatc gcggccgctt accccgattt
      661 gcccgaagcg ggacaaagcg gctttcttct gcagctcgag ctgcccgttg gccgaagtaa
      721 aattacgatc caagtccagg accatcgaaa aatctggcga acgattttcg tcaccgatct
      781 gtgggctttt cctcttactt ttttaggtca gataggtctg ccgcgcgtcg agcgattctt
      841 gtccacttat ctcgcgcaac ttttcgtcgg aaacagccga aacactgcga ccttggtaaa
      901 gccacccccg ctcagccagg ttgaggttag ttttcctcgc gagaagctcc aaagcttgac
      961 gggtgaggcc ggttcaacgc agtgcgatat tagagcggta gacttgttcg tcacttcgaa
     1021 gtcgaatctg tttatccgcg aaatcgccga cttactttgt gcaggcttcc gcgctgcggg
     1081 atgcgaagcg caccttttga tcgaccaaat tccggccgaa aaagcgcagg aagggaagat
     1141 tcaaatcgtg gttacacctc acgagttctt taatttattc ctgagggata agcttccctg
     1201 ggagaagacg cagcgcctaa caaatcatct attcctgctg ggcaccgaac aacccgagag
     1261 cgaatggttc gacagcaatc tcgtcgtggc accgcatgca cgcgcgatgc tcgacattca
     1321 tttatccggc gtcgcggcat accgcgctcg cggcctgccc tgtttccatt tgccgctcgg
     1381 ttaccaccca ttgcttgaac aaagtgttgt accagcaaag tccaaaagag acctcgacat
     1441 ttgtgttctg gctgcgatga ccgaccgccg tgaggaattc atcgccgcta atgccgattt
     1501 cttcgcggca cgtaactgcc atattaggtt cgttccgatc ggcttcgcca agaccgaaga
     1561 gacgcgaagt tatttgcggg ctccgcaacg caacgcgctg ttacaacaga caaagatact
     1621 gctgaacatt cactactcag atttgcaata tttcgaatgg catcgcgcgc tgatcgctat
     1681 tgcgaatcgt tgctgtctga taaccgaaac ctgcgaaggc ttcgagccac ttgtcccagg
     1741 aaaacacttc gtgatggcaa ggcgggatga cctaacgaca tgctgtgaat actatctaaa
     1801 ccacgaggct gaacggaaag cgatcacggc agcggcttat gatttcatcc gcgaacgctt
     1861 cacacagaaa gacaattgcc gcgcatttct gcagcagata gacgcaatat ttcggcgaca
     1921 aggcgacggg gcggattcga atttcgacaa agaagcgccc cagaaacaag cattcgcaag
     1981 cgagccttta cccgacgccc tggcaaaaca tctttcacga agacctttag cacttttcct
     2041 ctcggcgttg cgcgaagatc tttcaagctt gtttcgcccc gcgcgtacag aacctacaag
     2101 aaacggcaag acctccacag agccaaccga aacagcgcgg cgcatcgcca tcgtctccga
     2161 tatccggcgt gggtacatcg agcgattcga ggcgcaaaca acatctcacg aacaagggaa
     2221 agcgattttt cagtcaatcg acaattcgcg ttctaatagc agcacgcccg cgatttcggt
     2281 gatcatcacg ctttacaatt acggcgccta cattcggcag tgcctgaaaa gcctgcaaga
     2341 ttcggacact acggcgattc cgggaggcat cgaggtgctg atcgttaatg acgcgtctag
     2401 cgacgattcg ctgaagcagg caatggtgtc tcaaaaagat tcacgccatc cagttcgaat
     2461 tatcgataaa cagctgaata ccgggctggc cgatgcgcgc aatctcggtc ttcagctggc
     2521 gcgtgcgcct tacattttta tcctcgatgc ggataacatg gtgtttccac acgcactcga
     2581 gcagctgtac gcgacgatcg tgagagacaa ctccgctgct gcttactcga tgctctgtcg
     2641 ttttcaaagt cgccaagatg atcgggaagg actgctttcc tatttcgatt gggacccaca
     2701 gatgttggtc gagtttccct atatcgatgc gatggcaatg ttcgatagag agcagctcat
     2761 caaaatcggc ggttatgata atgaactgta caaactcggt tggtttggct gggaggacta
     2821 tgacctgtgg ctgcgaattg ccggggcagg actccgtgtg agctttctgc cgaacgtcct
     2881 ttgtctctat cgccatcatg atagggcgat gagcaataca accaatcttt tcgagcgcga
     2941 actcgtcgcg catttgttcg aaaaacaccg tgcgctcatc gataaatacc cgccgaaacg
     3001 acgtattctt ggagtgaatc gctcccggtt cgagaaggaa gtaggcctta ttcgcctaac
     3061 gaaaaatccg ccgactcgcg agaaagattc gggttgtagt aaggatctcg ctccagaaca
     3121 tcagaccagc gctggcgcat gattacttct gcgctagcgt cgacctcttc aggtggcgac
     3181 ggatcccagc aaagttttgc cagaggcgta taaacaatca ggtaatccgc gcgccgtatt
     3241 ttgaggcaaa gatcaacacc tgcgagagtg ccggagagct tttcgtcgaa tccgccgatt
     3301 ccctgaaaaa cttcgcgccg catcaacagg catgcgccgg agatcgcgct gtagttgcgc
     3361 gtcatctgca actgacggtt cacgccagga tgctccgctg ggaaaccgcg aaaagcggcc
     3421 tgcgcaattc cgttgacgcc caaaacaagg ccggcgtgtt cgatggtgcc gccagggttg
     3481 atcagtcgcg agccgactgc gccaatctcg ggccgctgta cgtgctcagc catgatcgtt
     3541 agccagtccg gaccgatcgc ttccacattg tcgtcgagaa aaagaagcca gggactgtca
     3601 gtgtgcgcaa cggcatgatt tttcgctgcg gaatcattca cagcatctgc gaagtacagc
     3661 acacgatgcg aaaaatctgg ggtcgcctta gcgattttgt cgcgctcgcc cacttgaacg
     3721 atcacaatct cgtaattcgg atagcttgtc ctgctgatta cgctttcgag acatcgatcg
     3781 agcgactccg ggccgtgaaa acttggaatg ataacggaga tttttttggc ttcgcgcagc
     3841 tcgcgtctca cataaaatgc atgggtccgc cagtccacag caacctgggc ctgctcgccg
     3901 cggcgtttca agtgagcttc aattgcgcgc cacgacgctt cgagctgtcc tggtttctgg
     3961 cgaacgtcgc tcgcgctgga attttcgctc cgccgccaag gatagagcac ccgcggaata
     4021 tgatggattc ggttagttcg ctcggtgaca cgcaggagaa gatcgtaatc ttgtgagcca
     4081 tcaaactccc gtcgaaaccc gtcaattgct cgcacaagat cgcggcgcac aaagatcatg
     4141 tgacacaaat aattgcagga cagaaagaag tcgggcgacc aatccggttt taatatcggt
     4201 gagtcaaacc cggcctccgt gagtttgtct tcgtccgagt aaattagatc gatgccggga
     4261 ttttcctgaa gcaggcgtac attttggaag agggcatcgg gctcaagcac gtcgtcatga
     4321 tcgagaaagg tgagccactg gccttcagca acatcaaggc ctttgtttaa cgcggccgag
     4381 atgccttgat ggctctgtag cctaacgaga cgaatccgcc ggtcacgcgc agccagggca
     4441 ggtaaagcgc gcagcaggtc cctggctgtc gatccatcat cgatcaacag cagttcccaa
     4501 ttttcataaa cctgcgcaag cacagagtct acagcctcgc ccagccacga aaccggcgtg
     4561 tcaaatacgg gcgtaagaat gctgacgagc ggttgcgaaa cgaaactgcg cgcctcaact
     4621 cgcatccgct gcaactgctg cggactcgca cgatgatgct gaaaccattg ctggtattcg
     4681 ctttgtgcaa cagagttccc ggttgtcggc ttcggctggt gaagctttct ccaaactgtc
     4741 tttgcaggtc tttccaaaag ccgatagggc gcgagcaata cctggccgat cctgcgttca
     4801 ggcgatttgc gcagcgtgcg tctctcctcc ttcagcgact tcagctcacg ccggtattgt
     4861 ttcagcttca gtaatttttc ttccagcgca gcgatgtggc tgtgcgcttc cgccaattca
     4921 cggttgcgga tttcaagctt tcgctccaaa gcctccagtt ccttgttcat tttgctgcac
     4981 aggccgttgt tagaatgtga gccaaatccg atcggctgga atacctgaat ggccgcgaca
     5041 cagcacacat tatattggtt gaaggccgtg gcaggcaaat ctaccctgcc cgcgccgaag
     5101 gtggaacgcg ttctccgaac gcgttcatcg tcttcggaga agccgatcca tcttcgcaat
     5161 gctcgatttt gtcgtttacc tcctttatcg cgccggctta tccgttgttg ccgcgctgcc
     5221 gttgccgttt ctcttcggtt tcggggaatt cctgggcgat tgcgcgtgga tgttttccgg
     5281 gaaatatcgc cgtctggcga cgcgcaacct tgaaattgca tttgcgaatg aaaaatcgcc
     5341 gcgcgaattg cgtcagcttg tgcgtcgcca tttccggcgg ctcggcgcca atctgctttg
     5401 cagcgcgaag ctgacgcaga tgccaccgga gaaaatcctg gagcgcgtcg aggtcgaaaa
     5461 tatcgagtcg atggcgcggg aatttcgtgc gggcgttccg gtggtgcttg ttctgagtca
     5521 tatcggaacg tgggaagtat tcgcgcaatt gatgccgaag ttctttgggt ttgttagggg
     5581 cgcgagcgtg taccaggggc taggcaaccg tttcattgac aagcatgttc ggcggactcg
     5641 aagtcatacc gggttggaat tgttcgatcg ccacgacggc ttcgagccgg tgatcgactt
     5701 gctgcggtcc ggcggcggcg tcggcgtttt gtcggatcaa cacgccggcg atcacggtgt
     5761 gtggacgcca tttttcgggc ggcttgcgtc cagttcgcct ttgccagctc tactcgccaa
     5821 gcgtacacgg gcggcgctaa ttgccgcggg agtttacacc accggacgcg cgcgctggcg
     5881 catggtattc acggaccggt tcgatgaggc cggcgcttcg gttgcggtgc tgacgtcgaa
     5941 aataaacgaa gtgatcgagc aacaaattcg ccgcgcgccc gaagactggt tctgggtgca
     6001 taaccgctgg aaaacccctg agcccaattt tctcctagca cactacaaac gcggcattta
     6061 tttgccgccc ggcatttcgg ctggtgatct gaagccattt agaattctca ttcgttcaag
     6121 taactggctg ggagacgccg tgatgagcgt gccggcagtc cgcgcgatca agaatgggcg
     6181 tcccgacgtg cacgtgacag tcgctgcgcc cgacaagatc gcgccgatgt ggaagctcat
     6241 tccggaagtg gacgcgatca ttcttttgcc aaagggttcg attttttcag ttgttaggct
     6301 gttaaggcaa caaatgcgtt ttgacgtggc gattctcttc ccgaattcgt tgcgcgtcgc
     6361 gcttgaaaca tggttgagcg caattcctca aagagtgggc tatcgcggcc acaggcggag
     6421 ttgcctcgtc gatcaaatcg tccgcgaacc acgaaagccc aggccgcccg aacatcattc
     6481 gctgcgtttc cttcggattg cgcgtgaatg cggggcagaa acatcgaaca tcgaatttcc
     6541 aaaaccaaat caaacatcaa acatcaaaca tcaaacactg atcggtcttt gtcccggcgc
     6601 ggaatacggc ccggccaagc gatggttacc ggaacgattc gctgaggtag cggcaaagat
     6661 caccgcgcaa gcatcggcgc aatggattct tcttggaacg aagaacgaca ccgcaatagg
     6721 cgaacagatc gccactgcga tcggcgatca ttgcgtgaac cggatcggcc agacgacgct
     6781 cgatcaactt atcgacgaac tgcggcgatg ccgtttgcta ctcaccaacg acacgggcac
     6841 gatgcatctc gccgcgttac ttggcgtgcc tgtggtcgcc attttcggct cgaccgaacc
     6901 gcgcctgact gggccactcg gcaataagca cattattttg cgacaccatg tcgaatgcag
     6961 cccctgcttt ctccgcgaat gtccaatcga tttccgctgc atgaaagccg tcagcgccga
     7021 cgaagttgcg ggtgccgtgc tgtcgatgct cgccaagtga attttacttt cgagctcgac
     7081 cgccgcgacc gctagcaatt cgccgcttcg cttccgcgag atacgcgtca tcgatttcaa
     7141 atccgagaaa tctctcaacg ccacgccccc gcgctgcgac cgccgaatta ccgatgccga
     7201 gaaaaggatc cagcatggat cggacgttgg acgctccgtg caagttgatg caccattcgg
     7261 cgagttgaac cgggaatgtc gccggatgcg gccgttcttt ctcgcggttt tgaattgttt
     7321 cataagggac gaaccacgtg ttcccgcggc aacgcagatc ttttccctga ctatgcgacc
     7381 agcgcgcgat gttgctctta tcctgatacg gaacgccaag cgccagcctg ttcagttcga
     7441 cgcgaccgga cttcgtgaaa tgaaaaacat attcgtggca atcgttcaga aatcgcggcg
     7501 aattgatcgg cttgaaatga ccaaacgttt tgataccgca ttcgaccctc acctggcgct
     7561 tcgtgtccgc ctctccctgg ccagggagag gatggaggtg agggtcgggc tcgccggctt
     7621 ttccatcggc cgtgtcgatc gcgatggatt taatccagtg aatcgtgttt tgcagcacga
     7681 aaaactcgcg caacgtcatc acgatttcgt gcggcagcat cggattcgac ggcgcggcgc
     7741 cgatgttaag aaaaaaggag ccattcgatt ttaagacgcg gcgaatttgc tctgcccatt
     7801 cgccacacca acctaaatac gacccccggt cctgacggtc ggaatacttc ccgtaggtga
     7861 ttccgagatt gtatggcggc gatgtcacca caagatcaac gcttgcatct gcaagacgcg
     7921 acattcctgt gatgcaatcc tgcgtgcgaa gatcaaattt ggtcacgaac gaaacattgc
     7981 aggtttgcgc gtttgtacaa gtcggaacat agatctgcgg tctgtgcgcc cagcgggttt
     8041 gaaacccgcg gcatctgatg cgacacaccc tttcgcgcct agacagcgga gtttaactcc
     8101 gctgggcgca cagggcacag ccttatgttc ccgcacaatt cgcgcgtttg gtgaattcgc
     8161 ttatcttttc ccatggcgga caagccttca aaattgaaga tcgccgatcg cgagtttgca
     8221 tcgcgtctgc tcgttggcac gggaaaattt gcgtctaacg agttgatgcg ggacgcactc
     8281 atcgccagcg gcactgagtt ggtcactgtc gcgctccgtc
//
LOCUS       DATDAJ010000002         4761 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_19826, whole genome shotgun sequence.
ACCESSION   DATDAJ010000002 DATDAJ010000000
VERSION     DATDAJ010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4761)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4761)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4761
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19826"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1425)
                     /locus_tag="VIS53_00035"
     CDS             complement(<1..1425)
                     /locus_tag="VIS53_00035"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HEY5766199.1"
                     /translation="MNWRNTLILAIIAFAGVAYFRFFEMKRPGTEEARRQSQNMINFD
                     RTKIDGIVIQNGDQKIEIRRSDNKWRLETPIKDQADSALVDSLLSDLENWQKEGTIPA
                     KEIDADKSKLAEYGLNNPKLKLKLLGHDRPPEILFGKDAAMEGRMYVRFQNSKETFLA
                     GQSVKKDIDKKPEEFRDRKLSELSNAQVRRVVLKTPDGEIELEKKDTNWEILKPLRAR
                     ADDQKVNDLISQVTSARIGQFVAEDRGDLRPYGLAEPRGSITLFDQEQKKDQKVEIGE
                     SIKVAGREDKGQTLQIGAIPEKGKEQVYVRFAPRGSVYTLPKKIEEILNTKPADLRDN
                     HLVRIDTNILDRITIDALGKTKTVLARKVGNWTIINRNNAPTDAGAVRRMIDALQNER
                     VTKFVEDVASNLPKYGLDKPQMQLTFSSFASENTAETKAGEEPFATIAFGKDEGDNVY
                     ARLTDEPFVVAVHRGLLDQISPDPL"
     gene            complement(1427..2893)
                     /locus_tag="VIS53_00040"
     CDS             complement(1427..2893)
                     /locus_tag="VIS53_00040"
                     /inference="COORDINATES: protein motif:HMM:NF021351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GldG family protein"
                     /protein_id="HEY5766200.1"
                     /translation="MKIGRIRIGLNVVVQIVLILFLAAMVNSLAFKHYKRWDFSRDQK
                     YALSDKTKRFLDTLKDKMRITVFFSPSTPITAELQYLLTEYQYAGKGKIDVEQIDPER
                     NLSRAKELFDKYKVVTDESLLVLDYDGRNKTVKASEMADVDQSGTAFGEGPRVAAFKG
                     EQAITSAMIDLVEGKKKTLGYVTGHKEPALSAPTSPITLLKTFIENENIKFQELNLLD
                     QPAIPPDVNAVMIVGPQYDFSDREMQVLRDFWDKQGRILVLVDPAANTPRLRAFLDEL
                     GVKVNDDRLMVFVRTGIQELALTRDVQAHFLGDSPITKRLADVRAILVGGTASLTLDP
                     NRGRAANIRLEPLIQAEKGYFAETDYNSDNQVKLQADAQKAGDVPLTIAASAEQGGSA
                     DARVQVSSSRLIAVSNATFVQDNAIMQDQAALDFVSGAVNWLLSREQMIGIAPKIPKP
                     LTFSIDPEGLRRLRWILLVLMPLIPAVIGTVVWWQRRV"
     gene            complement(2936..3691)
                     /locus_tag="VIS53_00045"
     CDS             complement(2936..3691)
                     /locus_tag="VIS53_00045"
                     /inference="COORDINATES: protein motif:HMM:NF024091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY5766201.1"
                     /translation="MRKFWTLLTREVRSYFYSPIAYIVMIFFLIISGIDFYFQVSFMN
                     QRQVQYTIQEAFFNSVFFWFAFVLIFPLITMRLFAEEFKLGTIEPLTTAPVRDWQVVL
                     SKFFGALVFYLILWIPTLVYFWIFAKVTNQPAAHSPGAYFGSYLMLLLLGMFYLSIGC
                     LTSVLTRNQIIAAIISFCAITLLFFLGLVQFILLNVTSETRELLGYFSAIEHMGTFSR
                     GIIDTRPIVLYVSMTIVMLMLTYQAFQSRKWRL"
     gene            complement(3716..4651)
                     /locus_tag="VIS53_00050"
     CDS             complement(3716..4651)
                     /locus_tag="VIS53_00050"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5766202.1"
                     /translation="MIKVENLTKRYAGQTAIQDLNFEVSRGEIMGFLGPNGAGKTTTM
                     RILAGFMPPTSGRASIAGFDVFEKSLQARAHLGYMPENVPLYSDMRVTEYLNYRAALK
                     GVPHRRIAERVGDVKELCGLKDVERKLIGTLSKGYRQRVGLADALLAEPDLLMLDEPT
                     IGLDPNQIRQVRELIKNLGRQHTILLSTHILPEVEMTCSRVIIIHKGRIEACDTPENL
                     LGKIRQAGGVELEAKIGNDNGEEQLKKIPGVRDVLMHGEDDWKKFSLRVESGADVREE
                     VFRLAVERQWAVRELTQRRGTLEDVFVELTHPDQI"
BASE COUNT         1036 a         1337 c         1206 g         1182 t
ORIGIN      
        1 cagcggatcg ggtgaaatct gatcgagcaa cccgcgatgc actgccacca caaatggctc
       61 atccgtgagg cgcgcgtaaa cgttgtcgcc ctcatctttt ccgaaggcaa ttgtggcaaa
      121 cggttcctcg cccgctttcg tttcggccgt gttctcggag gcaaatgaac tgaacgtcaa
      181 ttgcatctgc ggcttatcga ggccgtactt cggcagatta gaagcgacat cttcgacgaa
      241 ttttgtcaca cgttcatttt gtagcgcgtc gatcatgcgc cgaactgcgc ctgcatccgt
      301 tggtgcgttg tttcggttga tgattgtcca attcccaact ttgcgcgcga gaacggtttt
      361 ggttttgccc agcgcgtcga tcgtgatccg atcaagaata ttagtatcga tccgaaccaa
      421 atggttgtcc cgcaagtcgg ccggctttgt gttaagtatc tcttcgattt ttttcggcaa
      481 cgtgtaaaca gaaccgcgag gagcgaaccg cacgtacacc tgctcttttc ctttttccgg
      541 tattgcgccg atttgcaacg tctgcccttt gtcttcccga ccggcaactt ttatggactc
      601 gccaatctcg actttctgat cttttttctg ctcctgatcg aacaacgtga ttgatccgcg
      661 tggctccgct aacccgtaag ggcgcaggtc gccacgatcc tcagccacaa attgtccaat
      721 gcgcgccgag gtcacctgcg agatgaggtc attaactttc tgatcatcgg cgcgcgctcg
      781 gagcggtttc aggatctccc aattcgtatc tttcttctcc agctcgattt cgccgtcggg
      841 cgttttcaac accacccggc gtacctgcgc attactcagc tcgctcagtt ttctgtcccg
      901 gaattcctcc ggttttttgt ctatgtcttt cttaaccgat tggccggcaa gaaacgtttc
      961 ctttgagttc tggaaccgca catacatcct gccttccatt gcagcgtctt tgccgaacaa
     1021 aatttccggc ggccgatcat gcccgagcag tttgagtttc agctttgggt tgttcaggcc
     1081 gtactcagcg agcttactct tatcagcgtc gatctctttc gcggggatgg ttccttcctt
     1141 ttgccagttc tccaggtccg acaacaaact atcgactaac gcactatccg cctggtcttt
     1201 aataggcgtt tccaggcgcc atttgttgtc gctccgtcgg atttcgatct tttgatcgcc
     1261 gttttgaatc acgattccat cgatcttggt tcgatcgaaa ttgatcatgt tctgcgactg
     1321 acgccgggct tcttccgtgc ccggccgctt catttcgaaa aatctgaaat aagcgacgcc
     1381 agcgaacgca atgattgcca ggatgagcgt gttcctccag ttcatgtcag acgcgacgtt
     1441 gccaccagac gactgttcca atcacagcgg gaatcagcgg catcagaacc agaagaatcc
     1501 agcgtagtcg gcgcaatcct tccgggtcga tgctgaacgt gagaggcttc ggaatttttg
     1561 gcgcgatacc gatcatttgt tcgcgactca acagccagtt caccgcgccg gaaacaaaat
     1621 ccagcgccgc ctgatcctgc atgatggcat tgtcttgaac gaacgtggcg ttgctcaccg
     1681 cgatgagccg tgacgagctc acttgcacgc gagcatcggc gctgccgcct tgttccgctg
     1741 aggcagcgat tgtcagcggc acatcgccgg ctttctgcgc gtccgcttgc agcttcacct
     1801 gattgtctga gttgtaatcg gtctcggcaa aatagccttt ttctgcctgg atgagcggct
     1861 ccagccggat attcgcagct cggccgcggt tcggatccag tgtgagagaa gctgtgccgc
     1921 caactaaaat ggcccgcaca tcggcgagcc gctttgtaat cggactatcg ccgaggaaat
     1981 gcgcctggac atctctcgtc agtgcgagct cttgaattcc tgtgcgcaca aaaaccatta
     2041 gcctgtcgtc atttacttta acgcccagct cgtcaagaaa ggcacgtagc ctgggtgtgt
     2101 tcgcggccgg gtcgacaaga accaggatgc gtccctgttt gtcccagaaa tcgcgcagca
     2161 cttgcatttc gcgatctgaa aaatcgtact gcggcccgac gatcatcact gcgttcacat
     2221 ctggcgggat tgcaggctga tcgagcagat tcagctcttg aaacttgatg ttttcattct
     2281 cgatgaacgt cttcagcaac gtgattgggc tcgtcggtgc ggaaagcgcc ggttccttgt
     2341 gacccgtgac gtatcccaga gtcttctttt tcccttccac cagatcgatc atcgcgctgg
     2401 tgattgcttg ctcgcctttg aatgcggcga cccggggacc ttcgccgaac gccgtcccgc
     2461 tctgatcaac atcggccatc tccgatgcct tcaccgtttt gttgcgcccg tcgtagtcga
     2521 gcaccaaaag gctttcgtcg gtgacgacct tgtatttatc gaacaattcc tttgcccggg
     2581 aaagattccg ctccggatcg atttgctcga catcgatttt tcctttcccg gcgtattgat
     2641 attcggtcag cagatactga agctccgcgg taatcggcgt gctgggcgaa aagaaaaccg
     2701 tgatccgcat cttgtccttg agcgtgtcaa ggaaacgctt cgttttgtct gacagcgcat
     2761 atttctggtc gcgtgaaaaa tcccagcgct tgtagtgttt gaacgcaagc gagttcacca
     2821 ttgcggcgag aaacaggatc aacacgatct ggacgacaac gttgagaccg atccggatcc
     2881 ggccaatttt catcctgcgg cgcgtacgag gcccttttga ctgatcagcc atatatcaga
     2941 gcctccattt ccgggattga aatgcctgat acgtgagcat cagcatgaca atggtcatac
     3001 tcacgtagag aacgatcggc cgcgtgtcga tgatacctcg ggagaacgtt cccatgtgtt
     3061 cgatcgctga gaagtagccc aacaactcgc gcgtctcaga ggttacattc agcaggatga
     3121 actgcaccaa gcccaggaag aacagcagcg taattgcgca gaacgaaatg atcgccgcaa
     3181 taatctggtt ccgggttagc accgatgtga ggcaaccaat cgaaagataa aacatcccaa
     3241 gcagcaacaa catcaggtaa gagccgaagt atgctccggg agaatgcgca gccggctggt
     3301 ttgttacttt cgcgaaaatc caaaaataaa cgagcgtcgg gatccagagg ataaggtaaa
     3361 acacaagggc gccaaaaaat ttcgagagca ctacctgcca gtcgcgaaca ggcgcagtcg
     3421 tgagaggctc gatcgtgccg agcttaaatt cttcggcaaa caagcgcatc gtgatcaacg
     3481 gaaaaatcag gacgaatgcg aaccagaaaa acaccgaatt aaagaacgcc tcctggatcg
     3541 tgtactgcac ctgccgttgg ttcatgaatg agacttggaa ataaaaatcg atcccgctga
     3601 tgatcagaaa aaagatcatc acgatgtacg cgatcgggga gtagaaatag ctgcgcactt
     3661 cgcgggtgag cagggtccag aatttacgca tttgtccgca cgactcctta ctccatcaga
     3721 tttggtcggg atgggtcagc tcgacgaaca catcctcgag cgttccgcgg cgttgtgtga
     3781 gttcgcgcac cgcccattgc cgttcaacag cgagccggaa aacctcttcg cgcacgtccg
     3841 cacccgattc gactcgcaac gagaatttct tccaatcgtc ctcaccgtgc atgagcacgt
     3901 ctcgaacgcc cggaatcttc ttcaattgct cctcgccgtt gtcgtttccg atcttcgctt
     3961 caagctctac accgccggct tgtctgattt ttcccaacaa gttctccggc gtatcgcacg
     4021 cttcgattct ccctttgtga ataatgatta cgcggctgca tgtcatttcc acctcgggca
     4081 agatatgggt ggaaagcaaa atcgtgtgct gcctgcccag attcttgatc aactcccgca
     4141 cctgccgaat ttgatttggg tcgagaccaa tcgtgggctc gtcgagcatg agaaggtctg
     4201 gttctgctag tagagcgtcg gccaggccga ctcgctggcg atagcctttg gataaagtgc
     4261 cgatcaattt tcgttcaacg tctttaagac cgcaaagctc cttcacatcg ccaacgcgct
     4321 ctgcaatgcg gcggtgcggc acgcccttga gcgctgcgcg ataattcagg tattccgtga
     4381 cacgcatatc gctataaagc ggaacatttt ccggcatgta gccgaggtgc gcgcgcgcct
     4441 gaagcgattt ctcaaaaacg tcgaatccgg caatgctcgc gcgaccggaa gtcggcggca
     4501 tgaagcccgc cagaatgcgc atggtcgtgg ttttgccggc gccgttcggg ccgagaaatc
     4561 ccatgatctc gccacggctc acctcgaaat tcaaatcctg gatagcggtc tgaccagcgt
     4621 accgtttcgt caaattctca accttgatca tcttgcgaca cttcgatgag acaaccgaac
     4681 cgcgattgcg ttgccaattt ttttatcgcg ctttgagagt tagggcggcg agctcatgat
     4741 tctctccacg cgcacggatt a
//
LOCUS       DATDAJ010000003         4898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_22665, whole genome shotgun sequence.
ACCESSION   DATDAJ010000003 DATDAJ010000000
VERSION     DATDAJ010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22665"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1197)
                     /gene="kbl"
                     /locus_tag="VIS53_00055"
     CDS             complement(13..1197)
                     /gene="kbl"
                     /locus_tag="VIS53_00055"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF005394.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008890 - glycine C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HEY5766203.1"
                     /translation="MVAEFAKQLSQTLEEIKSQGLFKTERVITSPQDAHIAITGGKRV
                     LNMCANNYLGLADHPALIAAAKEALDTHGFGMASVRFICGTQDIHKELEASLTKFLGT
                     EETILYPSCFDANGGLFETLLTEQDAVISDELNHASIIDGIRLCKAQRFRYKHNDMAD
                     LEAQLRAAQDARFRLVATDGCFSMDGTIANLSAICDLAEKYNALTMIDDAHATGFLGK
                     TGRGTHEYRGVMGRIDIITGTLGKALGGASGGFTSGRKEIVDLLRQRSRPYLFSNTIA
                     PPVVAASLKALDLLSASTELRDKLEENTKFFRAALTERGLTIKPGVHPIVPIMIGDAA
                     KSQKFAARMLEKGVYVIGFFYPVVPHGTARVRTQISAAQSREDLEFATNAFAEVNEEL
                     AK"
     gene            1367..2119
                     /locus_tag="VIS53_00060"
     CDS             1367..2119
                     /locus_tag="VIS53_00060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766204.1"
                     /translation="MTYAERRNLALILLAVFIALILLTGCGTTHHALPAYEPPLAKTN
                     FQQVRTTAYTHTESDHRQYGNRNALGGELRAAGPAIHRAEVVTRATLAYEVPRAIPLN
                     ESTSYSPRLQRFSMDEREPVTPGPKRAPRITRAVKRAVVLSRPPQIGSAAADWSRWPA
                     GTVFRLLSTGQNYRVEDYGWALSGRNTIDLYMANQREMNSWGARPETIEILKWGDPQE
                     SLQFLRRHQDYRHIKRMVLELEGREKEAASLR"
     gene            complement(2123..2701)
                     /locus_tag="VIS53_00065"
     CDS             complement(2123..2701)
                     /locus_tag="VIS53_00065"
                     /inference="COORDINATES: protein motif:HMM:NF039346.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766205.1"
                     /translation="MIDPAKLAYVVLLHWEGDENGGMDRFMKEAPESELIGSILSIQL
                     NAIGFGLAERARGFRDGEMLDLGTHKLRFLETPHVHHWDSMMVLDETSRSLFPSDLFI
                     QPADQPPVVTENLSMPMLDLYRAAGIFAHELPIRQVVDRVEKMNLTWVHPMHGGSFEQ
                     SAFPNYARALRENEFAYRGMLLGREIAKVAPM"
     gene            complement(2694..2870)
                     /locus_tag="VIS53_00070"
     CDS             complement(2694..2870)
                     /locus_tag="VIS53_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766206.1"
                     /translation="MGTRIDEIVGDIYRISTWQPQYGITFNQFLIADERPALIHTGMR
                     DLHGTIRNAHSRGD"
     gene            complement(2976..4016)
                     /gene="tdh"
                     /locus_tag="VIS53_00075"
     CDS             complement(2976..4016)
                     /gene="tdh"
                     /locus_tag="VIS53_00075"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013343673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008743 - L-threonine 3-dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006567 - threonine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HEY5766207.1"
                     /translation="MMKAVVKAKREPGLWLDDVPVPEVGGGDVLIRVLKASICGTDVH
                     IYNWDDWAQKTIPVPLTIGHEFAGVVDAVGDNVKGFARGDLVVGEGHITCGHCRNCLA
                     GRRHLCPNTQGVGVNRPGAWAEFVAIPQENCWHADPSISLDVLSCFDPLGNAVHTALS
                     FDLVGEDVLITGAGPIGCMAIPICKRAGARHVVVTDVNPYRLNLAHTMGADLALDVRT
                     EKVADAMQKLGMKEGFDVALEMSGNPKAFADILPNMVHGGKIALLGIMPGSAAIDWNT
                     VVFSALTIKGVYGREMYETWYKMTAMIQSGLDISPVITHRFPYMEFKEAIELMKSGNS
                     GKVVLNWSELSS"
     gene            4197..>4898
                     /locus_tag="VIS53_00080"
     CDS             4197..>4898
                     /locus_tag="VIS53_00080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766208.1"
                     /translation="MKNRHIILGAIFSALAFLPGMQAVVPPPDGCYPNFTTAEGCNAL
                     RSLTTGAANTGVGWYSLFSITTGNANTGVGAGALALNQADNNTAVGGGALFLNTTGEQ
                     NTAVGANALVHNDSGSDNNAFGTNALFSNVEGAFNNAHGRNALTFNTGSENNAFGDLA
                     MENNTSGSSNTAIGDDALRNVVDGSFNVAVGDEAGTAFVSASRNIAIGAPGAGPFADI
                     SNTCFIGSIYNQPVSD"
BASE COUNT         1125 a         1397 c         1298 g         1078 t
ORIGIN      
        1 gatgagcaca agctattttg ccagttcttc attcacttcc gcgaaggcgt tcgtagcgaa
       61 ttccaagtct tcgcgtgact gcgcggcgga gatctgcgtg cggacgcgtg cggtgccgtg
      121 tggaacgacc ggataaaaga agccgatcac gtagacgcct ttctccaaca tgcgcgcggc
      181 gaacttttgt gatttcgcgg catcgccaat catgatcggg acgatcggat gcacgccggg
      241 tttgatggtc aggccacgtt cggtcagcgc agcgcggaag aactttgtgt tttcctcgag
      301 cttgtcgcgc agttcggtcg atgcactgag aaggtcgagc gctttcagcg aagcagcaac
      361 aaccggtggc gcgattgtgt tggaaaatag ataaggccgc gaacgttgcc gcagaagatc
      421 gacaatttcc tttcgcccgc tggtgaatcc gccgctggcg cccccgagag ccttgccaag
      481 cgtgcccgtg atgatatcga tcctgcccat cactccgcga tattcgtgcg tgccgcgtcc
      541 agttttgccg agaaaaccgg tggcgtgcgc gtcgtcgatc atggtcagcg cgttgtactt
      601 ttcggcgaga tcacaaatgg ccgacaggtt cgcaatcgtg ccgtccatcg agaaacaacc
      661 gtcagtggca actaatctga aacgcgcatc ttgcgccgcg cggagttgcg cttccagatc
      721 tgccatgtcg ttgtgcttgt agcgaaaccg ttgcgctttg cagaggcgga tgccgtcgat
      781 gatgctggcg tgattcaatt catcgctgat caccgcgtcc tgttcggtca gcagcgtttc
      841 gaataatccg ccgttggcgt cgaagcagga gggataaagg atggtttctt ctgtcccaag
      901 gaatttcgta agcgaggctt ccagttcctt gtgaatgtcc tgtgtgccgc agatgaaacg
      961 cacgctcgcc atgccgaaac catgcgtgtc gagcgcttct ttggcagcgg caatcagcgc
     1021 gggatgatcg gccaggccaa gataattgtt cgcgcacatg ttcagtacgc gtttgccgcc
     1081 cgtgatcgca atgtgtgcgt cctgcggact tgtgatgacg cgctcggttt taaacagacc
     1141 ctgtgattta atttcttcga gcgtttgaga aagttgtttt gcgaattcag cgaccatagg
     1201 cagcgaaact acaaatcttc tcgctcaaag tccacgacgg acaaaacgag cccgtcagtg
     1261 attgaacgct tgtgtcggtt tgccgctgga ccttgtgcaa atcggaggcc aaaaagttct
     1321 tgccaaattg tgaataactg ttaataactc gcctcggtga tacgccttga cctacgctga
     1381 gcgtcgtaac ctcgccttaa tcctgctggc ggtcttcatc gcccttattc tgcttacggg
     1441 ctgcggcacc acacaccacg cattgccggc gtacgagccg ccgctggcga agacgaattt
     1501 tcagcaggtg cgcacgaccg cgtacacaca cactgaatct gaccatcgcc agtacggtaa
     1561 tcgcaatgca ctcggtggag aattgcgcgc tgcaggtccg gcgattcacc gcgctgaagt
     1621 tgtaacgcgc gcaacgctgg cctacgaagt gccgcgcgcg atcccgttga atgagagcac
     1681 ctcatactca ccgcggctgc aacggttctc aatggatgaa cgcgagcccg tcacacccgg
     1741 tccgaaacgt gcgccgagaa taactcgcgc cgtcaaacgg gccgtagtcc tgtcccggcc
     1801 gccgcagatc ggcagcgccg cagccgattg gtcgcgctgg ccggccggca cagtctttcg
     1861 tctgctctcg accggacaaa actaccgcgt ggaagattac ggttgggcgc tttcaggacg
     1921 caacaccatc gatctttata tggcgaacca gcgtgaaatg aatagctggg gcgcgcgtcc
     1981 ggaaacgatc gaaatcctga aatggggcga tccgcaggag agtctgcaat tcctacgccg
     2041 ccatcaggat tacaggcaca tcaaacggat ggtgctcgag ctggaaggcc gggagaaaga
     2101 agccgcctca ctgcggtaaa gcttacatcg gcgcgacttt cgcgatttcg cgccccaata
     2161 acatcccgcg atacgcgaat tcgttttcac gcagcgctct tgcataatta ggaaaggcac
     2221 tttgctcaaa cgagcctccg tgcatcgggt gaacccatgt gagattcatc ttctcgacgc
     2281 gatcgacaac ctggcggatc ggtagttcgt gcgcaaaaat tccagccgcg cgatataaat
     2341 cgagcattgg catcgacaag ttctccgtaa ccacgggcgg ctgatcggcg ggttgaataa
     2401 acaaatccga cggaaagaga ctgcgcgacg tttcatcgag caccatcatc gaatcccaat
     2461 gatgcacatg cggcgtttcc agaaatcgca atttgtgcgt tcccagatcg agcatctctc
     2521 catcgcgaaa accgcgtgca cgttcagcaa gcccaaagcc gatggcattg agctgaattg
     2581 acaaaatcga cccgatcaac tccgattccg gcgcttcttt catgaatcga tccatcccgc
     2641 cattttcgtc gccttcccaa tgcaacagaa cgacgtacgc cagcttcgcc ggatcaatca
     2701 cctcgcgaat gggcgttgcg aattgtcccg tgcaaatcgc gcatgcccgt gtgaatcaag
     2761 gccggccgct catcagcgat cagaaattga ttgaatgtaa tcccgtactg cggctgccag
     2821 gttgaaatcc tgtaaatatc tccaacgatc tcatcaattc gtgtgcccat tcatttaatt
     2881 ttctcgggag acaatcggcg caagtggaaa gttcgcgcag aacgttcagc ggattaaaat
     2941 gtcgggggat tattcgagag atccttcgac tccgctcagg atgacaattc gctccagtta
     3001 agcaccacct tgccggagtt accggatttc attaactcga tcgcttcctt gaactccatg
     3061 tacggaaaac gatgggtgat gacgggagaa atatcgaggc cgctctgaat catggccgtc
     3121 attttgtacc aggtttcgta catttcgcgg ccgtaaacgc ctttgatggt gagcgcgctg
     3181 aacacgaccg tgttccaatc aatggcagcg ctgccgggca tgatgcctaa caaggcgatt
     3241 ttgccgccgt gaaccatgtt cggcaaaatg tcagcgaacg ctttcgggtt gccggacatt
     3301 tccagcgcga catcaaaccc ttccttcatt ccgagtttct gcatcgcatc ggcaactttt
     3361 tcggtgcgca catcaagtgc aagatccgcg cccattgtgt gcgcaagatt taaacggtac
     3421 ggatttacat cggtgacaac cacgtgacgc gcgccggcgc gtttgcaaat cggaatcgcc
     3481 atgcaaccga tcgggcccgc gccagtgatg agtacgtctt ctccgaccag atcaaacgag
     3541 agcgcagtat gaactgcgtt gcctaacgga tcgaaacagg aaagcacatc cagcgagatc
     3601 gacggatcgg cgtgccagca gttctcctgg gggatcgcca caaattccgc ccacgcgccg
     3661 ggacgattca cacctactcc ttgtgtattt ggacaaagat gccgccgccc cgccagacaa
     3721 ttgcggcagt gtccacaggt gatgtgtccc tcgccgacga cgagatcgcc gcgcgcaaat
     3781 cccttcacat tgtcaccgac agcatcaacg acaccggcaa actcgtgacc gatggtcagc
     3841 ggcactggaa tggttttctg cgcccagtcg tcccagttgt agatgtgcac gtcggtaccg
     3901 catatcgacg ccttcaacac ccggatcagc acgtcaccgc cgccaacttc tggaaccggc
     3961 acgtcgtcca accacagacc cggctcgcgt ttggctttca caacagcctt catcattttc
     4021 tgcacgacat gacactaggc agatcaccga aacgcgaaac atttttgcaa ctcggaatta
     4081 attcatagtc gacaaaacga tttgccatgc gttttagatt gacgcagcga ccccgttttg
     4141 gcaaagcgct ttgcgtactt tgtggccaac caaatcatca aaggagaaat acacttatga
     4201 aaaatcgaca catcatctta ggagcaatct tctcagccct cgcatttcta ccgggaatgc
     4261 aagcagtcgt cccgccgccg gacggatgct atcctaattt cacgacggcg gaagggtgta
     4321 acgcgcttcg ttctctcacc accggtgcgg caaacactgg agttggctgg tattcgctgt
     4381 tttcgattac caccggcaac gccaacaccg gagttggggc cggagcgctg gctctcaacc
     4441 aggcggataa caacaccgca gttggcggtg gagcattgtt tctcaacacc actggcgaac
     4501 agaacactgc cgttggagct aacgcgcttg tccataacga cagcggctcc gacaacaacg
     4561 ccttcggcac aaatgcgctc tttagtaacg tcgaaggtgc tttcaacaac gcacatggtc
     4621 gtaacgcact tacattcaat acgggcagcg aaaacaatgc gttcggtgac cttgcgatgg
     4681 agaacaacac atcgggttcc agtaacacgg caatcggtga tgacgcgcta cgtaacgtag
     4741 ttgacggtag ttttaacgtg gctgtcggtg acgaggctgg caccgctttt gtaagtgcca
     4801 gtcgcaacat cgcaatcggc gcacctggtg caggtccttt tgctgacatt agtaacacct
     4861 gcttcatcgg cagtatctac aatcagccgg ttagcgac
//
LOCUS       DATDAJ010000004         3440 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_25044, whole genome shotgun sequence.
ACCESSION   DATDAJ010000004 DATDAJ010000000
VERSION     DATDAJ010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3440
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25044"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /locus_tag="VIS53_00085"
     CDS             complement(<1..843)
                     /locus_tag="VIS53_00085"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEY5766209.1"
                     /translation="MNGAIYGRTVSLASKQRRRRLVMSFEMVRLDRASSEPLYQQLYR
                     QIREELESGRFDSSTSRVPSSRALAATLGISRPTVNQAFSKLLGEGYFQARKRSGIFV
                     ADHLPASFLKAATPATTVRTEHSSRVARRVIRMTDFRRGPQLDVGIGGPPSVTFVAGL
                     PAVDEFPIAVWERLRAQVLAKKGAHLLRYASSRGEIELRKAIAAYLCDFRGANCHPDQ
                     IVVVGGMQQAMLACALALINEGEVAWIEDPGFRQARNVLAFVGAKLVPRPIDREGLVI
                     GKCPR"
     gene            complement(1152..>3440)
                     /locus_tag="VIS53_00090"
     CDS             complement(1152..>3440)
                     /locus_tag="VIS53_00090"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766210.1"
                     /translation="ESVQVQGPSYSPYFYFQDEDTEHGVWFLDAVTFLNQVREVRDEK
                     AGGFALYRLGSEDPAIWDTLNVPRDFKLDNQTRQALELIKSTDTITDVGDGEIVTVDE
                     DRTDGMRTLALDGDGYLTAKYVKFAQFPTLYHQGAGGEHQVAITFDDGPDPRWTPKIL
                     DILKAANVKATFFVVGVNAERYPALVRRIVNEGHEIGNHTYYHPNLALCWPEHIRLEL
                     NATQLLLETITGRATTLFRPPYAADTGPTELSELAPLKIAEDLNYLVVLENIDPQDWG
                     KPGADIILRRIKQQRHDGSVILLHDAGGDRSQTVEALPRILDWLHTRGDTIVPLSTLL
                     GTTRDAVMPPVQGNGQSLSRIVSSTGFRVYHNIEEFLWAFMIVATALVVVRTLIVIWL
                     AARFRRLPRTNFAQPISVVIAAYNEQKLIAETLRTLLATDYIGEIEVVVVDDGSTDQT
                     AAEIERVAANESRIRLSQQENRGKARALQRGLAASRNGVVVFIDADTQCQRDTLPRLL
                     EPFADERIGAVSGHAKVGNLRTFIARCQALEYICGFNLDRRAYNRWKCITVVPGAISA
                     IRKDAIDEAGGLSLETLAEDTDLTLSLHRHRQRIVYVPGAIAWTEAPETVATLARQRS
                     RWAYGTLQCLWKHRDMVFNWNYRALGWFSLPSIWFFQIILVAVTPMVDLFLLASLPFG
                     VWSAVLPFVITFLAMDVLLATLACILEREPILRAWRILPMRLIYRPMLSYCIWKAILR
                     AIKGAWVSWGKLERTASVPVRA"
BASE COUNT          769 a         1003 c          932 g          736 t
ORIGIN      
        1 ccgtgggcac ttccctatta caagcccctc acgatcgatg ggacgcggga ccagtttggc
       61 gccgacaaac gccaggacat tacgtgcctg acggaagccg ggatcttcga tccatgccac
      121 ttcaccctca ttgattaacg cgagcgcgca cgccagcatc gcctgctgca tgccacccac
      181 gacgacgatt tggtcaggat ggcaattggc gccgcggaag tcgcacaagt aagcagcgat
      241 tgccttccgc agttcgatct cgccacggct cgaggcataa cgcaacaggt gcgctccctt
      301 ttttgccaat acctgcgcgc gcaagcgttc ccaaacagca attgggaatt catcgaccgc
      361 cggcaaccca gcgacgaatg tgacgctcgg cgggccgcca atgcccacat cgagttgtgg
      421 gcctctgcga aagtcggtca ttctgatcac tcgccgggcg acacgtgagg aatgctcggt
      481 gcgcacggtc gtcgccggcg tggcagcctt cagaaaactt gccggtaaat gatcggcgac
      541 aaaaatacca gaccgtttcc gagcttgaaa atagccctcg ccaagcagct ttgagaaggc
      601 ctggtttacg gtgggtctag aaatcccgag agtcgcagcg agagctcgtg aggaaggcac
      661 gcgggacgtg cttgaatcaa acctgccgct ctcgagttct tctcttattt gacgatacag
      721 ttgttggtaa agtggctcgg acgacgcgcg atccaggcgc accatttcaa acgacatgac
      781 taaacgacgt cggcgctgct ttgaagccaa tgagactgtg cgcccgtaga tcgcgccgtt
      841 cattttcacg agccgacttt ctcacccaga gaatgttttc tcaagatgcg atactgcaga
      901 gttcttcgat gcggcgtacc tcaacgccct ttgttcccgc gaacacgcga aactggtcag
      961 cccttttagc gcgatctggt tagttcgacc caaacatgcg cgtcgccgac cacgaccgtt
     1021 ttgcaactcc tcagaatcga cgcagcagcg agtaggaacg ggaaaacgtg catcagtctg
     1081 acaatgatta ggcgaaagtt cataaaaata ccgcgaaaat ttcttcgcca attcacgggt
     1141 gaatcttccg ctcacgctcg caccggcaca ctcgcggtgc gctcgagctt accccagctg
     1201 acccaggcgc ctttgatggc acgcaggatt gctttccaga tgcagtaact aagcatcggg
     1261 cgatagatta ggcgcattgg caggatgcgc caggcgcgca ggattggttc acgttccaaa
     1321 atacacgcga gcgtcgcaag tagcacgtcc attgcaagga atgtgatgac gaacggcagc
     1381 accgcgctcc aaacgccaaa tggcagcgat gccagtaaaa acaaatccac catcggcgtg
     1441 acggccacga gaatgatttg gaaaaaccag atgctgggca aactgaacca accgagagct
     1501 cgataattcc agttgaatac catgtcgcga tgtttccaga gacactgcag cgtgccgtag
     1561 gcccaccgcg aacgttgtcg cgcgagcgtg gccacagtct cgggcgcttc ggtccacgcg
     1621 atcgctccag gtacgtacac gatgcgctgt cggtgtcggt gtaacgagag cgtgagatcg
     1681 gtgtcttcgg cgagcgtttc cagactgagc ccaccggctt cgtcaatcgc atccttccga
     1741 atggcgctaa tcgccccggg caccacggtg atgcatttcc atcggttgta agcacgccga
     1801 tcgagattaa aaccacatat gtattccagc gcctgacaac gcgcgatgaa cgtgcgcaag
     1861 ttcccgacct tcgcatggcc tgacaccgcg ccgatgcgct cgtccgcaaa tggctcgagc
     1921 aaacgcggca gcgtgtcgcg ttgacattgc gtgtcggcat caataaaaac cacgaccccg
     1981 ttgcgcgagg cggcgagtcc gcgttggaga gcgcgcgctt tgccacgatt ttcctgttgg
     2041 gataaacgaa tgcgcgattc gttcgccgct acgcgctcaa tttccgcagc agtttggtca
     2101 gtcgagccat cgtcgacgac caccacttct atttcgccga tgtaatctgt ggccaggagc
     2161 gtgcgcagag tttccgcgat tagtttctgt tcattataag cggcgatcac aacgctgatc
     2221 ggttgcgcga agtttgttct tggcaggcgc cgaaaacgcg ccgccagcca gatgacaatc
     2281 aacgtccgaa cgacaacaag cgccgtcgcc acgatcataa aggcccagag gaattcttcg
     2341 atgttgtggt aaacgcgaaa cccggtgctg ctaacaatac ggctaagcga ctgaccattc
     2401 ccttgcacgg gcggcatgac tgcgtcgcgc gtcgttccga gcaacgtgct caatggcacg
     2461 atggtgtcgc cgcgcgtatg cagccaatcc aaaatgcgcg gaagtgcttc tactgtttgc
     2521 gagcgatcac cgcccgcatc gtggagcagg attacgctac catcgtgcct ttgttgttta
     2581 atccgccgta ggatgatgtc cgccccgggc ttcccccaat cttgcgggtc aatattctca
     2641 aggacaacga gataattaag atcttccgcg attttaagag gagcaagttc actaagttct
     2701 gtcggaccag tgtcggcggc ataaggcggg cgaaacaacg tcgttgcgcg gcctgtaata
     2761 gtttcgagca ataactgcgt agcgttcagc tccaagcgga tatgctccgg ccagcagagc
     2821 gccaggttcg gatggtaata ggtatggttc ccaatctcgt gtccttcgtt cacgatgcgg
     2881 cgaacaagcg ccgggtaacg ctctgcgttt actccgacga cgaaaaacgt agcctttacg
     2941 tttgctgctt tgagaatgtc caagattttc ggcgtccatc gcggatcggg accgtcatca
     3001 aatgtgattg cgacctgatg ctcgccaccc gcgccctggt ggtatagcgt cggaaattgc
     3061 gcaaacttca catatttcgc tgttagatag ccgtcaccat ctaaagccag cgtgcgcatt
     3121 ccgtcagtgc gatcctcgtc cacggtcacg atttccccgt cgccaacatc cgttatggtg
     3181 tccgtcgatt ttattagttc cagcgcttgt cgcgtttgat tatcgagctt gaaatcgcgg
     3241 ggcacgttta gcgtgtccca gatcgccggg tcttcgctgc caagccgata gagtgcgaag
     3301 ccgcccgcct tctcatcgcg cacctcgcgt acttggttga gaaatgtcac ggcgtcgaga
     3361 aaccagaccc cgtgttccgt gtcctcatcc tgaaaataaa aatatggact gtaactcggc
     3421 ccctgaacct ggacgctctc
//
LOCUS       DATDAJ010000005         3886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_28669, whole genome shotgun sequence.
ACCESSION   DATDAJ010000005 DATDAJ010000000
VERSION     DATDAJ010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3886
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28669"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VIS53_00095"
     CDS             <1..201
                     /locus_tag="VIS53_00095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766211.1"
                     /translation="MLIQVGSNETLLDDATRLAARAGTADVAVTLEIWPHMIHAWPLW
                     NAHLEDGRRALARAGSFIRAHL"
     gene            complement(270..794)
                     /locus_tag="VIS53_00100"
     CDS             complement(270..794)
                     /locus_tag="VIS53_00100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766212.1"
                     /translation="MMTRDDFDYALENTRVILAPEHQIATFGSTSFNFYLISEQMDRV
                     NQVRIRNGKIQAERPQILTPEHYCRLLLEGFGDKAERYVDQLREHARSIAVLRYGFQF
                     RKTDLNEQTLTASIDTVINRTRRQVENKNEPLSAIIQGVDDAWEVCLLKFTIDLVERS
                     SGGNLGDFRKRGLL"
     gene            complement(927..1556)
                     /gene="msrB"
                     /locus_tag="VIS53_00105"
     CDS             complement(927..1556)
                     /gene="msrB"
                     /locus_tag="VIS53_00105"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY5766213.1"
                     /translation="MKATRLTYKHKNAYKTLWFGLAGAFVVIAGSILFGYAQAQKQEA
                     EKMNPIKPVPTDAELQEKLTKDQYKVTRQCGTETPFHNAYWDNHKPGIYVDLITGEPL
                     FSSLDKFDSGTGWPSFTKPIKPQNVTEKRDTSYGMERTEVRAKSSDSHLGHLFDDGPA
                     PTGQRFCVNSASLRFVPVEKLKEEGYGEYLSLLQPQQQQLQQGQPQKSK"
     gene            complement(1692..3188)
                     /locus_tag="VIS53_00110"
     CDS             complement(1692..3188)
                     /locus_tag="VIS53_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5766214.1"
                     /translation="MGQTTKEVIPPDETVPPEAATGLRGFIAKFTVLKGAQRELWLTF
                     LIKFLIYTAYSVTNKTMVLWLSKDLGFSDQAAGALVGWVWAPAMTIFTLLAGSITDAI
                     GLRRTFFLGVAICTVARTVMVVTTVPSLALACGVLPLAVGEALGTPVLLAATRRYSTV
                     AQRSISFSIIYMIMNVGYVAAGWIFDYVRQFNFHVSLFGFQPSSYQQLFMVSLVFEIV
                     LFPVIYFLRRGADGPVINQVSRSRDAAGSFLSGIWQTVRQSAVAAAQLFQRLIGQSGF
                     YRLLLFFVFIGFLKAIFLQMDYVFPKFGIRELGANAPVGKLSAINAIVIIFLVPIVGA
                     LTQKFAAYRMVVIGGVICAAGVFIMALPTEWFVSAANGVFGQWLGHAYLGLQGSIHPY
                     YVMSALYLIVFSIGEAFYSPRVYEYAAAIAPPGQEASYGSLAYLPFLVGKLLVGTGGW
                     LLAAYVPEQGPRDAGMMWLIFALAASVAPIGLILFRRYIRVPEAGRQD"
     gene            complement(3271..3678)
                     /locus_tag="VIS53_00115"
     CDS             complement(3271..3678)
                     /locus_tag="VIS53_00115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766215.1"
                     /translation="MFKRLLSPPEQSRAAKTVEIYGWIILLEGGLLLLFPDFMARLMH
                     FGPLTPQASGFLRLVGMLVSGFGMIYVLSGRLNADGFVFATLIDRPFVAPTMAVLWYF
                     GALPGPLALLFAIEDSASWLWTLLTWRAERRRS"
BASE COUNT          937 a         1060 c         1043 g          846 t
ORIGIN      
        1 atgcttatcc aggttggttc taatgagact ttgctcgatg acgccactcg gcttgccgct
       61 cgggccggta cggctgatgt cgcagtaact ttggagatct ggccacacat gattcatgca
      121 tggcctttgt ggaatgctca tctggaagat ggccgtcgtg cgctcgcccg cgcaggctca
      181 ttcattcggg cgcatctatg accaaggaat gacggcttcc cagccgtccg gtgttggatc
      241 gacggctgcc caagccgtcg ttccttgatt tacaacaaac cgcgttttct gaaatcgccg
      301 agattaccgc cagaggaacg ctccacaagg tcgatagtga acttgagcag gcaaacttcc
      361 cacgcgtcgt ctacaccttg tatgatcgcg ctgagcggtt cgtttttgtt ttcgacctgc
      421 cgcctggtgc gattgatcac cgtgtcgatt gaggcggtga gcgtctgttc gttcagatcg
      481 gttttgcgaa attgaaaacc gtagcggagc accgcgatgc tccgcgcgtg ctcacgcaat
      541 tgatcgacgt atcgttccgc cttgtctcca aagccctcca gtagcagccg gcaataatgc
      601 tccggcgtca gaatctgcgg gcgttccgcc tggattttcc cgttgcgaat ccgcacttgg
      661 ttcacacggt ccatctgctc tgaaatcaaa taaaaattaa aactggtact gccaaacgtc
      721 gcgatctgat gctccggcgc aaggatcacg cgcgtatttt caagcgcgta atcaaaatcg
      781 tcgcgggtca tcatcggcgg aacctacctt gcgagtcgcg gtattcgaaa gaaagcatac
      841 acggtgaatg agggaacccg aatgacaaaa tgaactgtag ggcgtctgtg tcagacgcca
      901 aggcgtttca cagaaacgcc ctacaattat ttggacttct gcggttgacc ttgctgtagc
      961 tgctgctgct gtggctgtaa cagcgagaga tattcgccgt agccttcttc ctttaatttt
     1021 tccaccggaa caaaacgcaa cgaggccgag tttacgcaga aacgttgacc agtcggggcg
     1081 ggaccatcgt cgaacaggtg gccgagatgc gaatcgctcg atttcgcacg aacctcggtg
     1141 cgctccatcc cgtaagaagt atcgcgcttt tccgttacgt tctgaggctt aatcggtttg
     1201 gtgaagctgg gccaacccgt tccgctgtcg aatttgtcga gcgaactgaa gagcggttct
     1261 cctgtgataa ggtcgacgta aattcctggc ttgtgattgt cccagtaggc gttgtgaaac
     1321 ggggtttccg tgccgcattg acgcgtcacc ttatactggt ccttggttaa cttctcctgc
     1381 aactcggcgt cggttggaac gggtttaatc ggattcattt tctcggcttc ttgcttctgc
     1441 gcttgagcat atccgaacaa gatcgaaccg gcaatcacca cgaatgcgcc cgctaggcca
     1501 aaccacagag ttttgtatgc gtttttatgt ttgtacgtta atcgcgttgc tttcatccct
     1561 attttctcgg gtgagagttg tccccttttg gcagtgctta ggttcgcaac caatcgcgtc
     1621 cattgaagcg agtgccgcaa aaacctcttc atattaaatt cgcaagtcag acacgaaatg
     1681 gttgggcgca ttcaatcctg ccggccggct tcgggaacgc gaatgtaacg gcgaaaaaga
     1741 attaacccga tcggcgcgac cgatgccgcc aaggcaaaaa tcagccacat catgcccgca
     1801 tcgcgcggcc cctgttccgg gacatacgcg gcaagcaacc acccgccagt gccgacaagg
     1861 agtttgccta cgaggaaggg aaggtacgcc agagaaccgt acgaagcttc ctgtcctggc
     1921 ggcgcaatcg ccgcggcata ctcgtacacc cgcggtgaat agaaagcttc gccgatcgag
     1981 aacacgatca gatagagcgc ggacatgacg tagtaagggt gaatacttcc ctgcaatccg
     2041 aggtaagcgt gccctaacca ttggccgaac acaccgttgg cggcggacac gaaccattct
     2101 gttggcagtg ccataatgaa cactcccgcg gcgcagatga ctccgccgat cactaccatt
     2161 cgataagccg caaacttttg cgttagcgct cctacaatcg gcacgaggaa gatgatcacg
     2221 atggcgttga tcgccgaaag tttcccgact ggagcgttcg cgccgagttc gcgaattcca
     2281 aactttggaa agacgtaatc catctgcaaa aagattgcct tgagaaatcc gatgaaaaca
     2341 aagaatagca gcaaccggta aaatcctgat tgaccaatca atcgttgaaa aagctgcgcg
     2401 gcggcaaccg cgctttggcg cactgtttgc caaataccgc ttaagaaact cccggcagcg
     2461 tctcgactgc gggatacctg attaatcact ggaccgtccg cgccacgccg cagaaaataa
     2521 atgacgggaa acagcacgat ctcgaaaaca agactgacca tgaacaactg ctgatagctg
     2581 ctgggttgaa atccaaagag actgacgtgg aagttgaatt ggcggacgta gtcgaaaatc
     2641 cagcccgcgg cgacgtagcc gacgttcatt atcatgtaga tgatcgagaa cgagatcgac
     2701 cgttgcgcga ctgtggagta gcgccgcgtt gctgccagta acacaggcgt gccgagtgct
     2761 tcaccgactg ccaacggaag aacaccgcag gcaagcgcga gcgatgggac tgtcgtaacg
     2821 accatgacgg tgcgagcaac tgtgcaaatg gcgacgccga ggaaaaacgt gcgacgcagt
     2881 ccgatggcgt ccgtgatgga accggcaagc aaagtgaaga tcgtcattgc cggcgcccat
     2941 acccagccga ccagcgcccc tgctgcttga tcgctgaagc caaggtcctt cgacagccac
     3001 agcaccattg ttttgtttgt gaccgagtag gccgtgtaaa tgagaaactt gatcaggaac
     3061 gtgagccaca actcgcgttg cgctcccttg agcacggtaa acttcgctat gaaaccgcgc
     3121 agacctgtgg ctgcttcggg gggcacagtt tcgtcgggcg ggattacttc tttagttgtt
     3181 tggcccacgg tgcttgaaat tcagttggaa catgtcagcg acaaattcgt tgctgtcgaa
     3241 tagtcgctgc ggtgttgaga cgccgcacgc tcaactgcgt cgccgctcag cgcgccacgt
     3301 cagtaaagtc caaagccagc ttgcggaatc ttcgatggca aataagagcg cgagcgggcc
     3361 gggtaacgcc ccaaaatacc acagtacggc catggtcggt gcgacgaatg gccgatcgat
     3421 caatgtggcg aatacaaagc cgtccgcatt gagacgtcca ctcagtacat agatcatccc
     3481 aaatcctgaa accagcatgc cgaccaaacg caaaaatcca gaagcttgcg gagtcagcgg
     3541 gccgaaatgc ataagcctcg ccatgaaatc gggaaagagc agaagcaacc cgccttcgag
     3601 caaaatgatc caaccgtaaa tctcaacggt ttttgcagcg cgactttgct caggcggcga
     3661 cagaagtcgt ttgaacatgc cgccaaccta ctccgtcatt tcgagcgcag tcgagctgca
     3721 acgtagcccc gaaagatttc ggggcgaggc caggctttcc aatcccgtgg caaaaattgg
     3781 aggtaattca ccgggatcct tcggtttcgc tcaggatgac gatatcgccg cgatcacaat
     3841 agatcttcga ggtacgtttt ccgatcgaac tgcgcgaaat cgtcga
//
LOCUS       DATDAJ010000006         3858 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_37994, whole genome shotgun sequence.
ACCESSION   DATDAJ010000006 DATDAJ010000000
VERSION     DATDAJ010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3858
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37994"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1152)
                     /gene="thiH"
                     /locus_tag="VIS53_00120"
     CDS             complement(28..1152)
                     /gene="thiH"
                     /locus_tag="VIS53_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HEY5766216.1"
                     /translation="MSFTETLDSLALRKSELIERFEHLIAPKSDQELETMAQTSRALT
                     LQNFGRTMRLFAPLYLSNECINNCQYCGFSRDNPILRVTLIVDEVVTEAQHLARQGFR
                     QILLVAGEHPKFVSGDYLAQCVRALSPDFSSISIEVGPMDTEDYVPIVEAGAEGLVVY
                     QETYNRGVYAEMHTAGPKRDFNYRLDCVERGYAAGFRRLGIGALIGLTRWQDEAVALA
                     AHLEHLFKRCWQAQITVSVPRLRPAAGGFHPLFPMNDRELVQLVCALRITFPQVGVVL
                     STRERAPLRDALASMGVTIMSAGSHTEPGGYTRQGREHLHRTVRGRIVAPEYQDGEDQ
                     LATGQFEISDERSAAEIAAVLRHRGLEPVWKDSDQALCGA"
     gene            complement(1250..1951)
                     /locus_tag="VIS53_00125"
     CDS             complement(1250..1951)
                     /locus_tag="VIS53_00125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766217.1"
                     /translation="MKKLLLWLLGPALVASAAFAGVGYSGKEIKQVAPPPCPEWYADR
                     EINVSLWGTYVFTGEEWINDRYIEADHAWGGGLDLKYFFTRYIGLGIEGWVVDARQAR
                     QDIFVDFSDGIFASRVHRESNAIGAVLGTLTLRYPIPCSRFAPYIFGGGGGIFGGGQK
                     RIDQRFVEPGEGFDIVATTGHTDAETRAIGQVGGGMEIRLTPHIGWVSDFSWNFVDGP
                     NNNFGMVRTGVNFAF"
     gene            complement(2089..3663)
                     /locus_tag="VIS53_00130"
     CDS             complement(2089..3663)
                     /locus_tag="VIS53_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY5766218.1"
                     /translation="MIDKVRKILGLPSRKTGNKLVLSVEKLETRVALLEGGRLEEYSV
                     ERKSSRNIVGSVYKGKVKNIEMGLKAMFVDIGFEKNAFLHFWDAIPAALDSGIEEIDR
                     RSNKRPRKRITVKDIPSIYPVGSDVIVQVTKGPIGTKGPRVTTNLSFAGRYLVLMPFS
                     DRSGISRKIEEPKERERLRKVLRQLEIPEGVGVIIRTVGEGQRARYFVRDLRVLLDQW
                     GKVDQAIRDNPSPCRLFEEPDLVERTVRDFLTEEINEIVCDDRGATDRMMDMVSQISR
                     RARNRVRYYDGATPIFETHGVQKQVDDAFHRQVWLKCGGYIVIDETEALVAIDVNTGR
                     NKGGRDVEKTILQTNLEAADEIARQLRLRNIGGLIIADFIDMKSRRDQQAVYNLMKER
                     LKRDKARTHVLPISQLGLMEMTRQRAQESLSDTIYENCPYCGGRGVVKTTMSTSVELH
                     RTLNTVMRRYQDSIHDIRVILNPDVLKRLKEEDEELLVELERRYAGRLMFRADPAFHH
                     EKFVITDANTGAELKA"
BASE COUNT          846 a         1130 c         1001 g          881 t
ORIGIN      
        1 cgcagaccgc cgctacagat gaaattttca tgcaccgcaa agcgcctgat ccgaatcttt
       61 ccaaaccggt tcgagtcctc tgtggcgaag gacagcagcg atttcggcgg cggaacgttc
      121 gtcgctgatc tcgaattggc cggtggcgag ttgatcttcg ccgtcctggt attccggagc
      181 gacgatccgg ccacgcacgg tgcggtgcaa atgttcacgg ccttgccggg tgtaaccgcc
      241 gggctcggta tgactgccgg cgctcattat cgttactccc atcgaggcga gcgcatcgcg
      301 cagcggcgcg cgctcccgtg tgctgagcac gacgccgacc tgcggaaacg tgatgcgcaa
      361 cgcacaaacc aattgcacaa gttcgcggtc gttcatcggg aataggggat gaaatccgcc
      421 tgccgccgga cgcaaacgag gcacgctcac ggtaatttgc gcctgccaac agcgtttgaa
      481 caagtgttcc aagtgtgcag ccagcgcgac tgcctcatcc tgccaccgcg ttagtccgat
      541 gagcgctccg attcccagcc ggcgaaaacc ggccgcatag ccgcgctcaa cacaatcaag
      601 tcgatagttg aaatcgcgtt tcgggccagc cgtgtgcatt tcagcataca caccgcgatt
      661 gtaggtctct tgataaacaa caaggccttc ggcgccagcc tcgacaatcg gcacgtaatc
      721 ttcggtatcc atcgggccga cctcaataga gatcgatgaa aaatccggcg agagcgcgcg
      781 cacgcactga gcgagataat cgccgctcac aaacttcgga tgctcgcccg caacaagtag
      841 gatttggcga aatccctgcc gcgcgagatg ctgcgcttcg gtcaccactt catcgacaat
      901 aagtgtgacg cgcaggatcg gattatcccg cgagaaaccg caatactgac aattgttgat
      961 gcattcgttg gaaagataga gcggcgcaaa gagccgcatg gtccgcccaa aattttgcaa
     1021 ggtgagtgcg cgtgaagttt gcgccattgt ttcgagttct tgatcggatt ttggggcaat
     1081 cagatgctca aagcgctcga tcaactccga ttttctcaga gcaaggctgt ccagtgtctc
     1141 ggtaaacgac atcaggatat tttcgtttgc acaaccaggt tagcaaatct ggcgcgtaca
     1201 aaaaaggcgg cgttcgatat cccagacgcc gcgatagcaa atgctcggtc tagaacgcga
     1261 aattcacgcc ggtgcggacc atgccaaaat tattgtttgg gccgtccacg aaattccagc
     1321 tgaaatcact gacccagccg atgtgcggag ttaagcgaat ttccattcca ccgccgacct
     1381 ggccgattgc ccgcgtctcc gcatctgtat gaccggtcgt cgcgacgata tcgaagccct
     1441 ctcccggttc cacaaaccgt tgatcgattc gcttctgacc accgccaaag atcccgccgc
     1501 cgccaccaaa aatgtatggt gcaaatcgac tgcaaggaat gggataacgc agcgtaagcg
     1561 tgccgagcac agcgccaatt gcgttgctct cgcggtggac cctgctggca aaaattccgt
     1621 cgctgaaatc cacgaagata tcttggcgtg cttgccgagc atcaaccacc cagccctcaa
     1681 tcccaaggcc aatgtatcgc gtgaaaaagt atttcagatc gaggccaccg ccccaggcgt
     1741 gatcggcctc gatatagcga tcattgatcc actcttctcc agtaaataca tacgtgcccc
     1801 aaagcgagac gttgatttcc ctgtccgcgt accactcagg acaaggcggt ggagcaacct
     1861 gcttgatttc cttgcctgaa tagccaaccc ctgcaaaagc ggccgaagcg accaaagctg
     1921 gccctagtag ccataacagc agctttttca tctgtttctc ctcttggtta agtccttcca
     1981 aacaacgttc gccgagtcgg taaacgattt tcgcgccccc atttggatgc cgtgagtctg
     2041 agtcggctcg tctaaaattg caagcttttt gggcgcgcct tgccggcgtc aggccttcag
     2101 ttctgccccg gtattggcgt ccgtaatgac aaatttctcg tgatgaaatg cggggtcggc
     2161 ccgaaacatc agccgaccgg cgtaacggcg ctcgagttcc acaagcagtt cctcgtcttc
     2221 ctcctttaat cgcttcaaaa cgtcaggatt taggattacc cgaatgtcgt ggatggaatc
     2281 ctggtacctg cgcataacgg tattgagcgt ccggtgtaat tccacgctcg tgctcatcgt
     2341 cgtcttcaca acgccccgcc cgccgcaata aggacaattt tcataaatcg tgtcactcag
     2401 gctctcctgc gccctttgcc gcgtcatctc catcagaccg agttgtgaaa tgggaagcac
     2461 atgcgttctg gctttgtcgc gcttcagccg ttccttcatt aaattgtaaa ccgcctgctg
     2521 atctctgcgg ctcttcatgt cgatgaagtc agcaatgatc aatcccccga tgttgcgtaa
     2581 tcgaagctgg cgcgcgatct cgtccgccgc ttcgagattg gtttgcaaga ttgttttctc
     2641 gacgtcgcgc ccacctttgt tccgtccggt gttcacatcg atagcgacca aagcttcggt
     2701 ctcgtcgatc acaatatagc cgccgcactt gagccagact tgcctatgaa atgcgtcatc
     2761 aacctgtttc tgcacaccat gagtctcaaa aatcggtgtg gcgccatcgt agtagcgaac
     2821 acggtttctc gcgcgacggg agatttgact gaccatgtcc atcatccgat ccgttgcccc
     2881 gcgatcgtcg cagacgattt cattgatttc ttcggtaaga aaatcgcgga ccgtgcgctc
     2941 gaccagatcg ggttcttcaa acagccggca cggggagggg ttgtcccgaa tggcttgatc
     3001 gactttgccc cactgatcca gcagaactcg caaatcgcgg acaaaatatc tggcacgctg
     3061 accttcgccc actgtccgga tgatgacgcc aaccccttcg ggaatttcca actgccgcag
     3121 aaccttgcgc agtcgctcgc gttctttcgg ctcttcaatt tttcgagaga taccgctgcg
     3181 gtcgctgaat ggcatcagga ccaaataccg tccggcgaaa ctgagattgg ttgtgacgcg
     3241 cggccccttg gtaccgattg ggcctttggt gacctgcaca atcacatccg agccgaccgg
     3301 gtaaatactc ggtatgtctt ttaccgtgat ccgttttcga gggcgcttat tagaccgtct
     3361 gtcaatttct tcgatgccgc tatcgagcgc cgcgggaatg gcgtcccaga aatgaaggaa
     3421 cgcattcttt tcgaagccga tgtcaacaaa catcgccttc aatcccatct cgatgttttt
     3481 gactttaccc ttgtaaacgc tgcctacgat gttccgtgag ctcttacgct caacgctgta
     3541 ttcctcaagt cggccaccct cgagcaaagc cacgcgggtc tcgagtttct ctacgctcag
     3601 aacgagcttg ttgccggtct tgcgtgaagg aagacccaaa atctttctca ctttgtctat
     3661 cataaaaatg gaggggttgg ccggtcatca gccgagctgc cgatacgagc tgcgggggcg
     3721 attctgaccg aaggttcatc ttgtggtatt gcgctgcttc cgcccgggcg gcggcggtgg
     3781 aggcggtgcg ggctggcgct taactccgaa aagccgctga aaaaagttgc gctgaggctg
     3841 aggcgccgca accgggac
//
LOCUS       DATDAJ010000007         3434 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_38543, whole genome shotgun sequence.
ACCESSION   DATDAJ010000007 DATDAJ010000000
VERSION     DATDAJ010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3434)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3434)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3434
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38543"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2429
                     /locus_tag="VIS53_00135"
     CDS             <1..2429
                     /locus_tag="VIS53_00135"
                     /inference="COORDINATES: protein motif:HMM:NF014516.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766219.1"
                     /translation="SRISALEEELTGTKARRKLTHAQVEQLLKEIEALAKAREELAGQ
                     IAVSLKVAPRQPLDVETSLREKEKLLAQAEQDLAALHRTLAEKRSRLEVLRQLNEEGE
                     GLAEGSQALLKGVNGSAEFRDAITGSLVAQLEVDPKFIQAIEAALGRNLHAIVLKDAN
                     VVSEIIGHLKKKKLGYAALLILKLTAAAPQTSQKVLPSEALAWATDKVRTPKPLEALV
                     TRLLGDIVIFPELEQALEYKKVEPALAMATLAGEYVSREGIVFTGSSEARASSLLERK
                     AQIADLAKEEAALAEEHDSVSAKRDDAKTALETAARLQRELSETGRKIDTLQSEKTAL
                     ERQIATADERLAHVERDLQAGRDQLANQETDLAAFEAAQKKTMLREEALTARTNELQL
                     SVATDRQRHENLIAQREPMSARDAELAELISVREADIAMYERKLAAQAEESRESERII
                     NTQTAQRDEAQTNSAKIAEQRATRLTAISDGESELRRVRDSLGELQDRRAQRQVRESQ
                     FQMKIDNLLAHISRSYQIDLRGFAPDEAAFGKTWRALVKRNEKVDGGTPATPDSAEFI
                     SPDLEKLIADLRKQLDNMGPVNLEAVHEYDELEERYKFLETQNTDLTNSQRELLDVIA
                     RINSTTRKLFADTFEQVRTNFREMFGELFRGGRADLSLLDENDTLNCGIEITAKPPGK
                     QLQSVSLLSGGERAMTAVALLFAIYMVRPSPFCILDEVDAALDENNINCFIGVLDRFV
                     QQSQFIIITHNKRTIAKADVLYGVTMEERGVSKLVGVKLTAPVQPVTEPASNGGAQVP
                     TQRRLAFAAR"
     gene            2573..>3434
                     /locus_tag="VIS53_00140"
     CDS             2573..>3434
                     /locus_tag="VIS53_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY5766220.1"
                     /translation="MLQTARQTAKLKRKKRAPASLGEAAAEKTAPPHERFLEAFRWML
                     LARTLEEKLVSLYRGGQITGGVYIGKGQEAVSVACGLFLVKGDIFAPLIRDQAGRSAF
                     GEPLVDVTRTYLGSRLGPMRGRDGNIHRGHPRDNELAMISHLGAMVSVTVGTLMAKRF
                     KGDKDFVGLTCIGEGGMQTGAFHEGMNIAAVEQVPLVVVATNNHYAYSTPNDREFACD
                     DLMERAIGYGFEGYSLDGTDLAACLDVIGGAVKRARAGRPPQLVVASVLRLSGHGEHD
                     DASYVSEEMKQ"
BASE COUNT          856 a          936 c         1010 g          632 t
ORIGIN      
        1 aaagccggat ctcggcgctc gaagaggaac tcactggaac caaagcgcgt cgtaaattga
       61 ctcacgcaca agttgaacaa cttctaaaag agatcgaagc gttagctaaa gcgcgcgaag
      121 aactcgccgg gcaaatcgcg gtgtcgctga aagtcgcccc tcgtcaaccg cttgatgtcg
      181 agaccagcct tcgcgaaaag gaaaaactgc tcgctcaagc ggaacaggac cttgcggcgc
      241 tccatcgcac actcgccgaa aagcgatcac gcctggaggt gttgcgtcaa ctgaacgaag
      301 agggcgaagg cctcgcggaa ggttcgcagg ctctactcaa gggcgtcaac ggctccgcag
      361 aattccggga cgcgattacc ggttcgctcg ttgcgcaact ggaagttgat ccaaaattca
      421 tccaggcgat cgaagccgcg ctaggccgta atctgcacgc cattgtttta aaagatgcga
      481 acgttgtttc cgaaataatt ggtcatctaa agaaaaaaaa gctgggatac gccgcgctgc
      541 tgatcctcaa gctgacggcg gcagcgccgc aaacgtcgca aaaagttttg ccatcggagg
      601 cgctcgcgtg ggccactgac aaggtgcgta caccgaaacc gctggaagca ctcgtcacgc
      661 gattgctcgg cgacatcgta atttttccgg aactcgaaca ggcgcttgag tacaaaaagg
      721 tagaacctgc tctggcgatg gccacgctcg ccggcgaata tgtttcccgg gagggaatcg
      781 ttttcacggg aagtagcgaa gcccgcgcgt cctccttgct cgaacgcaaa gcgcagatcg
      841 ccgatttggc aaaagaagaa gctgctttgg cagaagaaca cgattcagtc tccgccaagc
      901 gggacgacgc gaaaaccgct cttgaaaccg ctgcacggct tcagcgcgaa ctgagcgaga
      961 ccggacgcaa gatcgacact ttgcaatcgg aaaaaaccgc tttggagcgc cagatcgcga
     1021 cggccgacga acggctcgcg cacgtggagc gggatcttca agcggggcgc gatcaattgg
     1081 ccaatcaaga gaccgactta gcggccttcg aagccgcgca gaaaaagacc atgctgcgcg
     1141 aggaagcgct aaccgcgaga accaatgaac tgcagttgag cgtcgcaacc gatcgccagc
     1201 gccatgaaaa tttgattgcg caacgcgaac caatgagcgc acgcgatgcc gagctggccg
     1261 agttgatctc agtgcgcgag gcagacatcg cgatgtacga acgcaaatta gctgcgcagg
     1321 ccgaggagtc gcgtgaatct gaaaggataa tcaacactca aacggcgcag cgtgacgagg
     1381 cacaaacgaa cagcgcaaaa atcgccgagc agcgcgccac acgacttacc gcgatttccg
     1441 atggggaaag cgaactgcgg cgtgtgcgag actcgttagg cgaattacag gatcggcgcg
     1501 cacagcggca agtccgggaa tcgcaattcc aaatgaagat cgacaatctc ctcgcgcata
     1561 tttcccgcag ctaccagatc gatcttcgcg gtttcgcacc tgatgaagcg gcgtttggca
     1621 agacgtggag agccctagtg aagcgcaacg agaaagtgga cggcggaact cctgcgacgc
     1681 cggactcggc ggagttcatc tctccagatc tcgaaaaatt gatcgccgac cttagaaaac
     1741 agctggacaa catgggacca gtgaacctcg aggcggtgca cgagtacgac gaactcgagg
     1801 agcgttacaa gttcctcgaa acgcaaaaca ccgatcttac gaattcccag cgcgagctgc
     1861 tagacgtgat cgcgcgcatt aattccacaa cacggaaact atttgccgac acctttgagc
     1921 aagttcggac gaatttccgg gaaatgttcg gcgagctatt ccgtggcgga cgcgcggact
     1981 tgtcactgct ggatgagaac gacacgctga actgcggcat cgaaatcacg gccaagccgc
     2041 cggggaaaca attgcaaagc gtgtcgctgt tgagcggtgg cgaacgcgca atgacggccg
     2101 tcgcgttgct gtttgcgatt tacatggtac gcccaagtcc gttctgcatt cttgatgaag
     2161 tggacgcggc tctcgatgaa aacaacatca actgcttcat cggcgtgctc gaccgcttcg
     2221 tacagcagag ccaattcatt atcatcacgc acaacaaacg gacgatcgct aaagctgatg
     2281 tcctgtatgg cgtgacgatg gaagaacgcg gcgtcagcaa attggtcggc gtcaaactga
     2341 ctgccccggt gcaacctgtc actgaaccag cttcaaatgg cggggcacaa gtgccgacac
     2401 agcgccgcct cgcgttcgcc gcacgttagt agcacaggca tcttgccttg cgtggcaggc
     2461 gggcttctag cctgctgaac ctcaatggag ttctaaaagg cagaagagat gccgagcttg
     2521 tccgccacaa aaaactttgc gcgcagttgc cgatcttggc taaaatgacg cgatgcttca
     2581 aacggcgcgg cagaccgcaa agttaaaaag aaaaaagcgt gcgcccgcat cgctgggcga
     2641 agctgctgcg gaaaaaaccg cgcctcccca cgagcgtttt ctggaagcgt ttcgctggat
     2701 gctgctggcg cgcacgctcg aggaaaagct cgttagtctc taccgcggcg gtcagattac
     2761 gggcggcgtt tacatcggta agggccagga agcggtcagc gtcgcatgcg gtttgttttt
     2821 ggtaaaaggc gacatttttg cgccgttgat tcgcgaccag gcggggcgat ccgcattcgg
     2881 cgaaccccta gtcgacgtta ctcgcacgta tctcggctcg cgcctgggtc cgatgcgtgg
     2941 gcgcgacggc aatattcatc gagggcatcc gcgcgataac gaattggcca tgatcagtca
     3001 tctcggcgca atggtttcag tgaccgtcgg cacattgatg gcgaagcgat tcaaaggaga
     3061 taaagatttc gtcggcctca cgtgcatcgg cgaagggggg atgcaaaccg gagcgtttca
     3121 cgaaggaatg aacattgccg cggtggagca ggtgccgctc gtagtggtcg cgacaaataa
     3181 tcattacgcg tactcgacgc ctaacgaccg cgaatttgcg tgcgatgatc tgatggaacg
     3241 ggcgattgga tacgggttcg aaggttatag tctggacgga accgatcttg ctgcgtgcct
     3301 cgatgtaatt ggcggtgcgg tcaaacgcgc gcgtgcaggg cggccgccgc agttagtcgt
     3361 tgcctcggta ctgcgacttt ccggtcatgg cgaacacgat gacgccagct acgtgtccga
     3421 agaaatgaag cagc
//
LOCUS       DATDAJ010000008         6979 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_38951, whole genome shotgun sequence.
ACCESSION   DATDAJ010000008 DATDAJ010000000
VERSION     DATDAJ010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6979)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6979)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6979
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38951"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VIS53_00145"
     CDS             complement(<1..180)
                     /locus_tag="VIS53_00145"
                     /inference="COORDINATES: protein motif:HMM:NF023069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA N-terminal domain-containing protein"
                     /protein_id="HEY5766221.1"
                     /translation="MDKKCAQLWQRLSAALKPHISADSFKRWFSTVELVEAKEKSITL
                     TVPNNIYQLWIESNYM"
     gene            complement(200..454)
                     /locus_tag="VIS53_00150"
     CDS             complement(200..454)
                     /locus_tag="VIS53_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766222.1"
                     /translation="MFEKLPAARMNKTESSAPERLIAGAPKRRGKQTLHDTSRHFPSY
                     LPLFGNFFAPLIAESHWGAARLLADCCGRFPTVQTHVAFL"
     gene            784..1377
                     /locus_tag="VIS53_00155"
     CDS             784..1377
                     /locus_tag="VIS53_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766223.1"
                     /translation="MQATDTDTTGRVSMCVTRPNQQIIRHFFLIGLITFFVLFAQHSR
                     AADELVPPFGFRWNDSMARVEAVLHGAKAKLVSREKKENREVWTVEGLIHPGLKRTAF
                     TFKQRALVAVELQYEYPDWSIERYNQRMGEIRKYFDEKYGTGKLVSRSRDHDTEVIQT
                     LVGYQWMVGTTMLELFYFSAQHDNLVYRTISVDYKAL"
     gene            complement(1424..2536)
                     /locus_tag="VIS53_00160"
     CDS             complement(1424..2536)
                     /locus_tag="VIS53_00160"
                     /inference="COORDINATES: protein motif:HMM:NF010039.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HEY5766224.1"
                     /translation="MKDHTFTLGIEEEFAIIDPETRELRSHIHEILEGGKIMLKEQIK
                     PEMHQSVVELGTEICDSIGCARDHVIALRTKLAELAARSGLKIASMGTHPFSHWRDQL
                     ITEGERYQEILKDMQSLARANLIFGLHVHVGIPDRETAIHVMNQARYFLPHIYALSVN
                     SPFWVGQNTGLKGYRLKVFERFPRTGIPDSFESLSEYEDYCKLLVKTGCIDNAKKIWW
                     DIRLHPFFDTLEVRVCDAQSRVDDTLAIAALIQAVISKLHKLLHQNITFRIYRRRLLD
                     ENRWRAARYGIEGKLIDFGKEAEVDERSLLNELLNFVSTEVKELGSEREMAHIERILR
                     EGTGADRQLATWERTQDMKAVVDHIVVETYDGLSLP"
     gene            complement(2683..3648)
                     /locus_tag="VIS53_00165"
     CDS             complement(2683..3648)
                     /locus_tag="VIS53_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766225.1"
                     /translation="MKKIGILFGQEQSFPPAFVDRVNQKTGGKDIAAEFVKIDKVIQG
                     EPCGYDVVIDRISQDVPFYRAWLKNAALTGTAVVNNPFWWSADEKFFNNALATKIGVA
                     VPRTVLLPSNQPPPDTNDKSFRNLGYPLDWEGIFSYIGWPAFFKPFAGGGWKNVYRLH
                     NREEFFRAYNDTEQLVMMLQEEVKFDMYFRCYSIDQRHVRIMPYEPRNPFHLRYRTEW
                     HAPKEILQKVEEGVLRLNQFLGYDLNTVEFAMRDGVPVAIDFCNPAPDCEAAWIGQDN
                     FEWVVEAVAEMAIRKAREHVPGRDNLSWGKFLQAAVTQRSLGEVV"
     gene            3891..4271
                     /locus_tag="VIS53_00170"
     CDS             3891..4271
                     /locus_tag="VIS53_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5766226.1"
                     /translation="MVKKLLHTRYRVHDLEKTISFYRDVLGLQEVRRHTSGRGSQLVF
                     LKAPGSEEEIEICKFDGSGPIIVGPDLTHLAFEVDDLDKFAKHAAAKGHPLSDGPHST
                     NGGRIAFIDAPEGYEVELIERGKK"
     gene            4428..5447
                     /locus_tag="VIS53_00175"
     CDS             4428..5447
                     /locus_tag="VIS53_00175"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEY5766227.1"
                     /translation="MIWRNRIWFLCALMLSSALTARAQDIVDSDLVRPSGVNGPVRKA
                     KAVTQKSADNETESAAPKAKKSKSSHARSHRARAKSKEAPDTISAPTEFTPDGIPKTS
                     AASVIIVDANSGRILYEKNADQVRPPASTQKLLTALIVAETGFLDRPVTVQSVDTMCD
                     PVKLGIKSGETYQRIDLLRALLVKSPNDVARCLARDNAGSVEAFAQMMNRRALQLGAV
                     HSHFVNPNGLPAPGQYSSARDLALIARAAYANPTIRSIVCLPQLVFRYSNGRTRELEN
                     TNKLLRRLPYCNGMKTGYTDAAGKCLIASGTRPGKDVIAVVLGDSSSKIWRDASALLS
                     WGLLL"
     gene            complement(5450..5522)
                     /locus_tag="VIS53_00180"
     tRNA            complement(5450..5522)
                     /locus_tag="VIS53_00180"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5487..5489),aa:Thr,seq:cgt)
     gene            complement(5672..6442)
                     /locus_tag="VIS53_00185"
     CDS             complement(5672..6442)
                     /locus_tag="VIS53_00185"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5766228.1"
                     /translation="MTLAWLGHSTVLINFFGVTILTDPALFPRVGIRLPGITIGPKRL
                     TAPALRFADLPQIDLILLSHAHFDHLDLRTLGCFDETTRVITARATRDLLKGTRFSNI
                     TELDWDETKTLSAAAGEMAVAAFPVKHWGARTQHDTHRGYNGYLIERKGRRIIFAGDT
                     AMTDSFAALRRHGPIDIAIVPISAYNPWIQAHSTPEQAVQMANAAGARFVVPVHHQTF
                     RLSFEPFREPIERFEAALSKTPERIALREIGETFVLPL"
     gene            complement(6678..>6979)
                     /locus_tag="VIS53_00190"
     CDS             complement(6678..>6979)
                     /locus_tag="VIS53_00190"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5766229.1"
                     /translation="GTNLRRQKRELDRLGVSAEVRLRHGIVIDQVFEEARDGNYDLIV
                     TGTSQARGLFRHYIMGDLTRDILNRSNMPVLVARAGPPKPARTLWKALKGLFGKP"
BASE COUNT         1611 a         1877 c         1917 g         1574 t
ORIGIN      
        1 catgtaatta ctttcgatcc agagctggta aatgttgttc ggaacagtca gcgtgatcga
       61 tttctccttt gcctccacta actcgacggt agaaaaccag cgtttaaaac tatccgcgct
      121 aatgtgtggc ttgagagcgg ccgacaatcg ctgccagagc tgcgcgcatt tcttgtccat
      181 agagaagttg ttaacagtgt tacagaaatg ccacatgggt ctgtaccgtc ggaaatcgtc
      241 cgcagcagtc cgccaataat cgagctgctc cccagtgtga ttcggcgatc aacggtgcga
      301 aaaagttgcc aaaaaggggt aaatacgagg gaaaatgcct ggatgtgtcg tgcagtgtct
      361 gtttaccacg acgcttgggc gcacccgcaa ttaatcgttc tggcgcggag ctttcggtct
      421 tgttcattct tgctgccgga agtttttcaa acatgttcac aacttattca cacacgcttt
      481 gtggtcgtcc tcgccagcgg gcttgagact agaaatcagt tgcgaaagcg acaagaaaaa
      541 aatgaattta attttcaatt tcggcaaaaa aattttcttg actgcgaaaa tgaagcgcgc
      601 gtgtcgtcgc gggaacaaga aacagcgtgt ttaaaagaat ttcgtgagcc gccgtgacgg
      661 attttgaatt gccgcacgaa cacttcgctg ctgattggct gcgcatccga agttgaccga
      721 atccatctgt acgcgcaatt tctcggctct gtgagcgaag cgtaaacgct ctgcaaatta
      781 tagatgcagg caaccgatac cgataccacc gggcgtgttt cgatgtgcgt tactcgtccg
      841 aaccagcaga tcatccgcca tttttttttg attggcctga tcaccttttt tgttcttttc
      901 gcgcaacact cccgtgccgc tgatgaattg gtgccgccgt tcgggtttcg ttggaacgat
      961 tcgatggctc gggtagaggc ggtgctgcac ggcgcgaaag ccaagttagt ttcgcgtgaa
     1021 aagaaagaga accgcgaggt ttggactgtg gaggggctga ttcatcccgg actcaaacgc
     1081 actgcgttta cgtttaaaca gagagcgctt gtggcggtag agttgcaata cgaatacccc
     1141 gactggtcga tcgaacgtta caaccagcgg atgggagaaa ttcggaaata cttcgacgaa
     1201 aagtacggca ctggaaaact ggtgtcacgt tcccgcgacc acgataccga ggtgattcaa
     1261 acactggtcg gatatcaatg gatggttggg accacgatgc tcgagctgtt ttatttctca
     1321 gcgcaacacg ataacctcgt ttaccggacg atttctgtgg attacaaggc gctgtgaacc
     1381 cgcaacgcgt tttgtagcga agccgacgtg tcagtcggag tgactagggc aatgataagc
     1441 cgtcgtacgt ctccacgacg atatgatcta cgactgcttt catgtcctgc gtgcgttccc
     1501 acgtcgcgag ctgccggtcc gcgccggtgc cctcgcggag gattcgctcg atatgcgcca
     1561 tttctctctc gctgccgagt tccttaacct cggtcgagac gaagttgagc agttcgttta
     1621 acaggctccg ttcatccact tcggcttcct tgccgaagtc gatcaatttg ccctcgatgc
     1681 cgtagcgggc ggcgcgccag cggttctcat caagaagacg tcgccgataa atccgaaacg
     1741 taatgttttg gtgcagcagt ttgtgaagtt ttgaaattac ggcctggata agtgccgcga
     1801 ttgcgagcgt atcgtccacg cgcgattgcg catcgcacac gcgcacttcc agcgtgtcga
     1861 agaacggatg caaccggatg tcccaccaga ttttcttggc attgtcgatg caaccggtct
     1921 taaccagtag cttgcagtaa tcctcatatt cagagagcga ctcgaacgaa tccgggatgc
     1981 cggtccgggg aaaacgctcg aatactttaa ggcgataacc tttcagtccc gtgttttgac
     2041 ccacccagaa cggggagttg acggacagcg cgtatatgtg cggcagaaaa tagcgagctt
     2101 gattcatcac gtggattgcc gtctcccgat cgggaatgcc gacgtgcaca tgcaatccga
     2161 aaatcagatt cgcgcgcgcg agcgattgca tgtccttgag gatttcctgg taacgctcgc
     2221 cttcagtgat gagttgatcg cgccagtgcg agaacggatg cgtccccatc gacgcgattt
     2281 ttaatccgct ccgcgccgcc aattccgcca gtttcgtgcg cagcgcaatg acgtgatcgc
     2341 gcgcacaacc aatggaatcg caaatttcgg tgcccaactc gacgacggac tggtgcatct
     2401 ccggtttgat ctgctctttg agcatgattt ttccgccttc gagaatttcg tgaatatgcg
     2461 aacgcagttc gcgcgtttcg gggtcgatga tggcgaactc ctcttcaatt cccaaagtga
     2521 acgtgtggtc cttcatgcga tacccaggaa aaacatccgc agatttcgta aatttacaca
     2581 gattatttct gaaaggtagg gcgggcagtc ctctgcacgc cggagtggcg agccctacca
     2641 aagaaacgaa atgattaccc cgccgtagct cggcggaaac ggttatacga cttcgcccaa
     2701 cgaccgttgc gtcaccgcag cttgcagaaa cttgccccag cttagattat cgcgaccggg
     2761 aacgtgctcg cgcgccttgc gaatggccat ttcggcgact gcttccacca cccactcgaa
     2821 gttgtcctga ccgatccacg ccgcttcgca atcaggggcg ggattgcaaa agtcgatagc
     2881 aaccggcacg ccgtcgcgca tggcgaattc cacggtgtta aggtcgtaac cgagaaattg
     2941 attcaatcgc agaacgccct cctcgacctt ttgcagaatt tccttcggcg catgccattc
     3001 cgttcggtaa cgcaaatgaa agggattccg tggctcgtag ggcatgatcc gtacgtgacg
     3061 ctgatcaatc gagtagcagc ggaaatacat atcgaacttg acttcctcct gtagcatcat
     3121 caccaactgt tcggtgtcgt tgtaagcgcg gaagaattcc tcgcgattat gcaatcgata
     3181 gacgtttttc cagccgccac ccgcaaacgg tttgaaaaac gcgggccagc ctatgtaact
     3241 aaaaatccct tcccaatcga gaggatagcc gagatttcga aacgatttgt cgttcgtatc
     3301 tggcggcggc tgatttgatg gaagcaacac cgttcgtgga acagcgacgc cgatttttgt
     3361 ggccagcgcg ttattgaaga atttttcatc cgcgctccac caaaacggat tgttcactac
     3421 ggcggtgccg gttagcgcgg cgttcttgag ccaggcgcga tagaacggca cgtcctgcga
     3481 aattcgatcg attaccacat cgtatccgca cggttcgccc tgaatcactt tgtcgatctt
     3541 cacaaactcc gcggcaatgt ctttgccgcc ggttttctga ttcacccgat cgacaaacgc
     3601 cggcggaaaa ctctgttcct gtccaaaaag tattccgatt tttttcatag gtgcgctgct
     3661 gtcatttcga gcgaagccgg aggcgaagtc gagaaacctc tcgaatttcg gacctcagca
     3721 agagatgtct cgacttcgct cgacatgaca acaaaccagt cgggtcgtgg actctcattg
     3781 acaccacggc ttcgagcccg gtgtacttcg cgaggagcgc aatgaagccg ttttaacggg
     3841 tttgtccaga gggctgtttg aatcgacccg ctcaagcaat aagatagacc atggtcaaga
     3901 aattattgca cacgcgctat cgcgtgcacg acttggaaaa gaccatttcg ttctataggg
     3961 acgtcctcgg tctgcaggag gttcgtcgcc atacctccgg gcgcggatca caactcgtct
     4021 tcctgaaagc accgggcagc gaagaggaaa ttgagatctg caaattcgac gggagcggcc
     4081 cgattatcgt cgggcccgat cttacgcatc tcgcattcga agtcgacgat ttggacaagt
     4141 ttgccaaaca cgccgcggca aaaggccatc cgttgtcgga cggaccacat tcaacgaacg
     4201 gcggtagaat tgccttcatt gacgcaccgg aaggctatga ggtcgaactt atcgagcgcg
     4261 gtaagaaata atattttgca cgcaaccctg ccaggcatct gctctagatg ccctgcaaaa
     4321 cgcacctcga agaacgactt gtgactctcg ggcggcgtcc acgctcgcaa cgcatatgca
     4381 gcggaggcac ttgcgcaggc caacgttttg tccgtaatta gccgtccatg atttggcgca
     4441 atcgaatttg gttcctttgc gcactgatgc tgagctcagc gctgaccgcg cgggcacagg
     4501 atatcgttga ttctgatctt gtccggccga gcggtgttaa cgggcctgtt cggaaagcaa
     4561 aggccgtaac gcaaaaaagt gcggataacg agaccgaatc cgccgctcca aaagccaaga
     4621 aatccaagtc gagtcatgct cggtcgcacc gcgcgcgcgc aaaatcgaaa gaagcgccgg
     4681 atacaatttc cgcgcctacc gagttcacgc ctgacggcat accgaagacc agcgcggctt
     4741 cagtgatcat cgtggacgcc aatagcggca ggattttata tgaaaaaaac gcggatcagg
     4801 tacgaccgcc ggccagcacg caaaagttgc tgactgcgct gattgtggca gagacgggtt
     4861 ttctcgatcg gccagtgacg gtgcagtcgg tggatacaat gtgtgacccg gtgaagctgg
     4921 gaataaaatc gggcgagact tatcagcgga tagatctttt acgggccttg ttggtgaaaa
     4981 gtcccaatga tgttgcacga tgtctggcgc gagacaatgc cggaagcgtc gaggcatttg
     5041 cccagatgat gaatagacgc gcactgcaac ttggagctgt gcattcacac tttgtgaatc
     5101 caaatggtct gccggcgccg ggacaatatt caagcgcccg cgatctcgcg ctcatcgccc
     5161 gcgccgctta cgcgaacccg accatccgct ccatcgtctg tcttcctcag cttgtcttcc
     5221 gttattcgaa tgggcgcacg cgcgagcttg aaaatacaaa caaactttta cgacgcctgc
     5281 cgtactgtaa cggcatgaag accggttaca ccgacgctgc gggcaaatgc ctgatcgcca
     5341 gcggaacgcg tccgggtaaa gacgtaatcg ctgttgtgct gggcgacagc tccagcaaga
     5401 tctggcgcga cgcctccgcg ctgctgtcgt ggggactgtt attgtaaaaa gccgacgacg
     5461 ggattcgaac ccgtgaccta cggtttacga aaccgttgct ctaccagctg agctacgtcg
     5521 gcgggaagcg gccaaaacat tgcatccagc gacaattcac acaagcgcgc actgtagtcg
     5581 cttcgctgtg cgaagcgata gagaacgcgg cgcgtaacag gctatacgtg ggctgctccg
     5641 acgctgagcg aacgcgtctc acgagacgcg gctacaaagg cagaacgaag gtctcgccaa
     5701 tttcccgtag cgcaattcgc tcaggagttt tacttagcgc ggcctcgaag cgctcgatcg
     5761 gttcgcggaa gggctcaaag ctgagccgga acgtctggtg gtgaaccggg acaacaaagc
     5821 gagcgcctgc ggcatttgcc atctgaactg cctgctccgg cgtgctgtgt gcttggatcc
     5881 acggattgta ggcgctgata ggcacgatgg cgatgtcgat tgggccgtgt cgccgcagcg
     5941 ctgcgaagct gtcggtcatt gcggtgtcgc cggcgaaaat aattcggcgt ccctttcgtt
     6001 cgattaaata tccattgtac ccgcggtgtg tgtcatgctg cgtgcgcgca ccccaatgtt
     6061 tcacgggaaa cgcggcgact gccatttcgc ccgcagcagc gcttaaggtc ttggtttcgt
     6121 cccaatcaag ttccgtgatg ttggaaaagc gggttccttt caataaatcg cgcgtggcgc
     6181 gcgcggtgat cacacgtgtg gtttcatcaa aacaaccaag tgttcgcaga tcgagatgat
     6241 caaagtgcgc atgcgacaga aggatgagat cgatttgcgg caggtcagca aaccggagcg
     6301 caggggcagt caggcgtttc ggcccgatgg taatacctgg caaccgaatt ccgacgcgcg
     6361 gaaaaagcgc agggtcggta agaattgtga caccgaaaaa attaatgagc accgtggagt
     6421 gccctagcca tgcaagtgtc acctgtgtat cactccattt cgacggcgcg gggcgcgcaa
     6481 agggcggcgc gattcgccgc cagctttcaa ttgtccattc cctgaataga tggccgagcc
     6541 agcggcgcac tcgggatccg cgcgggactg gttgttgcgg tgcgtgcacc cggaaaccta
     6601 acacagctat catggctgca gggtcagccg gctggaagcc tgcacgacga atcaggtagg
     6661 atgcgtgact tgcttcccta cggcttgcca aacaatcctt tgagcgcctt ccacagcgtt
     6721 cgagctggct tgggcggtcc ggcgcgggcg acgaggacgg gcatattcga tcggttcaaa
     6781 atgtcacgag ttaaatcgcc catgatgtag tgtcgaaaca ggccacgcgc ctgcgatgtg
     6841 ccggtcacaa tcaaatcgta attgccatcc cgggcttctt cgaaaacctg atcgatcacg
     6901 atgccatgcc tgaggcgcac ttcagcagag acgcccagtc ggtcgagttc tcgtttttgg
     6961 cggcgcaaat tcgttccga
//
LOCUS       DATDAJ010000009         2301 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_42764, whole genome shotgun sequence.
ACCESSION   DATDAJ010000009 DATDAJ010000000
VERSION     DATDAJ010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42764"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VIS53_00195"
     CDS             <1..434
                     /locus_tag="VIS53_00195"
                     /inference="COORDINATES: protein motif:HMM:NF012803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5766230.1"
                     /translation="LQIVRDGKPLTVKTQIREQPVDYESARVLPRGNQPQPQGPQRPN
                     DQETVDSPLASIHVDELTPERARQLDLPPNVRGVLVTDVDPDSGMAELQKGDVIEEIN
                     QQPVTSVSDYNKIAGGLDPGQPQVLSVCRHRSRSFLVLRPR"
     gene            complement(463..1137)
                     /locus_tag="VIS53_00200"
     CDS             complement(463..1137)
                     /locus_tag="VIS53_00200"
                     /inference="COORDINATES: protein motif:HMM:TIGR04305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CADD family putative folate metabolism protein"
                     /protein_id="HEY5766231.1"
                     /translation="MKQNYLDQIDQEIAAKHLLKHPFYLAWTRGELSREALADYARQY
                     YQHVAAFPTYLSAIHANCDDQSTRKELLNNLIDEEAGSPNHPELWLNFAEGLGVSARD
                     ARNVEKWPETNNLIDTFRSVCRDGSTAESLAALYAYESQIPAICESKIDGLKKNYGFA
                     DPKDYEYFSVHIEADREHSAAEQRLLGSYVGNQNFESVRASVNRVLDALWEMLSGVCR
                     RHAIAC"
     gene            1284..1499
                     /locus_tag="VIS53_00205"
     CDS             1284..1499
                     /locus_tag="VIS53_00205"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY5766232.1"
                     /translation="MHSFTSILINCVWSTKKCEPFLSSDVRNRLWPYLGGIARENKMK
                     ALAVGGVADHVHMLISMPGTLTQKTQR"
     gene            complement(1596..>2301)
                     /locus_tag="VIS53_00210"
     CDS             complement(1596..>2301)
                     /locus_tag="VIS53_00210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HEY5766233.1"
                     /translation="ELHRALASRSDDAGFAPEPFSAMAQRSVYQSMRTSLRRAFTSLE
                     KKLSDVPAKFRSEARDVLAAEKEILAREKRLLDRRTNAAKIRIHGDYHLGQLVYTGKD
                     FVILDFEGEPARPLNDRKMKKSALRDVAGMMRSFQYAAYAALWQQAMRKEDVPFLERW
                     ADLWYRQTSSMFLQSYLKTTAGAIFVPKNSDDLQVMLEAYLLDKAVYEIGYELNNRPS
                     WVLIPIRGIKHILKTT"
BASE COUNT          533 a          603 c          607 g          558 t
ORIGIN      
        1 agcttcaaat tgtccgcgac ggaaaaccgt taacagtaaa aacgcagatt agggagcaac
       61 cagttgacta cgaaagcgcg cgcgttctac ctcgcggaaa ccagccacag ccacaaggcc
      121 cgcaacggcc taacgaccag gaaaccgttg atagtccact ggcatcaatt cacgtggatg
      181 aactgactcc ggaaagagcg cgccaacttg atctgcctcc gaatgtgcga ggtgtcttgg
      241 tcaccgacgt cgatcccgac agcggcatgg cagaattgca gaaaggcgac gtgattgaag
      301 aaatcaatca acagcctgtt acgtcagttt ccgattacaa caagatcgca ggagggctgg
      361 acccgggcca accgcaagtt ttatccgtct gccgccatcg gtcgcggtcg ttcctggttt
      421 tgcgaccgcg ataaatgtag ggtggtttgt atcaaagcac cttcagcacg caatcgcgtg
      481 gcgacggcac actccggaaa gcatttccca aagcgcgtcg agaacgcgat tcacggatgc
      541 tctcacggat tcaaaattct gattgccgac gtaactgccc agcaaccgtt gctcggcggc
      601 ggagtgctcg cggtcggctt cgatgtgcac gctgaagtat tcgtaatctt tgggatcagc
      661 gaagccgtag ttttttttga gtccgtcaat tttggattcg cagatcgccg ggatctgact
      721 ttcgtacgcg taaagcgccg ccaggctttc cgcggttgac ccatcgcggc aaactgatcg
      781 gaacgtgtcg atcaagttat ttgtttcagg ccatttctct acgtttcgtg catcccgagc
      841 agagacgcca agaccttcgg caaaattgag ccaaagctcg ggatgattcg gtgagccagc
      901 ctcctcgtcg atcagattgt tgagcaattc cttgcgtgtc gattgatcgt cgcagtttgc
      961 gtgaatcgcc gagagatacg tcggaaacgc tgcaacgtgc tggtaatact gccgcgcata
     1021 atcggcgagg gcctctctgc tcagttcccc gcgcgtccac gcgagataga acggatgttt
     1081 caagagatgt ttcgctgcaa tttcctgatc gatttggtca agatagtttt gcttcataat
     1141 tgcgctccta aatgtgagtc tgcttataac cggagtctca gttgctgcaa gtttgaatcc
     1201 aatcgctcga taatagccca gcgttttaac gctgggtcaa ctgtgatatg aatggatcaa
     1261 gtcccaacag ggacggaaga aacatgcatt catttaccag tatccttatt aattgcgttt
     1321 ggagcacgaa aaagtgcgag ccatttttga gttctgatgt tcgcaaccga ctctggccat
     1381 acctcggtgg tatcgcacga gaaaacaaaa tgaaagcgct ggccgttggc ggagttgccg
     1441 atcacgttca catgctgatt tcgatgccgg gaacactgac ccagaaaacc cagcgctgaa
     1501 gcgctgggct attttcgatc cgccaccgat ttaccccaga cttatgcaat ttgattctat
     1561 aggttgcgat gattcgcgca atctgtggat cattttcatg tcgttttcaa aatgtgtttg
     1621 atcccgcgaa tgggaatgag cacccagctt gggcgattat ttaattcgta gccgatttcg
     1681 taaacggcct tgtcgagcag atacgcttcc agcatgacct ggagatcgtc gctgtttttg
     1741 gggacgaata tcgcgccggc tgtggtcttc agatagcttt gcagaaacat gctgctcgtc
     1801 tggcgatacc agagatcagc ccagcgctca aggaaaggca cgtcttcttt ccgcatcgcc
     1861 tgctgccaga gggcggcgta cgcggcatat tggaaggagc gcatcatgcc ggcgacgtcg
     1921 cggagtgcgg actttttcat tttacggtcg ttcagaggac gcgcaggttc tccttcgaaa
     1981 tcaagaatca cgaaatcttt gccggtataa accagttgcc ctagatgata gtcgccgtga
     2041 atccggattt tcgctgcgtt cgttcgacga tcgagcaatc gtttttcgcg cgccaatatc
     2101 tctttttccg cagcgagcac atctcgggct tcacttcgga atttcgcagg gacatccgac
     2161 aatttcttct ccaaagacgt aaacgcgcgg cgcaacgaag tgcgcatgct ttgataaaca
     2221 gagcgctgtg ccatggcgct gaacggctcc ggcgcgaacc cggcatcgtc actcctcgat
     2281 gccagtgcgc gatgcagctc g
//
LOCUS       DATDAJ010000010         2899 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_52816, whole genome shotgun sequence.
ACCESSION   DATDAJ010000010 DATDAJ010000000
VERSION     DATDAJ010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52816"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..620)
                     /locus_tag="VIS53_00215"
     CDS             complement(<1..620)
                     /locus_tag="VIS53_00215"
                     /inference="COORDINATES: protein motif:HMM:NF015410.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HEY5766234.1"
                     /translation="MPPPLAEAEASPTALNTPRGTRYLTQVLARAEKDLVAKGKNRGA
                     ELLALYKRFLKIEEHRLRLRHYAGGGGREICRLRVDLLDVVIRHIYEYAVDAEKPEVV
                     RMFPLAVVAVGGYGRGELNPFSDVDIMFLRGKGNAPAYINAVIEKVLYLLWDVGFRVG
                     HATRTIAEALTHANSDMISKTSRLEARYVAGDRELAKKFKADFIAE"
     gene            complement(804..2357)
                     /locus_tag="VIS53_00220"
     CDS             complement(804..2357)
                     /locus_tag="VIS53_00220"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEY5766235.1"
                     /translation="MSWERFNRYFLRYEDLGFSIDISRIDFPDNLFESLKPKTDAAFA
                     NMAKLEAGEIVNPDEQRMVGHYWLRDVDTAPDATLRQEILTTLNAIKAFAAEVHAEGK
                     FKNVLVVGIGGSALGPQFVADALGQTNDPMKVWFFDNTDPDGMDRVLAALSDSLESTL
                     VVVISKSGGTKETRNGMLEVEAFFASKNVPFASNAVAVTGVGSELDKYAVKGGWLKRF
                     PMWDWVGGRTSVMSAVGLLPAALQGIDITEFLAGAAAMDRKTRKADVATNASMLLALA
                     WYSTGKGKGAKDMVVLPYKDRLMLFSKYLQQLLMESLGKELDLDGNVVNQGIAVYGNK
                     GSTDQHAYVQQLRDGVNNFFATFVEVRKARSIEGIEVEPGVKTGDYLQGFLRGTRTAL
                     GEKGRETITISIPEVTPLYVGLLIALYERAVGFYASLVNINAYHQPGVEAGKKAAGKV
                     LALQLNAKKALTTAQGVEFTAPALAEKLGADPEDTYYVLVHLAANDPEISFQPGGSPL
                     EDKFSAAAE"
     gene            complement(2580..>2899)
                     /gene="rplQ"
                     /locus_tag="VIS53_00225"
     CDS             complement(2580..>2899)
                     /gene="rplQ"
                     /locus_tag="VIS53_00225"
                     /inference="COORDINATES: protein motif:HMM:NF013369.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY5766236.1"
                     /translation="RPLAEKMVTLGKKATLHARRTAIAVIRQEDAVKKLFEEIAPRAA
                     GRAGGYTRIIKLGERKSDSAPMAFLEWVDAPVVADIAPAVEAKPAKANIVKADEAAVA
                     ATK"
BASE COUNT          619 a          853 c          780 g          647 t
ORIGIN      
        1 cattccgcta tgaaatcggc tttgaatttt ttcgccaact cccgatcacc ggccacatag
       61 cgcgcttcga gcctcgacgt tttggaaatc atatccgagt tcgcgtgggt gagcgcttcc
      121 gcgatagtgc gcgtcgcgtg ccctacgcga aacccgacgt cccagagcaa ataaagaacc
      181 ttctcgatga cggcgttgat gtatgccggc gcattgcctt tgccgcgcag gaacatgatg
      241 tccacgtcgc taaacgggtt caattcgccc cgtccgtatc cacccaccgc aaccaccgcg
      301 agagggaaca tccgcacgac ttccggtttt tcagcatcga cagcatactc atagatgtgg
      361 cgaataacga catcgaggag atcaacccgc aaccggcaaa tttcgcgtcc gcctccgccc
      421 gcgtaatggc gcaaacgcag gcgatgttcc tcgattttta gaaaacgctt gtacagcgcg
      481 agcagctccg cccccctgtt cttgcctttt gcaaccaggt ctttctcagc acgggccaga
      541 acctgcgtga ggtaacgcgt cccgcgcggc gtatttaggg ctgtcggtga cgcttcggct
      601 tctgcaagag gtggtggcat tgaagagaat catacatcgt agcattctca cgccatgcca
      661 gaaagaaaat tggccaccca ttgaagacgc gccctgcata tttcccgaca acgagccttc
      721 ggcacttgtt tcaagcgcag aaggcatcag atgcgcatgc taacccgctc aggcggaacg
      781 ggtgacaagt ggcgtccgcc cccctactcc gccgcagcgg aaaatttgtc ttccagtgga
      841 ctgccgcccg gctggaacga aatttccgga tcgttcgcag cgagatggac gaggacataa
      901 taggtatcct cagggtcggc accgagtttt tcagcgaggg ccggagccgt aaattcgaca
      961 ccctgcgcgg tggttaacgc ctttttcgcg tttaactgaa gagccagcac tttgcccgca
     1021 gcctttttgc cggcttcaac gccgggttga tggtaggcat tgatgttcac caaactcgcg
     1081 tagaatccaa cggctcgttc gtagagtgca atgagcagac ccacataaag cggcgtcact
     1141 tccggaatac tgatggtaat cgtttcgcgg cctttttcgc cgagcgccgt gcgggtgccg
     1201 cgcaggaatc cttgcagata gtcacctgtt ttcacacccg gctcgacttc gatgccttca
     1261 atggagcgcg cctttcgcac ctcgacgaag gtcgcaaaaa agttgttcac gccatcacgc
     1321 agttgctgca catacgcgtg ctggtccgtc gaacccttgt tgccgtaaac cgcgatgcct
     1381 tgattgacga cgttaccgtc cagatcgagt tctttgccca acgattccat cagcagctgc
     1441 tgcagatatt tcgagaaaag catcaaccgg tctttgtacg gaagaacgac catatccttc
     1501 gcgcccttgc ctttgccggt ggaataccag gccagcgcga gtaacatcga tgcgttcgta
     1561 gcgacatccg ctttacgagt cttgcggtcc atcgccgctg cgccggctag gaactccgta
     1621 atgtcgatac cctgcaacgc agcgggaagc aggccgacgg cgctcatgac agaagtccgg
     1681 ccacctaccc agtcccacat cgggaaacgc ttcagccagc cgcctttgac ggcgtacttg
     1741 tcgagctcgc taccaacacc agtcacggca acggcattcg atgcaaacgg aacgtttttc
     1801 gaagcaaaaa aggcctctac ctccaacatg ccattacggg tttccttcgt gccgccggac
     1861 ttggaaatga caactacgag cgtggattcc agcgagtcgc tgagcgcggc caatacacgg
     1921 tccattccgt ccggatcggt gttgtcgaag aaccagacct tcatcgggtc attggtctgg
     1981 ccgagagcgt cggcaacgaa ttgcgggccg agcgcagaac cgccgatgcc aacaacgagg
     2041 acgtttttga actttccttc cgcatgaacc tccgcagcga acgctttgat agcgttgagc
     2101 gtggtcagaa tctcctgccg cagcgtggca tccggcgctg tatcaacgtc acgcagccag
     2161 taatgtccca ccatgcgttg ctcgtcgggg ttgacgattt cgccggcttc aagtttcgcc
     2221 atattggcaa acgcggcgtc tgtctttggt ttcagcgact caaaaagatt gtccggaaaa
     2281 tcaatccggc tgatgtcgat ggagaatccg aggtcttcgt aacggaggaa atagcgattg
     2341 aaacgttccc agctcatagt ttgtagaaga acttgagcat gattgccgcg cggtgggaag
     2401 cgtggaaagc aaaaagcggc tacctggcgc ggttccttgc cggctctcaa aggcttgttg
     2461 agcctgcgtc aaggtcggtg ccatttcagc gagccgatgc agtatcccac cgctctcacg
     2521 aaaaaagcca cgatacttgc gcatcgtggc tttgtcggat tttgattctt ttccgccagt
     2581 tatttggtgg cagcaaccgc tgcttcatcg gccttgacga tgtttgcttt ggcaggtttt
     2641 gcttcaacgg ccggggcgat atcggcaact acaggcgcat ccacccattc caggaatgcc
     2701 atcggcgcgg agtcgctctt gcgttcgccg agcttgatga tgcgggtata accaccagct
     2761 cgtcccgcag cacgtggagc gatttcttcg aacaattttt tcacagcatc ttcctggcga
     2821 atcaccgcga tcgcggtgcg gcgcgcgtgc agagtggctt tcttgccgag cgtcaccatt
     2881 ttctcggcga gcggacgga
//
LOCUS       DATDAJ010000011         6293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_57709, whole genome shotgun sequence.
ACCESSION   DATDAJ010000011 DATDAJ010000000
VERSION     DATDAJ010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6293
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57709"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1825
                     /locus_tag="VIS53_00230"
     CDS             <1..1825
                     /locus_tag="VIS53_00230"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ADOP family duplicated permease"
                     /protein_id="HEY5766237.1"
                     /translation="FQLPGFSYERMMRGTGFLRVIGRIKPGLTVEQVRAALPTLEQDY
                     RANYSTNIDSTAETSVKTLPQDVTKDIRAGFATLFAAVCFVLLIACSNVANLLLVRFS
                     GRRREIALRMAIGASRSSIVRLFVWESLLVSVFAGALGAFVAWRLVPLVPKMASNFLP
                     LEGNTASSLSLEVLAFTIGLSIMTGLLMGIYPALQASRADLVGSLKEGGRGTSGSVRQ
                     QRFRKILIGAQVALSVTLLAGAALLITSFIRLTQQNLGFQPHNLWVGAINLPIAQYPD
                     QVARQRFVERTLAALRDTPGVESATVSSDIPLNGGNRTLYARADREVPPTERRATSPS
                     HDVAPGDLKTWGIPLIAGRDFDEHDVAGGRNVCLISQTGAKKVFPNENPIGKTLLVTS
                     LSTPVEIVGIVGDVRSQRIAELPEMEFYLPWAQENFPFVNIAVRSNLKLDAATKLVQT
                     AVTRVDPGIAIAVPQMMDTVVAQARGQARLMMWLLGIFAGVAILLASIGIYGAVAYSV
                     EQRTGEIGVRMALGAQTRDVLRLIVNQGMRPVVIGLAIGIVSAFAIGRLLTSQLYEVS
                     AHNPALLAASTVLLAAIALIACLVPARRAAHVDPIQALRAE"
     gene            1955..2722
                     /locus_tag="VIS53_00235"
     CDS             1955..2722
                     /locus_tag="VIS53_00235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766238.1"
                     /translation="MHLRLISLIAAALISPAIFAQGTNQPTVDELVAKNIEAKGGATA
                     LNSLKTLRSTGKLLVQQGQIELGHLQTKKRPDQVRTEASLQGMTQIEAYDGKDGWKVS
                     PFFGRKDPERMSADDVKALVEDTEIDGPLVDWKTKGSTIEYLGTEDVDGTPAHKLKVV
                     RKNGDVSFVYLDPDHFLEIRIVTQRVRHGAHEEVETDLGDYEKAGGVFVPTSIEVGRK
                     GSPDKQRVVVDKVEANAPVDDTIFHFPGQISVPQPQR"
     gene            2751..5969
                     /locus_tag="VIS53_00240"
     CDS             2751..5969
                     /locus_tag="VIS53_00240"
                     /inference="COORDINATES: protein motif:HMM:NF027232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766239.1"
                     /translation="MNFARNTFEVRCVLASLFLCSISVYAADAPFNSASISGLGARNI
                     GSAAMSGRISAIAGVREPSGKITLFVGSASGGVWKSDDSGTRYRPIFDEQPVQSIGAI
                     ALDPKNSKNVWVGTGESWTRNTVSIGDGIYKSTDGGETWSRSGLEKSERIGRITVDPR
                     NSDTVFAAVPGALWSDSPDRGLYKTTDGGKTWQQVLKGANLSTGCTDVDIDPNNPDIM
                     FAAMWDFRRKGWEYRSGGAVPTAPSASGLFRSTDGGNTWTEITEQANKGFPKKPYGRL
                     AVAIAPSKSQRIYAFVESPESALFVSDDGGATWEKRDKSQWMVWRPFYFAHLIVDPKN
                     PDRLFKPDGSLIVSEDAGKSFAVVGGFQGAHGDAHDVWIDPTNSQVVFAADDGGMWYS
                     YNGGSKWWKGENLPVSQFYHVSVDEKDPYQVYGGLQDNSSWVGDSQYPGGITNHRWEN
                     MYGGDGFWMFQDPADPDYIYAEYQGGEIGRVNRYTHQARNIKPRPNYNEKLRWNWNTP
                     IALSPNEKGTIYIGAQFLFRSRDHGQTWDRISPDLTTNDPEKQKQEQSGGVTVDNSSA
                     EMHTTIYSISESPKQKGLIWVGTDDGNIQLTRDGGKTWTNVVGNVPGLPKNSWVSWVQ
                     AGNFNPGTAYAAFDRHTFGDMAPYVFKTTDFGKTWTPLITAQDSKSVRGYAHVIKEDL
                     VKPDLLFVGTEFGLWVSIDGGTSWAQFKGNHFPAVAVRDLAIHPRDNDLVLATHGRGI
                     WIVDDITPLRALTPDLLKQDVAFVSARPVQQRIEGQGGWANGDAVFVGENPPDAAVIN
                     YYQRERHLFGKMKLEILDSSGRVVDQLPASKRPGLNRVMWTMRAKPPRVPPAAQIAGA
                     GIRGPRLVPGDYTVRLTKAGKVYDTKLTVGLDRRAKFSAADRKAQFDAAMRVHALFGD
                     ESTLMDRIIALRKALADSGAALPEGDQLRKQISDFDGKVDAVRKKIVATTEGGAITGE
                     ERLREHTDQLYGAILSYEGKPSAYQITYIDTLRRELDEVTKQFDQLLAQDLPALNDSL
                     KSKGQQPLSIPAAKVGTNEATYGSGGVAGASSALPPDFRISY"
     gene            6046..>6293
                     /locus_tag="VIS53_00245"
     CDS             6046..>6293
                     /locus_tag="VIS53_00245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766240.1"
                     /translation="MERKPAVAVVFHHIGPYHHARLNAAADRLSVTGIEWSAKAYDAW
                     GSARTAARYAKVSLFPEATDHSPGNAELRSAFWSALEQS"
BASE COUNT         1388 a         1657 c         1877 g         1371 t
ORIGIN      
        1 ctttcagctt ccgggattct cgtacgaacg catgatgcgt ggaaccgggt ttctgcgcgt
       61 gatcggccgg ataaagcctg gtttgacggt cgaacaggtg cgcgccgcgc tgccaacgct
      121 cgaacaggat taccgtgcca actactcgac gaacattgac agcacagccg agacatcggt
      181 caaaacgctt ccacaggatg tgaccaaaga tattcgcgcc ggtttcgcga cccttttcgc
      241 ggcggtttgt tttgtgttgc tcatcgcgtg cagcaatgtc gcaaatcttt tgctggttcg
      301 tttcagtggg cgccgccggg aaatcgcgct ccgcatggcg atcggtgcat cgcgcagcag
      361 tatcgttagg ctgttcgttt gggaaagttt gctggtcagc gtctttgccg gcgcgctagg
      421 cgccttcgtg gcgtggcggc ttgtgccgct cgttcccaag atggcatcga attttcttcc
      481 gcttgaggga aacacggcca gcagcctttc gcttgaggtg ctcgctttca cgatcggatt
      541 gtcgatcatg acagggctgc tgatgggaat ttatccggcg cttcaggcgt ctcgtgccga
      601 tttggtgggc agtttgaaag aaggcggacg cggaacgagt ggcagcgtac ggcaacagcg
      661 ctttcgcaaa attttaatcg gtgcgcaagt ggcgctttcg gtgacgttgc ttgcgggcgc
      721 ggcgctgctg atcacaagct ttattcgact gacacagcag aatctcggct ttcagcctca
      781 caatctttgg gtcggtgcga tcaatttacc gatcgcgcaa tacccagacc aggtggcgcg
      841 tcagcgtttt gtcgagcgaa ccctcgccgc gttgcgcgac acgccaggcg tcgaaagcgc
      901 taccgttagc agcgatattc cgcttaacgg tgggaatcgc acgctttacg cccgcgcgga
      961 tcgcgaagtg cctccgaccg aacgccgggc cacttcgccg agtcacgatg tcgcgccggg
     1021 agatttgaag acttggggaa ttccactcat tgccgggcgt gactttgacg aacacgatgt
     1081 cgccggaggc cgcaatgttt gtctgatcag ccagaccggg gcaaagaagg ttttcccgaa
     1141 cgaaaatccc atcggcaaga cgctgctcgt aaccagcctc agcactcccg tggaaatcgt
     1201 cggaattgtc ggcgacgtgc gttctcaacg gatcgctgaa ctacccgaaa tggaatttta
     1261 tctgccgtgg gcgcaggaaa actttccatt cgttaacatc gcagttcgca gcaacctcaa
     1321 actcgacgcg gccacaaagc tggtgcagac agccgtgaca agagtagatc cgggcatcgc
     1381 gattgccgtc ccgcagatga tggacaccgt ggtggcgcag gcgcgggggc aagcgcgact
     1441 gatgatgtgg ctcctcggaa tttttgctgg tgttgcgatc ttgcttgcga gcatcggaat
     1501 ttacggggcg gttgcgtaca gcgtggagca acgcactggc gagatcggag tgcgcatggc
     1561 gctcggcgcg caaacccgcg acgtgcttcg cttgattgtg aaccagggga tgagaccagt
     1621 ggttatcggg ttggcgatcg gaattgtgtc agcgttcgcc attggtcgtc tgctgacatc
     1681 gcagctttac gaagtttcag cgcacaatcc cgcgctgctt gccgcttcaa cggttttgct
     1741 cgcggcgatt gcattgattg catgtctggt ccccgcgcgg cgagccgcac acgttgatcc
     1801 gattcaggcg ctgcgcgcgg agtgatatga acgatttgaa gattcaactt cgccggcttg
     1861 ttccacgtac ttttgcttcg cggagcgctt gcgtttcgac ctcgtttgaa tatccgtggc
     1921 acttcgctgt ctcatatcta actccgaacc ttctatgcat ttgcgtttaa tttcccttat
     1981 tgccgccgcg ctcatttctc ccgcaatttt cgcgcaggga acgaatcagc cgaccgtgga
     2041 cgaactcgtt gccaagaata tcgaggccaa gggcggcgcg accgcgctga acagcctcaa
     2101 aacactgcgc tcaaccggta aattgctcgt acaacagggt cagatcgagc ttggtcatct
     2161 ccaaacaaaa aagcgtccgg atcaagtgcg caccgaggct tcgctccagg gcatgacgca
     2221 gatcgaggcg tatgacggaa aggacggctg gaaagtgtca ccctttttcg ggcgtaaaga
     2281 tcctgagcgc atgtcggctg acgacgtgaa agcgctggtg gaagataccg aaatcgatgg
     2341 cccattggtg gattggaaaa caaagggcag cactattgaa tatctcggaa ccgaggatgt
     2401 cgatgggacg cccgcgcaca aactgaaggt cgtgcgaaag aacggcgatg tcagttttgt
     2461 ctatttggat cctgatcact ttcttgagat tcgaatcgtg acgcaacgag tgcgacacgg
     2521 ggcgcacgag gaagtcgaga cggatctcgg ggattacgaa aaagccggcg gcgtatttgt
     2581 tccgacgtca atcgaggtcg gacgcaaggg ctcaccggac aaacaaaggg tcgtagtcga
     2641 taaagtcgaa gccaacgcgc cggtggatga cacgatattt cattttcccg gccaaataag
     2701 tgtaccccaa ccacagcgct gagcttccgc aacgccgaat tagcacttct atgaatttcg
     2761 cacgtaatac ttttgaagtg cgatgcgttc tcgcatcgct ttttctttgc tccatttctg
     2821 tttatgcagc tgacgctcca tttaattcag cgagcatttc cgggctcgga gcgcgcaaca
     2881 tcggctcagc ggcaatgagc ggccgcattt cggcgatcgc cggtgtgcgc gagccctctg
     2941 gcaagatcac attatttgtc ggctcggcga gcggcggcgt ttggaaatct gacgacagcg
     3001 gaacgcgata tcgcccgata tttgacgaac aacctgtgca atcgatcggc gccatcgcgc
     3061 tcgatccgaa gaattcgaaa aacgtttggg tcggcactgg tgaatcgtgg acgcgcaaca
     3121 ccgtttccat tggcgacgga atctacaagt ccaccgacgg cggcgaaaca tggtcgcgct
     3181 ctggcctgga gaaatcggaa cgcatcggaa ggattacggt tgatccaaga aacagcgaca
     3241 cagtatttgc cgcggttcct ggcgcgttat ggagcgattc gccagatcgt ggtttgtaca
     3301 aaacgactga cggcggcaag acgtggcagc aagttctcaa gggcgcgaat ctttcgaccg
     3361 gctgcaccga cgtcgacatc gatccgaaca atcccgatat catgtttgcc gcgatgtggg
     3421 atttccggcg caaaggttgg gaataccgct cgggcggcgc agttccgacg gcgccttcag
     3481 ccagtggatt gtttcgttcg accgatggtg gcaacacctg gacggagatt actgagcagg
     3541 ctaacaaagg tttccccaag aaaccgtatg gacgtttggc ggtggcgatt gcgccatcga
     3601 aatcgcaacg catttacgcg tttgtcgaat caccggagag cgcattgttc gtgtcggatg
     3661 acggcggtgc gacatgggag aaacgcgaca aaagtcagtg gatggtctgg cgtccgttct
     3721 actttgcgca tctgattgtt gatcccaaga acccagaccg cctgtttaaa cccgatggtt
     3781 cgctgattgt tagcgaggac gcgggaaaga gctttgcggt agtgggtggc tttcaaggcg
     3841 cgcacggcga cgcgcacgat gtgtggatcg atccgacgaa ctcacaagtc gtattcgcgg
     3901 cagacgatgg cgggatgtgg tactcgtaca acggcggcag caaatggtgg aaaggagaaa
     3961 acctgcctgt gtcgcagttc tatcatgtga gcgtggacga gaaggatccg taccaggtgt
     4021 atggcggatt gcaggacaac agctcgtggg taggtgattc gcagtatccg ggtggtatca
     4081 ccaatcatcg ttgggaaaat atgtatggcg gcgatggatt ctggatgttc caggacccgg
     4141 ctgatcctga ttacatttat gccgaatacc agggcggcga gattggccgt gtcaatcgct
     4201 acacacatca agcccgtaac atcaagccgc gacccaatta caacgagaaa ttgcggtgga
     4261 actggaatac gccgatcgcg ctttcgccta acgagaaggg aacaatctat atcggcgcgc
     4321 aatttttatt ccgttcacgc gatcacgggc agacgtggga ccgcatttca ccggacctga
     4381 ctaccaacga tccggaaaag caaaagcaag agcaatcggg tggtgtgacg gtggataatt
     4441 cgtcggcgga aatgcacacg acaatttatt ccattagcga atcgcccaag cagaagggac
     4501 tgatctgggt cggcactgat gatggcaaca ttcagctcac gcgcgacggc ggtaagacgt
     4561 ggactaacgt cgtcggcaac gttcccgggt tgccgaagaa ctcatgggtg agctgggtgc
     4621 aggcgggcaa cttcaatccc ggcacggctt acgccgcttt tgatcggcat acttttggcg
     4681 acatggcgcc gtacgttttc aagactaccg atttcggtaa gacctggaca ccgctcatca
     4741 ctgctcagga ctcgaagagt gttcgcgggt acgcgcacgt gatcaaagaa gatttggtca
     4801 agcccgatct tcttttcgtc ggcacggagt ttgggctctg ggtttcgatt gatggcggaa
     4861 caagctgggc gcaatttaag ggcaaccatt ttcctgccgt tgcggttcgc gacctggcga
     4921 ttcacccgcg ggacaacgat ttggttctcg ccacgcacgg ccgcgggatc tggatagtag
     4981 acgacatcac gccgctgcgc gcattaacgc cggatttgtt gaagcaggat gtcgccttcg
     5041 tttcggcgcg gccggtccaa cagcgcatcg agggccaggg tggatgggcc aatggggacg
     5101 cagttttcgt tggcgagaat ccgcctgatg ccgcggtgat taactattat cagcgtgagc
     5161 gacatttgtt tggaaaaatg aaactcgaaa ttttggattc atccggacgt gttgttgacc
     5221 aattgccggc gagcaaacgg ccgggattga atcgggtgat gtggacgatg cgggcgaaac
     5281 cgccgcgtgt gccgcctgct gcacaaattg ccggtgcggg aatacgcggc ccacggctcg
     5341 tgccaggtga ttatacggtg cgcctaacga aggccggcaa ggtttacgac acgaaactga
     5401 cggtcgggct tgatcgccgg gcgaaattca gcgcagcaga tcgcaaagcg cagttcgatg
     5461 cggcgatgcg agttcacgct ttgtttgggg atgaaagcac gctcatggat cgcatcatcg
     5521 ctttgcgaaa agcgctcgcc gacagtggag cagcgctgcc cgagggagat cagcttcgca
     5581 agcagatctc agatttcgac gggaaagtgg acgcagtgcg aaagaagatc gtcgccacga
     5641 ccgaaggcgg cgcaatcacg ggcgaggaac gtttgcgtga gcacaccgac cagctttacg
     5701 gagcaattct cagttacgaa ggcaaaccgt ccgcctatca gatcacttac atcgacacgc
     5761 ttcgacgcga actcgatgag gtgacaaaac aattcgatca actcctcgcg caggacctgc
     5821 ccgcattaaa cgactcactc aaatccaaag gccaacagcc actgtcaatt ccggcagcta
     5881 aagtcggaac gaacgaagcg acatatggat cgggcggcgt tgcaggtgca agctcggctc
     5941 ttccaccgga ctttcgcatt tcgtactagc ccgggcggga agtccacatt cggaaatatt
     6001 cgagtggttc tgcggaagat tggaagttag tctctcgtgc gccacatgga gcgcaagcct
     6061 gctgtcgcgg ttgtttttca tcacatcggc ccttatcacc acgcgcggct gaatgctgcg
     6121 gctgatagat tatcagtgac gggcattgaa tggtcagcga aagcttatga cgcatgggga
     6181 tcagcgagaa cggctgcgcg gtatgccaaa gtttcgctct tcccggaagc aacagatcac
     6241 tccccgggca atgccgagct tcggtctgcg ttctggtcgg ctttagagca gtc
//
LOCUS       DATDAJ010000012         2496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_59304, whole genome shotgun sequence.
ACCESSION   DATDAJ010000012 DATDAJ010000000
VERSION     DATDAJ010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59304"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1122)
                     /locus_tag="VIS53_00250"
     CDS             complement(<1..1122)
                     /locus_tag="VIS53_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY5766241.1"
                     /translation="MARFNYVALDARGQEASGLLEAASSSAAISQLRQAGYFPTSVIE
                     EAIISSDGKQARGRALTAARVTKPAAKKGIVLFQRRKVKSKILMIFTRQLATLIDSGL
                     PLLRSLNVLAKQERDKVMKNTTDKLADSVQSGSTFSDALALHPKIFNDLYVNMVKAGE
                     VGGVLELVLTRLSEFQEKAAKIRNKILSAMVYPIIVMTMAIGILCFLLVFIVPRFEEI
                     FHDLLGDKPLPPVTRFVLAVSGFMQHQGLVLLGAVVAIVVIYNFVGRTRRGRLAIDNF
                     KLRMPLFGNLNRKTAISRFARTLGTLVTSGVPILQALNITRETAGNAAIARAIARVQD
                     SVKEGESIVQPLEASKQFPPMVVSMVDVGEETGKLPEMLL"
     gene            complement(1181..>2496)
                     /locus_tag="VIS53_00255"
     CDS             complement(1181..>2496)
                     /locus_tag="VIS53_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY5766242.1"
                     /translation="VVSPPEQIEELIKQHYGTDTTSMQEVLKQLGEAGEALQLRETDG
                     EAAVEAEANATPIIRFVDLILYQAIQDRASDIHFEPFENEFKIRYRVDGALYEMSPPP
                     RHLALPVISRVKVMANMNIAERRLPQDGRIQKQIAGRSVDLRVSTLPTQFGESLVLRV
                     LDRSIVNLDLEALGIPDYIYNFLLEMIERPNGIFIATGPTGSGKTTTLYSCLRKINTI
                     DSKLITAEEPVEYDLEGIVQVPVNEAIGLTFARVLRSFLRQDPDRIMVGETRDLETAQ
                     IAIQASLTGHLVFTTLHTNDAPGAITRLIDMGVEPFLISSTLEAVLGQRLLRSICGQC
                     RAPYRPNDSLLDELGISHRDLGEKQFFYGKGCDACNSTGYKGRKGIYELLRITDPIRE
                     LINERAPTVTIKQKAIELGMITLRQDGLRSIFAGDTTIEEVLKYT"
BASE COUNT          523 a          691 c          693 g          589 t
ORIGIN      
        1 tagaagcatt tcgggaagtt tgccggtctc ttcgcccaca tcgaccatgc tgacgaccat
       61 tggcggaaac tgtttgctgg cttcgagcgg ttgcacgatc gattcgcctt ctttcacgct
      121 gtcttgcacc cgcgcgatcg cgcgagcgat ggcggcattg cccgcagtct cacgcgtgat
      181 atttaaggcc tgcaaaatcg gcacaccgct ggtgaccagt gttcccagtg tgcgcgcgaa
      241 acgggagatc gccgttttgc gattcaagtt accgaagagc ggcatgcgca gtttgaaatt
      301 atcaatcgcg agtcgacctc tacgcgtgcg gccgacaaag ttgtaaatga ccacaatcgc
      361 cacaacggct ccgagcaaaa ccaggccctg gtgctgcatg aagccgctaa cggcgagaac
      421 gaagcgcgtc acaggcggca gcggtttgtc gccgagcaag tcgtgaaaaa tttcctcgaa
      481 ccgcgggaca atgaacacga gcaagaaaca caggattccg atcgccattg tcatcacgat
      541 gatcggatac accatcgccg agaggatctt gtttctaatc ttggcggctt tctcctgaaa
      601 ttcggaaagc cgcgtaagca ccaattcgag cacgccgccg acctcgcccg ctttgaccat
      661 gttgacgtac agatcgttaa agatcttcgg gtgcagcgcc aacgcgtcgg aaaacgtgct
      721 gccgctctgc acagagtcag cgagcttgtc ggttgtattt ttcattactt tgtcgcgttc
      781 ctgctttgcc agaacgttta agcttctcag cagcggcaag ccggaatcga tcagcgtcgc
      841 cagttggcga gtaaagatca tcaggatttt tgacttaact tttctgcgct ggaaaagaac
      901 gatgcctttt ttcgcggccg gtttcgtcac gcgcgccgcc gttagtgccc gtccacgagc
      961 ttgcttgccg tcggaactga ttatggcttc ctcgatgacg ctggtcggga aataaccggc
     1021 ctgacgcagt tgactgattg ccgcgctgct tgaagcggct tcgagtaatc cggatgcctc
     1081 ttgtccccgg gcgtcgagag ctacgtagtt aaagcgtgcc atgaggggct attctaatta
     1141 gatcgagagt taatgtcgag catcactacc tcatcgtgat ttacgtgtat ttcagcactt
     1201 cttcgatggt cgtgtcgcct gcgaagatgc tgcgcaaacc gtcctggcgc agcgtaatca
     1261 ttccaagctc gatcgccttt tgtttgatcg ttacagtcgg ggcgcgctcg ttgatcagtt
     1321 cacgaattgg atctgtgatt ctcagaagct cgtaaattcc tttccgtcct ttgtagccgg
     1381 tgctattaca cgcatcgcaa cctttgccgt agaagaattg tttctcgcca aggtcgcgat
     1441 gcgagatacc gagctcgtcc agcaaagagt catttggccg atatggcgcg cggcattgac
     1501 cacagatgct gcgcaagagc cgctgaccca ggacggcttc caacgttgac gaaataagga
     1561 agggctccac ccccatatcg attaagcgcg tgatcgcacc cggcgcatcg ttcgtgtgca
     1621 gcgtggtgaa aacgagatgt ccggtaagcg atgcttggat ggcaatttgc gccgtctcga
     1681 gatcgcgcgt ctcgccaacc ataatgcggt ccggatcctg gcgtaggaag gaccgcaaca
     1741 cgcgcgcaaa ggttaagccg atcgcttcgt tcaccggcac ctgaacaatg ccttccaagt
     1801 cgtattcgac tggctcctcc gcggtgatca gcttcgaatc gattgtgttg atcttgcgca
     1861 aacaggagta aagcgtggtg gtttttcctg agccggtcgg cccggtggcg atgaaaatgc
     1921 cgttcgggcg ctcgatcatt tcgagcagaa agttgtagat gtaatccgga atgccgagcg
     1981 cttcgagatc cagattgacg atgctgcgat ccagcacgcg cagcacgagg ctttcgccga
     2041 attgggtcgg taaggttgaa actcgcagat caacgctgcg ccccgcgatc tgcttttgaa
     2101 tccgaccgtc ttgcggcagc cgtctttcgg caatattcat gttcgccatg actttcacgc
     2161 gcgaaatcac cggcaacgcg aggtggcgcg gcggtggcga catttcgtaa agcgcgccat
     2221 cgacgcgata gcggattttg aactcgtttt cgaacggctc gaagtgaatg tcgctcgccc
     2281 ggtcctggat ggcctggtaa agaatcaaat ccacaaaacg gatgattggc gtggcgttcg
     2341 cctctgcttc aaccgctgcc tcgccatcag tctcgcgtaa ttgcagcgct tcgccggctt
     2401 cgccgagctg cttgagcact tcctgcatgc tcgtggtgtc ggtgccgtaa tgctgcttga
     2461 tcagctcctc gatttgctca ggcggcgaca cgacta
//
LOCUS       DATDAJ010000013         4159 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_63531, whole genome shotgun sequence.
ACCESSION   DATDAJ010000013 DATDAJ010000000
VERSION     DATDAJ010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4159
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63531"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..1252
                     /gene="selD"
                     /locus_tag="VIS53_00260"
     CDS             257..1252
                     /gene="selD"
                     /locus_tag="VIS53_00260"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:NF002098.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HEY5766243.1"
                     /translation="MSQQALRQVLPQLPISLSRNVLVSSKTFDDAGVYRLDRDRALVQ
                     TVDFFTPIVDDPFSYGQIAAANSLSDIYAMGGRPLTALNIIGFPEDLVSPRVVSSILR
                     GGLAKAAEVGCVIIGGHSIRNPEPIYGLAVTGLVDVRRVTTNANARPGDTLVLTKPLG
                     TGIATTAIKRGMASRALQKNVIALMSQINTVGADLAELGLVRAATDITGYGLIGHLIS
                     LCRASDVSADIDPAAVPIISYEIHELVNLGCVPQGTRDNLNGATVLVDWARTDETCQI
                     LLTDAQTSGGLLLCVAETNLGEVLKVLRKAGTHSAALIGRIVPRRRRRPLICMTE"
     gene            1249..2628
                     /gene="selA"
                     /locus_tag="VIS53_00265"
     CDS             1249..2628
                     /gene="selA"
                     /locus_tag="VIS53_00265"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HEY5766244.1"
                     /translation="MRCDKRRQIPAVSKILDALGQSDLPRPFVVELVRRKLSEIRANS
                     VAPEFELIVADLRRSLDEFRASRIQSVINGTGIVIHTNFGRAPLPREAVDAVNEIGAA
                     YSNLEYDLAKGERGRRGAYVETALALLCEAEAATVVNNCAAALLLIVQHFARKAGKAR
                     PPDAPEVVISRGELVQIGGGFRISEIVEASGVKLREVGATNKTTLEDYEHAVGPETAM
                     ILKVHRSNFFMRGFVESPSSDEISAVAKKKRIPFVEDLGSGAMVATESLGIAEHEPTP
                     GDALKAGADLVCFSGDKLLGGPQAGIVAGKKRFITALKREPLFRALRCDKLCLVALQT
                     TVDLHLNHKIGEIPALALLQTSEDALRARAAAIASNLADLPMKIAIRCGKAKTGGGTL
                     PTSNVPSVTIDFIPGDRSVAEFAASLRASNPPVIGYIADNRLKLDLRTIFPRQDESVI
                     NAARAACTK"
     gene            2616..>4159
                     /gene="selB"
                     /locus_tag="VIS53_00270"
     CDS             2616..>4159
                     /gene="selB"
                     /locus_tag="VIS53_00270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HEY5766245.1"
                     /translation="MHEVTTRHFIIATAGHVDHGKSALVKALTGTDPDRLPEEKKRQI
                     TIDLGFAALNVTAPNGDKIHAGIVDVPGHEDFVRNMIAGIGSIDLALFVVAADDGWMP
                     QSEEHLQILNYLGVQRAVIALTKSDLGRIDVVANQIRGQLTDTPFADSPIVPTSVRTG
                     TGIEKLVNTLTVQLARTESQRDISKPRLFIDRVFTLRGIGTVVTGTLTGGSLRRRQQI
                     VVYPTNLETRIRSIQSHGHELEVAQPGMRTAINLPDLRVDQIKRGDVVTLPDHGTPTS
                     TLIVRVQKPSRLNGGKIVAHPLKNGSSIYVHHGASRVVGRIRFRENGSLEAGKEKIAR
                     LTLASPIFAFIGDRFVVRDSSERHTIAGGIVLDPDGDKESLAASVALDNVDSLVRATL
                     ARQGFARRENLLSKSRFSADEISEALINLEKNGEIVVCQNIAADREFWRKIRAQAIGL
                     IEAAHNESPDRAGIDLGELRSALRIPEPEMLESLVADLCEGDFVRKGSIIARTSHRPT
                     LPVHIQP"
BASE COUNT          931 a         1152 c         1179 g          897 t
ORIGIN      
        1 ggagagtgaa gggtgcctgg tggccctcgc ggtcttcaaa accgtcgtcg ccacgcaagt
       61 ggcgaggtag gttcgattcc tatcctctcc gcgtatttga atcagtccct gtagccgttt
      121 cgctgtgcga aacgcgcgcg tcgcccgcag ggcgacggct acagcagctg caacgggaaa
      181 ggaggtgaat gatatgtcgc gtgagcaaat ccgaaagcta acatcgcttt catcctgcgc
      241 cgggtgagcg tcaaaattga gccaacaggc cctgcgacaa gttttgccgc agcttcccat
      301 ttcgttaagc cggaacgtgc tcgttagttc gaagacgttc gacgacgcgg gtgtgtaccg
      361 gttggaccgc gatcgcgcac tcgtgcagac ggttgatttc ttcacaccga ttgtggacga
      421 cccgttttcg tacggccaga tcgcagccgc caactcgctc tccgacattt acgccatggg
      481 tggacgtccg ctgaccgcac taaacatcat cggttttcct gaggatctcg ttagtccaag
      541 agtggtttcg tcaattttgc gtggtggcct tgccaaggca gccgaggtcg gatgcgtaat
      601 cattgggggc cattccatcc ggaatccaga accgatctac ggacttgcgg ttacagggct
      661 tgttgacgtc cgacgcgtca ctacaaatgc aaatgcgcgt cccggcgaca cgctcgttct
      721 gaccaagcca ttgggcaccg gtatcgccac gaccgcgatc aaacgcggaa tggcttcgcg
      781 cgcgctgcaa aaaaacgtga ttgcccttat gtcccagata aacacggtcg gcgccgattt
      841 ggcagagttg gggctcgtgc gcgccgccac cgatatcact ggctatgggc tgatagggca
      901 tctgatctcg ttgtgccggg cgagtgacgt ctccgcggat atcgatccgg ctgctgtgcc
      961 gatcatcagc tacgaaattc acgagctcgt gaatctgggc tgcgttccac aaggaacccg
     1021 cgataatctt aatggagcca cggttctcgt cgattgggcg cgaacggatg agacgtgcca
     1081 aattctgtta accgacgcac agaccagtgg cggattactg ctgtgcgtcg ccgaaaccaa
     1141 tctgggagag gtgctcaaag tcctccgaaa agccggcaca cattccgccg cgctgattgg
     1201 ccgaatcgta ccgcgacgac gtcgccgccc attgatatgc atgaccgaat gaggtgcgac
     1261 aagcgacgcc aaattccagc ggtatcgaag atcctggatg ctcttggcca gtctgatttg
     1321 ccgcggcctt tcgttgtcga gcttgtccgc cgcaaactgt cagagattcg tgcgaacagt
     1381 gtggccccag aattcgagtt aattgtcgct gaccttcgtc gctcgctcga tgaatttcga
     1441 gccagcagaa ttcaatcggt catcaacgga acggggattg tcattcacac aaatttcggg
     1501 cgcgccccgc ttccgcgcga agccgtagac gcagtgaatg aaatcggggc agcgtattcg
     1561 aatctcgaat acgatcttgc gaaaggcgaa cgcggaaggc gcggcgctta tgtcgagact
     1621 gcgctcgcct tgctttgtga agccgaggcg gcgacggtag tgaacaattg cgcagcggca
     1681 ttgcttctca tcgttcagca cttcgcacga aaggctggta aggcgcgacc gccagacgcg
     1741 ccggaggttg tcatttcacg gggcgaactg gtgcaaatcg gcggcggatt tcgcatcagc
     1801 gaaattgtcg aagcgagcgg cgtgaaattg cgcgaggtcg gcgcgaccaa taagaccaca
     1861 ctcgaagatt atgagcacgc cgttggaccg gagaccgcga tgattctgaa agtgcaccgc
     1921 agcaattttt tcatgcgcgg ttttgtagaa tcgccttcct cggatgagat cagcgcggta
     1981 gcgaagaaga agcggattcc gtttgtcgaa gatctcggca gcggcgcgat ggtcgcgact
     2041 gaatcattgg gcatagcgga gcatgagccc actcctggcg acgcgctaaa agccggcgct
     2101 gatcttgttt gcttcagcgg cgataaactc ttgggcggtc cgcaggcggg aatcgtcgct
     2161 ggaaaaaaac gattcattac cgcactgaaa cgcgaaccgc tctttcgggc tttgcgctgc
     2221 gacaaactct gtcttgtcgc gttgcaaacg actgtggatc ttcacctgaa tcataaaatc
     2281 ggcgaaattc cggcgctggc gcttttacaa acttcagagg acgcattgcg cgcccgtgcc
     2341 gcagcaatcg cttcgaattt ggcggatttg ccaatgaaga tcgcaatccg ttgcggcaaa
     2401 gcgaaaacag gcggcggtac attgccaacg tctaatgtgc catcagtgac gatcgacttc
     2461 attcccggag atcgctcagt agcggagttc gcagcgagtc ttcgtgcgtc gaatccccct
     2521 gtaattggct atatcgcaga caaccgactt aaactcgatc tgcgcacgat ttttcccagg
     2581 caggacgaaa gcgtgatcaa tgcggctcgc gcggcgtgca cgaagtgaca acgcgtcatt
     2641 tcatcatcgc tacagcaggc cacgttgatc atggcaagag cgcgctggtc aaagcgttaa
     2701 ccggcaccga tcccgatcgc ctgcccgagg aaaagaaaag gcagatcaca atcgatctgg
     2761 gtttcgctgc attgaatgta accgcgccaa acggcgacaa aattcacgca ggcatcgttg
     2821 atgtccccgg ccatgaggat ttcgtgcgca acatgatcgc cggaattggc tcaatcgatc
     2881 tggcactgtt tgtcgttgcc gcagatgacg gctggatgcc gcaaagcgaa gagcatttac
     2941 aaatcttaaa ttacctcggt gtgcaacgcg ccgtgattgc gctcaccaag agtgacctgg
     3001 gtcgaatcga cgtcgtcgct aatcaaattc gtggccaact cactgacaca ccttttgcag
     3061 attcgccgat tgttcccact tccgttcgca ccggaacggg cattgagaag ttggtaaaca
     3121 cgctgactgt tcaactcgca agaacagagt cccaacgcga catcagcaag ccacgcttgt
     3181 ttatcgatcg agtgttcacg ctccgcggga tcggcacagt tgtgacggga acgctaaccg
     3241 gcgggtcgtt gcgtcgccgc cagcaaatcg ttgtttaccc gacgaatctc gaaacgcgta
     3301 ttcgttcaat tcagagccac ggccatgaac tggaagtcgc gcaaccggga atgcgcacgg
     3361 ccataaatct acccgatctc cgcgtcgatc agatcaagcg cggtgacgtg gtgacgcttc
     3421 cggatcacgg cacgccaact tcgactctga ttgttcgtgt gcaaaagccg tcgcgcctca
     3481 acggcggcaa gatcgttgcc catcctctga aaaacggatc ctctatatat gtgcaccacg
     3541 gtgcgtcgcg cgttgtcggc cggattaggt tccgtgaaaa cggatctctc gaggcaggca
     3601 aagaaaaaat tgctcgatta acgcttgcct cacctatctt tgcgttcatc ggcgatcgtt
     3661 ttgtcgttcg cgattcctcg gagcgacaca ctatcgccgg cggaatagta ctcgatccag
     3721 acggcgacaa agaatcattg gcggccagtg tcgcactaga caacgtcgat tctttggtac
     3781 gcgcgaccct cgcgcggcag ggatttgcgc gtcgagaaaa tcttttgagc aagtcacgat
     3841 ttagtgccga tgaaatttct gaagccctga taaatttgga gaaaaacggc gagattgtcg
     3901 tgtgccagaa cattgcggct gatcgtgaat tctggcggaa aatccgcgcg caggcgattg
     3961 ggttaatcga agcggcgcac aacgagtccc ccgatcgcgc cggcatcgat ctgggtgagc
     4021 tacgctcagc gttgcgcatt ccagaaccgg agatgcttga atcgctagtg gcggatctgt
     4081 gcgagggcga tttcgtccgc aaaggatcca ttatcgcacg gacttcccat cgtccaacgc
     4141 tgccggtcca cattcaacc
//
LOCUS       DATDAJ010000014         7194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_64454, whole genome shotgun sequence.
ACCESSION   DATDAJ010000014 DATDAJ010000000
VERSION     DATDAJ010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7194
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64454"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VIS53_00275"
     CDS             <1..860
                     /locus_tag="VIS53_00275"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nickel-binding protein"
                     /protein_id="HEY5766246.1"
                     /translation="IKSAPMPLYMDIHNLPEGTTPEDVAKAHAKDMEIQRKYGVEYHK
                     YWVNETGNKVFCLAHAPNAEAAECVHREAHGMMAEKIIEVEPDVAEVFLGGTETNPAG
                     AVLLPGGGPNERDPGIRTVLFTDVVNSTTLTQSLGDKAALAIVGVHDTIVRNALSALG
                     GREVKHTGDGIMASFVSAASAVRCAIQIQRELDKHAQVNSEHPLKVRVGAAAGEPVEK
                     NNDLFGSTVQLAARLCAHAQPEQILVSTAIAELCIGKDLSFEDIGEVTLKGFGSPVRA
                     HAAAWRQAN"
     gene            1113..1490
                     /locus_tag="VIS53_00280"
     CDS             1113..1490
                     /locus_tag="VIS53_00280"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5766247.1"
                     /translation="MELQGIDHIAMGVHDIERSAKWYIDVLGFERLHEGMWNGVPTFI
                     GKGNTGIALFPANQEPKTSTHREIRMLHLAFRADRQNFRSAQRELKKRGIKFEFQDHE
                     IAHSIYFRDPDGHQLEITTYQVT"
     gene            1745..2812
                     /locus_tag="VIS53_00285"
     CDS             1745..2812
                     /locus_tag="VIS53_00285"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEY5766248.1"
                     /translation="MKTITLKPLVLCLAVVGLGPIASAQDINLPDVSQAAEVKQRIGL
                     TDITVKYHRPLVNGRKIWGGLVPYGQVWRAGANENTTIEFSDPVSVEGKPLDKGTYGL
                     HMIPNQDSWTVIFSKTNTAWGSYGYDQKEDALRVDVKPRPLAENEEALEFEFENLKPD
                     STAVTLKWEKLGVPFNISIKDSEQTLADIRAQLKGRAQFTWDAMDAAAQFCLSKKINL
                     EEALRWADGSIQNEERFDNLSTKADILKALNRPDEAKTVWSQALAKADAPQLYSYGRR
                     SQNQKHGAEAMEIFKEVAKRFPNGVFGYLAQARLKSASGDFAGALSDAKQAQAAAPSD
                     AQKQSIQDLIDRLEAKQDINK"
     gene            2849..5434
                     /locus_tag="VIS53_00290"
     CDS             2849..5434
                     /locus_tag="VIS53_00290"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HEY5766249.1"
                     /translation="MGRSPESAPLHLTHHRIARSEVRDHRYKKRCWRAAFIVAIVAVA
                     STANSADAPPLLSSDQMNGSEIQLALQKLKMLGRVLYIAAHPDDENTNLMAFWANGSL
                     YDAAYLSVTRGDGGQNLIGPELGERLGVIRTEELLDARRIDHARQFFTRAIDFGFSKT
                     ADETMRIWDHNKILADVVWIIRNFRPDVIVTRFSPADEKTHGHHTASAILAQEAFSAA
                     ADPNRFPEQLVFVKPWQATRLVWNTSPFFFTNRNLPFDPTGLMVLEAGGYNPLLGKAY
                     TEIAAASISMHKSQGVGGLPRRGARKEYFKPLEGSPMTSSLFEGVDTTWSRVANSESV
                     AAQISQIISKFNPADPAASVAELLKLRQTMSGLQDESWIAEKKAQLDKIIAACLGLHV
                     EASTTTETFTPGQTATIKLDAINRSNVPVTLQEARFPETGDSNKIDAALPSNELVTKD
                     LSYKIPNDAPYSQPYWLRKPGALGTFAVDDQKLIGLPENPPALPVEVVLQVSGQELRY
                     TVDTKYRTADTLPTEVPRPLVIAPPVFANVANYVVVFPTNESKTVSIHVTAATSPVKG
                     ELKLAAPQGWEISPASIPVDLKAAGAEMMATFSVKPPNQNGEGMLRAIVSIEGRDYSL
                     ERVRISYPHIGVETLMPPAQAKLVRADIRKKGDRIGYIPGAGDDIPESLRQIGYSVNI
                     LSEPDITAKNLAQFSAVVLGIRAYNTQDRISNWLPEVFAYVKEGGVAIAQYNTTADLK
                     TNQLGPYPLEISRDRVTDENAQVRVLAPDNPLMNIPNKITAKDFDGWVQERGLYFPNK
                     WDPAWTPILSCNDPKEKPLDGGLLVAKSGKGFFIYTSYSWFRQLPAGVPGAYRLFANM
                     LSLGK"
     gene            5547..>7194
                     /locus_tag="VIS53_00295"
     CDS             5547..>7194
                     /locus_tag="VIS53_00295"
                     /inference="COORDINATES: protein motif:HMM:NF012686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HEY5766250.1"
                     /translation="MNRLDYLVLIATILAIPLYGVWRTRGSASLGQYLKGDASIRWAT
                     IGLSVLATQAGPITFLSMPGLAYEGGIGFIQNYFGQPLALIVVCAVFLPIFQRLKVYT
                     AYQYLGERFDRKTQLLGAFLFLIQRGIAAGITVYAPAIILSALLGWRLNLTIWLAGGL
                     VIVYTVIGGTKIVSITQRYQMIVILVGMAIAFAVAVYRLSPDLSFENTLSIAGGMGKL
                     EAVNFSVDPHKRYTFWSGLIGGFFLALSYFGADQSQVQRYLAGGSLKESRLGLLFNAV
                     VKVPMQFFILLLGAIVFMFYQFEKPPVYFNQPAYERAMENGYAPQLTQLQTQFDDVFA
                     QKRAAIRALPTTSSSERDAAMNKVRKLDAEAHALRDQTKAVLVQAGVDPKSKESDYVF
                     ITFILQQMPHGVVGLLIAVILCATMSAMAATLNALGSTTAIDFYRPLIRPNASDHHYV
                     VAAQALTAAWGLIAIGVASFASLVENLIEAGNILGSVFYGSILGLFLTAFFIRRVTGS
                     AVFFAALIAQTLVFVLFATTNIGYLWYNFIGCAAVLILASI"
BASE COUNT         1690 a         1956 c         1976 g         1572 t
ORIGIN      
        1 cgataaaatc agcgcctatg ccgttataca tggacattca caatcttccg gagggaacaa
       61 ctccggaaga cgtcgcgaaa gctcacgcca aggatatgga aatccagcgg aaatacggcg
      121 tcgaatatca caagtactgg gtcaatgaga ctggcaacaa agttttttgc ctcgcacatg
      181 cgccaaacgc agaggcggca gagtgtgttc atcgcgaagc tcacgggatg atggccgaga
      241 aaattatcga ggtggaaccc gacgtcgcag aagtgttcct cggcggtaca gaaacaaatc
      301 cggctggagc agtccttctc cctggtggtg gacccaatga acgagatccg ggaatccgca
      361 ccgtgctgtt caccgacgtt gtgaattcaa caacattgac gcaatcgctg ggtgacaaag
      421 ccgcacttgc aatcgttggc gtgcacgaca cgatcgtgcg aaatgccttg tccgcgctag
      481 ggggacgcga ggtaaagcat accggggacg gaatcatggc atcgttcgtt tccgcagcga
      541 gtgcggtgcg atgcgcgatc cagattcagc gggaattgga caagcacgcg caagtaaatt
      601 ctgaacaccc actcaaggtg cgagtcggcg cggcagcagg cgaaccggtc gaaaaaaata
      661 acgatctctt tggatcgaca gtgcaacttg cggcgcggct atgcgctcac gcgcagccgg
      721 aacagatcct ggtttcgacc gcgatcgcgg agctgtgcat cggcaaagac ctttcgttcg
      781 aagacatcgg cgaagtgacc ctcaaaggct tcggttcacc agtccgtgcc catgccgccg
      841 cttggagaca ggcaaattag acagatttat ctgcaattaa ttgcagattt ctcaagactg
      901 aattctcgtt agatgcttgt gcgcgtcgtc atcacgggtg gatcgacttc tccgaaggcg
      961 atgcgaaaaa tcgccgaagg cgcagttctc gtcttgggca gcggccatcg ctattaacaa
     1021 cggaactcca cccccggcgc ttgccaacgc gttgaggaca acgcgttcca cccttatcgt
     1081 ctcagcgatt ctgtacattc tgtctaacat tcatggaact ccaaggcatt gatcacatag
     1141 ccatgggcgt gcacgacatt gaacgctcgg ccaaatggta catcgacgtc ctcgggttcg
     1201 agcggcttca tgaaggcatg tggaatgggg tgccaacttt tatcggcaaa ggaaataccg
     1261 gaatcgcctt gttcccagcg aaccaggagc cgaaaacgtc cacgcaccgc gaaattcgaa
     1321 tgcttcatct cgcctttcgc gcggaccggc agaattttcg tagtgcgcaa cgggaactga
     1381 aaaagcgcgg aatcaaattc gagttccagg atcacgagat cgcgcactcg atttatttcc
     1441 gcgatccgga cggccaccaa ttggagatta cgacctacca agtcacttaa tttcagtccg
     1501 aagttgtagc ggcgtttgtg tcaaacgccg aatcctttca acggacgctt ggcacaagcg
     1561 cccctacaat tcaggcgacg cgggccagca gttgttatgt ttttcccgct gccacaggaa
     1621 aagtgttcgt tgcgaccggc ttttggcatt gagcgccgaa tcgggaggat catcgatagt
     1681 tctgaaatca atgaattatc tggtagcgga gtatcaaaaa tttgggaagg gtaaccgcca
     1741 caatatgaaa acaatcacgc ttaagccgct tgttctttgt ctcgccgttg tcggtctcgg
     1801 cccaatagct tccgcgcaag atataaacct gcctgatgtc agccaggcgg cggaggtcaa
     1861 acagcgcatc ggtctgacgg acattacggt gaaataccat cgcccattgg tgaacggtcg
     1921 aaaaatttgg ggcggccttg ttccgtacgg ccaggtttgg cgcgcaggcg ctaatgaaaa
     1981 caccacgatc gaattcagcg atccagtttc cgtggagggc aagccgttgg acaaaggaac
     2041 ttatggtctg cacatgatcc cgaaccagga ttcgtggacg gttatctttt cgaaaacgaa
     2101 cacagcctgg ggcagctacg gttacgacca gaaggaagat gctttgcgcg tggacgtgaa
     2161 accacggcct ctcgctgaaa acgaagaggc actcgagttc gaatttgaaa atttgaaacc
     2221 ggattcgacg gcagtaacgc taaagtggga gaagttgggc gtcccgttca acatctcgat
     2281 caaggactcg gagcagacgc tcgcggacat tcgggcgcag ctaaaaggtc gcgcccagtt
     2341 tacgtgggac gccatggacg cagcggctca gttttgctta agcaaaaaaa ttaatctcga
     2401 ggaagcactg cgctgggcag acggctcaat ccaaaacgag gaaagattcg ataacctcag
     2461 caccaaggct gatatcctga aagctctgaa tcgacctgat gaggcaaaaa ctgtctggtc
     2521 tcaggcgctt gcgaaagcgg atgcaccgca gctgtattcg tacggccggc gctcgcaaaa
     2581 tcagaagcac ggcgccgaag ccatggaaat ctttaaagag gtggcaaaac gtttcccgaa
     2641 cggagtcttc ggatatctgg cccaggcccg cctcaaatct gcatccggcg atttcgcggg
     2701 cgcgctcagt gatgccaaac aggcgcaggc tgccgctcct agtgatgcgc agaagcagag
     2761 catccaggac ctgatcgacc gactcgaggc gaagcaggac atcaacaaat aacgcgcggc
     2821 tatctcggac tgcggacgaa tagcctcgat gggacgctca ccggaaagtg cgccgttgca
     2881 cctgacgcac caccgcatcg cgcgatcgga ggtcagagac caccgctaca aaaagcgctg
     2941 ttggcgagca gcctttatcg tcgcgatcgt cgccgtcgct agcacggcga attccgccga
     3001 tgcgccgccg ttgttgtctt ccgaccagat gaacggaagc gagattcagc tcgcactgca
     3061 aaagctcaaa atgcttggcc gcgttcttta catcgcggca catccggatg acgaaaacac
     3121 aaatctgatg gctttctggg cgaacggttc gctttacgac gccgcttatc tttcggtgac
     3181 gcgcggggac ggcggccaga atttgatcgg cccggaatta ggcgagcggc tcggcgttat
     3241 tcgaacagag gaattgctcg atgcgcgacg catcgaccac gcccgccaat ttttcacacg
     3301 agcgatcgat ttcgggtttt cgaagacggc tgacgaaacg atgcgaatct gggatcacaa
     3361 caaaattctc gctgacgtcg tgtggatcat ccggaatttc cgaccggacg tgatcgtaac
     3421 gcgcttcagt cccgcggatg aaaagacgca tggccatcat acagcgtcgg cgattctcgc
     3481 gcaggaagca ttctcagcag cagccgaccc aaatcgtttt ccagagcaac tggttttcgt
     3541 gaagccgtgg caagcgacgc gtttggtttg gaacacgtct ccgtttttct ttacgaaccg
     3601 taaccttcca ttcgatccga cagggttaat ggtcctggaa gccggcggtt acaatccgct
     3661 gcttggcaaa gcgtacacgg aaatcgcagc ggccagtatc agtatgcaca agagccaggg
     3721 cgttggcggg ctgccgcgac gcggggcgcg aaaagaatat ttcaaaccgt tggaaggttc
     3781 gccgatgacg agctcgcttt tcgaaggagt cgacacgacc tggtcacgcg ttgcgaattc
     3841 cgaatccgtt gccgcacaaa tctctcagat catttcaaag ttcaatcccg ccgatccggc
     3901 tgcgtcggtg gctgagttgt tgaagttacg acagacgatg agcggacttc aagatgagtc
     3961 ctggatagcg gagaaaaaag cacagctgga caaaatcatc gctgcatgtc tcggcttgca
     4021 tgtggaagcg tcgacaacaa cggaaacgtt tacccctggg caaaccgcaa caataaaact
     4081 cgacgcaatc aatcgctcga acgttccggt tacactacag gaagcacggt tcccggagac
     4141 cggcgattca aacaaaatcg atgcggcgct tccgtcgaat gaactcgtca cgaaggatct
     4201 ctcgtataaa attcccaacg acgctccgta ttcccagccg tactggcttc gaaaacccgg
     4261 ggcgctcggc acctttgccg tcgacgatca aaagcttatc ggtctgcccg agaatccccc
     4321 tgctcttccg gtcgaggtag ttttgcaagt cagcggacag gaactgcgct acaccgtgga
     4381 cacaaagtac cgtacagctg atacgctccc gactgaagtg ccccggccat tggtcattgc
     4441 gccgccagtt ttcgcgaacg tggcgaacta cgtggtggtg ttcccgacga atgaatcgaa
     4501 gactgtttca atacacgtca ccgcggctac cagccctgtg aaaggggaac tcaaactggc
     4561 tgcaccgcag ggatgggaaa tctctccggc gtccatcccg gtagacctga aggcagccgg
     4621 cgccgagatg atggctacct ttagcgtcaa accaccgaat caaaatggcg aaggcatgtt
     4681 gcgagcaatc gtttcgattg aaggccgcga ttattcgctg gagcgcgtcc gcatttccta
     4741 tccgcatatc ggcgtagaga cgctaatgcc accggcgcaa gccaaactag ttcgcgcgga
     4801 tatccgcaag aaaggcgacc gcatcggtta cattcccggc gccggcgatg atattccgga
     4861 aagcctgaga caaatcgggt attcagttaa cattttgagc gaaccggaca ttacggcgaa
     4921 gaacctggcg cagttctctg ccgtcgttct ggggattcgc gcctacaaca cgcaagatcg
     4981 aatttccaat tggttgcctg aagtgtttgc ctacgtaaaa gaaggcggag ttgctatcgc
     5041 acagtacaac acaaccgcgg accttaagac caaccaactg gggccatatc cattggagat
     5101 ttcgcgcgac cgcgtcactg acgaaaatgc acaggtgcgt gttctagcgc cggataatcc
     5161 gctcatgaac atcccaaaca aaatcacggc gaaggatttc gacggatggg ttcaggagcg
     5221 cggactttat ttccctaaca agtgggatcc cgcgtggacg ccgatcctgt catgcaatga
     5281 tccaaaggaa aaaccactcg atggcggttt gctggttgcg aagtcaggca aaggtttctt
     5341 tatctacacc agttattcct ggtttcggca gttgccggcc ggtgttccgg gagcctatcg
     5401 cttattcgcg aacatgttgt cattgggaaa atgagcgcac gggatgataa cgcggatgca
     5461 cgttcctggc gcaaagcgta cggcatggcg ctttcccttt ttgcggtgga ggtaatgctc
     5521 ctctacctgt ttactctccg gttctcgtga accggctgga ttatcttgtt ctcatcgcca
     5581 cgattctggc gattccgctc tacggcgtct ggcgaacgcg cggcagcgcc tcgttaggcc
     5641 aatatctcaa gggcgatgcg agtattcgat gggccacgat cggtctgtct gtgctcgcaa
     5701 cacaggctgg gccgatcacg ttcctttcca tgcccggcct ggcgtatgaa ggcggaatag
     5761 gctttatcca gaactatttt gggcaaccgc tcgcgctcat cgtcgtgtgc gcagtgttcc
     5821 ttccgatctt tcagcggctg aaagtttaca cagcctacca gtatctcggc gaacgattcg
     5881 atcggaagac gcagttactc ggcgcatttt tgtttctcat ccaacgaggc atcgctgcgg
     5941 gaattacggt ctacgcgccg gctattattc tttccgcgct gctcggctgg cgcttgaacc
     6001 tgaccatctg gctcgcgggt ggtctggtca ttgtctacac agtcatcggc gggaccaaaa
     6061 ttgtaagcat cacgcaacgc tatcagatga tcgtgatcct ggtcggcatg gcgattgcat
     6121 ttgcggtcgc ggtttaccgg ctctcccccg atctctcctt tgaaaacacg ctgtcgatcg
     6181 cgggcggcat gggcaaactg gaggccgtca atttctcggt cgacccgcac aagcgatata
     6241 cgttctggtc gggcttaatc ggcggctttt tcctcgcact gtcgtatttc ggagcggacc
     6301 aatcgcaggt gcaacgatat ctcgcggggg gctcgcttaa ggagagtcgt ctcgggttgc
     6361 tcttcaacgc cgtggtgaag gtgccaatgc agtttttcat tctgttgctc ggcgcgattg
     6421 ttttcatgtt ttaccaattc gaaaagccac cggtttactt caatcaaccc gcttacgaac
     6481 gtgcgatgga gaacgggtat gcgccacagc taacgcagtt gcagacgcaa ttcgatgacg
     6541 tcttcgcgca aaaacgcgca gcaattcgcg ctcttcccac tacatcgtca agcgagcgcg
     6601 atgcggcgat gaacaaggta cgcaaactcg atgcggaggc acacgcgtta cgcgatcaaa
     6661 ccaaggcagt tctggtgcaa gcgggcgtgg atccgaagag caaggaatcg gattacgtat
     6721 tcatcacttt tattcttcaa cagatgccgc acggagttgt cggattactc atcgcagtga
     6781 tcttgtgcgc caccatgtcc gcaatggcag caactctaaa cgctcttggg tccaccaccg
     6841 cgatcgattt ttatcggccg ttgattcggc cgaacgcgag cgaccatcat tatgtagtcg
     6901 cggcccaggc gctgacggca gcgtggggtt tgatcgccat aggcgtcgct tcatttgcga
     6961 gtttggtcga gaatctcatc gaagcaggca acattctggg ctcggtcttc tacggcagca
     7021 ttctcggtct cttcctgaca gctttcttta ttcgccgagt caccggatcg gcggtgtttt
     7081 ttgcggcgct gattgcgcaa acgcttgtct tcgtcttgtt cgcgacgacg aatatcggtt
     7141 acctctggta caatttcatt ggatgcgcag ccgtactgat tctcgcgtcg atcc
//
LOCUS       DATDAJ010000015         2471 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_65270, whole genome shotgun sequence.
ACCESSION   DATDAJ010000015 DATDAJ010000000
VERSION     DATDAJ010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65270"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="VIS53_00300"
     CDS             <1..676
                     /locus_tag="VIS53_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5766251.1"
                     /translation="ATLHDRDARVAIAGFYDRVKPLEDWERQAWRKLPVDGDTLIREE
                     TGVPELFGESGYNSVERIWARPTAEINGIGGGYQGQGTKTVIASHAFAKLTFRLVPEQ
                     KGEEILELAKTHLEKNLPKGVTMEVTTGHSGPWYLTDPHSAMGEAAQRALRKAFNRDA
                     ALIREGGSIPIVSEFREILGVETLLMGLALPDCRAHSPNENFPLENFEGGIRLNKAIL
                     QELASS"
     gene            768..1682
                     /locus_tag="VIS53_00305"
     CDS             768..1682
                     /locus_tag="VIS53_00305"
                     /inference="COORDINATES: protein motif:HMM:NF013073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEY5766252.1"
                     /translation="MKWLLILVIFFGAVEAAPSAQESLGSKIKKILAPTPTPNPARKH
                     RKRSTKTPTPSPTASAKRKKASPTPSPTPRSKSKRKKTSPTPTPGESPSATETPSASP
                     AESPEAGRGKKGWPNVSLSPDAIEDYENDPPKVRQILDAGLALTKQNLGYTYGSADPS
                     NGGMDCSGFIYYVLKQNGFPDVPRDSSGQYVWVRKAGNLYAVLSRKEDSFEFDDLKPG
                     DLLFWRGTYNIDRDPPITHTMIYLGREKRTNKRVMVGSSDGRTYDGKQRWGVSVFDFK
                     MPPPPKSGDAKISPVFVGYGRIPGLSEE"
     gene            complement(1799..1999)
                     /locus_tag="VIS53_00310"
     CDS             complement(1799..1999)
                     /locus_tag="VIS53_00310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766253.1"
                     /translation="MAIYLSAVIQRIYYIVCSVAGLCIAGLLGYFGAHIPLRVVLFGV
                     GLSTITLFIIFLWIERWLKKHY"
BASE COUNT          651 a          681 c          637 g          502 t
ORIGIN      
        1 cgccacgctt cacgatcgcg acgctcgcgt ggcgattgca ggattttacg atcgcgttaa
       61 accactcgaa gactgggagc gccaagcgtg gcgcaaactt ccggtcgatg gtgacacact
      121 gattcgcgag gagacgggtg tgcctgagct tttcggggaa tccggataca attcagtgga
      181 acgcatctgg gcgcggccga ctgccgagat caacggaatc gggggcggat accaggggca
      241 ggggacaaag acggtgatcg ccagccacgc gtttgcgaaa ctgacgttcc gtctcgtgcc
      301 ggaacagaaa ggcgaagaaa ttctggaact ggcgaaaacg catttggaaa agaatctgcc
      361 caaaggcgtc acgatggaag ttaccaccgg ccacagcggt ccgtggtacc tcacagatcc
      421 gcactcggca atgggcgaag cggcacaacg cgcgttgcgc aaagctttca accgcgacgc
      481 cgcgctcatc cgcgaaggcg ggagcatccc gattgtctcg gagttccggg aaattctcgg
      541 cgtcgaaaca ttgcttatgg ggcttgcgct acccgattgc cgtgcacact cgcctaacga
      601 aaattttcct cttgaaaatt tcgaaggcgg tattcgcctg aataaagcaa tccttcaaga
      661 gctcgcgtct tcctaatcga ctgtagcgtg cgctgtcctc agcgcatccg accgaactac
      721 tggattcgaa tcttcgctga ggacagcgaa cactacagtg tcgagttatg aaatggcttc
      781 tgattcttgt gatctttttc ggagctgttg aggctgcgcc ttcagcccaa gaatcgttag
      841 gctcaaaaat caaaaagatt ctggcaccga cgccaacgcc gaatccagct cgcaaacatc
      901 gaaaacgctc gacgaagacg cctacgccat cacccactgc ttctgcgaaa cgaaagaagg
      961 cttcgccgac tccatccccg acgccgagga gcaaatcgaa acgcaagaaa acgtctccta
     1021 ctccaacacc gggcgaatcg ccgtcggcaa cagagactcc gtccgcaagt ccggccgaat
     1081 cacccgaagc tggtcgagga aaaaagggct ggcctaacgt gagtctttcg ccggatgcaa
     1141 tagaagatta cgagaacgac ccgcccaaag ttcgccaaat cctggacgcc gggctcgcgc
     1201 taacaaaaca aaatctgggc tacacctatg gttctgccga tccatcgaac ggcggcatgg
     1261 attgttccgg tttcatttat tacgttctta agcaaaacgg cttccccgac gtgccgcgcg
     1321 attccagcgg gcaatatgtc tgggtccgca aagccggaaa tttgtatgcg gtcctgagtc
     1381 gcaaggagga ttcattcgaa ttcgatgatc ttaaacccgg tgacctgctt ttctggcgcg
     1441 gcacctacaa catcgatcgc gacccgccga tcacgcacac catgatttat ctcggccgcg
     1501 aaaaacgaac gaacaagcgc gtcatggtcg gatcgagcga cggtcgcaca tacgacggca
     1561 aacaacgttg gggtgtcagc gttttcgatt tcaaaatgcc gccaccacca aaaagcggcg
     1621 acgccaaaat cagcccggtc tttgtcgggt atgggcgaat ccccggctta agcgaggaat
     1681 gaaacgggaa aaagcggatg gcactattga atgactattt ggcaaagtcg cagcgcaaca
     1741 aaaacgccag ttcagccgta caactgcaac tggatgactt ttagatagtc gcgtctgctc
     1801 agtagtgctt tttaagccac cgctcgatcc acaagaagat gatgaaaagc gtaatggtgc
     1861 tcagccccac accgaaaagg acgactcgaa gcgggatgtg cgcgccaaaa taccccaaga
     1921 gtccggcgat acatagacca gcgacgctgc aaacaatgta atagatcctt tgaatcacgg
     1981 ccgaaagata aattgccaag ctgcaattac tccgcctccg atcattcccc ctgcacaaca
     2041 ccgcacgaat tttttgtaac taagtccccg tacaagttca cggcgtttcc acgtaaaaat
     2101 caacgcgaag gcgctgctga gcatcagcat gccgccaaca attatatcag gaatatttaa
     2161 cgggtgattc atgcgcgaag cttaaactac ctctcgtcct cagtttccat tggagtcgcc
     2221 gacggttttg attccaccac tgatgttagc tgaacaggag aacggtgaac gcggtgttcg
     2281 tatccgatga aggcaattgc aagtaacaca aagactgcga taagaacgac gcgctgttcg
     2341 ttcttcgaga gttcgaaaat gcggaacaaa cgtttcatct cactgtggct caacttcggt
     2401 atctgcgtag ttcgcgaaaa tggttttgct cattccgatc ccacaagctg tcattctgag
     2461 cgaagcgaag a
//
LOCUS       DATDAJ010000016         4892 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_65358, whole genome shotgun sequence.
ACCESSION   DATDAJ010000016 DATDAJ010000000
VERSION     DATDAJ010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4892
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65358"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            91..2337
                     /locus_tag="VIS53_00315"
     CDS             91..2337
                     /locus_tag="VIS53_00315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766254.1"
                     /translation="MNAARTRSTVLGALSAGLLVVVFCLILLWHNPLVFWNDDYELSV
                     LPVFADIARSWSEGHWPILSPYSWVCGNFAGEFQYGTFSLFVNAAVVLIWKFPLAFAQ
                     QAAALSIAHLFVLAIGAFLLARDREFSVALSIFVALIASLNGWIICWGATDWFGALGA
                     FTWLPWAWWGAERALDVRRAKWRFLWPAPFVYLLVTGGFPYTVLMLLLLLAWLAIKTM
                     WSRQVGKSRDGRESKVSPTFAVLPMLFGVVLGFGLSAPAWLALLDLVQGSARELQSAA
                     AHWQWRVPPAALPGLILPSWTVNWTDFSTRGRPHVAAELACGLVALSALIAGLFWHSR
                     QLVRQIKWELVLLLLVLLLCMIPTAGLFRWSFRWLPFFHLVLAICAAEALHLKPESPT
                     SATTALGLVVLASVAALIFHTTGVYAFPLTWILIGLAAVWVCLEFFLRSSDSRSWTPA
                     GITFCAFLATYLCLPTNTGVPRYNFSQELLKPSPLDPQRLYLSVYPWAELTYCIANKP
                     EPVGQTLRPGSTSMWAGLRFINGYSPIRAAGVAREFETSIHGEINPDVGSHLLNKQAG
                     SDGQLALVGVDGIVVAREVDMAPQPSSEWERVVSTEEGNVFHRRSAPFSRVRSVISID
                     SRPNEEFVLATISRINDSRNFVQADIDVPAGGRSALLTFSRPYFRGYKARIGDQKLAI
                     TSYRGLFPILEVPAGTHGRLTVAYRPAWLLWGGGMAALCGLIVLLGVVAAWRYLFRLE
                     RNPAPDCL"
     gene            complement(2351..3577)
                     /locus_tag="VIS53_00320"
     CDS             complement(2351..3577)
                     /locus_tag="VIS53_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEY5766255.1"
                     /translation="MPQVPIIMPQLGESIAEATIVDIKIKPGDEVVDDQEIIDVETNK
                     AVMGVTTPCKGKIDKITVQLKETYPVGAVLGYIEASEQDAARFAKHAPAPPLQKDVAE
                     EIPARADQEIKVAHASRLRGGDGNRDGRSTLPVPAITKGAAFMSPRVRARMAELQLTT
                     ADLAGIMGTGAGNRVTIKDLESFLHKIENQTAHEASKIRVGVADAMRRSWTRPLSTIG
                     SSVNLDPALQDRQSRDPKPGLGLYALRALALALAENPGAAAKFIGNRVVQSNSIDIGI
                     AVEAEDGIMVPVIRGAEKTSLADLTTKYKELIELARHRRISPDMQAGGIATVSNFGIF
                     GMEWGTPIPLPDQTLLLGLGAGKKIPSWDEPKNAFVPKTEAQIILSFDHRSIDGGGAS
                     RLLKRVIELLENPKEL"
     gene            complement(3744..4712)
                     /locus_tag="VIS53_00325"
     CDS             complement(3744..4712)
                     /locus_tag="VIS53_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5766256.1"
                     /translation="MSITYLEAIREAQAKLLREDDRVFIYGQDVGGAFGGAFKATKGL
                     AKEFPERVLNTPISEDAIVGTAIGAAMQGMRPIVEMQFADFSSIALNQILNNAGTHYW
                     RTGMPVPITVRLPSGGTKGSGPFHSQSMESLYAHYPGLIVMTPATVEDAYTMLIEAVA
                     IDDPVVYCEHKYLYYHLKADKLPDKGLPTGRARIAREGRDLTIVSYSAMTQESLAAAE
                     ELAREGLEIEVVDLRTVKPLDTDTVLASVARTGRLLCVGESFPWGGTNAEVIARVTNQ
                     GFHLLDAAPRRLNAKDTPIPYHPNLWSAHRPNAKNIVAKARALLRE"
BASE COUNT          909 a         1344 c         1385 g         1254 t
ORIGIN      
        1 aaggaacgcg aagtgacgct gcgaatcttc tcattgagcg ttgagcgttg agcgttgagt
       61 gttggacgtt gggcgttgaa agaaacagcg atgaacgcag cgcgcacgcg ttccacagtt
      121 cttggcgcgc tttcagccgg gttactcgtc gttgtcttct gcctaatcct gctctggcac
      181 aatccgctcg ttttttggaa tgacgattac gagttgtcgg tgctgccagt gttcgccgac
      241 atcgcgcgca gttggtccga aggtcattgg ccgatcctga gtccgtattc ctgggtctgc
      301 ggcaatttcg cgggcgaatt tcagtacggc accttttcgc tgtttgtgaa tgcggccgtg
      361 gttttgatct ggaaatttcc actggctttt gcacaacaag ccgccgcact ttcaatcgcg
      421 cacctttttg tcctcgcgat tggtgcattt ttgctcgcac gcgatcgaga gttttcagtc
      481 gccttgtcca tttttgtcgc gctgattgcc tcgttaaatg gttggatcat ttgctggggg
      541 gcgaccgatt ggttcggtgc tctcggcgca ttcacctggc tgccatgggc gtggtggggc
      601 gcggaacggg cgctcgatgt gcgccgagca aagtggcggt tcctctggcc tgcgccgttc
      661 gtctatctgc tcgtcacggg cggatttccc tatacggttt taatgctgtt gctcctcctt
      721 gcttggttgg caattaaaac aatgtggtcc cgacaagtcg ggaagagccg cgacggtcgg
      781 gaaagtaagg tctctcccac atttgcagtg ttgccgatgc tgtttggtgt cgtcctcggt
      841 ttcggtcttt ccgctcccgc gtggctggcg ctgcttgatc tggttcaggg ttcagcacgc
      901 gagttgcagt cagcggcagc acattggcag tggcgcgttc cgcctgcggc gctcccagga
      961 ttaattctcc catcgtggac ggtgaactgg accgattttt ccacacgcgg tcgtccgcat
     1021 gtggcagcgg aattggcttg cgggttagtc gctctttccg cgcttattgc cggactcttc
     1081 tggcattcac gtcaactcgt taggcaaatc aaatgggaac tcgtattgct cttgctagtg
     1141 ctcttgctct gtatgattcc aaccgccggc ctgtttcgtt ggagttttcg ttggctgcca
     1201 ttttttcatc tcgtattagc gatctgcgcg gcagaggccc tgcatttgaa gccggagtca
     1261 ccgacctctg ctacgacggc gcttgggctc gtcgttttgg caagcgtcgc agcgttgatc
     1321 ttccatacaa ctggtgtgta cgcttttccg ctcacttgga ttcttattgg attggctgcg
     1381 gtttgggttt gtttggaatt tttcctacgc agttccgatt ctcgatcgtg gacgcccgcc
     1441 ggtatcacgt tttgcgcatt cctcgctaca tatctctgcc ttccgacgaa cacaggagtg
     1501 ccgcgttaca atttttctca agaactgctt aaaccttcgc cgctcgatcc gcagcggctt
     1561 tatctcagcg tttatccatg ggcggagctt acctattgta tagcaaacaa acctgaaccg
     1621 gtcggccaaa cgctaaggcc gggaagcacc tcgatgtggg ccggattgcg atttatcaat
     1681 ggctacagcc cgatccgcgc cgcaggcgta gcacgcgaat ttgaaacaag cattcacggt
     1741 gaaattaatc ctgatgtggg aagccatcta ctgaataagc aagccggcag cgatggccag
     1801 ctggctttgg tgggggtgga cggcatcgtc gttgcgcgag aagtcgacat ggcgccgcag
     1861 ccgagttctg aatgggaacg ggtcgtttca accgaagaag gaaacgtgtt tcatcggcgc
     1921 agcgcgccgt tttcgcgcgt gcgctcggtc atctcaatag attctcggcc taacgaggaa
     1981 ttcgtgttgg cgacgatctc acggattaat gactcccgaa atttcgtgca agcggacatt
     2041 gatgtcccgg ctggtggtcg gtctgccctt ctgacttttt cgcgtccgta tttccgcgga
     2101 tacaaagcgc gcatcggcga tcagaaactc gccatcacat cttatcgcgg attatttcca
     2161 attctggaag ttccagctgg cacacatgga cgacttacag ttgcgtatag accagcttgg
     2221 ttgctgtggg gagggggtat ggctgccctc tgtggcttga tcgtcctgct cggcgttgtc
     2281 gccgcttggc gttatctttt tcgactcgaa cggaatcctg ctcctgattg cttatgacaa
     2341 cccgcggcgc tcagagttct ttgggatttt cgagcagttc gatcacgcgt ttgagtaaac
     2401 gactggcgcc gccgccgtcg atgctgcgat gatcgaagct taagatgatt tgcgcttcgg
     2461 ttttgggaac gaatgcgttt ttcggttcgt cccaggaagg aatctttttg ccggctccga
     2521 gcccgagcaa caacgtttga tcgggcaggg gaataggcgt gccccattcc attccgaaaa
     2581 tcccgaagtt ggaaaccgtg gcgatgccgc cggcctgcat gtcaggcgaa atccgccggt
     2641 gtcgtgcgag ttcgatcaat tctttgtatt ttgtcgtgag atcggcaagc gaagttttct
     2701 ctgcgccccg aatgacaggc accatgattc cgtcctcggc ttccacagcg attccgatgt
     2761 cgatcgagtt tgattgcacc acgcggtttc cgataaattt tgctgccgcg cctgggttct
     2821 ccgccagcgc aagcgcgagc gcgcgcagcg cgtaaaggcc gaggcctggc ttcggatcgc
     2881 gcgattggcg atcttgcagc gccggatcga gattcactga tgaaccgatc gttgaaagag
     2941 gacgtgtcca gctccgacgc atcgcatccg ccacgccgac acgaatcttt gaggcttcat
     3001 gcgctgtctg gttctcgatc ttgtgcagaa agctttcgag gtctttgatc gtcacgcggt
     3061 tgccggcgcc ggttcccatg atccctgcga gatcagcggt ggttagttgc agttcagcca
     3121 tgcgcgcgcg cacgcgaggg gacatgaaag ctgcgccttt cgtgatcgct ggaacgggca
     3181 aagtagagcg accgtcccgg ttgccgtccc ctcctcgcaa gcgggacgca tgcgctactt
     3241 ttatttcctg atcggcgcgc gcaggaattt cttccgcgac gtccttttgc agcggaggcg
     3301 ccggcgcgtg tttagcgaaa cgcgcagcgt cttgttcgct tgcttcaatg tagccgagca
     3361 ctgcgcccac gggatacgtc tcctttaatt gcactgtgat cttatcgatc ttgcccttgc
     3421 acggcgtagt cacgcccatg accgctttgt tcgtttcgac gtcgatgatt tcctgatcgt
     3481 ccacaacttc gtcgccaggt ttgatcttga tatcaacgat tgtggcttcg gcgattgatt
     3541 cgccgagctg cggcatgatg atcgggactt gcggcatagc tactcagtca ttccgagcga
     3601 agtcgaggct gcaacgcagc cccgaaggct ttcggggcga ggccaggctt tccatcccgt
     3661 tgcgcaacct taaacgtact tctgcgggat ctttcgactg cgggtcgctt cgctcaagat
     3721 gacagtttac gcgtggcata aatctattct cgtagcaacg cgcgcgcctt tgcgacgata
     3781 ttcttcgcgt tcggccggtg tgcgctccag agatttggat gatacggaat cggcgtgtct
     3841 ttcgcgttta gacgtcgggg cgcggcatcg agcagatgaa aaccctggtt ggtcacccga
     3901 gcgataacct ccgcgttcgt gccgccccag ggaaaggatt cgccgacgca aagcaagcgg
     3961 ccggtgcgcg cgacagacgc aagcaccgtg tcggtgtcca acggcttgac cgtgcgtaga
     4021 tcgacaactt caatctccag accttcacgc gcgagttcct ccgcagcggc gagagattcc
     4081 tgcgtcattg cgctgtaact cacaatggtg agatcgcgcc cttcgcgcgc aatacgcgca
     4141 cgcccagtcg gcagaccttt gtccggcaat ttgtcggctt tgagatggta atagagatat
     4201 ttgtgctcgc agtaaacgac agggtcatca attgccacgg cttctatcaa catcgtgtaa
     4261 gcgtcctcca ccgtggccgg cgtcatcacg atgagaccag gataatgcgc gtaaagcgat
     4321 tccatcgatt gactgtgaaa cggaccgctt ccctttgttc ccccggaagg caaacgaacg
     4381 gtgatcggca ccggcatgcc tgttcgccaa taatgcgtgc ctgcgttgtt gagaatctgg
     4441 ttaagggcga tgcttgagaa atccgcaaac tgcatttcta caatcggccg cattccctgc
     4501 atggcagcgc caatggccgt gccgacgatc gcatcttcac tgatcggtgt gttcaacacg
     4561 cgctccggaa attcctttgc caaacctttc gttgctttga acgcgccgcc aaatgcgccg
     4621 ccgacatcct gcccgtaaat gaaaacgcga tcatcttcgc gcaacagttt agcctgcgct
     4681 tcccggatcg cttcgagata ggtgatgctc atgcgggtaa tgacgaaatc cgaatgccga
     4741 atgacgaaac aatatcgaat gacgaatgac taaaatggag gacggcagcg ttcgtcattt
     4801 gagcattggg aattccttcg acattcgtgc ttggtcattc ctcgtcgaca tgatcgacga
     4861 ggtcacgtgc ggataacgcg caccaatctt ct
//
LOCUS       DATDAJ010000017         4349 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_65411, whole genome shotgun sequence.
ACCESSION   DATDAJ010000017 DATDAJ010000000
VERSION     DATDAJ010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4349
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65411"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VIS53_00330"
     CDS             complement(<1..564)
                     /locus_tag="VIS53_00330"
                     /inference="COORDINATES: protein motif:HMM:NF013406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015655 - alanine:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0032328 - alanine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HEY5766257.1"
                     /translation="MQEFEKFVGKLSDFVWGPPLLILLLGTHIFLTFRLRFIQRYIGK
                     AIKLSLQRSHEGQGDVSQFGALTTALAATIGTGNIVGVATAIAAGGPGAVLWMWLTGV
                     FGIATKYSEAVLSVKYRIKTERGRMAGGPMYVLERGMKQKWLGVIFAILTTISAFGIG
                     NMVQANSISTMVNETFHIAPWITGVVMA"
     gene            complement(743..2386)
                     /locus_tag="VIS53_00335"
     CDS             complement(743..2386)
                     /locus_tag="VIS53_00335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766258.1"
                     /translation="MDYGTQPYDPYDEPYTRPPERINYFAWTVAILLLTGFALAAWLG
                     SFYIFNQPERPDSYRILQKLHKIEQPKRFELTAAPPGEFLNASDLYERYVGMGAAELA
                     KTNAELLRNYIRNFQQVRGLVPYVVGRYTIIGVRQLRPDDVFTTGMAALTAAVDSGEL
                     LMEHIYPAKPEALPLMKQTLAVGLELKLERTHDISAVIHAERLIDGRILVTTVPLLYG
                     SYTVTRGLGTFRLEPPLSLNLVGGWPLFKSQERASIEQRLAEYRQKMAEAQGGPIAIP
                     GASATPPPAKNELVRIEQARPVAPLAMTPPVVASNEKLTKAMPAPKGKKGKKQKLESP
                     PPAASPAQAVVAQNKPAPGGTPMTVASALAPPSALNLAIATPMPGSKPSDIGTASIAQ
                     SSPVAGTPVPVLPAQPVPPATSNVALASNAGGGNWKTFAPGKMPLGRLIATGDLNDVV
                     DHGVAGERIYLKGQFVVNFVDENKAVLRPRTTLTSKVLHFGAGSSTRIIVEFPRGYTP
                     PPQGAVVNRDETRPYEITEVRKQEDGQLNVFVREIMQPN"
     gene            complement(2414..2749)
                     /locus_tag="VIS53_00340"
     CDS             complement(2414..2749)
                     /locus_tag="VIS53_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HEY5766259.1"
                     /translation="MINVTDNAVRQLQSLLSQRPENSPRGLRVEVAKGGCSGLHYEMT
                     LGERKEGDSTVERDGVQFFIDDESVSYLRGATLDFTDGLTGTGFRIVNPNASRTCGCG
                     SSFEAAQSA"
     gene            2859..>4349
                     /gene="mutL"
                     /locus_tag="VIS53_00345"
     CDS             2859..>4349
                     /gene="mutL"
                     /locus_tag="VIS53_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEY5766260.1"
                     /translation="MGRIRLLSETVASQVAAGEVVERPASVVKELVENSLDAGARNVD
                     IAIRRGGISLVRVIDDGCGMGRDDALLSLERHATSKIRSAADLQAVATLGFRGEALPS
                     IASVSRFRVSTREAGAIAGTEIIVNGGKIDVVRDGGEAPGTQAEVRSLFYNLPARRKF
                     LRSENTETRNIEHQVHLQAIGHPEIGFSLMRDDRIVFQLPGTATLGDRIRDLYGVELL
                     QRLVGVKGAASPKIGISGFIGQAGLSRQTRSQQLVFVNGRAIESNLITGAVREGYHTA
                     LMKGQYPVTFLFVELDPAAVDVNVHPAKREVRFRDPNGVREAVVRCIQQTLEHARAEW
                     QEKFRTPVRQEPATAVSVRATPDLTLRSEVTAPEVTHRELPHLDVVAGVADPGRALGP
                     EIVRQAPRQPERRFDLAADARALQPQQPVTKPAQQQFEIIGVLSKLYVLMENANGLVL
                     VDQHAAHERVLFEELRRRMEQQGVPTQKLLLPQTFDVPPRDADWIEQ"
BASE COUNT          923 a         1208 c         1252 g          966 t
ORIGIN      
        1 cgccatcacc acgcctgtaa tccatggagc gatgtggaat gtttcgttta ccatcgtcga
       61 aatggagttt gcctggacca tgttcccgat gccgaatgcg gaaatggttg tgaggatcgc
      121 gaaaatcacc ccgagccatt tctgtttcat gcctcgctcg aggacataca taggacctcc
      181 cgccattcgt cccctttcgg ttttgatgcg gtatttcacc gagagaactg cttcggaata
      241 tttcgtggca atgccgaata cgccggttag ccacatccag agcaccgcgc caggaccgcc
      301 ggcagcgatt gctgtggcga cgccgacgat attcccggtg ccgatggtgg ctgccaacgc
      361 agtcgttagg gcgccgaact ggcttacgtc gccctgtccc tcatgcgatc tttgcaagga
      421 aagcttgatc gccttgccga tgtatcgctg gatgaagcga agcctgaacg tgagaaaaat
      481 gtgcgtgccg agcaaaagaa tcagcagcgg tggtccccag acaaaatcgc tgagttttcc
      541 gacaaatttt tcgaattctt gcatgagact ccttgtttga gcggtaagaa ctacagagtc
      601 ggggtgtgga aggcgagaga gaaaatgcaa ccacgcaaaa atttccgcgg aagttgtagg
      661 gcgtttctgt gaaacgccaa tcctcgtcca tgggtgcctg acacagacgc cctacaattc
      721 gatccgaaac gcgaacagcc gatcaattcg gctgcatgat ttcgcgcacg aagacgttca
      781 gttgtccgtc ttcttgtttg cgcacttcgg tgatctcata gggccgcgtc tcatcccgat
      841 tgacgacggc gccttggggc gggggggtat aaccacgggg aaattccaca atgattcgcg
      901 tcgatgaacc ggctccgaag tggagcactt tgcttgttaa tgttgtgcgc ggacgcagca
      961 ccgccttgtt ctcatcgacg aaatttacca cgaactggcc tttcaagtaa atgcgttcgc
     1021 ccgcgactcc gtgatcgact acatcattca aatcgccggt cgcgatcagt cttccgagcg
     1081 gcatcttgcc tggcgcaaag gttttccagt tgccgccgcc ggcattggaa gccagagcaa
     1141 cattggaagt agcgggcgga acaggttgag caggaagaac aggtacgggc gtccctgcaa
     1201 caggcgaact ctgtgctatc gatgcagttc caatatctga aggtttagat cctggcatcg
     1261 gcgtggcgat agcaaggttt aatgcgcttg gaggtgcaag ggctgacgca acggtcatgg
     1321 gtgtaccgcc cggcgcaggt ttgttctgag cgacgactgc ctgcgcgggg ctcgctgccg
     1381 gcggcgggga ctcgagcttt tgttttttgc cctttttccc cttcggcgcc ggcatcgctt
     1441 tcgtcagctt ctcattgctt gccacgactg gtggagtcat ggcaagcggc gcaacaggtc
     1501 tggcttgttc gatgcgcacc agttcatttt tggcaggcgg cggagtggcg ctcgcgcccg
     1561 gtatggcgat cggtccccct tgagcttctg ccattttttg tcggtattcg gcgaggcgtt
     1621 gttcaatgga agcgcgttcc tgcgatttaa acaatggcca acctcccacg agattgagac
     1681 taagcggtgg ttcgaggcga aaggtgccga gaccgcgtgt aaccgtatag cttccataca
     1741 gcaaaggaac cgttgtcacc agaattcggc cgtcgattaa tcgctcggcg tgaatcaccg
     1801 cagaaatgtc gtgtgtgcgc tccaatttca attccaaccc gacggcgagc gtctgcttca
     1861 tcagaggcag ggcttcgggc ttggcgggat aaatgtgttc cattagcagc tcaccactgt
     1921 cgacggcagc ggtcagcgcc gccataccgg tggtaaacac atcgtccggg cggagttggc
     1981 gcaccccaat gattgtgtac cggcctacca cgtacggaac caggccgcgc acctgctgaa
     2041 aattccgaat gtaattgcgc aagagctcag cgttcgtttt cgcgagctcg gcggccccca
     2101 ttccaacgta gcgctcgtaa aggtcgcttg cgttaagaaa ttcgcctggc ggcgcggctg
     2161 ttagttcgaa gcgtttcggc tgctcaatct tgtgcagctt ctgcagaatt cgatagctgt
     2221 caggccgctc cggttggttg aagatgtaaa aacttccgag ccaggctgcg agcgcgaagc
     2281 ctgtcaaaag caaaatcgcc accgtccacg cgaaataatt tatgcgttcc ggcggacgcg
     2341 tgtacggctc gtcgtacgga tcgtacggtt gagtgccata gtccatcagt tcagcgcgcg
     2401 acgattcccg gtttcaagct gattgcgccg cttcgaacga cgaaccgcat ccgcacgtac
     2461 gcgacgcgtt tggattgacg attcggaaac ccgtgccggt caaaccgtca gtgaaatcca
     2521 gcgtcgcgcc ccgcaagtag gagacgctct cgtcgtcgat aaaaaattgc acgccatcgc
     2581 gctcgactgt tgaatcgccc tcttttcgtt cgccaagtgt catctcgtaa tgcagaccgg
     2641 aacagccgcc tttggccact tctacacgca aacctcttgg cgagttctcc ggtcgctgcg
     2701 aaagaagact ctggagctgt cgaacagcgt tgtccgtgac gttaatcatc gtgctcaaaa
     2761 ataccgcttc gaggcgtcca agtcaaagta gcgcatgcct ccggcttgcg agtcttctgg
     2821 cttttgcaag cgggacgcat gcactacttt ttttaaagat gggccggata cgattgcttt
     2881 ctgagaccgt ggccagccag gtggcggccg gcgaagtggt ggagcgcccg gcgtcagtcg
     2941 taaaggaact ggttgaaaac agtctcgacg caggcgctcg caatgtcgat atcgccattc
     3001 gtcgcggtgg aatttcgctg gttcgcgtga tcgacgacgg ctgcggcatg ggccgcgatg
     3061 acgcgctgct ttcgctcgag cgacatgcca ccagcaaaat ccgttctgct gccgaccttc
     3121 aagcggtggc tacactcggg tttcgcggcg aagccttgcc tagtatcgct agtgtttcgc
     3181 gattccgggt gagtacacgt gaagcgggtg cgatcgccgg cacagaaatc attgttaatg
     3241 gtggcaaaat agacgttgtc cgggacggcg gtgaagcccc aggcacgcaa gccgaagtgc
     3301 gatcgctttt ttacaacctg ccagcgcgca ggaaatttct tcgttcggag aacaccgaaa
     3361 cccgcaacat cgaacatcag gtccatctgc aagcgatcgg tcatcctgag attggcttct
     3421 cgttgatgcg tgacgatcgc atcgtgtttc agttgccagg tacggcaaca ctcggcgatc
     3481 ggatccggga cttatacggc gtcgaattgt tgcagcgctt ggttggagtg aaaggcgctg
     3541 catccccaaa aattggaatc agtggtttta tcggtcaggc gggtctcagc cggcaaaccc
     3601 gtagccagca gctcgtgttc gtaaacgggc gtgcgattga aagcaatctt atcaccggcg
     3661 ctgtccgcga agggtaccac acagctctta tgaagggaca atatcctgtt acgttccttt
     3721 ttgttgaact cgatcccgcg gctgtcgatg taaatgtgca tccggcaaaa cgcgaagtcc
     3781 gttttcgcga tcccaacggc gtgcgcgaag cggtggttcg ctgtattcag caaacattgg
     3841 aacacgctcg ggctgagtgg caggaaaaat ttcggacacc agtccggcag gaaccggcca
     3901 ccgcggtttc cgttagagca actcccgatc taaccctgcg ctccgaagta accgcgcccg
     3961 aagtgacgca tcgcgaattg ccgcatctcg atgttgtagc cggggtcgct gaccccggcc
     4021 gggcgctagg gccagaaatt gtacggcagg cgccccgcca gccagaacgc cgcttcgatt
     4081 tagcagccga tgcgcgtgca ctacaaccac agcagcccgt tacaaagcct gctcagcagc
     4141 aattcgaaat catcggcgtg ctcagcaagt tgtatgtcct gatggagaat gcgaacggcc
     4201 ttgtcctcgt ggatcaacac gccgcgcacg aacgcgtcct gttcgaagaa ttgcggcgca
     4261 gaatggaaca gcagggagtg cccacgcaaa agttgctttt gccgcaaaca ttcgacgtgc
     4321 cgccgcgcga cgccgattgg atcgagcag
//
LOCUS       DATDAJ010000018         8197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_66472, whole genome shotgun sequence.
ACCESSION   DATDAJ010000018 DATDAJ010000000
VERSION     DATDAJ010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8197
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66472"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VIS53_00350"
     CDS             complement(<1..406)
                     /locus_tag="VIS53_00350"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY5766261.1"
                     /translation="MFQRTGDAATRFCVRQGIHPDAISYLSIVAALIAAICFWKSGAR
                     RWLLIVAPLFCYLRLWFNMLDGLVAFAAGKASRRGEILNDLPDRISDIAIFVGVAHSG
                     LMNPLIGYWAAIFAVLTAYVGLFGQALGVQRQF"
     gene            complement(936..1118)
                     /locus_tag="VIS53_00355"
     CDS             complement(936..1118)
                     /locus_tag="VIS53_00355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766262.1"
                     /translation="MNTPKNKKQASATESGINRRKRTRDKLIRLDDLIPQKDVKGGHQ
                     VLFGVTEKTQTNEKGK"
     gene            complement(1306..2325)
                     /locus_tag="VIS53_00360"
     CDS             complement(1306..2325)
                     /locus_tag="VIS53_00360"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY5766263.1"
                     /translation="MQARPSKLRLENLTTSNDAMARCLQLAALAARSDVPVVLLGETG
                     TGKTLLAQAIHNSSARANRPFIAFNASAISDTLLESQLFGHERGAFTGAQQTVKGKFE
                     LANGGTLFLDEISEMSPLAQVKILRVLEYGEFERLGSERMLTSNARIICASNCSLRER
                     VRLGKLREDLYQRLNGLTLLIPPLRERLEELPALIATELQTAGAKEGKQFTAIHPEAM
                     EKLLRHDWPGNLRELSHTARTMTLFCNSSVILPEHVVFPSDLKPDRAPTGTDKPAPLL
                     TGNHQDADVSTDLSLEHAMQRHVRFVYDQANQNQRRAARLLGISRSTLSRYLRDMLKN
                     KAPLV"
     gene            complement(2437..5550)
                     /locus_tag="VIS53_00365"
     CDS             complement(2437..5550)
                     /locus_tag="VIS53_00365"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEY5766264.1"
                     /translation="MKTQDSEILRRSSVFRFVSDEHFDAIEPLLQEEHYEFGDVIVKQ
                     GDPANSFYVLTNGRARALKIKPDGAEIPLGVLKPGDCFGEAALAEGGTRNATVRCSTA
                     VDVLWIDRDDFLQLVRRVPDLKHYIETTGRNRALQSFLYQFSNFGRLPNPVLRGMIDK
                     LTPVTFEKGNLIIREGDNAGPLYVIEKGRARAFAGLNGRERNLAFYREGDFFGELSIL
                     NDSPRSASVEAFTDCQLLSLEPKSVRDLRRRFPDFDKLLKERLALYQAKTEARVPLDF
                     ATELLPAETQVHDKVQLDGQQPPEKTDGQEEPFADERGLFRKHGKRLRKIDHVMQIDE
                     MDCGAACLGMICRHFGRKVSLARIRQLCHTATDGTSLKAISRAAIELGLAARPLKVSF
                     RNLPHMPLPAIVHWEGNHWMVLYDVDEQSVRVADPALGLRKVPRREFETKWTGYAALF
                     DYTPAFEAAPESKPTLAWVLPFLSRFKVILLQVLGLAVAVSFLQLLFPVFTQIVVDKV
                     IVENDIGLLKIILLGMFVALIFVQFATLAQEYLLAFAAVRLDTAVLDFLSRRLLSLPM
                     SYFTNRRTGDIQRRLEGARQVRQLVVQQGVGALLAVVFLVGALVLMAMYSPLLTIVFL
                     ATTPFYVGLMIFSIKVLRPLYHGMEESQAKYSSHQIDAIKGIEAVKAAAAEDSFRDAM
                     LNEFLSVSQKRFKATFIVMSWDSVLQTIGLLSTAIFLWVGALQVIHGNLSVGGFVAFS
                     SLTAMAYAGILRALGVWDNVQLASVLLNRLNDIFEQEPEQGHDRSRLVPVRSLEGRVE
                     LRGVSFKYGGPESPDILKNIMLDLLPGRTVAVVGRSGSGKTTLIKLIAGLLEPTEGAI
                     FFDTVNLKTLNYRDVRRHIGTVLQENHMFNDTIARNISIGDPEPDVGRVLAAAQAAAA
                     HEFIMRLPLGYETKIGESGLSLSGGQKQRIAIARAIYNNPPVLIFDEATSALDTESER
                     AIQDNLARLLVGRTTIVIAHRLSTIRDAHSIVVLEKGSVAEIGTHDELMAQRGLYYYL
                     SSQQLGI"
     gene            complement(5547..6635)
                     /locus_tag="VIS53_00370"
     CDS             complement(5547..6635)
                     /locus_tag="VIS53_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766265.1"
                     /translation="MSSRESVSPYDVIVCACGTSQYTARDAIDAAIFRGTLQEKWQTF
                     LRHIAAKERADELELELDESAISAAAEEFRYRHDLITAEETEAWLANRGLTFDRFSDY
                     FARQYCVGAVDEGFSSEQIRYTSAPQELRDLFLAELILSGALEDMSIKLIWRLAARCA
                     GQEPTAEAIAAEERKFLHRSGIEPAQLADWLEEMGRDSQWLNGMLAIEAAYGTHCDRL
                     LVPEARQRELMASRMHLTRFEIELIELESHDAAQEALFCVQEDGMSMEEVAIEGRYPY
                     RRADFLLGDLPPDAQQKYFSGSPGDVLEPISHGDGFELCRIVKKIEPRLEDPSVKSRI
                     DQGLLDQYFSHLTTKYTSPRLSVPVLME"
     gene            complement(7110..7319)
                     /locus_tag="VIS53_00375"
     CDS             complement(7110..7319)
                     /locus_tag="VIS53_00375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766266.1"
                     /translation="MKDQLRDIAGHFALSISAALAVALSGHLGYDLLHFGIAERAHRL
                     RADVAQDVRCQQHTGGRLIVRCLDD"
     gene            complement(7316..>8197)
                     /locus_tag="VIS53_00380"
     CDS             complement(7316..>8197)
                     /locus_tag="VIS53_00380"
                     /inference="COORDINATES: protein motif:HMM:NF022588.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2911 domain-containing protein"
                     /protein_id="HEY5766267.1"
                     /translation="LRSLLLSALFALPFVAGPLLPGSLRAADEKKIEFPSASQHSVVK
                     QRVGLTDVEVDYSRPNKNDREIFGGLVPYGNLWRTGANAVTKIKFSDAVTLGGKEIPA
                     GEYALFTIPTANEWTIILSKDAKVQSTADYKQENDAVRLTAKPEPFPVAIETFTIALN
                     DVKGASATLDFLWDKTRVPVKLTTDDVEQVSKQLEAVAGGTTPLDARTAYQAAAFYYD
                     NNKDMNQAAKWIDQALEKNPDAYFMHYKKAQIQAKLGSKKEATASAQKAIDILKKDKA
                     PDESAINNAQQIIDSSK"
BASE COUNT         1877 a         2234 c         2186 g         1900 t
ORIGIN      
        1 caaactggcg ttgaacgccg agcgcttgtc cgaatagacc gacgtacgcg gtgagcaccg
       61 cgaaaattgc tgcccaatac ccgatcagcg gattcatcaa cccgctgtgc gcaaccccga
      121 cgaaaatcgc gatatccgaa atgcgatcgg gcagatcgtt caggatttca ccacggcggc
      181 tcgccttccc tgccgcgaag gcgaccagac cgtcgagcat gttgaaccaa agccgcaaat
      241 aacaaaaaag cggtgcgacg atgagtagcc aacgtctcgc gcccgatttc caaaaacaaa
      301 ttgcggcgat cagtgccgct acgatcgaca aatacgaaat cgcatcggga tgaattccct
      361 gccgcacaca gaaccgcgta gcagcatctc cagttcgctg aaacactgcc gcaattggcc
      421 gccgcgaaga agattggtga cccgacatcg ctgacatttt gcagagcagc gaccccgtca
      481 ggcaatacaa acgacgatag agttagtgcg ggttgaaaag aacggcgagt acaaagtcac
      541 cccaaaactt gtcggcttgc tgaagagcgg caccgttgca gcggctgacg gcgcgtcaga
      601 cgtcaacaaa ggattcgtcg gcgacggcgg gatgaagtcg agtgaaattt gttgctatcg
      661 gctcgaagct cgtttactag cggattgttc tggggggaac agccgcctct cataccttct
      721 cggtgtgggg ggcggtcatt ttttaatcaa ggagtcggat cacagatata gagccgcact
      781 tcgtgaccga accaccagtg cgattcctga ccacgttagg tgcgaccggc gcggttgagt
      841 ctcgggatct ggggagaaaa gccgcccttg gcatcttttt tcggtttcaa atccccgact
      901 ttaatctctt tcttggtttc ttttcgctgc gccatttatt tccctttttc gttggtttgt
      961 gttttttcag tgacaccgaa gagcacttga tggccgccct taacgtcttt ttgtggaatc
     1021 agatcgtcga ggcgaatcaa tttgtctctt gtgcgcttgc gcctgttaat tcctgattcc
     1081 gtggcggacg cttgtttttt gttcttcggt gtattcacct tgtctctctc ctgatatcag
     1141 catccgtgcc aagtcgccac cggcagggac aaaggcagag atggttgtta cgtttattgt
     1201 taaaccagag gcatttatgc agccaattgt ttctctgatc gccaaaacgg ctactccccg
     1261 ttaaacgaaa tttcaacttc attattatgc catctcgcct cagatttaga ccaatggtgc
     1321 tttatttttg agcatgtctc ggagatagcg ggagagagtc gaacgagaaa taccgagtaa
     1381 tcgtgctgcg cgtcgttggt tctgatttgc ttgatcataa acgaatcgaa catgccgttg
     1441 catcgcgtgt tcgagtgaga ggtccgtact aacgtcagca tcctgatgat tgcccgtgag
     1501 cagaggcgct ggtttgtcag ttcctgttgg cgcccgatcg ggcttcagat cggaagggaa
     1561 aacgacatgc tcgggtagaa tcacggaact gttacaaaaa agagtcatgg tgcgcgccgt
     1621 gtgactcaac tcgcgcagat taccgggcca gtcgtgacga agcagctttt ccatcgcttc
     1681 aggatgaatg gcggtgaact gtttgccttc tttagctccc gcagtttgca attcagtggc
     1741 aatcaatgcg ggcagctctt caaggcgttc tcgaagcggg ggaataagca gggtaaggcc
     1801 gttgagtcgc tgatacaggt cctctcgaag ttttcccagc cgcacccgtt ctcgcaacga
     1861 acagttggaa gcgcagatga ttcgcgcgtt ggaagtgagc atccgttcgg agcccagacg
     1921 ctcaaattcg ccgtactcca gaacacgcag gatttttacc tgtgcgagag gactcatttc
     1981 tgagatttcg tctagaaaaa gcgtgcctcc attggcgagt tcgaactttc ctttaacggt
     2041 ttgttgtgcg ccggtaaaag ctccgcgttc gtgaccaaac aactgactct cgagtaacgt
     2101 gtcgctaatc gccgaggcat taaatgcgat gaatgggcga tttgctcgcg ctgatgaatt
     2161 atggattgcc tgggcaagca aggttttgcc cgtgccagtc tcaccgagca gcacgactgg
     2221 aacgtcggac ctcgcggcga gcgctgccaa ctggagacaa cgcgccatgg cgtcattgct
     2281 cgtagttagg ttttcgagcc ttaacttgga tggccgtgcc tgcattagtg gttattgctt
     2341 tatgttctca cgtaattgcc ggatcggttc gaatgcatac tcaatcagcg tccggccagc
     2401 aacgttgagt agattatgag ctcatcgaaa tcttgtttag atcccgagtt gctggctcga
     2461 aaggtaataa tacagaccac gctgcgccat taactcatca tgggtgccaa tctcggcaac
     2521 actgcctttt tcaagcacta cgatagaatg cgcgtctcga atggtgctca aacgatgcgc
     2581 aattacaatt gtggtgcgcc ccaccagtaa tcgagcgagg ttgtcttgga tcgctcgttc
     2641 ggattctgta tccagcgcgc ttgttgcctc gtcaaagatc aacaccggtg gattgttgta
     2701 gatcgctcgt gcgatagcta tgcgctgctt ctgaccgccg gacagggaaa gaccgctttc
     2761 tccaatcttt gtctcgtaac cgagcggcag acgcatgatg aactcgtggg cggcggcagc
     2821 ttgggcagct gcaagaacgc gaccgacgtc cggctcagga tcgccaattg aaatattccg
     2881 cgcgatcgta tcgttaaaca tgtgattttc ttgaagaacg gtcccgatgt gccgtcggac
     2941 gtcgcgataa ttcagagtct ttaaattgac ggtgtcgaaa aagatcgctc cctccgtagg
     3001 ctcgaggagg cctgcgatta atttgatgag ggttgtcttg ccgcttccgc tgcggccaac
     3061 gactgccacc gtgcgtcccg gcaaaagatc gagcatgata ttctttaaga tgtcgggtga
     3121 ttcaggtccg ccatatttga aactgactcc gcgcaactca acgcgccctt cgaggctgcg
     3181 cacggggacg aggcgggacc gatcatgacc ctgctccggc tcctgttcaa aaatgtcatt
     3241 cagacgattc agcaggacag aagccagctg cacgttgtcc caaactccga gcgctcgcaa
     3301 aatccctgca tacgccattg cagtgagtga gctaaacgca acaaaaccac caacactcaa
     3361 attgccgtga atgacttgca gggccccgac ccacaggaaa atcgcggtag acaggagacc
     3421 aatagtttgc aggacgctgt cccacgacat cacgatgaac gtcgccttga aacgtttttg
     3481 cgagaccgag agaaactcgt tcagcatggc gtcgcgaaat gagtcctcgg ccgctgccgc
     3541 ctttacagcc tcgatacctt tgatcgcatc gatctgatgc gaactgtatt tggcctgact
     3601 ttcttccatc ccgtgataaa gggggcgcaa aacctttatc gaaaaaatca ttagtcccac
     3661 gtagaaaggc gttgttgcca gaaacacgat ggtcagtagt gggctataca tggccattaa
     3721 aacgagtgcg cctaccagaa aaacgactgc cagtaacgcg ccaactccct gttgcacgac
     3781 caattgccga acttgcctcg caccctcaag gcggcgctgg atgtcccccg ttcgacgatt
     3841 tgtgaagtaa ctcatcggca gagacaaaag tctccggctc aagaaatcga gaactgccgt
     3901 gtcgagacgc acagccgcaa atgccagcaa gtattcctgc gcaagcgtgg caaactggac
     3961 gaaaatgagc gctacgaaca tgcccagcag aattattttc agcaggccga tgtcattttc
     4021 gacgatgact ttatcaacga cgatttgggt aaatacaggg aacagtaatt gcaggaaact
     4081 gacggcgaca gctaacccca gcacctgcag caagatcact ttgaatcgcg aaagaaacgg
     4141 cagaacccaa gccagtgttg gcttactttc cggagctgct tcgaatgccg gcgtgtaatc
     4201 gaacagtgct gcgtagccag tccacttcgt ctcaaattct cttcgcggaa ctttgcgtag
     4261 cccgagcgcg ggatcggcga cgcgcacaga ttgctcatca acatcgtaga gcaccatcca
     4321 atggttgcct tcccagtgca ctattgccgg aagcggcatg tgcggaagat tgcggaacga
     4381 gactttcaat ggacgcgccg ccagcccaag ttcgatggca gctcgagaaa ttgcttttag
     4441 gctggtgccg tcggtcgccg tgtgacagag ctgtcgaatc cgcgccaagc ttaccttgcg
     4501 accaaagtga cggcagatca ttccgaggca ggcagcaccg caatccatct cgtcgatctg
     4561 cataacatga tcgatctttc ggaggcgctt gccgtgcttg cggaagaggc ctcgctcgtc
     4621 ggcaaacggc tcttcttggc catcggtctt ctcagggggc tgttggccgt cgagctgcac
     4681 tttatcgtgc acctgtgttt cggcagggag cagttcagtc gcgaaatcga gcggaacacg
     4741 tgcctcggtt tttgcctgat aaagggctag ccgctccttt aacaatttat cgaagtctgg
     4801 aaatcgccgg cggaggtctc gtacggactt cggttcaagg gaaagcaatt gacagtctgt
     4861 gaatgcttct accgatgccg agcggggcga gtcgtttaag atcgacaatt caccaaagaa
     4921 atcgccttcg cgatagaagg cgagattgcg ctcacgtccg ttcaagccgg cgaatgcgcg
     4981 cgcccgtccc ttctcgatta cataaagcgg cccggcgttg tccccttctc gaatgatcag
     5041 attgcctttt tcgaatgtga cgggggttag cttgtcgatc atcccgcgca acacgggatt
     5101 cggcaatcgg ccgaaattgc tgaactgata aagaaaactt tggagagcgc ggttgcgccc
     5161 ggttgtctcg atatagtgtt ttaggtcggg cacgcggcgg acaagttgaa gaaagtcatc
     5221 gcgatcgatc cacaggacat cgaccgcggt gctgcagcgc acggtcgcat ttcgggttcc
     5281 gccctcagct aaagcagcct ccccgaaaca gtcccccggc tttagtactc ccaatgggat
     5341 ttccgcacca tccggcttga ttttcagggc acgcgcacgc ccgtttgtca ggacgtaaaa
     5401 tgaattggcc ggatcgcctt gttttacgat tacgtcaccg aattcataat gttcttcctg
     5461 caggagtggc tcgatcgcgt caaaatgttc atcggaaaca aagcgaaata ccgatgaacg
     5521 ccgcagaatt tcgctgtctt gggttttcat tccattaaaa caggaacgct cagccgtggg
     5581 gacgtatatt ttgtcgtcag gtgtgaaaaa tactggtcaa gcagtccttg gtcgatccgt
     5641 gatttgaccg atggatcctc tagtcgcggc tcgattttct taacgatgcg acacagttcg
     5701 aatccgtcgc catgcgagat cggttctaac acgtcaccag gcgacccgct gaagtatttc
     5761 tgttgcgcat ccgggggaag atctcccagc agaaagtccg cacgtcgata cggatacctt
     5821 ccttcaatcg caacttcctc cattgacatc ccatcctcct gcacgcaaaa cagcgcttcc
     5881 tgcgcggcat cgtgtgattc caactcaatc agttcgattt caaatcgtgt caggtgcatt
     5941 cgcgacgcca tcaattcgcg ttgacgtgct tcggggacca gcagcctatc gcaatgcgtc
     6001 ccgtatgccg cctcgatcgc aagcattcca ttcaaccact gcgaatcacg gcccatttcc
     6061 tccagccaat cggccagttg cgctggttca atgccactcc gatgcaagaa tttccgctct
     6121 tcggcggcaa tcgcctcggc ggtgggctct tgtccagcgc agcgcgcagc gagacgccat
     6181 atgagcttga tgctcatgtc ctctagcgcc ccggacaaaa tcaactctgc taggaacaag
     6241 tcgcgcaact cctgaggtgc cgacgtatag cggatttgct cggaagaaaa gccttcatca
     6301 accgcaccga cgcaatattg acgggcaaag taatcgctaa agcggtcaaa tgtaagaccg
     6361 cgatttgcca gccatgcttc cgtctcctcc gccgtgatca gatcatggcg ataacgaaat
     6421 tcttctgccg cagcagaaat ggccgactcg tccaactcta attccaattc gtctgcacgc
     6481 tctttcgctg cgatgtgacg gagaaacgtc tgccattttt cctgaagtgt gccccggaaa
     6541 atagccgcat ctatagcatc gcgtgccgta tactgcgaag ttccgcacgc gcacacgatt
     6601 acatcgtaag gcgaaactga ctctctgctc gacatgaaga gcagcttttc taccgcattt
     6661 tagcaagaaa gtcgagcctc tcgctcacgc cgtcacgaaa gcgaccacgg aacagaaacc
     6721 gctggagcga ttgttgataa acaacgtgat cgcgacgtcc acgtgtaggg gcgagtttca
     6781 aagttagtaa actataaagt gttgcagtac cctgtcagtc cgttaagctc gatagcacgc
     6841 atggaggaac aaacgccgaa tatcaacgta gttcactccg tttggcgccg acttaagaag
     6901 gctaaaattc gtgacctgca gccgacgaag gacgtgaaag gtggtggcgg tgttaagggc
     6961 acgtccaaac ctaccacagg cggcaccggc actgcggaga acagaggtac ccgttagaaa
     7021 tttggcgtca gcagcggcgt gattgcactg gctttgccgg aatcaagcgg acggccactt
     7081 cacgaagaaa gcgaactaaa cctgcggtct caatcgtcga ggcaccggac gatgagacgg
     7141 ccgccagtgt gttgctggca gcgcacatct tgggcaacat ccgcacgcag acgatgcgcc
     7201 ctttcggcga ttccgaaatg aagaagatcg tagccaaggt ggcctgacag cgctactgcc
     7261 agagccgcag agatggataa cgcgaagtga ccggcaatgt ctcggagctg atccttcact
     7321 tcgagctgtc tatgatctgc tgcgcattat tgatcgcgga ctcgtccggc gctttgtctt
     7381 tcttcaggat gtcgatcgcc ttttgcgcgg aggcggtggc ttctttcttg ctgccaagct
     7441 tcgcctgaat ctgcgccttc ttgtagtgca tgaagtaggc gtctgggttc ttctccagcg
     7501 cctggtcgat ccacttcgcc gcctggttca tatccttgtt gttgtcgtag taaaaggctg
     7561 cggcctgata ggcggtgcgc gcatcgagtg gagtagttcc gccggcgacc gcctcgagtt
     7621 gcttgcttac ctgctcgaca tcatctgtgg tcaacttcac cgggacgcgc gttttatccc
     7681 aaaggaaatc aagcgttgcg gaagcacctt tcacatcatt cagcgcgatc gtgaacgtct
     7741 cgattgcgac cggaaagggt tccggcttcg ccgtgagacg cacggcatcg ttctcctgct
     7801 tataatcggc cgtgctctgc accttcgcgt ccttagacag gatgatggtc cactcgttcg
     7861 ctgtcggaat cgtgaagagt gcgtactcac cggccgggat ctccttgccg ccgagcgtta
     7921 ccgcgtcgct aaacttgatt ttggtgaccg cgttggcacc cgtgcgccaa aggttcccgt
     7981 aaggcaccag gccgccgaag atctcgcggt cgttcttgtt cgggcgcgaa taatccacct
     8041 cgacatcggt caacccgact cgctgtttta ccaccgagtg ctggctggcc gacgggaact
     8101 ctattttttt ctcgtccgcc gctcgaaggc tgccgggcag gagcggtccc gcgacgaagg
     8161 gaagtgcgaa caaagcggaa agaagaagcg aacgaag
//
LOCUS       DATDAJ010000019         8195 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_68585, whole genome shotgun sequence.
ACCESSION   DATDAJ010000019 DATDAJ010000000
VERSION     DATDAJ010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8195
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68585"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            238..2214
                     /locus_tag="VIS53_00385"
     CDS             238..2214
                     /locus_tag="VIS53_00385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEY5766268.1"
                     /translation="MRKELTVRGLIIGIIITLVFTAANVYFGLKAGLTFSTSIPAAVI
                     SMAILRGFRDATIQENNIVQTVASAAGTLSSIIFVLPGLIMIGWWTEFPFWISFWICA
                     LGGILGVMYSIPLRRALVTTSDLPYPEGVACAEVLKVGSSSDSKHASDIEHGRAGLLA
                     VLWGSIVAAVFAVVVQTQVLAADVAQTFRIGRRGSVSGYDFFLSFALLGIGHLVGLSV
                     GIAMLIGAFIGWGWLVPHFSAMSGDVTMAAATLAQKTWSTKVRFVGAGAIGVSAIWTL
                     LKLVKPVARGLTSAMAASRERKAGRADTLPITERDIPIGIVGLVTLICMLPIAWLLGY
                     FGNSSGLGAHLPTLVIGGVAYVVLMSFFVSAVCGYMAGLIGSSNSPLSGIGILVVIGA
                     ALLLVIGVKPYVGPDASKALMAFALFTTAVIFNVAAIANNNLQDLKTGQLVDATPWKQ
                     QVALIFGVIAGAFVIPPVLDLVNHAYGFVGAPGAETRAHPLPAPQAGLISSLAQGVIA
                     ADIDWSLIRIGGMIGVGIILLDEILARTTRNMRVPPLAVGLGIYLPTQSTLMIVVGAV
                     AGWLFDRRADRTARPESTKQLGVLLASGLIVGEGIIGVVISAIIVFSGKDAPLALVGP
                     GFETAGKILGGLGFAAIAIGLYRWILGLAPARAQ"
     gene            2211..2639
                     /locus_tag="VIS53_00390"
     CDS             2211..2639
                     /locus_tag="VIS53_00390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766269.1"
                     /translation="MKRKWNWPIWVGFVLIVAGLFSYGFFVRFPTTRDFPWANLLLFG
                     IGAALLIVGLFRGFGRPQVYRGKIAASIFAAIAVLLVAFFSYEIFYALRQVPASTGAP
                     RVGQKAPDFLLLDQNGKPVGLGDLLSNSKGAVLIFYRGFW"
     gene            2643..2996
                     /locus_tag="VIS53_00395"
     CDS             2643..2996
                     /locus_tag="VIS53_00395"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY5766270.1"
                     /translation="MCNSELRSFQQRLPEFEARGIRVVGISVDPPDINQRQSQKRGYI
                     FPLLSDPNAKVIRRYDVLHSGAGPKGADIARPAEFLLDSNGIVRWVNLTENIAVRARP
                     EQVLEALNQLGPAGE"
     gene            3034..3741
                     /locus_tag="VIS53_00400"
     CDS             3034..3741
                     /locus_tag="VIS53_00400"
                     /inference="COORDINATES: protein motif:HMM:NF014630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HEY5766271.1"
                     /translation="MHSELEQLLVLQDRQQKIRQIQTEIKTLPLERAYLEAQLAATAA
                     GVESLKHKGRQVEVERKKLELDVGTRAESISRLKMQQYQTRKNDEFQAISHEIERYEN
                     EIRKLEDQELELMIEVDKLKAELEAADKSARATKDSISRQLTELETKSKALETQQAEL
                     GNEREALASKIDADLLDQFERLFNSKGDAAIVAVEHGVCTGCHMKVTTATAARVKAGK
                     EIVSCEQCGRILYLGAL"
     gene            complement(3800..4924)
                     /gene="ychF"
                     /locus_tag="VIS53_00405"
     CDS             complement(3800..4924)
                     /gene="ychF"
                     /locus_tag="VIS53_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEY5766272.1"
                     /translation="MLSAGIVGLPNVGKSTLFNAVTRTHKAPAENYPFCTIDPNVGVV
                     IVPDPRLEKIAGISRSKKITPTAIEFVDIAGLVKGASAGEGLGNQFLHHIREVEAIVQ
                     VVRCFENPDVHHVSATIDPVRDIEVINTELVLADLASLQKRRDRMQKQLHAGEKAAII
                     ESAIIEKLLPHLDRGKPAITAELTPEEKAVARGFFLLTSKPTIFACNVAESDLAAISK
                     DDSANVATRYVDLVQDYARHHFATEAIVISAHIESELVDLSEQEALEYLRGLGVEDSG
                     VHALIRAVYHLLGLRTFFTTGEKETRAWTIHAGDKAPAAAGAIHSDFERGFIAAETIH
                     NNDLVAAGSFAKAREAGKLRLEGKEYEVRDGDVILFRFNV"
     gene            complement(5054..5317)
                     /locus_tag="VIS53_00410"
     CDS             complement(5054..5317)
                     /locus_tag="VIS53_00410"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEY5766273.1"
                     /translation="MKSQLNKGDRVRWHLLGMGNEIDLHTPHWHGKVLKINGTYTDVA
                     ELLPASMKSADMLADNPGQWMYHCHVADHITAGMTSMYRVHEK"
     gene            complement(5537..5610)
                     /locus_tag="VIS53_00415"
     tRNA            complement(5537..5610)
                     /locus_tag="VIS53_00415"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5574..5576),aa:Pro,seq:ggg)
     gene            complement(5696..6622)
                     /locus_tag="VIS53_00420"
     CDS             complement(5696..6622)
                     /locus_tag="VIS53_00420"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766274.1"
                     /translation="MTIFYDPRCLEYSISGHPERPARIARTAPVLKDRHPDWEWRKPT
                     AATDAPLLRAHSPGHIEGVASALEHFDLDTPLYPNIEAHARRSAGAAIEAMRSALRGD
                     AAFSLMRPPGHHATPDHAMGFCYFSNVAVAALDAFTVAGIADAGLPKSPPPAAKKIER
                     IGIWDFDGHHGNGTEAIIAHNERIRFASIHQFPAYPGTGAKSFANIDNYPIAPYAPRE
                     AILEVARRSLDKLIAFGPDLLLVSAGFDAYARDPLLQLTLEGEDFATFGEWLSQIDTP
                     IAVALEGGYSNELPELIDAFLSSWQGAADLHG"
     gene            6666..7433
                     /locus_tag="VIS53_00425"
     CDS             6666..7433
                     /locus_tag="VIS53_00425"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5766275.1"
                     /translation="MLNGQKIVVVMPAYNAARTLRQTYDEVMAHGIVDLVIVVDDASH
                     DETVAIARTLPSVQVDVHPENRGYGANQKTCYRLALAAGADIIIMIHPDYQYTPQLIP
                     AMAALVASGLYPCVLGSRILGGGALRGGMPWWKYVSNRFLTFAENFLIGAKLSEYHTG
                     YRAFSRQLLERLPLQTNSNDFVFDNQILAQIIALGCAIGEVTCPARYMPEASSINFRR
                     SVRYGLGCLATALRFRLARCGLAQPIVDDQSERKTPV"
     gene            complement(7835..>8195)
                     /locus_tag="VIS53_00430"
     CDS             complement(7835..>8195)
                     /locus_tag="VIS53_00430"
                     /inference="COORDINATES: protein motif:HMM:NF012434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEY5766276.1"
                     /translation="EDAKKLVNNGCYLVSEAANMPSVPAAVDLFLEKKILFGPGKAAN
                     AGGVATSGLEMSQNSMRLPWPREEVDSRLRHIMSTIFKNSWDTAEEYGQPGNLVVGAN
                     IAGFVKVADAMLDQGVV"
BASE COUNT         1702 a         2243 c         2343 g         1907 t
ORIGIN      
        1 aagcccggcc gttgcttcgc atccattacg ggatgtttga tttgaaggat aagacttgcg
       61 ggttgatccg cgttgtatct cagcagctcc cgctgcgctc gaccgctacc ctcgcggctt
      121 aaccggccat gtcgcggtac ccaacgctcc attctccgct gagtcaggaa ccagtcctgc
      181 ggtattgatt gcaatgcctt gaccccttcg gtgattgcac attattctcc gagtcctgtg
      241 cgcaaagaac tcacggtacg cggtctcatc atcggcatca ttatcacgct ggtgttcacc
      301 gcggcgaatg tgtacttcgg gctcaaagca gggctcacgt tctctacctc aatccccgca
      361 gccgtgattt cgatggccat cctgcgcggg ttccgtgacg ccacaattca ggagaacaac
      421 atcgtccaaa ccgttgcctc cgccgccggt acactttcgt cgatcatttt tgtgttgccg
      481 ggcctgatca tgatcggttg gtggaccgag tttccgttct ggatttcgtt ctggatttgt
      541 gcgctcggcg gaattctggg tgtgatgtat tcgattcctc tacgtcgagc gctagtcaca
      601 acttccgatt tgccgtatcc ggaaggcgtt gcatgcgctg aagtgctcaa ggtcgggagc
      661 agcagcgatt ccaagcatgc ttccgacatt gaacatggga gggccggtct gcttgcagta
      721 ctgtggggct cgatcgttgc tgcggtattc gcggtcgtcg ttcagacgca ggtattggcc
      781 gccgatgtgg cgcaaacttt tcggattggt cggcgcggat cagtgagcgg atatgatttc
      841 tttttgtcgt ttgctcttct ggggatcggc cacctggtcg gtttgtccgt cgggatcgcg
      901 atgctcatcg gcgcgttcat cggctggggc tggctggttc cgcatttctc ggcgatgtcc
      961 ggcgatgtca cgatggccgc cgcgacgctc gcgcaaaaaa cctggagcac aaaggtccgg
     1021 ttcgttggtg ctggcgcgat cggcgtttcg gcgatttgga cgcttctcaa actcgttaaa
     1081 ccggtggcca gagggctcac tagtgcgatg gctgcgtcgc gcgagcgaaa agccggccgg
     1141 gccgatacgc tcccgatcac tgagcgcgac attccgatcg gcattgtcgg actggtaacg
     1201 ctgatctgca tgctgccgat cgcctggttg ctcggatatt tcggcaacag cagcggtctg
     1261 ggcgcgcatt tgcccacact cgtcatcggc ggggtcgctt acgttgtgtt gatgagtttc
     1321 tttgtttctg cggtgtgcgg gtacatggcg gggttgatcg gttcctcgaa cagcccgttg
     1381 tctggcattg gcattttagt cgtgatcggt gcggcgttgt tgctcgtgat tggcgtgaaa
     1441 ccgtacgtcg gcccagatgc cagcaaggcg ctgatggcgt tcgcgctctt tacgaccgca
     1501 gtgatcttca acgttgcggc gattgccaat aacaacttgc aggacctcaa gaccggacag
     1561 ctggttgatg caacaccatg gaagcaacaa gtcgcgttga ttttcggtgt catcgcaggc
     1621 gcgttcgtca ttccgccggt gctcgatctc gtgaatcacg cttacggttt cgtcggagcg
     1681 ccgggcgctg aaacgcgtgc gcaccctttg cccgcgcccc aggcaggatt gatatcctcc
     1741 ctcgcgcaag gagtcatcgc tgctgatatc gactggagtt tgatccggat cggcggaatg
     1801 atcggcgttg gcatcatcct gctggacgag atcctcgcgc gcacgacacg aaacatgcgc
     1861 gttccaccgc tggcggtggg ccttggcatt tatctaccca cgcagagcac gttgatgatc
     1921 gtggtgggag ccgttgccgg gtggttgttc gataggcgcg ctgaccgcac cgcgcgaccg
     1981 gaatcaacga agcagcttgg cgtgctgctc gcatccgggt tgatcgtcgg cgagggcatt
     2041 atcggcgtgg tgatttcggc gatcatcgtg ttttcgggca aagacgcacc gctggcgttg
     2101 gtcgggcccg gcttcgaaac cgctggcaaa atccttggag gactaggttt cgcggcgatt
     2161 gcgattggcc tgtatcgctg gatcctcggc ttggcaccag cgagagcgca atgaaacgaa
     2221 aatggaactg gccaatctgg gtcgggttcg ttctcatagt cgccgggcta ttctcctacg
     2281 ggttcttcgt gcggtttcca acgacgcggg attttccctg ggcgaatctt ttgctttttg
     2341 gaattggggc tgcgttgttg atagtcggtc tgttccgcgg gttcggtcgg ccgcaggttt
     2401 accgcggaaa gattgccgca tcgatcttcg cggcgatcgc cgtgcttctt gtcgcgtttt
     2461 ttagctacga aatcttctat gccctgcggc aggttccggc ttcaactggc gccccgcgtg
     2521 tggggcaaaa ggcgcctgac tttctactac tggatcaaaa cggaaaacct gttggccttg
     2581 gcgatttgct ttccaactca aaaggcgccg tgctgatttt ctatcgtggt ttttggtgac
     2641 cactgtgcaa ctccgagttg cggagttttc agcaaaggct gccggagttc gaggcacgtg
     2701 gcattcgcgt tgtcggcatc agcgtcgatc cgccggatat taaccagcga caatcgcaaa
     2761 agcgtgggta catatttccg ctgttgtccg atccgaatgc gaaagttatt cgccgatacg
     2821 atgtcttgca ttccggggcc ggaccgaagg gagcggacat agcgcgaccg gctgaatttc
     2881 tccttgattc aaatggcatc gttcgctggg tgaatcttac cgagaatatt gccgtgcgtg
     2941 cgcggcccga gcaggtgctc gaagcattaa atcaactcgg ccctgcgggc gaatgattga
     3001 cgccgctttg ccgaatcaat aggttaagcg cccgtgcatt cggaactgga acaactgctc
     3061 gttctccaag atcgacaaca aaagatcaga cagatccaga ctgagattaa gacgctgccg
     3121 ttggaacgcg cttaccttga agcgcaactg gccgcaaccg cggccggcgt tgaatcgctg
     3181 aaacataaag ggcgtcaggt agaagttgag cgcaaaaaac tggaactcga cgtgggcaca
     3241 cgcgccgaaa gcatttcacg tctcaagatg cagcagtatc aaacccggaa gaatgatgaa
     3301 tttcaggcga tcagccacga aattgagcgg tacgaaaatg aaatccgcaa actcgaggat
     3361 caggaactcg aattgatgat cgaggtcgac aagctcaaag ccgaactcga agcggccgat
     3421 aaaagcgcgc gggcaacgaa agacagcatc tcacggcaac taacggaact ggaaacaaaa
     3481 tcaaaagcgc tggaaacgca gcaggcagaa ctgggaaatg agcgggaagc ccttgcgtct
     3541 aaaatcgatg ccgatttgct cgaccagttc gagcgcctgt tcaacagtaa aggcgacgct
     3601 gcgatcgtcg cagtggagca cggtgtttgc accggttgcc acatgaaagt aacgactgcc
     3661 actgcggcgc gcgtcaaagc gggaaaggaa atcgtcagct gcgagcaatg cggtcggatc
     3721 ttataccttg gcgcgttgta gccgcttcgc tgtgcgaagc gccaatctgc tgggccactg
     3781 acacagccgc ctctacaact cagacgttga atcggaacag aatcacgtcg ccatcgcgca
     3841 cttcgtactc ttttccttcc aagcggagtt tgcctgcttc gcgtgctttc gcgaaagaac
     3901 cggctgcgac cagatcgttg ttatgaatgg tttccgctgc gataaacccg cgctcaaaat
     3961 cggagtgaat cgctccagcg gcggcggggg ctttgtcgcc ggcatgaatc gtccaagcgc
     4021 gagtttcctt ttctccagtg gtaaaaaagg tgcgcaatcc gagtagatga tacacggcac
     4081 gaatgagcgc gtggacaccg ctgtcttcca cgccgagacc gcgtaaatat tcgagcgcct
     4141 cctgctcgct cagatcaacc agctcgctct cgatatgcgc gctaatcaca attgcttcag
     4201 tggcgaaatg atggcgggcg taatcttgaa caagatcgac atatcgcgtg gcgacgttcg
     4261 cagagtcgtc tttggaaatt gccgccaaat ccgattccgc cacgttgcag gcaaaaattg
     4321 ttggttttga cgtcagcagg aagaaacctc gcgcgactgc cttctcttct ggagtcaact
     4381 cggcggtaat cgccggcttc ccgcggtcca gatgggggag caatttttcg atgatcgcac
     4441 tttcgatgat tgctgccttt tcgccggcgt gcagttgctt ttgcattcgg tcgcgtcgct
     4501 tctgtaacga agccaggtca gcgagcacga gctcggtgtt tatgacctcg atgtcgcgca
     4561 ccgggtcaat ggttgcgctg acgtgatgaa cgtcgggatt ttcaaaacaa cgcaccacct
     4621 gcacgatcgc ctcgacttcg cgaatatggt ggaggaactg attaccgaga ccttcaccgg
     4681 cgctcgcgcc tttgactagt ccagcgatgt ccacaaactc gattgccgtt ggtgtgatct
     4741 tcttcgagcg agaaatcccg gcgatctttt ccagtcgcgg gtcgggcacg atcactacgc
     4801 cgacattcgg atcgatggtg cagaacggat aattttccgc cggcgctttg tgcgtgcgcg
     4861 tgacggcgtt gaaaagcgtc gatttcccga cgttcggcag cccgacgatt cccgcactta
     4921 gcatttagca atgtagcgtg agcgtctcgc ttgcgccggg gaaaatcgca agcagggacg
     4981 cttgcgctac cctgttttga ttctctcgag gccagcggga ttgatagatt atgtcgagcg
     5041 tctcagcaac gttctatttc tcgtgcacgc ggtacatcga cgtcataccg gcggtgatat
     5101 gatcggcgac atggcaatgg tacatccact ggcccggatt gtcagccagc atgtcggccg
     5161 atttcatgct tgccggcaga agttcggcaa catcggtata tgtgccgttg attttcagga
     5221 ctttgccgtg ccaatgaggc gtatgcagat caatttcgtt gcccatgccg agaaggtgcc
     5281 agcggacccg atcgcctttg ttcagttggc ttttcatgtt tgcgtgcccg tgatcgtcct
     5341 tgaagaacat ccctgcacgc cttcaaaggt tgcgtgatcg agaatcgggg ggatttactt
     5401 taatttgtag cggcaagtgc aactttccga aaatcgtctg cttttttgga cagcgaatct
     5461 tacgcaaaac agagaacttc cgcacggtaa gtttctctgc tgatcaaaag caagatcgtg
     5521 aagagatcta atcctctcgg gccggcggga ttcgaaccca cgacctcttg aaccccattc
     5581 aagcgttcta ccaagctgaa ctacggcccg atttgaagct ccgaatatgc gcaaactcag
     5641 gagattggcc acagatgaac acggattttc acaaacggag aaattcatct aagtttcatc
     5701 cgtgcaaatc cgcggcaccc tgccaactgc ttagaaacgc gtcgatcaat tccggcagtt
     5761 cgttgctgta cccgccttca agggcgactg cgatcggagt atcgatttgg cttaaccact
     5821 caccgaatgt cgcaaagtct tcaccctcga gcgttagttg caatagcggg tcacgtgcgt
     5881 atgcgtcgaa tcctgccgaa accagaagca aatcaggtcc gaaagcgatc aacttatcca
     5941 aagaacgccg cgcaacctcg agaattgcct cgcgcggtgc gtaaggcgcg atgggataat
     6001 tatcgatgtt cgcgaacgat ttcgctccag tgccaggata cgcgggaaac tgatgaatcg
     6061 atgcaaatcg aattcgctca ttgtgcgcta tgatcgcctc ggtgccgttc ccgtgatggc
     6121 catcaaaatc ccaaatgcca atccgttcga tcttttttgc agccgggggt ggtgacttcg
     6181 gcaggccggc atcagcgatg ccggctacag taaacgcgtc gagcgccgcg acggcaacat
     6241 tgctgaaata acagaaaccc attgcgtgat ctggcgtggc gtgatgtccc ggcgggcgca
     6301 tcaagctgaa agcggcgtcg cctcgcagcg cggaacgcat cgcctcgatt gctgcgccgg
     6361 ctgaacgccg cgcgtgtgct tcaatgtttg gataaagcgg ggtatcgaga tcgaaatgtt
     6421 cgagcgcgct ggcaacgcct tcgatatgcc caggcgaatg tgcacgcagt aacggcgcat
     6481 ccgtcgcggc agtgggtttc cgccattccc agtcagggtg tcgatctttt aggactggcg
     6541 cagtgcgcgc gatccgcgcc ggccgttctg gatggccgga gatcgaatat tccagacagc
     6601 gggggtcata aaaaatcgtc atcaagcttg caagctagct ttccaacgca tattcgacga
     6661 tcacgatgct gaacggccag aaaattgtag tggtgatgcc cgcgtataac gccgcgcgca
     6721 cgttgcgcca gacatacgac gaagttatgg cgcacggcat tgtcgatcta gtcattgttg
     6781 tggatgacgc cagccacgac gaaacggtgg caatcgcgcg cactctgccg agcgtgcaag
     6841 tggacgtgca tccagagaat cgcggttacg gcgctaacca aaaaacttgt taccgactcg
     6901 cgttggccgc aggcgcagac atcatcatca tgattcatcc cgattatcag tatacgcccc
     6961 agctgattcc agcgatggca gctcttgtcg cgagcggtct ttatccttgc gtgctcggtt
     7021 cgcggattct gggcggaggc gcgctccgcg gtggcatgcc ttggtggaaa tacgtttcaa
     7081 accggttcct cacgttcgca gagaattttc tcattggagc gaagctttcc gagtaccaca
     7141 ctggctatcg cgcattttcg cgccaactgt tggagcggct gccattgcaa acgaactcca
     7201 acgattttgt tttcgacaat cagatcctcg cgcaaatcat cgcccttggt tgtgccatcg
     7261 gcgaggtaac gtgcccagct cgttacatgc cggaagcgtc atcgatcaat ttccgcagaa
     7321 gcgtgcgcta cggactaggc tgtttggcga cggctctgcg gttccgtctt gcgcgctgcg
     7381 gcctggcgca gccgatcgtt gacgatcagt cggaacgtaa gacaccggtc taatatcctc
     7441 gtcgcacggc gtaatggccg gggatccaga ctcgctggcc gttacgcgat gcccaatgtc
     7501 ctggtttcca gccgtaatag gtgcggcctc ggtaataacc aggcccgtga acgtagtaag
     7561 gtcgatcgcc caccgccaca gtgacggaac ccggataacc cccgtaataa ggtctgttgt
     7621 aatagggacc gccaccatag ccaccataat agggtccgta gcccggggag gcggtgtagt
     7681 agcctccaca tcctactaag ccgagcgctg cggaacctag agcgaatagc agaaccgagc
     7741 atttcgtttg tattttcata tactggatat tcgaaatcga gagatgattt acgtgccccc
     7801 cgggatatac aggctaccag cttcaggggt cacgttagac cacgccctga tcgagcatgg
     7861 cgtcggctac ctttacaaaa ccagcgatgt tcgcgccgac cacgagattg ccgggctgtc
     7921 cgtactcttc cgcagtgtcc caggagtttt tgaagatcgt cgacatgatg tggcgcaacc
     7981 tcgaatcgac ctcctcccgt ggccatggta agcgcataga attttggctc atctcgagac
     8041 cagaggtagc aacgcctccc gcatttgcgg ctttgccggg gccaaacagg atttttttct
     8101 ccaggaatag atcgaccgct gccggcacgc tgggcatgtt ggccgcttca gagacaagat
     8161 aacaaccgtt attgaccagt ttcttggcgt cttcg
//
LOCUS       DATDAJ010000020         2776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_71861, whole genome shotgun sequence.
ACCESSION   DATDAJ010000020 DATDAJ010000000
VERSION     DATDAJ010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71861"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1111..2136)
                     /locus_tag="VIS53_00435"
     CDS             complement(1111..2136)
                     /locus_tag="VIS53_00435"
                     /inference="COORDINATES: protein motif:HMM:NF024039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY5766277.1"
                     /translation="MAKLHAPRPLISSSVTIGLLDAIAAAGADPDQVRQSIALDFTAL
                     SDAEGFIACVDFARLLEEVAQVTGDGCFGLHFGARSNPKNIGPLVYAVLNSPTIAAAC
                     ETAARYLHVHNQALKLSLHIDDHLAHFSYSYSHIALEQPRQFSEFTMANMLNTFRMMA
                     GSQWAPREIQFAHDAPVSNTEHLRVFGAPVIFRCASNALVMEREFLDRTVPSADHRLY
                     GIMTHYLGEVLNRMPTEDGVIAQIRKAIGESLKNGTPKLALVAKLIALSPRTLQRRLE
                     KYGLDFKKLVDDTRHQFALEYLSDRENTLTQIAFLLGYSEVSAFNRAFKRWTGFTPSD
                     SRRKYTS"
     gene            2228..2635
                     /locus_tag="VIS53_00440"
     CDS             2228..2635
                     /locus_tag="VIS53_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766278.1"
                     /translation="MNYLVDIFCRQNNGNYLDIVVRGLMDRQAFLRLMQAVGELTKPV
                     SDCKVLLDLQEITCDLGLEDLVELKAELSSFPWTAVGKLKLAMVTTPHPEQYHGLRQL
                     TLPVSQLGVDVAAFCESRRAIEWLAEETSCRGF"
BASE COUNT          639 a          709 c          774 g          654 t
ORIGIN      
        1 acgccgctgg taggaagtaa catattgatt ataatgggaa aatgttgcca tcaaaaggaa
       61 ctattaagtc ttacccccgg cttcgtcacg tcctcagtgt gcgattttgt ctatgcgatg
      121 atggtttgct caatccccgt cactttgttg cagtcaaagg ggggtaagat cggtaaaagt
      181 tgtgaaaccc ttctagaacc acttatgcag tgagaccgaa cgccgagcat acctccttta
      241 acgtccatac ggttgcttat tagttcgtcg ctcaatatcc cgttgctcgg ccatgagttc
      301 aggataggac gtatcgacca acagccgcgc aagctccaca ccgaacaacg cagccaggcc
      361 ttcgtcgtca agctcgaagg tgtgcagcgt gaagcgtagc ccacgacgcc ggggtcacgc
      421 cggatgtgag ctatatctat gacgcgctcg tgggcgaccc tcgcccagtt gtggtttggg
      481 gactcttgcc atttagctta gtcgacaacc cctggatcac cgaagcgatc gcttcgcaag
      541 cggagaacta ccagggcaag caacccaggg acgattgctc actgtcgggc cggaggcgtg
      601 gagcggcgct cacaatgcgg cgatgatttc cgcgggagta aaacacgcgg cggccaccga
      661 cggaagcttt tccgctatgt tgggttccga atcgccttgg gtgatcggag ctcccagcat
      721 tttcaatatt ggaacgtacc gcgacccgat ccaaagacac gggttcaaaa ccgcctaacc
      781 aaagcgcgct tccgtgtcag ggaaatcgtt agggtgagac tttgacaact cgactttctt
      841 cggagctttc tcaatcaggc ggaatccggg atcgaggtac ggtcgaactc gcgccgcccg
      901 ttaatttcgc tgcgcggcgc tttgcatagg cgctctatgc aagtcgtcca aagtgttcaa
      961 ggcgtggacc aaatcttggc cacgaacaag tgcgcaaatc gcagcaactt aaagcacctc
     1021 tagtggctgc tgcgtccttg atctcgaaag gcgcgctgga ttcgctaacc tgcgtttgct
     1081 cggttactgc ttgactgagg atggttgcgt tcagcttgtg tacttacggc gggagtccga
     1141 tggtgtgaag ccggtccaac gtttaaacgc ccggttaaac gcgctcactt ccgaatagcc
     1201 caacaggaaa gcaatttgtg tcagtgtgtt ttcacggtcg cttaaatatt ccagcgcgaa
     1261 ctgatggcgc gtatcgtcta ctaacttttt aaagtcgagg ccgtattttt ccagtcgtcg
     1321 ctgtaacgtg cgcgggctca gcgcaattaa ttttgccacg agagcgagtt ttggcgtgcc
     1381 gtttttcagt gattcgccga tcgccttgcg gatctgggca atgacgccat cctcagtcgg
     1441 cattctatta agcacctcgc cgagatagtg ggtcattatt ccgtataagc gatgatccgc
     1501 agacggaacc gttcgatcga gaaattcgcg ttccatgacc agcgcattgc tggcgcagcg
     1561 aaaaataacc ggagccccga aaactcgaag atgctccgtg ttcgacaccg gcgcatcgtg
     1621 ggcaaattga atttccctcg gcgcccattg actgcccgcc atcattctaa aagtgttcag
     1681 catgttcgcc atggtaaatt cactaaactg gcgcggctgt tccaaagcga tgtgggaata
     1741 agagtaagaa aaatgcgcga ggtgatcatc gatatgtaaa gacaatttta aagcttgatt
     1801 gtgcacatgg agataacgcg ccgcggtttc gcaggcggcc gcaatggtcg gtgagttgag
     1861 aaccgcataa acgagcggac cgatgttttt ggggttgctg cgcgcgccga aatggagccc
     1921 gaagcatccg tcgccggtca cttgcgcgac ttcttccagt aaacgagcaa aatccacaca
     1981 agcaataaac ccctcggcat cggacaaggc ggtgaagtcg agcgctatcg attggcgaac
     2041 ctgatcggga tcggcgcccg cggcggcgat ggcatcgagc aggccgatgg ttacgctgct
     2101 ggaaattaac ggtcggggcg catgaagttt agccacgatc tttgctttgc ctgatcgaga
     2161 cccagctgtc aatcgagtgt catggaaagt caagacaatc agccctctag gatttaaaaa
     2221 gctatgcatg aattatctgg tcgatatttt ttgccggcaa aataatggaa attatctaga
     2281 catcgtcgtc cgcggactta tggatcggca agcattcctg cggctcatgc aggcggttgg
     2341 cgaactcact aagcccgtca gcgattgcaa ggtattgctc gatcttcagg agattacctg
     2401 cgacctcgga ctcgaggatc ttgtcgaatt gaaggctgag ctaagcagct ttccgtggac
     2461 tgccgttggc aagctgaaac tcgccatggt gacaacgccg catccagagc aataccatgg
     2521 attgcgccaa ctaacgttgc cggtgtcgca attgggagtt gacgtcgcgg ctttctgcga
     2581 gtcacgccgg gcgatcgaat ggttggcgga agaaactagc tgtcgcggtt tctaacatta
     2641 agaaattgtt gcgcagggcg cgcagcgctt gattcctgcg gggtgtgttc gtaatgttgt
     2701 cagaatcgtg aaccgatccc gtcgaagtcg tattttaagg caaacgttgc cacggctggt
     2761 gttgtggttt gggttg
//
LOCUS       DATDAJ010000021         5853 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_73390, whole genome shotgun sequence.
ACCESSION   DATDAJ010000021 DATDAJ010000000
VERSION     DATDAJ010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5853
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73390"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VIS53_00445"
     CDS             complement(<1..569)
                     /locus_tag="VIS53_00445"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5766279.1"
                     /translation="MIYLPALGSIAIKGEEGRRILPAVRMLETGNYIVPQVGSNPYYR
                     KPPLVNWLVAASFKLFGTRNEWTARLPSALSVLAVAIAFVAVARSSLGPRGSIIAAMI
                     WLTNIGIIEKGRLIEIEAVYVSLCGLAIILWLSFFLQKKSPWLTWLPASVFLGLGLLA
                     KGPTHLIFFYGIVIAVLAYWKDWRVLVHPA"
     gene            791..2050
                     /gene="nusA"
                     /locus_tag="VIS53_00450"
     CDS             791..2050
                     /gene="nusA"
                     /locus_tag="VIS53_00450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEY5766280.1"
                     /translation="MFYMNAEFIAMLDYLERVRGIKREILLEAVSNALLSASKKSVGA
                     SRDLRIDINRKTGEIRALANLVVVDQVSNPQDEIEVSKARKIKPDANVGEILEVEVTP
                     KNFGRIAAQTAKQAMMQRIRQAEKEMIYEEFKDRAGEIVSGTVRRFDRSDVILDLGKF
                     EAVMPQRERVAVEDYNVGDRLRAYVVAVENGVRGPEIIVSRSHPNFVRRLFELEVSEI
                     ADGTVEIRGIAREAGYRTKIAVWSANEKVDPVGACVGMRGSRVKNIVRELNNEKVDII
                     RWSSDPKEYVLEALKPAKIKNLVFDTEKKNVQISVDEDQLSLAIGKKGQNARLTSRLT
                     GWEINIGKDTSATTVVEQKVAQAAQTLAGALPITEEQALSLVKSGFTNLEGLRDADVQ
                     DLVDILAVDEAKAREIYDAVHRQEVVH"
     gene            2106..4307
                     /gene="infB"
                     /locus_tag="VIS53_00455"
     CDS             2106..4307
                     /gene="infB"
                     /locus_tag="VIS53_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEY5766281.1"
                     /translation="MATKTSSKTATRKPAAGRKTTAPQKPADVAPKAKVPKKGPAAPA
                     EPTAPAKQLKSQPEKPDVSGHTTPHPETVSLIDRKRPAKKSLEGETKTKRTVLPPISR
                     IRASLEATSKPPPPAHVPAPEPPPPQPAEQPPAEAEAGPQQKVLLIKPPIVVKHFANE
                     LGLKPHQIIAELMTHNIFANINQTIEPDIAAKIAENHGFILEKERREKGGGVHKVEQQ
                     VVAPPPPVIEKKEELKPRAPIITFMGHVDHGKTSLLDAIRKTRVAAGEAGGITQHIGA
                     YSVDHNGHKITFIDTPGHAAFTSMRARGANVTDIVVLVVAADDGIMPQTVEAINHAKA
                     APHVKIMVAANKMDVPGANLDRLKKQLQERGLSPEDWGGETIVCPVSATKGTGIDHLL
                     EMMSLQAEVMELKASPTARPRGTVIEAQVEAGRGPTATVIVQMGTLKIGDPFICGDYS
                     GKVKSLLDDRGKPVKQAGPSTPVKVLGFIGLPNAGNEFLVMESERATKQLSDERLETK
                     RTNKLFVPQRATLETLLETAGGKKVLRLVLKADTQGSVEAIVNALKQIETKKVDLEMI
                     HSAVGPISESDILLASASEAVVVGFNVKVETMAVPVAKREGVQVKLYSIIYELLDQMK
                     DAMAGLLDPELRETVIGHAEVKQVFQLSRGIVAGCLVTDGRIARVARARILRKRQPVY
                     DGGISTLRRFQDDVKEVRSGLECGIKLGDFSEYQVGDVIECYQLEQIAQKL"
     gene            4355..4705
                     /gene="rbfA"
                     /locus_tag="VIS53_00460"
     CDS             4355..4705
                     /gene="rbfA"
                     /locus_tag="VIS53_00460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEY5766282.1"
                     /translation="MKHRQLRVNELVKRELSGIITREINFKGALVSINAVDVAPDLKS
                     AHVFVSILGAANGKGVIDKLEAHRPALQAELSRHVVLKYTPHLIFHLDESIKRGARVL
                     EILDDLGKRDGQDE"
     gene            4702..5691
                     /locus_tag="VIS53_00465"
     CDS             4702..5691
                     /locus_tag="VIS53_00465"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004527 - exonuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEY5766283.1"
                     /translation="MSNTTFEEIGRVLREHQQFVVLSHVRPDGDALGSQLALGLSLQK
                     LGKSVRIWNQEGMLEKYSFLPRAELLTKPPATAEHVDVAIALDTAIQNRLGTTLAAVG
                     SAKIWLNIDHHVSNPGYGDLVVIDQSAPATGEIIFRLIKSQGLPFDQDIAENLFAAIS
                     TDTGSFQYPKTSARTFEIAAGLVRDGDLDVGKISQQLYENYPRRRLELLRELLRTMRF
                     SECGRIAKFGLSLKNAAELGVIPEDNEGLIDHLRAVHGVIVAVFFEELSDGKVRVSMR
                     SKDERVDVCAICQKFGGGGHTLAAGARVRGTLAEVEEKVLEETREAVKRACIS"
     gene            5723..>5853
                     /locus_tag="VIS53_00470"
     CDS             5723..>5853
                     /locus_tag="VIS53_00470"
                     /inference="COORDINATES: protein motif:HMM:NF013660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase"
                     /protein_id="HEY5766284.1"
                     /translation="MTSHDVVALARRQLGTKKIGQCGTLDPIATGLLLLTVGRGTKV"
BASE COUNT         1482 a         1576 c         1670 g         1125 t
ORIGIN      
        1 gcaggatgaa caagaacccg ccaatctttc caatacgcca gaacggcgat gacaatgccg
       61 taaaaaaata tcagatgcgt cggccctttt gccagcagac caagcccgag aaaaaccgat
      121 gcgggaagcc acgtgagcca cggcgacttc ttttgaagga agaagctcag ccaaagaata
      181 atcgccaggc cgcaaagcga tacgtacacc gcctcgattt caattaaccg gcctttctcg
      241 atgatgccga tattcgtcag ccagatcata gccgcgatga tcgatcctct cgggccgagg
      301 ctggaacgcg cgacagcgac aaacgctatg gctacggcaa gcaccgaaag ggccgagggc
      361 agccgcgctg tccattcgtt tcgcgtgcca aacaatttga aagatgccgc taccagccag
      421 ttcaccaggg gtggcttgcg gtaatatggg ttactgccca cttgcggtac gatgtagttc
      481 cccgtctcaa gcatccgaac agccggcaaa atccgacgtc cctcttctcc cttaatggcg
      541 atcgaaccga gcgcgggcaa atagatcacg gcccacacaa gaataacgac agcgatggct
      601 cgaagccgcg aattgactag atctttaatg ctcaattgtt gctcgcgatt tatgcgaacc
      661 tgaaccccgg acgtcaaatc aaaccgatcc gcagcttgac gcgaacgctt cgcaaacgta
      721 acctgtagcc ctagtccgcg cgctgatgga gtgggaactg gtgtcccact ctttttagtc
      781 tgcgggctgc atgttttata tgaacgccga atttatcgcc atgctcgatt acctggagcg
      841 ggtacgcggg atcaagcgcg aaatcctgct cgaggcggtg tccaatgccc tgctctctgc
      901 ctcgaaaaag agcgttgggg cctcccgcga tttgcgtatt gatatcaacc gcaagaccgg
      961 cgaaatccgt gcgctcgcaa atttggtcgt tgtcgatcag gtatccaatc cgcaggatga
     1021 aatcgaggtc tcaaaggccc gtaagatcaa accggacgcg aatgtcggtg agattctgga
     1081 ggtcgaagtc acaccgaaaa atttcggacg catcgcggcg caaaccgcaa agcaagcaat
     1141 gatgcagcgg attcggcagg ctgagaagga gatgatttac gaggagttta aggaccgcgc
     1201 gggggaaatt gtcagtggca cagtccgacg gttcgaccgt tccgatgtca tcctcgacct
     1261 tgggaaattt gaagctgtca tgccgcagcg cgaacgagtc gcggtggaag attacaatgt
     1321 cggcgatcgt cttcgcgcgt acgtcgtggc tgtagaaaac ggtgtacgtg gccctgagat
     1381 aattgtctcc cgcagccatc cgaatttcgt acggcgactg tttgagttgg aggtaagcga
     1441 gattgccgac gggacggtcg agattcgcgg tattgcgcgc gaagccggtt atcgcaccaa
     1501 gatcgcggtg tggagcgcga atgaaaaagt cgatccagtc ggtgcgtgcg tgggcatgcg
     1561 gggctctcgc gtgaaaaaca ttgtgcgcga gctcaacaac gaaaaggtgg atatcattcg
     1621 ctggagctca gatccaaagg aatacgtttt ggaagcgctc aagcccgcga aaataaaaaa
     1681 tcttgttttc gatacagaga aaaagaacgt gcaaatctcg gtggatgagg accagctttc
     1741 gctcgccatc gggaaaaaag gacaaaacgc gcggctgact tcgcgactca ccggctggga
     1801 aatcaacatc ggtaaggaca cgtcggcgac gacggtcgtg gaacaaaagg tggctcaagc
     1861 cgcacaaacg ctggccggcg cgcttcccat caccgaagaa caggcgctta gtctggtgaa
     1921 atccggcttt actaatctcg aaggattgcg cgatgcagat gtgcaggatt tggtggatat
     1981 tctcgcggtc gacgaagcaa aggcgcgcga aatctacgat gcagtgcacc ggcaggaagt
     2041 cgtacactaa catggctccg gtttgaggag gcttgagcca tgagcgacat tttaaaagaa
     2101 caacaatggc aacgaagacg agcagcaaaa ctgcaacgcg taagcccgcg gcgggacgca
     2161 agactactgc tcctcagaag ccggcggacg tagcaccaaa agccaaggtg ccaaaaaagg
     2221 ggccagcggc cccggcggag ccgaccgcgc ccgcgaagca gctcaagagc cagccggaaa
     2281 aacccgacgt ttccggacac accaccccgc atccggagac tgtctcgctg atcgatcgaa
     2341 aacggccggc aaaaaaatct ctagagggcg agacaaaaac aaagcgcacc gttctgccgc
     2401 cgatctcgcg tatccgcgcg tcgcttgagg ctacttccaa gccaccgccg cccgcgcacg
     2461 tgccggcacc ggaaccgccg ccacctcagc cggccgagca accgcctgct gaagcggaag
     2521 ccggaccgca gcagaaggtt cttctcatca agcctccaat tgttgttaaa cattttgcaa
     2581 acgagctcgg actaaaaccg catcagataa tcgcggagct gatgacgcat aatattttcg
     2641 ccaacatcaa tcagacaatc gagccggata tagctgcgaa gattgcggaa aaccacgggt
     2701 tcattctgga aaaagagcgg cgggaaaaag gcggcggtgt tcacaaggtg gaacagcagg
     2761 tggtcgcgcc gcctcctccg gtcattgaga agaaagagga acttaagcct cgcgcgccaa
     2821 ttatcacttt catggggcac gtcgaccacg ggaagaccag tttgttagac gcgattagaa
     2881 agacgcgcgt cgcggctggc gaagccggtg ggattacgca gcacatcggc gcgtacagcg
     2941 tcgatcataa cggccacaag attacgttta tcgatacacc ggggcacgcc gcattcacct
     3001 ctatgcgagc gcgcggcgcg aatgtcaccg atatcgttgt gctggtggtt gcggccgacg
     3061 acggcatcat gccgcaaacc gtcgaagcga taaatcacgc caaggccgcg ccgcatgtga
     3121 aaatcatggt ggctgccaat aagatggatg tcccaggcgc gaacctcgat cgccttaaga
     3181 aacaactgca agagcgcggt cttagtccgg aagattgggg aggagaaacg attgtttgcc
     3241 ccgtctcggc aaccaagggc actggaatcg atcacctgct tgagatgatg tcgcttcaag
     3301 cagaggtaat ggaactgaaa gcgtcgccta ccgccagacc gcgcggcacc gtcatcgaag
     3361 cacaagtgga agccggccga gggcctaccg ccaccgtaat cgtgcagatg ggcacgttga
     3421 aaatcggcga tccttttatc tgcggcgact acagcggaaa agtaaaatcg ctcctcgacg
     3481 accgaggcaa acccgtcaag caagccggcc cttcgacccc cgtgaaggtt ctcgggttca
     3541 tcgggctgcc gaatgcgggc aacgaatttc tcgtcatgga atcggagcgc gccaccaagc
     3601 aactgagcga cgagcgactt gaaacaaagc gcaccaacaa gctttttgtg ccgcaacgtg
     3661 ccactctcga gacgctgctt gaaaccgccg gaggcaaaaa agtgctgcgg ctcgttttga
     3721 aagccgacac gcaaggttcc gtcgaagcaa tcgtcaacgc gttgaaacag atcgaaacca
     3781 aaaaagtcga tctggaaatg attcactcag cagtcggacc gatttcggaa tccgacattt
     3841 tgctcgccag cgcatccgaa gcagtagtcg tcggttttaa cgtgaaagtt gagaccatgg
     3901 cggtcccggt tgcaaaacgc gaaggcgtgc aagtcaagct ttacagcatt atttatgagc
     3961 tgctcgatca aatgaaagac gccatggccg gtctgctgga tccggagttg cgcgaaaccg
     4021 tcattggaca cgcggaagtc aaacaggttt tccagttgag tagaggcatt gtcgctggtt
     4081 gcctcgtgac cgatggtcgg attgctcgtg tggcacgcgc tcgcattctt cgaaagcgtc
     4141 aaccggttta cgatggcggg atttcgacac tgcgccgatt ccaggatgac gtaaaagaag
     4201 tccgttccgg tctggaatgc ggaatcaagc tgggcgactt cagcgaatat caggtgggtg
     4261 acgtgatcga gtgctatcag ctcgagcaaa tcgctcagaa actataagca atccgccgcg
     4321 gcggacgccg gcgtttccca gaaacgcctt acatatgaaa catcggcaac tacgcgtaaa
     4381 cgaattggtg aaacgcgagc taagcggcat cattacgcgc gaaattaatt tcaaaggggc
     4441 attggtcagc atcaatgctg tcgatgtcgc ccccgatctt aagagcgcgc acgttttcgt
     4501 gagcatcctc ggcgccgcta atggcaaagg tgtaatcgac aagctggagg cgcatcggcc
     4561 ggcgttgcag gcggaactgt cccggcacgt cgtgctaaaa tacacgccgc atctcatttt
     4621 ccatctcgac gagtccataa aacgcggtgc acgcgtgctt gagattttgg acgacctcgg
     4681 caaacgcgac ggccaagacg agtgagtaac acgacgtttg aagaaatcgg ccgcgtcctt
     4741 cgcgaacatc agcagttcgt tgtgctcagt catgttcgtc ccgatggcga tgcgcttggc
     4801 agtcagctcg cgcttggcct ctcactccag aaacttggta aaagcgtacg catttggaac
     4861 caggaaggga tgctcgagaa atattcgttc cttccgcgcg ctgaattgct cacgaaacca
     4921 cccgcaacag ccgagcacgt ggatgttgcc attgcgctcg acaccgcaat tcaaaaccgg
     4981 ttgggcacga cgctggccgc cgtgggatcg gcgaaaatct ggctcaacat cgaccatcac
     5041 gtcagtaatc caggttatgg agacttggtc gtgattgatc aaagcgcgcc cgcaacggga
     5101 gaaatcattt tcagattgat caagagccag ggcctgcctt tcgaccagga tattgcggaa
     5161 aatctcttcg cggcgatctc aaccgataca ggctcgtttc aatatccaaa aaccagcgcg
     5221 cgcacgtttg aaattgctgc cgggttggtg cgcgatggcg atctcgacgt tggaaaaatc
     5281 agccagcaac tgtacgagaa ctatcctcga cgccgactcg aactcttgcg cgagctgttg
     5341 cgaacgatgc ggtttagtga atgcggccga atcgcaaagt ttggcctaag tttaaagaat
     5401 gcggcagaac ttggtgtaat tcccgaagat aacgaaggat taatcgatca cctccgcgcg
     5461 gttcacggcg ttatcgtcgc tgtgtttttc gaagagcttt ccgacggaaa ggtgcgcgtc
     5521 agcatgcgtt ccaaagacga acgggtggat gtatgcgcga tttgccagaa atttggcggc
     5581 ggcggtcaca cactcgctgc cggggcgcgc gtgcgcggaa cgttagcgga agtggaagaa
     5641 aaagttctgg aggaaactcg tgaagccgtt aagcgcgcct gcatctcctg acggcgttct
     5701 gctagtggat aaagccgaag ggatgacgtc gcacgacgtt gtcgcgctgg cgcgacgaca
     5761 acttggaacg aaaaagattg gccagtgcgg cacgctcgat ccgatcgcca cgggtctgct
     5821 gctgctcact gtgggccgcg gcacaaaggt tca
//
LOCUS       DATDAJ010000022         2629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_79517, whole genome shotgun sequence.
ACCESSION   DATDAJ010000022 DATDAJ010000000
VERSION     DATDAJ010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79517"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1206
                     /locus_tag="VIS53_00475"
     CDS             175..1206
                     /locus_tag="VIS53_00475"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5766285.1"
                     /translation="MNTRVWLGAGALLVGGWITARLIRTAQYTLGDKVALISGGSRGL
                     GLVLARHICNQGGKVALLARDPEELARAKADLTARGGKVLTVECDLLDRDQIQAAVRK
                     VIDHFDRIDVLINNAGIIEVGPLDHMTREDYDRAMRLHFWAPYELISQILPEMRLWGG
                     GRIVNITSIGGKVAMPHFAPYSASKFALTGYSDAMRAELARDNIQVTTVAPGLMRTGS
                     HVNAKFKGNHDAEFAWFSAGAGAPLISMDADRAARKIVAAFRRGQPSLTLTFVARGAI
                     AGNALFPNFTGYAMKIVNRFLPDVSDESGEQSRPGSELPRLTPEWMTRLADRATKENN
                     EDATSSVNR"
     gene            1274..1819
                     /gene="thpR"
                     /locus_tag="VIS53_00480"
     CDS             1274..1819
                     /gene="thpR"
                     /locus_tag="VIS53_00480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEY5766286.1"
                     /translation="MSKRLFVAIDLPDSTRQLLADIDPDIRGVRWTEPDQMHLTLGFY
                     GGVPEDVELKLREKLSAVEFDAFFLNVNGVGVFSSKGAPKIIWIGIGKAHPHLFQIHK
                     RAQEAALAVGIEPELRPWHPHITIARCRDVSAQALRKFIQSNAEFDAGMIRVDAFHLY
                     SSNLTLAGPIHTRELTVHCRE"
     gene            complement(1907..>2629)
                     /locus_tag="VIS53_00485"
     CDS             complement(1907..>2629)
                     /locus_tag="VIS53_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5766287.1"
                     /translation="SAGRRYSELFPTRIRTRTHTPWREIWNAIVHEHRRRSFLAFVLM
                     STQAFFYNAIFFTYALVLMRFYGVPEKDVGGYLLPFALGNVLGPLLLGHLFDTIGRKQ
                     MITLTYALAGVLLAVTGWLFHAGLLTAQTQTLAWTIIFFVASAAASSAYLTVSEIFPL
                     EIRGMAIAIFFAVGTLVGGVGAPLLFGWIIGTGSSTALFIGYLVAAALMIFAAAVEAW
                     IGVAAERRSLEHIAVPLSSKGL"
BASE COUNT          597 a          745 c          738 g          549 t
ORIGIN      
        1 gctcatgata agcgcgctga tttgaagaaa cgcgctgttg atcgcgagac ggcacgtgaa
       61 gttgcgcgct tcaatcgcaa acacgcgtaa ctgtccaaca aatgacgcgc ggtcgccttg
      121 tctttcacgg ccgtttgctc caaagctttc gtatatgatt atggggttgt gcaaatgaat
      181 acgcgggttt ggctcggagc aggcgctctt ttagtcggcg gttggatcac cgctcgcctc
      241 atccgcacgg cgcaatacac gttgggcgat aaagttgccc tgatcagcgg cggatcgcgt
      301 ggacttggtc tcgtgctggc gcgacacatt tgcaaccaag gcggaaaggt tgctctcctc
      361 gcgcgtgatc cagaagaact tgcgcgcgcg aaagccgatc tcactgcgcg cggtggaaaa
      421 gttctcaccg tcgaatgcga tctgctcgat cgcgatcaga ttcaggctgc tgtccggaaa
      481 gtcatcgatc atttcgaccg gattgacgtt ctgatcaaca acgccggcat catcgaggtc
      541 ggtccgctcg atcacatgac ccgcgaagat tatgaccgcg cgatgagact gcatttttgg
      601 gcgccgtacg aattgatttc acagatcctg ccagagatgc gtctttgggg tgggggacgg
      661 atcgtgaaca tcacctccat cggtggaaaa gttgcgatgc cgcattttgc gccatatagc
      721 gcgagcaagt ttgcgctgac cggttactct gacgcgatgc gggctgagtt ggcgcgcgac
      781 aacattcagg tcacaactgt agcgcctgga ctcatgcgga ccggctcaca cgtgaacgca
      841 aagttcaaag ggaaccacga cgctgaattt gcctggtttt ccgccggcgc gggcgcgcct
      901 ttgatctcaa tggatgcgga tcgcgcagcg cggaaaatcg ttgcagcatt cagacgtggt
      961 cagccatcgc ttacccttac gtttgttgcc cgcggcgcga tcgccgggaa cgcgctgttt
     1021 ccaaatttca ccggatacgc catgaaaatt gtgaatcggt ttctccccga cgtatccgac
     1081 gaaagcggcg agcagtcgcg acctggttct gagctcccac ggctaacgcc ggaatggatg
     1141 acacgtttgg ccgaccgcgc gacgaaggag aacaatgaag acgcgacgtc gtccgtgaat
     1201 cgttaaacgt tacatcggat ttgattgttg cccattcaac gattcgccat tcaacgatta
     1261 acagggcgaa gccatgagca aacggctctt cgtcgcgatc gatctaccgg actcaacgcg
     1321 ccaattgctt gcagatattg atccggacat tcgcggcgtc cgttggactg aaccggatca
     1381 gatgcacctg acgctcggtt tttacggagg cgtaccggaa gatgttgaac tcaagcttcg
     1441 ggaaaaactg agcgcggtcg agttcgacgc gttctttcta aacgtgaatg gcgtcggtgt
     1501 cttctcctcg aaaggcgcgc cgaaaattat ctggattggc attggcaagg cgcacccgca
     1561 tctgttccaa attcacaagc gcgcgcagga ggccgcgctg gctgtcggta tcgaaccgga
     1621 gcttcgtccg tggcatccgc atatcacgat cgcccgttgc cgcgatgtct ccgctcaagc
     1681 gctacggaaa ttcatacaat cgaatgccga gttcgatgct ggaatgatcc gcgttgacgc
     1741 gttccatctt tattccagca acctgacgct tgccgggcca attcatactc gcgagttaac
     1801 ggtccactgc cgcgaatagc actgtagctg cttcgctgtg cgaaacacga cgctaatgta
     1861 tttgcgccac aaatccccgc gcgtctcata gagacgcggc tacagattac agccctttgc
     1921 tcgacaacgg cacggcgatg tgctcgagcg agcgtcgctc ggcggccacg ccaatccatg
     1981 cttccaccgc cgccgcaaaa atcatcaacg ccgcagcgac tagataccct atgaataatg
     2041 ctgtgctcga acccgtgccg ataatccaac cgaacagcag cggcgcgccg acgccgccga
     2101 ccagcgttcc gactgcgaag aagattgcga tcgccattcc gcgaatttcc aagggaaaaa
     2161 tctcgctcac ggtcaggtag gcagaactgg cggctgccga agcgacgaaa aagataattg
     2221 tccacgcaag tgtttgcgtt tgcgcggtca gcaatccggc gtgaaaaagc cagccagtca
     2281 ccgcgagcaa tactcctgcg agcgcatacg ttagggtaat catttgcttg cgcccgatcg
     2341 tgtcgaacag atgtccaagc agcagcggcc cgaggacatt tccaagcgcg aacggcagaa
     2401 gataaccacc gacgtctttc tccggcacgc cgtagaaccg catcaacaca agcgcatacg
     2461 tgaaaaagat tgcgttatag aaaaatgcct gcgttgacat gagcacgaaa gcaagaaacg
     2521 aacgtcgccg atgttcgtgc acaatcgcgt tccagatctc gcgccagggc gtatgcgtgc
     2581 gggtgcgaat gcgcgtcggg aacagctcgc tgtagcggcg tcctgcgga
//
LOCUS       DATDAJ010000023         7983 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_81033, whole genome shotgun sequence.
ACCESSION   DATDAJ010000023 DATDAJ010000000
VERSION     DATDAJ010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7983
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81033"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1327
                     /locus_tag="VIS53_00490"
     CDS             <1..1327
                     /locus_tag="VIS53_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5766288.1"
                     /translation="INNPNAINPIFLLAERERIAVPEKMAGGTLALPGEKEEMRVPHV
                     LKDGADSIGVAGATIRVYVNIGMFSEYWLTRHNRLIGLTPQKPFEIAYAREHSVFWRA
                     TEERLANIAAFFRRLQPFHLTDAPGGQAYITADAAMMTRGKEVFAESCAACHSSKQPA
                     ANLDPHSGEGKAWFRAAVMAPDFLENNFLSNDRRYPLTKIETNSARAFGTNAKPGHVW
                     DNFSSLTYKELSPVDELEFFNPFGETHPIKFKPKEKNVAPGYYRVPSLVSVWSSAPLL
                     HNNTLGKFTGDPSIAGRIDAFNDAIEKLLWPEKRLNKDSIWRTQNECTLHLRKEFVPK
                     PLQRLAGTDGYIRIGPIPKGMPINLIGNLEPDLGQLVVLQAKIAKALVKIHTMNLSPE
                     EATAELAKAVPELVAANKCPDFVEDKGHYFGTDLPDSDKRALIEYLKTF"
     gene            1350..1793
                     /locus_tag="VIS53_00495"
     CDS             1350..1793
                     /locus_tag="VIS53_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766289.1"
                     /translation="MAVTVPEMLKMSQAQLDDLFTQSPVGEIPSGEAKGTAIVGPGTT
                     YTQDIANFINHFAWQGKVFDPSKGVLRNKILPFGLNAIIAKVYKGSSWMDQKECIVLD
                     YSETSLLAHWVRDEIREVAPRTYLGKVYLGKKRLIDFALEFPAAT"
     gene            1821..3056
                     /locus_tag="VIS53_00500"
     CDS             1821..3056
                     /locus_tag="VIS53_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766290.1"
                     /translation="MNSNVSRPMPRANTGSRFLNWLSDTTMFLLQMERRIDPWLRPIF
                     DATLRDPVARIVTALMNKKRKNEGLKIAEEKLLPNEEEFLNSVIESFTTQMRGLWKPG
                     GFERGGNTKTQGIVRGEFIVHDNLPPQFRYGIYARPQTFRCWVRFSGPGPYITPDIDD
                     VGFMSISIKLLGVPGPKLMDEEKFTLDMFGVSTPTFVTQDIKSNAHLQKWSVKNAQIF
                     HFVNFEEPHIADMIMQGLWVKTQSSPFEAPYFSCVPYLLGEGQAMQYSVWPKTNKKTP
                     IPRLPLRPPDDYLRNAMIKALSEGDVELDFRLQLQTDPFLMPIENNGVLWPEKLSPRV
                     SVATLRLPKQKFDSPAQMEFARKLSYNPWHTIAEHRPLGNQSRARRRMYFELSQLRHN
                     MNKVPHYEPTGDEVFEQAP"
     gene            3053..4354
                     /locus_tag="VIS53_00505"
     CDS             3053..4354
                     /locus_tag="VIS53_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766291.1"
                     /translation="MTPQSNFMVLAPIIPERETELRQLLDSMNRGSGQVDPNNALLPF
                     ADFEMLHFARFIILDDKTTEDVRVYGLKPRTYPLYLAFLGDVDGDANAFLGKLIKRAG
                     KGLGKIFSCCQGFAADTDLFDWMKQHDAPAIAVYVNWRGRTVRQIREEAAVYDALENY
                     IEKHAASLHGLAPREAHEKLRAFVSAEQSAGRLTLSKEGRTPIGWQIKNLLHMIGFPL
                     LGLLLSPLLLVAAPFYIFALRRLEKSDPVVCPTVDQKHSENLSSFEDHDVTNQFSAMG
                     SLKPGLVRLLTASVVLKTVNYGARHITRPSRLGRIRSIHFARWVFVAGRERMIFCSNY
                     DGSVESYMDDFINKTGFGLNASFSNGIGYPRTNWLVRDGCIDERNYKEYLRRHTLPSQ
                     VWYKAYPGLSAVDLEKNTRIRQGLEMSSISDEQAREWVTLL"
     gene            4351..5832
                     /locus_tag="VIS53_00510"
     CDS             4351..5832
                     /locus_tag="VIS53_00510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766292.1"
                     /translation="MSEVDYADVQGLVRFGYGHMTSASYALVRVKNADAAKAWLRSAP
                     VTTAVAQKPPPETAMNIAFTAPGLRTLGVPQSIIAGFSHEFRGGMGQESRARQLGDVG
                     KNAPSNWTWGSDGREPHALVMFFAEQGHLDSFMQRAGDQNWSEAFEEITSLGTSNLDG
                     DEPFGFADGISQPQIDWEQQLERPCTQLGYTNISALGEFLLGYRNEYGKITDRSLVES
                     DAAAAELLNAEDALAKKDLARNGTYLVMRQLEQDVRGFWKFLYEQADGSVADANQLGA
                     KMVGRTRAGDPLVPIQAEPIPGTDPRTVAQNQFTYESDPVGARCPFGAHVRRTNPRSS
                     DFPERRPNALRKLMIMLGFGPKGFYDDLTSSVRFHRILRRGREYGSELLPEEALQAPP
                     PNESPRGLHFICLNANISRQFEFLQNAWITNTKFSGITGESDPLLGTRESIPGCPVTG
                     NFTIPGEGTLRRRVSGLPQFVTVRGGAYFFLPSLRALRYFAGA"
     gene            5878..6918
                     /gene="sppA"
                     /locus_tag="VIS53_00515"
     CDS             5878..6918
                     /gene="sppA"
                     /locus_tag="VIS53_00515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEY5766293.1"
                     /translation="MRTAVLRKFRSGMASDRRLGCLSIFLFIALCASLFVNFVLMIAA
                     FQRVGGIRDAEPIPRFREILLQKGARATTDKIAVITMRGLISSSIPGNVSDSMVDDLR
                     TALQQAREDHRVKAIVLEIDSPGGEVTASDAIYSAVVKTRARKPVVVYMDSLAASGGY
                     YISCGGKFLMANETTITGSIGVIIQTLNYEQLLNKVGLASVVFKSGKFKDMLNGARPI
                     TPEERELVQNFIMSTYDKFLGIVAKERNLPADLLRNTVADGRILSGKDALQNKLIDGL
                     GELDDAFAKAKQLGNAPDAKVVKYGPPFSLSRFLRVFGESDSKIELQLPKQLVPQLES
                     GRAYFLPSYYAP"
     gene            6953..7792
                     /locus_tag="VIS53_00520"
     CDS             6953..7792
                     /locus_tag="VIS53_00520"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II CAAX endopeptidase family protein"
                     /protein_id="HEY5766294.1"
                     /translation="MLFGNILAASGAAPSLALSLLSALYFIASLCVYVSLIYQISARI
                     RIVSGADAPARAFGLPEAVLASVLIFFFLLTLGSTVPDPALQFHPRNLLANFLVSAFV
                     VLVIATLLQFRGFDVGALAGFFRINFFRTLGTGAILLFFAYPLIGFSETINQRFFGGG
                     SSKQSIVEFFSASRTIEERILIIVFAVAIAPIVEEFVFRFFIYGVFKRYVGCLLGVIL
                     SSLLFAVAHAHFPSFVPLFVLGSCFAIAYEWSGSILVSMTMHSLFNSLTLIALAFPEI
                     LSQ"
     gene            7789..>7983
                     /locus_tag="VIS53_00525"
     CDS             7789..>7983
                     /locus_tag="VIS53_00525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766295.1"
                     /translation="MKLGALGEDRLLNQILLHLPRRRGGKVFAGSADDCAIVKIQQSK
                     KYLVLKTDCVVEGVHFVRGTK"
BASE COUNT         1852 a         2105 c         2183 g         1843 t
ORIGIN      
        1 cattaacaat ccaaatgcga tcaaccccat ttttttgctt gctgagcggg agcgcatcgc
       61 ggtgccggag aaaatggctg gcggaacact cgcgttacca ggggaaaaag aggaaatgcg
      121 tgtgccgcac gtgctaaaag acggcgcaga ttcaatcggc gtggccggtg cgacgatccg
      181 tgtttacgtc aacatcggca tgttttctga gtattggctg acacggcaca accggctgat
      241 cggactcacg ccgcaaaaac cgttcgaaat tgcttatgcg cgcgagcatt ccgttttctg
      301 gcgtgcgacc gaagagcgtc tggcaaatat cgccgccttt tttcggcgcc ttcaaccgtt
      361 tcatctcacc gatgcgcctg gtggacaggc ttacatcacc gcggatgccg cgatgatgac
      421 acgcggaaaa gaagtttttg ccgaaagctg cgcggcctgt cattccagca aacagccggc
      481 agcaaacctc gatccccact ccggcgaagg aaaagcatgg ttccgcgctg cggtgatggc
      541 gcccgatttt ctcgaaaaca attttctttc gaacgacagg cgttatccat tgacgaaaat
      601 cgaaacgaat tcggcgcgcg cgttcggaac taacgcgaag cctggtcacg tctgggacaa
      661 tttctcttcg ctcacgtaca aagagctttc gccagtcgac gagcttgaat ttttcaaccc
      721 gtttggtgag acgcatccga tcaaattcaa acctaaagaa aaaaatgtgg cacccggcta
      781 ttaccgcgtg ccgtcgctgg tcagtgtgtg gagttccgcg ccgctattgc ataataacac
      841 gctgggaaaa tttactggcg atccttcgat agcgggtcga atcgacgcat tcaacgacgc
      901 gatcgaaaaa ttgctctggc cggaaaaacg actcaacaaa gactcgatct ggcgaaccca
      961 aaacgaatgc acattgcatt tgcgcaaaga gttcgtgccg aaaccgcttc agcgtttagc
     1021 cggcaccgat ggatacatac gcatcggccc gatcccgaag ggcatgccga ttaatttaat
     1081 cggcaacctc gaacccgatc tcggtcaatt ggtcgtgttg caagccaaaa tcgcgaaggc
     1141 gttggtgaag attcacacca tgaatctttc accggaagaa gccacggcag agttggcaaa
     1201 agcggttccc gaattagtgg cagcaaacaa atgtcccgac ttcgtcgaag acaaaggaca
     1261 ttatttcggc acggacctgc cggattcaga caagcgcgcg ctgattgaat acttgaaaac
     1321 gttttagcgc gttaaaagaa aggaaacaaa tggcagtcac ggttccagaa atgttgaaga
     1381 tgtcgcaggc gcagctcgac gatctgttca cgcaaagtcc tgtcggcgaa attccgagcg
     1441 gcgaggctaa gggaacggca atcgtcgggc cgggaacgac ttacacgcaa gatatcgcaa
     1501 atttcatcaa ccattttgcg tggcagggaa aagtttttga tccgagcaaa ggcgtattgc
     1561 gaaacaagat tttgcccttc ggattgaacg cgatcatcgc gaaagtctac aagggttcga
     1621 gctggatgga ccagaaagag tgcatcgtcc tcgactattc cgagacgtcg ctgctggcgc
     1681 attgggtccg cgatgagatt cgcgaagtcg cgccgcgcac ttacctcggc aaagtttacc
     1741 tgggcaaaaa gcggttaatt gatttcgcct tggagtttcc ggctgccacg taatcagata
     1801 gtgcggccat cggaggtgct gtgaattcga acgtcagccg cccaatgccg cgagccaata
     1861 ctggttcgcg gtttctgaac tggctgagcg acaccacgat gttcctcctg cagatggaac
     1921 gccgaatcga tccctggctg cgaccgatat tcgacgccac tctgcgcgat ccagtagcgc
     1981 gcatcgtcac ggcattgatg aacaaaaagc ggaagaacga aggcttgaaa atcgccgagg
     2041 aaaagctgtt gcctaacgag gaggaatttc tcaactccgt catcgagagc tttacaacgc
     2101 aaatgcgagg actctggaaa cccggcggat ttgagcgcgg cgggaacacc aaaactcaag
     2161 gcatcgtccg cggcgagttt atcgttcacg acaatcttcc gccgcaattt cgctacggca
     2221 tctatgccag gccgcaaacg ttccgttgct gggtccgctt ttccggaccc ggtccttaca
     2281 tcacgccgga catcgatgac gtcggattca tgagcatcag catcaaacta ctgggtgtgc
     2341 ccgggccgaa attgatggat gaggagaaat ttaccctgga catgttcggc gtctctacgc
     2401 ccacatttgt cacacaagac ataaagtcga atgcgcatct gcaaaaatgg agcgtgaaaa
     2461 atgcgcaaat ttttcatttc gttaatttcg aggaacctca catcgcggac atgatcatgc
     2521 aggggttgtg ggtgaaaacc cagagcagcc cgtttgaagc tccgtacttt agctgcgtgc
     2581 cctatctgct gggcgaaggc caggcgatgc aatattcggt ctggccgaaa acgaacaaga
     2641 aaactcccat cccgcgactg ccgctgcgtc cgccagatga ttatctgcgc aatgcgatga
     2701 tcaaggcgct cagcgaagga gacgtggaac tcgactttcg gttgcaattg cagaccgatc
     2761 ctttcctgat gccgattgaa aacaacggcg tgctctggcc ggagaaactt tcgccacggg
     2821 tatcagtagc aacacttcgg ctgccaaagc agaaattcga ttcgcccgca caaatggaat
     2881 ttgccaggaa gctctcttac aacccatggc ataccatcgc cgagcatcgg ccgctgggta
     2941 atcaaagccg tgcccggcga cggatgtatt tcgagttatc acagctacgc cataacatga
     3001 acaaggtgcc tcattacgag cccacaggtg atgaggtgtt cgagcaggcg ccatgactcc
     3061 tcagtcgaac ttcatggtgc tcgcgccgat tattccggag cgcgagaccg agcttcggca
     3121 gttgctcgat tcgatgaacc gtggatcggg acaggtggat ccgaacaacg ccttgttgcc
     3181 ttttgctgat ttcgagatgc tccacttcgc gcgattcatt atcctcgacg acaaaacgac
     3241 cgaggatgtg cgcgtctatg gattaaagcc ccgcacttat ccgctttatc tggcgtttct
     3301 cggagatgtc gacggcgatg cgaatgcgtt tctgggcaag ttgatcaaac gcgccggcaa
     3361 aggtttgggg aaaatttttt catgctgtca gggattcgcc gctgacacgg accttttcga
     3421 ttggatgaaa caacacgacg ccccggctat cgctgtctac gtgaattggc gcgggcgaac
     3481 cgtgcgccaa attcgcgaag aggccgcggt ttacgatgcg cttgagaatt acatcgaaaa
     3541 acacgcggca agtctgcatg ggttagcgcc gcgcgaggct catgagaaat tgcgagcctt
     3601 cgtcagcgcg gagcaatcgg caggacggct aacattatca aaagaaggtc ggacaccgat
     3661 cgggtggcag atcaaaaatc tgctgcacat gatcgggttt ccattgctgg gtttgttgct
     3721 atcgccactg cttctcgttg ccgcgccgtt ttatatcttt gcgcttcgcc gtttggagaa
     3781 aagcgatccc gtggtttgtc ccactgtaga tcagaaacat tctgagaacc tctcgagctt
     3841 cgaggaccac gatgtcacga atcaattcag cgccatgggc agtttgaaac ccggtctggt
     3901 gcggctgttg acggccagcg tcgtgctcaa gacggtcaat tacggcgcgc gccatatcac
     3961 ccgtcccagc cggctcggtc gaatccgttc gattcacttc gcgcgatggg tctttgttgc
     4021 tggccgggag cgaatgatct tttgcagcaa ctacgacggt agcgtcgaga gctacatgga
     4081 tgacttcatc aacaagacag gttttggact gaacgcgtcc tttagtaatg ggatcggtta
     4141 tccaagaacg aattggctcg tgcgggatgg ttgcatagat gagcgaaact ataaggaata
     4201 cctccggcgt catacgttac cgagccaggt ttggtacaag gcttatccag gacttagcgc
     4261 ggttgatttg gaaaaaaaca ctcggattcg tcagggcttg gagatgtcat cgatcagtga
     4321 cgagcaagcc cgcgagtggg tcacgttgtt atgagcgaag tggattatgc cgacgtgcaa
     4381 ggtctcgtcc ggtttggata cggtcacatg acgagtgcgt cgtatgcgct cgtgcgcgtg
     4441 aaaaacgcag atgcggccaa agcctggctc cgctcggctc cggtaaccac cgctgttgcg
     4501 caaaagccgc cacccgagac tgcgatgaat atcgcgttca cggcacccgg ccttagaacg
     4561 ctcggtgttc cgcagtcaat cattgccggc ttttcgcatg agtttcgtgg gggcatggga
     4621 caagaaagcc gcgcgcgaca actaggcgac gtcggtaaaa acgcaccatc aaactggact
     4681 tggggcagcg acgggcgcga gccgcatgcg ttggtaatgt tctttgccga gcagggccac
     4741 ctcgattcat tcatgcaaag agccggagac cagaactgga gtgaagcatt cgaggagatc
     4801 acttcgcttg gcacgagtaa tctcgacggc gacgaaccgt tcggatttgc cgacggcatc
     4861 agccagccgc agatcgattg ggagcagcaa ctagagaggc cgtgcactca attgggatac
     4921 accaacattt ccgcgctggg tgagttcttg ctcggttatc gcaacgagta cggaaagata
     4981 accgatcggt ccttggtcga gtccgacgcc gccgcagcag agttgctcaa tgcagaggac
     5041 gcgctcgcga aaaaagatct ggcacgaaac ggaacctatc tggtgatgcg gcaactggaa
     5101 caggacgtcc ggggcttctg gaagtttctt tatgagcaag ctgacggaag cgttgcggac
     5161 gccaaccaat tgggcgcgaa aatggtcggc cgtacgcgag caggcgatcc tttggtgccg
     5221 atccaggctg aaccgattcc cggcacagat ccgcggaccg ttgcgcagaa tcaatttact
     5281 tatgagagcg atccagttgg cgcgcggtgt cctttcggcg cacatgttcg ccgaacgaat
     5341 ccgcgcagca gcgattttcc cgagcggcgc cccaacgcac ttcggaaact aatgattatg
     5401 ctgggtttcg gtccgaaggg attctacgac gacctaacat catcggttcg gtttcatcgt
     5461 attctgcgcc ggggtcgtga gtacggttcg gagctattgc ccgaagaagc gctgcaggca
     5521 ccgccgccta acgagtcgcc tcgcggatta catttcatct gtctcaatgc caatatttcg
     5581 cgccagttcg aattcctgca aaacgcatgg ataacaaaca ccaagttttc aggcataaca
     5641 ggagaaagcg acccgctact tggcactcgt gaatcaatac cggggtgccc ggttacgggc
     5701 aactttacca ttcctggcga gggcacgctg cggcggcgcg tgtccggcct gccacaattt
     5761 gtaacggtcc gcggcggcgc ctatttcttt ctgccaagct tacgcgcgct acgctatttc
     5821 gccggagctt gacggctggt cagtagcggg tcgtcgcgcc aagcatgaaa agcgcttgtg
     5881 cgcacggctg ttctccggaa gtttcgttcc ggtatggcat ccgatcgcag gctgggttgt
     5941 cttagcatct ttttgttcat cgcgctttgt gccagtctgt tcgtgaactt tgtgttgatg
     6001 atcgccgcgt ttcagcgcgt cggcggtatc agggacgcag aaccaatccc gcgtttccgc
     6061 gagatcctgc ttcaaaaagg tgcccgcgcg accacggaca aaatcgcggt tatcaccatg
     6121 cgcggcctga tcagctcgtc gatcccggga aacgtcagcg attcgatggt ggatgatttg
     6181 cgaacagcgc ttcaacaggc gcgcgaggac catcgcgtaa aagccattgt gctggagatc
     6241 gattcgcccg gcggagaagt caccgcttcc gatgcgatct acagcgcggt tgtcaagacg
     6301 cgcgcgagaa aaccggttgt cgtctacatg gattccttgg cggcctcggg cggatattat
     6361 atttcctgcg gcggcaaatt tttgatggct aatgaaacga cgatcaccgg gagcatcgga
     6421 gtaatcattc aaaccctaaa ttacgagcag ctgttgaaca aagtcggcct agcatccgta
     6481 gtttttaaga gcggcaaatt caaagacatg ttgaacggag cgcgaccgat tacgccggag
     6541 gaacgggagc tcgtgcagaa ctttatcatg agcacgtacg acaaatttct cggcatcgtc
     6601 gcaaaggagc gaaacctgcc ggccgatctt ctccgcaaca cggtcgccga tgggcgaatt
     6661 ctctcgggca aagacgcatt gcagaacaaa ctcatagacg gtctcggcga attagacgac
     6721 gccttcgcca aagcaaaaca attggggaac gcgccggacg cgaaagtcgt gaaatacgga
     6781 ccgccattta gtctttcccg gttcctacgg gtatttggag aatcggattc gaaaatagaa
     6841 ctgcaacttc cgaaacaact tgtgccgcaa ctggaatcgg ggcgcgcgta tttcctaccg
     6901 agttactacg ctccgtaagt gctgaaggta gcgcacactt cagcacaccc tcatgctatt
     6961 cgggaatatt ttggcggcat ccggagcggc cccgagtctt gccctgagtt tgctttccgc
     7021 tctttatttc attgccagtc tttgtgtgta tgtgtcgctg atttatcaga tcagtgcacg
     7081 gattcgaatc gtttccgggg ccgacgcacc ggcgcgcgct tttggactgc cggaagccgt
     7141 tctcgctagt gtcctgatct ttttctttct actaacacta ggctcaacag ttccggatcc
     7201 ggccctccaa tttcacccac gtaatcttct ggccaatttc ctcgtcagcg ctttcgtggt
     7261 gctcgtcata gccactcttt tgcaatttcg cggttttgat gtcggcgcat tggcgggatt
     7321 tttcagaatc aatttttttc gaactttagg cactggagcc attctgctct tttttgctta
     7381 tccgttgatc ggtttttccg aaaccattaa tcagcggttt ttcggtggcg gctcaagcaa
     7441 gcagagcatt gttgagttct ttagtgcatc acgcacgatt gaggagcgaa ttttgatcat
     7501 tgttttcgcg gtcgcaatcg ccccgatcgt cgaggagttt gtttttcgat ttttcatcta
     7561 tggcgtgttc aaacgctacg ttggctgtct tctgggggtg atacttagct cgctgctatt
     7621 cgccgtggcc cacgcacact ttccctcgtt cgtaccgttg tttgtcttgg ggagctgttt
     7681 cgcgattgcc tatgagtgga gcggctcgat tcttgtttcg atgactatgc attccctctt
     7741 caactccttg actctcattg ctctcgcgtt tccagaaatc ctttctcaat gaaactcggt
     7801 gctttgggtg aagaccgatt gcttaaccaa atcttgcttc atcttccgcg tagaagaggc
     7861 gggaaagtct ttgcgggttc agccgacgac tgtgcgattg tcaaaataca acaaagcaaa
     7921 aaatatctcg tgctaaaaac ggactgcgtt gtcgaaggcg tgcattttgt gcgcggaacg
     7981 aaa
//
LOCUS       DATDAJ010000024         2412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_90135, whole genome shotgun sequence.
ACCESSION   DATDAJ010000024 DATDAJ010000000
VERSION     DATDAJ010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90135"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VIS53_00530"
     CDS             complement(<1..295)
                     /locus_tag="VIS53_00530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766296.1"
                     /translation="MRPGYAIYIHRFAHLIVGRTSALVAAMFFTVVFATQAQESIEEV
                     ALPPWSEPTLPSSEPAPSTQAAPLPPAPEAVTSAPEALPPAPAESLPSSPESLP"
     gene            492..1151
                     /gene="queE"
                     /locus_tag="VIS53_00535"
     CDS             492..1151
                     /gene="queE"
                     /locus_tag="VIS53_00535"
                     /EC_number="4.3.99.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR04349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEY5766297.1"
                     /translation="MSEREKTLAINEIYHSIQGESTWAGWPCVFVRLTFCDLRCNYCD
                     TDYAFYEGNKRSLGEILDTVAAYRCPLVEITGGEPLLQKNVLMMMSMLCDSGYTVLLE
                     TSGAHDISKVDPRVHRIMDLKTPGSGEVDKNLWSNIDHLNTGDEVKFVMGSREDYEWS
                     RDKVQRYDLPSRCRAVLFSPIFGRIDPREIVEWILADKLNVRFQLQMHKFIWSPTQRG
                     I"
     gene            1154..1516
                     /gene="queD"
                     /locus_tag="VIS53_00540"
     CDS             1154..1516
                     /gene="queD"
                     /locus_tag="VIS53_00540"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010434567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEY5766298.1"
                     /translation="MRARLTKDFTFEAAQTLPKAPEGHKCRRVHGHSFKVEVSIEGDI
                     DPAIGWIYDHANISAAMKPLLKILDHTYLNDIEGLENPTIENMAEWFWKKLDPQCPGL
                     CEIVVHETPTARCIYRGQ"
     gene            complement(1554..>2412)
                     /locus_tag="VIS53_00545"
     CDS             complement(1554..>2412)
                     /locus_tag="VIS53_00545"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5766299.1"
                     /translation="AGESGVGKEVIANTIHARSRRAEQAMVKLNCAAFPQTMIEGELF
                     GYVKGAFTGAMHDFPGMIAAADGGTLFLDEISDMPADLQTRFLRVLQEREYRPLGSTQ
                     TMKANFRAIAATNRPIPEALAENRLRSDLYYRLNTFQIEVPPLRKRREDIPPLIAQFV
                     RQFSEQLGKPEPDVSPDAFQKLLDYSWPGNVRELQNAIEYAVVLAREGVIGVKELPAE
                     IQLPPALQQTELTGLPRKGVQTLDDLERNAILQALAECRGNKKKAAELLGIQRPTLYN
                     KLKRYAIEL"
BASE COUNT          546 a          646 c          689 g          531 t
ORIGIN      
        1 aaggcaacga ttcaggcgaa gagggtaaag actccgctgg cgcaggaggc aacgcttctg
       61 gtgcagaagt caccgcttcc ggcgcgggag gcagcggcgc cgcttgcgtc gatggcgcgg
      121 gttcacttga gggaagcgtt ggctccgacc acggcggcag agccacctct tcaatggact
      181 cctgtgcttg cgtagcaaaa acgactgtga agaacattgc tgcgacgagt gccgacgttc
      241 ttcccacaat caggtgggcg aagcggtgaa tgtaaatggc ataaccgggg cgcatggcgg
      301 cgagactaga ttgccgccat ataaccgtca atcaaaaaat cttggtaaaa atcacgaaac
      361 tttggagagg ctttaccccg ggagggcgcc gtcggacgca tgtaaagaca gcggggttta
      421 gcaggagaaa tttgctttgc agttgttcgc ataagacgtt ctacatcggc tgagcaggaa
      481 tcttgaagga catgtccgag cgcgaaaaga cgcttgcaat caacgaaatt tatcactcca
      541 tccagggcga aagcacttgg gccggctggc cttgcgtttt tgtgcgcctt acattctgcg
      601 acctgcggtg caactactgc gatacggact acgcctttta cgaggggaac aaacgaagct
      661 tgggcgaaat tctggacacg gtcgcggcgt atcggtgccc tttggtcgag attacaggcg
      721 gggaaccatt gttgcagaag aacgtgctga tgatgatgtc gatgctgtgt gactccggtt
      781 acacggtgct gctcgaaacc agcggtgcgc atgacatatc gaaagtcgat ccgcgcgtgc
      841 accgcatcat ggatctaaaa accccgggga gtggcgaagt ggataagaat ctttggtcga
      901 acattgacca cctcaatact ggcgatgaag tgaaattcgt catgggctcg cgcgaagatt
      961 acgagtggtc gcgcgataaa gtgcagcgct acgatcttcc gtcccggtgc cgcgccgtgc
     1021 tcttctcccc aattttcggc agaatcgatc cgcgcgaaat cgtggagtgg attctcgcag
     1081 acaaactgaa cgtccgtttt caacttcaga tgcacaaatt catctggagc ccaactcagc
     1141 gcggcatctg attatgcgcg cccggttaac gaaagacttc acatttgaag cagcgcagac
     1201 gttgcccaaa gcgccggagg gccacaaatg ccggcgggtg cacggacaca gtttcaaggt
     1261 cgaagtttct attgagggtg atatcgatcc ggcgatcggc tggatttacg atcacgcgaa
     1321 catcagcgct gcaatgaagc cgcttctaaa aatcctggac cacacgtatc tcaacgacat
     1381 cgaaggattg gagaatccga cgatcgaaaa catggccgaa tggttctgga agaaattaga
     1441 ccctcaatgt cctggcctct gcgaaatcgt agtgcacgaa acacccactg cgcgttgcat
     1501 ctatcgcggt caataaggac cagcggttag aacgccatgg ctcctggtgc agcctacaac
     1561 tcaatcgcgt agcgtttcag cttgttgtaa agggtgggtc gctgaatccc gagcagttcg
     1621 gctgcttttt tcttgttccc gcggcattcg gcgagcgcct ggagaatcgc gtttcgctcc
     1681 aagtcgtcga gggtttgtac ccccttgcgg ggcaacccgg tgagttcggt ttgctgcaac
     1741 gccggaggca actgtatttc tgccggaagc tctttaacgc cgatcacgcc ctcccgcgcc
     1801 agcaccaccg cgtattcgat ggcgttttgc agttcgcgaa catttcccgg ccacgaataa
     1861 tcgagcaact tctggaatgc atccggtgaa acgtccggct ccggtttgcc gagttgttca
     1921 gaaaattgcc taacgaattg ggcgatcaac ggcgggatgt cctctcttcg tttccgtagc
     1981 ggtggcacct caatctggaa agtgtttaaa cgatagtaca agtcggagcg cagccggttc
     2041 tcggcgagtg cctcgggaat gggcctgtta gtcgcggcaa ttgctcgaaa gttcgctttc
     2101 atcgtctgcg tgctgccaag aggccgatac tcgcgctctt gcaacacgcg gaggaaccgc
     2161 gtctgcaaat ctgctggcat gtcggaaatt tcgtcaagaa acagcgtgcc gccgtctgcc
     2221 gcggcgatca ttcccggaaa atcgtgcatc gctccggtaa acgcgccttt cacgtaaccg
     2281 aaaagttctc cctcgatcat tgtttgcggg aacgcagcgc aattgagctt caccatcgct
     2341 tgttcagcgc gccggctgcg ggcgtgaata gtattggcga tcacttcctt gcccacgccg
     2401 ctttcgcctg cg
//
LOCUS       DATDAJ010000025         3023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_93172, whole genome shotgun sequence.
ACCESSION   DATDAJ010000025 DATDAJ010000000
VERSION     DATDAJ010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3023
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93172"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VIS53_00550"
     CDS             complement(<1..225)
                     /locus_tag="VIS53_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766300.1"
                     /translation="MKLAPELEFHDDLHLLIYRPHGVIDETAVKKVVDVLEDLEAKLQ
                     KPFNRFFDTLGADEVELNFKYVIQVSLCRRL"
     gene            complement(222..689)
                     /locus_tag="VIS53_00555"
     CDS             complement(222..689)
                     /locus_tag="VIS53_00555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766301.1"
                     /translation="MTLPPDIEFLEDIRLFIYRPRGLLDEASVTRAVNLLTDLEAMLK
                     EPFNRFSDTSAIDRVELNYQYVIQVSLYRVLSYTDRPPVKSAILATDATVGHYFQLHA
                     VITQGSPINVRIFQQRDDAAKWLGVALERLSENSVQATNESGNQPNGSAFNKQ"
     gene            complement(763..1143)
                     /locus_tag="VIS53_00560"
     CDS             complement(763..1143)
                     /locus_tag="VIS53_00560"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5766302.1"
                     /translation="MAQMLQSGSGAIVNNASIARVIAEPGISAYIAAKHGVIGLSKAA
                     AVEYANTGIRINTLAPGLVNTAMTKAWFDDPHMRAFHREHADRPCLTAGRNSRHGFIS
                     LFRSRLVRCWPDVRDRWRLHDSLT"
     gene            complement(1336..1743)
                     /locus_tag="VIS53_00565"
     CDS             complement(1336..1743)
                     /locus_tag="VIS53_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766303.1"
                     /translation="MKTQQSQLTVILIFVAAVTALFVVGCAEVGSGNTTSLLTAAGFR
                     ARTPQTPQQQQIYAALPPYQVHRAAVKGRTFYVYKDEKAGIAYVGREQEYQRYRELAV
                     QQQIAQNYYMAAEMDRAAAFGWYGAWGPRTFWW"
     gene            complement(1821..2201)
                     /locus_tag="VIS53_00570"
     CDS             complement(1821..2201)
                     /locus_tag="VIS53_00570"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5766304.1"
                     /translation="MSESADAQANEVCIVDDDPSVLKSMHYLLASEGFNVRPFNKAQD
                     FLAHAGAHHVPVVVTDIWMDQVTGLELLARLCAISPRTKVIVITAREDLAARATAMAI
                     GPVAFFMKPFNDEKFIAAVRNALS"
     gene            complement(2198..>3023)
                     /locus_tag="VIS53_00575"
     CDS             complement(2198..>3023)
                     /locus_tag="VIS53_00575"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5766305.1"
                     /translation="DEHGNILETIGVTLDVSAQKQAALHLQVQREEMAHRNRVALMGE
                     MTASFAHEINQPLTAISNKASAARRFLDRGNIDPVLLRELLQEIAADSQRAGEVMRGI
                     RSLVRKETSEQTLLNLNAIISDTVRLVSSDVLNRESVITTELDPSVPGVQGTLVQIQQ
                     VLLNLIINALDAMETLPAPERRVVVSTRSDKGDVAEFTVRDFGTGLPKDRPDKVFDHF
                     FSTKQKGMGMGLAIVRSIIEAHGGTISGENASDRGARMVVRLPAARGEIQKSKAAA"
BASE COUNT          697 a          797 c          802 g          727 t
ORIGIN      
        1 aaggcgccgg cagagagaga cttgaatgac gtatttgaag ttaagctcga cttcatcggc
       61 tcctagagta tcgaaaaatc gattgaacgg cttctggagc ttggcttcga gatcttcgag
      121 aacgtccaca acttttttaa cagccgtctc gtcgatcaca ccgtgcggtc gatagatgag
      181 cagatggaga tcgtcgtgga attcgagctc aggtgcgagt ttcattgttt gttaaaagca
      241 gatccgtttg gttggttgcc gctctcgttt gtcgcttgca cggaattctc actgagccgt
      301 tccagcgcaa cacccagcca tttcgcggcg tcgtctcgtt gttggaatat tcgaacattg
      361 atcggcgacc cctgagtgat tacggcatgc agttgaaaat agtggccgac ggtggcgtcg
      421 gtcgcgagaa ttgccgattt taccggtggc cgatctgtgt aagaaagcac tcgatagagg
      481 gaaacctgaa tgacgtattg gtaatttaac tcgactcgat cgattgccga cgtatcggag
      541 aaccgattga acggctcctt tagcattgcc tcgaggtctg taaggaggtt aacagctcta
      601 gtgaccgaag cttcatccag taaaccccgc ggtctgtaaa tgaacagacg aatgtcttcg
      661 agaaattcga tatcaggcgg aagagtcatc accgttacca tcgttcaggc gatttttaaa
      721 atgacctttt ttgaatccgc agccaagccc gaaaatcaga gtttaagtca atgagtcgtg
      781 tagccgccat cgatcacgaa cgtctggcca acagcgaacg aggcgagatc ggaacaaaga
      841 aatgaaacca tgccggctat ttctgccggc cgtgagacac ggccgatcgg cgtgttcgcg
      901 atgaaatgcg cgcatgtgtg gatcatcgaa ccatgccttc gtcattgcgg tattcaccag
      961 tccgggcgcc agcgtgttaa tgcgaatccc cgtatttgcg tattcgacgg cagccgcttt
     1021 ggacaatcca atgacgccat gtttggcggc gatataggcg ctgattccgg gctcggcgat
     1081 cacgcgggcg attgaggcgt tattcacgat tgcgccactg ccgctttgca gcatctgcgc
     1141 gatctcgtgc gatctcggcc agccgccaga tcaatgtgga acaaccagaa tagaaacccg
     1201 cactaccaat gcacagatca tcgcaaatgc ccatgttggt ccagaacccg aaacctcgct
     1261 tgccgttcgc ggcccccttt ggcctcagca gctggtgctg tttgaatcga aacttacgtc
     1321 tttagcatca agcgttcacc accagaaagt tcgcgggccc catgctccgt accaaccaaa
     1381 tgcggctgca cggtccattt ccgccgccat gtaatagttt tgggcaatct gctgctgaac
     1441 cgccaactcg cggtaacgct ggtactcctg ttcccggccg acgtaggcaa tccccgcttt
     1501 ctcgtctttg taaacgtaaa aggttcttcc tttcacggcg gcccggtgga cctggtaagg
     1561 tggcagagcg gcatagattt gttgttgctg cggcgtctgc ggggtgcgcg ctcggaatcc
     1621 ggctgcagta agcagggatg ttgtatttcc tgatcccacc tcggcacaac caaccacaaa
     1681 gagcgcggta acagctgcga cgaagatgag aatgacggtt aattgcgatt gttgtgtttt
     1741 cataatgcgt acctgtttta agtgaattga gcagatgttg tcgaggctga agtcacaaag
     1801 cgagaagaag agcttgagcc ctagctcagc gcattacgga ccgcggcaat gaacttttcg
     1861 tcattgaacg gcttcatgaa aaatgcgact gggccaatgg ccatggcggt ggcgcgcgcg
     1921 gctagatctt cacgcgcggt gatgacgatc acttttgtgc gcggtgagat ggcacagagt
     1981 cgcgcaagga gttccaaacc tgtcacctga tccatccaga tatcagttac gacgaccggc
     2041 acatgatgag cgccggcgtg tgccagaaaa tcttgcgctt tattgaatgg gcggacgttg
     2101 aatccttcgg aggcgagcag gtaatgcatc gatttgagga cggaaggatc gtcatccacg
     2161 atgcagacct cattcgcttg cgcgtcagcc gattcgctca tgccgccgct ttacttttct
     2221 gaatttcccc ccgagcagcc ggaagacgaa caaccatgcg cgcgccgcga tcagaggcat
     2281 tctcgccgct aatcgttccg ccgtgagcct caataattga tcgaacaatg gcgagaccca
     2341 tacccattcc tttttgtttc gtggaaaaga agtgatcgaa aaccttgtcc ggacgatcct
     2401 tgggcaatcc cgttccgaaa tcgcgcaccg taaattcagc gacatcgcct ttatcggagc
     2461 gcgtactgac aacgacgcgt cgttctggcg ccggaagtgt ttccatggcg tcgagtgcgt
     2521 taatgatcag gttcagcaat acctgttgaa tttgaacaag agttccctgc actccaggca
     2581 cgctggggtc gagctcagtc gtgataacac tttcgcgatt caatacgtcg gagctgacga
     2641 gccgcacggt atctgaaata attgcattga gattcaacag cgtctgttcg ctggtttctt
     2701 tgcgcaccaa acttcgaatc ccgcgcatta cttctccggc acgctggctg tccgccgcta
     2761 tctcctgcaa taattcccgc agcaatacag gatcgatatt tccacggtca agaaaacgac
     2821 gcgccgcaga ggctttgttc gagattgcgg tcaaaggctg attgatttca tgcgcaaagg
     2881 acgcagtcat ttcgcccatt aacgccacac gattgcgatg cgccatttct tcgcgttgaa
     2941 cctgaagatg aagcgcggcc tgcttttgcg cactcacgtc aagcgttact ccaatggttt
     3001 ctaaaatgtt gccgtgttca tct
//
LOCUS       DATDAJ010000026         4646 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_95122, whole genome shotgun sequence.
ACCESSION   DATDAJ010000026 DATDAJ010000000
VERSION     DATDAJ010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4646
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95122"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VIS53_00580"
     CDS             <1..456
                     /locus_tag="VIS53_00580"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5766306.1"
                     /translation="LAPTDFSECSLAGFDYAVQLAREFKAELRLIHVINPHLYPFGDK
                     YAALDPVQLMDKAAHVAENQMRSMAAGAKARYSVRAIQGAPAIQIRNAANEDVDLIVI
                     STHGRTGLGHILIGSVAEHVVRYAHCPILVIPARRNPVNSTSTLKNEDA"
     gene            443..937
                     /locus_tag="VIS53_00585"
     CDS             443..937
                     /locus_tag="VIS53_00585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766307.1"
                     /translation="MKTLKTIGFVWLCMLSTSFAAARAPASGSANSAPTPFTFANAVS
                     FFKAAKFRATEVQPRCAIFFEGEWKSANVYDYCVIIVENSDEDIQVTFYLTDAHEMNW
                     VTEFLDSQFFNRNETEKLFQLMNARSDVRGQNVGRFRVDFHHWQPRHAQLLVFSFTPI
                     RGGR"
     gene            956..1618
                     /locus_tag="VIS53_00590"
     CDS             956..1618
                     /locus_tag="VIS53_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEY5766308.1"
                     /translation="MKTQFLNRTEAGQFLAEILSTYANRDDIIVLALPRGGVPVAAEV
                     AKKLNAPLDVFVVRKLGLPGHPELAMGAIASGGVRVFNGEVVNALRIPDEVMDAVSAE
                     ELAELQRREKVYRAGLPPIDIEGKTIIVVDDGIATGSTMLAAVSALRQLNAARIIIAA
                     PVVAASTFREMQRAADEVTAVIMPERFYAVGQWYEDFSQTSDEEVRDLLTRAARRQPV
                     AA"
     gene            1722..1955
                     /locus_tag="VIS53_00595"
     CDS             1722..1955
                     /locus_tag="VIS53_00595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY5766309.1"
                     /translation="MKSRIFFAEQGANRFGVQAYRRAANVLRRLSRSVADVFKREGVE
                     LGRFVPRLEFTAPALKQDRHFQYSDQTVRNIRS"
     gene            2018..2773
                     /locus_tag="VIS53_00600"
     CDS             2018..2773
                     /locus_tag="VIS53_00600"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY5766310.1"
                     /translation="MKLINPLDHPHSGKAAILIAIALVLGITVHELFFLIALLIAAIA
                     CIEWGAHEVHVIHELHERKTHSQPQPAPLASRAAHHPFFAGMSRTHLALLSDCAIAAH
                     FEKGQTILREGEFAKGFYLIESGEAVLESSEESGQPLVVDTIGPGDPLGWSWMFPPYV
                     WRFTAIAVEPIDAIFFYGTTLREYCEKDHSLGYELLKRTALVMLRRLQASRERLLSIL
                     RELDAYENENEGKDRVHFQAIKSENGRMHCTPN"
     gene            complement(2851..3072)
                     /locus_tag="VIS53_00605"
     CDS             complement(2851..3072)
                     /locus_tag="VIS53_00605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766311.1"
                     /translation="MTDDFAPAVIAFGSYHMDRTLEAVEDVRFVFEPDLERFVVVVSA
                     MFTLGHKFLLLSYIPFWLDFIFLESTMTI"
     gene            3342..4307
                     /locus_tag="VIS53_00610"
     CDS             3342..4307
                     /locus_tag="VIS53_00610"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5766312.1"
                     /translation="MTPDTSTTPQTRDNPLEFKIEKILVPLDFSPASLDALDYAVWLA
                     KQFRAAIDLVHIYPTDEASSEPSAAHLLLQSAEAIERLNEELTGIHRKHVPTFRPENC
                     HIRAGRPYEQIVGVAREHDAELIALSTRGHSGLKHLLLGSTAERVVRNAPCPVLVTRK
                     RKQKSKANSKTFPIRTILVPTDFSQCSLAGTEYAAFLAKNLHATLRLFHAMYPYTNYV
                     YVDRAGVRLSGLAEAEEETARQEMDALKQMDFLHGVSVQTEILPGLAVDEICAAAGDR
                     EVDLIVTSTHGRTGVKHALIGSVAEHVVRYAGRPVLVVPSRHAES"
     gene            4377..>4646
                     /locus_tag="VIS53_00615"
     CDS             4377..>4646
                     /locus_tag="VIS53_00615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766313.1"
                     /translation="MKKQLRVDSEFIMSALKLCFFLQVVLAMPALAQTPSEQNSPLPS
                     QAKQLHGLAVPVPKEIFRTLDQFRNANWRAVRRPEVARWKSHGDQA"
BASE COUNT         1120 a         1250 c         1246 g         1030 t
ORIGIN      
        1 cttgccccga cggatttctc cgaatgttca cttgccggat ttgattacgc cgttcaactg
       61 gctcgcgaat tcaaggcgga gttgcgactg atccacgtga ttaatccgca cctctatccg
      121 ttcggagata aatacgcggc gctcgatccg gtacaattaa tggataaagc cgcgcacgtc
      181 gctgaaaacc agatgcggtc aatggcagcg ggagccaaag ctcgatattc tgttcgcgcg
      241 attcaaggtg cgcctgcaat ccaaatccgc aacgctgcga acgaagatgt cgatctgatt
      301 gttatttcca ctcatggtcg aacaggactc ggccacatcc tcatcggcag cgtagcggag
      361 cacgtcgtgc gttacgcaca ttgccccatc ctcgttattc ctgctcgccg taatccagtc
      421 aactcaacca gcacactcaa aaatgaagac gcttaaaacc atcggttttg tttggctctg
      481 catgttaagc accagcttcg ctgcagcgcg agcccccgcc agcggatcgg ctaattcagc
      541 accgacgccg ttcacgttcg ctaatgcagt ttcgtttttt aaggcggcca agttccgcgc
      601 aactgaagtg caaccgcgtt gcgcaatctt cttcgaaggc gaatggaaga gcgcaaacgt
      661 ttacgactac tgcgtcatca tagttgagaa ttccgacgaa gacatccagg tcaccttcta
      721 cctcaccgac gctcacgaga tgaattgggt gaccgagttt ctggattctc agttctttaa
      781 tcgtaacgaa accgaaaaac tgtttcagct gatgaacgca cggagcgacg tgcgcggcca
      841 aaacgttgga cgcttccgcg tcgatttcca tcattggcaa ccgcggcatg cgcagctttt
      901 ggtgtttagc ttcacgccca ttcggggtgg tcgttaggca actttcgcga acaatatgaa
      961 aacacaattc ttaaatcgaa ctgaagctgg tcagtttctc gctgaaatcc taagtaccta
     1021 cgcaaaccga gacgacatca tcgttctcgc gcttccgcga ggcggcgtgc cagtggcggc
     1081 ggaagtggcc aaaaaattaa atgcgccgct tgatgtgttt gttgttcgca agctcggctt
     1141 gcccggccat cctgaactgg ccatgggcgc aatcgcctcc ggtggcgtgc gcgtgttcaa
     1201 tggtgaggtc gtcaatgcgc tgcggattcc cgatgaagtc atggacgccg tcagtgcgga
     1261 agagttggcc gagcttcaac gacgcgaaaa agtgtatcgc gcaggtttgc caccaatcga
     1321 catcgaagga aaaaccatca ttgtcgtcga tgatggcatc gcaacgggat cgaccatgct
     1381 cgcggcggtt tccgcgctgc gacaattgaa tgccgcgcga atcataatcg cggcacctgt
     1441 cgttgcggct tccaccttcc gcgagatgca acgcgcagcc gatgaggtga cggcggtgat
     1501 catgccggaa cgcttctacg cagtcggtca atggtacgaa gatttttcac agacaagcga
     1561 cgaggaagtt cgcgaccttc taacgcgggc tgcgcgccgg cagcctgtgg ctgcctaact
     1621 gtttgatgca aaggcgtgac acagggagat gaaatcaggc ccgctgcgga ttgggcgaaa
     1681 tgtgaacacg agcccgaaca ttgaaatcgc aggccggcgc gatgaagtcg cgaatatttt
     1741 ttgcggaaca gggcgcgaac cggttcggtg tgcaagcgta tcgacgagcc gcaaacgtgc
     1801 tccgtcgttt gtcgcgttca gtggctgatg ttttcaaacg cgaaggggtc gaacttggac
     1861 gctttgttcc tcgtttggag ttcaccgcac ccgctttgaa gcaggaccgc cattttcaat
     1921 atagcgacca aacagttcgc aacattcgct cataaaaagg caagcgatgg ttagctgttc
     1981 tcggaacgag cgatcagatt gtaccggaaa ggcatttatg aaactaatca atcctttaga
     2041 tcatcctcat tcagggaaag cagcaatctt gatcgccatt gctcttgtgc tgggaatcac
     2101 cgttcatgaa ctattctttc tcatcgcgct gcttatcgcg gcgatcgcgt gcattgaatg
     2161 gggcgcacat gaagttcatg tcattcacga gcttcacgaa cgcaagactc acagccagcc
     2221 gcaaccggca cctttggcgt cgcgcgcggc gcatcatcca ttttttgcag gaatgagccg
     2281 cacgcatctg gcgttgctaa gcgattgcgc gatcgctgct cacttcgaga aagggcaaac
     2341 gattttgcgc gaaggcgagt tcgcgaaggg attttatttg atcgaaagcg gcgaggcggt
     2401 gctcgagtcc agcgaggaat ccggccaacc gctggtagtg gacaccattg gtccggggga
     2461 tccgcttggc tggtcgtgga tgttcccgcc gtacgtctgg cggttcacgg cgatcgcggt
     2521 cgaacccatt gacgccatct ttttctatgg gacaacttta cgagaatatt gcgaaaagga
     2581 ccactcgtta ggctacgaac tgctcaagcg aacagccctg gttatgctta ggcgcttgca
     2641 ggctagccgg gagaggctgc tctccatcct tcgggaactc gatgcctacg aaaacgagaa
     2701 tgagggaaaa gatagggtac attttcaagc gataaagagc gagaatggac gcatgcattg
     2761 cacaccaaac tgaagggagc atgtcgagtt cgatctcgtc aaattgccag cagcagcgct
     2821 cccgtcgcac tttcgctcgc ttcaaccgat ttaaattgtc attgtgctct caagaaagat
     2881 gaaatcgagc caaaacggaa tgtaagaaag gagcaaaaac ttatggccaa gtgtgaacat
     2941 tgcggaaacg actacgacaa aacgttcgag atcaggttca aagacaaaac gcacgtcttc
     3001 gacagcttcg agtgtgcgat ccatgtgata gctcccgaat gcgatcactg cgggtgcaaa
     3061 atcatcggtc acggtgttga aaacggcagc agaatatttt gctgtgcgaa ttgtgccaga
     3121 gagagcggcg aaaaccggct gcgcgatcgt gtttaagcca ttgccatctc atgatgtcat
     3181 cctgagtgga gcgaaggatc tcggatcgat ttttggaccg atcctcccaa tggaaataaa
     3241 ccagagatgt ttgaaagcct ggcctcatgc ttcgcatttc gttgcagcgc tccgctcaac
     3301 atgacagcgc tatgtaaagg cggcgttttc accgattaaa tatgacaccg gatacttcca
     3361 caaccccgca gacgcgggat aacccgttag aattcaagat tgaaaaaatt ctagtgccac
     3421 tggatttctc gcccgcatca ctggacgcgc tcgattatgc tgtttggctg gcgaaacaat
     3481 ttcgcgcagc cattgatctt gtacacatct atccgacgga cgaagcgtcg tcagagccga
     3541 gcgcagcaca tctcctcttg caatcagcag aggcgatcga acggcttaac gaggaattga
     3601 ccggtattca tcgcaaacat gtaccgacat ttcgtccgga gaattgccac attcgtgccg
     3661 gccgaccgta cgagcagatt gtcggtgtgg cccgcgaaca tgatgctgag ttgattgcgc
     3721 tttcaacacg cggccatagc ggcctgaagc atcttctgct cgggagcacg gcggaacgag
     3781 tcgtccgcaa cgcgccgtgc cctgtacttg ttacacggaa acgaaaacag aaatcgaaag
     3841 cgaacagcaa aacattcccc atccgcacca ttctggttcc cacagatttc tcgcaatgtt
     3901 cgctcgccgg aacggagtac gcggcgtttc tggcaaagaa tcttcacgct acgctgcgcc
     3961 tgtttcacgc gatgtatcca tatacgaatt acgtatacgt tgaccgcgcc ggcgtgcgtc
     4021 tgtcggggtt ggccgaagcg gaggaggaaa cggcacggca ggaaatggac gcgctgaagc
     4081 agatggattt tttgcacggc gtgtccgtcc aaacagaaat tctccctggc ctcgcggtcg
     4141 acgaaatctg cgccgcagcg ggcgaccgag aggttgatct catcgtcact tctactcacg
     4201 gtcggaccgg agtgaagcac gcgctcatcg ggagcgtcgc agaacacgtc gtccgttacg
     4261 ccgggcggcc ggtgttggtt gtacccagcc gtcacgccga atcctaacgc gaaaaacgta
     4321 tgccgaattc tccagccgat gttattagcg aaaaggcaga agcgcaggtg ggcgcgttga
     4381 agaaacaact ccgagtagat tctgaattca taatgtccgc actaaaactc tgcttctttc
     4441 ttcaggttgt tcttgccatg ccggcgttgg cccaaacgcc ctctgagcaa aacagcccac
     4501 tcccgtccca agcaaaacag ttgcacggtc tcgccgtacc agtgccaaaa gagatattcc
     4561 gtactctcga ccaattccga aacgcgaact ggcgcgctgt aagacgtcct gaagtagctc
     4621 gctggaaatc acatggtgat caggcc
//
LOCUS       DATDAJ010000027         2706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_105319, whole genome shotgun sequence.
ACCESSION   DATDAJ010000027 DATDAJ010000000
VERSION     DATDAJ010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2706
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105319"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..521
                     /locus_tag="VIS53_00620"
     CDS             <1..521
                     /locus_tag="VIS53_00620"
                     /inference="COORDINATES: protein motif:HMM:NF024898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5766314.1"
                     /translation="AIWNIFHEVVAAGDTYALDPNISREGALAYWFAPGTHTYVAEED
                     AVADGVAVPRKPTASPIITRPRQILGTYILRPNQSGGGSHVANAGFMVSASARGQGIG
                     RAMAQHCLSEARRLGFRAMQFNYVICTNTAAIRLWQDLGFEIVGTLASAFRHPDRGYV
                     DVYVMYRSLLEK"
     gene            609..929
                     /locus_tag="VIS53_00625"
     CDS             609..929
                     /locus_tag="VIS53_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766315.1"
                     /translation="MQTVIQVIATGTGSLREKIMTDPQLGRFNLIPSEHQRPGRPHGW
                     AKIHSETAHGAINLEWHGRSRTLICRVVTKLGNKPNSIIGDFVDYLLARHQSRILAVH
                     IMRR"
     gene            complement(969..>2706)
                     /gene="glmS"
                     /locus_tag="VIS53_00630"
     CDS             complement(969..>2706)
                     /gene="glmS"
                     /locus_tag="VIS53_00630"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEY5766316.1"
                     /translation="KCAGRISALTKLVKKQPVSGSLGISHTRWATHGSVNDENAHPHF
                     DASGKLALVHNGVIENYQALKDELVRSGDTKFRSDTDTEVLAHLIGKLYDDSCASTMD
                     APGKKARLFDAVRAALRQVIGTYGIALIHADVPDFMIGARRGSPLVLGVGNGENFLAS
                     DVSAIVAYTRDAVYLNDFDVVAAGPDKFEISSLAGDSTEHPVSKVDFTAEDVGKGDYP
                     HYMLKEIFEQPDTVRDAMRGRLNTEESTAKLGGLNMAAPQLRDVGRIVLTGCGTALHA
                     ARVGEYLIERMASIPTEVDYASEFRHRNTPMTPETLVFAISQSGETADTLGALRESRR
                     KGFRSLGICNNVASTIARESDGGVYMHAGPEIGVAATKSFTSQLTILTLLALLFGRMR
                     NLATAEGTRVIGALQALPEQIETVLELNDHIKEIAGRYANANGFLFFGRQFNFPLALE
                     GALKMKEITYLFAEGHPSAELKHGIIALIRPDLPSVFIAPDDSVFSKNLNNIEQVKAR
                     KGPIIAVTSGNCMKHLKGIASEVIVLPEAPDYVMPILAVIPLQLLAYHVAVALGRDVD
                     KPRNLAKSVTVE"
BASE COUNT          570 a          771 c          759 g          606 t
ORIGIN      
        1 aggcgatttg gaacattttc catgaggtcg ttgcagccgg ggatacgtat gcgttggatc
       61 cgaacatctc gcgcgagggt gcgctggcgt actggtttgc gcccggcacg cacacgtacg
      121 tggcggagga agatgctgtg gcggacggcg ttgccgtccc acggaagcca acggcttcgc
      181 ctataatcac ccgaccgcga cagattctag gcacttacat cctgcggcct aaccaatccg
      241 gtggcgggtc gcatgtcgcc aacgcaggat tcatggtctc agcgagcgct cgcgggcagg
      301 ggatcggtcg cgcgatggcc cagcattgct tgagcgaagc gcgccggctt ggttttcgcg
      361 cgatgcaatt caattatgtg atttgcacga acaccgctgc gatccgtcta tggcaggacc
      421 tcgggttcga aatcgttggc acgttggcga gtgcgttccg tcatcccgat agaggatacg
      481 tcgacgttta cgtaatgtat cgctcgctgc ttgagaaata ggcacgtttg gctcgcccgg
      541 cggtcgcgcc ctaccaacca aagaatcatt gcaaaagaag cggtttcctg ctgaacctaa
      601 gcagtggaat gcagaccgta attcaggtaa tcgcgaccgg gacgggatcg ctgcgggaaa
      661 agatcatgac cgatcctcaa ctcgggcggt ttaatctaat tcccagtgaa caccagcgcc
      721 cggggcgtcc acacggctgg gcaaaaatcc atagcgaaac cgcgcacggc gcgatcaatc
      781 tggaatggca cggacgcagc cgcaccctga tttgccgcgt ggtgacaaag cttggcaata
      841 agccgaactc aatcattggc gattttgtcg attatctcct ggcgcggcat caaagccgta
      901 ttcttgccgt tcacatcatg cgccgatgaa ttggacgctg tgcgctttgc cgcctcgtta
      961 ggcgtcaatc actctaccgt cacgctcttg gcaagattgc gcggtttatc gacgtcgcga
     1021 ccgagtgcga cagcaacatg atacgccaga agctggagtg ggatgaccgc gagaatcggc
     1081 atcacgtaat caggcgcttc cggcagaacg atgacctcgc tagcgatacc tttcagatgt
     1141 ttcatgcagt tgccacttgt cactgcgatg atcggtccct tgcgagcttt cacttgctca
     1201 atgttgttca ggttttttga aaaaaccgaa tcatcaggtg caatgaagac cgagggcaaa
     1261 tcgggtcgga tcagcgcaat gataccgtgc ttgagctccg cgctcggatg gccttcggca
     1321 aaaaggtacg tgatctcctt catcttgagc gcgccttcga gagcaagcgg gaaattgaac
     1381 tgccggccga aaaacaggaa accattcgca ttcgcatatc tgccagcgat ttccttgatg
     1441 tgatcgttca gctctaaaac cgtttcaatc tgttcgggca acgcctgtag cgctccgatc
     1501 acgcgggtcc cctccgccgt cgcgagattt cgcatgcgtc cgaagagcaa tgcgagcagc
     1561 gtgaggatag tgagttgtga ggtaaacgat ttggtggccg ccacgccaat ctccggtccc
     1621 gcgtgcatgt aaacgccgcc atcgctttca cgcgcgatcg tgcttgcgac gttgttgcaa
     1681 attccaaggc tccgaaagcc tttgcgccgg ctctcgcgca acgcgccgag cgtgtccgca
     1741 gtttcgccgc tctggctgat ggcgaagact agcgtctcgg gcgtcatcgg cgtgttgcga
     1801 tggcgaaact cgctggcgta atccacttca gttgggatgc tcgccatgcg ctcaatcaaa
     1861 tattcgccga ctcttgccgc gtgtagtgcg gtgccacatc cggtgagaac gattcgcccg
     1921 acatcgcgca attgcggggc cgccatgttc aggccgccca attttgccgt ggattcttca
     1981 gtgttgaggc gcccgcgcat cgcgtctcga accgtgtccg gttgctcaaa gatttccttg
     2041 agcatgtaat ggggataatc acctttgccg acatcttcgg cagtgaaatc gactttgctg
     2101 accggatgct cggtgctgtc gccggcaagc gaactaatct cgaatttatc gggtccagcg
     2161 gcgacaacat cgaagtcatt taaataaact gcgtcgcgcg tgtaagcgac gattgcgctt
     2221 acatcactgg ccagaaaatt ttcaccgttt cctactccga gcacgagcgg actgccgcgg
     2281 cgcgcgccga tcatgaaatc cggcacatct gcgtgaatca gagcgatgcc gtacgtgccg
     2341 atcacttgcc gaagtgcagc gcgaacagca tcgaaaagcc tggccttctt tccgggcgcg
     2401 tccatcgtgc tggcgcacga atcatcgtac aatttcccga tcagatgcgc gagcacctcc
     2461 gtatcagtgt cggaacgaaa cttcgtatcg ccactacgaa cgagctcatc cttaagcgcc
     2521 tgataatttt cgatgacgcc attgtgaacc agcgccagct ttccgcttgc gtcaaaatgg
     2581 ggatgcgcgt tttcgtcatt cacactgcca tgcgtcgccc agcgcgtatg gctgatgcct
     2641 aacgaacccg acaccggttg ctttttgact aatttcgtga gcgcggaaat gcgtcccgcg
     2701 catttg
//
LOCUS       DATDAJ010000028         4244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_125867, whole genome shotgun sequence.
ACCESSION   DATDAJ010000028 DATDAJ010000000
VERSION     DATDAJ010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125867"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VIS53_00635"
     CDS             complement(<1..279)
                     /locus_tag="VIS53_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766317.1"
                     /translation="MNGFSWSRFAQRSGYSGLLLATFTTSPAAFAEIKASDCERAAKY
                     SESRRGSAVLVMQNGRTIFEHYANDGSANRRWPIFSGTKSFWGIAALAA"
     gene            complement(312..953)
                     /gene="scpB"
                     /locus_tag="VIS53_00640"
     CDS             complement(312..953)
                     /gene="scpB"
                     /locus_tag="VIS53_00640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEY5766318.1"
                     /translation="MKLQNIIEALLFSAQKPLSIQEITAAIKGAESDRASETPNEFAR
                     VKNAEVAAALEQLKVEYIQQSRAFQLVEKAEGWQLATDPGFAKWVRQLFPAPKPARLS
                     APALETLAIIAYRQPITRADVEAVRGVNIDGVLQTLMERGLVKIAGRAEIPGRPLLYE
                     TTQFFLDHFGLRNLDELPNAEELRRRYLPVAQPVAGIDDAGKPGSSPPAATNL"
     gene            complement(1077..2459)
                     /gene="glmM"
                     /locus_tag="VIS53_00645"
     CDS             complement(1077..2459)
                     /gene="glmM"
                     /locus_tag="VIS53_00645"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEY5766319.1"
                     /translation="MTERKKIFGTDGVRGVANVEPVTAETALKLGRAAAFVFAQMNPR
                     RTPDGARPKIVLGKDTRLSGYMLENALVAGITSLGVDVLVIGPLPTPGVAYITRSLRA
                     DAGIVLSASHNAYQDNGIKFFRHDGYKLDDQIEEKIENLVFTGEIDSMRPTANKVGRA
                     TRIDDALGRYVEFVKASFPKGMSLEEMRVAVDVGNGAAYKSTPCVLRELGAEVAVAHN
                     EPNGININDGCGSMHPEEIQRAVHISGADVGISHDGDADRVLLCDEDGEIVDGDEILA
                     IAALDFLKTGRLEQNTVVATVMSNFGLDEALAARGGKVVRTKVGDRYVIEEMVRQKLN
                     LGGEQSGHVIFRDFTTTGDGIITALQILRVMHKTGQPLSKLKACLQKYPQAQRDLAVK
                     EKRPLAELDSVMKLVTEAEKELSGKGRVLLRYSGTEQKIRLLIEGREIEMIDKQADRI
                     ADAIQTAIGA"
     gene            2585..3352
                     /locus_tag="VIS53_00650"
     CDS             2585..3352
                     /locus_tag="VIS53_00650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5766320.1"
                     /translation="MPAVEDGALRRAIGQITQGGAVGFATTHWSVVLTAQGESPEADK
                     ALEKLCRTYWWPIYSFIRRQGAEPEEAKDLTQSFFALLFERRDLEAVRREKGRLRSFF
                     FASLKNFLAKERRYAATAKRGEGRAVIPLDELLARKRADLEPADTLSADRIFERRWAL
                     TVLDQVLARLEDEYRVAGNAALFEQLKKLLTDDDQRPSQAQIGHQFEMTENAVNQAFY
                     RLRVRYRELLHEEIAHTVIAPDDTEDELRHLIAVLRA"
     gene            3408..>4244
                     /locus_tag="VIS53_00655"
     CDS             3408..>4244
                     /locus_tag="VIS53_00655"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5766321.1"
                     /translation="MKTANRFCGKCGAEFFSDGPQEFCSACLLETGLFANEPVAGSLA
                     KDFGAGDPSVVAAYSAESAAKADDQTQQARALKKVTDFGDYELLEKMGGGGQGLVYRA
                     RQKSLNRMVALKIIGLGQLATKTHLKRFHVEAEATASLDHPCIVPIFEIGEREGSCYF
                     SMKFIEGGQLDEVVRREPMSIRRAAELIAKVAHTVDYAHEHHILHRDIKPGNILLDAE
                     GEPHLTDFGLARLVETESTVTRTMEVLGTPSYMAPEQAVGNNAQITRATDVYGLGAVF
                     YQL"
BASE COUNT          933 a         1218 c         1153 g          940 t
ORIGIN      
        1 agccgcgagc gctgcaattc cccaaaaact ttttgtgccg ctaaagatcg gccaccgtct
       61 gtttgcggat ccatcgtttg cgtaatgctc gaaaattgtc cggccatttt gcatcaccag
      121 caccgcactg ccacgcctgc tctcggagta ttttgcggca cgctcgcaat ccgaagcttt
      181 gatttcggca aaggcagccg gcgacgttgt aaacgtggca agcaacaatc cgctgtagcc
      241 gcttcgctgt gcgaagcgtg accacgagaa gccattcata cgcagatcgc gcccgcccca
      301 tagggcgacg gctacagatt cgttgcagcc ggaggcgatg agcctggctt gccggcatca
      361 tcgatgccgg ctacaggttg cgccaccggc aaataacgtc tccgcaactc ttccgcgttt
      421 ggcaattcgt cgagattgcg cagaccgaag tgatcgagaa aaaattgtgt cgtttcgtaa
      481 aggagcggcc gccccgggat ttcggcgcgt ccggcgattt tcaccagacc gcgctccatc
      541 aaggtttgca gcacgccatc gatgttcacg ccgcgcacgg cttctacgtc cgcgcgggta
      601 atcggctgac gatacgcaat gattgccaac gtctccagcg caggcgcact caaacgagcc
      661 ggttttggag ccgggaaaag ctgccggacc cactttgcaa agccggggtc ggtagcaagt
      721 tgccagcctt ctgctttctc gaccagttga aacgcgcggc tctgctgaat gtattccacc
      781 tttagttgtt cgagtgctgc ggcaacttca gcatttttga cgcgcgcaaa ctcgttaggc
      841 gtctcactcg cccgatcgct ttcggcccct ttgatcgcag cagtgatttc ttgaatagag
      901 agcggttttt gcgcgctgaa cagaagcgct tcgataatgt tctgcaattt cataaataaa
      961 gcgggtcatc ctgagcgcgg cgaaggacct ctcgctcaaa caattcggca agactgaacg
     1021 acagctgatc catggtcatt tgtgaggtcc ctcacttcgt tcgggatgac agggcattac
     1081 gctccgatcg ccgtttgaat cgcgtccgcg atccggtctg cttgtttgtc gatcatttca
     1141 atctcgcgcc cttcaatgag tagacgaatc ttttgctcgg tgccggaata acgcaggagc
     1201 acacggcctt tgccggacaa ctctttctcg gcctctgtta ccaacttcat cacagaatcc
     1261 agctccgcca gcggacgctt ctctttcacc gccagatcgc gctgggcctg cggatacttt
     1321 tgcaaacacg ccttgagttt gctcaatggc tggccggttt tgtgcatgac ccgcaaaatc
     1381 tggagcgcgg taatgatgcc gtcgcctgtc gtggtgaagt cacgaaaaat gacgtgacca
     1441 ctctgttcgc caccgagatt cagtttttgc cgcaccattt cttcaatgac ataacgatcg
     1501 ccgactttcg tccgcacgac tttgccgccg cgcgccgcga gcgcttcatc cagaccgaag
     1561 ttgctcatga ccgttgccac gacagtgttt tgctccagcc ggccagtttt caaaaaatcc
     1621 aaggccgcga tcgcgaggat ttcatcgcca tcgacaatct cgccgtcctc atcgcaaaga
     1681 agaacgcgat cagcatcgcc gtcgtgacta atgccgacat ccgcgccgct gatatggaca
     1741 gctcgctgga tttcctccgg atgcatgctg ccgcagccgt cgttgatatt aatcccattc
     1801 ggctcattgt gcgccacggc aacctccgca cctaactccc gcagaacgca cggcgtcgat
     1861 ttatacgcgg cgccattccc gacatccact gcgacgcgca tttcctcgag cgacattccc
     1921 ttggggaaac tcgctttgac gaattccacg taacggccga gcgcgtcatc gattcgtgtg
     1981 gctcgaccga ctttgttggc ggtcggccgc atggaatcaa tttctccggt gaaaacgagg
     2041 ttctcgattt tttcctcgat ctgatcatcc aacttgtaac cgtcgtgccg gaagaatttg
     2101 atgccgttgt cctgataagc gttatgcgac gcggacagaa cgatgccagc atcagcgcgc
     2161 agcgatcggg tgatgtacgc tacgcccggc gtcggtaacg gcccaatcac cagaacatcc
     2221 acgccaagcg aagtgattcc ggccaccagc gcgttttcca gcatgtaacc cgaaagacgt
     2281 gtgtctttcc cgagcacgat tttgggccgc gcgccgtcag gcgtcctgcg cggattcatt
     2341 tgcgcgaaca caaacgccgc agcgcgtcca agtttcagcg ccgtctccgc cgtcaccggc
     2401 tcgacgtttg cgacgccgcg cactccatcc gtgccaaaga ttttcttccg ctcggtcacg
     2461 ggctaattga aacgctcaaa gcgcgattcg taaacgcgaa agtttgaaag caccaaggag
     2521 ccgtccctcc ttgtagacgg agtccaggct tgatttgcgc gcgacttttt agttggatcg
     2581 cagcgtgcct gcggttgaag acggggcgtt gcggagggcg attggtcaaa tcactcaagg
     2641 cggtgctgta ggatttgcca ccacgcattg gagtgtcgtc ctcaccgcgc agggcgaatc
     2701 gccagaggcg gacaaagcac ttgagaaact ttgccgcact tactggtggc ccatttacag
     2761 ttttatcagg cgacaaggcg cagagccaga agaggcgaaa gacctcacgc aaagtttctt
     2821 cgcgctgcta tttgaacgca gagatctgga agccgtccgc cgcgagaagg gacgtttacg
     2881 ttcctttttc tttgcctcgc tcaaaaattt cctggctaag gaacgccgtt atgctgcgac
     2941 cgctaagcgc ggtgaaggtc gggcggttat accactggac gaattgctcg cgcgcaagcg
     3001 cgctgatctt gagccagcgg acaccttgag cgccgatcga atcttcgagc gtcgctgggc
     3061 attgacagtt ttggaccaag tgctcgcgcg attagaagat gagtaccgtg tggctggcaa
     3121 tgctgccctg tttgagcagt taaagaaatt gctcaccgac gacgaccaac gcccttctca
     3181 agcgcagatt gggcatcaat tcgaaatgac tgaaaacgct gtgaaccaag ccttctatcg
     3241 actgcgcgtg cgttatcggg aattgttgca cgaagaaatc gctcacacgg tgatcgcacc
     3301 ggacgacaca gaagatgagc tacgccattt gattgccgtc ttgcgcgcat aacttcagcg
     3361 agaatttccc agattactct attgaatggt tgggtgatca aaggagggtg aaaaccgcga
     3421 atagattctg tggaaaatgc ggtgcggaat tcttctcgga cggtccgcag gaattttgta
     3481 gcgcatgcct gttagaaacc ggtctgttcg caaatgaacc tgtagccggc tcgctcgcga
     3541 aggatttcgg agctggcgac ccgtccgtcg tagctgccta ctccgccgaa tcggctgcga
     3601 aggcggatga ccagactcaa caagcgcgcg ctctcaagaa agtaaccgac tttggagact
     3661 acgaactcct ggaaaaaatg ggcggtggcg gtcaaggcct tgtctatcga gcgcggcaga
     3721 agagtctcaa tcgcatggtc gcattgaaaa ttatcggtct gggccagtta gcgacgaaaa
     3781 cgcatctgaa acgtttccat gtcgaagccg aagcgacagc cagtctagac catccctgca
     3841 tcgttcctat cttcgaaatc ggagagcgcg aaggctcatg ttacttcagc atgaaattca
     3901 tcgagggcgg gcagctcgat gaagtggtca ggcgcgagcc gatgtcaatc cggcgcgcgg
     3961 cggaattaat cgccaaagtg gcgcacaccg ttgattacgc ccacgaacac cacattctgc
     4021 atcgagacat caaacccgga aacattctgc tggacgcaga aggcgaaccg catctcaccg
     4081 atttcgggct ggcccggctg gtcgagacag agagtaccgt cacgcgcaca atggaagttt
     4141 tgggcacgcc cagttacatg gcgccagaac aagcggtggg aaacaatgcc cagatcacga
     4201 gggctacgga tgtttacggg cttggcgcgg tgttttacca actg
//
LOCUS       DATDAJ010000029         3580 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_129249, whole genome shotgun sequence.
ACCESSION   DATDAJ010000029 DATDAJ010000000
VERSION     DATDAJ010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129249"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            571..2541
                     /locus_tag="VIS53_00660"
     CDS             571..2541
                     /locus_tag="VIS53_00660"
                     /EC_number="5.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEY5766322.1"
                     /translation="MTADLADLNARIKQSVAHGQLIESSAKNIRTLLEGAGSDVYFRS
                     VKELVHAAEWQELNDRFYQTLAFGTGGLRGRTIGKIVPTAERGNSHEGERPEFPCVGT
                     NAMNFFNINRATRGLVAYLQDWSLRQGISTKPKLVIAHDPRFFSKEFAELAAKVAAEN
                     ACDAFVFDGPRSVPELSFAVRYLRANAGIVITASHNPPHDNGYKVYFNDGAQVIDPHA
                     IGIIARVNAITTESFTPLPKEQQGKVTVIGKNIDQAYMHRLETLILDPRVIREAKSLR
                     IVYTPLHGTGSVIIRPMLNRLGFKFQVVPEQDCFDGGFSTVKSPNPEYGEALTMAMNL
                     AERENADLVVATDPDCDRMGVAVRTRDGKMKLLTGNQIGSLLAWYRIKTLFDKGVLNK
                     PNAARAVIIKTFVTTDLQNAIADHFGVRCVETLTGFKYIGAKLADYEREIPEQLRRSY
                     ADLAESETRRLRLAYSSFYVFGGEESYGYSGADFVRDKDGNGAVIMFCEVAAYAKSRG
                     QTVDQLLDEIYSQFGYFAEKTSSLVFEGAEGANKIASLMKSYTTDPIREIHRLKVANF
                     KNFETDEIRDVEGDPIPKTKMLMLELEDGTRIAVRPSGTEPKIKYYLFARRRPESEKF
                     TGAELDRIKAEVEEHLENLWSWLRTGAESRLR"
     gene            2756..>3580
                     /locus_tag="VIS53_00665"
     CDS             2756..>3580
                     /locus_tag="VIS53_00665"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766323.1"
                     /translation="MKRMTKLWPWLAAICSGLLYAACFAPFNLTWFCWIALTPLIAAI
                     WFSGGESRHPWFRNLLLGYVAGLMFFWVVFSWLTTVTVLGWFVLQFYMAIYFAIWAWF
                     CGLLRPRTGKRQSRAASKWGQMLAQARTTATPAPSPWTKSTNNLRLAFILAAAWTTHE
                     WLRGWVFSGFGWNGLGVALHGNWPLIQITELTGVAGLSFMVAFVNVIVLTTVYRLVVE
                     ARTRVMRPHFDFTITMAAIVGVLIFGLRAAQISSPTKPLRVAAVQSNVPQNQKFDPQ"
BASE COUNT          862 a          905 c         1007 g          806 t
ORIGIN      
        1 aaagcccggc tagtcattcg aacagaacgg cgcgtaccca cacgaccagc aggaaaacga
       61 tgacaagtcc gccgcctaac aaccagcgaa ggtcgggtac gatcgtgccg ctcgaagcag
      121 gtcaatggaa tagctagcaa tgcctgcagg cttgtcactt aagttgtaac ctcgttggtc
      181 tggtatgatc aggcgatatc cggaggagac gaagtgatca atttggtgcc gccacgcgaa
      241 ccagaactcg ggaaaaccgt ggaggaatac taaaggttta ccgcttgcag gcccggcaag
      301 aacgacgtgt agcgcaatgc cattaatgtg gaaaaagcga aattcgagag gcgagcggat
      361 gcctgataac gtcataaggc gagtcagcga gtaatttttc cacgtcagag ccattacagc
      421 caagactctt ggatggccaa gtgcgagata aaatgtctga ccgttcaact cctttgcagc
      481 tccatactga accgaaataa atgacgcaag tgtttccggt tcgccacaga gtgcttgcaa
      541 agccaatcca tcacggaaca gttgccggaa atgacagctg atcttgcaga cctaaatgcg
      601 aggatcaaac agtccgttgc tcacgggcaa ctgatcgaat catcggcaaa gaatattcgg
      661 acactgctcg aaggcgcagg gtcagacgtc tattttcgat cggttaagga actcgtccat
      721 gccgctgagt ggcaggaact aaacgaccgg ttttaccaga ctcttgcatt tggaacgggt
      781 ggcttgcgcg gccgcaccat tggcaaaatc gtgccgacgg cggaacgcgg aaattcgcac
      841 gaaggcgagc gaccggaatt cccgtgcgtc ggcacgaatg cgatgaattt ctttaacatc
      901 aaccgcgcaa cccggggact tgttgcttac ctgcaggact ggagcttgcg ccagggaatt
      961 tcgacgaagc caaaactcgt gatcgcgcat gatccgcgat ttttctcgaa agagttcgcc
     1021 gagttggcgg cgaaagtcgc agcggaaaat gcttgcgatg cttttgtgtt cgatggtccg
     1081 cgttctgtcc cagagctttc gtttgccgtt cgttatttgc gcgcgaacgc agggatcgta
     1141 atcaccgcca gccacaaccc gccgcacgac aacgggtaca aagtttattt taacgacggc
     1201 gcgcaggtga tcgatccaca cgccatcgga atcatcgcca gagtgaacgc gattactacc
     1261 gagtcgttta cgccgctccc taaagagcaa caaggaaaag tgacggttat cggaaagaat
     1321 atcgaccagg cttacatgca ccggctcgaa acgttgatcc tcgatccgcg agttattcgc
     1381 gaggcgaaat cgctgcggat tgtttacacg ccattgcacg gaaccggcag cgtaatcatc
     1441 agaccaatgc tgaaccggct cggtttcaag ttccaagtcg tgccggagca ggattgtttc
     1501 gatggcgggt tttcaacggt gaagtcgccg aatccggaat acggcgaagc gttaaccatg
     1561 gcgatgaatc ttgctgaaag agagaacgcc gatttggtcg ttgctactga cccggactgc
     1621 gatcgtatgg gagtggccgt tcgaaccagg gatggcaaga tgaaattgct gaccggaaac
     1681 caaatcggtt cgctgctggc gtggtataga atcaagacgc tgttcgacaa aggcgtgcta
     1741 aacaagccaa acgcagcgcg cgccgtgatc atcaaaactt tcgtgaccac cgatctgcaa
     1801 aacgcgatcg ccgatcattt cggcgtccga tgtgtagaaa cgttgacggg ttttaagtac
     1861 atcggtgcga agctggcaga ttacgagcgt gagattcccg aacaactgcg acggagttat
     1921 gctgatcttg ctgaaagcga aacgcggcgg cttcggctcg catactcttc attttacgtt
     1981 ttcggcggcg aagaaagcta cggttacagc ggcgctgatt ttgttcgcga caaagacggg
     2041 aacggcgcag taatcatgtt ttgtgaagta gccgcttacg cgaaatcgcg tggacaaacg
     2101 gtcgatcagt tactcgacga aatttattcg cagttcggct attttgcgga gaaaaccagt
     2161 tcgcttgttt tcgagggcgc agagggagca aacaagatcg ccagtctgat gaagtcatac
     2221 acgaccgatc cgatccgcga aatacaccgc ctgaaagtgg cgaactttaa aaatttcgag
     2281 acggatgaga tcagagacgt cgaaggcgat ccgattccaa agacgaaaat gttgatgctt
     2341 gagctggaag acggcacgcg tatcgctgtg cgcccgtcag gcacagagcc aaaaataaag
     2401 tattaccttt ttgcgcgccg ccggccagaa agtgagaaat ttaccggcgc agagctcgac
     2461 cgaatcaaag cggaagttga agaacacttg gagaatctct ggagttggct gcgaacgggt
     2521 gccgagtctc ggctgcgata gtctgagctc ccaactcgaa gccctagaca tgcgattgtc
     2581 atcctgagcg gagcgaagga tctctgggat cgcaaatgga acctgagatg tttcgcttcg
     2641 ctcaacatga cagtgtaaca gtgcgaaatg gagacttggt cttttgggat ttgaagtttc
     2701 tttggagctt ggatgttgga atttggagcc tgcgaccctg gtatgagcgc actcgatgaa
     2761 aagaatgaca aagctttggc catggttggc cgcaatctgt agcgggcttc tttacgcggc
     2821 ttgttttgcg ccgtttaacc tgacgtggtt ctgctggatc gcgctgaccc cgcttatcgc
     2881 cgcaatttgg ttttccggcg gggagtcgcg tcatccgtgg tttcgaaact tgcttctcgg
     2941 ttacgtcgcc ggcctgatgt tcttctgggt cgtattctcc tggctcacga cggtcaccgt
     3001 tctcggttgg tttgtccttc agttttacat ggcgatttat ttcgcgattt gggcgtggtt
     3061 ttgcggtctg ctgcggccac gaacaggcaa gaggcaatca cgcgccgcta gcaaatgggg
     3121 ccagatgctc gcccaagccc gaaccacggc cactcccgcg ccatcgccct ggacaaaatc
     3181 gacaaacaac ctgcgactcg ctttcatcct cgcggcagca tggaccacac atgaatggtt
     3241 gcgcggctgg gttttctcgg ggttcggctg gaacggcctc ggtgtcgcgc tacacggtaa
     3301 ttggccattg attcaaatca cagagctcac cggcgttgca gggttgtcgt tcatggttgc
     3361 gtttgtcaac gtgatcgttc tcacgaccgt gtatcgactg gttgtagagg cgcggacacg
     3421 ggtgatgcga ccccattttg atttcactat caccatggcg gctattgtag gcgttttgat
     3481 tttcggactc cgtgcggccc agatttcgtc gcccacaaaa ccgcttcgcg ttgccgcggt
     3541 gcagtcgaac gttccgcaaa atcaaaagtt cgatccgcag
//
LOCUS       DATDAJ010000030         8347 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_151731, whole genome shotgun sequence.
ACCESSION   DATDAJ010000030 DATDAJ010000000
VERSION     DATDAJ010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8347)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8347
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151731"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1115)
                     /locus_tag="VIS53_00670"
     CDS             complement(90..1115)
                     /locus_tag="VIS53_00670"
                     /inference="COORDINATES: protein motif:HMM:NF013661.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan recognition family protein"
                     /protein_id="HEY5766324.1"
                     /translation="MLRFRIWVATALAFGALVGGLIRAQVNEEKQRDQSEETETRAAS
                     TPKPKKSPTPKTKRHHTPTPKPKTAKKKSSTKKSAKSKSALKEETPKSRKTPAPQVEE
                     ERAASEPGAPPPRAIAVPTPTPSPQTKAARTFSAGGQAQVVIEKSGIEEDQGFEPPPS
                     PPPRRGFWPWRRPVSYRYLTSSVIDAIRRAPVKRRRWQFIVVHNSGTRQGNARVFDYY
                     HKHVRRMQNGLAYHFVIGNGTSTGNGQIEVGDRWRRQINGGHVHSDYLNNISLGICLV
                     GDFNRDQPTRAQLDACEELIRYLRDRCGKTERGTIPVKPHREINPPRWATDCPGDDFP
                     YSWFRKF"
     gene            complement(1229..2137)
                     /locus_tag="VIS53_00675"
     CDS             complement(1229..2137)
                     /locus_tag="VIS53_00675"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY5766325.1"
                     /translation="MKYLRLIWRVTRRLVWETAMDNTTGLAAQMAYVLLFALAPGTLF
                     LWHLLGLFGTDPTKLHRMYLLLRSFMPPDPKVQDILDSAIASVVVTGTSGLLANAGIL
                     LGIYFGTVFIATVSRALSHMHGVQEDRHWWSKYIISFFMLFWFGIVIVFSFNAVVFGE
                     KLAGIAEVNWQLSFPLQAWIAGLNLPLTAVALVGLALAFYLLTPENYLTVRQALPGAI
                     FFAVGWIIATKLFQLYVARYDRYNPTYLALASIIVLLTWMYLTCLLLLLGGKLNAIIR
                     RERKKMRVAQPVAPSPAAPLASSTNT"
     gene            2251..3339
                     /locus_tag="VIS53_00680"
     CDS             2251..3339
                     /locus_tag="VIS53_00680"
                     /inference="COORDINATES: protein motif:HMM:NF018613.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766326.1"
                     /translation="MKKKILILTAGFGEGHNSAARGVRDGLARVASDQTIVELRDLFA
                     EAYGPINELVRRSYLALVNSAPRAWGFVYRWLDRKTDYSTEFRRLTRLKAQFGPVLNR
                     FKPDIVVCSFPAYANVLQDILGAGRVCKCVVVVTDSITINASWYRSPADYFLVANEQS
                     ASVLRSGGVAPEKIRIFGFPVSPKFADLTADRPLPSTNSNRRVLYTITVAKRGAAELV
                     RMLAKLDLDLTVTIGRADELRADINAAADGHPIKIVGWTNELPRMMHENHLLIGKAGG
                     ATVQETIAAKCPMIINHVVAGQEEGNARLIVETNSGVMAQSPREVVAQVQRAFDDGAK
                     QWREWAGNISKLSRPRAALDIAEFLMSL"
     gene            complement(3484..4656)
                     /gene="nagA"
                     /locus_tag="VIS53_00685"
     CDS             complement(3484..4656)
                     /gene="nagA"
                     /locus_tag="VIS53_00685"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008448 - N-acetylglucosamine-6-phosphate
                     deacetylase activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEY5766327.1"
                     /translation="MIFTNTRLIFPDGIRDGLEVILQEGRIAAIQPPTPKLRRTGERV
                     RENEILDLNGNYLAPGFIDLHVHGALGRDTMEASAEAFRSICEFHASGGTTSLLLTTA
                     TAPLNEIVKVLQTVCDFRSAISLIVGVHVEGPFISKAKAGAQRAEFIQDPSPGAVRQL
                     LEHTDLLKRVTIAPELPGALEAIEIFHAHGISVSGGHSDAWDEDARAAFNRGMQSVTH
                     TFNCMSRARRRGIYRVAGLLEFALSEPDISCELIADGHHVSPTLMKMLYRAKGAKGIC
                     LVTDATAGAGLPEGSQFALFGKDCIVENGVSLLADRSALAGSAARMIDLVRMMVREVN
                     VPLNEAIAMATENPARAIGLETKGRFIVGADADLVVLSPEIEVVRTFRCGEQIWSH"
     gene            4804..6378
                     /locus_tag="VIS53_00690"
     CDS             4804..6378
                     /locus_tag="VIS53_00690"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5766328.1"
                     /translation="MNFDYDVVIIGGAFSGAATALMLKRKRPEARVLIIEKGAAFDRK
                     VGESTTEVSSCYMTRILGLTHYLGHHQLPKQGLRLWFSNRNDQPFDDCVEIGTRYQSR
                     LPGFQVDRAKLDSHLLELARNAGCDLWRPAKVTSFELNGGQGQKINAVVDDTQRGASC
                     RWIVDATGRAAMFARKLGYFRPNTEHPINAVWARFSGVKEWDSYEWRERFPDYVNGCR
                     TGREWATNHLFGRGWWVWIIPLQGGDVSAGIVYDSRIFKFPEGPTLGQRLHAHILNNP
                     VGREIFGAAKVIEGDVHALSLLPYHSEKVCDDGWAIVGDAAGFIDPLYSPGLDFCSYT
                     SYYVADLLARSLKGEDVTERLHHYNQQFPVTYRFWFESLYKDKYYYMGDADLTSAALL
                     LDVSSYYIGLVRPVYRDPECAFLNLPFTGKGGRFARNVMNFYNRRLVALANRRWETGY
                     YGKRNAGWRELYDGFVPDTRLRKQILRGLRRWCKCELINLVLMLRGPSAAVAGAVEPG
                     NVSTANASTGAGSSAL"
     gene            complement(6420..7514)
                     /locus_tag="VIS53_00695"
     CDS             complement(6420..7514)
                     /locus_tag="VIS53_00695"
                     /inference="COORDINATES: protein motif:HMM:NF018460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEY5766329.1"
                     /translation="MQHSIQNLLFSAFAFVLGAAVGSFLNVCIYRWPVDLSINRPRRS
                     FCPQCKQPIPWHHNLPLISWLALGGRCANCGAKISFRYLAVELVTALLFLAMWQRFPS
                     QVAIAYWIFVSFLIIGTFIDFEHFIIPDRVTIGGTIAGVACSIVVPALMQTNSRVAAG
                     VRAALAAALGYVILWIVLEVGKIAFGRKRIEFDAPTTFTWTKRDDDADFVVGIEESLW
                     SEYFAREKDRLLLQCDEVRIDDREYGNVTLDFRYDRVNADGDVLMLDDVTHISGVTRK
                     LVIPREAMGRGDLKFLAAIGAFLGWRAVLFSLFAGSLLGSVIGLVTLVVGKPVWSAKL
                     PFGPYLAFGALTWMFFGETVLRWYGTLLSP"
     gene            complement(7519..8301)
                     /gene="tatC"
                     /locus_tag="VIS53_00700"
     CDS             complement(7519..8301)
                     /gene="tatC"
                     /locus_tag="VIS53_00700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY5766330.1"
                     /translation="MALRDIFKFRDPPETETSKPFLEHLEDLRWTIVKMALTLGIAMI
                     VCFAFRSTLVRIIQAPLNHLGSQVGTLKALGITDSIVISFHLAFYAGIVLSFPLLLYF
                     LAEFVLPALTALEKRFIFPAIAGSFALFLIGVLVCYFWLLPKTILFFFRDTQSLGWAP
                     TWTVQQYYSFVTRFTIGFGLAFELPVVVLALVRFGLITYRFMARTRPYAVVLIFILAT
                     IITPTPDILTLIAMALPMCLLYESCIWIAFLMERRASKRIAG"
BASE COUNT         1966 a         2310 c         2307 g         1764 t
ORIGIN      
        1 aaactccagt aaatcgcccg catagcgtag cgtatcggcg ccgcaccagg cgcaaattcg
       61 tttactcgag acgggtcgta aactctctgt cagaatttgc ggaaccacga ataaggaaaa
      121 tcgtcgcccg ggcaatccgt ggcccagcgc ggtgggttga tttcgcggtg aggcttcacc
      181 ggtatcgtac ctctctcggt tttgccgcag cggtctcgca gatagcgaat gagctcctca
      241 catgcgtcga gctgtgcacg cgtcggctgg tctcgattga aatcgcctac gagacagatg
      301 ccgagcgaga tgttgttcag ataatcgctg tgcacatgac cgccgtttat ctggcgccgc
      361 catcgatcgc cgacttcgat ttggccgttg ccggttgatg tgccgttccc gataacgaag
      421 tgataggcga gaccgttctg catgcggcga acatgcttgt ggtaataatc aaacacacgc
      481 gcattgccct gccgcgtgcc gctgttgtgc acgacaatga actgccagcg acgccgtttc
      541 accggcgcgc gccggatcgc atcgatcacc gaacttgtta ggtaacggta gctgactgga
      601 cgtctccacg gccagaaacc tcggcgtggc ggcggcgacg gcggaggctc gaatccctgg
      661 tcctcctcaa tgcctgattt ttcgatcaca acctgagcct gtccgcccgc tgaaaaggtg
      721 cgcgcggctt tagtctgtgg cgaaggcgtt ggcgttggca ctgcaatcgc acgtggcggc
      781 ggcgctccgg gttcggacgc ggcgcgttct tcttctactt gcggcgccgg cgtttttcgt
      841 gacttaggcg tctcctcttt taatgccgac ttcgatttcg cacttttctt cgtgctggat
      901 ttcttcttcg cggtttttgg tttcggtgtt ggggtgtggt gtcgctttgt tttcggcgtt
      961 ggagatttct tcggtttcgg agtggatgcg gcgcgtgtct cggtttcctc cgattgatcg
     1021 cgctgttttt cttcattgac ctgcgcgcga ataagacccc cgaccaatgc gccaaatgcg
     1081 agcgcagttg caacccaaat gcgaaagcgc aacactgcga cggagcgtaa cagagcccgc
     1141 gatgcgatca acgcttacag cagcgatttg ttaaaaaagt tacaaaccac aaagagctgc
     1201 gctttttcac cgtattatcg gctaactttt acgtattcgt cgacgaggcg agtggcgctg
     1261 caggcgaggg cgcgacaggc tgggcgacgc gcatcttctt acgctcgcgc cggatgatgg
     1321 cattcaattt acctccgagc aacaacaaca gacaagtcag atacatccac gtgagcagca
     1381 cgatgatcga cgccagcgcg agataagtcg ggttataacg atcgtatcgt gccacgtaga
     1441 gctggaaaag tttcgtcgcg atgatccagc cgaccgcaaa gaaaattgcc cccggcagcg
     1501 cctgacgaac cgtcaaataa ttttccggtg tgagaagata aaacgcaagc gcgagcccga
     1561 ccagcgccac ggcggtcaac ggcagattca accctgcaat ccacgcctgg agcggaaacg
     1621 agagttgcca atttacctct gcgatgccgg ccagcttttc gccgaaaaca acggcgttaa
     1681 agctaaacac gatgacaatc ccaaaccaga aaagcatgaa gaatgagatg atgtatttgg
     1741 accaccagtg gcgatcttcc tggactccgt gcatgtggct gagtgcgcgt gaaacggtgg
     1801 cgatgaaaac ggtcccgaaa taaattccaa ggaggatgcc ggcgttcgcc agcagtccgc
     1861 tcgtgcctgt caccacgacg ctcgcaatgg cagagtccag aatgtcctgc acttttggat
     1921 ccggtggcat gaaactccgc aagagaagat acatccgatg caacttggtg ggatcagtgc
     1981 cgaacagacc cagcagatgc cagagaaaca gtgtaccggg agccagcgcg aaaagaagca
     2041 cgtacgccat ctgcgcagcc agcccggtcg tgttgtccat cgctgtttcc caaaccagcc
     2101 ggcgcgtaac acgccaaatc aatctgagat atttcatctc cgcaggagtt tactttgccg
     2161 ggcacaaata tccattaaag tccaaatgct tttgcgagtg attaccctct gcgtgtgtcc
     2221 tcgatcgtag taaatgtcgc ctgacgactg atgaagaaga aaatattgat tctcacggcc
     2281 ggtttcggag agggtcataa cagtgccgcc agaggagtgc gcgacgggct ggcccgcgtc
     2341 gcttcggatc agacaatcgt ggaattgcgg gatctgtttg ccgaagccta cgggccgatc
     2401 aacgaactgg tccgccgaag ctatcttgcg ctggtgaatt ctgcgccacg cgcctggggg
     2461 ttcgtttacc gctggctcga tcgcaagaca gattacagca cggaatttcg ccgattgacc
     2521 aggctgaagg cgcagtttgg tcccgtgctt aaccgtttta agccggacat cgtcgtctgc
     2581 tcttttcccg cctacgccaa tgtgcttcag gacattttgg gagccgggag agtctgcaaa
     2641 tgtgtggtgg ttgtcacgga ctcgatcacg atcaacgcat cctggtaccg gagcccggcg
     2701 gactatttcc ttgttgcgaa cgaacaaagc gccagcgtgc tgcggagtgg cggagttgcg
     2761 ccagaaaaaa tcaggatatt tggttttccc gtcagtccaa aattcgcaga tctcaccgca
     2821 gatcggccat tgccttccac taattccaat cggcgggttt tgtacacgat cactgtcgcc
     2881 aagcgcggcg cggcggaact cgtgcgtatg ctcgcgaaac ttgatctgga tcttaccgtc
     2941 acgatcggcc gcgctgatga actacgggct gacattaacg cggccgcaga tggtcacccg
     3001 ataaagatcg ttggctggac gaacgaactc cctcgcatga tgcacgagaa ccatttgctc
     3061 atcggcaaag ccggtggcgc gacggtgcag gaaacgattg ctgcaaaatg tcctatgatc
     3121 atcaaccacg tcgtagccgg tcaggaggaa ggcaatgccc ggttgatcgt cgaaacaaat
     3181 tcaggcgtga tggcccaatc gccacgagaa gttgtcgcac aggtgcagcg cgcattcgat
     3241 gacggcgcaa aacaatggcg agaatgggcc ggcaacatca gcaagctgag ccgcccgcgc
     3301 gcagcgctcg acatcgcgga atttctgatg tcgctatgac atgtctcatt aacaccgcgg
     3361 cttcagcccg gtgaagaagc agcccaacgc tgcgaaccgt ttcaacggtt tagtaaaaaa
     3421 gggaagccgt taaaatggct tgagttccgc agcgagggca cataccgggc tgaagtcagg
     3481 gtgttaatga gaccagattt gctcaccgca gcggaacgtt cgcaccactt ctatttccgg
     3541 cgaaagcaca accaaatcgg cgtccgctcc aacgataaag cgacctttcg tttcgagacc
     3601 gatagcgcgt gcgggatttt ccgtcgccat cgcaatggct tcattcaacg gaacgttcac
     3661 ctcgcgcacc atcatgcgca caaggtcgat catccgcgct gcgctgccgg ctagcgctga
     3721 acgatcagcc aggaggctga ctccgttttc tacgatgcaa tccttaccga aaagcgcgaa
     3781 ctgcgatcct tccggcaacc cggcaccagc ggttgcgtca gtaactaaac agattccttt
     3841 cgcgcctttc gcgcgataca acattttcat cagcgtcggg gaaacatgat gaccgtcggc
     3901 gatcagttca caactgatgt caggttcgct caacgcaaac tcgagcaaac cggcgacccg
     3961 ataaattccg cgacggcgcg ccctcgacat gcaattgaag gtgtgcgtca cgctttgcat
     4021 accgcgattg aatgccgccc gggcgtcttc atcccatgca tcgctatgtc cgccgctcac
     4081 gctgatccca tgagcatgga agatttcgat cgcttcaaga gctcccggca gttcgggcgc
     4141 gatcgtcaca cgcttcagca ggtccgtgtg ttcgagcaac tgccgcacag cacctggtga
     4201 cggatcctga atgaactcgg cgcgttgcgc tccggctttc gctttcgaaa tgaacggccc
     4261 ttcgacatga acaccgacaa tcagactgat cgctgatcga aaatcgcaaa ccgtctgcaa
     4321 gaccttgacg atttcgttaa gaggcgcagt cgctgtcgtg agcagaagcg atgtcgtgcc
     4381 gccactcgcg tgaaattcgc aaatagagcg aaacgcttca gccgaggctt ccatcgtgtc
     4441 gcggccaagc gcgccgtgca catgaagatc gataaaaccg ggcgcaagat aatttccatt
     4501 aagatcaagg atctcgtttt cgcgtacccg ctcgcctgtc cgccgtagct tcggcgtagg
     4561 cggttggatc gcggcgatcc ttccttcttg caggataact tcaagcccgt cgcgaattcc
     4621 atcgggaaaa atcaaccgcg tgttcgtgaa gatcatctcg tgatgcagtc aatcctgcct
     4681 gcaccgtgat ggaggctcaa tcgaaatagt cgctgcgctc gtggcaatac ctcgcagaca
     4741 ggattatctt ggtcactcga cgcgcttgct ccggagcggt ataaaggcca tccttttcga
     4801 gcgatgaatt tcgattacga cgtcgtgatc atcgggggcg cgttttcggg cgcggcaacg
     4861 gctctcatgc tgaagcgcaa acgccccgaa gcgcgtgtcc tgatcatcga aaagggggct
     4921 gcgttcgatc gtaaggtagg cgaatcgacc accgaggtga gcagttgcta catgacgcgg
     4981 atcctgggtc tgacgcatta tctcgggcat catcagttac ccaagcaggg attgcgcctc
     5041 tggttctcaa accggaatga tcaaccgttt gatgattgtg ttgagattgg cacacgttat
     5101 cagagtcgac tgcctggatt tcaagtggac cgcgcgaagc tcgattcgca cctgctcgag
     5161 ctcgcccgca acgcgggctg cgatttatgg cgccccgcca aggtcacgag ttttgaacta
     5221 aacggcggcc agggacaaaa gataaacgct gtcgtcgatg atacccagcg cggggccagt
     5281 tgccgctgga tcgtcgatgc tacgggacgc gcggcgatgt tcgcacgaaa gctaggatat
     5341 tttcgaccga ataccgaaca cccaatcaat gcggtgtggg cgcggttcag cggcgtcaaa
     5401 gaatgggaca gctacgaatg gcgcgaacgc tttcccgatt atgtgaacgg ttgtcgaact
     5461 ggacgcgagt gggccacaaa ccatcttttc ggccgcggct ggtgggtttg gatcattccg
     5521 ttgcagggtg gcgatgtcag cgccggtatc gtttacgaca gtcgcatctt caaatttcca
     5581 gagggaccga ctctgggaca acgattgcac gcgcacattc tgaacaaccc cgttggtcgc
     5641 gaaatcttcg gtgcagcaaa agtgatcgaa ggcgacgtgc acgcgctttc gctgctgccg
     5701 tatcatagcg aaaaagtttg cgatgacggt tgggcgatcg tgggcgatgc cgccggattc
     5761 atcgatccgc tttacagccc gggtctcgat ttttgttctt acacttccta ctacgtggcg
     5821 gatttactgg cgcgcagtct caaaggcgag gacgtcaccg agcgactaca tcattacaac
     5881 caacaattcc cggttactta ccgtttctgg ttcgagagtt tgtacaagga caaatactat
     5941 tacatgggcg acgcggactt aacctcagcg gcgctgcttc tcgatgtgag cagttattac
     6001 atcggcttgg ttcgaccagt ctatcgcgat ccggaatgcg cgtttcttaa cctgcccttc
     6061 actggaaaag gaggcagatt tgcccggaac gtgatgaact tttacaatcg ccggcttgtg
     6121 gctcttgcaa atcgccgatg ggaaacgggc tactacggaa aaagaaacgc cggctggcgc
     6181 gaactttacg acggattcgt tcccgacaca cgccttcgga aacaaatatt acgcggcctg
     6241 cgtcgctggt gtaagtgcga gttaatcaat ctcgttttga tgctgcgcgg gccgagtgcg
     6301 gctgtagcgg gagccgtcga gcccggtaat gtttccaccg caaatgcttc cactggcgca
     6361 ggctcttccg cgctctgata ctcctggacc ccttcgcccg gtccaggtgg ctaatggcat
     6421 catgggctga gcagcgttcc gtaccagcgc agaacggttt cgccaaaaaa catccaggtg
     6481 agtgcgccga atgccagata cggtccaaag ggtagttttg ccgaccaaac aggttttccg
     6541 acgacaagcg tgaccaagcc gattactgaa ccgagaagtg atcctgcgaa aaggctgaac
     6601 aataccgcgc gccacccaag gaatgcgccg atcgcggcaa gaaatttcag gtcaccgcgc
     6661 cccattgctt cgcgcggaat gacgagttta cgggtaacac cggaaatgtg cgttacatca
     6721 tcgagcatca gcacgtcgcc atccgcattc acgcgatcat aacgaaaatc cagcgtcaca
     6781 tttccgtatt cgcgatcgtc gatccgaact tcatcgcact ggagcagcag gcgatctttt
     6841 tcgcgggcaa aatattcgct ccagagactt tcttcgatgc ccacgacgaa atcggcatcg
     6901 tcgtcgcgtt ttgtccatgt gaacgtcgtc ggcgcgtcga actcgatccg ttttctgcca
     6961 aaagcaatct ttcccacttc caaaacgatc caaagaatca cgtaaccgag cgcggcggcc
     7021 agcgcggcgc gaacaccggc tgccacgcgc gaattggtct gcatcaacgc tggaacaaca
     7081 atgctgcaag ccacgccagc gattgttccg ccgattgtta cacggtccgg aataatgaaa
     7141 tgctcaaaat cgataaacgt tccgatgatc aggaacgaaa cgaaaatcca atacgcaatc
     7201 gccacctgcg aggggaacct ttgccacatc gcaaggaaaa gaagtgcggt gacgagttcc
     7261 accgcaagat agcggaacga aatttttgcg ccgcaattgg cgcatcggcc gccaagcgcc
     7321 agccaactga tcaatggaag attatgatgc catggaatcg gttgtttaca ctgcgggcaa
     7381 aacgatcgac gcggccgatt gatggagaga tcaaccggcc agcggtagat acaaacgttc
     7441 aaaaacgagc cgacggccgc gccgagcaca aaggcaaagg cgctgaagag aagattctga
     7501 atcgaatgct gcatgcgatt aacctgcgat ccgtttcgat gcgcggcgct ccatcagaaa
     7561 tgcaatccag atgcagcttt cgtatagcaa acacatcggc agcgccatgg cgatcaaagt
     7621 cagaatgtca ggcgtcggtg tgatgatcgt tgccagaata aaaatgagca cgacggcata
     7681 tgggcgggtg cgtgccataa atcggtaggt gatcagtccg aatcggacca gcgccagcac
     7741 gacgaccggc agttcgaacg ccagaccaaa tccgatggtg aatcgcgtca cgaacgaata
     7801 atactgctgc accgtccacg tcggtgccca gccgagcgat tgggtatcgc gaaagaaaaa
     7861 aagaattgtt ttcggcagta accaaaaata gcaaaccagc acaccaatga gaaacagcgc
     7921 gaagctgccg gcaatcgctg gaaatataaa ccgtttctct agggcggtaa gcgccggcaa
     7981 aacgaattca gcgagaaaat acaggagcag cggaaaggag aggacgatcc cggcgtaaaa
     8041 cgccagatga aatgaaatca cgatcgaatc tgtgataccg agcgccttga gtgttccgac
     8101 ttgggacccg agatggttaa gcggcgcctg gataatacgc accagcgtcg agcgaaatgc
     8161 gaaacaaaca atcatcgcga tccccagcgt gagagccatc ttcacgatgg tccagcgcaa
     8221 gtcttccaga tgctccagaa acggcttgga cgtttcggtc tccggcggat cgcgaaattt
     8281 aaaaatgtct cgcagcgcca tcgggttgtt ttcgtgcgaa tgcctggcga cttctcgtta
     8341 acacctg
//
LOCUS       DATDAJ010000031         2878 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_153461, whole genome shotgun sequence.
ACCESSION   DATDAJ010000031 DATDAJ010000000
VERSION     DATDAJ010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153461"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1383)
                     /locus_tag="VIS53_00705"
     CDS             complement(67..1383)
                     /locus_tag="VIS53_00705"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5766331.1"
                     /translation="MTEQKNCNIRKHHYAIIAGGMFKVVALLALSANAQPVGTLTERE
                     LIRAVLQENQTLKAAAAKWEMMKARVPQARAWEDLRAGVDWRAERSVNVPPNSFMDQT
                     AMLEQEVPISGKNRSRSRAATAEARAAFEDLRRMELDLIMRARAAYARLANGYSQLEV
                     NRRNTELLNQFVQISRSRYEAGVATQADVLLAQTDAAKLLEAQADIERQISQEQSALN
                     VLMNRPAQARLGQPSELVFTPQTLSLESLQTSAIALRPELRRAQSRIDAERFRLQLAN
                     RQWFPDPALNVKAQRYNSAAQAVSEVDVGVSIPVPWLNWKKYSAGVLEARKTVEEAER
                     QFDATRVETLGLVRDQLKKIQTSANQYELYRDNILPLARQTVEASRAGYEASTGGFLE
                     LITARRTLQDAESAALNRLVEYDVAIAELDAIIGRARPLVEEGGKR"
     gene            complement(1540..1962)
                     /locus_tag="VIS53_00710"
     CDS             complement(1540..1962)
                     /locus_tag="VIS53_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766332.1"
                     /translation="MNEVRGASRARLLIVSITAVAWFLISNHCVLGELQHASQTKASC
                     HQPCCGNQPPAKNTTESATECCKTLRATLTGAAKDFAGYDTSLFALQFYFVGPVICTN
                     DSRPVPILELDTGPPFVHTFAESVLQRSILAHAPPLVA"
     gene            complement(2427..>2878)
                     /locus_tag="VIS53_00715"
     CDS             complement(2427..>2878)
                     /locus_tag="VIS53_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766333.1"
                     /translation="GNRTGYRDSRFFDTLENQISKNGDTGRRMIVKIDIEGGEWESLL
                     AAPDELLASIPQLAMEMHGFDDPKILEVLRKLKRNFYLVNLHFNNWSCTPKAAPLPAW
                     AYQVLWVNKRIGVRDPAAPFPAPMSPLNAPDSPTWADCQLSAPRSDP"
BASE COUNT          625 a          785 c          798 g          670 t
ORIGIN      
        1 gtttcgaaca ggatgccgcg aacgtcgcca tcaacaacac gcaaataagg tggataaaat
       61 gtgagttcaa cgtttacctc cctcttcaac gagcggcctt gctcgtccaa tgattgcgtc
      121 caattccgcg atggcgacgt cgtattcaac gagacgattt agcgcagcag attctgcgtc
      181 ctgcaatgtg cggcgggccg tgatcagctc cagaaacccg cccgtactcg cttcataacc
      241 ggcccggctc gcttcgaccg tttgccgggc cagcggcaga atgttgtcgc ggtaaagctc
      301 gtattgattt gccgaggtct gaatcttttt cagctgatcg cgtaccagac cgagtgtttc
      361 cacacgcgtc gcatcgaatt gcctttccgc ttcttcaacg gttttgcgcg cttccagcac
      421 tcccgccgaa tactttttcc agttcagcca cggaaccgga atagaaacgc cgacatctac
      481 ttcgctgact gcctgggctg cggaattgta gcgttgcgct ttaacgttca gtgccggatc
      541 cggaaaccac tgcctattcg ccaactgtag tcggaacctc tccgcatcga ttcgactctg
      601 cgctcggcgc aactccggtc gcaaagcgat cgcgctcgtc tgcaagcttt ccaaagaaag
      661 cgtttgcggc gtgaagacga gttcggaagg ctggccgagg cgcgcttgcg ccggtcggtt
      721 cattaacacg ttgagcgcag attgctcttg agaaatctgg cgctcaatgt ccgcctgagc
      781 ttccagcagt tttgccgcgt cggtctgtgc aagaagcaca tccgcttgtg tcgctacgcc
      841 agcctcatat cggctgcgac tgatttgcac aaattggttg agcagttcgg tgttgcggcg
      901 attcacttct agttgcgaat agccgtttgc gagacgcgcg tacgcagcgc gcgcgcgcat
      961 gatcaggtcg agttccatgc ggcgaagatc ttcgaacgct gcgcgagctt cagcggtcgc
     1021 cgcgcgtgag cggctccggt tctttccgga gatcggtacc tcctgctcta gcatcgcagt
     1081 ctgatccatg aacgaattcg gcgggacgtt gacggaacgt tctgctcgcc aatccactcc
     1141 tgctcgcaaa tcttcccatg ctctggcctg tggcacgcgc gccttcatca tctcccactt
     1201 tgccgctgcg gctttgagcg tctggttttc ctgtaacacc gcacggatga gttcacgctc
     1261 ggtcaaagtg ccaactggtt gcgcgtttgc ggagagagcc aacagggcaa caaccttgaa
     1321 catgccgcca gcgattattg cgtagtggtg ttttcgaatg ttgcaattct tctgttcggt
     1381 cataaaaatg tttcttctga ttcttgattt acgggtgacg aggcgatccg cccttgcaga
     1441 gcctttgact tgaaccgcga gaaagcgcga ttcgcgtgat ggcctgggag cctggcggta
     1501 acgactacga tgaatcccgc agcggcgggc aaagagtcgt taggctacga gaggcggagc
     1561 gtgagcgaga atgctccgct gcaaaacaga ttcagcgaat gtgtgcacga acggcgggcc
     1621 ggtatctaac tcgagaatgg gaactggtcg tgagtcattc gtgcaaatta ccggaccaac
     1681 aaagtaaaac tgtaacgcga acaatgaagt gtcgtagccg gcaaaatcct ttgccgctcc
     1741 ggtcaatgta gcgcgaagcg ttttgcaaca ctcagtagcg ctctcggttg tgttcttggc
     1801 aggaggttga ttgccgcagc aaggttgatg gcaactcgct tttgtttgcg acgcatgttg
     1861 caactcccca agcacgcaat gattcgaaat gaggaaccag gcaacggcgg tgatgctcac
     1921 aatcaggagc cgagccctgc tcgcgccgcg aacttcattc atggctaatt agtaagagta
     1981 tctcacaaga cgttcaatcc taatcttcgc gtagcgtgag agggagggtg caagaaacgc
     2041 acaatcttta ccaagaactg ccaagctaac ccttccggct ctgtcaaaat aatccatgac
     2101 tcaaaggcta catgatcagc acgaaacagg ttctcaaagt tgtagccgcg cgggtggcgt
     2161 ttcacagaaa aaatgaaagc tagagaaaga tgaaccaact ttatgagcat ggaagattca
     2221 gcggattggg aaattgattg gcaaaagcac tgcatggtct gcgggaagtc cgttttagac
     2281 ggcgaagggt tttgccacat gcgagtagac ggtgaaatgg tggcaatctg ttgcccattg
     2341 tgcttcgaga cctttgaaaa ggatccgaaa cgctatttaa ctttgcgccg gcttcaccag
     2401 aattgatgcc gacattgggt gccgcctcag gggtcggacc gcggtgcgct caactgacaa
     2461 tcggcccaag tcggcgagtc gggcgcgttc agcggactca ttggcgcggg gaacggcgcc
     2521 gccggatcgc gcacacctat ccgcttgttt acccagagca cctggtacgc ccatgccggg
     2581 agcggcgccg ctttcggtgt gcacgaccag ttgttgaagt ggagattcac gagatagaag
     2641 ttccgcttca gcttacggag cacctcgaga atcttcggat cgtcgaatcc gtgcatttcc
     2701 atcgcaagct gtggaatcga cgcgagcagt tcgtctggcg ctgcgagaag cgattcccat
     2761 tctccgcctt cgatgtctat tttgacgatc atacgccggc ccgtatcgcc gttcttgcta
     2821 atctggtttt ccagcgtgtc gaagaaacgc gaatccctgt acccggtgcg atttccga
//
LOCUS       DATDAJ010000032         6696 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_159488, whole genome shotgun sequence.
ACCESSION   DATDAJ010000032 DATDAJ010000000
VERSION     DATDAJ010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6696)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6696)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6696
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159488"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VIS53_00720"
     CDS             <1..198
                     /locus_tag="VIS53_00720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766334.1"
                     /translation="QSDPTPFALAEYNAGASRAQRWSGGNGVTEIPERQFLQKIDFPA
                     TRRYVESIIDRYKFYQRRGRM"
     gene            313..2454
                     /locus_tag="VIS53_00725"
     CDS             313..2454
                     /locus_tag="VIS53_00725"
                     /inference="COORDINATES: protein motif:HMM:NF038122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HEY5766335.1"
                     /translation="MSYIRISAFICIVLGLAGVAGDHRLSGQTAAPAASPFEIGAARH
                     ETRAESQTSLELLNTNEFPSENETVSPPPPTRSSFMATWLGGTRAKGYLLDVSTSSSF
                     DTFVEGYHDLDVGNVTGRVVTGLSRGTTYYYRVRAYDAAGAGNYSDVMTATTVSTVGL
                     VIHPTFDGSITSNPNAAAIEAMISRAISFHESLFTDPITIQIRFRYSTTAPDGTPLSM
                     RTLALTYILLYQIPWSNYIGALRADAMTSNDTQANASLPVTALSGNVRPSSAGGRAVG
                     LNTPPSMFANGSVGQGGPYDAIVTLNSTAPYQFNRPPSASSFDAQRAIEHEVDEAIGL
                     GSRLGGNGNDLRPQDLFSWSSPGDRNISTSGSRYFSINGGVTNIVNFNQNPDGDLGDW
                     LSGQCPQTHPYVQNAFVCPGQYSDISATSPEGISLDVVGYDLIQTSQTSLGNISTRSF
                     VQTGQHVMIGGFIVQGTGPKRVIIRAIGPELTQYGITNALANPRLELHNRTGALIASN
                     DNWQTTILGGIITSNQVSDIQNSGHPPTAASESAIIANLQPGNYTAIVCGVNNTTGVA
                     LVEVYDLSPGASSSLGNISTRSFVQTGEHVMIGGFIVEGSGPKRVIIRAIGPELTQHG
                     ITDALANPRLELHNGTGALIATNDNWQATILGGIITSNQVSDIQNSGHPPTAASESAI
                     IANLQPGNYTAIVRGVNNTAGVALVEVYDLN"
     gene            2500..4335
                     /locus_tag="VIS53_00730"
     CDS             2500..4335
                     /locus_tag="VIS53_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY5766336.1"
                     /translation="MTKEEIASVLEQIATLLELKAENPFKIRAYTNAARAIETFGANV
                     SNFQDEEAVAKIPGIGKSIALKIKELAETGSLKYFQELSTEFPTGILELFSLSGLGAK
                     KIKALHDSLGVSSIAQLQKACEEGRVAELTGFGETTQQKICDAIARRASHVGSFQFGQ
                     IAVDAETLRSDLVVHEATLQVEIAGSYRRRKEIVHDLDLLVATKEPEAVTKFFVSHPL
                     VESVIAQGPTKSSVRLRSGVQCDLRVVTTAEYPFALAYFTGNKEHNIEMRSRALQRGW
                     TLNEYRLALLPIEGRGGSPEPPAAQERAGRLRSIASTSDSKAKKKKSPSKIPSVRDEA
                     DLFRAVDLDFIPPELRENCGEFRAAKQHSLPKLIEKENLRGAFHCHTVASDGHNTLEE
                     MAEAARELGLEYLGIADHSRSSVQGHGIAADKLFEQAAAIRKLNKTFDGFRLFAGVEC
                     DILRDGSLDFPDEVLSQLDYVVASVHSAFNLSESDMTQRVIRALENPFVTMLAHPTGR
                     LLLKRDPYQIDIPAVLDAAARTGTWIELNAAPKRLDLDWRWWPLAKQKGVKCVINPDA
                     HRTERLQDLWFGIGIARKGWLTKEDVVNCLPLGKIEQALRSKCER"
     gene            complement(4393..5196)
                     /locus_tag="VIS53_00735"
     CDS             complement(4393..5196)
                     /locus_tag="VIS53_00735"
                     /inference="COORDINATES: protein motif:HMM:NF039614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase-related protein"
                     /protein_id="HEY5766337.1"
                     /translation="MRELLLCPPDYYGIEYEINPWMSVARGAETAIVQLQWKQLHATL
                     SKFCKVHLITPQPRLPDMVFTANAGLTVGRRFIPSNFRHKERAGEQPFFAKWMEQHGY
                     EVDWLPEKLYFEGEGDALFGNDALFCGYKFRSDIQSHRAIAEMLGCLAISVELVDPHF
                     YHLDTCFCPLPDGGVFWFPAAFDEYGQRAIREHVTDLIDVAPEEAMHFSCNAVVIDRN
                     IVLPEGAPQLVMKLQKRGYRCHALPMGEFIKAGGACKCLTMFMPQREKA"
     gene            complement(5349..6566)
                     /locus_tag="VIS53_00740"
     CDS             complement(5349..6566)
                     /locus_tag="VIS53_00740"
                     /inference="COORDINATES: protein motif:HMM:NF044507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766338.1"
                     /translation="MFSETIELRGHIIDSLILPKVLDQILTHGAHFKIGEITIGQKRA
                     DQSFARIEVSAETSDALDELILRLRQHGAEVAERADAQLASAPVDGVFPPEFYVMTNQ
                     QTFVRVDGKEIEVRPTMMDTAIAVDRKGRAARAVKFFDVHKGDEIVIGHQGVRVVPVQ
                     RATSRTDIFQFINTIIDADEPKSAIIRELAEELRRARKAKSKIAVVAGPAIVRTGAGQ
                     HLVRLIEAGYVDRLFAGNPFAGYDVERALFGTSLGISLDLAFARGGRENVMRAVNAIR
                     QAGSIAAAVEKNLLTSGIMHACVRSNVDVVLTGSIRDEGSIPGATTDAIEGQKVLREK
                     LADVTHALLLASIRHSLAVVSMLAPTVKIVSVDIDPSAVERVVEQQPLQSIGMITDVE
                     PFLRELADCLTTS"
BASE COUNT         1571 a         1822 c         1872 g         1431 t
ORIGIN      
        1 cagtccgatc caactccttt cgctttggcg gagtacaatg ccggcgccag ccgcgcccag
       61 cgttggagtg gtggaaacgg cgttacggaa ataccggaac ggcagtttct gcaaaagatc
      121 gatttccccg caactcgtag atacgtcgag tcgattatcg accgctacaa attctatcag
      181 cgccgcgggc gaatgtgacg agagactgcg tgctaaatgg tggaagttgg ggtacgcact
      241 ggtttttcga cttgtgcagt aagaatgtgc taactagaat tcgcgacctt cgttgagggc
      301 ggaatgggta gcgtgtctta cataagaatt tctgctttta tttgcatcgt actgggactg
      361 gctggcgttg caggcgacca tcggttgtca ggccagacgg ctgcgccggc cgcatcacca
      421 ttcgaaattg gagcggccag gcatgagacc cgcgccgaat cgcagacctc tttggagctt
      481 ctaaacacga atgaatttcc atcggagaat gaaacggttt cgccgccgcc gcccacgcga
      541 agcagtttta tggcaacgtg gctcggtgga acgcgcgcga aaggatactt gctggatgta
      601 tccacgagca gctcgtttga tacttttgtc gaggggtatc acgacctcga cgttggtaac
      661 gtgaccgggc gagtagtgac cggcttgagc cggggcacga cgtattacta ccgggttcgc
      721 gcttacgatg ccgctggtgc gggcaattac tcagatgtca tgactgctac gaccgtatcg
      781 acagtgggat tagtaattca tccgacattc gacggttcga ttaccagcaa cccaaatgcg
      841 gcggccatcg aggcgatgat tagccgagcc atttcatttc acgaatcatt gttcactgat
      901 ccgatcacaa tccagattcg tttccgctat tccacgactg ctcctgacgg gacgcctctc
      961 tcaatgagaa ctctggcgct cacttacatc ttgctttacc agattccatg gagcaattac
     1021 atcggcgcgc tgagagcgga cgcaatgacc agcaacgaca ctcaggcgaa cgcaagtctg
     1081 ccggttaccg cactctctgg aaacgtcagg ccatccagcg caggcggcag ggcagtgggc
     1141 ctgaacactc cgccgtcaat gtttgcaaac ggtagcgttg ggcagggcgg gccgtatgac
     1201 gcgatcgtga cgctcaattc tacagcaccg tatcagttca accggcctcc tagcgcaagc
     1261 agcttcgacg cccagcgtgc aatcgaacac gaagtcgatg aggcgattgg gctcggatcg
     1321 cgcctcggcg gaaacggcaa cgaccttcgg cctcaggact tgttcagttg gtcttcgcct
     1381 ggcgatagaa atatcagtac ttccggcagc cgctatttct cgatcaatgg gggcgtgacg
     1441 aacatcgtga atttcaatca aaatccggat ggagatctcg gcgattggtt gagcgggcag
     1501 tgccctcaaa cgcatccata cgtgcaaaac gcttttgtct gtcctggaca atattccgac
     1561 atctcagcga catcgcccga aggcattagt ctcgacgttg ttggctacga tctaattcag
     1621 acaagccaga caagtctagg taacatcagc acccgcagct tcgttcaaac gggccagcat
     1681 gtgatgattg gtggttttat cgttcaaggt actggaccaa agagagtgat cattcgtgcc
     1741 attgggcctg agcttacgca atacgggatc actaatgcgt tagccaatcc gagattggaa
     1801 cttcacaatc gaactggagc attgattgct agcaatgata attggcagac gacaatactc
     1861 ggcgggatta tcaccagcaa tcaggtcagc gatattcaga acagcggaca ccctccgact
     1921 gcggcaagcg aatcagcgat cattgcaaac ctgcaaccgg gcaactacac cgccattgtg
     1981 tgcggtgtaa acaacaccac tggagttgct ctggtggagg tgtacgattt gagcccaggc
     2041 gcgagttcaa gccttggtaa catcagcacc cgcagctttg tccaaacggg cgagcatgtg
     2101 atgattggcg gttttattgt tgaaggtagt gggccaaaga gggtgatcat tcgtgcgatt
     2161 ggtcctgagc tcactcagca tgggatcacc gatgccttgg ctaatccgag attggaactg
     2221 cacaacggga ccggagcact gattgctacc aatgataact ggcaggcgac gatactcggc
     2281 gggattatca ccagcaatca ggtcagcgat attcagaaca gcggacaccc tccgactgcg
     2341 gcaagcgaat cagcgatcat tgcaaacctg caaccgggca actacaccgc gatcgtgcgc
     2401 ggtgtaaaca acaccgctgg agttgctctg gtcgaagtct acgatttgaa ttaatagccg
     2461 catcgacggc ggcgtaattc aggtttaacc gtcttggtga tgaccaagga ggaaatcgcc
     2521 agcgttctgg agcagatcgc aacgctcctg gagttgaaag ccgaaaatcc gttcaagatc
     2581 cgagcgtaca ctaatgcagc gcgcgcgatc gaaacgtttg gcgcgaatgt atcgaacttt
     2641 caagatgaag aagccgtcgc gaaaattcca ggaattggaa aaagcatcgc gctcaagatc
     2701 aaggagttgg ccgaaaccgg gtcgctaaag tatttccagg aacttagcac ggaatttccg
     2761 accggaattc tggaattgtt ttcgctgtcg ggcctcggcg cgaaaaagat caaggccctc
     2821 cacgacagcc ttggggtcag ttcgatcgcg cagttgcaaa aggcatgcga agaggggcgg
     2881 gtcgcggagt tgacgggctt tggcgaaaca acgcagcaaa agatttgtga tgccatcgcc
     2941 agacgcgcat cgcacgttgg ttcatttcaa tttggccaaa tagcagttga cgctgaaacg
     3001 ctgcgatcag atctggttgt gcacgaagcg actttgcaag ttgagatcgc tgggagttat
     3061 cgacggcgaa aagaaatcgt gcacgatctc gatttactgg tggcaacaaa ggaaccagaa
     3121 gccgttacga aatttttcgt ttctcatccg ctggtcgaat ccgtcatcgc acaaggcccg
     3181 accaaatcga gcgtgcggct gcgttcgggc gtgcagtgcg atctccgagt cgtcaccacg
     3241 gcggaatacc cgtttgcgct tgcttatttc actgggaaca aggaacacaa catcgagatg
     3301 cgcagccgcg cactgcaacg aggttggacg ctcaatgaat atcggctcgc tctgcttccc
     3361 atcgaaggta ggggcggttc acccgaaccg cctgcggcgc aggagcgagc cgggcgattg
     3421 aggtcaatcg cctctaccag cgactcgaag gcgaagaaga aaaagtcacc aagcaaaatc
     3481 ccaagtgtgc gcgatgaagc cgatttattt cgcgccgtcg atctcgattt cattccgccg
     3541 gagctaaggg aaaactgtgg cgaattccga gcggccaaac agcattccct gccaaaactc
     3601 atcgagaaag aaaatctgcg cggcgcgttt cattgccata ccgtcgcaag cgacggtcac
     3661 aatacactcg aagaaatggc cgaagccgcc cgcgaactcg ggctggaata tctcggcatc
     3721 gccgatcaca gccgcagctc cgttcaaggc cacgggattg ctgccgacaa gttgttcgag
     3781 caagcggctg cgattcggaa gctgaacaag acattcgacg gatttcgttt atttgccgga
     3841 gtcgaatgcg atattctgcg cgacggatcg ctcgattttc ccgatgaggt gctgtcgcaa
     3901 ctcgactacg tcgtcgcgtc agttcattcc gctttcaatt tgagcgaatc cgacatgacc
     3961 cagcgcgtga ttcgcgcgct ggaaaacccg ttcgtcacga tgctggcgca tccgactggc
     4021 cgattgctgc tgaaacgcga cccgtaccaa atcgatattc cggcggtgct cgacgcggca
     4081 gcgcgcaccg gcacatggat cgagctcaac gccgcgccca agcggcttga tctcgattgg
     4141 cgctggtggc cattagcgaa acaaaaaggc gtcaaatgtg tgatcaatcc cgatgctcac
     4201 cgcacagagc gactacaaga tttgtggttc ggaatcggca tcgcccgcaa aggctggctc
     4261 accaaagagg acgtagtgaa ttgcttaccg ctcggaaaaa tcgaacaggc gctgcgatca
     4321 aaatgtgaaa ggtagggcgc gatcgccgag cgcgccggaa ctcgggtgac gacccaccgg
     4381 cctgtctctg gctcaagcct tctctctttg cggcatgaac atggtgagac atttgcacgc
     4441 gccgccggct ttaatgaatt cgcccatcgg caacgcgtga cagcggtagc cgcgcttctg
     4501 caatttcatc acgagctggg gcgcgccttc gggcaaaacg atgttgcggt cgatcacgac
     4561 cgcgttacac gaaaagtgca ttgcttcttc cggtgcgaca tcgatcaaat ccgtcacgtg
     4621 ctcgcggatg gcgcgttgcc cgtattcatc gaaggcggcc ggaaaccaaa atacgccgcc
     4681 atcaggcagc ggacaaaagc aggtatcgag gtgataaaag tgcggatcaa ccagctccac
     4741 cgagatcgca aggcaaccca gcatttctgc tatggcgcga tgcgattgaa tgtcggaacg
     4801 aaatttgtaa ccgcaaaaga gcgcatcgtt gccaaagagc gcgtcgcctt cgccttcgaa
     4861 gtaaagtttc tccggcagcc aatccacttc gtagccgtgt tgctccatcc atttggcaaa
     4921 aaacggttgt tctccagcgc gttctttgtg gcggaaattg ctggggatga atctgcggcc
     4981 aaccgtcagc ccggcgttgg cggtgaagac catgtcgggc agtcgcggct gcggcgtaat
     5041 cagatgaacc ttgcaaaatt tggaaagagt cgcgtgcagc tgtttccatt gcagctgaac
     5101 gatcgccgtt tcggcgccgc gggcgacgct catccaggga ttgatctcgt actcgatgcc
     5161 gtagtaatcc ggcggacaaa ggagcaactc ccgcatagga ttgtgaatct acttggcacc
     5221 gcgggattca ctagaactca tgtcaaacag agcgctgtca tgttgagcga agcgaaacat
     5281 ctctagccta tgtttgtcgg gcattgctcc caattgatcc gagattcttc gcttcgctca
     5341 gaatgacact atgatgttgt caggcaatcg gcgagttccc gcagaaatgg ctccacgtct
     5401 gtgatcatgc cgattgactg taatggctgt tgttcgacga ctcgctcgac agccgaggga
     5461 tcgatatcga cggatacgat tttcactgtc ggcgcgagca tgctcaccac cgcaagcgaa
     5521 tgccggatgc tcgccagcag caacgcgtgc gtcacgtcag cgagtttttc gcgcaagact
     5581 ttttggccct caattgcgtc tgttgttgcg ccgggaatcg atccctcatc ccgaatcgag
     5641 ccggtgagta cgacatcgac attgctacgc acgcaggcgt gcatgatccc gctggtcagg
     5701 agattttttt caacagctgc tgcaatgctg cccgcctggc gaatcgcatt gaccgcgcgc
     5761 ataacgttct cgcggccacc gcgcgcgaac gcaagatcga ggctgatgcc caaagaagtg
     5821 ccgaacagcg cccgttccac gtcgtaaccg gcaaatggat ttccggcgaa aagtcgatcg
     5881 acgtagcctg cctcgatgag gcgcaccaaa tgctgacccg caccggtccg cacaatcgcg
     5941 gggccggcca caactgcgat tttgcttttg gccttgcgag cgcgtcgcag ttcctcggcc
     6001 aattcgcgaa taatggccga tttcggttca tcagcatcga tgatcgtgtt gatgaattga
     6061 aaaatatccg tgcgcgacgt cgcgcgttgc acaggcacca cgcgcacacc ttggtggcca
     6121 atgacgattt cgtcgccttt atgaacgtcg aagaatttaa cggctcgcgc ggcgcgccct
     6181 ttccggtcca ccgcgatcgc ggtgtccatc atggtaggcc gcacctcgat ctccttgccg
     6241 tcgacgcgga cgaaggtttg ctggttcgtc atcacgtaga actcgggcgg gaaaacgcca
     6301 tccaccggag cggaagctag ctgggcgtct gcgcgttcgg cgacttcggc gccgtgctgt
     6361 cgcagcctca gaattaattc atccagcgcg tcgcttgtct cagccgagac ttcgatgcgc
     6421 gcaaagcttt ggtctgcacg cttttggccg atcgtgatct cgccgatctt aaaatgagcg
     6481 ccgtgggtta aaatttgatc gagcactttc ggcaagatca gcgaatcaat gatgtgaccg
     6541 cgtaactcga tcgtctccga aaacatcgac agaagttagc gagggaaaag caccgcgcca
     6601 gtgagccgaa attgtgcggc ggcgcttgtg cccatgggtg aatttgatac gtatgcgact
     6661 gacacaaacg cctctacaac gagcaagatc aatatg
//
LOCUS       DATDAJ010000033         5841 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_161396, whole genome shotgun sequence.
ACCESSION   DATDAJ010000033 DATDAJ010000000
VERSION     DATDAJ010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5841
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_161396"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..951)
                     /locus_tag="VIS53_00745"
     CDS             complement(<1..951)
                     /locus_tag="VIS53_00745"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5766339.1"
                     /translation="MSNGTTEIASGAVRDIEPELRELFTKIVERDPREAVKMLGPYPD
                     EFVVKMLELLNPAAALKILQRFDLSRRETILATASTETTQQWMRNQTYPERTVGRLMQ
                     PPLAVFRPTTTVAEATEQIRRLARKTIITYAFVTDEQDKLLGVVVMRDMLLAQRGQRL
                     EEIMLPDPFHLNPDMSLPQAMRAVLVRHYPVYPVCEKSGQLLGLVRGQMLFEAQAVEL
                     SAQPGEMVGVETEERLTTPWTRSLRFRHPWLQVNLFCGLLAAVVVGLFEHTIDRIIAL
                     AVFLPVLIGQAGNTGIQALAVCLRGVTLGDLRSGKERLLLG"
     gene            1027..1875
                     /locus_tag="VIS53_00750"
     CDS             1027..1875
                     /locus_tag="VIS53_00750"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: protein motif:HMM:NF014228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEY5766340.1"
                     /translation="MEIAAFSQFYVVRVLVLTGAGVSAESGIPTFRGKDGYWRNLDPT
                     KLATPEAFARDPQLVWEWYRERRQRIRTARPNAAHEAIARLAQCTNEFLLVTQNVDDL
                     HARAGVEAETMVQIHGDIFVTRCSRCDFSHPGGRGSPEPPDACVVQPRNGRLKSRNGC
                     EATAGLSIPPTSECDLNVPTCPQCQALMRPGVVWFGEQLSPNELERVENFLDGGPCDV
                     VIVAGTTVTFGYIIDWALRPSRDGAELIEVNPEETPLSRFATRLVREPAAIAVPRIVE
                     ELIAFG"
     gene            complement(1963..2778)
                     /locus_tag="VIS53_00755"
     CDS             complement(1963..2778)
                     /locus_tag="VIS53_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766341.1"
                     /translation="MENFICVQCGTQFAETAEPPRRCPICEDERQFVRHAGQEWKTLK
                     RLAIDHHNRIEEEAPRLLGVGTEPEFAIGQRALLVQSPGGNLLWDCISLLDDETIAEV
                     NARGGIRAIAISHPHFYSSMIEWAECFNAEIFLHLADREWVMRPARAGSRIQFWEGST
                     LSFWDGLTLINCGGHFEGGTVLHWPTGANGKGALLTGDIITVVQDRRYVSFLRSYPNL
                     IPLGGSAIRRIVERIEPFSFEQIYGGWWQANVLADAKAAVARSAERYLRAISR"
     gene            complement(2805..4172)
                     /locus_tag="VIS53_00760"
     CDS             complement(2805..4172)
                     /locus_tag="VIS53_00760"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5766342.1"
                     /translation="MMSGITGAPRGKRFALVLLIVASLRLACADTATDRVGKFVTEYL
                     KKNQIPGCVVMVRHDGKVALCQGYGVANVEHAVRVTSQTVFQSGSIGKQFTAMAIMML
                     IEEQKLALDDPLSKYLDVPENWSAIRIRHLLTHTSGLGDYPESFSLQRDYTEDALLKM
                     ITAQPLTFAPGEKWSYSNLGYVTLGILIHKVSGEFWGDLLQQRVFAPLDMKHTRVISE
                     ADIIPNRAAGYMLKNGALKNQAWVSPTVNNTADGSLYFTVEDLAKWDEALETRKLISG
                     ASYDQMWTPVKLNNGTTAAYGFGWRIAKTDSGHRVLEHGGAWQGFSSYIVRYPEDGLS
                     VAVLCNRAGASASYIAKRIAGLYVPSVAPRLRTAIKLDPAILSSYTGEYRLEDRFSIK
                     VSVAGDRLETIWLGEKIMLLPESETDFFQEDSDRTFRFVKDAGGKVTSLIISVPEDLV
                     LRKVR"
     gene            complement(4169..5440)
                     /gene="kynU"
                     /locus_tag="VIS53_00765"
     CDS             complement(4169..5440)
                     /gene="kynU"
                     /locus_tag="VIS53_00765"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030429 - kynureninase activity [Evidence
                     IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HEY5766343.1"
                     /translation="MNFGPNENFARQLDREDPLRDFREKFSLPLDKDGKPVIYFAGNS
                     LGLMPKSARQIVDDELDNWARLGVDAHHATGTPWYTYHEALREPTARLVGAKPLEVIC
                     MNSLTVNLHLMMATFYRPTKSRFKVLMEDPAFPSDTYAIKTQLIHHGLDPKDALVLAR
                     PRKGEFTVRTEDIFDLIDKHADHLAVVIMGAVNFFTGQLVDIEKVTAAAQKHKIAVGF
                     DLAHAAGNVPLSLHEWNVDFAVWCSYKYLNAGPGAVAGAFVHERHATNTKLPRLAGWF
                     GNDPNTRFRLHLEPEFVPVASADGWQISNPPIFSMAPLRASLSIFHEAGGMEPLRAKS
                     MKLTGYLEFLIEQIGSKKFSIITPADPSARGAQLSIQAHEHPKQLHEELIAGGVKCDF
                     REPNVIRVAPTPLYNTFHEVWRFAQILAAHK"
     gene            complement(5437..>5841)
                     /locus_tag="VIS53_00770"
     CDS             complement(5437..>5841)
                     /locus_tag="VIS53_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY5766344.1"
                     /translation="FSLLAKDRHTVEASRYIAGAGDPLYFTPLHRVEVRNALRNAAGR
                     KEITDLECRAAFRLIENRLHEELFVHAAVEWTNVFRRADELSEEHALKDGQRIVDLLH
                     VAIAVDFRATTFLSFDQRQRRLARASGLRVYP"
BASE COUNT         1277 a         1649 c         1620 g         1295 t
ORIGIN      
        1 gcccaagagc aggcgttctt tcccggatct caagtcgccc agggtaacac cgcgcaagca
       61 gaccgcgagt gcctgtatcc ctgtattccc agcctgacca atgagcacag gcagaaacac
      121 cgccagcgca atgatccgat cgattgtgtg ctcgaacaat ccgacgacga cagcggcaag
      181 caggccgcag aacaaattta cctgtagcca cggatggcgg aaccttaagc tccgcgtcca
      241 aggcgtagta agtcgttcct ccgtttcgac accgaccatt tcgcccggct gcgcgcttaa
      301 ctcgaccgcc tgcgcttcaa aaagcatctg accgcgtacc aggccgagga gttgcccgga
      361 tttttcgcag acgggataca ctggataatg ccgaaccagc actgctctca tcgcctgtgg
      421 caacgacata tcggggttta gatggaatgg atccggcaac atgatctctt ccaagcgttg
      481 cccgcgttgc gccagtagca tgtcgcgcat gaccacgacc ccaagaagtt tgtcttgttc
      541 gtccgtcaca aacgcgtagg tgataatcgt ttttcttgcg agccggcgaa tttgctccgt
      601 agcttcggcg acagtcgttg tcgggcgaaa gactgccagc ggcggctgca tcagccgccc
      661 gacggtgcgt tccggatagg tttgattgcg catccactgc tgcgttgttt cggtagaagc
      721 agtggccaga atcgtctcgc gccgggataa atcgaagcgt tggaggatct ttagtgctgc
      781 cgcgggatta agcagctcga gcatcttaac cacgaattca tccggatacg gcccgagcat
      841 ctttactgct tcgcgcgggt cgcgttcgac tattttcgta aagagttctc gaagttccgg
      901 ctcaatatcg cgcacagcgc ccgatgcaat ctctgttgtg ccgttactca tgggcgcgag
      961 tgtggcaagc cgagcgtgaa ctggcaatat taagtctcgc ggcgctgaag tttgccgaat
     1021 gacaatttgg aaatcgctgc tttttctcaa ttttatgtcg tgcgtgtgct cgttctcacc
     1081 ggcgcgggtg tttcggctga aagcggcatc ccgacttttc gcggaaagga tggctattgg
     1141 cggaaccttg atccaacaaa actcgcgaca ccggaagcgt tcgcgcgcga tccgcaacta
     1201 gtttgggaat ggtaccgcga gcggcggcag cgcatccgca ctgcgcgacc gaacgctgcg
     1261 catgaagcaa tcgcacgact tgcccaatgc acgaacgagt tcctgctcgt tacgcagaac
     1321 gtcgatgatc tacacgcgcg agctggtgtg gaggcagaaa cgatggtgca aatccacggc
     1381 gacattttcg tcacgcgctg ctcacgctgc gacttttcgc acccaggtgg gcggggttca
     1441 cccgaaccgc ccgacgcgtg tgtcgttcag cccaggaatg ggcgattgaa gtcccgtaac
     1501 ggatgcgaag caacggccgg gctttccatc ccccctacct cagaatgcga tctcaacgtt
     1561 ccaacctgtc cacaatgcca ggcgcttatg cgcccaggcg tggtgtggtt cggcgagcaa
     1621 ctgtcgccga acgaactgga acgagtcgaa aattttctgg acggcggacc ttgtgacgtg
     1681 gtgatcgttg ccggaactac tgtcacattt ggttacatca ttgattgggc gctccgcccc
     1741 agccgggatg gcgccgaact tattgaagtg aatcctgagg aaacaccgct ctcacgattc
     1801 gcaacacggt tagtgcgcga gccggctgcg atcgccgtgc cgcgcattgt tgaagagctg
     1861 atcgcttttg gatgaaccaa gtcgtagcca cggccctgtg ggccgtctgc tctaatcatc
     1921 cgatgagacc cgccacaggc cggtggctac aggaatggga acctaacgac tgatcgcgcg
     1981 cagatagcgt tcggcggatc gcgcaaccgc tgcttttgca tccgcaagaa cattcgcctg
     2041 ccaccagccg ccataaatct gctcgaatga gaacggttcg attctttcga cgatccggcg
     2101 gatcgccgag cctccgagcg gaatgagatt gggataactc cgcagaaaac taacataacg
     2161 tcgatcctgc acgacggtaa tgatgtcgcc ggtgagcaag gcgcctttgc cattagcacc
     2221 ggttggccaa tgcaacacgg tgccgccttc aaaatgaccc ccgcaattga ttaacgttag
     2281 cccatcccaa aatgacagcg ttgatccttc ccagaattga attcgcgatc ccgcgcgtgc
     2341 gggacgcatg acccattctc gatcagccaa atgcaaaaag atttcggcgt tgaagcactc
     2401 ggcccattcg atcatcgaag agtagaaatg cggatgcgaa atcgcgatgg cgcgaatgcc
     2461 gccgcgtgcg tttacctcgg cgattgtctc gtcgtccagc aaagagatgc aatcccagag
     2521 cagattccct ccgggcgatt gcacaagcaa agcacgctgg cctattgcaa attccggttc
     2581 agtgccgacc cccagaagcc gtggcgcttc ctcttcgatg cggttgtgat gatcgatcgc
     2641 gagccgtttg agcgtcttcc attcctggcc ggcgtgacgg acgaattgcc gttcatcttc
     2701 gcaaattgga cagcgccgcg gcggttccgc agtctcagca aactgcgtcc cgcattgcac
     2761 gcagatgaag ttttccatga caagatttcg ccacgtaacc tgcttcagcg caccttacgc
     2821 agcacgaggt cttcgggcac ggagatgatc agcgatgtaa ctttgccgcc ggcgtctttc
     2881 acgaaacgaa atgttcgatc tgaatcttcc tggaaaaagt ccgtttccga ttcaggaagg
     2941 agcataattt tttcacccag ccagatggtc tcgagccgat caccggccac gctcactttg
     3001 atactgaagc gatcctcgag acgatattcg ccggtgtacg aactcaggat tgcaggatcg
     3061 agtttgattg ccgtgcgaag gcgcggcgct acagacggaa catataatcc agcgatacgc
     3121 ttcgcgatgt agctggcgct cgcaccagca cggttgcaca acaccgccac acttaggcca
     3181 tcctcaggat agcgaacgat gtaggaagag aatccctgcc aggcgccgcc atgttcgagc
     3241 acacggtgac cggaatcagt ttttgctatt cgccaaccaa aaccgtaagc ggcggtcgtg
     3301 ccgttgttaa gtttgaccgg tgtccacatt tgatcatagc tggcgccgct tattaatttt
     3361 ctcgtctcca gcgcttcgtc ccatttcgcg aggtcttcga cagtgaagta caagcttccg
     3421 tctgcggtgt tgttcacagt gggcgatacc cacgcttgat tcttgagcgc gccattcttg
     3481 agcatgtaac cggcggcgcg attcgggata atatcggctt cgctgatcac gcgtgtatgc
     3541 ttcatatcga gcggtgcaaa aacacgctgc tgtagcaagt cgccccagaa ttcgccgctc
     3601 actttgtgaa tgagaattcc gagcgtgaca tagccgagat tgctgtagct ccacttttcg
     3661 ccaggagcga aagtgagagg ttgcgccgtg atcatcttca gcagcgcatc ctcagtataa
     3721 tcccgctgca gcgagaaact ttcaggataa tcgccgagtc cggaggtgtg cgtcagcaaa
     3781 tgccggatgc gaatggcaga ccagttttcc ggcacgtcca ggtatttcga gagcggatcg
     3841 tcgagcgcga gtttttgctc ttcaatcagc atcatgatgg ccatcgcggt gaattgcttt
     3901 ccgatcgagc cggattgaaa cactgtttgc gacgtgacgc gcaccgcgtg ctctacgttc
     3961 gcgacaccgt atccctgaca aagcgcgact ttgccatcgt gccggaccat caccacgcac
     4021 ccgggaattt ggtttttctt caggtattca gttacaaact tgccaacccg atctgttgca
     4081 gtatcggcgc aagccaggcg caagctggcg acaatgagta gtacaagtgc gaaccgctta
     4141 cctcgcggcg caccggttat gcccgacatc atttatgcgc agcaagtatt tgggcaaagc
     4201 gccacacttc gtgaaaggtg ttgtagagcg gcgtcggcgc gacgcgaatt acgttcggct
     4261 cgcgaaaatc gcatttcacg cccccggcga tgagttcttc gtgtaattgc tttggatgct
     4321 cgtgcgcctg aatcgataat tgcgcgccgc gggcactcgg gtcagccgga gtgatgatcg
     4381 agaatttctt tgaaccgatt tgttcgatca agaattcgag atagccggta agtttcatcg
     4441 attttgcgcg gagcggttcc atgccgccgg cctcgtggaa aattgagagc gacgcgcgca
     4501 gcggcgccat cgagaaaatt ggcggattac taatctgcca accgtcagcg gacgcaacgg
     4561 ggacaaactc cggctcgaga tgcaatctga atcgtgtatt cggatcattc ccaaaccaac
     4621 cggcgagccg cggtaatttt gtgttcgtcg cgtggcgttc atgcacaaac gcgcccgcaa
     4681 ccgcgccggg gccggcgttc aaatatttgt atgaacacca cacggcgaaa tcgacgttcc
     4741 attcgtgcag cgagagcggc acgttgccgg ccgcgtgtgc gagatcgaac ccaacagcga
     4801 ttttatgttt ctgtgctgca gccgtgacct tttcgatgtc gactaattga ccggtgaaaa
     4861 aattcaccgc gcccatgatc accactgcaa ggtgatcggc atgtttgtcg ataagatcga
     4921 aaatgtcttc cgtgcgaacg gtgaactcgc ctttgcgcgg gcgagccaga acgagcgcgt
     4981 ctttcggatc cagtccgtga tgaatgagct gcgtcttaat cgcataggtg tcggaaggga
     5041 acgccggatc ctccatcagg actttgaagc gcgattttgt tggcctataa aacgtcgcca
     5101 tcatcaagtg aaggttcacc gtgaggctat tcatgcagat cacctcgagt ggcttcgcgc
     5161 caacgagtcg tgccgtcggt tcgcgcagcg cttcgtggta cgtataccac ggcgtcccag
     5221 tagcgtgatg cgcatcaacg ccaagcctgg cccagttgtc cagctcgtca tcgacgatct
     5281 gcctcgccga ttttggcatc aggcctaacg agttgccggc gaaatagatg actggtttgc
     5341 cgtctttgtc gagtggcagc gaaaattttt cgcggaaatc gcggagcggg tcctcgcggt
     5401 cgagttgccg cgcgaaattt tcgttagggc caaaattcat ggatatactc ttaaacccga
     5461 tgcccgcgcg agtcgcctct gccgttgatc gaatgaaagg aaggtagttg cgcggaagtc
     5521 caccgcgata gcaacatgca ggaggtcgac aatgcgctgg ccatccttga gagcatgttc
     5581 ttcactgagc tcgtccgcac gtcgaaaaac gtttgtccac tcgaccgcag cgtgaacaaa
     5641 caattcctcg tgcaaacggt tctcgatgag ccgaaatgca gcgcgacatt ccaggtcggt
     5701 gatttctttg cgaccggcgg cgttccgcag tgcattccgg acttcaaccc ggtgcaatgg
     5761 cgtgaagtac agagggtcgc cggctcccgc gatatagcga gacgcctcca cagtgtgacg
     5821 atcttttgcc agcagtgaaa a
//
LOCUS       DATDAJ010000034         4852 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_167979, whole genome shotgun sequence.
ACCESSION   DATDAJ010000034 DATDAJ010000000
VERSION     DATDAJ010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167979"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            79..858
                     /locus_tag="VIS53_00775"
     CDS             79..858
                     /locus_tag="VIS53_00775"
                     /inference="COORDINATES: protein motif:HMM:NF020604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stf0 family sulfotransferase"
                     /protein_id="HEY5766345.1"
                     /translation="MGGLFHKLRHPRRCYVVCTIPRSGSNLLTDGLRDTRRAGMPKQF
                     FLPKAESGYGAELGIDPAGDYAAYVRAIVNTKVTRNEVFGFKLMSWYLDDFLARLREA
                     HSFGNSTTSDLELLCSAFPRLCFLRIVRRHKLRQALSTARALQTGLWKVQKGKSILRE
                     PEFDPELIEQSLHEAERQEKIWDDFFRRLGIKPFTVEYEKLCQDYESTIRAVLNFLRI
                     KLPAGARVGPPETTRQADEISRMWEERFLAERPSAYSAASG"
     gene            866..3466
                     /gene="gyrA"
                     /locus_tag="VIS53_00780"
     CDS             866..3466
                     /gene="gyrA"
                     /locus_tag="VIS53_00780"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY5766346.1"
                     /translation="MLNPNEKIEPINVAEEVSRSFLDYSMSVIISRALPDARDGLKPS
                     QRRILYAMHDLSLFPGRQHRKCAKICGDTSGNYHPHGEAVIYPTLVHMAQAWAMRERL
                     IDGQGNFGSVEGDPPAAMRYTEARMTHLGAALMTDMEKDTVDFVPNYDETRTEPTVFP
                     AAFPNLLVNGATGIAVGMATNIPPHNLSEVIDGICAQIDNPDITLDELMQHVKGPDFP
                     TGCMICGVNGIRQYFETGRGSVKVRGKAGVEELKGGREQIVITQIPYGVNRATLVERI
                     AQLVNDKVLTDISYVGDQSDENTRVVIELKRDANPKVIIANLYKHTALESSFATTMLA
                     IDRGRPKLLPLKEANAVYIDHRREVVLRRTRYELRKAEERAETLEGYLIALANLDEFL
                     RIIRGSANRDEARVKLFAFEFTKRQVEQLGILIRNPARLTDGRYAFSEQQADEILNLR
                     LYQLTGLEREKIVNEYKELVETINDLRDILAKEQRVFTIIKKELREIRDKYGSPRLTE
                     IAPDEAEINIEDLIVNEGCIISITHAGFIKRTAVSAFRAQRRGGKGVIGMQTRDGATE
                     EEEGDFVEHLFAATTHDYLMFFTATGRAYVEKVYEIPEMGRAAKGRSIANILELKPDE
                     KIAATIRVQSKKSGTGPNAVDQTWDENLHIVFATQSGIVKKSNLSDYANVRRGGIIAI
                     QIEDGDRLIDAKLTNGNNEVVFITRKGMSLRFHEEQLRDQGRNTVGVWGIRPEKNDHV
                     IAIAIVDPDAMLLVAGENGIGKRTSFDEYRRQSRGGKGIITMKAGEKTGEVVGALSVR
                     ETDELMLITNKGQMVRTRVREIRETGRNTMGVKLMDLRNGEKLQAIAPVVSQVEEEEA
                     QSAEAPPQKL"
     gene            complement(3585..3767)
                     /locus_tag="VIS53_00785"
     CDS             complement(3585..3767)
                     /locus_tag="VIS53_00785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766347.1"
                     /translation="MKKGMILSAALSVVALMLVSCAGEPEATTTTTRQTTVTTAAPPP
                     TGSRTTTTTHVGTGGY"
     gene            3870..3995
                     /locus_tag="VIS53_00790"
     CDS             3870..3995
                     /locus_tag="VIS53_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766348.1"
                     /translation="MRFATVKEQQIEGLKKRNAARSTDEKGKAGIKALPELIWWS"
     gene            complement(3992..4390)
                     /locus_tag="VIS53_00795"
     CDS             complement(3992..4390)
                     /locus_tag="VIS53_00795"
                     /inference="COORDINATES: protein motif:HMM:NF012684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEY5766349.1"
                     /translation="MMDVSRNALADRMRKLEISETDLEESFARSSGPGGQNVNKVSTA
                     VTLRHLPTGISVTVQDSRSQAVNRKLARERLVDAIESARQEQRMAEVAKREKERRRKS
                     PRPAALKRKILESKRRRAELKKQRTKIKLD"
     gene            complement(4444..4530)
                     /locus_tag="VIS53_00800"
     tRNA            complement(4444..4530)
                     /locus_tag="VIS53_00800"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4495..4497),aa:Leu,seq:taa)
BASE COUNT         1189 a         1351 c         1320 g          992 t
ORIGIN      
        1 gggcgatgtt gtcgaacctc gccggcaatt catcgaggac aacgcgctaa acgtgcggaa
       61 tctcgacgta taggcgcgat gggaggtttg tttcataagc tgcgtcatcc gcggcgctgt
      121 tatgtggttt gcacgattcc gcgttcggga agcaatttgc tcacggacgg attacgcgac
      181 acccggcgag ccggcatgcc taaacaattt tttctgccga aagccgaatc gggctatgga
      241 gcggagctcg ggattgaccc cgctggtgat tacgccgcgt acgtgcgcgc gatcgtgaat
      301 acaaaggtaa cacgcaacga agtgttcggt ttcaaactga tgagctggta cctggacgat
      361 tttctcgcgc ggctacgaga ggcacacagt tttggaaatt ctacaacaag cgatctagag
      421 ttattgtgca gcgctttccc ccgtctttgt tttctgcgca tcgtgcgacg tcacaaattg
      481 cgccaggcgc tgtccacggc tcgcgcactt cagacaggac tttggaaagt gcagaagggc
      541 aaaagcattc tgcgagaacc ggagttcgat ccggagctaa tcgagcaatc actgcacgaa
      601 gctgaacggc aggagaaaat ctgggacgat ttcttccggc ggctcggaat taaacccttc
      661 acagtggaat atgaaaagct gtgccaggat tatgagagta cgattcgcgc agtgttgaac
      721 tttctaagaa tcaaacttcc ggctggtgcg cgcgtcggac cacccgagac gacccggcaa
      781 gccgatgaga tttcacgcat gtgggaggag cgcttccttg cggaacgtcc atccgcatac
      841 tccgcagctt ctggctaacc gaatcatgtt gaatccaaac gaaaaaatag agcctatcaa
      901 cgtagccgag gaagtatcgc gctcgtttct cgattactcg atgtcagtca tcatttctcg
      961 cgcactgccg gatgcgcgcg acggactcaa gccatcgcag cggagaattc tatacgcgat
     1021 gcacgacttg tcgctttttc cggggcggca gcaccgcaaa tgcgcaaaga tctgcggcga
     1081 caccagcggt aactaccatc cgcacggcga agcggtgatt tatcctacgc ttgtccacat
     1141 ggcgcaggcg tgggcgatgc gcgaacggct gatcgacggt caggggaatt tcggatccgt
     1201 cgaaggcgat ccgccagcgg cgatgcgcta caccgaagcg cgcatgaccc atctcggcgc
     1261 agcgctgatg accgacatgg aaaaggacac ggtcgatttt gtgccgaatt acgacgaaac
     1321 gcgcaccgag ccgacggtct tcccagcagc atttccgaat ctgctcgtta acggcgcaac
     1381 gggcatcgcc gttggcatgg cgacgaatat tccgccgcac aatctgagcg aagtcatcga
     1441 cggaatctgc gcgcaaatcg acaatcccga tatcaccttg gacgagctga tgcagcacgt
     1501 gaagggcccg gacttcccga ccggctgcat gatttgtggc gtcaacggga ttcgccaata
     1561 tttcgagacg ggccggggca gcgtcaaagt gcgcggcaaa gcgggcgtgg aagaactcaa
     1621 gggtggccgc gaacaaatcg ttatcacgca aattccttat ggcgtgaacc gcgccacgct
     1681 ggttgagcgg atcgcgcagt tggtaaacga caaagtgctt accgacatca gctacgtcgg
     1741 cgatcaatcg gatgagaaca cgcgcgtcgt catcgagctc aaacgcgacg ccaacccgaa
     1801 agtcatcatt gccaatctct acaagcacac cgcgctggag agttcgtttg ccaccaccat
     1861 gctggctatc gaccgcggcc ggccgaagtt actgccgctc aaggaagcta acgcagttta
     1921 catcgaccat cggcgcgaag tcgtcctgcg tcgcacgcga tacgaattgc gaaaggctga
     1981 agagcgcgcg gaaacgctcg aaggttatct gattgcgctc gccaatctcg atgaattcct
     2041 gcgtattatt cgtggatcag ctaatcgcga cgaagcgcga gtaaaactct tcgcattcga
     2101 atttacgaaa cgccaggtcg aacaactggg catcctcatt cgcaatcctg cgcgcctgac
     2161 cgatggccga tacgcattta gcgaacaaca ggcagacgaa atcctgaatc tacgtctgta
     2221 tcagctgacc ggactcgaac gcgagaaaat cgtcaacgaa tacaaggagc tcgtcgagac
     2281 catcaatgat ttgcgtgaca tccttgccaa agagcagcgc gtcttcacca tcatcaaaaa
     2341 agaactacgc gaaattcgcg acaaatacgg ctctcctcgc ctaaccgaaa ttgctcccga
     2401 cgaagcggag atcaacatcg aagaccttat cgtcaatgag ggttgcatca tcagcattac
     2461 gcacgctggc tttattaagc gcacggcggt gagcgcgttt cgcgcgcagc gacgtggcgg
     2521 caagggcgtg attggcatgc agacgcgcga cggcgccacc gaagaggagg aaggcgattt
     2581 cgtcgagcac ctcttcgcag ctaccacgca cgattacctg atgttcttca ccgccacagg
     2641 acgcgcttac gtggaaaaag tttacgaaat tcccgagatg ggacgcgcgg caaaagggcg
     2701 ttctatcgcg aacattcttg agcttaagcc cgacgaaaag atcgcagcca cgatccgcgt
     2761 ccaatccaaa aaatcaggca cggggccgaa cgcggtcgat caaacatggg acgaaaatct
     2821 gcatatcgtg ttcgcgacac aatccgggat cgtcaaaaaa tcaaacctat cggattacgc
     2881 gaacgtccgc cgcggcggca tcatcgccat tcaaatcgaa gacggcgatc gcttgatcga
     2941 cgcgaaacta acgaatggca acaacgaggt ggtattcatt actaggaagg gaatgagctt
     3001 gcgtttccat gaagagcaat tgcgcgacca gggtcgcaac accgttggcg tttggggaat
     3061 tcgcccggag aaaaacgatc acgtcatcgc catcgccatt gttgatcccg acgccatgct
     3121 cctcgtggcc ggtgagaacg gaattggcaa gcgcacctcg ttcgacgaat accgacgtca
     3181 atcgcgcggc ggcaaaggca ttatcacgat gaaagccggt gagaaaaccg gcgaggtcgt
     3241 cggcgcgctc agcgtccgcg agacggatga actcatgctc atcaccaaca aaggtcaaat
     3301 ggtgcgcacg cgagtgagag aaattcgcga gaccggccgc aatacgatgg gcgtgaaact
     3361 aatggatctc cgcaacggcg aaaagcttca ggcaatcgcg cccgtagtaa gtcaggtgga
     3421 ggaagaggaa gcccaaagcg cagaagcgcc ccctcaaaaa ctctgagccg tcacgactgc
     3481 ggccttcggc ttgtgtccgg tcggattcag agctgctctt tgacctgtga agacggctct
     3541 agaaagccgt acccacgaca gacgaaaccg accggcgctg acaatcagta cccgccggtg
     3601 cccacgtgcg tcgttgttgt cgtccgcgaa ccggtaggtg gcggcgctgc cgttgtgacc
     3661 gtggtttgac gtgttgtggt tgtggtcgcc tccggctcgc cggcgcacga aaccaacatc
     3721 agggccacca cggataatgc agcactcagt atcattcctt ttttcatagc gtaaatggtt
     3781 tgtttacaat ccaattcgtc acaagttgcg tcggcagatg tattaggaca aaaattcttt
     3841 ctttccgccg agaatagcaa tcgctcgctg tgcgctttgc tacggtaaaa gaacagcaga
     3901 tcgaggggct caagaagcga aatgccgctc gctcaactga cgagaaaggc aaagcaggca
     3961 ttaaagcgct accggaattg atttggtgga gttaatccag cttgatcttt gttcgctgct
     4021 tctttagctc tgcccgcctg cgtttggatt ccaggatttt cctcttcagt gcagctggcc
     4081 tcggcgattt cctgcgccgc tctttttcgc gctttgcgac ttcagccata cgctgttctt
     4141 gtcgagcgct ctcgatcgcg tcgaccaatc gttcccgcgc gagcttgcgg ttcaccgctt
     4201 gcgaacgcga atcctgaacg gtcacgctga tgccggtcgg aagatgccgc agcgtcactg
     4261 cggttgaaac tttgttcaca ttctgacctc cagggccact tgaccgcgca aagctttcct
     4321 ccaaatcggt ctcgctaatt tcaagctttc gcattcggtc agctaacgcg tttcgcgaca
     4381 catccatcat tctactactc cgtcgagttt tgaaacttcc cggttcacgc tcttcgaacg
     4441 aattgccgat ggccggactc gaaccggcac gggccaatta cggcccaacg gattttaagt
     4501 ccgttgcgtc taccattccg ccacatcggc gctgcggcgt gcattctaag cttcttccaa
     4561 taccggcgaa aatggatttc gcagcaacaa caaagttcgc cccggcttga aagagagctt
     4621 gtcttaggtt cggaaacttc taaaaaacca acatttggcg ccgtcgttgt ttggcgggcc
     4681 gaaaaagaga atcgaaatct ccccatggcg caaaagcgca aatcaccaaa gaaaaaagca
     4741 gccgccaaac gtccgcagtg gaaaaagcca gccaaacaga ggatccaacc ggcttaggag
     4801 attctcttcc gtatcgaagg aaaaatgtcc acattcggtg ggccacgcga ta
//
LOCUS       DATDAJ010000035         2752 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_183233, whole genome shotgun sequence.
ACCESSION   DATDAJ010000035 DATDAJ010000000
VERSION     DATDAJ010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183233"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VIS53_00805"
     CDS             complement(<1..428)
                     /locus_tag="VIS53_00805"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5766350.1"
                     /translation="MSTLFFKRFLKRPFQIASIVPSSKAMVERVASKMDFSQSRVIAE
                     YGPGEGVHSREIARRMTPDSHLLLFELDAQLARALERQFAGDRRVHVIHGDAASLPYE
                     LKRRGFASCDYILSGIPFSILKIEKKRALLRKTYDALKPDG"
     gene            559..633
                     /locus_tag="VIS53_00810"
     tRNA            559..633
                     /locus_tag="VIS53_00810"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:591..593,aa:Val,seq:gac)
     gene            complement(682..1959)
                     /locus_tag="VIS53_00815"
     CDS             complement(682..1959)
                     /locus_tag="VIS53_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766351.1"
                     /translation="MLNTLDTVIAFAVIMTVLSLLITLVVQMVSAALSLRGKNLANAL
                     ALTFQTIDPSIGKYAHSLAAQILSDPIFSDSFWQQKTRSLDENAQKFIAAQRKLRDAK
                     RRRPDDPNRADAIIKATAEVNTTKAAVTMPNVTPNREKPWGFWAVPWGGSMKIATAIR
                     PGEIYRVLQEMREMTPEEAQLLNIPPALVEKARGLVAALHQLDLPAIESRVKLKDIAA
                     AAKMFAPEQQKVVLDALGSFGATVERATTQAYDRFQRWFGSAQDRAEQWFQTHVRIVT
                     IVGAILVSVFLQLDSVEIYDKLRHEPKLIEALVKAAPGTLEQGAAMQGQLDADAREKA
                     FADLKAKIDSTGFELLPRGWFARWSTEKFWWFNHLFGLALSAGLLTLGAPFWFNLLKN
                     LTNLRPAVATLVEKRPTSAPALPAAPSTPPSSS"
     gene            2178..>2752
                     /locus_tag="VIS53_00820"
     CDS             2178..>2752
                     /locus_tag="VIS53_00820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEY5766352.1"
                     /translation="MSELPQLRDAIEAATQTLRALSSLEPQMAQAADVIDQCLRARNK
                     LLVCGNGGSAADASHFATELVVRFAKDRRALPAICLTSDSGILTAAANDYGFDEIFAR
                     QVAAFGVPGDVLICLTTSGKSKNVVRALQEAKARQMKTIALLGRDGGSTVGIADLELL
                     VKSDSTARVQEAHELLLHVLCDIIESRLDKR"
BASE COUNT          602 a          760 c          747 g          643 t
ORIGIN      
        1 ccgtccggct taagcgcatc gtacgtcttt cgcagcagtg cgcgcttctt ctcgatcttg
       61 agaatgctga acggaatacc cgaaagaatg taatcgcacg aagcgaatcc gcggcgtttc
      121 agctcgtacg gcaacgaggc cgcatcgcca tgaatcacat gcacgcgtcg atcgcctgca
      181 aattgccgtt ccagtgctct tgccagctgc gcgtcgagtt caaacaggag caaatgggaa
      241 tccggcgtca tccgtctcgc gatctcacgt gaatgcacgc cttcgccagg gccgtactcc
      301 gcgatcacgc gcgactggct gaaatccatt ttgctggcga cacgctccac catcgccttg
      361 gagctgggta caatcgatgc gatttggaat ggacgcttca gaaaacgctt gaaaaaaagt
      421 gtgctcacgg ggagcgaaat gttcgtctga ggtgttctgg ttgtccagta tcgatctgat
      481 ttgtgacaag tgcctgtgat tagttctcgt gtggcttgac tgattactca tcaccgatca
      541 gttatcactg acttccatgc gcggttagct cagtggtaga gcactacctt gacacggtag
      601 gggtcagagg ttcgaaacct ctaccgcgca ccactcctct agcgtgtagc gacgtttcaa
      661 gcttcaatct aattagcgat gttagctgga cgaaggagga gttgacggcg ccgctggcaa
      721 cgccggtgcg cttgtgggcc gtttttcaac aagagtcgcc accgccgggc gaaggttcgt
      781 cagattcttg agcaggttaa accaaaacgg cgcgccgagt gtcagcagtc ctgcgctcag
      841 cgccagcccg aacaagtggt taaaccacca gaatttttcg gtcgaccagc gagcgaacca
      901 accacggggc aacagctcaa atccagtgct gtcgatcttc gcttttaaat cggcaaacgc
      961 tttctctcgc gcgtcggcat cgagttgacc ctgcatagcg gcgccttgct caagcgtgcc
     1021 gggcgctgct tttaccagcg cttctatgag ctttggttcg tgccgcagtt tgtcgtaaat
     1081 ctcgaccgaa tcgagttgga gaaagacgct gaccaggatc gccccgacaa ttgtgactat
     1141 gcgcacgtga gtttggaacc attgttcggc ccgatcctgt gcactgccga accagcgctg
     1201 aaaacgatcg taagcctgcg tggtggcgcg ctctaccgtc gcgccaaagc ttcccagcgc
     1261 gtccagaacg actttctgct gttcaggtgc gaacatcttt gcagccgctg cgatgtcttt
     1321 cagttttacc cgcgattcga tcgccggcag gtccaactgg tgcagggctg caaccaatcc
     1381 tcgcgctttt tcgaccaacg ccggcggaat attgagcaac tgtgcctctt caggagtcat
     1441 ttccctcatc tcctgaagga cgcgataaat ttctcccggc cggatcgcgg tagcaatctt
     1501 cattgagcca ccccatggca ccgcccaaaa tccccatggt ttttcgcgat taggggtcac
     1561 gttcggcatt gtgactgccg ctttagtggt gttcacttcg gcagtcgcct tgataatcgc
     1621 atcggcgcgg ttcggatcgt ccggtctgcg ccgtttcgca tcacgaagct ttctctgagc
     1681 tgcaatgaac ttctgtgcgt tctcgtccag actccgcgtc ttttgctgcc aaaatgaatc
     1741 gctgaaaatc ggatcgctta agatttgtgc cgccaatgaa tgcgcatact tgccaatact
     1801 cggatcaatg gtttggaacg tcagcgccag cgcatttgcc agattcttac cgcgcaacga
     1861 aagcgccgct gagaccatct gcacaacaag tgtgataagc aggctgagaa ccgtcatgat
     1921 caccgcgaag gcgatcactg tatcaagcgt gtttagcata aaagtggtac agcctccgac
     1981 gggacgagag tccgatcagt taaagcgagt ttgttcacgt ggggcccgtg ttgtagctat
     2041 ctttatcggt ttgagaaatc tcagacaaga taaaaggcca gtcggagggc cccgctggca
     2101 gagccgcgca ttgattttgc ctcgagcatc gaaaagctgt atcaacagca atcgcttcca
     2161 gataaagcct gcagccaatg tctgaactcc ctcaattacg cgatgcgatt gaagcggcaa
     2221 cgcagactct tcgcgcactt tccagcctcg aaccacagat ggcgcaagcg gccgatgtaa
     2281 tcgatcaatg tttgcgcgca cgaaacaaac tgctcgtttg cgggaacggc ggcagcgcgg
     2341 ctgatgcatc gcattttgcg acagaacttg tggtacgttt tgctaaagat cgacgcgcgc
     2401 ttccggcgat ttgtctcacg agcgatagcg gaattctcac cgcggctgcg aacgattatg
     2461 gcttcgatga gatctttgcc cggcaggtgg cggcgttcgg tgttccgggc gatgtgctaa
     2521 tttgcctgac cacctcgggt aaatccaaaa atgtggtgcg cgccttgcaa gaggcgaaag
     2581 cgcgtcaaat gaagacgatt gcgttgctcg ggcgcgatgg cggatcgacc gttggcattg
     2641 ctgatctcga gctcctcgtc aaaagcgatt caaccgcgcg agtccaggaa gcgcacgagc
     2701 ttttgctgca tgtgttgtgc gacataatcg aatcacgtct cgataaaaga ta
//
LOCUS       DATDAJ010000036         3461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_187289, whole genome shotgun sequence.
ACCESSION   DATDAJ010000036 DATDAJ010000000
VERSION     DATDAJ010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3461
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187289"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1779
                     /locus_tag="VIS53_00825"
     CDS             <1..1779
                     /locus_tag="VIS53_00825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5766353.1"
                     /translation="LLSSVSLLLLLIFFVDATITVWRRGDRRRALVVGGSMILGAILA
                     WHVPLVMWGIIDIPFFLCFAYSGIVAAMAYELSDDLLRAAQLARKLEVSQAALHKTEQ
                     DMEIAASAVGLALWTWDIANDDVRLSHKARAVLGFSPSEKLDTERISSVIHPDDRDRL
                     RKAVKNSLQTGAENPFEYRVVLPDGQIRWLVRRSRTEFDHNGKPVLMHGILFDITKRR
                     LAEERFRLVVEAAATAMIMVNKQGRITLINKRVETLFGYSRDELIEQPVETLIPERQR
                     SGHRGFRHGYLCDPQARPMGAGRELFGRRKDGSEVPIEIGLNPIHTSEGLFVLASIVD
                     ISERKQAELEATRQRNDLAHLARVTTLGELSSSLAHELTHPLTAILSNAQAAQRFLEG
                     DDVDLSEVREILNDIVTEDQRAAEVIHRLRRLLKKGEPQNYCDDVDLNEVIGDVLKLM
                     RNDLINQNVTVITDLAQDLPPVTGDRVQLQQVLLNLVLNACEAMTGNGSSKRQLLIAS
                     KLTKSAVRVSVTDRGGGIPEQKMEQVFERFFTTKKKGMGLGLSICRTIIDAHRGKIWA
                     TNDADRGATFHFRLPIMPIARSERRQ"
     gene            1961..2587
                     /locus_tag="VIS53_00830"
     CDS             1961..2587
                     /locus_tag="VIS53_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5766354.1"
                     /translation="MPSPLDPTVFVVDDDAAVRKAVSRLLRSAGVAVAVFASPREFLA
                     QYDPATPGCLVLDVAMPGFSGLQLQTALSEKGTSLPIIFLTGHGDVSKSVQAMKGGAF
                     DFLTKPVNAKNLLPAIHAAIEKDAVARQERARLSEICARLNTLTPREREVLEHVVAGK
                     LNKQIADDLGITEATVKMHRARVMAKMKAQSVADLVRLAELCGSRGTS"
     gene            2937..3338
                     /locus_tag="VIS53_00835"
     CDS             2937..3338
                     /locus_tag="VIS53_00835"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5766355.1"
                     /translation="MTKACLLIAVVDDEEPVRKALMRLMRSAGLNAETFGSGAEFLKS
                     LDTRLPDCVVLDLHMPRMNGFKVQAHLAGKCAALPVIIITGHDLPQARERAMQGGASA
                     FLRKPVLDRILLDAISAATTSAQPGGSPNGK"
BASE COUNT          791 a          961 c          940 g          769 t
ORIGIN      
        1 ctgcttagtt ccgtgagcct gctgttgctg cttatctttt tcgtcgatgc cacgattacc
       61 gtctggcggc ggggcgaccg gcggcgcgca ttagttgtcg gcggcagcat gattttaggc
      121 gcgattctgg catggcacgt cccgctcgtg atgtggggaa tcatcgacat cccgtttttc
      181 ctctgcttcg catattcggg aatcgtggcg gcgatggcct acgaattgag cgacgatctg
      241 ctccgcgcgg cacagctggc acggaaactg gaagtaagtc aggcggcact gcacaaaaca
      301 gagcaggaca tggagatcgc ggcgagtgcg gtcggcctcg ccttgtggac ttgggacatc
      361 gcgaacgatg acgttcggct ctcccacaaa gcgcgagctg ttttgggttt ctctccatcg
      421 gaaaagctcg atacggaacg cataagcagc gttatccatc ctgacgatcg tgacaggttg
      481 cgtaaggccg tgaagaattc tttgcagacg ggcgcggaaa atccattcga atacagggtg
      541 gtgctgcccg atggtcaaat ccgctggctt gtcaggcgca gccgtaccga gttcgaccat
      601 aacggtaagc ctgttttgat gcacggtatt ttgttcgaca tcacgaaacg caggcttgcc
      661 gaagagcgct tccggctggt ggtcgaagcg gcggctaccg cgatgatcat ggttaacaaa
      721 caagggcgga tcacccttat aaacaaacgg gtcgagaccc tttttggcta cagccgggat
      781 gaactcatcg agcagcctgt cgagacgctc attccagagc ggcagcggtc tggccaccgt
      841 ggctttcggc acggttacct ttgcgatccg caagctcggc cgatgggcgc cggacgggaa
      901 ctctttgggc gacgcaagga cggcagcgag gtcccgatcg aaatcggcct caacccaatt
      961 cacacgtctg aaggattgtt cgtgttggcc tctattgttg acatcagtga gcggaaacag
     1021 gccgaattag aggcgacccg ccagcgcaac gacctggcac atctcgcgcg tgtgacgacg
     1081 ctaggggaac tttccagctc gcttgcgcac gagctaaccc acccgctcac cgccattctc
     1141 agtaacgctc aggccgccca gcgatttctg gagggtgatg atgtcgatct aagtgaggta
     1201 cgcgagatcc tcaatgacat cgtaaccgaa gaccaacgcg ctgccgaagt gatccaccgc
     1261 ttgcgccggc tgctaaaaaa aggggaaccg caaaattact gcgacgatgt cgatctgaat
     1321 gaagtgatag gagacgtttt gaaattaatg cgtaatgatc tcatcaatca aaacgtaacc
     1381 gtgattactg atctcgcgca ggatttgccc ccagtcaccg gcgaccgtgt ccagcttcaa
     1441 caagtcctcc ttaacctggt gctgaatgcc tgcgaagcga tgaccggtaa tggttcttcg
     1501 aagcgccaac tgctcatcgc ttctaaactg acgaagagcg cggtgcgggt atccgtcacc
     1561 gatcgtggcg gcggcattcc ggagcaaaaa atggaacaag ttttcgagcg tttcttcacc
     1621 acgaaaaaga aaggaatggg gcttggcctc tccatctgcc gcaccatcat tgacgcacac
     1681 cgggggaaaa tctgggccac gaatgatgcc gaccgcggcg cgacgtttca ttttcgcctg
     1741 ccgataatgc ccattgccag gtcggaaagg aggcagtgat tactgaccag aagccatctc
     1801 ataatgtcat tctgagtgaa gcgaagaatc gcaggtcgaa tctggaccga gccaccaacg
     1861 aaatacccag agctgtttcg tttcgctcaa catgacagcg cccacttatg acatgaagtt
     1921 ctaatcgctg actaatcgct gacgaactac tgactaacta atgccttctc cccttgatcc
     1981 caccgtgttt gtcgtggacg acgatgcagc ggtccgaaaa gccgtctcgc gtttgctgcg
     2041 ttcggctggc gttgcggtgg ccgtgtttgc gtcaccaagg gaattccttg cccagtacga
     2101 tccagccacg cccggatgcc tcgtgcttga tgtcgcgatg cctgggttca gtggccttca
     2161 gctccaaacg gcactgagcg agaaaggcac cagcctgccg attatttttc tcactgggca
     2221 cggtgatgtt tccaagagcg tgcaggcgat gaaaggtggc gcgtttgatt tcctcaccaa
     2281 acccgtcaat gctaaaaatc tgcttccggc gattcacgcc gcgattgaga aagacgctgt
     2341 cgctcgccag gaacgggcca ggctttctga aatttgcgcg cgtctcaaca cgctcacacc
     2401 gcgcgagcgg gaagtgcttg aacatgtcgt cgccggcaag ttgaacaaac aaattgccga
     2461 tgacctgggc atcactgaag cgacagtcaa aatgcatcgc gcccgcgtga tggcgaaaat
     2521 gaaggcgcaa tcagtcgccg acttggtacg gttggcggag ctttgtggga gcagaggaac
     2581 tagttagtag tcagctttag taatcagcag actgaggctg ctggctttga agcgtcctct
     2641 actgttcaac ctatcctatg tttgtcattt cgagcatccg tacctttgtc attccgaccg
     2701 gagtcgagga atctctggct gtgctatcta attgattgag agatctctgg acccattcga
     2761 cttcgctcag ggcaaagact tccgctcgag ataacaatct gcggctcaaa agctacgtct
     2821 ttaacgtggc gctgattacc gtcccttttc catactagcc taaagtatac tagccttagg
     2881 tataataacc caaggtctaa tagcgcggac tccctctacc gggttagtct cgctccgtga
     2941 ccaaagcttg tctgctcatc gccgtcgttg atgacgaaga acccgtccgc aaagcgctga
     3001 tgcgcttgat gcgttccgct ggtctgaatg cggagacatt cggctccggt gcggagtttt
     3061 tgaaatcgct cgatacacgc ctgccggatt gcgtcgttct cgatctgcac atgccgcgca
     3121 tgaacgggtt taaggtgcag gcgcatctcg ccgggaaatg cgcagcgctt cctgtcatca
     3181 ttatcaccgg tcacgatttg ccgcaggccc gcgagcgcgc catgcagggc ggcgcatcag
     3241 ctttccttcg caaaccagtg ctcgaccgca ttcttcttga tgccatttct gccgcgacca
     3301 cgtccgctca accaggagga agtcccaacg gtaaataaat ttcaaaggac tcccaaacgg
     3361 aaacaaacca aaaccaaaca actccaaaaa actttttcga gaacttcgtt ccggagattc
     3421 ctaagaagat gctcgcgcgg ctgatacccc caaacaaaaa c
//
LOCUS       DATDAJ010000037         2521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_196574, whole genome shotgun sequence.
ACCESSION   DATDAJ010000037 DATDAJ010000000
VERSION     DATDAJ010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196574"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VIS53_00840"
     CDS             <1..236
                     /locus_tag="VIS53_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766356.1"
                     /translation="GLAVALLIWIARTDPVINYLPLHRDADWIVFPTGGATTRLCSAE
                     RGAFPGEYGRHKTKRKHSRVGRANVPYHQEPEH"
     gene            complement(259..1764)
                     /gene="der"
                     /locus_tag="VIS53_00845"
     CDS             complement(259..1764)
                     /gene="der"
                     /locus_tag="VIS53_00845"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEY5766357.1"
                     /translation="MRDALVNGTHTLPNVAIVGRPNVGKSALFNRLVRRKIAIVHDQP
                     GITRDRLSATCTRGERPFTLWDTGGIFGAGESELTRQVRHAAENALRESDLLLFVVDG
                     KEGLSPVDEELARMLRKSQKPVVLVINKIDTEKHDPLAVEFDSLGFERIISVSAEHDR
                     GISELLDAIELQLPSPSDIDHPTLVHRSLGEGGSNVEHPIAIAIVGRPNVGKSSLINS
                     IVRGERAIVSELPGTTRDAIDIVYERDGLKFVFIDTAGIRRRGKVSNSAEVFSVMRAE
                     RSIRRADVCVVVIDLTMGVTAQDKRIAGLIQKARKPAIIVLNKWDLVKPRRGEKQSAK
                     ELIEETCSRIFFLKYAPVLITSASTGENVDRLFAKIHKVQHAARKRIGTGVLNRLLRQ
                     AFEANPPPLVKGRRLKLFYATQPKNGGLLGRRSLGDGGQSTEESLRKARSDKSRGNLV
                     PPEFVLFVNDPQLMTEAYRRYLEARIRESEPYPGLPIILSLRARDRDVGRR"
     gene            complement(1765..>2521)
                     /gene="pgsA"
                     /locus_tag="VIS53_00850"
     CDS             complement(1765..>2521)
                     /gene="pgsA"
                     /locus_tag="VIS53_00850"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEY5766358.1"
                     /translation="EKRIILAYRVFKIFATRALAYGVCVRRQLLRSSVGVSQKRPTIV
                     LPLQRAMTTANKITVVRILMIPAFVTMAMYYGESVQRGQPLEWQRFAAIAIFILAAMS
                     DGLDGYVARRYNQRSTLGVILDPIADKGLLLSGIITLSLTNWSEIEPESGKFPVWFPV
                     LVISRDAILLVGTLVLYLLNGKVQVKPHWTGKIATVLQMVAIGWVMLQLRVIPLFYVV
                     LAAGAFTLISGILYVTDGVRQLQAEGHAHPAKP"
BASE COUNT          555 a          693 c          691 g          582 t
ORIGIN      
        1 ccggcctggc agtggcgctc ctgatatgga tcgcacgtac tgatccggtc attaattatt
       61 tgcctcttca tcgagatgcg gactggatcg tttttccgac tggcggcgcg acaactcggt
      121 tatgtagcgc tgagcgaggc gcgttccctg gggaatacgg acgccataaa actaagcgaa
      181 aacattctcg cgtcggtcgc gcaaatgttc catatcacca ggagcccgag cactagccgg
      241 tctctgtcgc ttgcaaaatc agcgtcggcc gacatctctg tcgcgggcac gcagcgataa
      301 aatgattggc agcccgggat acggttcaga ttcgcggatg cgagcctcga ggtaacggcg
      361 atatgcttcg gtcatcaact gaggatcatt tacgaacagg acgaattccg gcggtacgag
      421 attgcctcga gatttatcag agcgggcttt tctaagtgat tcttcggtgg actggccgcc
      481 gtcgccgagg ctacgccgcc ccaggagacc gccgttcttc ggttgcgttg cgtaaaacaa
      541 cttcaggcgg cggcctttga ccaatggagg tggattcgct tcaaacgcct ggcgtagtaa
      601 tcggttgaga actcctgtgc cgatgcgctt tcgcgcggca tgttggactt tgtggatctt
      661 agcaaaaagc cgatcaacat tttcgccggt cgatgcagac gtgattagca ccggcgcgta
      721 tttgaggaag aaaattctcg agcacgtctc ctcgattagt tccttggctg actgcttttc
      781 cccgcgtctc ggcttaacca agtcccattt gttcaagacg atgatggctg gttttcgcgc
      841 cttttgaatc agtccggcga tccgtttgtc ctgggccgtt acacccattg tgagatcgat
      901 aacgacaaca caaacatcag cgcggcgaat gctgcgttcg gcgcgcatta cgctgaaaac
      961 ctcagccgag ttggaaactt tccctcggcg gcggattccg gcggtgtcga tgaaaacgaa
     1021 cttcaagccg tcgcgttcgt aaactatgtc gatggcatcg cgtgttgtgc cgggcagttc
     1081 gcttacaatg gcgcgttcgc cgcgcacgat ggagttgata agcgaagatt tacctacatt
     1141 tggccgaccg acgatcgcga tcgcgattgg atgctcaacg ttcgatccac cttcgccgag
     1201 gctacggtgg acaagtgttg gatgatcgat gtcagaaggc gaggggagtt gcagttcgat
     1261 tgcgtccagt aattctgaaa tcccacgatc atgttctgcg ctgacggaaa ttattctttc
     1321 gaagcccaac gaatcgaact ccactgccaa cgggtcgtgc ttctcggtgt ctattttgtt
     1381 aatcaccagc acgaccggtt tttgcgattt gcgcaacatc cgcgccagtt cctcatcgac
     1441 aggcgacaag ccttcctttc cgtcgacaac gaaaaggaga agatcgctct cacgaagcgc
     1501 gttttcggcg gcgtgccgta cctgccgggt tagttcggac tcgcctgcgc cgaaaatccc
     1561 accggtgtcc caaagtgtga acggccgttc gccgcgagtg caggttgccg aaagtcgatc
     1621 gcgcgtgatc ccaggttgat catgaacaat cgcaatcttc cggcgaacaa gacgattgaa
     1681 cagcgcggac ttgcctacat tcggccgtcc gacaatcgcc acgttgggca gcgtgtgggt
     1741 cccattcacc aaagcatccc gcatctaggg tttcgctgga tgcgcgtggc cttcggcctg
     1801 caactgacgg acgccatctg taacgtaaag gatccctgaa atcagtgtga atgcgccggc
     1861 tgcaagcaca acgtaaaaca ggggaataac acgcagttgc agcatcaccc atccgatggc
     1921 caccatctgt aaaaccgtcg cgatctttcc cgtccagtgt ggttttacct gcacttttcc
     1981 gttgagcaaa tacaggacaa gcgtcccgac cagaagaatg gcgtcgcgcg aaattacgag
     2041 cactgggaac cacaccggga attttccgct ctcaggctca atctcgctcc agttcgttag
     2101 gcttaacgtg ataataccgc tcagcaacaa ccccttgtcg gcgatgggat cgagaatgac
     2161 tccaagtgtg ctgcgttgat tgtatcgtcg agcgacgtaa ccgtcgagtc cgtcactcat
     2221 cgcggcgagg atgaaaattg cgatcgctgc gaaccgctgc cattcgagcg gctggccgcg
     2281 ctgaacgctt tcgccatagt acatcgccat tgtgacgaaa gccggaatca tcaatatccg
     2341 gacaacggtg attttgttgg cggtggtcat cgcgcgctgc agcggcaaaa caattgtagg
     2401 gcgtttctgt gaaacgccaa cgcttgatcg aaggagctgg cgtctgacac agacgccgta
     2461 ggccaacgct cttgtagcga aaatcttgaa aactctatac gcgagaatta tcctcttctc
     2521 g
//
LOCUS       DATDAJ010000038         4824 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_206297, whole genome shotgun sequence.
ACCESSION   DATDAJ010000038 DATDAJ010000000
VERSION     DATDAJ010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4824
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206297"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..557)
                     /locus_tag="VIS53_00855"
     CDS             complement(<1..557)
                     /locus_tag="VIS53_00855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766359.1"
                     /translation="MKFIFAIFLLPMCGVSTQTFFTAFARATVTQRLWTGEEFWFFSL
                     GAVLWLITFFGLPRPILVYVFGHELTHALWVWLMGGRVSQFRVGPDGGHVITTKANFW
                     IALAPYFFPIYSILTIAIYGALSVFLNMQPYGRLLYAVIGATWAFHFTFTCWMIPKNQ
                     TDLTDQGTFFSLVVIYLMNLLLLSV"
     gene            complement(850..1407)
                     /gene="efp"
                     /locus_tag="VIS53_00860"
     CDS             complement(850..1407)
                     /gene="efp"
                     /locus_tag="VIS53_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEY5766360.1"
                     /translation="MPAANDLRRGMAIKYNGNPAIVLEVHHRTPGNLRAFVQAIIRYI
                     NTGKSADVRFGSTDKVELVDIERKQLEFSYKDRNGYHFMDPETYDTITLAENLIGEAS
                     DYLVENLSVQVLYAEGKAVQVELPASVSLKVVESAEGLRGDTASNVTKPAKLETGKTI
                     NVPLFIKEGEAIKIDTRTGAYMGRA"
     gene            complement(1618..2589)
                     /locus_tag="VIS53_00865"
     CDS             complement(1618..2589)
                     /locus_tag="VIS53_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEY5766361.1"
                     /translation="MDSLEKAARVLDLEIFELQRLRKRLDENFSRAVELIKETVDSRG
                     KVVVVGVGKSGHIGAKIASTLTSTGSPAVVLDSSNALHGDLGMIADGDVVLALSASGE
                     TEEMLRILPAITRFQVRIIAVCGDPKSTLAQNAHVCLDVNVEQEACPLNLAPTSSTTV
                     MLALGDALAMVLLETRGFNKEDFAKFHPGGMIGRSMLMRVHQVMRPRDAMAIVAIDTP
                     IRDVLRAMTSVRAGAAVVTGEDNQLLGIFTHGDFVRHFQSDSRIGERLVADLMTLNPV
                     TVHKEKLAVEVLNLLERHRIDDLVVIDDDNVPVGIVDSQDLTRLKLL"
     gene            2656..2955
                     /locus_tag="VIS53_00870"
     CDS             2656..2955
                     /locus_tag="VIS53_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766362.1"
                     /translation="MKTLMIAILAALLASASAQEFRAPLGPQKPVRAMETPPPVSERP
                     RVEGALPKAFGRGRNPLQMLNPWAPARYGLWVENTSFDPNYPGKWKGIKLFEIVF"
     gene            complement(2995..4056)
                     /locus_tag="VIS53_00875"
     CDS             complement(2995..4056)
                     /locus_tag="VIS53_00875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766363.1"
                     /translation="MTSQHTEFRLTVLNPGGRDPEQQFHSVPDPGEGSHPPINFHAFA
                     ACSFGAFHRDARSALAEKTPVLLLLRSDFRASERALTALKREGRMVAVSFKETGLHQI
                     AQQLRDPAKLLRFIKIVTQADACIATTPEAAEIYQRVRSKHDPATVAFIPTPYPIEDQ
                     RWDFSMPRDAQSGIFVGTREWDVPSRNHFAALLVARQLWKATAEPVTVVNLDGYKGRR
                     LLGELDFPEGKLRLIDKWKTYPDYLRDVARHKIVLQLDDSHVPGQVAGDALLCRIPCV
                     GGDGAIERIAFSKTCGEDRTINEVASMALHLLKNPELRKAVVAESQRRAREWLSFEAV
                     RTQLAKFFANVQSTSDFDS"
     gene            complement(4191..>4824)
                     /locus_tag="VIS53_00880"
     CDS             complement(4191..>4824)
                     /locus_tag="VIS53_00880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766364.1"
                     /translation="KPPSSLKQIEICSRSGQLATDKCYDAVKSANGDTVQRRSTYMEI
                     ATQAQAPTELCNIHGEPRARLAREFGSSDLPRAELAVNLSEVMPVAIKSPTLIADDDP
                     YDSIKPTVMPDTTPQPATETAEAQKSDTATGANEVKAASNNASLTTQSAPEIRKAVPV
                     QTIPEAIPVQPQERQPSEIRRAIPVKPLDQEDTERTLLRSAAQPPGDLHE"
BASE COUNT         1056 a         1347 c         1336 g         1085 t
ORIGIN      
        1 atgacgctga gcagtaaaag attcatcagg tagatgacga cgagcgaaaa aaatgtgccc
       61 tgatccgtga gatcggtctg attcttgggg atcatccagc aggtgaacgt gaaatggaac
      121 gcccacgtag cgccaatcac ggcgtaaagc agtcgcccat acggctgcat gtttagaaaa
      181 acgctgagcg cgccataaat cgcgatcgtc agaatgctgt agatcgggaa gaaatacggc
      241 gccagcgcga tccagaagtt cgccttggtg gttatcacgt gcccgccgtc cggaccgacg
      301 cgaaactggc tcacgcgacc acccatcaac cacacccaga gcgcgtgggt tagctcgtgc
      361 ccgaatacgt aaaccaagat tgggcgcggc agaccgaaga aagttattag ccacagcacc
      421 gcgcctaacg aaaagaacca gaattcttcg cccgtccaca accgttgcgt cacagttgcg
      481 cgcgcgaacg ccgtgaaaaa tgtctgcgtc gaaaccccgc acatcggcag cagaaaaatc
      541 gcaaaaataa atttcaccca ctttgtggga acggtgagcg gctcggattc cgcgatgaag
      601 cttcgcgagg ttgtgcgcgc aacgctacgg acaactttcc cgtggcgctt cgaattgcgc
      661 gtgcctcgat tcttttcctt tgatgtgcgc ttcgtcgcca aatcgtccgc agattacgca
      721 gaattataca aaccgatgca agactgaacc gcggattggg caacgatcgc ggatattgta
      781 gggcaggcgc ttcgcctgcc aggcctcggc aaccggagcg gttgccctac agtgaacaga
      841 aacgcagctc tacgcgcggc ccatgtacgc gcctgtgcga gtgtcgattt tgatagcctc
      901 gccttccttg ataaaaagcg gcacgttaat ggtcttgccg gtttccagct ttgccggctt
      961 ggtgacgtta ctggcagtat ctccgcgcag accttccgct gattcaacca ccttcaaact
     1021 tacagaggca ggcagctcca cctggacggc cttgccttcc gcataaagga cctgcacgga
     1081 aaggttctcc acaaggtaat cactggcttc gccaatcaga ttttccgcga gcgtgatcgt
     1141 atcgtacgtc tccggatcca tgaaatgata gccgttgcga tccttgtaag aaaattcgag
     1201 ctgttttcgc tcgatatcga ccagctcgac tttgtcggtg gaaccaaacc ggacgtcggc
     1261 gcttttgcct gtattgatgt agcggatgat ggcctgtacg aatgctcgca aattccccgg
     1321 cgtgcgatga tggacttcaa gcacaatggc tggattgcca ttgtatttga tggccatccc
     1381 tctgcgtaga tcgttggcgg cgggcatgat taagacgtga tcgtttagaa aggttacacg
     1441 tttaaaatgt tgaagcggta agcgctacag cggcgagagc gcggagttta catgcgcttg
     1501 gcgtaagcgc aactctgtca acctgagcga agcgaagcgc agtcgaagga tcctccggct
     1561 agacgttcga gctaacgcaa cgggattcct cgacttcgct cggaatgaca gagcggttta
     1621 cagcaatttt aaccgcgtca aatcttgcga atcgacgatg cccaccggca cattgtcgtc
     1681 atcaatcacg accagatcgt caatccgatg gcgctccagc aggttcagaa cttccaccgc
     1741 cagtttctct ttgtgcaccg tgactggatt caacgtcatc aggtctgcca ccaatcgttc
     1801 gccaatgcgg gaatcagatt gaaaatgccg cacgaaatct ccgtgggtga atatgccaag
     1861 cagttggttg tcctcgccgg tcacaacggc agcgccagcg cgcacgctag tcatcgccct
     1921 aagcacgtcg cgtatcggtg tgtcgatggc gacaatcgcc atcgcatcac gcggtcgcat
     1981 gacttgatga acgcgcatca acatgctgcg accgatcatg ccgccgggat gaaatttggc
     2041 gaaatcctcc ttgttaaacc cgcgcgtctc caagagcacc atcgccagcg cgtcgcccag
     2101 cgccagcatc actgtcgtgc tcgacgtcgg cgccaggttc agcggacaag cttcctgttc
     2161 gacgtttaca tcgagacaaa catgcgcgtt ttgcgccagc gttgattttg gatcgccgca
     2221 aacagcgatg atcctgactt ggaaccgcgt gatcgccggt aagatccgga gcatttcttc
     2281 cgtctcgcca ctcgcgctca atgcgagcac cacgtcgccg tcggcgatca tgcccagatc
     2341 gccatgaagc gcgttagacg aatccagcac caccgccggg gagcccgtgc tggtgagagt
     2401 agatgcgatc ttcgcgccga tgtgcccgga tttgccgacg cctacgacca cgactttccc
     2461 tcgggaatcg actgtttcct tgatcagctc aacggcgcgc gagaaatttt catccagccg
     2521 cttccggagc cgctggagtt caaaaatttc taaatccagg acgcgtgcgg ccttttcaag
     2581 agaatccatc gaaagatata ttgtgtgcag gcgtggttgg gggcaacatt cgcttgcgtt
     2641 gaacgaaagg gaaacatgaa gacattgatg atcgcaatcc tggccgcgct gctggcgagc
     2701 gcgtccgccc aagaattcag agcaccgctc ggtccgcaaa aaccggtgcg cgcgatggaa
     2761 acgccgcctc cggtctccga gcggccaaga gttgagggag cacttccgaa agcctttggt
     2821 cggggtcgca acccccttca aatgctcaat ccgtgggcgc cggcgcgcta cggactttgg
     2881 gtggaaaata catcgttcga tcccaattac cctgggaaat ggaagggcat taagctcttc
     2941 gagatcgtct tttgatttca gtagaggcat tcgccgtggc gaatgcctcg caatctacga
     3001 atcaaaatcc gacgtgcttt ggacgttagc aaaaaacttt gccaattgcg tgcgcaccgc
     3061 ctcaaatgag agccattctc gtgcgcgtct ctgcgattcg gcgacaactg ccttgcgcaa
     3121 ctcgggattt ttcaatagat gcaacgccat tgaagcgact tcgttaatcg ttcggtcttc
     3181 gccgcacgtt ttggaaaacg caattcgttc tattgcgcca tcgcctccga cgcacgggat
     3241 tcggcagagc agagcgtccc ctgcaacttg acccggcaca tggctgtcgt cgagttgcaa
     3301 cacgatctta tgccgcgcca catcgcgcag ataatccggg taagtcttcc atttgtcgat
     3361 tagccggagt tttccttcgg gaaaatcgag ttcacctaac aatcgccggc ctttgtagcc
     3421 atcgaggtta acgacggtta ccggctcggc tgtcgctttc cacagctgcc gtgcgaccaa
     3481 gagcgcggcg aaatgattgc gcgatggcac gtcccattcc cgtgtgccaa cgaaaatgcc
     3541 agactgcgcg tcacgcggca tggaaaaatc ccatcgttga tcctcgatcg ggtagggggt
     3601 cggaataaac gccactgtcg cgggatcgtg tttggagcgg acgcgctgat aaatttccgc
     3661 ggcctcgggc gtcgtggcga tgcaagcatc ggcttgcgtc acaattttta tgaagcgcaa
     3721 taacttcgcc gggtcccgca actgttgtgc gatttggtgc agcccggttt ccttaaatga
     3781 aacagcgacc atgcgacctt cccgttttaa cgcagtcaat gcgcgctctg acgcgcgaaa
     3841 atcgctacgc aaaagcagaa gcacaggtgt cttttcagcg agggcactgc gcgcatcgcg
     3901 atggaacgcg ccaaatgagc acgcagcgaa agcatgaaaa ttgatcggtg gatgagagcc
     3961 ttcgccagga tcgggcacgc tatgaaattg ctgttcggga tcgcgtcctc cgggattgag
     4021 aacagttagc cgaaactctg tgtgttgaga agtcatcact taccgaacta ctagacatct
     4081 gataacggcc attccgagcg cagtcgagaa atcctgtggc ataacgttca ggtgctttcg
     4141 cgggatgtct cgactgcgct cgacatgacc gcccgattaa caatctcgcc ttactcgtgg
     4201 aggtcgcccg gcggctgcgc tgcggatctc aatagcgtgc gttccgtgtc ttcttgatcg
     4261 agcggtttta ccggtatcgc acgccgaatc tctgatggtt gccgttcctg cggttggacc
     4321 gggatcgctt ccggaatcgt ttggacgggg acggcctttc gaatctctgg agcggattgt
     4381 gtcgttaggc tcgcgttgtt acttgcggcc ttcacctcat tcgcgccagt tgcagtgtca
     4441 ctcttctgag cttcggcggt ttcggtagct ggctgcggcg ttgtgtccgg catgactgtt
     4501 ggcttgatcg agtcatacgg gtcgtcgtcg gctatgaggg tgggactttt tatggcgacc
     4561 ggcatgactt cactcaggtt cacagccagc tcagcgcgcg gcaaatcgct ggaaccaaat
     4621 tcgcgcgcga ggcgggcgcg cggttcaccg tggatgttgc agagttccgt gggcgcttgt
     4681 gcctgtgtcg caatctccat gtaagtgcta cgacgttgga ctgtatcgcc gttagcggat
     4741 ttcactgcgt cataacattt gtccgtagcc agttgccctg atcttgagca aatctcgatc
     4801 tgcttaagac tggatggtgg tttg
//
LOCUS       DATDAJ010000039         4664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_211814, whole genome shotgun sequence.
ACCESSION   DATDAJ010000039 DATDAJ010000000
VERSION     DATDAJ010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211814"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..500)
                     /locus_tag="VIS53_00885"
     CDS             complement(24..500)
                     /locus_tag="VIS53_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY5766365.1"
                     /translation="MNTGPVTAFAEIPTTETRGDAERLSHIILEMQRCFLLHLSKELA
                     PGNVSFPQFFLLAYLDRKEVLSMSEIAKKMGHTTAAASGLVARLENLRYVMRSAARDD
                     RRKVMVCITPKGSALVRRIREEMVGNVTKILNHLTSDEQKAWLHIYSKIYDYCQSK"
     gene            complement(624..1904)
                     /locus_tag="VIS53_00890"
     CDS             complement(624..1904)
                     /locus_tag="VIS53_00890"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEY5766366.1"
                     /translation="MIGVISEEEARKRILQNVSPLEEQAVPLAGALDCFAAQDYFAQV
                     PLPAFDNSAMDGYAVVANCCKKGKRLRVTGEQPAGPDRGLRVSDGEAVRIFTGATLPQ
                     GADAIVMQEDVTRHGTEISVNVDVEAGEFVRRRGCDLAEGQMILARGERIRAATIALL
                     ASQGFADVIVGGKPTAAVISTGDELVKPGEKLQAGQIYDSNSVLLNALLLRCGVGATA
                     VEHCRDDRQSLRDAIKRGMKNHLLIISGGVSVGEHDLVKEVLRELGAKIEIWRVAVKP
                     GKPFLFGRAPQSSPSPQSSQRSAQSRAQPRTRSAGEDSVFGSNCLIFGLPGNPVSAFV
                     TFLQFVRPAILRMMGATNLDLPQVPAKLTVGLTNDGDRPHYIRGRLEHEKFTPIGRQE
                     SHALFGLSQANALLRVAVGQSLKANGIVDVQIWD"
     gene            complement(1906..2163)
                     /locus_tag="VIS53_00895"
     CDS             complement(1906..2163)
                     /locus_tag="VIS53_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766367.1"
                     /translation="MTTDASREYREESGIANLSVQFVATGLDNMAASPEFRTQCFGVR
                     CVFASLSAHCDADCQKRREDVLALLKLRKNQQYYLPFSSAI"
     gene            2228..2315
                     /locus_tag="VIS53_00900"
     tRNA            2228..2315
                     /locus_tag="VIS53_00900"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2262..2264,aa:Ser,seq:gct)
     gene            complement(2343..>4664)
                     /locus_tag="VIS53_00905"
     CDS             complement(2343..>4664)
                     /locus_tag="VIS53_00905"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HEY5766368.1"
                     /translation="VHRDIKPSNILANAEGEPKLLDFGIAKLLAKDEDAAQLTAEAQQ
                     HLTPICASPEQAKGDPITVATDIYSLGALLYEMLSDQKPHRFSTARPTREELALVVGE
                     QVPPPPSAVASDAKTARLLRGDLDAIVLFAMQKEPGMRYATVADLADDIRRHLVRKPV
                     VARHPTLGYRAKCLIKRNGSRLVASAAIVIVLSGVLFGFLARSQQNAREAAGMPVRRA
                     SAPALDIRKSIAVLPFENLGDNSSPSYFADGVQDNILTDLGKVGDLKVISRSGVAPYR
                     GKNRNMKQIGRDLSVANVLEGSVQISGDRVRINAQLIDTQTDTQIWAEQYDRKLEDIF
                     ALQSELAQTIAAQLKATLSTGEKAEIWRQPTQDLQAYDLYLRARAAFRGGGGPMTRDN
                     WNTAVNLLNTAIARDPKFTLAYCLLNEVYVLQYRFGDDHSPQHLAAAKEAAETALRLE
                     PNREEARLALARYYYHGLSDYRRTEQELSNIPPSAPHEVEFFTLASLVERRLGQFEAS
                     IRNGEKAVELDPQNGPLATSLVQTYSGLRRFGDSERVANAAIARLHGPKPRLLIVKNE
                     SALGMGNVEEARAALDSIQNKDDRDYQAARLWLYLIERDYRGAEAFAAKATDETKRMP
                     DFWLTLAAVAHAAGNVDEERQANAEAKRSALLALVPRPDDPNLLGQLSVAEAGLGENK
                     DAIRHARQAAEILPPSVDAVLGPSCEMRLAQVLAMTGDRDGAFDKLGKLVKLPFCLTS
                     GDLKLNPMWDDLRNDPRFDRILAESALPLATNR"
BASE COUNT         1000 a         1368 c         1266 g         1030 t
ORIGIN      
        1 cattcccgcc aaccaaagca aaatcatttc gactggcagt agtcgtaaat tttgctgtaa
       61 atgtgcagcc acgccttttg ctcgtccgat gtgaggtgat tcagtatttt cgtaacgtta
      121 ccaaccattt cctcacgaat tcggcggacg agagcagagc ctttcggcgt gatgcagacc
      181 atcactttgc ggcggtcatc tcgcgcagcc gaccgcatca cataccgaag attttccagg
      241 cgcgccacga gaccgctcgc tgcggccgtg gtgtgcccca ttttcttcgc gatctcggac
      301 atgctgagca cttccttgcg gtcgagatat gcgagaagaa aaaattgcgg gaacgaaacg
      361 ttgccaggtg cgagttcctt ggacaggtgc agcaggaaac agcgctgcat ttccaaaatg
      421 atgtgggaaa gccgttcggc atccccacga gtttcagtcg tcggaatttc tgcaaacgcg
      481 gtaaccggtc ccgtgttcaa ggcgataaag ctagaaacgc gcacgcaacc tgtcaatcct
      541 gcccggcggt ttggagtgcg gcgacgcgtc gccgctttca aagcgcagac atatctgcgc
      601 actccaaatg caaggcgcgc ccctcaatcc cagatttgga catcaacaat tccatttgct
      661 ttcagcgact gaccgaccgc gacccgtagc aacgcatttg cctggctcaa accaaaaagc
      721 gcgtgggatt cctgacgacc gatgggcgtg aacttttcgt gttcgagtct cccgcggatg
      781 taatgcggtc gatcgccgtc gttcgttaga ccaaccgtca acttcgcggg gacctgcggc
      841 agatcgaggt tcgttgcgcc catcattctc aaaatcgccg gccgaacgaa ctgtaagaac
      901 gtcacgaacg ccgacacggg atttccgggc aggccgaaga taaggcagtt agagccaaaa
      961 acagaatcct caccggcgct tcgcgtccgg ggctgggctc gcgactgggc ggagcgctga
     1021 gaggattgag gtgagggtga gctctgcggc gctcggccaa ataaaaatgg ctttcccggc
     1081 ttaaccgcca cgcgccagat ttcgatcttc gctccgagct cccgcaatac ttccttgact
     1141 aaatcgtgtt ctccgaccga aacgccgccg ctaatgatga gaaggtgatt tttcattccg
     1201 cgcttaatcg cgtcgcgtaa cgattggcga tcatcgcgac aatgttccac cgctgtcgcg
     1261 cccacaccgc accggagcag gagcgcattg agcaacacgg aattgctgtc gtaaatttgg
     1321 cccgcctgaa gtttttcgcc tggtttcacc agctcgtcgc cggtggaaat gactgccgca
     1381 gttggtttgc cgccaacgat cacgtctgcg aaaccctgcg acgccagtaa agcaatcgta
     1441 gctgcgcgga ttcgttcgcc tctagctaaa atcatttgcc cttccgccaa atcgcacccg
     1501 cgacggcgta cgaactcgcc agcttcgacg tccacgttca cgctgatttc agtgccgtga
     1561 cgcgtcacat cttcctgcat cacaatcgcg tctgcccctt gcggtagcgt tgcgccagtg
     1621 aaaatccgga cggcttcgcc atcactcacg cgcagccccc gatcaggacc ggcaggttgt
     1681 tctccggtca cgcgcagccg cttgcctttt ttgcagcagt tcgccacgac tgcataaccg
     1741 tccatagccg aattatcgaa cgcgggcagg ggaacctgag cgaaataatc ctgggctgca
     1801 aaacaatcga gcgcgcctgc gagtggaact gcttgttcct ccagcggact gacgttctgc
     1861 aagatccgtt tgcgcgcttc ttcttcgctg atcacgccaa tcatttcaaa tggccgacga
     1921 aaatggcaaa tagtattgct gatttttgcg aagctttagg agtgcgagca cgtcctcgcg
     1981 ccgcttttgg cagtcagcat cgcaatgtgc ggaaagcgat gcgaagacgc atcgcactcc
     2041 aaagcactgc gtgcgaaatt cgggagatgc cgccatgttg tccagcccgg tagctacaaa
     2101 ctgaacgctg aggttggcaa tccctgattc ttcgcgatat tctcgactcg cgtcagtagt
     2161 cacgcgcctg cgccatcccg cagccttgaa gcgaaggcag gtggcgctac ccgtggctac
     2221 aaattttggt gaggtggctg agtggtcgaa agcagcgctt tgctaaagcg ccgtagccca
     2281 aaaggctacc gagggttcga atccctccct caccggtccc ttttgtgatg catggaccga
     2341 cgtcagcgat tggtcgctag aggcaaagca gactccgcca ggatacgatc gaagcgggga
     2401 tcgttccgaa ggtcatccca catgggattc aatttcaaat cgccggaggt cagacaaaac
     2461 ggcagcttca ccagtttgcc taatttatcg aaagcgccat cgcgatctcc cgtcatggcg
     2521 agcacttgcg cgagacgcat ttcacaggag ggaccgagaa ctgcatccac gctcggcgga
     2581 agaatctcgg ctgcctgacg tgcatgacga attgcgtctt tgttctcgcc gagcccagct
     2641 tcggcgaccg atagttgacc aaggagattg gggtcatctg gccgcggcac gagcgccagg
     2701 agtgcagagc gctttgcctc cgcgttggcc tgacgctcct cgtctacgtt acctgccgca
     2761 tgagcaactg ctgccagagt gagccagaaa tccggcattc tctttgtctc gtcggtcgcc
     2821 ttagcggcga aggcttcggc gcccctgtaa tctctttcga ttaagtagag ccagagtcgc
     2881 gcggcctggt aatccctgtc atccttattc tggattgagt cgagcgcggc acgcgcttct
     2941 tctacattcc ccatcccgag tgccgattcg ttcttcacta tcaaaagtcg cggttttggt
     3001 ccatgcaggc gcgcaatggc tgcgtttgca acgcgctcgg aatcgccgaa ccgtcgcaac
     3061 ccggaatacg tctgtacgag actggtagcg agcggcccat tctggggatc aagctcaacc
     3121 gctttttcgc cattgcgaat cgatgcctca aattgcccca aacggcgttc gaccaacgaa
     3181 gccagggtaa agaactcaac ttcatgaggc gcggaaggag ggatattcga caattcctgc
     3241 tccgtccggc ggtagtcgct caagccatga taatagtatc gagcaagagc aaggcgtgct
     3301 tcttcgcgat ttggctcgag ccgtagcgct gtctccgctg cctctttcgc ggcagcgaga
     3361 tgctgcggcg aatgatcgtc tccaaaacga tattgcaaga cgtaaacctc attgagcagg
     3421 cagtaggcga gagtgaactt ggggtcccga gcgatcgccg tgttgagaag attgaccgct
     3481 gtgttccaat tatcgcgcgt cataggtcca cctccaccgc ggaaggcggc gcgagcgcgg
     3541 agataaagat cataggcttg caaatcctgc gtgggttgcc tccaaatctc agccttttca
     3601 ccggtggaga gggttgcctt gagttgggct gcgatcgtct gcgcgagctc actctggagc
     3661 gcgaaaatgt cctccaattt gcgatcgtat tgctccgccc aaatctgggt gtccgtctgg
     3721 gtgtcgataa gttgcgcgtt aatccgcacg cgatcgccag aaatttgcac gcttccctcc
     3781 agcacgttcg caacactcag gtcgcgcccg atctgtttca tgtttctatt cttgcccctg
     3841 tagggtgcga caccactgcg gctgatgacc ttcagatctc ccactttgcc cagatcggtc
     3901 agaatattat cctgaacacc atcggcaaaa tatgacggag agctgttgtc acccaggttt
     3961 tcgaagggca ggactgcaat acttttccgg atatccaagg ctggcgcact ggctctgcgc
     4021 accggcatgc ccgccgcctc acgggcattt tgttgcgacc gagccaaaaa cccgaacaga
     4081 actccggaca acacaatcac gatagccgcg ctcgccacga gacgtgatcc atttcgcttg
     4141 atcagacact tcgcgcgata accaagagta ggatgacgcg cgacaaccgg ctttcgcacg
     4201 agatgacggc gaatatcatc cgcgagatct gctactgtgg cataacgcat cccaggttcc
     4261 ttctgcatcg cgaacaggac gatcgcgtcg agatcaccgc gcaacagccg tgcagttttc
     4321 gcatcagaag caaccgcact tggcggcggc ggaacttgct cacctactac caaggccagt
     4381 tcctcacgcg tgggacgggc agtggaaaac cggtgcggct tttggtcgct caacatttca
     4441 taaagaagcg cgcctaacga gtaaatgtca gtcgcgactg ttatcggatc tccttttgcc
     4501 tgttcgggcg acgcgcaaat gggtgtcaga tgctgctgtg cctcggcagt caattgcgct
     4561 gcgtcttcgt ctttcgccag gagcttggca atgccgaaat cgagcagctt cggttctccc
     4621 tctgcgtttg ccagaatgtt gctcggcttt atgtcgcgat gaac
//
LOCUS       DATDAJ010000040         2416 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_214082, whole genome shotgun sequence.
ACCESSION   DATDAJ010000040 DATDAJ010000000
VERSION     DATDAJ010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214082"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..732
                     /locus_tag="VIS53_00910"
     CDS             <1..732
                     /locus_tag="VIS53_00910"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY5766369.1"
                     /translation="AQERLRSTIFDLATRNPMALFGSDQVIDQFPGRRIYVGKKDGNK
                     LENITVFEMNEKSLPVKITYARTGMLEADLANKQILMHLYGARYQERDSKDPFNLRKI
                     RDGINMVEGTLPISLEELYEKEKKRPSRSALSIEQLLEQLKSENTRERSASRTEINKR
                     FSFPFACVAFAIIGVPLGVTAHRRETSIGFAMGLIVATSYFLFVIIGDTLRANPHAHP
                     ELLVWFPNVLFIVLGTFLFRRLARQ"
     gene            complement(1024..1308)
                     /locus_tag="VIS53_00915"
     CDS             complement(1024..1308)
                     /locus_tag="VIS53_00915"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEY5766370.1"
                     /translation="MPKYVIEREIPGAGQLSREQLQAISQKSCGVLSNLGPQIQWVES
                     YVMDDRVYCVYIAANEELIREHARQGGFPANRISEVRAIIDPTTAESPAR"
     gene            complement(1395..>2416)
                     /locus_tag="VIS53_00920"
     CDS             complement(1395..>2416)
                     /locus_tag="VIS53_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766371.1"
                     /translation="ILPFYLFAAFVALKNRWLWCGCLLALGAMFKGQLLFVTPFFLLW
                     PLCQKRWVNALRMLAGFTGPAAIIVSPWLLRTTGAWVAFAAVAGVSLLVVLRHKLPHK
                     GAWFAGILGCAAFLIGAFTGGSFAWFEIGFLYGTKHYPYLFISSCYNLASLLAPAGWS
                     LKDDLLSAHVGSVHFHLTLQWALRLFFLGAVALCARGAVRHLRNRDTRVLIAITAPWL
                     LMFALLGQMQERYLVWGAVVSAVALGVSVRLSIIHFIISAASTAMIVHAMLVDKKLDP
                     TLRAIDVLHGIRPYASVLVLVCVALYFWDALGWRIPAFRRRAVKTATAPSLSLGPAGG
                     SLNLR"
BASE COUNT          599 a          673 c          656 g          488 t
ORIGIN      
        1 gcgcaggaga gattgcgcag taccattttt gatctcgcta cgcggaatcc catggcgctt
       61 tttggcagcg atcaggtcat cgatcagttt cccggccgga ggatttatgt cggcaaaaag
      121 gacgggaaca aactcgagaa cattaccgtg ttcgaaatga acgagaagtc gctaccggtg
      181 aagatcacgt acgcgcgcac tggtatgctc gaggcggatt tggcgaacaa acaaatcctg
      241 atgcatttgt atggcgctcg ttaccaggag cgcgactcga aagacccgtt caacctccgc
      301 aagatccgcg acggcatcaa catggtggaa ggcacgttgc ctatcagcct cgaagagctg
      361 tacgagaaag agaaaaaacg gccgagccgt tccgctctgt caatcgagca actgctggag
      421 caactcaaaa gcgagaacac acgggaacgc agcgccagcc ggacggaaat caacaaacga
      481 ttttcgtttc cgttcgcgtg cgtggctttt gcgatcattg gcgtgccgct gggtgtaact
      541 gcgcatcgcc gtgaaacatc aattggcttc gccatgggcc tgattgttgc cacgagctat
      601 tttctgttcg taatcattgg cgatacgttg cgagcgaatc cacatgcgca cccggaactg
      661 ctcgtctggt ttccgaatgt tctgtttatc gtgctcggca catttttgtt ccggaggctg
      721 gcgcggcagt agacgggcaa ttgagtgctt agcgccacgg gcgcgacgtt caatacaagc
      781 ctggggcatc gcctcgggtt tcggtgttgc cccaagcacc agcgctgaaa gcgcgcttca
      841 ctttcggcac cggggcatta gctgcgtgcc tttaccaaat cggtcgctag cttgactcac
      901 gcttttcagc gcttgacgcg atatgcgatt tcaattcctg ggcaatactc caggctagca
      961 tgagatagcg ccgattggcg ctaaggaacg aattgtgtgg cgttcttaac gagattgaaa
     1021 taatcacctt gccggcgact cggcagtggt cggatcgata atcgcgcgga cctcggaaat
     1081 ccggttcgcg ggaaaaccgc cctgacgggc gtgttcgcga atcagttcct cgttggccgc
     1141 gatgtaaacg caataaaccc gatcgtccat cacatagctt tcgacccatt gaatctgtgg
     1201 tccaagattg ctcagcactc cgcaggattt ctgcgagatg gcttggagct gttcgcgcga
     1261 gagttgtcct gcaccgggaa tttctctttc gatcacgtac ttgggcataa cgaatcttag
     1321 ctaaagcttg ccgaagccgg cgtcaattca ttccaggcaa tcagattcgc gattgcgggg
     1381 attgcgacac tgggctagcg cagattcagg cttcctccgg ctggtccgag cgagagcgaa
     1441 ggtgccgtgg ccgttttaac tgctcgccgt cgaaacgccg gaattcgcca accgagcgca
     1501 tcccaaaagt aaagagctac acaaacaagc accaacactg aggcgtacgg ccgaatgccg
     1561 tgcaacacgt caatcgcgcg cagcgtcgga tcgagctttt tatcgaccaa catcgcgtgg
     1621 acgatcatcg ccgtgctcgc agctgagatg atgaaatgaa taatgctcag ccgaacactg
     1681 acgcctaacg cgacagcgct caccactgcg ccccacacga ggtagcgttc ctgcatttga
     1741 ccgagcagcg cgaacatcag caaccacggt gcagttatcg caatcagcac gcgtgtatcg
     1801 cgatttcgta gatgtcgcac cgcaccgcgc gcacacaatg ccactgcgcc caggaaaaac
     1861 agacgcaacg cccattgcag cgtgagatga aaatgcaccg atccgacatg agctgacagc
     1921 aaatcatctt tcagggacca accagccgga gcgagtaggg atgcaagatt gtaacaagag
     1981 ctgatgaaaa gatacggata atgcttggtt ccatagagaa aaccgatctc aaaccacgcg
     2041 aaacttccgc cagtgaatgc gcctattaga aacgcggcgc accccagaat tccggcgaac
     2101 cacgcgcctt tgtgcggcaa cttatgtcgc aagacgacca ggagactcac gccagctaca
     2161 gcagcgaacg cgacccaggc cccggtcgtt cgcagaagcc atggtgaaac tattatcgct
     2221 gcgggtcccg tgaacccggc tagcatgcga agcgcattca cccagcgttt ttgacatagt
     2281 ggccaaagga gaaaaaacgg cgtcacgaat agcagctgtc ctttgaacat tgcgcccaac
     2341 gccagcaaac atccgcacca gagccagcga ttttttaaag cgacgaacgc ggcgaagaga
     2401 taaaacggca ggatcc
//
LOCUS       DATDAJ010000041         9858 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_216288, whole genome shotgun sequence.
ACCESSION   DATDAJ010000041 DATDAJ010000000
VERSION     DATDAJ010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9858
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216288"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VIS53_00925"
     CDS             <1..537
                     /locus_tag="VIS53_00925"
                     /inference="COORDINATES: protein motif:HMM:NF015331.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY5766372.1"
                     /translation="PGSPHKEFKAVGPIDAPTRAVGAVIDDFENYPKFMPFTTECRLI
                     KQDDDTMIGYQRLSPKICADRDYTLRVSKKSLPVRDGVVYTSRWSPANELGPPEKKGV
                     VRVKICEGSWRLDPEGPAKTLATYSIYTDSGAPLPAFIDKQVSLTGIRRLFAAVRKQV
                     KEPKYAAASQASPAPARP"
     gene            583..2724
                     /locus_tag="VIS53_00930"
     CDS             583..2724
                     /locus_tag="VIS53_00930"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY5766373.1"
                     /translation="MRANFFLSLAATAGAFTLNTTLAGSAPDTPKKPVATEYHGVTVE
                     DPYQWLEADDDSQVKAWSDAQNQQTRKNLDSFPDRAAIEKQLQEWYAKTSPSYSSLVS
                     RPGILFAMKFQPPKQQPLLVTLASADDLKSEKVVLDPNVLDTKGTTAIDWFVPSLDGK
                     YVAMSLSKGGSEDGTLHFYETATGKALPDTIAHVQYPTAGGSAAWNANGSGIYYTRFP
                     RKGERPDADLNFYQQIYFHKLGTPDTKDTYSIGKDFPRIAEIALAASRDGKYILATVA
                     NGDGGDFAHYLLGPDGTWKQITQFSDQIKLARLGRDNALYLLSRADAPRGKILRLPLD
                     VPELKNAAEIVGSGEAVIEQIVPGTDALYVADLLGGPSQIRRFDLNGKNETTISTPQI
                     SAVQELLALEDGSLLFRDVSYTDPATWFHCLNGKTEPVKTALQSTSPVSFADIEVRRE
                     FATSKDGTKIPLNILSRKGMKRDGNNPTLLYAYGGYGISMSPNFDFTRRLWFDRGGVY
                     VVANIRGGGEFGEEWHKAGNLTKKQTVFDDFAAAAEYLVKENYTRPGKLAIQGGSNGG
                     LLMGAMITQHPDLFHAVVSSVGIYDMLRVELAPNGAFNVTEFGTVKNPEQFKALYAYS
                     PYHHVVDGTKYPAVLMMTGANDGRVAPYHSRKMTARLLAANKSENPILLRTSSSAGHG
                     IGTALSERIKQSADIYAFLFGQLGMAGKRGD"
     gene            2779..4116
                     /locus_tag="VIS53_00935"
     CDS             2779..4116
                     /locus_tag="VIS53_00935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766374.1"
                     /translation="MQRKLLILAAAIGIFFLLVIAAGVAVFFSPLLTRYVGGEAFRVA
                     MEDETAKGLHFPQARYAPIRRTGALTAQSDSFKSDNGQKAMKSLDAHGITAKFDPWGV
                     FLRQWRFTDVRVQSGDVEIQIYEANPEAVHGKPWFAIFLPNRVYLAKIQSEQANVTWR
                     FRGERAGFFGTQLLITPNGRDFEYVATGGRLKMAVVPDLDLRRTHILITKTLLTLYDL
                     DLASDSRSDESIQAQGHAGLGQDKSIDVRANFNSVPIRQWLPAEWKGRLKGSAFGDVH
                     WTGKDPKLESSSGEGSLRIHKGRVDDVPLLNKLAELAQKKSFERLDLDECSLGFAWRY
                     PETDIKDIIIEEKGKFRIEGEISVKRRLLRGTIKLGLTREYLDWLPNAEEVFTRRSSG
                     YLWTDVRLSGTIDEPRQDLSQRIIELFKESPGAYLGLLFRQLGDWLKKTFGGE"
     gene            complement(4236..5504)
                     /locus_tag="VIS53_00940"
     CDS             complement(4236..5504)
                     /locus_tag="VIS53_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006984027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5766375.1"
                     /translation="MKAGFLEKLIERLGRIGPEDVQNYFLRLAQEKGFLETVFNAIQE
                     GIIVTDSKGRITYLNDAACGLFGLEAGEAIGKRLDERIGGLDWESLTRSGGPVSHDME
                     IFYPQNRFINFYVVPLVMEQRESPVAGGGLSAVALAKGDDSGQPAPTIPTTPEEVGHV
                     IILRDITESRRTAQQTIESERLNALRLLAAGVAHEIGNPLNSLHIHLQLMERSVQKLH
                     DGEKAELEQSIDVALSEVNRLDSIVTQFLKAVRPSRPQLRPENVNMIVEEAVRFFMPE
                     LQDREIVVEQELRSDLPLLQLDRDQMKQAFYNVIKNSVEAMHRHGTLRIRTDLADTHV
                     IVRFVDSGGGMSAENLSRAFEPYFTTKSSGSGLGLLIVRRIVREHGGELSIESSQGRG
                     LTVTIRLPFIDRRIRMLEAGEARDQGSEDR"
     gene            complement(5576..6619)
                     /locus_tag="VIS53_00945"
     CDS             complement(5576..6619)
                     /locus_tag="VIS53_00945"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY5766376.1"
                     /translation="MSGTDGVKWGERVMITPVRVSYAVLAATIILAGILHLGAPLLVV
                     LFSYFALRQLYSFTRRKWLALALFIIAVVGIGGAGVYFTRAAILALPDVADTSIPSAS
                     AWAQKRSIELPFTDFESLRQVVVSTLGEEANYLRNVANVAKATTTHVVFSILGIVAAA
                     SLFFKTGLDPYRGTHRVKNNLYSICCDQVSRRFRDFYRSFATVMGAQITISLINTALT
                     AIFLLAVRMPHAPLLIAVTFLCGLVPIVGNLVSNTIIVFVALTMSVKLAISALVFLIV
                     IHKLEYLLNSKIIGDRIRNPVWLTLIALILGERLMGIPGLILAPVVLNYLRVEMLTVE
                     VPARHEEVEVLSR"
     gene            complement(6710..8881)
                     /gene="pnp"
                     /locus_tag="VIS53_00950"
     CDS             complement(6710..8881)
                     /gene="pnp"
                     /locus_tag="VIS53_00950"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY5766377.1"
                     /translation="MQQKVTAKIGGNEISIETGKIARLADGAVIVTCGDTTVLVSAVS
                     ALAIKEGQDYFPLTVDYREKAAAVGKFPGGYFKREGRPTEKETLTSRMIDRPLRPLFP
                     KGYFYDTQIISILLSADGQNDPDILAINGASAALCISDIPFAGPIGAVRVGRVNGEFV
                     ANPTHDERAQSDLDLIYVGTENEVIMIEGSAKEMPEAEFTKALEFAHGHAREMIQAQK
                     DLASRVTKPKRDVQLLHVNQEMVDIARQVAGDRLEQVLRTEGKSARTKAIGALREEVK
                     TAILQKFPEADSFAISQAFEFVEKKMFRASILEKQQRVDGRGYHDLRPITCEVGVLPR
                     AHGSSIFQRGETQALALATLAPIEEAQMIDAYGGGEQSKRFILHYNFPPFSVGETGRT
                     GGPGRREIGHGALAERSLEPVVPSENDFRYAIRISSEIMESNGSTSMASVCGGMLALM
                     DAGVPMKDMVAGISVGLVTEAGDDGQLKRYELLTDIIGSEDHYGDMDFKLCGTDAGVT
                     GFQLDLKLPGVAHNIMTEAIQRAKEARTKILEIMRSTLDQPRTELSKYAPRIETIKIN
                     PEKIGALIGPGGKTIKGIVAETGAEINIEDDGSVHIYATTGESMARAKEIIGGMTREI
                     EIGQTYQGRVVTTKEFGAFVEVFPGKDGLVHISELADFRVKRTEDVVKIGDMIWVKCI
                     GIDDKGRVKLSRKAALKERAEKETGQVLEPIAERDVSNDAL"
     gene            complement(9063..9326)
                     /gene="rpsO"
                     /locus_tag="VIS53_00955"
     CDS             complement(9063..9326)
                     /gene="rpsO"
                     /locus_tag="VIS53_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEY5766378.1"
                     /translation="MAESNQTSDLKEFQLHDKDTGSADVQVALLTHRIEHLTEHLKIN
                     QKDHSSRRGLLKMVAQRRSLLDYLSKTEADRYKNVIEKLNLRK"
     gene            complement(9406..>9858)
                     /locus_tag="VIS53_00960"
     CDS             complement(9406..>9858)
                     /locus_tag="VIS53_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766379.1"
                     /translation="DTRINRGHVSEGIAALEGGYTGGSARVAMDGFVPFWGRMLLRGF
                     SSVYFGLNLGAGAFLFTTRRNFDVIGGFDEQYFAGEEVYFSLELKKLGRFKVLREPVV
                     TSGRKLRMYPAKQFLREFFGAIVRGPRGVRSRAKLSLWYDGKRERHPA"
BASE COUNT         2260 a         2758 c         2614 g         2226 t
ORIGIN      
        1 ccaggttcgc cgcacaagga attcaaagca gttggcccga ttgacgcgcc aactcgtgcc
       61 gtgggcgctg tgatcgacga tttcgaaaat tatccaaagt tcatgccttt caccacggaa
      121 tgccgactga ttaaacaaga tgacgacacg atgattgggt atcagcggct ctcgccgaag
      181 atttgcgcag atcgtgatta cacactgcgc gtttcgaaga agtcattgcc cgtacgggat
      241 ggtgtggtct atacgagccg gtggtcacct gcgaatgaac tcgggccgcc ggaaaaaaaa
      301 ggtgtagtgc gcgtaaaaat ttgcgagggc agctggcggc ttgatcccga aggaccggcc
      361 aaaacacttg ccacgtattc catctacacg gatagcggtg cccctttgcc agccttcatc
      421 gacaaacagg taagcctgac tggaattcga agattgttcg cggccgttcg caaacaggta
      481 aaggagccaa agtacgcggc ggcttcgcag gcgtcaccag cgcccgccag gccctagcaa
      541 aatctttttc gcgagtaacg cgcgcaagta ttgtctcttc gcatgagagc gaatttcttc
      601 ctgtctctag ccgcgaccgc cggtgcgttt acgctcaaca cgactttggc cgggagcgcg
      661 cccgacactc caaagaaacc agttgccacc gaataccatg gagtaaccgt ggaagatcca
      721 tatcagtggc tcgaagcgga cgacgactcg caggtgaaag cgtggtcgga cgcgcagaac
      781 cagcagacac gtaaaaatct cgacagcttc cccgatcggg ccgcgattga aaaacagtta
      841 caagagtggt acgcgaaaac ttcgccgagc tattcctcgc tcgtctcgcg gcccgggatc
      901 ttgttcgcga tgaagttcca gccgccgaaa caacaaccgc tgttggtgac gctcgcgtcg
      961 gcggacgatc ttaagtcgga aaaagtggtg ctcgatccga acgtcctcga cacgaaaggc
     1021 acgaccgcga tcgactggtt tgtaccgtcg ttggacggca aatacgtcgc catgtcactt
     1081 tccaaaggtg gcagcgaaga cggaacactt cacttttacg aaactgcgac aggcaaagca
     1141 ttgccggaca cgattgcaca tgtccaatat cccacggcgg gcggcagtgc ggcttggaac
     1201 gcgaatggct cgggcattta ttacacgcgt tttccccgga aaggcgagcg gccggacgct
     1261 gatctgaatt tttatcagca gatttacttt cataagctcg gcacgcccga cacaaaggac
     1321 acatattcga ttggcaaaga cttcccacga atcgcagaga tcgcgctcgc agcttcccgc
     1381 gacggcaaat acattctcgc gactgtagcg aacggcgatg gcggggactt cgcgcattat
     1441 ctgcttgggc cagatggaac atggaagcag atcacgcaat ttagcgatca gataaaactc
     1501 gcgcgtctcg ggcgggataa cgcactttat ctgctttcgc gtgcggatgc gccgcgcgga
     1561 aagattcttc gtctgccgct cgatgtgccg gaattgaaga atgccgcgga gattgttggt
     1621 tccggggaag cggtgatcga gcagatcgtg ccaggcacag atgcgcttta tgtggcggat
     1681 ctgctcggag gaccatcgca aatccgacgc ttcgatttga atggtaaaaa tgaaaccacc
     1741 atctcgaccc cacaaatctc tgctgtgcaa gaattgctcg cgctcgaaga cgggtcgctc
     1801 ctgttccgcg acgtgagcta taccgacccg gcgacatggt tccattgtct caatgggaaa
     1861 accgagccgg tgaagacggc cctgcagagc acgtcccctg tctcatttgc tgatattgaa
     1921 gtgcggcgcg agttcgccac ttcaaaagac ggcacgaaaa ttccactcaa catcctttct
     1981 cgaaaaggaa tgaagcgcga cggaaacaac ccgacgctgc tctacgcgta cggcggctac
     2041 ggaatcagca tgtcgcccaa ctttgatttt acgcggcggc tttggttcga tcgcggcggc
     2101 gtttatgtcg ttgcaaacat tcgaggcggc ggcgagttcg gcgaagaatg gcacaaggct
     2161 ggcaatctca ccaaaaaaca gactgtattc gacgattttg cggcggccgc ggagtacctc
     2221 gtcaaagaga attacacgcg cccaggaaag ctggcgattc aaggcggaag caacggcggc
     2281 ctgttaatgg gcgcgatgat cacgcagcat cctgatttat tccatgcagt agtttcctcc
     2341 gtgggcattt atgacatgct gcgcgtggaa ctggcgccga acggtgcatt caacgtcacc
     2401 gagttcggca cagtgaaaaa ccctgagcaa ttcaaggctc tttacgctta ctcgccgtat
     2461 catcacgtag tggacggaac gaaataccct gccgttctaa tgatgaccgg cgcaaacgat
     2521 ggacgcgtgg cgccgtatca ctcccgcaag atgaccgcgc gcctgcttgc cgcgaacaag
     2581 tccgagaacc cgattctttt gcgaaccagc tccagcgcgg gccacggcat cggcaccgca
     2641 ttgagcgagc ggatcaaaca gtcagccgac atttacgcgt ttctgtttgg gcaactcggg
     2701 atggcaggca agcgaggcga ttagttacaa gtgttacaag cgatcttgta actgttgcaa
     2761 cgacgtatcc tggtgccttt gcaaaggaaa ctgctgatcc ttgccgccgc gattggaatt
     2821 ttctttttgc tcgtaattgc agctggtgtg gcggtctttt ttagtccgct gctcactcgt
     2881 tacgtgggag gtgaggcttt ccgtgtcgcg atggaggacg aaacggcgaa agggttgcat
     2941 tttcctcagg cgcgttatgc accgattcga cgcaccggcg cgctcacggc gcaaagcgac
     3001 agtttcaaat cggataatgg acagaaggcg atgaagtcac tcgatgctca cggtatcacc
     3061 gccaaattcg atccgtgggg cgtgtttttg cggcaatggc gcttcaccga tgtgcgtgtg
     3121 caatctggcg acgtcgagat tcaaatctac gaagcgaatc ctgaagcagt gcatggtaag
     3181 ccgtggttcg caattttttt gccgaacaga gtttacctgg cgaagattca gtcggaacag
     3241 gccaacgtta cctggcgctt tcgcggcgag agagcgggct ttttcggaac ccaactgctc
     3301 atcaccccga acggccggga tttcgagtac gtcgcgactg gcggtcgact gaaaatggca
     3361 gtagttcccg atctcgatct tcgccgcaca cacatcctga tcacgaaaac gcttctgact
     3421 ctttatgatc tcgatctcgc atccgattca cgcagcgacg aaagcattca agctcaggga
     3481 cacgctggcc tcggtcagga caaaagcatc gatgtaagag cgaacttcaa ctcggtgccc
     3541 attcgccagt ggttgccagc ggaatggaaa ggccgtctca aaggcagtgc gttcggcgat
     3601 gttcactgga ccgggaaaga tccaaagctg gaaagttcat ccggcgaagg ttcgttgcgc
     3661 attcacaagg ggcgagtcga cgatgttccg cttttgaaca agctcgcgga gcttgcccaa
     3721 aaaaaatcgt tcgaacgtct ggatctagac gaatgttcgc tcggtttcgc gtggcgttat
     3781 ccggagaccg acatcaaaga catcatcatc gaggagaaag gcaaattccg gattgaggga
     3841 gaaatttccg tcaagcgccg gctgttgcga ggcaccatca aacttgggct tacccgcgaa
     3901 tatctggatt ggctgccgaa tgctgaagaa gtatttaccc gacgttccag cggctatctg
     3961 tggacggacg tgcgtctatc cggcacgatt gatgaaccca ggcaggacct cagccagcgc
     4021 ataatcgaac ttttcaaaga atcgcccggc gcttatctcg gcctcctttt tcgtcagctc
     4081 ggcgattggc tcaaaaaaac atttggcgga gagtgattgc gcgtaacaca ggcatcgtgc
     4141 ctgttcggtc gtgcatgctt ccagcttgca tggggagcag cacgtcgacg gctccgaagt
     4201 cgtcgttcct tggccgcgca atctgcactt actgactacc gatcttccga cccctgatcc
     4261 ctggcttctc ctgcttccaa catgcgaatg cgtctgtcga tgaatggcaa acgaatcgtc
     4321 acggtaagac ctctaccttg gctgctctcg atggagagtt cgccgccgtg ctcgcgcacg
     4381 atgcggcgta caatcaataa tccaagccca ctgccggatg atttggttgt gaaataaggc
     4441 tcaaatgcgc gactcaaatt ttccgccgac attccgccgc cgctatcgac aaatcggacg
     4501 atcacatgcg tatcggctaa atcagtccga atgcgcaacg tgccgtggcg atgcatggct
     4561 tcgacgctgt ttttgatcac gttgtaaaac gcttgcttca tctgatcgcg atcgagctga
     4621 agcaatggca ggtccgagcg caactcttgt tcaacgacta tctcgcggtc ctgaagctca
     4681 ggcatgaaaa agcgaaccgc ttcttcgaca atcatgttta cattttccgg ccgcagttgc
     4741 ggacgtgatg gccggacggc tttcaagaat tgcgtgacga tggaatccag cctgttgact
     4801 tcggaaagag cgacgtcgat cgattgttcg agctccgctt tttcaccgtc gtgcagcttt
     4861 tgcacactgc gctccatcaa ttgcaaatga atgtgcagtg agttgagcgg attaccgatt
     4921 tcgtgcgcga cacccgcggc caacagcctc aatgcattca aacgttccga ctcaattgtt
     4981 tgctgggccg tccggcggct ttcagtgatg tcgcgcagga tgattacatg cccaacctct
     5041 tctggagtag tcgggatcgt tggcgccggc tggccggaat catccccctt cgccaaggct
     5101 acggcggaca agccgcctcc ggctacaggc gattcgcgct gttccatcac cagcgggaca
     5161 acgtaaaaat tgatgaaccg attttgcgga tagaagattt ccatgtcgtg gctgactggg
     5221 ccgccgcttc gagtgagcga ttcccaatcg agacctccaa tgcgttcatc cagccgttta
     5281 ccgattgctt cgccagcctc gagtccaaat aagccgcaag ccgcatcatt caggtaagtg
     5341 attcggcctt tcgaatcggt cacgatgatg ccttcctgaa tggcattaaa aacggtttcc
     5401 aggaaacctt tctcttgcgc caggcgcaga aaataattct gcacatcttc cggcccgatg
     5461 cggccgaggc gctcgatgag tttttcaaga aaacccgctt tcataagctt aggtcatggt
     5521 tgaatgcgcg aagcgttgaa gcgttgcaac cgatgcgctg cgccgattta actgttcaac
     5581 ggctcaaaac ttcaacttct tcgtgccgag ccggcacctc cacggtcagc atttccacgc
     5641 gcaaataatt caatactacc ggcgcgagga ttaagcccgg gatccccatg agtcgttcgc
     5701 cgaggatcag agcgattaac gtgagccaaa caggattgcg aatccggtcc cctataatct
     5761 tgctgttcag caaatactcg agcttgtgaa tcacgatgag aaagaccagc gcggaaatcg
     5821 ccagctttac ggacatcgtc aacgcgacaa agacgatgat tgtattgctg acaagattcc
     5881 cgacgatcgg tacgagcccg caaagaaatg tgacggcaat gagcaacggc gcgtgcggca
     5941 tgcgaactgc cagaagaaag atcgcagtca acgccgtgtt gatgagagaa atggtgatct
     6001 gcgcgcccat gaccgtcgca aagcttcggt aaaaatcgcg gaatcgtctc gagacttgat
     6061 cgcagcaaat ggagtaaaga ttattcttca cccgatgcgt gccccggtag ggatcaagcc
     6121 cggttttgaa aaagaggctc gcggcagcga cgattccaag aatgctgaag accacgtgcg
     6181 tggtcgtggc tttggcaacg tttgcaacgt tgcgcaggta attcgcttcc tccccaagcg
     6241 tgctgaccac cacctgcctc agactttcaa aatcagtaaa cggcaactca atcgacctct
     6301 tctgagccca tgcgctggcc gaaggtatcg aggtatccgc cacatctggc aacgccaaaa
     6361 tggccgcgcg ggtaaaataa accccggcgc ccccaatccc aacaacagcg atgatgaaca
     6421 acgccagcgc cagccatttt cttcgggtga aagaatataa ttggcgcaat gcaaaatacg
     6481 aaaacaagac aacgagcagc ggcgcgccaa gatgaagaat ccccgccaga atgattgttg
     6541 cggcgagcac tgcgtaagaa actcgcaccg gggtaatcat gactcgctca ccccatttta
     6601 ctccatccgt gccggacatt gtcaactaga ccgtaccgcg gtgtacagtg cgctgtcttc
     6661 ggcccacggg gtttacgcga cctatagatc gaaaatcgcc gccgggcgat tacagcgcat
     6721 cgtttgaaac atctcgctcc gctattggct ccaaaacctg gcctgtttct ttttcagcgc
     6781 gttctttcag cgccgccttg cgcgaaagtt ttacgcggcc tttgtcatcg ataccgatgc
     6841 atttgaccca aatcatgtcg ccaatcttga ccacgtcctc agtgcgtttc acgcgaaaat
     6901 ccgcgagttc ggaaatgtgc accaagccat ctttgcctgg gaaaacttca acaaacgccc
     6961 cgaactcctt cgtcgtgacg acgcgtccct gataggtttg cccaatctcg atttcgcggg
     7021 tcatcccgcc gataatttct ttcgcgcgcg ccatgctctc gccagtcgtt gcgtaaatgt
     7081 gcactgagcc gtcgtcctcg atgttaattt cggcgccggt ttccgcgaca atgcccttga
     7141 tggttttgcc gccgggcccg atgagcgcgc cgatcttctc cggattgatt ttaattgtct
     7201 cgattcgcgg cgcgtatttc gacaactcgg tccgcggttg atccagcgtg ctacgcatga
     7261 tctcgagaat cttcgtacgc gcttctttcg cacgttgaat cgcttcggtc atgatgttgt
     7321 gagcgacacc gggtagtttc aggtcaagct gaaaacccgt cacgcctgcg tccgttccgc
     7381 aaagcttgaa atccatatcg ccgtaatgat cttcggaccc aatgatgtcg gttagcaatt
     7441 cgtagcgttt caattgcccg tcatcgccgg cctcagtgac caggccgact gagattccgg
     7501 caaccatatc cttcatcggc acgcctgcgt ccatcagtgc gagcattccg ccgcacacac
     7561 tggccatcga tgtcgagccg ttggattcca tgatctcgct ggaaatgcga atggcataac
     7621 gaaagtcgtt ttcgctcggc acgaccggtt ctagcgaacg ctcggccaac gcgccatggc
     7681 caatttcacg tcgtccaggc ccgcctgtcc gccccgtttc gccgacgcta aacgggggaa
     7741 aattgtaatg cagaataaag cgctttgatt gttcgcctcc gccgtacgca tcaatcatct
     7801 gtgcttcttc gatgggagcc agcgtcgcaa gcgcgagtgc ttgagtttcg ccccgttgaa
     7861 aaatcgatga gccatgtgct cgcggcagca cgcctacttc gcacgtgatc gggcgcaaat
     7921 cgtgatagcc gcgtccatcc acgcgttgct gtttttccag aatgctggcg cgaaacatct
     7981 tcttttcgac aaactcgaat gcctgagaga tcgcaaacga atctgcttcg ggaaattttt
     8041 gaagaatcgc agtcttgacc tcctctcgca gggcgccgat cgcttttgtg cgcgcgcttt
     8101 tgccttcagt gcggagcacc tgttcgagtc gatcgccagc aacctggcgg gcgatatcca
     8161 ccatctcttg attcacgtgg agcaactgaa cgtcacgctt tggtttagtc actctcgagg
     8221 ccaggtcttt ctgggcctga atcatctcac gcgcatgccc gtgcgcgaac tcgagcgctt
     8281 tcgtaaattc agcttccggc atttcctttg ccgagccttc gatcatgatc acttcgtttt
     8341 ccgtgccgac gtaaataagg tcgagatcgc tctgggcgcg ctcgtcatgt gtcgggttgg
     8401 ctacgaactc accgttaaca cgaccgacgc gcaccgctcc aatcgggcct gcaaaaggaa
     8461 tgtccgaaat acacagcgcg gcggaggcac cgttgatggc aagaatgtcg ggatcgttct
     8521 gcccatcggc gctgagcagg atcgagatga tctgggtgtc gtaaaaatat cccttcggaa
     8581 aaagcggccg caaaggccga tcgatcattc gcgaagtgag cgtttccttt tccgtaggac
     8641 ggccttcccg tttgaaatag ccgcccggga attttccgac ggcagccgct ttctcgcggt
     8701 aatcaacggt cagtgggaag taatcctgac cttctttgat tgccagggcc gaaaccgcgc
     8761 tgacaagcac ggtggtgtcg ccgcacgtga cgataactgc gccatcggcg agcctggcga
     8821 ttttgccggt ttcgatagat atttcattgc cgccaatttt ggcggtgacc ttttgttgca
     8881 taattatttt cctggattcg cggttccagg cggtcacctc gactgtaggt tttaaacccg
     8941 ttgtccgccg cggcggacgc gaaactaaaa cctaaaatcc aaggtgattg tacgcctgga
     9001 ctgctgattg tctctttagt ttagttgtgg cttcgagcga acccgtcgaa tgatcgctcc
     9061 gattatttcc gcaagttcag cttttcgatc acattcttgt aacgatcagc ttccgttttg
     9121 ctcaaataat cgagcaggct ccgtcgttgc gcgaccatct tgagtaagcc gcggcgcgac
     9181 gaatgatctt tctggttaat cttaaggtgc tcagtcaaat gctcgattcg gtgcgtgaga
     9241 agtgcgactt gcacatccgc gctgccggta tctttgtcat gcaattggaa ctccttgaga
     9301 tccgacgttt ggttgctctc ggccataacg aagcgcctat tgtagccgaa gaacccatct
     9361 tcgcaaccgc acaaaccggc cgcgcctgca accagtcgcg tgttcttaag ctggatgcct
     9421 ttcccgtttg ccgtcgtacc aaagactgag ctttgcacgc gaacggactc cacggggacc
     9481 gcggacgatt gcgccaaaga actcgcgaag aaactgtttg gctggataca tgcgcaattt
     9541 ccgacctgaa gtaacaaccg gttcgcgcag cactttgaag cggcctagct tttttagctc
     9601 gagggaaaaa taaacttctt caccagcaaa gtactgttcg tcgaatccgc caatgacatc
     9661 gaaattgcga cgggtagtga aaagaaatgc gccggcccca aggttcaggc cgaaataaac
     9721 cgacgaaaac ccgcgtaaca acattcgtcc ccaaaaggga acaaatccgt ccatcgccac
     9781 tcgggcgctg cctccggtat aaccaccttc cagagcagct atcccctcac tgacatgccc
     9841 tcgattgatc cgcgtgtc
//
LOCUS       DATDAJ010000042         2241 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_220807, whole genome shotgun sequence.
ACCESSION   DATDAJ010000042 DATDAJ010000000
VERSION     DATDAJ010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220807"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VIS53_00965"
     CDS             <1..410
                     /locus_tag="VIS53_00965"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HEY5766380.1"
                     /translation="LLHVGHVRYLQAARALGDLLVVGLNGDRSVHELKGAGRPITTQS
                     ERAEILAALACVDLVTIFPEIRAAKFLAAVHPAVYVKGGDYTPRTLNEEELTILKEIE
                     AAIRLIPLETGYSTSGLIERICKGRSKKTKRLR"
     gene            407..1027
                     /gene="purN"
                     /locus_tag="VIS53_00970"
     CDS             407..1027
                     /gene="purN"
                     /locus_tag="VIS53_00970"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEY5766381.1"
                     /translation="MKHLPIGILGSGKGSNCRAILERIRSGDLAAETRLVISDVLDAP
                     ILDIAREFGVANAYLPPGRFRTRLEPAMEEQLVKMLRDAGIELVVLAGFMRVLHEPML
                     KAFPRRIINIHPSLLPKFPGLESWKQAIVAGETVTGCTVHYVDEQIDHGRVLAQKEVR
                     ILPNDTPESLHARIQVLEHELYPAVIGEFCKRYAEASQQAGGRPDK"
     gene            complement(1047..2048)
                     /locus_tag="VIS53_00975"
     CDS             complement(1047..2048)
                     /locus_tag="VIS53_00975"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: protein motif:HMM:NF000942.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEY5766382.1"
                     /translation="MKITNTAVIGAGGWGTALAGLWAKGGRKIVLWGHNADRIARMRK
                     TRENSDYLPGLQLPDSVHMTQELSDCADADLIVLATPSTALRNITAHLAKVIGPTHAV
                     LLSCTKGIEHGSGMRMTEILRETFPENKIAVLSGPNLATEVARDLPTATVIACDDGDC
                     AATLQTTLGSPRFRIYTSLDVVSVELGGALKNVFAIAAGISDGLGLGDNAKAALVTRS
                     LAELVRFGVALGGTANAFYGLSGAGDLILTCYSERSRNYTVGQRLGRGQPLPEITASM
                     KMIAEGIPTARSAWECARRLNIATPITDEVYSILYKQKKPAVALEELLKREPKPEQA"
     gene            complement(2045..>2241)
                     /locus_tag="VIS53_00980"
     CDS             complement(2045..>2241)
                     /locus_tag="VIS53_00980"
                     /inference="COORDINATES: protein motif:HMM:NF014690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0043772 - acyl-phosphate
                     glycerol-3-phosphate acyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HEY5766383.1"
                     /translation="YVSLASITAAVVLPIVILVVSSHGQNTGKPLVYASACVAAVVIW
                     RHRSNLSRLMRGTEPRFTRK"
BASE COUNT          505 a          610 c          616 g          510 t
ORIGIN      
        1 atctgctgca cgttgggcac gtgcggtatt tgcaggcggc acgagcgctc ggcgatcttc
       61 tggttgtagg attgaacggt gaccgttctg tccacgagtt aaaaggagca gggcgcccga
      121 tcacaaccca gagtgagcgc gcggagattc tcgccgcctt ggcatgcgtc gatctggtca
      181 cgatttttcc agaaatccgg gccgcgaagt ttctcgctgc ggtccaccct gccgtttatg
      241 tcaaaggcgg cgattacacc ccgcggacac tgaatgaaga agagcttaca atattgaagg
      301 aaattgaagc ggcgattcgc ctcatcccgt tggagacagg gtattcaact tccggattga
      361 tcgagcgaat ttgtaaggga aggagtaaga aaactaagcg actcagatga aacacctgcc
      421 aattggaatt ctcggctccg ggaagggaag taactgccgc gcgatcctcg agcgcatccg
      481 atcaggcgat ctcgctgcgg aaacgcgcct cgtgatttca gatgtgctgg atgcaccgat
      541 ccttgatatc gcgcgggagt ttggtgtggc gaatgcgtat ttgccgccgg gcaggtttcg
      601 tacgcgcttg gagccggcaa tggaagagca gctcgtgaaa atgttgcgcg atgccggtat
      661 cgaacttgtc gttctcgccg gtttcatgcg ggtcttgcat gaaccaatgc tgaaggcgtt
      721 cccgcgtcgc attattaaca ttcacccatc gcttctgcct aaattcccag gacttgaatc
      781 atggaaacaa gctattgtcg cgggcgaaac agtgaccggc tgcacagtgc attacgtcga
      841 cgaacaaatc gatcacggac gagtacttgc acagaaagag gtaagaattt tgcctaacga
      901 cacgccggag agcctgcatg ctcggattca agtccttgag cacgaactat acccggccgt
      961 tatcggcgaa ttctgcaaaa gatatgctga agcaagccag caagctggag gtcggccaga
     1021 taaataggtc gttgaagctt gcgtggctat gcctgttcag gctttggctc gcgctttaac
     1081 agctcttcca aggcaaccgc cggttttttc tgtttatata agatcgagta cacttcatcg
     1141 gtaataggcg tggcaatatt caagcgccgt gcgcattccc aggcgcttcg cgctgtcgga
     1201 atgccttccg cgatcatttt catggaggct gtaatttccg gcaacggttg acctcgcccg
     1261 agccgttgcc cgacggtata attccggctg cgctcgctgt agcaggtcaa tatcagatca
     1321 cccgcgccgc ttaggccata aaaagcattc gccgtcccac ccaaggctac tccgaaccga
     1381 accagctcag ccaatgatcg ggtgaccagt gctgctttgg cgttgtcgcc aagtcccaga
     1441 ccgtcactga ttcccgcggc gatggcgaac acgtttttca atgcaccgcc cagctcaacc
     1501 gagaccacat cgaggctggt gtaaatgcga aagcgtgggc ttcccaacgt ggtctgcagc
     1561 gtcgccgcgc aatcgccgtc gtcacacgca atcacagtcg cggtcggaag atctctggcg
     1621 acttcggtcg caagatttgg accggacaac acggcgattt tattctccgg gaaagtttcg
     1681 cgcaggattt cggtcatcct catcccgctg ccatgttcaa tcccttttgt gcagctcagc
     1741 aataccgcat gagtggggcc aattactttc gccaagtgcg ctgtgatgtt gcgcaatgcg
     1801 gtagacggcg tcgcaagcac gatcaggtca gcatcggcgc aatcactcag ttcctgggtc
     1861 atgtgcactg aatcaggaag ctgtagcccg ggaagataat cgctgttttc gcgggtcttt
     1921 cgcattcgtg cgattcgatc cgcgttgtgg ccccagagga caatttttcg accacctttt
     1981 gcccacagac cagctaacgc cgttccccaa ccgccggcac ctataactgc cgtgttcgta
     2041 attttcattt tctagtaaag cgcggttcgg tgccgcgcat cagccgcgaa agatttgagc
     2101 gatgacgcca aatgacaact gccgcgacgc aggcggaagc ataaactaac ggttttccgg
     2161 tgttttgacc atgtgagctg actacaagaa tcacgattgg taggacgacc gcagctgtga
     2221 tggaagctaa cgaaacgtac c
//
LOCUS       DATDAJ010000043         2905 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_222051, whole genome shotgun sequence.
ACCESSION   DATDAJ010000043 DATDAJ010000000
VERSION     DATDAJ010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222051"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1080
                     /locus_tag="VIS53_00985"
     CDS             <1..1080
                     /locus_tag="VIS53_00985"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY5766384.1"
                     /translation="EIADKIDAFMRANGGFVRKTDFEKHTSTWVEPVSVSYRGYDVFE
                     LPPNGQGIATLQILNILEGFDLRAMGRNSLETLHVMIEAKKIAWADRAKFYADPDFAK
                     IPLAGLLSKQYAAERRKLIDPNHTAKQVEAGNPQNGADAPPRRSVQISARGRAGSSSL
                     IDDGDTIYMCTADDEGNMVSLIQSNYRGMGSGIVVPGLGFMFQDRGELFSMDPQHANV
                     YAPGKRPFHTIIPGFVMKDSKPWEAFGVMGGGMQPQGHVQVLTNQIDFGLNVQEAGDA
                     SRWQHEGDNEPTGEKMNASGGYVEVESGIPYETVRELRKKGHDVRFDVGGYGGYQAIK
                     VEMHDGRRVYVGASESRKDGMAAGY"
     gene            complement(1158..1748)
                     /locus_tag="VIS53_00990"
     CDS             complement(1158..1748)
                     /locus_tag="VIS53_00990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766385.1"
                     /translation="MIRAIALPVMFLTSAIIALAADQPNSDEPGEFDVEPPILKQNLS
                     DELAEAATPDGDVARCEKKLERSKRNAAGAERLWRIGVLAKVEVEQRALKVVKCEAEV
                     ASARVVQAKGAVAEQESRVASGEATKQELEVAKTALAQLIEAEGKALAKRESAELEFA
                     EANLRRQQRLLRLGSAHKSDVTNAEEKLAELKGPKN"
     gene            2177..2536
                     /locus_tag="VIS53_00995"
     CDS             2177..2536
                     /locus_tag="VIS53_00995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEY5766386.1"
                     /translation="MKRAIWAANQLRSKPYRYGGGHKSFKDHGYDCSGTISYVLAAAG
                     LISTPMSSTEFRSYGERGPGKWITIYAREGHTFAVIAGLRLDTTPFDHYTGKWAPRWY
                     AAYRPPKGFDARHPIGL"
BASE COUNT          621 a          817 c          799 g          668 t
ORIGIN      
        1 gagatcgctg acaagatcga cgcgtttatg cgtgccaatg gcgggttcgt gcgaaaaacc
       61 gatttcgaga agcatacctc aacgtgggtc gagcccgtct cggtgagcta tcgcgggtat
      121 gacgtgtttg aactgccgcc gaacggtcag ggcatcgcaa cgctgcagat cttgaacatt
      181 ctcgaaggat tcgatctgcg cgccatgggt cgcaattcac tcgagacgct gcacgtcatg
      241 atcgaagcaa agaagatcgc gtgggccgat cgagcgaagt tttatgcaga tccggatttt
      301 gcgaagattc ctctggccgg gcttctctcg aagcaatacg ccgcagagcg tcgcaaattg
      361 attgatccga accacacggc caaacaggtc gaagccggca atccgcaaaa tggagccgac
      421 gcgcccccgc gtcgctctgt tcagatatcg gcccgagggc gggccggctc cagttcgctt
      481 atcgatgatg gcgacacgat ttacatgtgc accgcggacg atgaaggcaa catggtgtcg
      541 ctgatacaaa gcaattatcg cggaatgggc agcggtatcg tcgtgcccgg cttgggattc
      601 atgtttcagg atcgtggcga gcttttctcg atggacccgc aacatgcgaa tgtttacgca
      661 cccggtaagc gcccttttca caccattatt ccaggattcg tgatgaaaga cagcaaaccg
      721 tgggaagctt tcggtgtcat gggcggcggc atgcagccgc agggtcacgt acaggtgctc
      781 acaaaccaga ttgattttgg tttgaatgtg caggaagccg gggacgcatc ccgctggcag
      841 catgaaggcg acaacgaacc taccggcgaa aaaatgaacg cttcaggtgg atacgttgaa
      901 gtcgaaagcg gtattccgta cgagacggtc cgcgaactgc gaaagaaagg tcacgacgtg
      961 cgtttcgacg taggcggtta cggtggttac caagcaatca aagtcgaaat gcatgatggc
     1021 aggcgcgttt acgtcggcgc cagcgaatca cgcaaagacg gaatggcagc aggatactag
     1081 gtcgcttgtt gggcgtctgt gtcagacgcc aaacaattgg atcggcgttt gacacaaacg
     1141 ccctacaatt ttttgagcta attctttggc cccttcagct cggcgagttt ttcttccgcg
     1201 ttagtgacgt cggatttgtg cgcgctgccg agcctaagca atctttgctg acgccgcaga
     1261 tttgcttcag caaattcaag ctcggcgctc tcgcgttttg ctaatgcttt tccctcggct
     1321 tcgatcaatt gcgcgagcgc tgttttcgcc acttccagct cttgttttgt ggcttcacca
     1381 gacgcaacgc gagattcctg ctcggcgact gctcctttgg cttggacgac tcgcgcgctc
     1441 gccacttcag cctcgcattt caccaccttc aatgctcgct gctccacttc gaccttcgcg
     1501 agcacaccga tcctccacag gcgttccgcg ccggcggcat ttcgtttaga acgctccagt
     1561 ttcttttcgc accgggcgac atcaccgtcg ggcgtcgcag cctcggcgag ttcatcggaa
     1621 agattttgct ttaatatcgg cggctcaaca tcgaactcac caggctcgtc agaattcggt
     1681 tgatccgcag ctaatgcgat tatcgcgctg gtgagaaaca tcaccggcaa cgcgatcgcg
     1741 cggatcatgc tggcagttta tcacaaaatt tccttggtgg aacgcgttgt cctccgtaaa
     1801 ggagcggctc ccacggagct ttacgctcaa cgcgttggaa acgcggcttc gccgcctgat
     1861 attgcgtctt tggcgactgg tctgccatcg tcttgaggag ccgccttcgt ttcgaactac
     1921 ggcgggccag gcaagacgat ccaccaaagc ttgtaaaatt ttcctttcat ccgccacttt
     1981 ctttcgttaa aagacggacc cggaggaatt tatctatccg gtcaagcgtc aaatcctgct
     2041 aaccgttgtc atctcaggat tgatccttcc atcggcatcg gccgatcttt ttccgagttc
     2101 cggacctgtt gcatcgggta aaggtgcgcg tcttcgattc gggaatgccg ccgcaccgaa
     2161 gaaggcaccc ctttcggtga aacgcgcgat atgggcggcg aatcaacttc ggtcaaaacc
     2221 ttatcgctac ggtggcggcc acaaatcatt taaagaccac ggttacgatt gttccggcac
     2281 aatctcctat gtcctggctg cggctggttt gatcagcacc ccgatgagtt caaccgagtt
     2341 tcgcagctac ggcgagcgcg gtcctggcaa atggatcacc atatacgcgc gcgaaggtca
     2401 cacgttcgca gtcatagcgg ggctgcgact cgataccacg ccatttgatc actacaccgg
     2461 caaatgggcg ccgcgttggt acgcggctta ccgcccaccg aagggcttcg atgccagaca
     2521 tccgatcggg ttgtgatttc gcccctctgg ctttcgctgc cctcatcgag gcttcctttc
     2581 cggcctaata ttgccgacac ccgctgtagc tgcttccctg tgggaagcgc aacgtggatg
     2641 tcgacacgga cgagtgaaag cgtcgcccac agggcgagcg ctacagggtg cgttatgcgc
     2701 tgaggacagc gcacactaca gccaatcaat cttgacttga tggctgggaa gccgtcactg
     2761 cttgagcatc aatatgcaaa ggagtcgttc aatcgttcga gttttagcat cgttgctaat
     2821 cctggcggcg ccgttttgcg ctgccgcgcc gcaacaaagt cacgtcacct ctgagcaggt
     2881 aactcacgcg gttcaagaag ttgaa
//
LOCUS       DATDAJ010000044         4824 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_230602, whole genome shotgun sequence.
ACCESSION   DATDAJ010000044 DATDAJ010000000
VERSION     DATDAJ010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4824
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230602"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="VIS53_01000"
     CDS             <1..229
                     /locus_tag="VIS53_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEY5766387.1"
                     /translation="LKGKSREEVMEMLQAFHHLVTADTSEAPKTLGDLRVMQGVRKFP
                     QRVKCAMLAWRAVQQAFEQGSGEATVSTEPA"
     gene            complement(382..1572)
                     /locus_tag="VIS53_01005"
     CDS             complement(382..1572)
                     /locus_tag="VIS53_01005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766388.1"
                     /translation="MDPNLRADFNADFTSEKYDALARCVNETEKWPADFRISETPIFL
                     TREFTDEVTRAANEIVAATRTPEFVKHSAMAVPKDFEVPNESAHPSFHVVDFAICAEG
                     DRLTPRLIELQAFPSLFGFQLVLLDCIRKAYSVIPRNWTSSFGGIKDAAYFEFLRRTI
                     IADSPPESVVLLEIQPEKQKTRVDFAATETFLGIRPVCVTKIKKRGRQLFYDHQGHDV
                     RIERIYNRVIFDELSQRHDLNLQFRFQDDLDVTWVGHPNWYFRISKHSLPFLKTEHTS
                     PTFFVDEFPSDEDVGDYVLKPLYSFAGHGVDMEPTPEKIAALQNPHEWILQRKIEYAS
                     FVPTIDGHKSKAEIRMMFVWPDQDRDPTLVNNLVRMSQGKMMGVDFNIDKTWVGASIA
                     LHGG"
     gene            complement(1815..2834)
                     /locus_tag="VIS53_01010"
     CDS             complement(1815..2834)
                     /locus_tag="VIS53_01010"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014164.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEY5766389.1"
                     /translation="MPDRAYLHPIDPELLPGARNAIDTCLRLKSQERITIITDTAARG
                     IAAALQSEVERVGSEYSLFVLEHHARRPLSYMPEIILDDLALSQVSIFAAQSQPGELV
                     ARTEMTNVVNHHHIRHAHMVNINRQIMLEGMRADFCAIDKLSQRLVELARQVDRITCK
                     TPHGTEFVAELSPKLKWLKTSGIIARDKWGNLPGGEIFTAPMNTNGVFVVDGVVGDYL
                     CERFGDLQSNPLTIEVENNRIRALHSENKDLRDEFRAYTNTDENSDRVGEFAIGTNTA
                     CTHVIGHILQDEKIPGVHIAFGHPYAEHTGANWASKTHIDCVGRDFDIWFNGQQVMRE
                     GKFLI"
     gene            3156..4691
                     /locus_tag="VIS53_01015"
     CDS             3156..4691
                     /locus_tag="VIS53_01015"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEY5766390.1"
                     /translation="MVATPSGMNQYAFTQREIARQLHPNLPATPFWAYDDGSGLGGQA
                     GSFGMAVVAQSGTPLDVSYTSALPFTYPDWIPVDTRLTPLGDQVRMMTHLHGGFVDAN
                     SDGNPAITPNGFGPGDTQMVHYSNQLPQMPASLLWFHDHGLGATRLNVFAGLAAAYIL
                     RDQYDTGLEPNPIGIPGGAYEIPLVIQDRQFSRDGKFFYPTSDIEGVTWVGEYFGDVM
                     LVNGKVWPYLNVEPRMYRFRILNGCNARILNLDLGGSDFWQVGAEGGMWDIPVRTRRL
                     VLAPAERADVLVDFSRLAGHTLVLMNHRPPRPVSNPAPQLPQVMQIRVGTTVSRPGPT
                     SIPSSLPGRAANLGSPVNTRYITLNEIDPEEVEWFLNLNAVRFDEPATETPTVGTIED
                     WVYINMTGDTHPMHSHLVTFQVVGRTPFDVEAYEEAYGGPNGVPGGIDPTPFATGPMQ
                     PPEPTERGFKDTVKANPGELTTIRAQYDLPVGVTAPQTYVYHCHIVEHEDNDMMRPFT
                     VVP"
BASE COUNT         1070 a         1310 c         1371 g         1073 t
ORIGIN      
        1 attgaaaggc aaaagccggg aggaagtaat ggaaatgctc caagcatttc atcatctcgt
       61 gacagccgac acgagcgaag ctccgaagac attgggtgat ctgcgcgtga tgcaaggcgt
      121 tcgaaaattc ccgcagcggg tgaagtgcgc catgctggca tggcgcgcgg tgcagcaggc
      181 gttcgagcaa ggctccggtg aagcaacggt gtcaacggaa cccgcgtaat cggcgattgg
      241 gtactgcgcg cgtgccgcgt gctgctttcg gcgtcgcgcc ggcacgaact ttttcgccga
      301 actccgctac gccaacacga atgaactgac aggaaagttc gcgatcgcgg gacgcgctcg
      361 ccagcacgcg agacgcgtgc gctaccctcc gtgcagtgcg atgctggcgc ccacccaggt
      421 cttgtcgatg ttgaaatcga cccccatcat tttgccctgg ctcattcgga ctagattgtt
      481 cacgagcgta ggatcgcgat cctgatccgg ccatacaaac atcatccgga tctcggcctt
      541 cgatttgtga ccgtcgatcg tcggcacaaa cgaggcgtac tcgattttcc tctgcagaat
      601 ccattcatgc ggattctgta aagctgcgat cttttccggc gtcggctcca tgtccacgcc
      661 gtggccggcg aatgaataaa gcggtttcaa cacgtaatct ccgacgtctt cgtcggatgg
      721 aaattcatca acgaaaaacg ttggcgacgt gtgttcggtt ttgagaaacg gcagggaatg
      781 tttgctgatc cggaaatacc agttcgggtg accgacccac gtcacatcga gatcatcctg
      841 aaaacgaaac tgtaaattca gatcgtgccg ttgactcagt tcgtcgaaga tgacgcgatt
      901 ataaattcgt tcgatccgca cgtcgtgccc ttgatgatcg taaaataatt gccggccgcg
      961 ctttttgatt ttggtcacgc aaaccggtcg aatgccgaga aacgtttcgg tagcggcaaa
     1021 gtccacgcgg gttttttgtt tttccggctg gatctcgagc aataccacac tctctggcgg
     1081 tgaatctgca atgatggtgc gccgcagaaa ttcgaaatac gcggcatctt taattccacc
     1141 aaatgaggag gtccaattgc gcggaatgac tgaatacgct ttgcggatgc aatccaagag
     1201 caccaactga aaaccgaaca agctggggaa tgcctgcaat tcgattaagc gaggtgtcaa
     1261 ccgatctccc tccgcgcaaa ttgcgaaatc gaccacgtgg aaacttgggt gagctgattc
     1321 gttaggcact tcgaagtcct tcggaaccgc catcgccgag tgtttgacaa attccggcgt
     1381 tcgcgtcgcc gctacaatct cgttcgccgc gcgcgttact tcgtcggtga actcgcgggt
     1441 taagaaaatc ggtgtctcgg aaatacggaa atctgccggc catttctccg tttcattcac
     1501 gcaccgcgcc agagcgtcgt atttttccga cgtaaagtcg gcgttgaaat cggcgcgaag
     1561 attcggatcc acctgatgat ccgccagtcg ctatccgccg tttggctggt cgattacgct
     1621 gttgatgtga agaggggtga gaacagcggg ggcaccattg tcagcgacta cgataacacg
     1681 gttgccgcgt ggggtaataa aggcgtgatc agctgtcgga acggaatatt ctcggccgtc
     1741 cgaagtgcga atgacaaacg gtacgaaagg agctgctacg aggcgttcac ggacatcaac
     1801 aatcatacgg cgaattatat caaaaacttc ccttcccgca ttacctgctg gccattgaac
     1861 cagatgtcga aatcgcggcc gacgcagtcg atgtgcgttt tggaggccca gtttgcgccg
     1921 gtatgttcgg cgtagggatg accaaacgcg atgtggactc cgggaatttt ttcgtcctgt
     1981 aaaatgtgtc cgatgacgtg cgtgcaggcg gtgtttgtac caatcgcaaa ttcgccgacg
     2041 cggtcgctgt tttcgtcagt gttcgtgtaa gcccgaaatt cgtcgcgtaa atccttgttt
     2101 tccgaatgca gcgctcgaat acgattattt tcgacctcaa tcgtaagtgg attcgattgc
     2161 agatcaccaa accgttcgca cagataatcg ccgaccacgc cgtccaccac aaacacgccg
     2221 ttggtgttca tgggcgcggt gaaaatttcg ccgccgggca aattgcccca tttgtcacgt
     2281 gcaatgatgc cgctggtttt gagccacttt agttttggcg aaagctccgc tacgaattcg
     2341 gtaccgtggg gcgttttgca ggtgatgcga tcgacttgac gcgccagttc gaccaaacgc
     2401 tggcttagct tgtcgattgc gcaaaagtcg gcgcgcatgc cttcgagcat aatctggcga
     2461 ttgatattca ccatgtgagc gtgacggatg tggtgatgat ttaccacgtt ggtcatctcg
     2521 gtacgtgcga cgagttcacc gggttggctc tgcgcggcga aaatcgacac ctgcgacagc
     2581 gcgaggtcgt cgagaatgat ctcaggcatg tatgagagcg gccgtcgcgc gtgatgctcc
     2641 agcacaaaaa gactgtattc cgatccaacc cgctccactt ccgattgcag cgccgctgcg
     2701 atgccgcggg cggccgtgtc cgtgataatc gtaattcgct cctgcgattt gagtcgcaga
     2761 catgtgtcga tcgcattgcg tgcaccggga agcaattccg ggtcaattgg atggagataa
     2821 gcgcgatcgg gcataactga aagctgagag gattactcgg aaactaatcg caggcaaaca
     2881 ctgctctgca cgcgaactct gctgagagaa tgcgaaactc ggagaagaag cgcagcaaaa
     2941 ggcgaccagt atttcacaag ttacgcggag ccagcgcaat gtcgtccgtc acaatagttg
     3001 ccatgataac gagacgatct tttcttaaat gtggggcagc agccagcgct actctgtccc
     3061 taccgtggac actgcggcaa gcgtttgcga ccagaccagc gcggagcctc ttaaccaagt
     3121 atatccagcc gctgccgttg ccgggcgcgg gaattgtggt cgccacgcca agtggaatga
     3181 atcagtacgc gttcacgcaa agagagattg cacggcaact gcatcccaac ctcccggcga
     3241 cgccgttctg ggcgtatgac gatggttccg gactcggtgg ccaggctggg tcgtttggca
     3301 tggcggttgt cgcgcagagc ggtacgccgc ttgatgtgag ttacaccagt gctctgccat
     3361 tcacataccc agattggatt ccggtcgata cgcggctcac gccgctcggc gatcaagtgc
     3421 gcatgatgac gcatttgcac ggcggtttcg ttgacgctaa cagcgacggc aaccccgcca
     3481 tcacgccaaa cggtttcggc cctggcgaca cacagatggt ccactacagc aatcaattgc
     3541 cgcagatgcc ggcgtcgctt ctctggttcc atgatcatgg cctcggtgcg acgcgtctca
     3601 acgtttttgc aggactggcc gctgcctaca ttcttcgcga ccagtacgac accggcttag
     3661 aaccaaatcc gatcggcatt ccgggcggcg cgtacgaaat tccgctggtt atccaggatc
     3721 gtcaattcag cagagacgga aaattctttt atccaacgag cgacatcgaa ggagtgactt
     3781 gggtcggcga gtatttcggc gacgtgatgc tggtcaacgg caaggtctgg ccatatctga
     3841 atgtcgaacc gcgcatgtac cgtttccgta tcttgaacgg ctgcaacgcg cgcatcctga
     3901 atctcgatct cggcggctca gacttctggc aggtcggagc agaaggtggc atgtgggata
     3961 ttccagtgcg gaccaggcgt ttggtgctgg ctccggccga gcgagccgat gtgcttgttg
     4021 atttcagcag attggcgggc cacacgctgg tgttgatgaa tcacaggccg ccgaggccag
     4081 tctcgaatcc agctccacaa ttgccccagg tgatgcaaat tcgcgtcggg acgacggttt
     4141 ctcgtccggg accgacttct attccatcga gtctccccgg gcgcgcggct aacctgggca
     4201 gcccggtcaa tacacgttac atcacgctga acgagatcga ccctgaggag gtggaatggt
     4261 tcttgaatct gaacgcagtg cgcttcgatg aaccggcaac agagacgcca acggtcggaa
     4321 caattgagga ctgggtttac atcaacatga ccggagacac gcacccaatg cacagccacc
     4381 ttgttacgtt ccaggtggtc gggcgtacac cgttcgatgt ggaagcctat gaggaggctt
     4441 atggtggtcc caacggcgtg ccgggtggaa tcgatccaac tccgttcgcc acgggaccga
     4501 tgcagccgcc cgaaccgacc gagcgcgggt tcaaggatac ggtgaaagcg aatcctggcg
     4561 agttaaccac aatccgggca cagtatgatc tcccggttgg cgttactgcg ccgcagacat
     4621 acgtctatca ctgccacatc gtcgaacacg aggacaacga tatgatgcgg ccatttacgg
     4681 ttgttccttg acgagtcggt gcagtgttac tttcgtgtct aagtgcacga aagttgaccg
     4741 atggatctga cgacgaaata tcttggcctc tcgctgcggt cgcctctggt gccgtctgcc
     4801 tcgccgcttt cggagaagat cgac
//
LOCUS       DATDAJ010000045         3450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_242166, whole genome shotgun sequence.
ACCESSION   DATDAJ010000045 DATDAJ010000000
VERSION     DATDAJ010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242166"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..480
                     /locus_tag="VIS53_01020"
     CDS             <1..480
                     /locus_tag="VIS53_01020"
                     /inference="COORDINATES: protein motif:HMM:NF025033.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5766391.1"
                     /translation="LVDHARRIGAQIEVDAVDRQAATLEIARRLSADYPEISYHEANV
                     LEWDSPHGYDIALCSLVLHHFSDDDAVKLLRRCRELSKRFVLVSDLRRGFLLRAGVYV
                     LTALIFREPMTRFDARLSAQRAFSFAEMCELAIQAGWKNFGRKKFRFARQAVWLETY"
     gene            complement(627..2975)
                     /locus_tag="VIS53_01025"
     CDS             complement(627..2975)
                     /locus_tag="VIS53_01025"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY5766392.1"
                     /translation="MQTTRANLYEFGDFRLDTVKRRLRRLDGTPVPLTSRVLDTLLYM
                     VEHHDAVLDKERIMEAVWPDSIVEENNLAQAISKLRQVFGETPGSHNYIVTVPGRGYR
                     FVAEVKEKIATSPKPGDAATADAVSIATLEKAATEELVQKSIAAVPEQTRPADFRTFE
                     GPPIEQPRRLSGLPGKTAWLWAAGISVAAFVGFGALFLARYHSPPASVQAPSFFSSTG
                     GISSEPAPIPEKSVAVLPFDNLSDDKQNAYFAAGVQDEIISDLARIAELKVISRTSAN
                     LYKSGNPRNSREIGQQLGVAHLLEGSIQRIGNRVRVNAQLIDTRTDAHSWAQIYDRDV
                     SDFFAIQSEIAKAIAGQLHAKISLAEKLSIERAPTGDLNAFDLYTRAKTLSLPGFFSN
                     AGKKDLLEATDLLNQAVSRDPAFFRAYCQLARSHDILYFLGYDRTPARLALAEAAIQA
                     AFRLRPDAGEAHLARAENLYRGYLDYDDALKELEIAHQTLPNDPRIFELMGLIQRRQG
                     RWEESTRNLEHAVDLDPRNLFTLSAIADSYRDLRRYADAKSAYDRALAVDPDAIKTKA
                     ARAQVEMDWKGDTKPLHQLIDSIRAANSFALPQVADTWMLCALAERDPAAAKDALIAS
                     GENTPLNNDVFRFNRPFVEGVIARMTNDYDKAQSAFTTARTEQEKIVQAQPDYGPPLV
                     VLGLIDAALGRKEEALREGRRAVELLPVEKDSIKGSLVIAYLAMIAAWVGDKDLACER
                     LATAIRYPGPLSYGELKLLPFWDPLRGDPRFEQIVNSLAPKS"
     gene            3140..>3450
                     /locus_tag="VIS53_01030"
     CDS             3140..>3450
                     /locus_tag="VIS53_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766393.1"
                     /translation="MKKHLKENAITTIKAVMKKPIGWPRQHSGFSFILIAVAMACSPV
                     AQARQPSEDRGNGNSAAENVDALNLTTTGSDNTAHGWFSLFSNTTGSSNTADGFKALH
                     D"
BASE COUNT          762 a          949 c          968 g          771 t
ORIGIN      
        1 ctcgtggatc acgcgcgaag gattggcgcg caaatcgaag tcgacgcagt cgatcggcaa
       61 gctgcaacgc ttgaaattgc ccggagattg agcgccgatt acccggaaat ttcctaccac
      121 gaagcaaacg ttctggaatg ggattccccc cacggctacg acatcgcgct ttgttcgtta
      181 gttcttcatc atttcagcga tgatgacgcc gtaaaacttt tgcggcgatg tcgcgaatta
      241 tcgaagagat ttgtgctcgt gtcggatttg cggcgcggat ttctactccg ggcgggcgtg
      301 tacgttttga cggccctcat ttttcgtgaa ccgatgacgc gctttgacgc gcgtctttcc
      361 gcccagcgcg cattttcatt tgccgaaatg tgcgagcttg cgatccaggc ggggtggaaa
      421 aatttcggtc gcaaaaagtt tcggttcgcg aggcaggcgg tttggctgga aacctattaa
      481 cgtctcgcgt taccaaaact gctactttgg tgcgagcgag gtgacccgcc ttcgccaacc
      541 agccttcgcg taagcttcca tcttcggtct gactacgacg tgacgagccg gcgagtctgg
      601 aggctacggc gtggttggca gacacgtcac gattttgggg caagcgagtt tacgatttgt
      661 tcgaagcgcg gatcgccccg caggggatcc caaaacggca agagtttcaa ttcgccatag
      721 ctgagcgggc cagggtagcg aatagcggtg gcgaggcgtt cgcaagcgag atctttgtct
      781 cccacccacg cggcgatcat tgccaggtac gcaatcacga gcgacccctt gattgaatct
      841 ttttccacgg gcaaaagctc gacagcacgc cggccttcgc gcaacgcttc ttctttgcgc
      901 ccaagagcgg cgtcgatcaa accgagcacc accaatggtg ggccgtagtc tggttgggcc
      961 tggacgattt tctcttgttc ggtgcgcgcg gttgtgaaag ccgactgcgc tttgtcgtaa
     1021 tcgttggtca tgcgcgcgat gacgccttcc acaaagggtc gattaaaccg gaaaacgtcg
     1081 ttgtttaagg gggtgttttc tcctgaggcg atcagggcgt cttttgcagc ggcagggtcg
     1141 cgctcggcca atgcgcaaag catccaggta tcggcgacct gcggcagcgc gaaggaattc
     1201 gcagcccgaa ttgaatcgat caattgatgc aacggcttgg tatcgccttt ccaatccatt
     1261 tccacttggg cacgcgctgc tttcgtcttg atggcatcgg gatcgacggc tagtgcgcga
     1321 tcgtacgccg attttgcgtc agcgtagcgc cgaagatccc ggtaactgtc ggcgatcgcc
     1381 gacagcgtga agaggttgcg cgggtcgagg tcaactgcat gttccaggtt gcgtgtggac
     1441 tcttcccacc gcccctgccg tctttgaatc aaacccatta gctcgaatat cctcggatcg
     1501 ttaggcaaag tttgatgagc aatttccagt tcctttaacg catcgtcata atcgaggtac
     1561 ccgcgataaa gattttccgc acgggcaagg tgcgcttcgc ccgcgtcggg acggaggcga
     1621 aacgctgcct gaatagccgc ctcagccaga gccagcctcg caggcgtccg atcgtagcca
     1681 aggaagtaaa gaatgtcgtg gctccgagcc agttgacaat atgcccggaa aaacgccgga
     1741 tctcgcgaga cagcctggtt caacagatcg gtggcttcga gcaaatcctt tttcccagca
     1801 ttgctaaaga acccaggcag agaaagagtt ttggcgcgcg tgtagagatc gaaggcattg
     1861 aggtcgccgg ttggtgctcg ctcaatggat aatttttccg cgagggagat tttggcgtgg
     1921 agctggccag caatcgcctt tgcgatttcg ctttgaattg caaagaagtc ggacacatcc
     1981 cgatcgtaga tttgcgccca ggaatgcgcg tcagttcggg tatcgatcaa ctgcgcgtta
     2041 acccggaccc ggttgccgat tcgctggatg ctcccttcca aaagatgggc aacgccaagt
     2101 tgttgcccta tctcacgcga attgcgcggg tttccgctct tataaaggtt cgccgacgtg
     2161 cggctgatca ccttgagctc agcgattctc gcaaggtctg agatgatttc atcctgtacg
     2221 cccgcggcga aataggcgtt ttgtttgtcg tcgctgagat tatcaaacgg caacacggca
     2281 acactctttt cagggatcgg cgccggttca gatgaaattc cgccagttga ggaaaagaag
     2341 ctgggcgcct gtacactggc aggcgggctg tgatagcgag ccaggaacaa ggctccgaag
     2401 ccaacgaaag ccgccactga gatccccgca gcccagagcc aggcagtttt accaggcagc
     2461 cccgaaagcc ttcggggttg ctcgatcggc ggtccttcaa aagtccggaa gtcggccggc
     2521 cttgtctgct cgggaaccgc tgcgattgat ttttgaacca gctcttcggt tgccgccttc
     2581 tcgagggtcg caatggaaac tgcatctgcc gttgccgcgt cgccaggttt aggggacgtg
     2641 gctattttct ccttaacctc ggccacaaag cgatagccgc ggcccgggac cgtcacgatg
     2701 taattgtgtg accctggggt ttcgccgaag acctgtcgca gtttcgagat cgcctgcgcg
     2761 agattgtttt cctcgacaat tgaatccggc cagaccgcct ccatgattcg ctccttatcc
     2821 aagaccgcgt cgtggtgctc gaccatgtat aggagcgtat ccaataccct ggatgtgagc
     2881 ggaaccggag ttccgtcgag tcgtcgcaac cgccgtttga ccgtgtcgag tcggaagtcg
     2941 ccgaattcgt agaggttagc ccgggtagtc tgcatcgctg ttttcagaac aattcagaaa
     3001 aattcagctc ccgactaaag actttcataa gggcgcccgg cattttccac catgcgcaag
     3061 ttcggttcag acctacctgc gcaaaaacca caaaaccgac aaaaacagta aatcaaaaaa
     3121 tccaagtaag aacaagaaaa tgaagaagca ccttaaagaa aacgcaatca caaccataaa
     3181 agcagtcatg aagaaaccaa tcggctggcc ccgacagcat tcggggttca gtttcatcct
     3241 catcgcggtc gcgatggcct gttcgccagt cgctcaggcg agacaacctt ctgaagaccg
     3301 cggcaatggc aacagcgcgg ccgagaacgt tgacgcgctc aatctaacca caaccggatc
     3361 ggacaacacg gcacatggtt ggttttcgct ctttagcaac accactggtt catccaacac
     3421 ggctgacggc ttcaaagcgc tgcatgataa
//
LOCUS       DATDAJ010000046         4861 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_242651, whole genome shotgun sequence.
ACCESSION   DATDAJ010000046 DATDAJ010000000
VERSION     DATDAJ010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4861
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242651"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VIS53_01035"
     CDS             <1..238
                     /locus_tag="VIS53_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766394.1"
                     /translation="AIVATQIAAMFMCSQGWLVPPLPWGIIGFVWAYNIAWMIVQDIV
                     KLGLYRILDPAHSWKQWLFEPLRVSTTGREKAAR"
     gene            256..1119
                     /locus_tag="VIS53_01040"
     CDS             256..1119
                     /locus_tag="VIS53_01040"
                     /inference="COORDINATES: protein motif:HMM:TIGR03709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HEY5766395.1"
                     /translation="MSNYQKKFVVKPASKIRLKQIDPDYHGKHESRKSALPEIEKNRQ
                     KMDELQYLMYAENEHSLLVVLQGLDAGGKDGTVRHVFTGMNPAGCVSIGFKQPTPKEL
                     AHDFLWRVHPHVPAKGSVVIFNRSHYEDVLVARVHDLVPEKIWSKRYDEINDFEKLIT
                     TQNNTTILKFFLHISKEEQLARFEKRLDDPARQWKISESDYKEREFWDDYTKAFEDVL
                     NKTSTEHSPWFIIPSNHKWFRDLAISQIIVRAMEDMDMQFPKPTVNLAEIRRKYHQAA
                     DQEKSDRSKKR"
     gene            1203..2507
                     /locus_tag="VIS53_01045"
     CDS             1203..2507
                     /locus_tag="VIS53_01045"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5766396.1"
                     /translation="MLSTGGTLLDGYAIFVLGVAMPIVIAGFHIQPDVVGLIGASLVF
                     GAVIGAGVGGPVADHLGRKKLMLADMIIIAAGACTSALANGPAMLFIGQLLVGIGVGI
                     DFPVGSSYISEILPKPGRARMMVDTIACQSVGMLLAAAVTLLLLRTGSTQAWRLFLAT
                     ETAVALLFFILRLSAPESPHWLMSRGKFAEAAQAFIRIIPEQRQAMLQLTGNHEELAA
                     PVPRVAGGLPILFSRRYRARTALVTIPWFLMDIATYGVGLFTPTILGAIEISGRTRGL
                     NAHDFALAEGSAIIDLFLLFGFLLGIWLVPRFGRIRMQAIGFAGMSAGMLVLVAAVGL
                     TSAGLHIPLVFAGFILFNLLMNAGPNSTTFTLAPILFPTQLRGTAGGFAAGTAKLGAT
                     LGVFFLPILKQKFGVPSVLGIVSAVSLLGLVVTLILGREDTE"
     gene            2568..3053
                     /locus_tag="VIS53_01050"
     CDS             2568..3053
                     /locus_tag="VIS53_01050"
                     /inference="COORDINATES: protein motif:HMM:NF015999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HEY5766397.1"
                     /translation="MEIPKQLIDCLDQNKVQYEILRHSEAVTAQRIAQAEHVKGRHQA
                     KVVMLKSGDQHLMVVLPADHHIDLDKIEKAIGKPVSLGKEDDFKSLFSDTAIGAMPPF
                     GNLYGLPTYVDKHLAEQDYIVFEAGTHTDAIKMSYSDYEKIVKPNVGDLAIKLHPMKG
                     A"
     gene            3091..4383
                     /locus_tag="VIS53_01055"
     CDS             3091..4383
                     /locus_tag="VIS53_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HEY5766398.1"
                     /translation="MKILLASVFLWLAFIATPAVFAAEKVGFINVDGAIGPATASYIS
                     RSIQEAKAENVQCLVIQLNTPGGLLDSTQKIVQSFLGSAVPVVVYVAPTGATATSAGC
                     FITLAANVAAMAPATTIGAAHPVSIGGFPSGGEEKPDETMKQKLENFSVSYMETIAGK
                     RQRNVEWAKSAVKESASITAQKALELKVIDLIATDMPDLLQKLNGRVVDGKPLNTAGA
                     QLSEIKMSPAERVFQKLWRPEVMFILMLIAIYGIIGELSSPGAILPGVVGAIALILAL
                     YLAAILPVNVAGLVLIALAMMLFIFDLYTPTHGVLTVGGVIAFLIGSLMLFDRADPLF
                     RLSLTFIIPATLVTAAFFIFVIGKGLRAQLLPVKVGKETLIGRTVTALTPIDSHNGRI
                     FVEGEYWNAVSDAPIEKGEEANIATVQGLTLKLTKKPH"
     gene            4566..>4861
                     /locus_tag="VIS53_01060"
     CDS             4566..>4861
                     /locus_tag="VIS53_01060"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEY5766399.1"
                     /translation="MQRFCGWMRPPPIAIWVASFCTLFTVVIVRGQAPPSAPGPPVIR
                     AMEVQYTGPATISKERILAQMRTKVGQVYSNEIVQEDIKALYKTGYVRNVRIFA"
BASE COUNT         1138 a         1246 c         1338 g         1139 t
ORIGIN      
        1 cgcgatcgtg gcgacgcaaa tcgccgcgat gttcatgtgc agccagggct ggctcgtgcc
       61 gccactgcct tggggaatta ttggctttgt gtgggcttac aacatcgctt ggatgattgt
      121 gcaggacatc gtgaaacttg gactttatcg cattctggat cctgctcatt catggaagca
      181 atggctcttc gaaccgctgc gagtgtcaac gacaggcagg gaaaaggctg cgaggtaaat
      241 caaaaagaaa agatcatgtc caactatcaa aaaaaatttg tggtgaagcc cgcatccaaa
      301 atccggttaa aacagatcga tcccgattac catgggaaac atgaatcacg caagtcagct
      361 ttgcccgaga ttgagaagaa ccgccagaaa atggacgaac tgcaatacct tatgtatgcc
      421 gagaacgagc attcgcttct cgttgtattg cagggactcg atgctggtgg caaagacggc
      481 acggtccgcc acgtctttac cggaatgaat ccagcgggct gcgtttcaat tggtttcaag
      541 caaccgacgc cgaaagaact ggcgcatgat tttctctggc gcgtgcatcc gcatgtgcct
      601 gccaaaggtt cagtggtgat tttcaatcgc tcccattatg aagatgtgct ggtggcgcgc
      661 gttcacgact tggtgccgga aaaaatctgg tcgaagcgct acgatgaaat caacgatttc
      721 gaaaagctga tcaccacgca aaacaacacg acgatcctca aattttttct gcacatttca
      781 aaagaggaac agcttgcccg gtttgagaaa cgactggatg acccggcgcg tcagtggaag
      841 atcagtgaat ccgactacaa ggaacgcgaa ttttgggatg attacaccaa ggcgttcgag
      901 gatgtcctta acaagacaag caccgaacat tctccgtggt tcatcattcc ttcaaaccat
      961 aaatggttta gggacctggc tatttcacaa atcattgtcc gggcgatgga agatatggac
     1021 atgcaatttc ccaagcccac cgtgaacctt gctgagattc ggcgtaaata tcatcaggcc
     1081 gccgatcagg agaaatcgga cagaagtaag aaacgttaac gttgcccgag atcgcgctac
     1141 cacaacgcct gacgctcctg ctggatgagt cgtctctgaa caggattcag cgatggcttt
     1201 gggtgctatc gaccggaggc acgttgctcg acggctacgc cattttcgtt ctcggcgtgg
     1261 cgatgcccat cgtcattgcc gggtttcata ttcaacccga cgtagtcggt ctcattgggg
     1321 cgagcctcgt gtttggtgct gtcattggag cgggagttgg cgggccagtg gcggaccatc
     1381 ttggccgaaa gaaattgatg cttgccgaca tgatcatcat tgccgctggg gcctgtacca
     1441 gtgcgctggc caatggaccg gcaatgctct tcataggaca actgctcgtc gggatcggag
     1501 taggtatcga tttccctgtt ggtagcagct atatctccga aattctgccc aagcccggtc
     1561 gtgcgcgaat gatggtggac acgattgcct gccaatctgt cggcatgctg ctcgcggcag
     1621 cggtcacact gctcttgcta aggacgggaa gcactcaggc ttggcggcta tttctggcga
     1681 cagaaaccgc agttgcccta ctctttttta tattacgctt gtcggcacca gaaagtccgc
     1741 actggttgat gtctcgcggt aaatttgcag aggcggcgca agcttttatt cggatcattc
     1801 ccgagcaacg acaggcaatg ttgcaactta ccggcaacca cgaggagctt gcagctccgg
     1861 ttcctcgcgt agccggtggg ctgccgatcc tgttttcgcg tcgttatcgg gcgcgcacgg
     1921 cgctggtaac tatcccctgg tttctgatgg atattgctac gtacggcgtt ggattgttta
     1981 cgccgacaat tctcggagcg atcgaaatct ccggtagaac ccgtggattg aacgcgcacg
     2041 attttgctct cgcagagggt agcgccatta tcgatttgtt tttgctattc ggcttcctgc
     2101 tcggaatctg gttagttcca cgattcggcc gcatccgaat gcaggcgatt ggtttcgcag
     2161 gcatgagtgc gggcatgttg gtattggtgg cggctgttgg cctaacaagc gcgggtttgc
     2221 acatcccgct ggtattcgcc ggattcatcc tgtttaactt gctgatgaac gctggtccta
     2281 actcgaccac gtttacgctc gccccgatat tattcccgac gcaattgcgc gggactgcag
     2341 gtggattcgc cgcaggcact gccaagctcg gtgcgacgtt gggcgttttc tttctgccaa
     2401 tcttaaaaca aaaattcggg gttccgagcg ttcttggaat tgtatcggct gtaagtctgc
     2461 tggggctggt cgttacccta atcctcggac gcgaggacac agaatagcaa ctgttccgag
     2521 tagtagagat agctcgggaa agtgatactt tttcaccgga ggtgcctatg gaaataccga
     2581 aacaactcat cgattgtttg gatcaaaaca aagtgcagta cgaaatcctg cgccattccg
     2641 aggcggtcac ggcgcaacgg atcgcgcaag cggaacacgt caagggccgg catcaggcga
     2701 aggtcgtgat gctgaaatct ggcgatcaac atttgatggt cgtgttgcca gcagatcacc
     2761 acatcgatct ggacaaaatc gagaaagcga tcggaaaacc tgtctcgctt ggcaaggaag
     2821 acgacttcaa atcactattt tcagacaccg cgatcggagc gatgccgccg tttgggaatc
     2881 tttatggtct gccgacttac gtcgacaagc atttagccga acaggattac atcgtgttcg
     2941 aagccggcac gcacactgac gcgataaaaa tgagctacag cgattacgag aagatcgtga
     3001 agccgaatgt aggagacctc gcgatcaagc ttcaccccat gaaaggagct tgagcttacg
     3061 aaggaccgtg cagcgactcg aaaaaatcga atgaagattc ttttggccag cgtctttctt
     3121 tggctggctt tcattgcgac accggcagtg ttcgcggcgg agaaagttgg ctttatcaat
     3181 gtcgacggcg cgatcgggcc tgcgacagcg agttacattt cgcgaagcat ccaggaagcc
     3241 aaggcggaaa atgttcagtg cctcgtgatt cagctcaaca cgccgggcgg tctgctcgac
     3301 tcaacgcaga aaattgtcca aagcttcctc ggatctgcag ttccggttgt ggtttacgtc
     3361 gcgcccaccg gcgcgaccgc aaccagcgca ggctgtttca tcacgctggc agccaatgtc
     3421 gcggcaatgg cgccggccac tacgatcggc gcagcgcatc cggtttccat cggcggtttt
     3481 ccgagtggtg gcgaagaaaa accggacgaa accatgaagc agaagctcga gaatttttcc
     3541 gtcagctaca tggagaccat tgcgggcaag cgccagcgca atgttgaatg ggctaagtcc
     3601 gccgtaaaag agagcgcttc gatcaccgcg cagaaagcct tggaattgaa ggtcattgat
     3661 ttgatcgcga ccgatatgcc cgatctgctg caaaaattga acgggcgcgt tgtggacggc
     3721 aaacctctca acaccgccgg cgcgcaactg agcgaaatta aaatgtcgcc ggccgagcgc
     3781 gtatttcaaa aactgtggcg accagaagtc atgttcatcc tgatgctgat cgcgatctac
     3841 ggaattatcg gtgaactgag ttcgcccgga gcaattcttc ccggcgtagt cggagcgatt
     3901 gcgttgattc tggcgcttta tctggcagcg atcctgccgg tcaacgtcgc tggactcgtc
     3961 ctgatcgcgc tcgcaatgat gcttttcata tttgatcttt acacgcccac gcacggcgtg
     4021 ctcacagtcg gcggagtgat tgccttttta atcggctcgc tcatgctttt tgatcgcgcc
     4081 gatccactct ttcgtttgtc gttgaccttc atcattcctg cgacactcgt caccgccgcg
     4141 ttcttcattt tcgtcattgg aaaaggactg cgcgcgcaac tgttgccagt gaaggtgggg
     4201 aaagaaacgc ttatcggaag gaccgtgacg gcgttgactc caattgattc gcataacgga
     4261 aggatcttcg tcgaaggcga atactggaac gcggtcagcg atgcgccgat agaaaaaggc
     4321 gaagaagcca atattgcaac cgtgcaggga ttaaccctca aattgacaaa aaaaccccat
     4381 tgagaagacg agcacacgcg ataaatctgc atggttctgt ttcgcggaca cgaaccgtgc
     4441 aggttgaacg cgaggtcttc cgcgggattc aaatgaaaaa tctcgccttg acgattgggg
     4501 tcttatttcc gatatagccg cctgtcctgc gtgggtctga attgctggag ctgcgcttct
     4561 aacatatgca acgtttttgt ggatggatgc gccccccgcc gattgcgatt tgggtcgcct
     4621 ccttttgtac actctttacg gtcgtaattg tccgggggca ggcgccacca tcggctccgg
     4681 gacctcccgt catccgcgcc atggaggtgc aatacacagg ccccgcaacg atcagcaaag
     4741 aacgcattct ggcgcagatg cgcacaaaag tgggccaggt gtattcgaat gaaatagtgc
     4801 aggaggacat caaggcgctg tacaagacgg gatacgttcg aaacgttcgg atttttgcgc
     4861 a
//
LOCUS       DATDAJ010000047         5876 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_242744, whole genome shotgun sequence.
ACCESSION   DATDAJ010000047 DATDAJ010000000
VERSION     DATDAJ010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5876
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242744"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..593
                     /locus_tag="VIS53_01065"
     CDS             165..593
                     /locus_tag="VIS53_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766400.1"
                     /translation="MKTPRFILALLALAFALAPQSPPTVFARPYPGQYSANLISPSPG
                     QVLVPGQVVRIQWTADFPGVDLTMCETEVLLSIDGGRTIYMMLTEQRNPKVQYFDWTV
                     PNAPTNEAVLDIRFGCLNIYPETPSLQVRSAFVISPSLNN"
     gene            681..1100
                     /locus_tag="VIS53_01070"
     CDS             681..1100
                     /locus_tag="VIS53_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766401.1"
                     /translation="MNLLRTCILSLILAPLGFLAVAATMPAQVTSGEKNRSVADAPSR
                     DDAAALQKKANEAQARIHENKDDSDQLKRAVKLNEVGLAKEVLLRNGFTAEDLENAKI
                     ILRSGGGKGGADELEISASCCDPKEITIQRSLENFTK"
     gene            complement(1303..2352)
                     /locus_tag="VIS53_01075"
     CDS             complement(1303..2352)
                     /locus_tag="VIS53_01075"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HEY5766402.1"
                     /translation="MKSQRALKNNTPSFEPSTRRIVFVTGPGVEILDLVGPLQVFARA
                     SEMHSRDNPGSPPIYSVEVVSISPSRSLIANCGVRLTADRSFREVRGKIDTLLVAGGD
                     AIEQNEINPEAVRWLKRISTRIRRVGSVCTGAMLLARAGLLDGRRATTHWNWCQTLIK
                     RAPRARVDADPIFVRDENVYTSAGVTAGMDLALAMVEEDHGSRLALQVARNLVLYLRR
                     PGGQSQFSAALSLQLTDRKPLRELETWVLDNLQKPLSVPLLAERVAMSPRNFARVFTK
                     EMKTTPAKFIERLRVEAARRRLEESHNSMEMIAGECGFGNVNSMRNVFQRTLKIAPGQ
                     YRRHFRHVKHPPRKT"
     gene            complement(2349..3338)
                     /locus_tag="VIS53_01080"
     CDS             complement(2349..3338)
                     /locus_tag="VIS53_01080"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEY5766403.1"
                     /translation="MNAHTINRIELVYRAVRFGLLLALGVLALSALFANEAPVKDDHS
                     NQNEITTDTTSLKPPAKGQIPVAFLISDGAVVIDFCGPWEVFQDVIIPSREEMPFRLY
                     TVAETKNPIRTSGGMQIVPDYTIENAPPPKVIVIPAQSPPNPAVLEWIRKSSKTTDVT
                     MSVCTGAFVLAKTGLLNGKSATTYHGAFGRFATQFPDIHLKRGARFVENGNLATAGGL
                     SSGIDLALRVVERYYGREVARKTAYEMEYQGEGWMNPESNQTYATSVVSTPEHPLCIV
                     CGMDVDPKVAPKSVFKGATYYFCSEDEKKTFDAAPDKFITAVTPSSAISGSSN"
     gene            3500..4111
                     /locus_tag="VIS53_01085"
     CDS             3500..4111
                     /locus_tag="VIS53_01085"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY5766404.1"
                     /translation="MKVLPFLILCFTTVAFADDFKLVGGKEYKNVIVTRVEPDGIVLK
                     AKSGISKVYFVELPKDVQERFHYNAAIASAYSAQQAVNQSMTAAAHRGEPIKVISHGA
                     QIDINQHLALGNVTVIDFYADWCGPCRRLSPSLEQMARSDPEIALRKIDIVNWKTAVV
                     QQFNIHSIPQVNVYDRSGRLVGTVLGVDFEKVKTYVAQAKSNS"
     gene            4187..4984
                     /locus_tag="VIS53_01090"
     CDS             4187..4984
                     /locus_tag="VIS53_01090"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEY5766405.1"
                     /translation="MKRPLLCFVVTLCAVSLVRADQAIQSLQQTLKSQGFYYGAVTGD
                     KSPETTAAIRRYQIRNGLQVTGEINEETLRSVNSSSNTVASAPQPAPKPAATQPNSVR
                     PDASARLSQSSPPPSFHQPNRPLETNPSYSASFYQSAPFRLNRRVIAGAQYQLMSRGY
                     FSGRVDGRWGARTAFAVRAFQSSAGLPPTGRLDIETVKALGSSETEFAYSSPASRGNE
                     TWMPVTKFKHGKWKVKWKKSHRPFVVEDGDEEQQANNGAAWNPYNHD"
     gene            5181..5513
                     /locus_tag="VIS53_01095"
     CDS             5181..5513
                     /locus_tag="VIS53_01095"
                     /inference="COORDINATES: protein motif:HMM:NF025715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4404 family protein"
                     /protein_id="HEY5766406.1"
                     /translation="MTDERIQKIKSAVEAADHISSEKKAEFLAVLAKLKPAIAEVAQT
                     SEEEAESISRFVEASAHEVASKKERPESVERVLHKLKQTVEKFEASHPQLTAFVTEYS
                     AVLSGLGI"
BASE COUNT         1390 a         1560 c         1604 g         1322 t
ORIGIN      
        1 aagtcggtgt cggtggctgg gtgtcacaca aaaagaggct gaatggaatg cgtttgaggc
       61 agcgtggaat tttttacggc gtgacgaacg acaaaacgat caagagcctg attgcggcgc
      121 aaactgttat tgacaattga cgctcactcg gatggagtaa aaacatgaaa actccacgat
      181 tcattctagc gctacttgca ttggcttttg ctttagctcc ccaatcgcct cccaccgtat
      241 tcgcgcgccc ttacccaggg caatacagtg ccaacctgat ctcgccgagc ccagggcagg
      301 ttttggttcc tggacaagtt gtgaggattc aatggacggc ggactttcca ggcgtggacc
      361 tgacgatgtg tgagacggaa gttctgcttt cgatcgatgg cggcaggacg atctacatga
      421 tgcttacaga gcagcgtaat ccgaaggtgc aatatttcga ttggaccgtg ccgaatgcgc
      481 ccacaaacga agcggtgctg gacattcgct tcgggtgtct gaatatctac ccggaaacgc
      541 caagccttca ggttcgatcg gcttttgtga tcagcccgtc gctgaataat tgattttatt
      601 ttcgcctgtg gctcaccggc tacagttcgt ctctcggatt gacagcggtt aggtagcaga
      661 ggtccttagc ctgtcccgcc atgaacctcc ttcgcacatg catcctatct ttgatccttg
      721 caccactcgg cttcttggct gttgcggcga cgatgccggc gcaagtgact agtggagaga
      781 aaaacagatc cgttgccgac gcaccgtcaa gagatgacgc ggcagcgctg cagaaaaaag
      841 ccaatgaagc ccaagcccgg attcacgaaa ataaagacga cagcgaccag cttaagagag
      901 ccgtaaaact taacgaggta ggtttggcca aggaagtcct cctccgaaac ggattcaccg
      961 cggaagattt ggaaaatgcg aagattattc tacggagtgg cggaggaaag ggaggcgcag
     1021 acgaactgga gatctctgcg agctgttgtg atcccaagga aatcacaatt cagcgatccc
     1081 tggagaactt cacgaaatag ttgttacaga cctgaggaat ttgcgaatca ggaaatcagg
     1141 aaccgaccgc ccgggaaaag atattcctgc cttcctgggt tcctgattaa attttctgcg
     1201 ttcctgcttt gaaagcctgg gtgttgcttc gccgcgtata aggcgtcgtt tgggtggcag
     1261 aaatcatgtc gtttacgcgg cttcgcattc gtcgcagcct gattacgttt ttcgaggcgg
     1321 gtgtttcacg tgacgaaagt ggcgacggta ttggccaggc gcgattttca gggtgcgctg
     1381 aaaaacgttg cgcatcgaat tgacgttccc gaagccgcat tcgcccgcga tcatttccat
     1441 gctgttatga ctttcttcca accgacggcg cgctgcttcg acgcggaggc gctcaataaa
     1501 ttttgccggc gtggtcttca tttctttcgt aaagacgcgc gcgaaattgc gcggactcat
     1561 cgcgacgcgt tctgccagca gcggcacgct gagcggtttc tgcaaattat cgagcaccca
     1621 cgtttccaat tcgcgcaatg gttttcgatc ggtcaattgc agtgataagg cggcgctgaa
     1681 ttgcgattgg ccgccgggcc gccgcaaata aagcaccaga ttgcgcgcaa cctgcagagc
     1741 gagccgcgaa ccgtgatctt cctcgaccat cgccagcgcg agatccattc cggctgtaac
     1801 cccggcggac gtataaacat tttcatcacg aacaaatatt ggatcggcat cgacgcgcgc
     1861 gcgcggagca cgtttgatca gggtctgaca ccagttccaa tgagtcgtgg cgcggcggcc
     1921 gtcgagcaaa cccgcgcgtg ccagaagcat cgcgccagtg caaaccgagc cgactcgccg
     1981 gattcgtgtg gagattcttt ttaaccagcg caccgcttcg ggattgattt cattctgctc
     2041 gatcgcgtcg ccgccagcca cgagcaacgt atcgatcttg ccgcgcactt cgcgaaagct
     2101 cctatcggcg gtcaagcgca caccgcagtt ggcaatcagc gaccgactcg gagaaatgct
     2161 cacgacttcg actgaataga ttggaggcga gccaggattg tccctggagt gcatttccga
     2221 tgcgcgggcg aagacttgga gcggtccgac caggtcgaga atctcgacgc cgggccccgt
     2281 cacgaagacg atccggcgcg tgctgggttc gaatgacggt gtgttgtttt taagggcgcg
     2341 ctgtgatttc aattagaaga gccagatatt gccgatgaag gcgtgacggc ggtgataaat
     2401 ttatccggcg ccgcgtcgaa agttttcttc tcgtcttctg agcaaaaata ataagtggcg
     2461 cccttaaaga cagatttcgg tgcaaccttt ggatcaacat ccatcccgca cacaatgcaa
     2521 agcggatgct cgggagttga gacaactgaa gtggcgtaag tctggttcga ttcgggattc
     2581 atccagcctt ctccctgata ttccatttca taagcggtct tccgggcaac ctcgcgaccg
     2641 taatagcgtt cgacgacgcg aagcgcgagg tcgattccgg aagacagacc gccagcggtt
     2701 gcgagatttc cattctcgac gaagcgcgcg ccgcgcttaa ggtgaatgtc cggaaactgc
     2761 gtggcgaaac gtccaaatgc gccatggtaa gtggtcgcag atttgccgtt cagcagtcca
     2821 gttttcgcca gcacaaatgc gcctgtgcaa accgacatcg tgacgtcggt ggttttcgaa
     2881 gattttctga tccattccaa taccgccggg ttcggtggac tttgcgcggg aatgacaatc
     2941 actttcggcg gtggggcatt ttcaatcgtg taatcgggaa cgatctgcat tccgccgctg
     3001 gtgcggatcg ggttcttcgt ttcggccacg gtgtacaaac gaaacggcat ttcttcgcgg
     3061 cttgggatga tgacgtcttg gaaaacttcc cacggcccgc agaagtcgat tacgactgcg
     3121 ccgtcggaaa tcagaaacgc gaccggaatc tggcccttgg ccggcggttt tagcgacgtt
     3181 gtgtcggtgg tgatttcgtt ctgattcgag tggtcatctt taaccggagc ttcgtttgcg
     3241 aacaatgcac taagggccag cacaccaagt gcaagtagga gaccaaatcg aaccgcacgg
     3301 taaacgagct ctattctatt gatcgtatgt gcattcatga tccaattctc ggatgacagc
     3361 tatgtggcag caacgacaac aatcatcata ttcctgccaa caacgagcct taatcaatcc
     3421 tatttctcat gaattgcgcc cgagaaaacg cttgcattgg acaacgtgag ccctcaaaaa
     3481 actctcgcct aatttcgtga tgaaggttct cccctttttg attctgtgtt tcacgacagt
     3541 cgctttcgct gacgatttca aactggttgg cggaaaagaa tacaagaatg tgattgtcac
     3601 tcgggtggaa cctgacggca tcgtgttaaa agcgaaatcg ggaatctcga aagtctattt
     3661 cgtcgagttg cccaaggatg ttcaggaacg ttttcattac aacgcggcga ttgcctcggc
     3721 ttattcggca caacaagcag tcaatcagtc gatgacggcg gctgcccatc gcggcgagcc
     3781 gatcaaagtg atttctcacg gcgcgcaaat cgacatcaat caacacctcg ccctgggcaa
     3841 tgtgaccgtt atagattttt atgcggattg gtgcggcccc tgcaggcggc tctcacccag
     3901 cctcgagcaa atggcgagga gtgatcccga gattgcgctg cgcaagatcg atatcgtcaa
     3961 ttggaaaacg gcagtcgtgc agcaattcaa cattcactcg attccgcagg tgaacgttta
     4021 cgatcgcagt ggccgtctag tcggcactgt actcggtgtc gatttcgaaa aagtgaaaac
     4081 ttacgtcgcg caagcgaagt cgaacagctg actggttacg cagaaacgcg cactcgcacg
     4141 cgcgcatccg aatccaatag cgagtcgaat attggctcga tgggttatga aacgaccgct
     4201 gctatgtttt gtcgtcacgt tgtgcgccgt cagtttggtg cgcgccgacc aggcgattca
     4261 atcgttacaa caaaccctca agagccaggg tttttactac ggcgcagtta cgggcgacaa
     4321 gagtcccgag acgactgcgg cgattcgccg ttatcagatt cgcaacggct tgcaggtgac
     4381 cggcgagatt aacgaggaga cgttgcgctc ggtcaattcg agttcgaata ccgttgcgtc
     4441 ggcacctcaa ccggctccaa aacctgccgc cactcaaccc aacagtgttc gtcctgatgc
     4501 aagcgcacgc ctgagccaaa gctcgccgcc gccgtcgttc caccaaccaa atcgaccgct
     4561 ggaaaccaat ccgtcatact cggcaagctt ctatcaatcc gcgccctttc gactcaaccg
     4621 ccgggtcatc gccggagcgc agtaccaact gatgagccgc ggatatttta gcgggcgcgt
     4681 tgatggaagg tggggggctc ggacagcttt tgccgtgcgc gcgtttcaat cgagcgctgg
     4741 acttccgccg actggacgtc tggacatcga gacggtgaag gcgcttgggt cttccgaaac
     4801 ggagttcgcg tattcgtcgc cagcatctcg cggcaatgaa acttggatgc ccgtgacgaa
     4861 attcaaacac ggcaagtgga aagtgaaatg gaagaagtct catcgtccct tcgtcgttga
     4921 agatggcgat gaagagcaac aagcaaataa tggggccgcc tggaaccctt acaaccacga
     4981 ctaggcaaat cgtcgtggat taagcgcgcg atctgctcag cgcattcaca aacggcgtac
     5041 ggatctgaat cagctgcgga tagcgaacgc tagagcaatt tttggctgat aaatgcttac
     5101 cggccgccgc ttccacacaa gttctccgtc gaggcgccaa aggagattgt agagaagtgc
     5161 gcaacggatg atattccgac atgaccgacg aacgcatcca gaaaatcaaa tcagcagttg
     5221 aggcggccga tcacatttcg tccgaaaaga aggcggagtt tttggccgta ctagcgaaac
     5281 tcaaacctgc tattgccgag gttgcgcaaa cgagcgagga agaagctgag agcatcagtc
     5341 ggttcgtcga agcttcagcg catgaagtcg ctagcaaaaa ggaacgaccg gaaagtgttg
     5401 agagagtttt gcacaaactg aaacaaaccg ttgagaagtt cgaagcttct catccgcagc
     5461 tgaccgcgtt cgttaccgaa tattctgcgg tgctctccgg cctgggaatc tgagttctgg
     5521 ccatcggaca gctcaacgcc gcgcgctacc ttcaacgctt gaagccgaac ttcgtcagtc
     5581 tgcatccatg aaaacttgaa gcagccaagt cagcgtttcc ccagttcgtc gaggaaaccg
     5641 cgaccgagaa acataaatgt caattcgagg gagcgttctt gcccagctgc gttttgttat
     5701 tcacgcgtca ccgcgaatga tttcccttgg gcaacaggta atgggcaacg gtccattcgc
     5761 cgatactgct gccagcttgc aatccgtcct cgcttgccga tcgaaagtga atgcccccgt
     5821 atattctgct caatgccgct tcctcagctg catcctggca cgtcgaaaag ctgcgg
//
LOCUS       DATDAJ010000048         6455 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_263474, whole genome shotgun sequence.
ACCESSION   DATDAJ010000048 DATDAJ010000000
VERSION     DATDAJ010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6455
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263474"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1104)
                     /locus_tag="VIS53_01100"
     CDS             complement(<1..1104)
                     /locus_tag="VIS53_01100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766407.1"
                     /translation="MQITDGNRAPNLLPVTLVLTVVLWIFTMTGGRDIFVNEVLGGAY
                     DSQAEHFLRGDVGVDADAIAHETMIVNGKVRMYFGPFPALLRVPLNFIYPAGHGKWSR
                     ISGFCAGVIALFAFAGLVTTALRSSPLSSRPRNWVGNACVIGFALGSPLLLLLGNLSI
                     YNEAIIWGFAWSVAALYFACRSRTTEGAALTRSLLGFSFCAGAALLSRATFGAPFVLI
                     APLLAIRLFHRQPIRNITALLLPLGAALLFYLFLSYARFGDFSGMNMRYNINPVQRDF
                     AVKHGLFRLERVPYSFADYFVLRSPKLQREAPFFKANRKDYDHESLYVMPFTETYSSL
                     LWSSSWILLGAVIGVAMLLRPRRADGVDRAIAAI"
     gene            complement(1160..1789)
                     /locus_tag="VIS53_01105"
     CDS             complement(1160..1789)
                     /locus_tag="VIS53_01105"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5766408.1"
                     /translation="MTLRAHESYGQHGLTPVDRLGVWLSRRAIRRHLPSRNDLEVLEL
                     GCGYRATQLIALESKLKRGIGVDFQIAPELQTLENFTFHQGSIEETLPNLESETVDVV
                     MLISVLEHLAEPQFVIQSAWRLLRGSGLLLVNVPTWSGKRFLELSAFRLGFSPKVEID
                     DHKMYYDKRDLWPMLVRAGFKPSQIRLRYHKFGLNLFAAARKENADQRN"
     gene            complement(1786..3015)
                     /locus_tag="VIS53_01110"
     CDS             complement(1786..3015)
                     /locus_tag="VIS53_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5766409.1"
                     /translation="MLNDVKSGTVSLGCGIEHLKPEGMTLGDVQLSIVIPAMNEELTV
                     GEFIEWCKEGLQRAGVIGQILIVDSSTDNTPKIVLEHGGEVLRVPKRGVGSAYLDSLP
                     YIRGKWILMGDADLTYDFREIAPFVEEFRKGAEFIMGSRFRGSIEKGAMPKLHRYFGT
                     PLTNWILNRIYRSNFSDIHCGIRGVTREALDRINITSRGWEYASEMVLKAARLKLISS
                     EVPIKFYKDREGRLSHHLRVGWRSPWLAGWVNLKVMLVYAADSFLLKAGAALLVIGLV
                     LSLGLAAGPVRIGRIGFSLYWMLLGVTCATLGYSSIQIGVLARVMHGLKPRFVDRLQK
                     IMTYDRGMIASAGLSVTGLVLLGNLTYHYLKRGLQLEAIWHPAILGLLLVILGFQTFG
                     FTLLMEVAKRIISRSRQ"
     gene            complement(3229..4620)
                     /locus_tag="VIS53_01115"
     CDS             complement(3229..4620)
                     /locus_tag="VIS53_01115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766410.1"
                     /translation="MKFLLLGLDPLPQLFMGDSGSYLFTAVSGWIPPDRSFLYGYVIR
                     WSSLGTGSLTSLLILQAFLAATTAILVAVICRCILGLTSGLSYLFGVLCSLDPLQLVW
                     ERYVMTETVSLFFYVFALFFSFLYLKQHRLWQLAIVEILSVFEIGFRMSYLLVAQISV
                     VLLPLIAFFPEIRAVFRKHSSTLSKASGLKSAGLHLVFSVLFMFLLQQGYRQLNGRLA
                     SREPALLNNTGLSVLTTWAPVLKPTDSPDPRLSELIARGNEFRLNDIWSRDGQLYSPG
                     GLANRWKQIEPNAVVSNQVAKQTALNALLRRPLDVVSLGAKTFLHYWNFKHIRRQAKA
                     ELGKTRNNWPDKKKWNVASHFRLVPPSAREVKTKTLSQRYFLRSQPYYYMVLLSPFLC
                     VGLIFFLTKGYVFLLCLHSWILFGTITILSKDASVRYLQPMSLLTILIFAALVKAVID
                     RRSQETSITATAT"
     gene            complement(4765..5136)
                     /locus_tag="VIS53_01120"
     CDS             complement(4765..5136)
                     /locus_tag="VIS53_01120"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY5766411.1"
                     /translation="MLRDYLPVLLQIIVVALFAVSALLTSILVGKRGRRTRAKDTAYE
                     CGMIPQGGPQPRFSVKFYVVAMLFILFDLEIVFMYPWAVVYRDAIKQGSTIFWSMLSF
                     ITILMVGYVYALKKGALDFRK"
     gene            complement(5177..5488)
                     /locus_tag="VIS53_01125"
     CDS             complement(5177..5488)
                     /locus_tag="VIS53_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766412.1"
                     /translation="MAILKKNAFSRRVPDLVTEELVAVLSRRSSFEFKQLFDIVHENL
                     RARNAASGGEEMLRLRAYEKLQNLVARGAVKKNGKKYKGLPSALAAAIAQQNGHLAGV
                     K"
     gene            complement(5646..>6455)
                     /locus_tag="VIS53_01130"
     CDS             complement(5646..>6455)
                     /locus_tag="VIS53_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766413.1"
                     /translation="MDTLNQAAAFAGTKIFQALSDSGITAADWKAAFGIELGSLANWP
                     SSAHWPSLLVTLPVTDATKARQIVEALLRAEEEGSWTATEKDGVRYFSKQSAASFVAI
                     TPTIALSDRILIAGLDPASVEEAIKRARGSSSELADSQSYKGADRLLPAPTNFFAYID
                     TVQLYSRLDASLRPMLLMAAAFVPAVAGSIDPTKLPAPEIITKHLSPIVSSQRYDGDG
                     YMAESIGPITLDQLGIGVAIFSSFGAAAARQTGWGAPATALSPTPSPSPTP"
BASE COUNT         1659 a         1748 c         1682 g         1366 t
ORIGIN      
        1 aatcgcggcg atggcgcggt ccacgccgtc agcacgtcgg ggtcgcagca acatcgccac
       61 gccgatcacc gcgccgagca gaatccagga tgaagaccac aagagcgaag agtacgtctc
      121 agtgaaaggc atcacataaa gactctcgtg gtcataatct ttccggttcg ctttgaaaaa
      181 cggggcctca cgctgcagtt tgggacttcg caagacgaaa tagtccgcaa aactgtaagg
      241 cacacgttcg agacgaaaaa gcccgtgctt taccgcgaaa tcgcgttgaa ccggattgat
      301 gttatacctc atgttcatcc cgctgaagtc gccgaatctc gcgtagctaa gaaaaaggta
      361 gaaaagcaat gcagcgccga gcggcagaag cagcgcagta atgttccgga tgggctgtcg
      421 gtggaacaaa cgaatggcaa gtagtggtgc aatcaggacg aaaggcgcgc cgaacgtcgc
      481 ccgtgaaagt agagccgcgc cggcgcaaaa cgaaaaccca agcaatgacc gcgttaacgc
      541 tgcgccctca gttgttcgag atcggcacgc aaaatagagc gcagcgacgg accacgcgaa
      601 cccccagatg attgcttcgt tgtagatgga cagattgccc agcaacaaca gcaacggtga
      661 gccaagcgcg aacccgatca cgcaggcgtt accgacccag ttacgcgggc gcgacgaaag
      721 cggggatgaa cgcaacgcag ttgtcaccag accggcaaac gcaaacagcg cgatgactcc
      781 cgcgcaaaat cctgaaatcc gcgaccattt cccgtgtccc gctggataga tgaaattcag
      841 cggaacgcga agcagcgcgg gaaacggccc aaagtacatc cgtactttgc cgttcacgat
      901 cattgtttca tgtgcgatcg catctgcatc gactcccaca tcgcctcgca aaaagtgttc
      961 cgcctgcgag tcgtaggcgc caccgaggac ttcgttaaca aaaatatctc gcccgccagt
     1021 catggtgaat atccacagga ccacggtgag aacgagagtg acgggtagaa gattcggcgc
     1081 ccggttgccg tcagtgatct gcacaggaag taatatatgc cggctgaaac gtgatcagtc
     1141 gaggatctga ccagtttcgc tagttacgct ggtcggcgtt ctccttcctg gcagctgcga
     1201 aaagattcaa accgaacttg tgataccgca atcggatctg acttggcttg aacccggcac
     1261 gaacgagcat cggccagaga tcgcgtttgt cgtaatacat tttgtgatcg tcgatctcta
     1321 ctttcggact gaatccgagc cggaatgcgg acaactcgag gaatcgcttc ccgctccacg
     1381 tcgggacatt caccaatagc aaccctgagc ctctaagcaa gcgccacgca gattggatga
     1441 caaactgcgg ctcagccagg tgttccaaca ccgagatgag catgacgacg tccactgttt
     1501 cgctttcgag gtttggcaac gtttcttcga ttgacccttg atggaaggtg aagttctcca
     1561 gcgtttgcaa ctccggcgcg atctgaaaat ccactccgat gcctcgcttc aattttgatt
     1621 ccaaggcgat caactgcgtg gcgcgatagc cgcaaccgag ttccaacacc tccagatcgt
     1681 tgcggctggg cagatgtcgg cgtatcgcgc ggcgagatag ccacactccc aggcgatcga
     1741 ccggagtcag tccgtgctgc ccataacttt catgcgcgcg cagagtcact gccgggatct
     1801 tgagatgatg cgttttgcca cttccatcag caacgtaaag ccgaacgttt ggaatccgag
     1861 gataacgagc agtagaccga gaatagcagg gtgccaaatc gcttcgagtt gcagtccgcg
     1921 tttcaaatag tgataggtca gattccccag aagcaccagg cccgtgacgc ttagaccagc
     1981 tgacgcgatc atcccacggt cgtaggtcat gattttttgt agccggtcca cgaaccgagg
     2041 ttttaatccg tgcatgacgc gcgcaagaac tccgatttga attgagctgt aacccaaagt
     2101 tgcgcacgtc actccgagca gcatccagta caggctaaag ccaattctcc caatcctcac
     2161 cggtccggct gccaggccga gagaaagcac taacccaatt accaaaagcg cagcaccggc
     2221 cttaagcaag aatgaatctg ccgcgtaaac caacatcact ttcaggttga cccaacccgc
     2281 gagccacggc gatcgccagc ccacgcgcaa gtgatgactc agtcgtcctt cgcgatcctt
     2341 gtaaaacttg atcggcactt ccgaactgat gagtttcagt cgcgccgcct tcagcaccat
     2401 ttcgcttgcg tattcccagc cacgcgacgt gatgttgatt ctgtccaatg cttcacgagt
     2461 cacgccgcgt atcccgcaat ggatgtcgga aaagttgctg cgataaatcc ggttcagaat
     2521 ccagttcgtg agaggcgtgc cgaagtaacg gtgcaatttc ggcatcgcgc ctttttctat
     2581 gctgcctcga aaccggctgc ccatgataaa ctccgcgcct ttccggaatt cctccacgaa
     2641 cggagcgatt tcgcgaaaat cgtaagttag gtcggcgtcg cccattaaaa tccattttcc
     2701 gcgaatgtac ggaagtgagt ccaagtatgc gctaccgact ccacgcttcg gaacgcgtaa
     2761 aacctcgccg ccgtgttcaa gcacaatctt cggcgtattg tcagtcgagc tgtcgacgat
     2821 gaggatctgc ccgatcacac cggcgcgttg aagaccttcc ttgcaccact cgataaattc
     2881 gcccacagtg agttcttcat tcatagcagg gatgacgatg ctcagttgta cgtctccgag
     2941 cgtcatgccc tccggcttaa gatgttcaat gccgcaaccc aaagatacag tcccagattt
     3001 tacgtcattc agcatttagt ttctccgggc ttacggcttt ggcgatgtcg gtgtctgcgg
     3061 cccaatggtg gattgtttca catcttccga tcgcgtcggc gcgagtgtca ggatcattct
     3121 tctgcaatat gtaaagggaa ggccacctgc ccatcgaaat aagagtgtga ccaaggatta
     3181 tcgaatatca tcacgcggct aagcttcttt tcttgtattg gtgacgattc aagtggctgt
     3241 cgctgtgatc gatgtctcct gagatcgtcg atcaatcaca gctttcacca atgcagcaaa
     3301 aatcagtatt gtgagcagag acattggttg aaggtatcgc acactagcgt ccttcgagag
     3361 aatggtaatc gttccaaaga gaatccagct atggaggcaa agcaaaaaaa cataaccctt
     3421 ggtcaggaaa aatatgagcc cgacacaaag gaagggagat aacaggacca tgtagtagta
     3481 gggctgtgaa cgcaaaaaat accgttgcga cagcgttttt gttttaacct ctcgtgctga
     3541 cggcggcacc aaacgaaagt gactggccac attccatttc tttttatccg gccaattgtt
     3601 tcgcgtcttt cctaactcag ccttagcctg tctacggatg tgcttgaaat tccagtagtg
     3661 taaaaacgtc ttggcgccta gcgagaccac gtccagtggg cgacgcaaca acgcattcaa
     3721 cgctgtctgc ttcgctactt ggttcgagac cacggcgttc ggctcgatct gtttccatcg
     3781 gttggcaagg cctccaggcg aatagagctg accgtccctt gaccagatgt cgttcagtcg
     3841 aaactcgttg ccccttgcaa tcaactcgga taagcgggga tcgggagaat cagtcggttt
     3901 aagaacaggc gcccacgtcg ttagcacgct aagcccagta ttattcagaa gggcaggttc
     3961 tcgactcgcg agcctaccat tgagttgccg atagccttgc tggagaagaa acataaataa
     4021 aacgctgaat accaggtgta gtcctgccga ctttagtccg gaagccttcg ataatgtgga
     4081 ggaatgtttc ctaaacactg cgcgaatttc tggaaaaaaa gctataagcg gtaacaaaac
     4141 gacactgatc tgagcaacaa gtagataact catcctgaag cctatctcga acaccgacag
     4201 tatttcgaca attgctagct gccaaagacg gtgctgcttc aggtataaaa acgaaaaaaa
     4261 caatgcgaag acgtagaaga aaaggctaac ggtctccgtc atgacgtagc gctcccatac
     4321 caattgcaat ggatccagcg aacaaagaac cccaaaaaga taggacaagc cagaagtgag
     4381 tcccaaaata caccggcaga taactgcaac taaaattgcc gtcgtggcgg cgagaaaagc
     4441 ctgaaggatt agtaatgaag tcagacttcc cgtcccgagc gatgaccagc gaatcacata
     4501 cccgtataaa aatgagcggt ccggaggaat ccacccggac actgcggtaa acagatagct
     4561 tcctgagtct cccataaata gttgtggcaa tggatcgagt ccaagaagaa ggaacttcaa
     4621 tgccaggatc agaaagcaaa ataaccacca atgtccgtcc gcgaaaaagc tgaaataagc
     4681 agtaagcctc gttgcggctg gtgccttaaa catcggaaag aggatgacgc gttaggatgt
     4741 catcccattt gaagttgctt gggcttactt tctgaaatcg agcgcgcctt ttttgagggc
     4801 gtacacgtag ccaaccatca ggatcgtgat aaagctgagc atgctccaga agatcgtgct
     4861 gccttgtttg atcgcgtcgc ggtaaacgac cgcccaagga tacataaaca cgatctccaa
     4921 gtcgaacagg atgaagagca ttgccacgac atagaattta acgctgaagc gtggctgcgg
     4981 tccgccctgc ggaatcatcc cgcattcata agcggtgtct ttcgctcgtg tgcgtctgcc
     5041 gcgtttgcct acaaggatgc tggtgagcag cgctgaaaca gcaaacagag cgacgacaat
     5101 gatttgcagg aggaccggca aatagtcgcg caacatccgg taagttggct tgaagccagc
     5161 ccgtctataa aaccggctac tttacgccgg cgagatgacc attctgctgt gcaattgccg
     5221 cggccagagc cgacggcaag cccttgtatt tcttaccatt ctttttgacc gcaccgcgcg
     5281 ccacgaggtt ttgcaacttc tcgtaggctc gcagccgcag catttcctcg ccgccgctcg
     5341 cagcgtttcg cgcccgaaga ttctcgtgca cgatatcgaa aagctgcttg aactcgaacg
     5401 aagaacgcct cgagaggaca gcaaccagct cctcagttac cagatcggga acccgacggg
     5461 agaatgcatt tttctttaga atagccatag ggcgcgaatg atagcagaat tttgagaaat
     5521 tgcagcagtt ttctttcgct ttcgttaggg aaactcgagc cgtgccggaa tggcacagct
     5581 gggggagctt gggtccggca gttttgcgag tttcgagcgg gggaaaaccg caaagttcgg
     5641 ctatttcaag gcgttggaga tggactcggg gttggggaaa gcgctgtggc aggggcgccc
     5701 caaccagtct gccgcgcagc cgccgcaccg aaactgctaa aaatggcaac gccgattccc
     5761 aattgatcca aggtaatggg tccgattgac tcagccatgt aaccgtcgcc gtcgtatcgc
     5821 tgtgaagaaa caatagggct cagatgtttc gtgatgattt ccggcgctgg cagtttcgtg
     5881 ggatcgatcg agccagcaac cgccgggacg aatgccgcag ccattaacaa catcggccgc
     5941 agcgaagcgt ccagccgcga atacaactgc actgtatcga tgtaggcaaa aaagttcgtg
     6001 ggcgctggaa gtaggcggtc cgctcccttg taactttgag agtctgcaag ctcagacgag
     6061 ctgccacgtg cgcgcttaat tgcctcttcc accgacgcgg gatccaaacc agcgattaga
     6121 atccgatcag acaaagcgat cgtaggggtg atcgcgacaa agctggcagc agattgcttc
     6181 gaaaaatagc ggacgccatc tttctcggta gctgtccacg agccttcttc ctcggcccgc
     6241 aagagcgctt ccacgatctg ccgtgctttg gtcgcgtcag tcaccggcag ggtcacaagc
     6301 agcgacggcc aatgtgcgct ggaaggccaa ttagccaaag atccgagctc tatgccgaat
     6361 gccgctttcc aatccgcggc agttatccca ctatcgctaa gcgcctgaaa aatcttcgta
     6421 cccgcaaagg cggcggcctg gttgagagtg tccat
//
LOCUS       DATDAJ010000049         3182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_264581, whole genome shotgun sequence.
ACCESSION   DATDAJ010000049 DATDAJ010000000
VERSION     DATDAJ010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264581"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..918
                     /locus_tag="VIS53_01135"
     CDS             <1..918
                     /locus_tag="VIS53_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766414.1"
                     /translation="KIDLSPEHKYSGTLDAWTNDLRDYLSTFLGPPRQKGGAIPVEFQ
                     ATIDSSQWDTRGVIHLPKSSPLSFTANFPLPIGITWNAFQMSPIQVSLDFPAVFLAAV
                     PQFFHSNILEDGILSGKLSLSETLARPRIVGELQLVNGKLAISDSFLNVIGASTLAIF
                     DGNHASLEFLNLATKDVDLAFRGEIDFENTKHVVVRIAGATPIFDLMSRAVDCVNKIE
                     ITPAALPLAPAATELEFRGPLLESGWSVSLKEEIGSQFSIVPTTDRAERILPVCFGTG
                     PEEKTLLLGAVPRAEASPKVNPKNREKPR"
     gene            complement(924..>3182)
                     /gene="dnaE"
                     /locus_tag="VIS53_01140"
     CDS             complement(924..>3182)
                     /gene="dnaE"
                     /locus_tag="VIS53_01140"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEY5766415.1"
                     /translation="EYVRQKYGARRVAQIITFGKLKAKSVVRDVGRVLGWSYRDADRI
                     AKMIPNELNITLETATAKNAELKRAIASEPPTRQLFEHAKLLEGLSRNAGVHAAGVVI
                     ADRDLSDYIPLCHDVKGNDVISQYAMGPLNDLGLLKMDFLGLKTLTVIEDTLALIHKR
                     DPNFSLKDIPLNDAAAFALYNRGETIGLFQMESGGMTSLSKQLDVKKLDDIIALIALY
                     RPGPMELIPEYVKAKKGITPIKYLHPLLEGICADTYGVMIYQEQVMAAASKLAGYSLA
                     QADLLRRAMGKKDKEKMAKERRNFIEGCAHTNKIPENKANAIFDLLEKFAGYGFNKSH
                     SAAYGVISYQTAFLKAHYPVEFMAGLLSNEINNTEKISVFVGECKRMGISILPPDINK
                     SGLKFTPETWEGPQRPDSCGIEAAPTLDAIRYGLAAIKNVGEAAMAIAIRERNQRGEF
                     SSLEDFCTRLDSRLANRKMLESLIKAGAFDFTGRDRAELFACIDESLNASAIAQRDRA
                     AGQVSLFDEQMHAATAVRRQPIKPWNEHEKLSYEKELLGFYVSGHPLDAYAGVFAAKK
                     YRSIASLGELDDHAQFKIAGAIVEVEKKFTKKEGKPFAVVWLEDLMDVLEVVVWNEVY
                     LKVSDNLLPGRVVELKATLDRRDEMVRATALEIKPLAVATFNGATERSEDTSKMAAIC
                     LQFSSATTGDELREVRNILVSSPGRHPVQLLFDRGDGNSLRLDAGTEFRVNLTPDLAQ
                     KLSRWLVTGQHQ"
BASE COUNT          675 a          909 c          804 g          794 t
ORIGIN      
        1 aagatcgatc tttcaccgga gcacaagtat tcagggacac tcgacgcctg gacgaacgat
       61 ctgcgcgatt acctatcgac ttttctcggg ccaccacgac aaaaaggggg cgcgattccg
      121 gtagaatttc aagcaaccat cgattcgagc cagtgggata cgcgcggcgt gattcacctg
      181 cccaaatcga gtccactcag tttcaccgcc aattttccac tgcccatcgg gatcacctgg
      241 aacgcatttc aaatgtcacc catccaggtt tcgctggatt tcccggcagt ttttctggcg
      301 gccgtacctc agtttttcca ctcgaacatc ctggaagatg gcatcttaag tggaaaactc
      361 tctctctccg aaacgttggc gcgtccccgc atcgttggtg aactgcagct cgtaaacgga
      421 aaactcgcca ttagcgactc tttcttaaac gtgattggtg ccagcaccct ggccattttt
      481 gatggcaatc acgcgtctct cgagtttttg aatcttgcaa ccaaagatgt agatctcgcc
      541 tttcgcggag aaattgattt cgaaaatacg aagcacgtcg tggttagaat cgccggagcg
      601 acaccgattt tcgatctaat gtcgcgtgcg gttgactgcg taaacaagat tgaaattacg
      661 ccggcggccc tgccacttgc tcccgccgcc actgagctgg agtttcgcgg ccctcttctt
      721 gaatccggct ggagcgtcag tttgaaagaa gagatcggca gccagttctc catcgttccc
      781 acgacggacc gtgccgagcg cattcttccc gtttgctttg gaacgggccc cgaggaaaaa
      841 acattattac tgggcgccgt gccgcgtgct gaagcttccc caaaggtaaa tccaaaaaat
      901 cgagagaaac cgcgatagct cggctactgg tgttgcccgg tcacaagcca acgggaaagc
      961 ttctgcgcca aatccggggt aaggtttact ctaaactcgg tgcccgcatc cagccgcaac
     1021 gaattgccgt cgcctcgatc aaacagtagt tgaactggat gccgtccggg tgagctgacg
     1081 aggatgttgc gaacctcacg caactcgtcg cccgtcgtcg ccgaagaaaa ctgtagacaa
     1141 atcgcggcca tctttgacgt gtcttctgat ctttcggttg cgccattgaa tgttgccact
     1201 gccaatggtt taatttccag agccgtagcg cgaaccattt cgtcgcgtct gtccaaggtc
     1261 gctttcaatt caacaacacg cccgggcaag agattatccg agaccttcag gtaaacctcg
     1321 ttccacacga ccacctcgag cacgtccata agatcttcga gccagacaac cgcaaatggc
     1381 ttgccctctt tcttcgtaaa ctttttctcg acctccacga tcgctcccgc gatcttgaat
     1441 tgcgcgtgat cgtccagttc ccctaacgag gcgatggatc ggtatttttt tgctgcaaaa
     1501 acgccggcat aagcgtccag cggatggccg ctgacgtaaa acccgagaag ctctttctcg
     1561 taggaaagtt tttcatgctc gttccatggt ttgattggtt gccgcctcac tgcggtggca
     1621 gcgtgcattt gctcatcgaa aagcgaaacc tgtccggctg cccgatcgcg ctgcgctatt
     1681 gccgacgcgt ttagcgattc atcgatgcag gcgaagagtt ccgcgcgatc ccgtcccgta
     1741 aaatcaaatg cgccagcctt gataagactt tccagcatct ttcgattggc caggcgcgaa
     1801 tcgagacgcg tacaaaaatc ctcgagcgaa ctgaactcgc cacgttgatt tcgctcgcga
     1861 atggcgatcg ccatcgctgc ctcgccgaca tttttgatcg cagccaggcc gtaacgaatt
     1921 gcatccaatg tgggagcggc ttcaatgccg caactgtcgg gccgctgagg cccctcccac
     1981 gtttctggtg tgaatttcaa accgctcttg ttgatgtccg gtggcagaat ggaaatcccc
     2041 atccgtttgc attcgccgac gaacaccgaa attttttctg tgttattgat ttcgttactc
     2101 agcaagccgg ccatgaattc caccggataa tgcgccttga gaaaagccgt ttggtaacta
     2161 atcacgccat acgccgcgct gtgactcttg ttgaacccgt aaccggcaaa tttttccagc
     2221 aggtcgaaaa tggcgttcgc tttgttctca gggattttgt tcgtgtgcgc gcagccctcg
     2281 atgaaattcc tgcgttcttt cgccatcttc tccttgtctt tcttacccat ggcgcgccgg
     2341 agaagatcgg cttgcgcaag cgagtagccg gcaagtttgc tcgcagcagc catcacctgt
     2401 tcctggtaaa tcatcacgcc gtaggtgtcg gcgcagatgc cctcgaggag cggatgcaga
     2461 tattttatcg gtgtgatccc ctttttcgct ttcacgtatt ccgggatcag ttccatcggg
     2521 ccgggccgat acagcgctat caacgcgatg atgtcgtcga gctttttgac gtcgagctgc
     2581 ttcgagagac tggtcatacc gccggattcc atctggaaca gtccaatggt ttcgccgcgg
     2641 ttgtagagcg cgaaggcagc ggcatcattc agcggaatat cttttagcga aaagtttggg
     2701 tcgcgtttgt gaatcagcgc cagcgtatcc tcgatgacgg tcagcgtttt caatccgagg
     2761 aaatccattt tcagcagtcc cagatcgttt agcggtccca tggcgtattg gctgatcacg
     2821 tcattgcctt tcacgtcgtg gcaaagcggg atgtaatcgg acaaatcccg atctgcaatg
     2881 accacacctg ccgcgtgcac gccagcattg cgcgacaaac cttcgagaag ttttgcgtgc
     2941 tcaaacagct gccgtgtcgg cggctcgctg gcgatcgcgc gtttcagctc cgcgttcttt
     3001 gccgttgctg tttcgagcgt gatgtttagc tcgttcggaa tcatcttcgc aatgcgatct
     3061 gcatcgcgat agctccatcc cagcacgcgt cccacgtcgc gcaccacgct ttttgccttg
     3121 agcttgccga atgtaatgat ctgtgcgacg cggcgcgcgc cgtatttttg tcgaacgtat
     3181 tc
//
LOCUS       DATDAJ010000050         2922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_267134, whole genome shotgun sequence.
ACCESSION   DATDAJ010000050 DATDAJ010000000
VERSION     DATDAJ010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267134"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..1194)
                     /locus_tag="VIS53_01145"
     CDS             complement(220..1194)
                     /locus_tag="VIS53_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEY5766416.1"
                     /translation="MAADAIRIERPTTNSKLFAHTRWDAVPAAAGLFHLAYLLALYFL
                     FPHTPLWVMLILGFVYALMVNANINGVGHNFIHNPFFRSQLLNRLFGITQSIACCFSQ
                     TMYDAVHMQHHKGNSDRQDEKGDTIDWLSIYRHGHDGEAENPWSYVFLSFFRDDVGTI
                     RKDLRKRKNGDDFWGNIELTAFATTLLVMAIIVPSNPIHFINWRFMLYFLPFWYLGHC
                     FSYLNGYYRHYGANPDKPIAWGVSSYGKIYNCLFFYNGYHAEHHFRPKVHWTKMEKFR
                     RNIEHLQKQEGVRTIRHAHMLGFLDPDLPKRGGRDRAPEREDATSLAR"
     gene            1357..2331
                     /locus_tag="VIS53_01150"
     CDS             1357..2331
                     /locus_tag="VIS53_01150"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016445698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEY5766417.1"
                     /translation="MFALQPELKVFTGSANRDLAERICKYIGVPLGQATISSFPDGET
                     YVRIEENIRGHDVFIIQPTCPPTNQHLMELLIMVDAARRASADRITAVIPFFGYARQD
                     RKDQPRVPITAKLVANLLHAAGVSRVLTMDLHAQQVQGFFDIPVDHLYSLPVLIKYLR
                     QQLTGKTTVVSPDLGGLKMASAYAEALGANLAIVAKERKSATETEAAYLIGEVEGSDV
                     LLVDDLTETAGTLTSAAELLEKRGAQKIYAGVSHAVLVDLAIKRLQKSKIAELVTTNS
                     TPVRTVEGFKVTVLCVSELLGEGIKRIHNDESVSSLFNIENEKNGKTS"
     gene            2315..>2922
                     /locus_tag="VIS53_01155"
     CDS             2315..>2922
                     /locus_tag="VIS53_01155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HEY5766418.1"
                     /translation="MAKQVKLKAEPRPTVGRSAVRKLRARGLIPAVIYGGDEKPQPLQ
                     VSARDINAMMSQASGENVLVELEIGSDGQSRTALVQEVQHSPVRGEIRHVDFHAISMD
                     QMIQAEVPLEPIGTAVGVKTFGGLLEQSLRALAIECLPADLPDRITVDVSQLNIGDAI
                     HVRDIQLPQGVTPKVQIDLTAFSVVAPVVEEEPVAAEAEAAAA"
BASE COUNT          694 a          786 c          825 g          617 t
ORIGIN      
        1 gatcagattg gaaaggcaca gaccgagggc aaggtcgacg atattgattc tctggagaag
       61 caactcgcct ccgatgtccg ccggttacag gaggagtgcg aagcagccaa agaaaaacgg
      121 cgcgcgagct ttgcgaaact gtagccgcgt ctctgtgaga cgcgcaccgc acgtgatgca
      181 agcacctctg cgcctcgcgc agcgaggcgg ctacaacaat tatctcgcca gcgaagtagc
      241 gtcctcgcgc tcaggcgcgc ggtcgcggcc gccacgtttc ggtaaatcag gatcgagaaa
      301 gccgagcatg tgcgcatgcc taatcgtgcg cacgccttcc tgtttctgca ggtgctcgat
      361 gttccggcgg aatttctcca tcttcgtcca gtgaactttt ggacggaaat gatgttcggc
      421 gtgatagccg ttgtagaaaa acaggcagtt gtaaattttt ccgtaactgc ttacgcccca
      481 cgcaatcggc ttatccggat ttgcgccgta gtgccggtag tagccattca agtaactaaa
      541 acaatgaccg agataccaga acggcaggaa atacaacatg aatcgccagt taatgaagtg
      601 aatcggattc gacggcacga tgatcgccat gaccaaaagc gtcgtagcga atgccgtcag
      661 ctcaatgttg ccccagaaat catcgccgtt cttccgtttc cgcaggtcct tgcggatcgt
      721 accgacgtcg tcgcggaaaa aactcaaaaa aacatagctc cacggatttt cggcctcgcc
      781 gtcatggccg tgtctataga tcgataacca atcgatcgtg tcaccttttt catcctgccg
      841 atcggagttc cctttgtgat gctgcatgtg gaccgcgtcg tacattgtct gagagaaaca
      901 gcaggcgatc gattgcgtga taccaaacag acgattgagc agttgtgagc ggaaaaacgg
      961 gttatgaatg aagttgtgcc ctaccccatt gatgttcgca ttcaccatca gcgcataaac
     1021 gaacccgaga atcagcatca cccacagcgg ggtatgcgga aacaaaaagt acagcgctag
     1081 aagatacgcg agatgaaaaa gccccgccgc ggctggaacg gcatcccagc gtgtgtgcgc
     1141 gaagagcttc gaattcgtgg ttgggcgttc tattcggatc gcgtcagcag ccatggttct
     1201 attcggtttt gggagatcag ataccttggc ggataaccgg cttttggcaa gacaccggcg
     1261 gcaactcagt cgtccgagga ggccagtttt tgtcgcaccg ccgtcaaatc cgggtttgct
     1321 aattttagtc gtgtccgcct attgtagccg cttgcgatgt tcgcgcttca acctgaacta
     1381 aaagtcttca ccgggtccgc gaatcgcgat ttggccgaac ggatttgcaa atacatcggg
     1441 gtcccgctgg ggcaggcaac catcagttcg ttccccgatg gcgaaactta cgtcaggatc
     1501 gaggagaaca ttcgcgggca cgatgtgttc atcattcaac cgacgtgtcc gccaaccaat
     1561 cagcatttga tggagctgct gatcatggtg gacgcggcgc gccgcgccag cgctgatcgg
     1621 atcacggccg tcattccatt cttcggatac gctcggcagg accgcaaaga tcagccgcgc
     1681 gtgccgatca ctgcgaaatt ggtagccaac ttgttgcatg cggccggtgt gagtcgggtg
     1741 ctcactatgg acttgcacgc acagcaggta cagggcttct tcgatatccc ggttgaccac
     1801 ctctattcgc ttccggtgtt gatcaaatat ctgcgacagc agcttaccgg gaaaacaaca
     1861 gtcgtttccc cggacttggg tggcctaaaa atggcttcgg cgtatgcgga ggcacttggc
     1921 gcgaatctgg cgatcgtcgc caaagaacgc aaaagcgcga cggaaaccga ggcagcgtat
     1981 cttatcggtg aagtggaagg cagcgatgtg ctcctcgttg acgacctcac cgaaacggcc
     2041 ggcacgttga cgtctgcggc tgagcttttg gaaaagcgcg gcgcacagaa gatttacgcg
     2101 ggtgtttcgc acgccgtgct agtcgatcta gccatcaaac ggttgcaaaa atcgaaaatc
     2161 gcggaattag taaccaccaa cagcacgcct gtgcgcaccg tggaaggatt taaggtcacg
     2221 gtgctctgtg tctccgagct tctcggggaa ggcattaaac ggattcacaa cgacgaatcg
     2281 gtatcgtcgc tgttcaacat cgagaacgaa aaaaatggca aaacaagtta agcttaaagc
     2341 agaaccacgg cccactgtag ggcgctccgc tgtccgcaaa ctcagagcgc gcggactcat
     2401 cccggcggtc atctacggag gcgacgagaa accgcagccg ctacaagtct ccgcgcgaga
     2461 catcaacgcg atgatgagcc aggcgtcagg agaaaacgtc ctggtcgagc tcgaaattgg
     2521 cagcgatgga caaagccgca cagcgcttgt gcaggaagtt caacactcgc ctgtccgtgg
     2581 cgagattcgt cacgtcgact ttcacgccat ctccatggac cagatgatcc aggctgaggt
     2641 gccactcgaa ccgatcggca cggctgttgg cgtgaagact ttcggcggat tactcgagca
     2701 gagcttgcgc gcattggcga ttgagtgttt gccagccgat ttgccggacc ggattacagt
     2761 ggatgtttcg cagctgaata ttggcgatgc cattcacgtc cgcgacattc aacttccaca
     2821 gggtgtaacg ccaaaggtgc aaatcgattt gacggccttc tccgtggtgg cgcctgtggt
     2881 tgaggaagaa ccagttgcag cggaagctga ggctgctgcc gc
//
LOCUS       DATDAJ010000051         7195 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_271119, whole genome shotgun sequence.
ACCESSION   DATDAJ010000051 DATDAJ010000000
VERSION     DATDAJ010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7195)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7195
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271119"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2980)
                     /locus_tag="VIS53_01160"
     CDS             complement(<1..2980)
                     /locus_tag="VIS53_01160"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY5766419.1"
                     /translation="MPALSKDDKLRLLRIILESRHADLREQNLIRQGKGHFHVSGMGH
                     EGLAAVSIQMERDDYIVSYYRDRGLVLGRGMTTRQLGLEYFAKRNTGSGGRQMPSHYS
                     DADLHIWSVPTPTGSQLLPACGIAWGIKLDGNKNVVVTTIGDAATRQGDFFEAICFAK
                     EKKLPMLFLVEDNAYGISMPTRKTNPLALDILEQDNWRQIEGHDVQQIYDATAEAFEK
                     IRAGGGPFFFWIKMERLSSHTSSDDQKLYRSAEELRDLEKADPLTFWKDRLIKEGVIT
                     PEDYAELDNEIKERVRREYAEAEKAEDPSPNELLANVTKPPPKIEKEILTPGKYRIGD
                     TVNRTLHAGLEEDPQRILFGEDIEDPKGGVFRLTQKLSTEFPKQVFNSPLAESTILGV
                     ACGLAAYGKRPVFELQFIDFIYPGFNQLVTNISTLRWRSFGNWKCPAVIYAPYGAYLP
                     GGSLWHSQANESALAHYPGLNVVVPSTPADAAGLLWTAMHAEDPVIFLVAKHLLWADH
                     EYNEPIRAVPLGKARNVREGSDVTLVAWGNAIEKSLEALNKIGNEISVELIDLRSIVP
                     WDAVAIEESVRKTRRLVVVQEDTENCSVGQMIISHVTGNPELWNELLSPPILVSKPNV
                     VIGYNPIYEYAALPDVERIVTAIRRSISTRHERATVGAGVDRTRSAQESKFAQPASSA
                     LAKATTDRPPTATTQTTEQHVQSITVPIMGEGIRNAKIVSFLKKPGEQIQLDDELCEV
                     ETDKAVYPIQSSFAGVMGEWKTSIGDTVEIGEELGTLVTSEPALAEQFDAAAKESVVG
                     AGVDRGRAATEASVKRPGSSAIAKAMADRPTPATAIEPALSATITRKLNRVVPANLQI
                     DARWDAIQQARQAVKKTDREQAPSPSVIIAWAVVRAMEKHPPFRRLILEDDRIVQNDD
                     FDLGVAVALEGDRLATAVITTANQKSWPKFVGAFNETVAATRGGRVDAMNAPVVITSL
                     GAFEVKAGAPIVVPPSVGTLF"
     gene            3087..4148
                     /gene="thrC"
                     /locus_tag="VIS53_01165"
     CDS             3087..4148
                     /gene="thrC"
                     /locus_tag="VIS53_01165"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY5766420.1"
                     /translation="MIERYREFLPVSPATPIISLGEGNTPLTYSPRLSERVGRGCEVF
                     VKNEGVNPTGSFKDRGMTVAVSKAMERGVTALICASTGNTSASAAAYAARAGISCVVI
                     LPAGKIATGKLLQAFAYGAKIVAVDGNFDEALRIVRELGETGEFTIVNSINPDRIAGQ
                     KTAAFEIVDELGDAPDFHLLPVGNAGNITAYWAGYREFFACDRSTKLPSMIGFQAIGA
                     APIFHDCIIDKPETIASAIRIGNPASWQQARAAIVESQGGIDLVSDEDILAAQSWLAQ
                     HEGIFVEPASAASIAGLFKCCDADDAAYSFQKIPETSRIVCTVTGHGLKDPDVIIGRM
                     NKLKPIAATVTDVRHAIEL"
     gene            4205..5455
                     /locus_tag="VIS53_01170"
     CDS             4205..5455
                     /locus_tag="VIS53_01170"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY5766421.1"
                     /translation="MRLVVQKYGGTSVGKPERIVHVAQRILETQREGCRVVAVVSAMA
                     GATNELLRLGHAVAPQPTKRELDILLSTGEQAAAALTAMAVNGLGGTAISLTGAQAGI
                     LTDSNHTRARIANISPKQIHELLDDDYIVIVAGFQGQTPEGETTTLGRGGSDLTAIAL
                     AGALNADTCQVFTDVDGVFTCDPRVVKDAEKLGEIAYDELLEMAGSGAKVMQSRAVEF
                     AKKFGVEFEVRSTFKEIGGTVTREETPSMEDILIRGISLDRHQAKLSIAGVRDKPGIA
                     ARIFSDIGAAHIIVDMIVQNASIDGTTDISFTIHEDELENARTILMPVLGELGGKRLN
                     TASGVAKLSVVGIGMRSHSGVAARMFECLGRAGINIQLVSTSEIKIAVIIDEKEAERA
                     ARLIHAEFGLGRLLPADTATQPLT"
     gene            complement(5461..5904)
                     /locus_tag="VIS53_01175"
     CDS             complement(5461..5904)
                     /locus_tag="VIS53_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766422.1"
                     /translation="MLVCVEPARAAQPETSGNIKEMMSADEFKAAGLNKLSPDELQRL
                     DAWLQGYRQVTEQAAEKKATARASRTKMDLIVSRVDGAFYGLTGRTIIRLEDGTVWKQ
                     ANADDRYRSRVTDHPAAAVIHGVFGYKMRLEGATQEFYVDPVRNP"
     gene            complement(6344..6850)
                     /locus_tag="VIS53_01180"
     CDS             complement(6344..6850)
                     /locus_tag="VIS53_01180"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5766423.1"
                     /translation="MTLAVLDTTRLLLRQLKETDVSAIYSLRSNEQVNQFIDRPTAKD
                     PEEAKAFIQKITENKSYYWGITLKENGNMIGTICFWNLSADRKSAELGYELHPDYQGK
                     GYMDEAIKEVIGFAFRSGFTSLEAHTHRDNLASTKLLLKHGFVHDEERKDPENPYQMI
                     FSLAKPAG"
BASE COUNT         1611 a         1938 c         1988 g         1658 t
ORIGIN      
        1 cgaacagcgt accgactgaa gggggcacaa caatcggcgc gccagctttt acttcaaacg
       61 cgccgagact cgtgatgacg accggtgcgt tcatggcgtc aacacgacca ccgcgtgttg
      121 cagcgactgt ctcgttgaaa gcaccgacga atttcggcca gctcttttga tttgcagttg
      181 taatcacggc cgttgcaagg cgatcgcctt ccagcgcgac tgcaacaccc agatcgaaat
      241 cgtcattctg cacaatccga tcgtcttcga gaatcaatcg gcgaaacggc ggatgttttt
      301 ccatcgcgcg cacgaccgcc catgcaatta tcacggaagg ggagggtgcc tgctcgcggt
      361 ctgttttttt caccgcctgg cgagcttgct ggatcgcgtc ccagcgagcg tcgatttgga
      421 gattggcagg aacaacacga ttcagtttgc gcgtaatagt cgccgaaagc gcaggctcga
      481 tcgctgtagc cggggtcggc ctgtccgcca tagccttggc gatggcggat gaccccggtc
      541 ttttcacgga ggcttcagtt gctgcacggc cgcggtcaac gcccgcgcct acaaccgatt
      601 cttttgctgc tgcatcaaac tgttccgcaa gcgccggctc gctcgtaaca agcgtgccca
      661 attcctcgcc gatctcaacg gtatcgccga tgctcgtttt ccattcaccc atcacgcctg
      721 cgaatgaaga ttgaatggga taaacggctt tgtcggtttc cacctcgcac aattcgtcat
      781 ccagctgaat ctgttctccg ggctttttga gaaacgaaac gattttcgca ttccgaattc
      841 cttcgcccat gatcgggacg gtgatgcttt ggacgtgttg ttcagtcgtt tgtgttgtag
      901 ccgttggcgg cctgtccgtt gtagccttgg ccaaggcgga tgacgccggc tgcgcaaatt
      961 ttgattcctg agccgaacgg gtgcggtcaa cgcccgcgcc tacagttgcg cgttcatgtc
     1021 tggttgagat cgagcgcctg attgccgtta cgatccgctc cacatcaggc aatgccgcgt
     1081 attcgtagat tggattgtaa ccgatcacta cgttcggttt gctgacgaga atgggtgggc
     1141 tgagtaattc attccaaagc tcagggttgc cagtaacatg agagataatc atctgaccca
     1201 cgctgcaatt ttccgtgtcc tcctgaacca caaccagccg ccgcgtcttg cgcacggatt
     1261 cttcaatcgc gaccgcgtcc caaggtacga ttgagcggag atcgatcagt tcgacgctaa
     1321 tctcattgcc gattttattg agggcttcga gtgatttctc gattgcattg ccccatgcca
     1381 ccaaggtgac atcagagcct tcgcgcacgt tacgcgcttt gcccaacgga acagcacgaa
     1441 ttggttcgtt gtattcgtgg tcagcccaaa gcagatgttt ggcaacgaga aaaattacgg
     1501 ggtcctctgc atgcatcgcg gtccagagca atccagcagc gtcggcaggc gtgcttggaa
     1561 ccacaacgtt taggccggga taatgtgcga gcgctgattc gtttgcctgg ctgtgccaca
     1621 aactgccacc aggcagatac gcgccatagg gcgcatagat caccgcagga cacttccaat
     1681 ttccaaatga tcgccagcga agtgtcgaga tgttggtcac aagctgattg aagccgggat
     1741 aaatgaaatc gatgaattgc agctcgaaca ccggccgctt tccgtacgcg gcgagcccgc
     1801 atgcgacacc gagaatcgtg gattcggcaa gcggtgaatt gaaaacttgc ttcgggaatt
     1861 cagtcgaaag cttctgcgtc aggcggaaca ccccgccctt tggatcttcg atgtcctcgc
     1921 cgaagaggat acgttgcgga tcttcctcca gaccagcatg cagagttctg tttaccgtat
     1981 ctccgatgcg gtatttgccg ggagtaagaa tttctttttc gatcttcggc ggcggttttg
     2041 taacattggc gagaagctcg ttaggcgaag gatcttcagc tttttccgcc tcggcatatt
     2101 cgcggcgaac gcgctcctta atttcgttgt ccaactccgc gtaatcttct ggtgtgatta
     2161 cgccttcttt aatgagtcga tccttccaga aggttagagg atcggccttc tccaggtccc
     2221 gcagttcctc ggcactgcgg tacagtttct gatcgtcgga actagtgtgg ctcgacaggc
     2281 gttccatctt gatccaaaaa aagaacggtc cgccgccagc gcgaattttt tcgaacgctt
     2341 cagccgtcgc atcgtaaatc tgctggacgt cgtgtccttc gatttggcgc cagttgtcct
     2401 gctcgagaat gtccaaggcg agcgggttcg ttttgcgcgt aggcatgctg atgccgtagg
     2461 cgttgtcctc caccaggaaa agcatgggaa gcttcttttc tttcgcgaag cagattgcct
     2521 cgaaaaaatc tccctggcgc gtcgcggcgt cacctattgt cgtgacaacg acatttttgt
     2581 ttccatcaag cttaatgccc caggcgatgc cgcacgcagg aagaagctgt gaaccagttg
     2641 gcgtgggcac actccaaatg tggaggtctg cgtcgctgta gtgcgagggc atttgccgcc
     2701 cgccgctgcc ggtgttgcgc tttgcaaaat attccaggcc cagttgacgg gtggtcatgc
     2761 cgcgcccaag aaccaggcca cgatcgcgat aatacgaaac gatataatcg tcccgctcca
     2821 tctggatcga gaccgccgcc agtccttcgt ggcccatccc ggagacgtga aaatgtcctt
     2881 tgccctgacg aatcaaattc tgctcgcgca aatccgcgtg ccggctctcc agaataatcc
     2941 ttaagagccg cagcttatcg tctttgctaa gggcaggcat acggttgatt ttacatgtcg
     3001 cttctcgatc gacaatcgcg cggacctgcc tcgcataaag aaagttgatg cattcgacaa
     3061 caacaaaatc acagcggagc aggggaatga tcgaacgtta ccgcgaattt ctcccggtct
     3121 cgcccgcgac gccgatcatt tcgctgggcg aagggaacac gccgctgact tattctccgc
     3181 gattgagcga acgcgtcggt cgcggctgcg aagttttcgt caagaacgaa ggagtcaatc
     3241 ccacgggctc gtttaaggat cgcgggatga cggtggctgt gtccaaggca atggaacgcg
     3301 gcgtgacagc gctaatctgt gcttcaaccg ggaacacttc agcttcagca gctgcgtacg
     3361 cggcgcgtgc agggatttca tgcgtcgtca ttctgcctgc aggaaaaatt gcgacgggga
     3421 aattgcttca ggcttttgcc tatggagcga aaatcgtcgc cgttgacggc aatttcgatg
     3481 aggcgctgcg aatcgtgcgc gaactgggcg agaccggcga attcacgatc gtgaattcca
     3541 ttaatccgga ccggatcgct ggacagaaga cggcggcatt tgaaattgtc gacgaactgg
     3601 gcgatgcgcc cgattttcat ttgctcccgg tgggcaacgc cggaaacatc acggcgtact
     3661 gggcgggcta tcgggaattt ttcgcgtgcg accgatcaac aaaattgccg tcgatgattg
     3721 gcttccaggc gatcggcgcg gcaccgattt ttcacgactg cataatcgac aagccggaaa
     3781 cgatcgcctc agcgattcga atcggaaatc cagcgagctg gcaacaggcg cgcgcagcaa
     3841 ttgtcgaatc gcaaggcggc atcgatttag tcagcgatga agacattctg gctgcacaga
     3901 gctggctggc acagcatgaa ggaatttttg tcgagccagc gagcgcggcg tcaattgccg
     3961 gccttttcaa gtgctgcgat gcagacgatg ccgcatactc gttccaaaaa attccggaaa
     4021 ccagccggat cgtttgtacc gtcactggac acggcttgaa agaccccgat gtgattatcg
     4081 ggcgaatgaa caaattgaag cctatcgccg cgacggtgac ggatgtgcga cacgcaattg
     4141 agctgtagcc aacttcgaaa agaatcgcgg ttcgtgctcc gttggggtta gtctccatct
     4201 caacatgcgc ctggtagttc aaaaatacgg cggcacttcc gttggaaagc cggaacgaat
     4261 tgtgcacgtg gcgcagcgaa tccttgagac acagcgcgag ggctgccggg tagtggcggt
     4321 agtctccgca atggctggag ccactaatga gttgctccgg ctgggacacg ccgtagcgcc
     4381 gcagccaacg aagcgcgaac tggacattct gctttcaacc ggcgaacaag ccgccgctgc
     4441 gttgacagcg atggcagtga acgggctggg cggaacggca atctcattga ccggcgcgca
     4501 agcaggaatt ttaaccgaca gcaatcacac gcgtgcccgc atcgcgaaca tcagtccaaa
     4561 gcaaattcat gagctgctcg acgacgatta catcgttatt gtggccggtt ttcagggcca
     4621 gacgccggaa ggggaaacaa ccacgcttgg ccgtggcggc tcggacctaa cagcgattgc
     4681 gctggctggt gcattgaatg ccgacacctg ccaggttttc accgacgtgg atggcgtttt
     4741 tacctgcgat ccacgagttg ttaaagatgc ggaaaaactc ggcgaaatcg cttatgacga
     4801 actgcttgag atggccggta gcggcgcaaa agtgatgcag tcccgcgccg tggagttcgc
     4861 caagaaattt ggcgtagaat tcgaggtacg atcgaccttt aaggaaatcg gcgggacggt
     4921 cacacgagaa gaaaccccca gtatggaaga catactgatt cgtgggatca gtctggaccg
     4981 gcatcaggcc aagctcagca tcgccggagt gcgtgataag cccggaattg ccgcccggat
     5041 attttctgac atcggcgccg cgcacatcat cgttgatatg attgtgcaga atgcgtcgat
     5101 tgacggaaca accgacattt cgtttaccat tcacgaagac gaactggaaa acgcccgcac
     5161 aatccttatg ccggtgttgg gcgagttggg aggaaaacgg ttaaacaccg cgagcggcgt
     5221 agccaagttg agcgtcgtcg gcatcggaat gcgatcccat tcgggcgtcg cggcgcgaat
     5281 gttcgaatgc ctgggccgcg ccgggatcaa tattcaactg gtctcaacgt cggagatcaa
     5341 aatcgccgtg attatcgacg aaaaagaagc ggagcgcgct gcgcgattga tccatgcgga
     5401 gtttggtttg ggacgattgc tgcctgcaga caccgcgacg cagccgttga cctgattcag
     5461 ttacggattg cgtaccggat cgacgtagaa ttcctgcgtc gcgccttcga gccgcatctt
     5521 atagccgaaa acaccgtgaa ttacggcagc tgcggggtga tccgtgactc gcgagcggta
     5581 acggtcatcc gcgttcgcct gtttccatac cgtgccgtct tccaaacgaa tgatggtcct
     5641 gccggtcaat ccataaaaag ctccgtcgac gcggctcaca attaagtcca tttttgtccg
     5701 cgaagcgcgg gccgtggctt tcttttcagc agcctgttca gtgacctgtc ggtaaccttg
     5761 cagccaggca tccagcctct ggagctcgtc cggagagagc ttattcaatc ctgcggcttt
     5821 gaattcgtcc gccgacatca tttccttgat gttgcccgac gtctcgggct gcgcagcacg
     5881 tgccggctcg acacagacca gcattacgca aaaggaaagt ccaacgcacc ttagtaaaga
     5941 accgaggcaa atcttcttca tgacagcgaa ataggaattc gagactcgcg gaggctagca
     6001 ccggtcacaa tagcgtcaag cgttcgggcg acgaaagggg cggtggttgg ggtgcccaca
     6061 aatcgttcgg tcgccaatgt acttcaacaa catcagacaa tatatgtcat ataaaatcgg
     6121 agggggttcg gtcagattgc cgagccgccg ctggcagctg cttccgagca agaaagcgcc
     6181 taataccgac atggatgagc aatggcagta tgtcggagcg tgtttttgct agtcttgaac
     6241 atgcgagcgc acgcgcggat atcggaccca acaccaatcg gagagagttg gagtcagttg
     6301 ccatgggtta cgattgcgct gctgggatgc tctgccgaat tgatcagccg gcaggtttgg
     6361 ccagcgagaa tatcatctga tagggattct cggggtcttt tctctcctca tcatgaacga
     6421 atccatgttt cagtaaaagt ttcgtcgaag caaggttatc cctatgtgta tgtgcttcaa
     6481 ggctggtaaa gccgctccgg aatgcaaaac cgatcacttc tttgatcgct tcatccatat
     6541 aacctttacc ctggtagtca ggatgcagtt catagccaag ctcagcgctt ttcctgtctg
     6601 ccgataaatt ccagaaacag atagtcccga tcatgttacc gttttctttc aaagtaatgc
     6661 cccagtaata cgatttattt tctgtgatct tttgtataaa ggcttttgct tcttccggat
     6721 cctttgcagt agggcggtcg atgaattgat tcacctgctc gttggagcgt aaagaataga
     6781 tggcactgac atctgtttct ttcagttggc ggaggagaag cctcgttgta tcaaggacgg
     6841 caagggtcat gtttggccgg gaatttattt ctattatttt gagaaaccta tcttcaatcc
     6901 agcctgcact gcgagacgtc aatcgcaatt ccgggcgaaa ccccctaccc taaaatttct
     6961 gtaaaaaact atatgtcata tggagtcaaa tccggtggtt acacctactg gccaccttac
     7021 gcagatcaac ggttggctgc attgctgcct ggttaggccc gaacagactc ataaaccggc
     7081 aaagaacgct gcgatatcgc gggcgagcag ctcgggctcc tcggctgccg cgaagtgacc
     7141 acctctcggc atcggcgccc accggcgaac gttatataga cgttcggccc attcg
//
LOCUS       DATDAJ010000052         3200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_276764, whole genome shotgun sequence.
ACCESSION   DATDAJ010000052 DATDAJ010000000
VERSION     DATDAJ010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276764"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /gene="hemB"
                     /locus_tag="VIS53_01185"
     CDS             <1..579
                     /gene="hemB"
                     /locus_tag="VIS53_01185"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY5766424.1"
                     /translation="GDHFHVLNDESVELLVKTALSHAVAGADVVAPSDMMDGRIGAIR
                     EALDASGFDQTGIMSYAAKFASVFYGPFRDAAESPPQFGDRRSYQMDFANANEALREA
                     TLDVEEGADIVLVKPALPYLDILWRVRERFGKPTAVYHVSGEYAMVKAAVEKGIFDER
                     AAVLEIMTALKRAGADIIVTYWARELATWLRE"
     gene            564..1313
                     /locus_tag="VIS53_01190"
     CDS             564..1313
                     /locus_tag="VIS53_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766425.1"
                     /translation="MAAGITGRHGETTQHARLKQLAFIWAQTHGFSACAMEVTLPRCR
                     YRADVAGYRSVPKQTGSTVVFECKQALCDLKRDNCHSESARKRLEEICNRRQVLEARL
                     RTHYPNLHNGDSLFPEFDSENFSAIGHRGYARLVRELRALQNRLYDCTKFEKLIRYRC
                     ANLFFIVLPEQLFRESELPVGWGALVESKDMLILVRKPIWHESTTANRLHVLHRIAVA
                     GTRTLNRELSLDWHEQIVSGHFFRLRQAEQK"
     gene            complement(1248..2780)
                     /gene="gpmI"
                     /locus_tag="VIS53_01195"
     CDS             complement(1248..2780)
                     /gene="gpmI"
                     /locus_tag="VIS53_01195"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002139169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEY5766426.1"
                     /translation="MAGPVMLIIRDGWGINPGGSEKRKENGNATLLASTPFHELLYRD
                     YPWSRVSASGMDVGLPEGQMGNSEVGHLNLGAGRIVYQDLTRINKAIADGELEHNHVL
                     KEALVGARGHRLHLLGLVSDGGVHSHYSHMIALANAAHAAGVTEIFVHAFTDGRDTSP
                     TGGAGFLRTCEKELKNSGAKIITVVGRYYAMDRDRRWDRTKKAWDAIVLGRGESCESS
                     PAAAVERQYSLGKTDEFMPPLVFAFPNEQRIRDGDTVLFFNFRADRARQLSQAFLFKD
                     FDGFDREVWPQVHFVSLTQYDVRYSSPFIFAPEELKHILGEIVSAAGKRQLRIAETEK
                     YAHVTYFFNGGIEPPFPGEDRNLIPSPKVATYDLKPEMSASEVTDELLAHLADYDLII
                     LNFANPDMVGHTGVVEAGIKAVETVDACCARIIPKLLELDGKALVTADHGNCEQMRNP
                     DGSPHTAHTSYLVHFIYVANDATKFRCQDGILADIAPTLLFLLGLPQPKEMTGHNLLV
                     PV"
     gene            2903..>3200
                     /locus_tag="VIS53_01200"
     CDS             2903..>3200
                     /locus_tag="VIS53_01200"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY5766427.1"
                     /translation="MKWRNQLLAFVCVLAFAGVGVIYFQHWVIRKPFGIILFVGEGLS
                     PARLAPTRTYAAGAGTRLNMDSMPYAALIMNYSKDFAAPDQAAAATAIATGERVT"
BASE COUNT          705 a          900 c          916 g          679 t
ORIGIN      
        1 ggcgaccatt ttcatgtttt gaacgacgaa agcgtcgaac tgttggtgaa aacagcgctc
       61 tctcacgccg tcgcaggcgc ggacgttgtg gcgccgagcg acatgatgga tggccggatc
      121 ggcgcgattc gcgaggcgct cgatgcgagc ggattcgatc aaacaggcat catgagttac
      181 gccgcgaaat ttgcgtcggt gttttacggg ccgtttcgcg acgcagcgga aagcccgccg
      241 cagttcggcg accggcgttc gtaccaaatg gattttgcaa acgcaaacga agcgctgcgc
      301 gaggcgacgc tggatgttga ggaaggagcg gacattgtgc tggtcaaacc agccctgccg
      361 tatctcgaca tcttgtggcg tgtacgggaa cgcttcggaa aaccaaccgc cgtttatcat
      421 gtcagcggcg agtacgccat ggtgaaagct gcggtcgaga aagggatttt cgatgagcgc
      481 gccgccgttc tcgagatcat gacggcgctt aagcgcgccg gcgcagacat catcgtcact
      541 tactgggcac gcgaactcgc gacatggctg cgggaataac aggccgacac ggcgaaacaa
      601 cacaacacgc ccggctcaag cagctcgcat ttatttgggc gcaaacgcac ggattttccg
      661 catgcgcgat ggaagtgact ttgccccgat gccgatatcg cgccgacgtg gccggttatc
      721 ggtcggtccc gaagcaaaca gggtcgacag tggttttcga atgcaaacag gcgctgtgcg
      781 atttgaaacg agacaactgt cacagcgagt ccgcccgcaa gcgcctcgaa gaaatttgta
      841 atcgtcgcca ggttctggaa gcgcgcctcc gcacgcatta tccaaacctt cacaatggtg
      901 attcactttt cccggagttt gattccgaga acttcagcgc gatcggccac cgcggttacg
      961 cgcgcctcgt tcgtgaattg cgggcgctac aaaatcggct ctacgattgc acaaagttcg
     1021 agaagctaat tcgctaccgc tgcgcgaact tgttttttat cgtgctgccc gagcaattat
     1081 tccgcgaatc ggaactgcct gtaggctggg gcgctctggt cgaatcaaag gacatgctga
     1141 tactcgtccg aaaaccaatt tggcacgagt ccacaacggc caatcgcctt cacgttttgc
     1201 accgaatcgc cgtggcggga acacggacct taaatcgaga actctcgcta gactggcacg
     1261 agcaaattgt gtccggtcat ttctttcggc tgcggcaagc cgagcagaaa taaaagagtc
     1321 ggcgcaatat ccgccagaat gccgtcctgg cagcggaact tcgtggcgtc gttggcaaca
     1381 taaatgaagt gcacaaggta gctggtatgc gcggtgtgcg gcgagccgtc ggggttgcgc
     1441 atttgctcac agttgccgtg gtccgcagta accaacgctt tcccgtccag ctctagaagt
     1501 tttggaataa tgcgggcgca gcatgcgtcc accgtctcca ccgctttgat accggcctcg
     1561 accaccccgg tgtgaccgac catgtcggga ttggcgaagt ttagaatgat caaatcgtag
     1621 tcggctaaat gcgcgagtag ttcgtcggtg acttcggacg cgctcatctc cggcttcaaa
     1681 tcgtaagtgg cgactttggg cgaaggaatg aggttgcggt cttcaccagg aaaggggggt
     1741 tcgattccgc cgttaaaaaa gtaagtgacg tgcgcgtact tctccgtttc ggcgatgcgc
     1801 aattgacgtt tgccggcggc gctaacgatc tcccctaaaa tgtgtttgag ttcttcgggc
     1861 gcaaagatga acggcgaaga ataccggaca tcatactgag tgagcgaaac gaaatgaact
     1921 tgtggccaca cttcgcgatc gaatccgtcg aagtctttaa acagaaacgc ttgtgagagc
     1981 tggcgcgcac ggtcggcgcg aaagttaaaa aacaacaccg tgtcgccatc gcggatacgc
     2041 tgttcgttcg ggaaggcgaa gacgagggga ggcatgaatt cgtcggtttt gccaagcgag
     2101 tactgccgct ccacagcggc agcgggtgat gattcgcaag attcaccgcg accaaggacg
     2161 attgcgtccc atgctttttt cgtgcggtcc cagcggcggt cgcgatccat cgcgtaatag
     2221 cgccccacta cagtgatgat cttagcgccg ctgttcttaa gttccttttc gcaggttctt
     2281 agaaaacccg ccccgccagt gggcgaggtg tcgcgtccat cggtgaacgc atgcacaaaa
     2341 atttctgtaa ctcctgctgc atgcgcggcg ttcgccagcg cgatcatgtg cgagtaatgg
     2401 ctgtgcacgc caccgtcgga caccagcccg agaagatgca atcgatgtcc gcgcgcaccg
     2461 acaagggcct ccttcaaaac atgattgtgt tccagttcgc catcggcgat cgccttgtta
     2521 atccgggtga ggtcctgata aacaatcctg ccagctccga gattaaggtg gccaacctcc
     2581 gagttcccca tctgtccctc tggtaaccca acgtccatcc cgctggcgct cacacgcgac
     2641 cagggataat cacgatacag aagctcatga aacggcgtgg acgcgagcag cgtcgcgttg
     2701 ccattctctt tacgcttctc ggagcccccg ggattgatgc cccacccgtc gcgaatgatg
     2761 agcatcaccg ggccagccat gttcccgcac tttgccgatg aaccggaacg tcgacaagca
     2821 gttctttgaa agaaggtagc gcatgctccg gcttgccatt ttcgccgcgc aagcaaggac
     2881 gcttacgcta cactaagcga aaatgaagtg gcgcaaccag ttgctggcgt tcgtttgtgt
     2941 cctcgccttc gcaggagtgg gcgtcattta ttttcaacat tgggtcatcc gaaagccctt
     3001 cggcattatc ttattcgtcg gagagggcct gtcgcctgca aggctggcgc ctacgcgcac
     3061 ctatgctgcc ggagcgggca cgcgtttgaa tatggactcc atgccgtacg ccgcgctaat
     3121 catgaattac tccaaggatt tcgccgcacc cgatcaggcg gctgccgcaa ccgcgatcgc
     3181 cacgggagag cgtgtaacca
//
LOCUS       DATDAJ010000053         5101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_278368, whole genome shotgun sequence.
ACCESSION   DATDAJ010000053 DATDAJ010000000
VERSION     DATDAJ010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5101
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278368"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VIS53_01205"
     CDS             complement(<1..200)
                     /locus_tag="VIS53_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766428.1"
                     /translation="MNWDAISAISQLVGSLAVVLSVLYLAVQVHQSTRVAKVAMQDAA
                     AAALRDVTKPLMENAELERIWRV"
     gene            complement(327..854)
                     /locus_tag="VIS53_01210"
     CDS             complement(327..854)
                     /locus_tag="VIS53_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766429.1"
                     /translation="MVLVLIAVIVIAGLILIVPFILRGDHAQPGVAFWIGLSLFIFVA
                     VCLAFVWALVSQLMVPIMYRQRCRARLAFVQAVDLVSSHPGPILLYVLFLLLLAVAAV
                     MISCVVTCATCCIAVIPYVGTVILLPIPVTLGAFSLLFLRQFGSDYDVWAGFMPPEFL
                     PMLMPPPAPSGAATG"
     gene            complement(900..1277)
                     /locus_tag="VIS53_01215"
     CDS             complement(900..1277)
                     /locus_tag="VIS53_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766430.1"
                     /translation="MNENGSKIEIFKPFGEAFELMKKILFQPFELKKWLVIGFAAWLA
                     NLGAGGGGIGDFNYPDNRREGAQKFNETIGQIPQPVLITGICVLICVVLLLIVLFAWL
                     RARGRFILVDCVVRNRAAIAEPW"
     gene            1501..3372
                     /gene="treZ"
                     /locus_tag="VIS53_01220"
     CDS             1501..3372
                     /gene="treZ"
                     /locus_tag="VIS53_01220"
                     /inference="COORDINATES: protein motif:HMM:TIGR02402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HEY5766431.1"
                     /translation="MSSLKRRYLIGAELIGENLAHFRVWAPKVQEVDIVFEDAAKRKF
                     FPLTAEPDGYFSGIANAGSGARYRFRVNGEQNFYPDPASRYQPDGPHGSSCIVDPTKF
                     RWNDADWPGLKLKGQVFYEMHIGTFTTEGTWRAAAEQLSELARIGITVIEMMPVAEFP
                     GRFGWGYDGVDLFAPSHLYGTPEDLRGFIDHAHSLGLGVILDVVYNHFGPDGNYLGIF
                     SDDYLIRGKGHEWGDVINFDGANSGPVREFFITNGRYWIEEFHFDGFRFDATHAIRDQ
                     SNEYIIGAVGLAAREAAGSRSIVLIAENDLQEARMTRTQNKGGNGLDGMWNDDFHHSA
                     IVALTGQNVGYFSDYSGKPQEFISAAKYGFLYQGQALSWRKVLRGTPTFGVPSEAFIC
                     FIENHDQIANTGPGERPRFQISAGRHRAMTALLLLGPWTPLLFQGQEFGASSPFLFFA
                     DVGDAAVRDEIRKGRAELLAPFLSLTEEETLRSLPAPDDPKAFSRCKLDFSEREKNRE
                     LYNLHIDLLKLRRDDSRFRLQESDGIDGAVLSPMSFVLRYFSEANDDRLLLVNLGQRQ
                     ILNAASEPLLAPPAGCRWETLWTSDSRRYGGAEAVAIATPKQWILPAETAVVLRSLL"
     gene            3498..4907
                     /locus_tag="VIS53_01225"
     CDS             3498..4907
                     /locus_tag="VIS53_01225"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5766432.1"
                     /translation="MKTRTHFLLIALTFTFLTIIEPNAPAVLPPPDGGYPNFTTAEGT
                     KALLHLTSGAANTGLGWSSLLNVTTGSFNTGVGAGTLALNTGDSNTATGAAALLLNTV
                     GTENTANGTATLVSNSTGSANSAFGAFALNNNGGGSSNTAMGDRALLLNTTGGFNTAT
                     GSLALQANTVGSDNTAVGAGALESNTGSENTAIGSGVLLFNTTGTGSTATGFQALLNS
                     TVANGNTAYGYQALSNNAGSAATASFNTAIGYRALTNQTSGVGNIALGPAAGDQITTG
                     DDNIDIGNGGQFSDSRTTRIGQDQLATYIAAISGVNEGGSGILPVYINNLGRLGTQPP
                     ASSRRFKHDIRPMANASEGILGLKPVAFHYKDDATKTPQFGLIAEDVAEMNPDLVMRD
                     ENGEIYTVRYEAVNAMLLNEFLKEHRTVQQQGATIAELKKEIANLTGIVGKQATQLQN
                     VSAQVGTIRSVPQLVVSDR"
BASE COUNT         1238 a         1405 c         1361 g         1097 t
ORIGIN      
        1 acgcgccaga ttcgttccag ctcggcgttt tccatcaacg gcttggtcac atcgcgcagg
       61 gccgctgccg cggcgtcctg catggcgact ttggccacac gcgtgctctg atgcacttgc
      121 acggccagat atagcacgga caaaacgaca gctagcgagc cgaccaattg cgagatggcg
      181 ctaatcgcat cccagttcat cgtccagatt gtaccacgta atcgccgttc gcttgaatgt
      241 cattctgcgc gcagcgaaga ttctctgatc atttttcagc gctgcatcac ctgcgatgtg
      301 catatctccc gcgtttggtc cgttagttag cctgttgcag ctcccgaagg tgcaggcggc
      361 ggcatcaaca tgggcaaaaa ttccggcggc atgaagccgg cccaaacatc gtaatcggaa
      421 ccgaattgcc gaaggaacaa cagtgagaaa gcaccaagtg taactggaat tggcaaaagt
      481 ataactgtgc cgacgtatgg aatcacagcg atgcaacaag tcgcgcatgt taccacgcaa
      541 ctaatcataa ccgccgcaac tgctaacagc agaaggaata acacgtacag gaggatcggc
      601 ccgggatgcg agcttaccag gtccacggct tgcacaaacg cgagccgcgc gcgacaacgt
      661 tgccgataca tgatcgggac catcaattga gagaccagcg cccagacgaa agcaaggcag
      721 actgcgacaa atatgaacag tgaaaggcca atccaaaacg cgacaccagg ttgggcgtga
      781 tccccccgga ggataaacgg cacaatgagt atgagacctg caatcacgat cacagcgatg
      841 agcacgagca ccacgagcag tgagaacagg aagaagctgt ttccctctgc ccgaaatact
      901 taccacggct cggcaatcgc agcgcgattg cgaacgacac agtcaacaag aatgaatcgt
      961 ccgcgcgcgc gtagccacgc aaacaggacg atgagcagaa ggacgacgca aatcagaacg
     1021 caaatacctg taataaggac cggctgtgga atctggccga tcgtttcgtt gaacttctgc
     1081 gcgccttccc gtcggttgtc cggatagttg aaatcgccga ttccgccacc acccgcgcca
     1141 agatttgcaa gccaggcagc gaagccgatt acaagccatt ttttcaattc gaacggctga
     1201 aagagaatct tcttcatcaa ctcgaacgct tcgccgaacg gcttgaagat ctcgattttt
     1261 gatccgtttt cgttcatatc cggtttggtg ataaccggcg gcgattgtag ggcaaccgca
     1321 tcggttgcca agcccaacgg agagcaaccg aaggggttgc gatcaatttc gctgagggcg
     1381 cgttgtagtg tccgctgtcc tcagcggatg gggagcatgt cgcagcagat gcgctgagga
     1441 cagcgcacgc cacagcacgc gcggttgttt agtgaacgat gcgcacgatc ttaattattg
     1501 atgtcgagtt taaaacgccg ctatctgatc ggtgccgaat tgatcggtga aaacctcgcg
     1561 cattttcgcg tttgggcgcc gaaggtccag gaagttgata ttgtcttcga agacgccgcg
     1621 aaacgaaaat tctttccact aacagccgag ccagacgggt atttctcagg catagctaac
     1681 gcaggctccg gcgctcgcta ccgctttcgc gtgaatggag agcagaattt ttatcccgat
     1741 ccggcatcgc gttatcaacc cgatggaccg cacggatctt cgtgcattgt cgatccgaca
     1801 aagttccgat ggaacgacgc ggactggcca ggattgaaac taaaaggcca agtcttttac
     1861 gagatgcaca tcggcacgtt caccacggaa ggaacgtggc gcgctgctgc cgaacagtta
     1921 tctgagctgg cgcgcatcgg aatcaccgtg atcgaaatga tgccggtcgc ggagtttcct
     1981 ggcagatttg gatggggcta tgacggcgtc gatctcttcg cgccttcaca tttgtatgga
     2041 acaccggaag atttacgcgg attcatcgac catgcgcact cgttaggcct cggggtaatt
     2101 ttggatgtcg tttataacca cttcggaccc gacggaaatt atctgggcat tttttccgac
     2161 gattacctaa tccgcggtaa aggacacgaa tggggcgacg tgatcaattt cgacggtgca
     2221 aattcaggac cagttcgcga atttttcatc acgaacggcc gttattggat cgaagaattt
     2281 catttcgacg gcttccgttt cgacgcaaca cacgccattc gcgatcaatc caacgaatac
     2341 atcattggcg cagtcggtct cgccgcgcgc gaagcggcgg gttcgcgttc gatcgtgctt
     2401 atcgccgaga acgatctgca ggaagccagg atgacacgaa cgcaaaataa aggcggcaac
     2461 ggtttggatg gcatgtggaa tgacgatttt catcacagcg ccattgtggc gttgaccggt
     2521 caaaacgtcg gatatttcag cgattactcg ggtaaaccgc aggaatttat ttccgcggcg
     2581 aaatacggtt ttctttatca ggggcaggcg ctttcgtggc gaaaagtgtt gcgcggcact
     2641 ccgaccttcg gcgttccctc ggaggcgttc atttgtttca tcgaaaacca tgaccagatc
     2701 gcgaacaccg gtccgggtga acggccgcgc tttcaaattt ccgccggacg ccaccgcgca
     2761 atgactgcgc ttcttttgct cggaccatgg acgccactgc tatttcaggg ccaggaattc
     2821 ggcgcatcca gtccttttct attttttgcg gacgttggcg atgcagccgt gcgcgatgag
     2881 attcgcaaag gtcgcgctga attgctggct ccatttttat cgctaactga ggaggagacg
     2941 ttgaggagtc tacccgcgcc agatgatccc aaggcgtttt cacggtgcaa actcgatttt
     3001 tcagagcgcg aaaaaaatcg cgagctttac aatttgcaca tcgatctcct caaattgcgt
     3061 cgcgacgatt cgcgatttcg gctgcaagaa tcagacggta tcgatggcgc ggtgctgagt
     3121 ccgatgagtt ttgtcctccg atatttttcg gaagccaacg acgatcgtct attgctggtg
     3181 aatcttggac aacgccaaat tttgaatgct gcttcggagc ctttactcgc gccgccggcc
     3241 ggttgtagat gggagacact ttggaccagc gattcgcggc gctatggagg agcggaagcc
     3301 gttgcaatcg caactccgaa gcaatggatc ttgccagccg aaaccgccgt cgttctgcgg
     3361 tccctgctgt agcgtccgca attcctaacc ctccgagttt tcgcccactc gttttgtacg
     3421 cctggagcaa tggatcttaa accagctagt cggttttaat ctcgacaatc cagcaccctt
     3481 tttgcaacgc tgtcgctatg aagacacgaa ctcacttcct tcttattgca ctaacgttta
     3541 cttttctgac gataatcgag ccaaatgcgc cagccgtgtt gccaccacca gatggcggct
     3601 atcccaattt caccacggcg gaagggacga aggcgctttt acacctcacc agcggagctg
     3661 ccaatacagg gctgggttgg tcctcgctct tgaatgtcac caccggcagc tttaacaccg
     3721 gtgttggtgc tggaacgctt gctctcaaca ccggggattc aaatacggct actggcgccg
     3781 cagcgctttt gctgaacacc gtcggtacag aaaacactgc caacggaaca gccacgcttg
     3841 tctcgaactc gaccggcagc gccaacagtg ctttcggtgc gtttgctctg aataacaatg
     3901 gtggtggcag ctccaacacg gccatggggg atagggcgct cctcctcaac accaccggcg
     3961 gcttcaacac ggccacaggc tctcttgcgc tccaagctaa cactgttggc agcgacaaca
     4021 ccgccgttgg tgcgggggcg cttgagtcca acactggcag cgaaaacaca gccatcggtt
     4081 ccggagtgct ccttttcaac acgaccggca ccggcagtac ggcgactggc tttcaagcgc
     4141 tattgaacag tacagtggcc aatggcaaca cagcttatgg ttaccaggcg ctctcgaata
     4201 acgcaggatc ggctgccact gcgtccttca atacagccat tggctatcgt gcccttacca
     4261 accaaacaag cggcgtcggc aacatagcac ttggtcccgc cgcgggtgat caaatcacta
     4321 ccggggatga caacatcgat atcggtaatg gcggtcaatt tagtgattcc agaaccaccc
     4381 gcatcgggca agaccaactc gcgacctata tcgccgccat ctcgggagta aacgagggcg
     4441 gctccgggat tctaccagtt tacatcaata acttggggcg tctcggcacg cagccgccag
     4501 cttcctcacg ccgattcaag cacgacatta gacccatggc caacgcgagc gaaggcatac
     4561 tcgggctcaa gcccgtcgcg tttcattaca aagatgacgc gacaaaaaca ccacagtttg
     4621 gattgattgc cgaggacgta gctgaaatga acccggatct ggtcatgcgc gacgaaaacg
     4681 gcgaaatcta cactgtgcgc tacgaggcgg tgaacgcgat gcttctgaac gagtttctga
     4741 aagagcatcg gacagtgcag cagcaaggag ctacgatcgc agagctcaaa aaggaaatcg
     4801 caaatcttac tggaatagtg ggcaagcagg cgacgcaact ccagaatgtg agcgcccaag
     4861 ttggaacgat caggtccgtt ccccaattag tcgtcagcga tcgctagttg atttctaggg
     4921 cgtccgtgtc aggacgccaa taatcggaaa taaacaagga gaaaacaaat gaaaattata
     4981 acgaaaattg ttcacatcgc gtttactgta cttgccattg cctattttgc gctttgctca
     5041 caggtgcgag ccgtggtccc gccgccggac ggcggctacc ctgggttcac caccgcagaa
     5101 g
//
LOCUS       DATDAJ010000054         3334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_282815, whole genome shotgun sequence.
ACCESSION   DATDAJ010000054 DATDAJ010000000
VERSION     DATDAJ010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282815"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..957)
                     /locus_tag="VIS53_01230"
     CDS             complement(<1..957)
                     /locus_tag="VIS53_01230"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766433.1"
                     /translation="MTRFAYLFERFPSFGQTFCYREVTELDRQNIAPPIFSIRNPKDE
                     PTQDWDTRIVERVHYLPEEKELLEDVRRAAKKGNLSIDIVAALDEWGRRTDFLRLYQA
                     VYVGLRLRKMGIDHVHAHFAGMAARTAFWISKFFPITFSFSAHANDIFSPREFEIGLD
                     KLVDTARAIVTETDYAARFLRERFSHRADRVHRIYNGLDLAEFGRADFSSTPPLIIAV
                     GRLIPKKGFGVLIRTCALLMEREKSFRCEIIGSGPRENELHRQIDGLCLQNNVVLTGA
                     KPQTQLRGRLAAASVFVLPSVIDPDGGMDNLPTVIMEAMATGL"
     gene            complement(982..1368)
                     /locus_tag="VIS53_01235"
     CDS             complement(982..1368)
                     /locus_tag="VIS53_01235"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEY5766434.1"
                     /translation="MSDKPKGELVIQTIAMPQDTNPNGDIFGGWVTSQMDLGSGILAA
                     KTAQARVVTAAMEGMSFLQPVKVGDTVRCYAHVEKIGRTSMTIPVEVWVTRFMTGEEL
                     RVTHGVFTLVAVDDSGKPIPVKRGSA"
     gene            complement(1548..2540)
                     /gene="queA"
                     /locus_tag="VIS53_01240"
     CDS             complement(1548..2540)
                     /gene="queA"
                     /locus_tag="VIS53_01240"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEY5766435.1"
                     /translation="MSARLSDYDYVLPRELIAQRPLERRQDSRMMVLHRAEQRIEHRQ
                     FRELNTFLQPGDLIVLNDTRVLAARRFSDDDAVEFLFLERLGPTRWKCMVTPGRKMRV
                     GATATIDDVCLRVEKITANGERIVAFDQDVDVYAGGSMPLPPYVNRPSDESDAARYQT
                     IFAREPGAVAAPTAGLHFTSEILSEIPHTFVTLHVGPGTFLPVRSENIAEHGMHAERF
                     SISPEAADKINHAQRIVAVGTTTMRVLETATCKTKLFSRQIEPQSGETDLFIYPPFRF
                     RVVDALLTNFHLPRSTLLMLVSAFAGREFILRAYEEGVRDRYRFYSYGDCMLIL"
     gene            complement(2610..>3334)
                     /locus_tag="VIS53_01245"
     CDS             complement(2610..>3334)
                     /locus_tag="VIS53_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY5766436.1"
                     /translation="RRELESPRWQPQTLVLSGVTDPYQPVERKLQITRGCLDVLAKFR
                     NPVAMITKNHLVTRDIDILHELAACNAAAVNVSVTSLDPTLQRVLEPRTTSPQGRLDA
                     IEQLRAAKIPVGVMVAPIIPGLTDHEVPNILDACAKAGAQFAGYTIIRLPWAVAPLFE
                     HWLEEHFPDRKEKVLRRIRHLRGNRLNNTQWRTRMTGEGIFAEQIASLFKVGCRRAGI
                     GERPALSCKSFRRSTTQLRLFA"
BASE COUNT          750 a          970 c          890 g          724 t
ORIGIN      
        1 cagccccgtc gccatcgctt ccatgatgac tgtaggcaga ttgtccatgc cgccgtcggg
       61 atcaatcacg ctcgggagca caaaaacact ggccgcggcg agccgaccgc ggagttgagt
      121 ctgcggcttt gcgcccgtca gcacgacatt gttttgcaag cacagtccat cgatttgccg
      181 gtgtagctcg ttctcacgcg gccccgaacc gatgatttca cagcggaacg atttctcacg
      241 ttccatgagc aacgcgcagg tgcgaatcaa aacgccgaac cccttttttg gaatcaaacg
      301 accgactgcg atgatcagag gtggagtcga agaaaaatcg gcccgcccaa attccgcgag
      361 atcgagtccg ttgtaaatgc ggtggacgcg atcagcgcga tgagagaatc gctcgcgtaa
      421 aaagcgcgcg gcgtaatccg tttcggtcac gattgcgcgc gctgtatcca caagtttatc
      481 cagtccgatt tcaaactccc gcggagagaa aatgtcgttc gcgtgcgcac taaaactgaa
      541 agtgatcgga aaaaatttgc taatccagaa agcagtgcgc gcagccatgc cggcgaaatg
      601 cgcgtgcaca tgatcgatcc ccattttccg caagcgcagt ccaacataga ccgcctggta
      661 aagccgaagg aaatcggtgc gacgccccca ttcatccagg gcggcgacaa tgtctatgct
      721 gagattccct ttttttgcgg cgcgtcgaac gtcttccagc agttcctttt cctctggaag
      781 atagtgcacc cgttcgacga tacgcgtgtc ccaatcttgt gttggctcgt ctttcgggtt
      841 ccggattgaa aagattggcg gcgcgatgtt ttggcgatca agctccgtca cttctcgata
      901 gcaaaatgtt tgtccgaacg atgggaaccg ctcgaagagg taagcgaaac gcgtcatcga
      961 gattcaggaa tgcagtagcg atcacgcgct gccgcgcttg acaggaattg gttttcccga
     1021 gtcatcgacc gcgaccaacg taaagacgcc atgtgtgaca cgtagttctt cgcccgtcat
     1081 gaaacgcgtg acccaaacct cgacggggat cgtcatcgaa gttcgcccga ttttctccac
     1141 gtgcgcataa cacctgacag tatcccccac ttttaccggt tgtaggaacg acattccttc
     1201 cattgccgct gtgaccacgc gcgcctgcgc agtcttcgcc gctagaattc cactaccgag
     1261 gtccatctgc gaggtgaccc atccgccgaa aatgtcgcca ttcggatttg tgtcctgagg
     1321 catggcgatg gtttgaatca ccagctcgcc ttttggttta tcggacataa caccaatcta
     1381 gcccgtcatt ccgagcgaag tcgaggaatc ccgctgagca gcgtgtggtt ttaccacgag
     1441 atccttcgac tctcctgcgc ttcgctcagg atgacgccgc aatcttcgtc ttcctctgct
     1501 tctgcttgct tcgctctcga agattcagag gaagcggaag aggaagttta aaggatcagc
     1561 atgcaatcgc cgtaactgta gaagcgatac cgatcacgga ccccttcctc gtacgcacga
     1621 agaatgaatt cgcgtccagc aaacgcgctc actagcatca gtaaagtcga acgcggtaag
     1681 tgaaaattgg tcaacagcgc gtcgacaact cgaaacctaa acggcggata aatgaaaaga
     1741 tcggtctcgc ctgattgcgg ttcaatctgt cggctaaaaa gtttggtttt acacgtcgct
     1801 gtttcgagaa cgcgcattgt tgtcgttccc acagctacaa tccgctgcgc gtggttgatc
     1861 ttgtctgcgg cttccggcga aatggagaaa cgctccgcat gcattccgtg ttcggcgatg
     1921 ttttcagagc gcacagggag aaatgttccc ggtccgacat gcaacgtcac gaacgtgtgc
     1981 ggaatttcac ttaagatctc ggacgtaaaa tgcagaccag ccgtaggcgc ggccacggcc
     2041 ccgggctcac gagcaaaaat cgtctggtaa cgcgccgcgt ccgattcatc gctcgggcga
     2101 ttgacatacg gcggtaacgg catcgaacca ccggcataaa catcgacatc ttgatcgaac
     2161 gcgacgatcc gctcgccatt tgcggtgatt ttttcgaccc tcaaacacac atcgtcgatc
     2221 gttgccgtcg cgccgacccg cattttacgg cccggcgtaa ccatgcactt ccaacgcgtt
     2281 ggcccgagac gctcgagaaa caaaaattcc accgcgtcgt catcggagaa tcgccgcgct
     2341 gccaacacgc gtgtatcgtt caacacgatg aggtcgcccg gctgcaaaaa cgtgtttagc
     2401 tcgcgaaatt gccgatgctc gatcctctgc tcggcgcgat gcaaaaccat catccgggaa
     2461 tcctggcggc gctcaagcgg gcgctgcgcg atcaattccc gcggcagaac gtaatcgtaa
     2521 tcgcttagcc gggcgctcat cggtcggttg aatctagcgc agatcgctgg gaaacatcgc
     2581 gctcgaatcg tgtgtcgctg ccgatgcgct tatgcaaaaa gacgcagctg cgttgtcgat
     2641 cgtcgaaatg atttgcagga aagagccggc cgctcgccga tgccggctcg acgacaaccg
     2701 accttgaata gcgacgcgat ctgctctgca aaaattcctt ctcccgtcat gcgcgtgcgc
     2761 cattgcgtat tgttgaggcg gtttccccgc aaatgccgaa tccgccgcag caccttctct
     2821 ttgcggtctg gaaaatgttc ctccaaccaa tgctcgaaca gtggcgcaac cgcccatggc
     2881 agccggataa tcgtgtagcc ggcaaactgc gcgcccgctt ttgcgcacgc atccaggata
     2941 ttcggaacct cgtgatcagt gagtccagga ataattggcg cgaccattac tccaactgga
     3001 atttttgctg cacgaagttg ttcgatagcg tcgagccgac cttgcggcga ggtcgtgcgc
     3061 ggttcgagca cgcgctgcaa ggtcggatcg agagacgtca ctgaaacgtt gaccgccgcg
     3121 gcgttgcacg ccgcgagctc gtgcaaaata tcgatgtcgc gcgtgacgag atggttcttt
     3181 gtaatcatcg ccacaggatt gcgaaacttc gcgagcacat cgaggcagcc gcgcgtgatc
     3241 tgcaattttc gctccaccgg ttgatacgga tcagtcacac cgctcagcac aagcgtctgc
     3301 ggttgccatc gcggcgattc cagctcgcgg cgca
//
LOCUS       DATDAJ010000055         6900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_288694, whole genome shotgun sequence.
ACCESSION   DATDAJ010000055 DATDAJ010000000
VERSION     DATDAJ010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6900
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288694"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VIS53_01250"
     CDS             <1..524
                     /locus_tag="VIS53_01250"
                     /inference="COORDINATES: protein motif:HMM:NF014663.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="KipI antagonist"
                     /protein_id="HEY5766437.1"
                     /translation="SAFAKATADKSPLATAVSSWTASHDWTSPASGHPILRFVRGFDW
                     FRFNDVTIQRFTNQEFAVSPDSDRMGVRFDGPELKREDETDLISEAVAPGTIQVPPSG
                     KPILLLGDCQTIGGYPKIAHVITVDLGIAAQLRAGDRVRFSEVSLQDAHRLLMERERD
                     LERFRIGLSLQRS"
     gene            521..1276
                     /locus_tag="VIS53_01255"
     CDS             521..1276
                     /locus_tag="VIS53_01255"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF003814.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEY5766438.1"
                     /translation="MNLTVDLNADLGEGSGHDAELFELISSANIATGFHAGDSDTMHA
                     AISAAKKQRVAIGAHPSFFDRENFGRKELTIPAEEVFDAVAYQLGIFQAIASALDVQP
                     NHVKPHGALYNMAVCDANLADAIARAVESIDPKLILFAPDKSELARAGEAHGLQIARE
                     IFADRNYLNDGWLVPRTRPDALLHDPKEAAERVLRMLREGKVRSVDGRDVDVRGETVC
                     VHGDTPGAVEFARELRTWLEREGVKISPPRSRS"
     gene            1400..2914
                     /locus_tag="VIS53_01260"
     CDS             1400..2914
                     /locus_tag="VIS53_01260"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5766439.1"
                     /translation="MNEKIGNQRDTTGLVRALGPIDATMIVIGSMIGSGIFIVSAESS
                     RLSGAPGWLLLAWALAGLLTITGALCCSELATMMPRAGGVYVFLREAFGSPIGFLYGW
                     TLFLVVQTGTIAAVAIAFAKFLGVFATSVSPDNYLVPPISLGAYAISLSTEQLMAIAL
                     IALLTWTNTRGLEVGKIVQNTFTFAKTAALTAVVVIGLSLGWKANSAALTTAWWDSWA
                     NGWNPQAAQPGFAVIGSLALALLFGRSMVGPLFAQTAWTNVTFIGSEVRDPAKNLVRA
                     LVGGCAVVVVLYLLANVAYLAVLSLPEIQHAPHNRVAVAMMDALFGRPGALCMAAAIM
                     ISTFGCDNGLILAGARVYYAMARDGLFFRKIATTNRFHVPAAALVAQGIWTALLVLPR
                     TVTTNVATQQVTYGNVYNQLLEYIVSADLVFYLLMIVAVILLRRKKPNAERPYRTWGY
                     PIVPIISIMLSALLTIDLAWLAPATSGIGILIVLTGVPAYFLWRQRGARHASPV"
     gene            2939..3130
                     /locus_tag="VIS53_01265"
     CDS             2939..3130
                     /locus_tag="VIS53_01265"
                     /inference="COORDINATES: protein motif:HMM:NF022890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3008 family protein"
                     /protein_id="HEY5766440.1"
                     /translation="MPAKSKKQQMAAGAALAAKRGKRSKSSLKGASRQMASSMSTSEL
                     RKMAKTKRKGKLTRKRKKR"
     gene            complement(3239..4030)
                     /locus_tag="VIS53_01270"
     CDS             complement(3239..4030)
                     /locus_tag="VIS53_01270"
                     /inference="COORDINATES: protein motif:HMM:NF025389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4239 domain-containing protein"
                     /protein_id="HEY5766441.1"
                     /translation="MQFLLQLAPPISFFIVSAITTFLSLAGLYLVRRKYSAEVLKENH
                     EVAAIIFNAFGLFYGVLVAFVVFVTWSGYDEATKNLQMEASEALDIFHTAAAFPDSPK
                     KIIQQGVRDYLAVVYNDEVPKMSEGDLQLYSGGAHNSLRILFTQVDASSIPNRELYGE
                     SLRCLNNLAQYRRMRIFSGNNTVPPVIWLVLLVGGVFAVSYTFFFGMKNIRAQYLITT
                     TLTVTVTSILFLVYVLDHPFTGTSKVSFAPLREAMAAMQGDKVGE"
     gene            complement(4066..4677)
                     /locus_tag="VIS53_01275"
     CDS             complement(4066..4677)
                     /locus_tag="VIS53_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766442.1"
                     /translation="MICGRTSAMMMTLLISASGYAANPFLNTPDDTPLSAKFRGTEWS
                     EDIGEQDVPLTARVVTTRMAKMPWGAIFKLEFTDLKSSAQKQREIRPDYFIVTDNRIV
                     LLNEEDNDAAAKKISALDKPPDFQPNDIYGITNGTFEHQEGEWKTTIKLKGDLCIYEA
                     SHPSGHFKKIVWKKDVGLVEYASGYGAHADGYRLKREVTSQKR"
     gene            4766..5320
                     /locus_tag="VIS53_01280"
     CDS             4766..5320
                     /locus_tag="VIS53_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766443.1"
                     /translation="MGLLFVSTQPIHAQESPAFEKIRDVSPDGKFALRISCSSEPEDP
                     DNIDSSLITAADLVSLPSKKVVVNVMEEGTPPHLIWSPDSKWVAFPVSESHRVTDTRV
                     YHRSGEEFTQLETENLRVNAKGAVRNEYVNPVRWIKPGILLLEHSTSFAVGTAKTLLI
                     NSPRNLTRTRKFQIGSKKKVPSKE"
     gene            5328..>6900
                     /locus_tag="VIS53_01285"
     CDS             5328..>6900
                     /locus_tag="VIS53_01285"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766444.1"
                     /translation="MKNILASRTIFIIIAFLVCANAPSAFAKPQKKPAGSTQENPDRL
                     VNAAMKNMETGVWSVNGTVTARKPIKLQGLLAGEDFDLAMEPGMKPNTPMREIVIKDK
                     AWICSDGETWHAGRPDDRLIYNWAHVPIMADRKLPPFEKVGSEQRNGETWLHVRLKGP
                     EKKINPKELPQYWLVLDSQGQAQYVGHTEMPMFSQARNEVMYCSFDYAPAKEKIAPPP
                     LGAPVDDKAYGFNDIEQHKVDWKGRIVRLEVTPKILESKQIGEDTYRAFLKDTATPNH
                     YGIVEFPHDALVKLGFLKKIVSGAHATEELEKMGALGRTEGEPLSFYVQVIPIGEKPA
                     ARAVAVGARLVRDPDGSVSYTWEADDKQAAKSSPAAAAPDASDGDLVNRGIEKAKNDD
                     LDGAIADFNRAAELNPKDDAPYYNRAQARRLKNDTAGAIADYTKAIELGSTNPAAYNN
                     RGNARAENKDRDGAIADYTRAIELKPDYARAYYNRAMLKKEKADSAGAAADFKRAQKL
                     DPDLVSEGSAADSTSN"
BASE COUNT         1617 a         1830 c         1888 g         1565 t
ORIGIN      
        1 catccgcctt cgctaaagct acggcggaca agtcgccgct ggctacagct gtttcctcgt
       61 ggaccgcatc acacgattgg acaagcccgg caagcggcca cccgattttg cgtttcgttc
      121 gtggtttcga ttggtttcga tttaacgatg taacgattca acgattcacg aatcaagaat
      181 tcgccgtttc accagattca gaccgcatgg gcgtgcgctt cgatggtccg gaattgaaac
      241 gcgaggacga aaccgatctc atttcggaag cagtcgcgcc tggcacaatc caggttccac
      301 caagcggtaa accgattttg cttttgggag attgccaaac catcggcggg tacccaaaaa
      361 tagctcacgt gatcacggtc gatcttggca ttgcagcgca gcttcgtgcc ggtgatcgcg
      421 ttcgtttttc cgaagtgtcg ctacaagatg cgcatcggct gttaatggaa cgcgagcgtg
      481 acttggaacg tttccgcatc ggcctgagtc tgcaaagatc atgaatctca ctgtcgatct
      541 gaacgcggac ttgggcgaag gctcaggcca cgatgccgag ctgttcgagc tgatcagctc
      601 agcgaatatc gcgaccggtt ttcacgccgg cgattccgat acgatgcatg ccgccatttc
      661 cgcggcgaag aagcagcgag tagctatcgg agcgcatccg agttttttcg atcgcgagaa
      721 tttcggacgc aaggagctga cgatacctgc cgaagaagtg ttcgacgccg tggcttatca
      781 acttggaatt tttcaagcga tcgcctccgc actggatgtg caaccgaatc atgtgaaacc
      841 gcacggcgcg ctctataaca tggccgtgtg cgacgcgaat ctcgccgacg caatcgcgcg
      901 cgccgtcgaa tcgatcgatc cgaaattgat cctgttcgca ccggacaaga gcgagcttgc
      961 ccgtgcgggc gaggctcatg gtctgcaaat cgcgcgcgag attttcgccg atcgtaatta
     1021 cttaaatgac ggctggctcg ttccgcgcac gcgaccggat gcactgcttc atgatccaaa
     1081 ggaagcggcc gagcgtgtat tgcggatgct gcgcgaaggc aaggtgcgtt cagtcgacgg
     1141 ccgggatgtc gatgtgcgcg gtgaaacagt ctgtgttcac ggcgatacac ccggcgccgt
     1201 cgaatttgcg cgggaactgc gcacatggct tgaacgcgaa ggcgtgaaaa tcagcccgcc
     1261 gcgaagtcgc tcgtgaacct gctgtcattc cgagcgaagc gcagcgtagt cgaggaatcc
     1321 cccggcgata cgtgaagctt ttacgacggg atgtctcgac ttcgctcgac atgacagacg
     1381 taacacgccg cggccacgca tgaacgaaaa gatcggcaat caacgcgaca caaccggtct
     1441 tgtccgcgca cttggtccaa tcgacgcgac catgatcgtc atcggttcga tgatcgggtc
     1501 gggcatcttc atcgtgtcag cagaatcatc gcgattgagt ggcgcgcccg gttggctgtt
     1561 gctcgcatgg gcgctcgccg gcttactgac gattacaggc gcgctgtgtt gttcggagtt
     1621 ggcgacgatg atgccgcgcg caggcggcgt ctatgttttt ctgcgcgaag cgttcggttc
     1681 tccgatagga tttctgtatg gctggacgtt atttctcgtg gtccaaacgg ggacgatcgc
     1741 agcggtggcc attgcgttcg cgaagtttct cggcgttttt gccacatcag tttcaccgga
     1801 taattatctc gtcccaccaa tctcgttagg cgcttacgcg atcagtttat cgacggaaca
     1861 attgatggcg atagcattga ttgcgcttct gacgtggaca aacacgcgcg ggctcgaggt
     1921 cggcaaaatt gtccagaaca cattcacctt tgcgaaaacc gcagcgctca ccgcagtggt
     1981 ggtgataggt ttgtcgttag gctggaaagc caattctgcc gcactaacta cggcatggtg
     2041 ggactcttgg gccaatggct ggaatccgca ggcggcgcag cccggcttcg ccgtcatcgg
     2101 ctcgcttgct cttgcgctgc tttttggaag gtcgatggtc ggcccgctct ttgcccagac
     2161 cgcgtggacc aacgtgacat ttatcggcag cgaagtgcgc gatccggcaa aaaatcttgt
     2221 acgtgcgctt gtcggagggt gcgcggttgt ggtcgtactt tatttgctgg ctaacgttgc
     2281 ttatctggcg gtgctgtcgc ttccggaaat ccagcacgcg ccacacaacc gcgtggccgt
     2341 agcaatgatg gacgcacttt tcggccgtcc cggagcgttg tgcatggccg cagcgatcat
     2401 gatttccact ttcggttgtg acaacgggct gattctcgcg ggagcgcggg tttactatgc
     2461 catggcgcgc gatggcttgt tcttccgaaa aattgcaacc acaaatcggt ttcatgttcc
     2521 cgcggcagcg ctcgtggcac agggaatttg gacggccctg ctggttttgc cgcgcacggt
     2581 tacaaccaat gtcgcgacac agcaggtgac ttacggcaac gtttacaatc aactgcttga
     2641 atacatcgtc tcggcggact tggtgtttta ccttctgatg atcgtcgctg tcattctctt
     2701 acgacgcaaa aaaccgaatg ctgagagacc ataccgcacg tggggttatc caattgtgcc
     2761 gatcatctca atcatgctat cggcgctgtt gaccattgat cttgcatggc tcgcaccggc
     2821 gacgtcagga atcggaattc tcatcgtgtt gaccggcgtc ccggcttatt tcctatggcg
     2881 gcagcgcggc gcgcgacatg ccagtccggt ttagccccgg cgcgcgaatt atttatgtat
     2941 gcctgcaaaa tcaaaaaaac aacaaatggc agccggcgct gcgcttgcgg cgaagcgagg
     3001 caagcgttcc aagtcgtcgc ttaagggcgc gtcccgccaa atggcgagct cgatgagtac
     3061 aagcgagctg cgaaagatgg caaagacaaa gcgcaagggg aagctcacac gcaaacgcaa
     3121 gaaaaggtag aactcgtatt tggcggccag acagctgcac gagctgaaga ttcacacttg
     3181 cgaagaccag gccgaggaat ctgccgatcg aaaagaaaat aggacgagat caaggctctc
     3241 actctccaac cttgtcgccc tgcattgccg ccatcgcctc tctcaaaggt gcaaagctga
     3301 ccttgcttgt cccggtaaag ggatggtcaa gcacatagac caagaataaa attgacgtaa
     3361 ccgttacggt cagtgtcgtg gtaatgaggt attgggcgcg tatgtttttc atgccgaaga
     3421 aaaaggtgta ggagaccgcg aacacgccgc caacaagcaa taccaaccag atgaccggtg
     3481 gcacggtatt gttaccggaa aatattctca ttcggcgata ctgagccagg ttgtttagac
     3541 atcgtaacga ttcaccgtac agctcccggt tgggaatcga gctcgcgtcc acttgagtga
     3601 acaatattct gagactgttg tgagctccgc cggaataaag ctgaaggtct ccctctgaca
     3661 ttttcgggac ttcatcgttg taaaccacag caaggtaatc cctcactccc tgctgaatga
     3721 ttttcttggg agaatcagga aaggctgcgg cagtgtgaaa aatgtccaga gcctcacttg
     3781 cctccatttg cagatttttg gttgcctcgt cgtatccgct ccaggtaaca aacaccacaa
     3841 acgctaccag caccccataa aacaatccga aggcgttgaa aatgatcgca gcgacttcgt
     3901 ggttctcctt tagcacttcg gccgaatact tccttcgtac caagtaaagc ccggccagac
     3961 tcaagaaggt ggtaatcgcc gagacgataa aaaatgaaat tggcggtgct aactgaagca
     4021 ggaattgcat aatttattaa cccttcagaa aacttgcccc gagtcttatc gcttttgact
     4081 ggttacttca cgtttgagcc gatatccgtc ggcgtgggcg ccgtacccgc tggcgtattc
     4141 aactaatccg acgtcctttt tccagacgat ttttttgaaa tgtccggagg gatgactcgc
     4201 ctcataaatg cagaggtctc ctttcaattt gattgtcgtt ttccactctc cctcctggtg
     4261 ttcgaaggtg ccgttggtga tgccgtaaat gtcgttcggt tgaaaatccg gcggcttgtc
     4321 cagtgcggaa atcttcttag cggccgcgtc gttgtcctct tcgtttaaca ggacgatccg
     4381 gttatcagtc acgataaagt agtccggccg aatttcacgc tgcttttgag cgctcgattt
     4441 tagatcggta aattcgagtt tgaaaatcgc gccccacggc atttttgcca tacgcgttgt
     4501 cactacgcgt gcagtgagcg ggacatcttg ttctccgatg tcttcactcc attcggttcc
     4561 gcgaaatttg gcagagagcg gtgtgtcgtc cggtgtgttc agaaacggat ttgccgcgta
     4621 tcccgaagcc gagatcaaca gcgtcatcat cattgccgac gttcgcccgc aaatcatgag
     4681 atgacgttag caaaccgggc attgacagtg cacgctcgaa tttcctagtc tgccagttct
     4741 gcaaccgttc cggttatggg cccttttggg tttgctgttt gtttcgacgc agccgattca
     4801 tgctcaagaa tctcctgcgt tcgaaaaaat tcgtgacgtt tctcctgatg ggaaattcgc
     4861 tctgcgcatt tcgtgcagca gcgaaccaga agatcctgac aatatcgatt cgagtctgat
     4921 cacggctgcc gatctcgttt cgctgccatc aaagaaggtc gtcgtgaacg tgatggaaga
     4981 aggcactccg cctcatttga tttggtcgcc agattcaaaa tgggttgctt ttcctgtgtc
     5041 agagagccat cgcgttactg acacgcgagt ttatcatcgt tcgggcgagg aattcacgca
     5101 gcttgagacg gaaaacttgc gcgtgaatgc caagggcgcc gtaaggaatg aatacgtcaa
     5161 cccagttcgg tggataaaac cgggcatcct attgcttgag cattcgacat ctttcgcggt
     5221 gggaacggcg aagacgctac ttatcaattc gccgcgaaat ttgacgagaa cccgcaaatt
     5281 tcaaatcggt tcaaagaaaa aagttccgtc taaggaataa cccatttgtg aaaaacatcc
     5341 tagcctcccg cacaattttc attatcatcg cattccttgt ctgtgcgaat gcgccttctg
     5401 ctttcgccaa accacaaaag aaaccggctg gctccaccca ggaaaatccg gatcggctcg
     5461 taaatgccgc gatgaaaaac atggagactg gtgtgtggtc ggtgaacggc acagtcacgg
     5521 ccaggaaacc gatcaagcta caaggccttc ttgccggcga agattttgat ttggcgatgg
     5581 aaccgggcat gaagccaaac acgcccatgc gcgaaatcgt aatcaaagac aaagcctgga
     5641 tttgctccga tggcgagacg tggcacgccg gcaggccgga tgatcgattg atctacaact
     5701 gggcgcacgt gccaatcatg gccgatcgga aattaccgcc atttgagaaa gtggggtctg
     5761 agcaacgcaa cggagagact tggttgcacg ttcgcctcaa aggtcctgag aagaagatca
     5821 acccgaaaga actgccgcaa tattggctcg tcctcgattc tcagggacaa gctcaatacg
     5881 tagggcacac cgagatgccg atgttttcgc aagcccggaa cgaagtgatg tactgctcct
     5941 tcgattatgc cccggctaaa gaaaagatcg cgccaccacc gctaggggca ccagtcgatg
     6001 acaaggcgta tggctttaac gatatcgagc agcacaaggt cgattggaaa ggtagaatcg
     6061 ttaggctgga agtgactccg aaaatcttgg agtccaaaca aattggggag gacacgtacc
     6121 gcgcctttct caaggatacg gcgacaccca atcattacgg gatagtcgaa tttccgcacg
     6181 acgccttggt taagctggga ttcctcaaaa aaatcgtgag tggcgcccac gccacggagg
     6241 aactggaaaa gatgggcgcc ttgggtcgca ccgagggcga accgctttcg ttttacgtcc
     6301 aggtgattcc aatcggcgag aagcccgccg caagagctgt ggccgttggc gcgaggcttg
     6361 tgcgcgatcc cgatggaagc gttagttata cgtgggaagc cgatgacaaa caggctgcga
     6421 aatcatcgcc tgctgctgcg gcgccggacg cttccgacgg cgatctcgtt aatcgcggga
     6481 tcgaaaaagc gaagaacgat gacttggatg gtgccatagc tgatttcaat cgcgctgccg
     6541 aactcaatcc aaaagatgac gcgccctatt ataaccgggc tcaagccagg cgacttaaga
     6601 atgacacggc tggcgctata gccgactaca ccaaagcaat cgaactcggc tcaacaaacc
     6661 cggctgctta caacaatcgc ggcaacgcca gggcggaaaa taaagatcgt gacggcgcaa
     6721 ttgctgatta tacgcgcgcc atcgaactca aacccgatta cgcacgcgcc tactacaatc
     6781 gcgcgatgct gaagaaggag aaggcggatt cggctggggc tgccgcagat ttcaaacgcg
     6841 cccaaaaact ggacccggat ctagtaagtg aaggatcggc ggcggattcc accagcaatc
//
LOCUS       DATDAJ010000056         2900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_290203, whole genome shotgun sequence.
ACCESSION   DATDAJ010000056 DATDAJ010000000
VERSION     DATDAJ010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290203"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..580
                     /locus_tag="VIS53_01290"
     CDS             <1..580
                     /locus_tag="VIS53_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEY5766445.1"
                     /translation="LMESREELKSAGEGADAAKITVNDFVLKAAVMAAVKVPRANASF
                     DNDAIVQYADVDLGVAVAIEDGLLTPVVRAAQDKSLREISALAKDLAHRARNKKMKPE
                     EFQGGTFTVSNLGGMGIDSFSAVINPPQGFILAVGKVTKIPVVDDCDQVMVGHRMSIT
                     MSCDHRVIDGALGAEYLKELRHLLENPALLMV"
     gene            complement(660..1136)
                     /locus_tag="VIS53_01295"
     CDS             complement(660..1136)
                     /locus_tag="VIS53_01295"
                     /inference="COORDINATES: protein motif:HMM:NF018508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HEY5766446.1"
                     /translation="MKTKTKSRSETKKARPAARNSERNVPYRKPALRSEAFARALIDA
                     KACLNDSETLLALFNDAAKKAATVPREPFKEYWPYLQTMLRLVRAYHRGKYDQIPDTA
                     LLWIIAALNYLIDPFDLIPDAIPVLGFVDDATVIEFVTGKTRQTLDDFMMWETAAM"
     gene            complement(1195..2214)
                     /locus_tag="VIS53_01300"
     CDS             complement(1195..2214)
                     /locus_tag="VIS53_01300"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY5766447.1"
                     /translation="MRKRETKKLTPERLQQFGFAYAPPLIISAAVNNKVFDTLDGGAK
                     TVEQLKKEVGGSARGLRVIMDALVGLELLKKDRQSRYSLTPESQAFLISEKPGTLAGF
                     FGSILPVMISRWLRLTDIVRDGQPAVAVNQESEGTEFFGQLVETIIPMSYPGAQKLAD
                     HLKVANAKEHVRLIDLAAGSGIWGIAVAQKSPQVRVTAVDWAGMIPTTKRITEKFGVR
                     DRFDFIEGDLSEADFGNGYHVATLGHILHSEGEQRSRQLLKKTFRALKSGGTIAIAEW
                     LVNDDRTKPVPSLMFSVQMLVNTEKGDTFSFNEIKKWLEDAGFKKVRKLEASGPSPLI
                     LATKP"
     gene            2302..>2900
                     /gene="dgt"
                     /locus_tag="VIS53_01305"
     CDS             2302..>2900
                     /gene="dgt"
                     /locus_tag="VIS53_01305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008832 - dGTPase activity [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dNTP triphosphohydrolase"
                     /protein_id="HEY5766448.1"
                     /translation="MSAKWKTREQMEEGERTALASVAQKSGESRGRQHCEPSHAYRTE
                     FQRDRARIIHSRAFRRLEYKTQVFLNGTGDHLRTRLTHSIEVASISRTIARALRLNED
                     LAEAIALAHDLGHPPFGHSGEEMLAECMRDHGGFDHNRQSVRVVELLETPYPDFSGLN
                     LTFEVREGLRKHERPYKFPAASEEEYDCPSLEGQVADLA"
BASE COUNT          636 a          796 c          803 g          665 t
ORIGIN      
        1 gctgatggaa tcgcgtgagg aattgaaatc tgctggcgaa ggcgcggatg ccgcgaagat
       61 cacggtgaac gattttgttt tgaaagctgc agtgatggct gcagtgaagg tgccgcgcgc
      121 gaatgcctca ttcgacaacg acgcaattgt gcagtacgcg gacgtggatc tcggagtcgc
      181 ggttgcgatc gaagacggac tgctgacacc ggtcgttcgc gcggcgcaag acaaatcgct
      241 tcgcgagatt agcgcgttag ccaaggacct ggcgcatcgc gcccgcaaca agaagatgaa
      301 accggaagaa tttcagggcg gcacattcac cgtctcaaat ctcggcggaa tgggcatcga
      361 cagtttctcg gctgtcatta atccacccca gggcttcatt ctcgccgtgg gcaaagtcac
      421 aaaaatccca gtcgtcgacg actgcgatca agtgatggtc ggccatcgca tgtccatcac
      481 gatgagctgc gaccatcgcg tcatcgacgg cgcgctcggc gccgaatatc tcaaggaact
      541 gcggcaccta ctggaaaacc cagcgctgct aatggtctaa atctgtagcg gcttcgctgt
      601 gcgaagcgcc tcctcgacgc gagcggctcg cacttattgc gtcgcccaca ggccgacggc
      661 tacattgcgg cggtttccca catcatgaaa tcgtccagcg tttggcgggt tttgccggtg
      721 acaaattcga ttacggttgc atcatcgacg aagccgagaa ccggaattgc gtccggaatc
      781 aaatcgaatg gatcgatcag gtaattgagt gcagcaatga tccagagcag tgcggtgtca
      841 gggatttgat cgtatttacc gcgatgataa gcgcgaacta aacgcaacat ggtttgcaga
      901 taaggccaat attctttgaa cggctccctc ggcactgtcg ctgccttttt cgctgcgtcg
      961 ttgaaaagcg ctaacagagt ttcagaatca ttgagacacg cttttgcgtc gatcagcgcc
     1021 ctggcgaatg cttcgctgcg aagcgccggt ttacggtagg gaacatttcg ctcagaattt
     1081 ctcgcagcag gccgggcttt ttttgtttct gagcgcgact ttgttttcgt cttcatctcg
     1141 cgaatcaaaa cacttcggcg cgtggatgag aagcagattc gtaacacgcc actgctacgg
     1201 ttttgttgcc agaatgagcg gtgatggccc agacgcttcg agtttccgca cctttttaaa
     1261 gcccgcgtcc tccagccact ttttgatttc gttaaagctg aacgtgtcgc ctttttcggt
     1321 gttgaccagc atttgcacgg aaaacatcag tgagggaacg ggctttgtgc ggtcgtcatt
     1381 caccagccat tctgcgatgg cgattgtgcc gcccgacttc aaggcgcgaa aagttttctt
     1441 gagcaattga cgactacgtt gttcgccttc gctgtgcaga atatgcccga gcgtcgcgac
     1501 atggtagccg ttgccaaagt ccgcttctga caggtcgcct tcaatgaaat cgaaacgatc
     1561 gcgaacaccg aatttttcag tgatgcgttt cgttgtgggg atcatccccg cccaatcgac
     1621 ggccgtgacc cgcacttgcg gcgatttctg ggccaccgcg attccccaga tcccggaacc
     1681 cgccgcaaga tcgatcaagc gcacgtgctc tttggcgttc gcgactttca ggtgatcggc
     1741 aagcttctgc gcgccgggat agctcatcgg gatgatcgtc tccacgagtt gaccgaaaaa
     1801 ttccgtacct tcgctctcct ggttcacggc gaccgccggc tgcccgtcgc gcacgatgtc
     1861 ggtcagccgt agccagcgcg aaatcattac cggcaaaatc gatccgaaaa atccggcgag
     1921 cgtgcccggt ttttcgctga taagaaatgc ctggctctct ggcgtcagag aatatctcga
     1981 ttgtcgatct ttctttagca attccaggcc gacaagcgcg tccatgatta cacgcaagcc
     2041 tcgcgctgac ccgccaactt cttttttgag ttgctcaacc gtcttcgctc cgccatctaa
     2101 cgtatcaaaa actttgttgt tcacggccgc gctgatgatc aacggcggcg cgtaagcgaa
     2161 cccgaactgc tggaggcgtt caggcgtgag ctttttcgtt tcgcgttttc tcataggtga
     2221 atcgacaaat aattggaaat gcactttagt ccagtggatc tagccgaagt cgccgggttc
     2281 ctttacactt cggataaata aatgagcgca aaatggaaga cgcgcgaaca aatggaggag
     2341 ggggagcgca cagcgctcgc gtccgttgct caaaaatcgg gcgaatcgcg cggacgacag
     2401 cactgtgaac cgagtcacgc ttatcgcacc gaatttcagc gggatcgtgc ccgcatcatc
     2461 cattcgcgcg cgttccgccg cctggaatac aaaacacagg tttttctcaa cggcacgggc
     2521 gaccacttgc gcacgcgcct gacgcattcg atcgaggtgg cgtcgatcag ccgcaccatc
     2581 gcgcgcgcat tgcggctgaa cgaggatctg gcggaagcaa tcgcgcttgc gcacgatctg
     2641 ggccatccgc cttttggaca ttccggcgag gagatgctgg ccgaatgcat gcgcgaccac
     2701 ggtgggttcg atcacaatcg tcagagtgtg cgcgtggttg aattgctcga aacgccttat
     2761 ccagattttt caggtttgaa cctgacattc gaagtgcgtg aaggtttgcg taagcacgag
     2821 cgaccttaca aattccccgc tgcctcagag gaagaatacg attgtccatc gttagagggg
     2881 caggttgccg atctagcaga
//
LOCUS       DATDAJ010000057         7172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_301394, whole genome shotgun sequence.
ACCESSION   DATDAJ010000057 DATDAJ010000000
VERSION     DATDAJ010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7172
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301394"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VIS53_01310"
     CDS             <1..376
                     /locus_tag="VIS53_01310"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5766449.1"
                     /translation="NQDQEGVPNSALEAMATGLPVVATRHGGIPEAVDHGRTGFLVAE
                     EDHVALANAMQLIASSPVLLQEMGARAHATVKERFGQETQIDRLESFYEEAVTMNGAA
                     EHVDERPIARIAPQFAERLPAK"
     gene            527..1420
                     /gene="atpB"
                     /locus_tag="VIS53_01315"
     CDS             527..1420
                     /gene="atpB"
                     /locus_tag="VIS53_01315"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEY5766450.1"
                     /translation="MAVAIVVCGFGLASPAFAAATAGAEQAEPAVSLKPIPILQIGKF
                     VITNSMLVTWIVAAGIIVFAQIATRNIKTIPNGIQNFWEWLVEGLYNFLESIIGRDLV
                     RKTFWFFATIFIFILFVNWFGLIPGVGTIGWGHHDPTTGLFHVDRPLLRGGNADLNMT
                     TAMAAVFFALWLVWAIQAQGVGGFLKHLFGPKGETTGILKVLLAVIFFMVGWLEVISI
                     LFRPVSLSFRLFGNIYAGESILEAMAHMVPLWLAWLPPIPFYFMEILVGVVQALVFML
                     LTAVFTMLIAQHDHGPEHAHG"
     gene            1466..1681
                     /locus_tag="VIS53_01320"
     CDS             1466..1681
                     /locus_tag="VIS53_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HEY5766451.1"
                     /translation="MILPILAEMSGSIHVGLAAMGVGIGVGLTGLGMASAVGRNPGAF
                     TQILVHGILAIAFTEAIVFYALFLLPH"
     gene            1726..2271
                     /gene="atpF"
                     /locus_tag="VIS53_01325"
     CDS             1726..2271
                     /gene="atpF"
                     /locus_tag="VIS53_01325"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEY5766452.1"
                     /translation="MDLIVAAAAAGGLSETLHETAETFGWNFWLFLSQVISFVIVALL
                     LRRFAYKPIVAVLEQRRRTIEEGQLNAEKIKKELAQAETRYQEIIAKANADAQKMIDE
                     ARESAAHLSERKQQEAIGAAEQIIAKAREAAALEHDRTMESLKRELGRLVVDTTAKVT
                     GKVLTQEDQRRLQEEAAREVA"
     gene            2271..2663
                     /locus_tag="VIS53_01330"
     CDS             2271..2663
                     /locus_tag="VIS53_01330"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEY5766453.1"
                     /translation="MKLNKEIRQLSRKMLQASFTDGQLDPDRIASLVDSVIAEKPRNY
                     IDVLKNYKRLLRLEVEKRHATIETASQVDPAIRSEIAANLRSKYGDDLATDFHVDSQL
                     LGGMRIRVGSDVWDGSVRNRLERLQQEL"
     gene            2679..4211
                     /gene="atpA"
                     /locus_tag="VIS53_01335"
     CDS             2679..4211
                     /gene="atpA"
                     /locus_tag="VIS53_01335"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY5766454.1"
                     /translation="MSTILEEIESKIEDLKTSTTKSNVGVVRETGDGVARIEGLSDVM
                     LNEMIEFPNGIYGLALNLEETEVGAILMGDTTKVSEGDEVRTTGRLLSVPVGKALLGR
                     VVNTLGQPLDDKGPIKTETFYPLETIAPGVIKRRSVNQPVQTGLMAIDAMIPIGRGQR
                     ELIIGDRATGKSTIAIDTIISQARLNKAAEDQGDKNYRPLYCIYVAIGQKNSNVARAL
                     AVLEKEGAMPYTTILSAPASDTATNQYLAPFAGAAMGEWFMDNGMDALIVFDDLSKHA
                     VAYRQVSLVLKRPSGREAYPGDVFYLHSRLLERAARMSDEFGGGSLTALPIIETQAGD
                     VSAYIPTNVISITDGQIYLETDLFNQGVRPAISVGLSVSRVGSAAQIKAIKQVAGKVK
                     LDLAQFRELAAFAQFGSDLDAATRARLDRGQRIVELFKQKQYNPIPVEEQVAVMWAMQ
                     NGYLDAVPVERVKEYQLKLQDYLQTRKASLLQTIREKKEVDKDLEAQLKAALDEFKTT
                     WR"
     gene            4229..5104
                     /gene="atpG"
                     /locus_tag="VIS53_01340"
     CDS             4229..5104
                     /gene="atpG"
                     /locus_tag="VIS53_01340"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit gamma"
                     /protein_id="HEY5766455.1"
                     /translation="MANTQDIRRRIKSIRNTAQITKAMQMVAASKMRKAQQHALAGRP
                     YAATMNKVLVSLQNRTDPRFHPLLAIRPLQKELVLIISTDKGLCGALNTNLFREAANF
                     DPAKTSFVVTGKKARQFIARTKRELLADFELKDSPSFVEAKPISKFCMEKFLRREVDK
                     VSVLYTHFINTINQRTVVQTLLPISSFDLPKGEGAQADTKGVDPMIGYIFEPNAEVVL
                     DSVLPYYVSFEVFQMILDARASEHSARMVAMKNATDNANQFIKDLTLEYNKMRQAGIT
                     TELLEIATAQMALGG"
     gene            5114..6523
                     /gene="atpD"
                     /locus_tag="VIS53_01345"
     CDS             5114..6523
                     /gene="atpD"
                     /locus_tag="VIS53_01345"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020045332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY5766456.1"
                     /translation="MNKGNIVQVIGPVVDVEFPDEKTLPKIYSALEIEYEVNGNPTKL
                     TLEVQQHLGESWVRSIAMSSTEGLKRGMSVTDTGGPITVPVGEGVLGRLFNVTGDVID
                     NRGPVNYTKRYPIHRPAPTLTEQDTTAKILETGIKVIDLVCPFTKGGKVGAFGGAGVG
                     KTVVIQELINNIAMKHGGVSIFAGVGERSREGNDLYKEMSEAGVIDQKDLSKSKVGMV
                     FGQMNEPPGARLRVALSALAMTEYFRDERNQDVLLFIDNIFRFSQAGSEVSALLGRTP
                     SAVGYQPTLAAEMGDLQERITSTNKGSITSFQAVYVPADDLTDPAPANTFAHLDSTIV
                     LERAIAELGIYPAVDPLASTSKALAPEIVGEEHYDVASGVQRVLQRYKDLQDIIAILG
                     MDELSPEDKVTVQRARKIQRFLSQPFHVAEVFTGYKGQYVPVAETVRGFKEILDGKHD
                     DVPEQNFYMKGGIDTIKEG"
     gene            6607..7014
                     /locus_tag="VIS53_01350"
     CDS             6607..7014
                     /locus_tag="VIS53_01350"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEY5766457.1"
                     /translation="MATLKLEIVTPEERIYSEDVEMVTLPGSEGELGVYPKHVPLLTT
                     LVPGELRIVKSGHESTMAIGEGFVEIKGDAVSVLTDMALESEKIDIATAEAAVERAKA
                     AMKEDHSAEEVAAIQASLQKALAQLHVKRRRHG"
BASE COUNT         1759 a         1824 c         2048 g         1541 t
ORIGIN      
        1 aaaccaagat caggaaggtg tgccgaactc agcgctggaa gcaatggcaa caggcttacc
       61 agtggttgcg acgcgccatg gtggaatacc cgaagcagtc gatcacgggc gcaccggatt
      121 tttggtagcg gaggaggatc acgttgcttt agcaaatgcg atgcaactaa tcgcgagttc
      181 gcccgtcctg ttacaggaga tgggagcgcg cgcgcacgct acggtaaagg aacggtttgg
      241 ccaggaaacg cagatcgatc gcttggaatc gttttacgaa gaagcggtca cgatgaacgg
      301 ggcggctgaa cacgtggacg aaaggccaat cgcgcgcatt gctccgcaat ttgccgaacg
      361 tttgccggcc aaataggcgc gcgcttagaa ttttgtttgt catcagggta aaacgcgctt
      421 tggtatgcgc gtcaagttcg tggttcgggc ttgcagcccg aagatcacgg gtaaggatgt
      481 ccgtgtcact tggcgaccaa atcaaatgcg caatcgttgt tttcttttgg cagtagcgat
      541 agtggtttgc gggttcggcc tcgcatcgcc cgcatttgct gcagcgactg caggtgccga
      601 gcaggccgaa ccggcggtgt cgctgaagcc gatcccaatc ctgcagatcg gcaaatttgt
      661 cattacaaac tcgatgttgg tgacgtggat tgtggcggca ggaatcattg tttttgcgca
      721 gatcgcaaca cgaaacatca agacgattcc caacggcatt caaaatttct gggaatggct
      781 ggttgaaggc ctgtacaatt ttcttgaatc gatcattggc cgcgacctgg tgcgcaaaac
      841 gttttggttc tttgccacga tcttcatctt cattttattc gtgaattggt ttgggttgat
      901 cccgggagtc gggacgatcg gctggggtca tcacgatcca accacgggcc tctttcatgt
      961 tgatcgcccg cttttgcgcg gtggcaacgc agacctcaac atgaccacgg cgatggcagc
     1021 agtgttcttt gcgctgtggc tggtctgggc gatccaagca cagggtgtcg gcggattcct
     1081 gaaacacctg ttcggtccaa aaggcgaaac gacaggtatt ctcaaggtgc tgctggcagt
     1141 gatctttttc atggtcggct ggctcgaagt catttcgatc ttgttccgtc cagtttcact
     1201 gagctttcga ctgttcggga acatctatgc tggagaaagc attttggaag caatggcgca
     1261 tatggtgccg ttatggctgg catggttgcc gcccattcca ttttacttta tggagatact
     1321 ggtgggcgtt gtgcaggcgc ttgtgttcat gctgctcacc gccgtgttca cgatgctgat
     1381 cgcgcagcat gatcacggcc cggaacacgc acacggttaa atttcgctgg accgataacg
     1441 gctccggcaa aacaacagaa aaactatgat actaccaata ctcgcagaaa tgagcggaag
     1501 cattcacgtc ggtctggccg cgatgggcgt cggcatcggc gtgggactaa caggtctagg
     1561 aatggcatcg gcagtcggac gcaatcccgg tgcctttacg caaatcctcg tgcatggaat
     1621 tctcgcgatc gcgtttacag aggcgatcgt gttctatgcg ttgttcttgc tgcctcacta
     1681 atgttgttgt cctcgatcgt gtaacagcat gccggctttt caaatatgga tctgatcgtc
     1741 gccgccgctg cggcgggtgg tttgagtgaa acgctgcacg aaacagccga gactttcggc
     1801 tggaattttt ggctgttctt gtcgcaggta atcagcttcg tgatcgtggc gttgcttttg
     1861 cgacgcttcg cttacaaacc gatcgttgcg gtgctggagc agcgcaggcg cacaattgag
     1921 gagggacagc tcaacgcgga gaaaatcaaa aaagagctcg cacaagcaga aacgcgatac
     1981 caggaaatca tcgccaaagc gaatgccgac gcgcaaaaga tgatcgacga agcgcgtgaa
     2041 agcgcggccc atctgtccga gcgcaagcag caggaagcga ttggggcagc cgagcagatc
     2101 attgccaaag cgcgtgaggc cgcagcgctt gagcacgacc gcacaatgga atctctgaag
     2161 cgcgagcttg ggcggcttgt agtcgacact acggcgaagg tcacggggaa agtattaacg
     2221 caggaagatc aacggcgttt gcaggaggaa gcagctcgag aagtggcctg atgaagctca
     2281 ataaggaaat tcgtcaactc tcgcgcaaaa tgcttcaggc aagtttcact gatggacagc
     2341 ttgatcctga cagaatcgcg tccctggtcg attcggtcat agcagaaaag ccacgcaatt
     2401 acattgatgt gctaaaaaac tacaaacgtt tgcttcgact cgaggtagag aagcgccatg
     2461 ccacgatcga aaccgcgagc caagtggatc ccgcaatacg ttcagagatt gcagccaatc
     2521 tgaggagcaa atacggcgac gacctcgcta ctgattttca cgttgattct cagcttcttg
     2581 gcggaatgcg catccgcgtg ggaagcgatg tttgggacgg aagcgtgcgc aaccgcctcg
     2641 aacgtcttca acaagaactt taatcagaat tcaaaaccat gagcaccata ctcgaagaga
     2701 tcgaatcgaa aattgaagac ctaaaaacat ccacgaccaa gagcaacgtg ggcgttgtgc
     2761 gcgagaccgg cgacggcgtg gcgcgcatcg agggtctgag cgacgtgatg ctcaatgaaa
     2821 tgatcgaatt tcccaacggc atttacggtc tcgcgctcaa tcttgaagaa actgaagtgg
     2881 gcgccatttt gatgggcgac acgacgaagg tttccgaagg cgacgaagtt aggacaaccg
     2941 gccgacttct ttccgttccc gtcggcaagg cgcttttggg ccgtgtggta aacacactcg
     3001 gccagccgct cgatgacaag ggaccgatca aaaccgaaac attttatccg ctggaaacaa
     3061 ttgcaccggg cgtcattaag cgccgcagcg ttaatcagcc ggtgcaaacc ggcctcatgg
     3121 ccattgacgc gatgattccg atcggtcgcg gccagcgcga gttgatcatc ggcgaccgcg
     3181 caaccggcaa aagtaccatc gccatcgaca cgatcatcag ccaggcccgt ttgaacaagg
     3241 cagctgagga ccagggcgat aagaattatc ggccgcttta ctgtatctac gtcgcaatcg
     3301 gtcagaaaaa ttccaacgtg gcgcgcgctc tcgcggtact cgaaaaagaa ggcgccatgc
     3361 catacacgac gatcctttcg gcaccggctt cggataccgc cacgaaccaa tacctggcgc
     3421 catttgcagg cgccgcgatg ggtgagtggt tcatggataa tggaatggat gcgctcattg
     3481 tcttcgacga tttgtcgaag cacgcagtgg cttatcggca ggtttcgctc gtgctgaagc
     3541 ggccgtcggg tcgcgaagcg tatccgggcg acgtgtttta cctgcactcg cgcttgctcg
     3601 aacgcgccgc gcgcatgagc gatgaattcg gaggcggctc attaaccgcg ttaccgatca
     3661 tcgagaccca ggccggcgac gtctccgcct acattccgac aaacgtgatc tcgattacgg
     3721 atgggcaaat ctatcttgag actgatttgt ttaatcaagg tgtgcggcca gcaatttccg
     3781 tgggactctc tgtcagccgt gtcggatcgg ctgcccagat caaggcgatc aagcaggtcg
     3841 cgggcaaagt gaagctcgat ttggcacagt ttcgcgagct cgctgcgttt gcacaatttg
     3901 gttcagacct cgacgcggcg acgagagccc gactcgatcg cggtcaacgt attgtcgagc
     3961 tttttaagca gaaacagtac aacccaattc cggtggaaga acaagtggct gtgatgtggg
     4021 cgatgcaaaa cggctacctc gacgctgttc ctgtcgagcg ggtcaaagaa taccaattga
     4081 agcttcagga ttacctgcaa acacgcaaag ccagtttgct ccaaacgatt cgcgagaaaa
     4141 aagaggtcga taaggacctc gaggcgcaat tgaaggcggc gctcgacgaa tttaagacca
     4201 cttggcggta atctaagtag gcgtttagat ggcgaacacg caggacatac ggcgccggat
     4261 caaatcgatc cgcaacaccg cgcaaatcac caaagcaatg caaatggtgg ctgcgtccaa
     4321 gatgcgtaaa gcgcagcagc atgccctcgc cggacgccct tacgcagcaa cgatgaataa
     4381 ggttcttgtt tccttgcaaa accggacaga cccaagattt cacccgctgc ttgccatccg
     4441 tccgctccag aaggagttgg tgttaattat cagcacggac aagggactct gcggagcgtt
     4501 gaacacgaat ctctttcgcg aagcggcgaa ttttgatccg gctaagacga gctttgtagt
     4561 gacgggaaag aaggccagac aatttatcgc gcgtaccaaa cgggaattgc tggcagattt
     4621 tgagctgaaa gattcgccca gcttcgttga ggcgaaacca atctcgaaat tctgcatgga
     4681 aaaatttctg aggcgggaag tggacaaggt ttcggtgctt tacacccatt tcatcaacac
     4741 gattaatcaa cgcaccgtcg tacaaacact gttaccgatc agcagctttg atttgcctaa
     4801 gggggaaggt gctcaagctg acactaaggg cgtcgatccg atgatagggt acatttttga
     4861 gcccaatgcc gaggtcgtgc tcgactcggt gcttccctat tacgtttcct ttgaggtttt
     4921 tcagatgatt ctcgacgcgc gcgcgtctga gcacagcgcg cgaatggtgg cgatgaagaa
     4981 cgccaccgat aacgcgaatc aatttatcaa ggaccttacg ttggaataca acaagatgcg
     5041 ccaggccggc atcacaaccg agttactcga gatcgccaca gcgcagatgg cactcggtgg
     5101 ttagtcaaga tttatgaata aaggaaacat agttcaagta atcggtccgg tagtggacgt
     5161 ggaatttccg gacgaaaaga cgctgccgaa aatctacagc gccctcgaaa ttgagtatga
     5221 agtgaacggt aacccaacga agttgacgct cgaagtgcaa cagcatcttg gcgaaagctg
     5281 ggttcgctcc atcgccatgt cttcgacgga agggttaaag cgcggaatga gcgtcaccga
     5341 tactggcggt ccgatcaccg taccagtagg cgagggcgtg ctcggtcgcc tttttaacgt
     5401 cactggcgac gtgattgata accgtggccc ggtgaactac acgaagcgtt acccaatcca
     5461 ccgcccggcg ccgaccctca cggagcaaga cactacggca aagattttgg aaacggggat
     5521 caaggtcatc gatcttgtgt gcccatttac aaaaggcggc aaagtcggcg catttggcgg
     5581 cgcaggcgtc ggcaagactg ttgtcatcca ggagctaatc aacaacatcg ccatgaaaca
     5641 cggcggggtt tcgatatttg cgggagtagg cgaacggagc cgggaaggca atgatcttta
     5701 caaggaaatg agcgaggcgg gcgtgatcga tcaaaaagac ttgtcgaagt cgaaagtagg
     5761 gatggttttc ggtcagatga acgaaccgcc gggcgcgcgt ttacgcgttg ctctttctgc
     5821 ccttgcaatg accgaatatt ttcgcgacga gcgcaaccag gacgtgcttc tgtttatcga
     5881 caacatcttt cgattctcgc aagcgggctc ggaagtgtca gcgttgctgg gccgaacgcc
     5941 gagcgcggtt ggctatcagc cgacgcttgc tgctgagatg ggtgatttgc aggagcgaat
     6001 tacatccaca aataaaggat cgatcacttc gttccaggca gtctatgttc cagcggacga
     6061 tctcactgat cccgcgccgg caaacacttt tgcgcacttg gattcgacca tcgtgcttga
     6121 gcgtgccatc gccgagctcg gaatttatcc tgcggtcgat ccgctggcat caacatcgaa
     6181 agcgcttgca ccggagattg tcggcgagga gcattatgac gttgcaagcg gcgtgcagcg
     6241 tgttttgcag cgttacaagg atttgcagga cattatcgcg attctcggaa tggatgaact
     6301 aagcccggag gacaaggtca ctgttcagcg cgcacgcaag attcagcggt tccttagcca
     6361 gccatttcat gtggctgaag tctttaccgg ctacaaaggt caatatgtcc cggttgcaga
     6421 aacagtccgc ggttttaagg aaattttgga cggcaagcat gacgacgtgc ccgagcaaaa
     6481 tttctacatg aagggcggca tcgatacgat taaggaaggt tgaagcgatg aagcaatcaa
     6541 gcgatgaagc ggaaagagcc agcttggcga gccccgcttc aacacttcaa cgcctaacga
     6601 ctcactatgg ccacactaaa gcttgagatc gtaacgcctg aggaaagaat ttattccgag
     6661 gacgtagaga tggtgacgct gcccggctcg gagggcgagc ttggtgttta tccgaagcac
     6721 gtcccgctcc taaccacttt ggtgcctggc gaactgcgca tcgtaaaaag cggccatgag
     6781 agcacgatgg ccatcggcga agggtttgtg gaaatcaaag gagacgcggt ttcagtgcta
     6841 accgacatgg cgctcgaatc agagaaaatc gacattgcta cagccgaggc tgcagtggag
     6901 cgcgccaaag cggccatgaa ggaagatcac tccgccgaag aagtagctgc catccaggct
     6961 tcgctgcaaa aagcgctggc ccagttgcac gtcaaacgcc gtcgccacgg ctaacgattt
     7021 gtagaggcgc tcgccgaggc gagcgtctgt ttaatcaaga tttgctgctt tggtacagcc
     7081 accgctaccc gccttgggaa taattgccgg caacggcatc tacccgcgat tgctcgccga
     7141 cggagcgcgt agagccggcg ttgaaaaaat cg
//
LOCUS       DATDAJ010000058         7464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_315437, whole genome shotgun sequence.
ACCESSION   DATDAJ010000058 DATDAJ010000000
VERSION     DATDAJ010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7464
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315437"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VIS53_01355"
     CDS             <1..260
                     /locus_tag="VIS53_01355"
                     /inference="COORDINATES: protein motif:HMM:NF016141.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY5766458.1"
                     /translation="SMLHIIWYIIVGFVVGLIARAIMPGAQHLGFIMTTLLGIAGSIV
                     GGFIGRLFSKPEPGSTFHPAGLIMSIIGAIILLFIWIKLVV"
     gene            432..1106
                     /locus_tag="VIS53_01360"
     CDS             432..1106
                     /locus_tag="VIS53_01360"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HEY5766459.1"
                     /translation="MNKYIAEFIGTFFLVLTIGCTGIGAGAGVIAPLAIGAALMVMVF
                     AGGHISGAHYNPAVTLGVLIRGKVNATDVVPYWVAQLAGAAVAALIVSKVFRAGVAVT
                     PIAPLVGPALLAEFLFTFALVYVVLNAATAEGTSGNSFYGLAIGMTVMTGAFAVGDIS
                     GGAFNPAVALGICILGISSWANIWIYLLADFAAAVVAAIVFQLINQPMQTTPIATDEP
                     PYETPD"
     gene            1132..1578
                     /locus_tag="VIS53_01365"
     CDS             1132..1578
                     /locus_tag="VIS53_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766460.1"
                     /translation="MTQLKAIAVIAIVCVAASFVNAATIPAGTTLIVSTVSQFSSKTV
                     VGRSFEAKLAQNVSINGHVVLKAGSKTFGKIATSRYNPRKNEPLTVELTSVSVNGRNV
                     AVKTNAFQPGSSPVTARQAHYGHTAGTLLINTGTVMQFQLLQSVTL"
     gene            complement(1614..2651)
                     /locus_tag="VIS53_01370"
     CDS             complement(1614..2651)
                     /locus_tag="VIS53_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HEY5766461.1"
                     /translation="MRVIRWFSALLVVLAASIAIAWAFGAVWYDAPFGNVNKVAAALL
                     AITFVVILLFVRPFWRKLVVVVVLFVGVLTWWLTLSPTNDSDWQPDVAREAWADIQGD
                     EVTFHNVRNCDYRTETDYTPRWETRTVRISQITGIDLAINYWGSPWIAHPIVSFQFAD
                     APPLCFSIEIRKKLGQTYSTIGGLYRQFELIYIVADERDVIRLRTNYRKEDIYLYRTT
                     ASPAQARERFLEYIHSLNALRNTPRWYNAITTNCTTSIRAQHPRNERVPWDWRILLNG
                     KGDELMYERHAIVTDGLPFAELKTRSLIDTRARAANDSPDFSQLIRKDLPFALPSDGN
                     VTVRSSKNSWE"
     gene            complement(2788..4434)
                     /locus_tag="VIS53_01375"
     CDS             complement(2788..4434)
                     /locus_tag="VIS53_01375"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY5766462.1"
                     /translation="MRLKNAKVSIRLIAAVTCLAFFASCATAPQAVRGPEYAPTASLM
                     REARSANAPVEKRAADYLQAAAMTAALLGTGIGTPACETYNAACGELTVLLRSSEGGR
                     LWNHPLTLTGSDQTYHLRLEPASNAVWSPDYFTFFVPSAEIKEKLIKKENHQEGVGGS
                     LVGVRTVTPPENFAAHKGIPAAVTATLDFKRNDATLALRRPFRQPTALVQGKIRPLEA
                     DFSAPVSYYQPPGNVLLIGLLGGLRSDRYMDKTGLYFLQPYDPDRIPLVLVHGLFSTP
                     FDWAQTINGLQADPEIRKHYQFWVFGYPTGNPILYSALRLREELTRVDKLYPNHRPYV
                     VVGHSMGGMLTRMQTITVTKPMWEKGLGETAKSIFRENSSDSLVVRATTFQANPRIKR
                     VVFICTPHRGSTMASSGLGRFGTSLIALPLNIASVLKDTLTSAELVQLTGSSKRLPNS
                     ITGLKPSNPALPVVNEARISVPYHSIIGDRGKDHCPDCTDGVVPYWSSHLDGAQSEVI
                     VPGPHGACELPQTIAELDRILRLHLRTSSPSRGILAQAAP"
     gene            complement(4580..5155)
                     /locus_tag="VIS53_01380"
     CDS             complement(4580..5155)
                     /locus_tag="VIS53_01380"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY5766463.1"
                     /translation="MTKEEHSWLEALDSALRSDSVREHIRYVVARIREQLARRKDVLM
                     GWEPFPLEALATTLPPKIRSAWVFVLRAGAGICCIHAVVTVEVLCASIAAYLMLGLMW
                     TVAYWLVDQVTPGGAFSFNTNRGTQSMNGFTGFYFSFITLSTVGYGDITPVSRAARWL
                     AAMEAMTGLLYVAVLIARLVSLYSSAKSDDS"
     gene            5193..5903
                     /locus_tag="VIS53_01385"
     CDS             5193..5903
                     /locus_tag="VIS53_01385"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEY5766464.1"
                     /translation="MKQLALIKFLSAATIVCADVPITQDELVRRTQELYDAVVPGNQA
                     PWKKHFADDCIFADEKGRIFDKPKLIADITPLPAGYSGTIKVENVQSRIIGNTAVLSY
                     DADETETIFGQNLKARYHITDTWLQRNGNWQIIASQAHRYYEDPAVGKAEPKKFADFI
                     GTYELAPGQTRSVMHEGDKLFVERNGKKEQLLPETSELFFRKGVEGRILFRYSANGKV
                     DAIIDRRNNENVIWRKTK"
     gene            complement(5995..6963)
                     /locus_tag="VIS53_01390"
     CDS             complement(5995..6963)
                     /locus_tag="VIS53_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HEY5766465.1"
                     /translation="MKAIRVKEFGGQEVLRLEEVPTLKPGPGQVLVRMHAIGINPVET
                     YIRAGTYARLPELPYTPGNDGSGVVEQAGADVSEFKPGDRVYTSGSISGTYAEFALCK
                     ADQVHPLPANVSFEQGAAMGTPYATAYRGLLQRADAKAGETVLVHGASGGVGTAAVQL
                     AHAHGLRVLGTAGSDDGIKLARQQGAHEVFDLRAPDHFEQIMKATGGHGVDVIVEMLA
                     NVNLGKDLTILAKGGRVVIIGSRGPVEINPRDTMQRDADVRGMILPNTSPTELANIHA
                     ALVAGLENGTLRPVIGKEFTLTDATEAHRAVMEPGALGKIVLLPQK"
     gene            7149..>7464
                     /locus_tag="VIS53_01395"
     CDS             7149..>7464
                     /locus_tag="VIS53_01395"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HEY5766466.1"
                     /translation="MKVPVVIKEVRKVPARLSAIHHRNPIQIENMRLSSFVAFIFDID
                     GTLVDSNELHIDSWDRAFRRFGKQFPREQLRAQIGKGSDQYLPEFLTPEEIKRFGKEL
                     DEY"
BASE COUNT         1679 a         2048 c         2025 g         1712 t
ORIGIN      
        1 aatctatgct gcacatcatt tggtacatca ttgtcggttt cgtcgtcggt ttgatcgcac
       61 gcgccattat gcccggcgca cagcatcttg gtttcataat gaccactttg cttgggatcg
      121 ctggctcgat cgtcggtggg tttatcggcc ggttgttttc caaaccggaa ccgggttcaa
      181 cctttcatcc ggccggcctt attatgtcga tcattggcgc gatcattctg ctctttattt
      241 ggataaaatt agtggtctga cgaaggcatt cgggttgttg ccacgttcga agtgagaggc
      301 aaacagtgcc tgtctatttg gcattagtcc ctgccggttt gggtttgctg ttgccacgcc
      361 gcaggtaaga ccaaagtccc attgttaatc tgtcttgctt ttttcaacct ctatcagcta
      421 acaatcagcc tatgaacaag tatatcgccg aatttatcgg aacattcttt ctcgtcctga
      481 caattggctg cacgggaatc ggcgctggcg cgggggtcat cgcgccgctc gccatcggcg
      541 cagcgctaat ggtgatggtt tttgccggcg gccacatctc tggggcacat tataatccag
      601 cagtcacgct cggcgtactg atccggggca aggtgaatgc gactgacgta gtaccttact
      661 gggtggcaca gctcgccggc gccgccgtcg cggcactgat cgtgagtaag gtctttcgcg
      721 ccggtgtagc tgttactccc atcgcaccgc ttgttggtcc agcgcttctt gcggaatttc
      781 tttttacgtt tgcgcttgtc tacgttgtgt tgaacgccgc cacggcggaa ggcacttcag
      841 gaaattcatt ttatggtttg gccatcggca tgaccgtgat gaccggcgca tttgccgtgg
      901 gtgacatttc aggcggcgca ttcaatcccg cggtcgctct gggcatctgc atccttggga
      961 tttcaagttg ggcaaacatc tggatctatc tgctggccga ttttgctgct gctgttgttg
     1021 cagccattgt ttttcagtta atcaatcagc cgatgcaaac aaccccgatc gctacagacg
     1081 agccgcctta cgaaacgccc gactgaaatc tcaaccaact cttagaatcc tatgacacaa
     1141 ctcaaagcca ttgcagttat cgcgatcgtc tgcgttgccg cgtcatttgt aaatgcagcg
     1201 acgattccgg ctggaacaac actgatagta agtaccgtta gccagttcag ctcgaaaact
     1261 gtggtaggca ggagtttcga ggcgaagcta gctcagaacg tctcgatcaa cggacacgtt
     1321 gtattgaaag ctggaagtaa aaccttcgga aagatcgcga cttctcgcta caatccgcgc
     1381 aagaacgagc cgctcacggt ggaattgacg tctgtttcgg tgaatggtcg caacgtcgcg
     1441 gtgaagacga atgcgttcca accgggaagc tcgccggtca cagcgcgcca ggcgcactat
     1501 ggacacaccg caggaacgtt actgattaac accgggaccg tgatgcaatt ccagcttttg
     1561 caatcagtga cgctgtgatg gctgatttag ctcactaagc cgaaaactct gcattactcc
     1621 caagaattct ttgatgaccg gacggtgacg ttgccgtcgg acggaagcgc gaaaggcaga
     1681 tctttcctga tcaattgtga aaaatcagga gagtcgttag cggcgcgggc gcgcgtgtcg
     1741 atcaagcttc gggtctttag ctcggcaaag ggaagtccgt cggtcacgat ggcatggcgc
     1801 tcgtacatca gttcgtcgcc tttcccattc agcaggatcc gccaatccca tggcacgcgc
     1861 tcattgcgtg gatgctgtgc gcggatgctc gttgtacagt tggtagtgat tgcgttatac
     1921 caacgcggtg tgttccgcag agcgttaagc gaatggatgt attcaagaaa ccgttcgcgc
     1981 gcctgcgctg gcgaagcggt cgtacgataa aggtagatat cttccttgcg atagtttgtg
     2041 cgcagtcgga tcacgtcgcg ttcatcggcc acgatgtaga tgagttcgaa ctgccggtag
     2101 agtccgccga tagtcgagta agtttgacca agcttcttgc gaatctcgat cgagaagcag
     2161 agcggcggcg cgtcagcaaa ttggaagctg acgatgggat gcgcgatcca gggcgagccc
     2221 cagtaattaa tcgcgaggtc gatgccggtg atctgcgaga tgcgtacggt acgcgtctcc
     2281 caacgagggg tgtagtcggt ctcggtgcgg tagtcgcagt tgcgcacgtt gtgaaatgtt
     2341 acttcgtcgc cttgaatgtc ggcccacgct tccctggcca cgtccggctg ccagtcgcta
     2401 tcgttggtgg gagaaagcgt cagccaccag gtgagcacgc cgacaaagag cacgacaacg
     2461 acgaccagct ttcgccagaa tggcctaacg aacaggagga tgaccacgaa cgtgatggca
     2521 agcagtgcgg ctgcaacctt gtttacgttg ccgaacggag cgtcatacca tacggcgcca
     2581 aatgcccagg cgatagcaat gctggctgca aggacaacga gcaatgcgct aaaccatcga
     2641 atgactcgca tcagattacg ttacgaacgt ttgggaaact gaggcgaaga gccagcatga
     2701 tggtgcatgc ttcgcagaaa cagctgcggc aagtgggata acagtaagaa gcagcaaccg
     2761 atcagtcgca aagtggtgcg taccgagtca aggagccgcc tgagccagga tccctcttga
     2821 ggggctgctc gtccttagat gtaaacgcaa aatccggtca agctcggcga tggtttgcgg
     2881 cagttcgcat gccccgtgcg ggccgggaac aatcacttcg gattgggcgc catcgagatg
     2941 agagctccag taggggacga caccatcagt gcagtccggg caatggtcct tcccgcgatc
     3001 accgatgatc gagtgatacg gaacgctgat ccgcgcttca ttgactacgg gcaacgctgg
     3061 atttgacggt ttcagaccag tgatactgtt ggggagacgt ttggaacttc cggtcaattg
     3121 cacaagttct gcgctggtga gtgtgtcctt caggaccgag gcaatgttaa ggggaagagc
     3181 gatcaagcta gtaccaaatc tacccaatcc gctgctggcc atcgtgctcc cgcgatgcgg
     3241 agtacaaatg aacacaacac gtttaatccg aggattagcc tgaaatgttg tggcacgtac
     3301 aaccaagcta tcgcttgaat tttccctaaa aatgcttttc gcggtttccc ccagaccttt
     3361 ctcccacatc ggctttgtga ccgtaattgt ctgcatgcga gtaagcatcc cgcccatact
     3421 gtgacctaca acaacgtacg gacggtggtt cggataaagt ttgtcgaccc tggtgagctc
     3481 ttcgcgcaat cgcaatgcag aatagaggat gggattgccg gtcggatagc caaagaccca
     3541 gaactggtaa tgtttacgga tttcagggtc ggcttggagt ccattgatcg tttgcgccca
     3601 gtcgaatggc gttgagaaga ggccgtgcac aagaacaagc gggatccggt cgggatcgta
     3661 aggctgcagg aaatacaagc cagtcttgtc catatagcga tcggatcgaa gtcctcccag
     3721 caatccgatg agcagaacat tacccggcgg ctggtagtaa ctgactggtg ccgagaaatc
     3781 ggcttcgagc ggacgtattt ttccctgaac gagcgccgtc ggttgtctga agggacgccg
     3841 cagagccaaa gtagcgtcgt ttcgcttgaa atcgagcgtg gctgtgacgg ctgcgggaat
     3901 gcctttgtgg gccgcaaaat tttcgggcgg agtaacagtt cgcactccga cgagggaccc
     3961 gcccacgccc tcctgatggt tttccttttt tatcaatttt tctttgatct ccgcggaggg
     4021 cacaaaaaag gtgaagtagt caggcgacca gactgcgtta ctggcgggtt caagccgtag
     4081 gtggtaggtc tggtcgcttc cggtcagggt gagcggatga ttccacagcc gtcctccttc
     4141 actcgagcgc agcagaacgg taagttcgcc acatgctgcg ttgtaggttt cacaggcggg
     4201 tgtcccaatt ccggtcccaa gcaatgctgc ggtcatggcg gcagcctgca aataatcggc
     4261 tgctcgcttt tcaactggtg cattcgcgga gcgtgcctct cgcatcaggc tcgccgtcgg
     4321 cgcatattcg ggaccccgta ctgcctgcgg cgccgtcgca cagctggcga aaaatgcgag
     4381 acacgtgaca gcggcgatca ggcgaatgga tacttttgcg tttttaagcc tcataagtgt
     4441 tggggggttc agacggttgg cgatgataat caagaagtat gtgcgcgcag caagttttcc
     4501 tataagactt tgggactacg tgtgcgtcgt cgagaaattc acgccgtcgc ccgtccctcc
     4561 aactgatgaa acagcttgct caggaatcat cggatttcgc gctcgaataa agtgaaacca
     4621 accgggcgat taggaccgct acataaagca gacccgtcat cgcttccatt gccgcgagcc
     4681 agcgcgcagc tcgtgaaacc ggagtaatgt ccccgtaacc gacagtgcta agagtgatga
     4741 agctaaaata aaatccagtg aatccgttca tcgactgtgt accgcgattg gtgttgaaag
     4801 agaaagctcc gccgggtgtc acctgatcca caagccaata ggcgaccgtc cacatcaagc
     4861 ccagcatgag gtaagccgcg atgcttgcgc agagcacttc cacggtcacg acagcatgaa
     4921 tgcagcaaat gcccgcgccc gcgcgcaaaa caaaaaccca cgcagaccga atcttcggcg
     4981 gtagtgtcgt tgcgagagct tccaacggaa acggctccca acccattagc acatcttttc
     5041 tgcgagccag ttgctcgcga atgcgtgcaa caacatagcg aatgtgttcg cgcacgctgt
     5101 ccgatcgcaa agcgctgtcg agcgcctcaa gccacgaatg ctcctctttc gtcatttcgt
     5161 atatttttaa tccttatttc ttaatcattc ttatgaaaca gctcgcgctc attaaatttc
     5221 tttccgctgc aaccattgtc tgcgcagatg ttcccattac gcaggacgaa ctggtccgac
     5281 gcactcaaga gctttacgat gccgtggtac ccggcaatca ggcgccgtgg aaaaaacatt
     5341 tcgccgacga ctgcatcttc gccgacgaga aaggacgcat tttcgacaaa ccgaagctga
     5401 tcgccgacat cacaccgctg ccggccggat attccggaac gattaaggtc gagaacgttc
     5461 agagccggat cattgggaac acggcggtac tcagttacga cgcggacgag accgagacga
     5521 ttttcggcca aaatctgaaa gcgcgatatc acatcactga cacgtggctt cagcggaacg
     5581 gcaattggca gatcatcgcc agtcaggcac atcgctacta tgaggaccct gcggtgggaa
     5641 aagccgagcc gaaaaagttc gccgatttca tcggcacgta cgaactggcg cctgggcaaa
     5701 caaggtcggt catgcatgaa ggcgataagc tattcgttga acggaacggc aaaaaagagc
     5761 aactgctgcc ggagacgtca gagcttttct tccgcaaagg cgtcgaaggc agaattctgt
     5821 tccgttactc tgctaacggt aaagtcgacg caataattga ccgtcgtaac aacgaaaacg
     5881 tcatctggcg aaaaacgaaa tagttcgcga tcacttcagt ttgtttcctg gcttcctggt
     5941 tggaaagcct ggccgttgct ttgcatccgt tgcagcctga ttcggtttcc gttcctactt
     6001 ttgcggcaag agcacgattt ttcccagcgc tcctggttcc atcaccgctc gatgcgcctc
     6061 ggtcgcgtca gtcagcgtaa attctttgcc gatcaccgga cgtaacgtcc cgttttccag
     6121 accggccacg agcgcggcgt gaatatttgc cagctctgtc ggggacgtgt tcggcaaaat
     6181 cataccgcgc acatcggcat cgcgctgcat cgtgtcgcgc ggattgatct ccactgggcc
     6241 gcggctgccg atgatcacga cgcgtccgcc ttttgcgagg atggtcagat ctttcccgag
     6301 attcacattc gcgagcattt ccacgatcac atcaacgccg tgtccgccgg tcgctttcat
     6361 tatctgctca aaatgatcag gtgcgcgaag atcgaacact tcgtgggcgc cttgttgacg
     6421 tgcgagcttg attccgtcat cgctgcccgc cgtgccgagc acgcgcaaac cgtgagcatg
     6481 cgccagttgc accgctgcag tcccgacacc gccactcgcg ccgtgcacca gaaccgtttc
     6541 accagccttt gcatcggcgc gctgcaacaa cccgcgatat gccgtcgcgt acggcgtccc
     6601 catcgccgcg ccttgctcga acgaaacgtt tgccggcaac ggatgaactt ggtctgcttt
     6661 gcacaacgcg aactctgcat acgttccgct gatcgatccc gaggtgtaaa cacgatcgcc
     6721 gggtttaaac tcactcacat ccgcgccggc ctgctcgacc acgcccgagc cgtcattccc
     6781 cggtgtgtaa ggcaactccg gcagtcgcgc gtacgttcct gcacgaatat aagtctccac
     6841 cggattgata ccgatcgcgt gcattcgcac gagcacctga ccagggccgg gtttcaacgt
     6901 cggcacttct tccagccgca gaacttcctg cccgccaaat tctttcactc tgattgcttt
     6961 cacgcgttct tgcttcctcc tgttcagttc tctttttgtc gcactcgata aatcaaaaca
     7021 agaccactgc ggtcgcaggc actacatccc ctatcgtgcc ttcgcactga gccggcctga
     7081 aaacgattgc gtttctttgc ggcgaaacaa cgtacgatcc tgacaaccgc atacgccatc
     7141 tgcaaagcgt gaaggtgcca gttgtgatca aggaagtgcg gaaagttccc gcgcggctca
     7201 gcgcaattca ccaccgaaac ccgattcaga tcgagaatat gcgcttatcc tctttcgtcg
     7261 ctttcatatt cgacatcgac ggaaccttgg tcgattccaa tgaattgcac atcgattcgt
     7321 gggaccgggc attccggcga ttcggcaaac aatttcctcg cgaacaattg cgcgcgcaga
     7381 tcggcaaagg gtccgatcaa tatttacccg aatttctcac gcccgaggag atcaaacgtt
     7441 tcggcaaaga gttggatgaa tacc
//
LOCUS       DATDAJ010000059         2896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_339279, whole genome shotgun sequence.
ACCESSION   DATDAJ010000059 DATDAJ010000000
VERSION     DATDAJ010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339279"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..797
                     /locus_tag="VIS53_01400"
     CDS             <1..797
                     /locus_tag="VIS53_01400"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEY5766467.1"
                     /translation="DTRVGVDYAGTVEAVGKSVTNFKLGDEVFGGRNGALAQYICPRA
                     DRAIALKPANITFEQAGSVGIAGITALQGLRDKGHVQAGQKVLINGASGGVGTFAVQI
                     AKSLGAEVTGVCSTRNVDLVRSLGADHVIDYTKEDFTKGDQRYDVIFDNVQNHTFSER
                     RRVLTPNGICVLVGLGGAGWRGDTRTHLIRSFTTPLMSKFTSQKFGFFVAQLNHQDLA
                     LLADLMQSGKVTPVIDRTYKSLGEVRDALGYLEEGHARGKVVIDVE"
     gene            845..2839
                     /locus_tag="VIS53_01405"
     CDS             845..2839
                     /locus_tag="VIS53_01405"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766468.1"
                     /translation="MSGFFEELRRRKVYRVAAAYIIAAGFIIQIASAVSPAWELPTWT
                     FRLLVTLLLIGFPAALFLAWAFDVTPQGIQATKAPAAETNVRRNMIILIATGVIVSAA
                     AGFFLLPRASAGKIDKSIAVLPFENLSDEKENAYFADGIQNDILTNLSKIGDLKVISR
                     TSVMPYRGSATRNARDIGKALGVATLLEGSVRRIGNRVRVNVQLIDANNDEHIWAEDY
                     DRDLTDVFGIQADLAHKIASALRAKLSPNEKARLVRQPTQNAEAYLLFVQAHDYASRR
                     DMFRDTSLKPEPLFEQAIKLDPNFALAFAGLSMVESWAYHSFDPTPARREKARLNANE
                     ALRLQPELPEGHLALGFSYYYGDRDYERALTEFDIARRGLPNESQAYLAIGAIQRRQG
                     KWAESTANLEKAAALDPKNEHTLMNLAYSYMAQRDFETADKTVDRILATSPQSFQARG
                     VKGYVALQRNGDLSVAEKVFSSIPPNTDPGIMTMVRFWVLRLQRKFPDALEVVQQFRG
                     ETLFNTTTAPCPKAFLEGELYLLLGDEAKARIALEHARVVSDELVRAAPEDATRRGQH
                     GLILAALGQKQEAIAEGKRAVDLLPESQDAFDGPQVTATLARIYAWSGEFDEAFSLLD
                     HLLVVPNGLTVPMLKVDPAWDPLRKDPRFQAWIDKYSPKT"
BASE COUNT          664 a          810 c          788 g          634 t
ORIGIN      
        1 aggacacgcg ggtaggcgta gattacgcgg gaaccgttga ggcagttggc aaaagcgtta
       61 ccaacttcaa acttggcgac gaagtgttcg gtggacgcaa tggcgcgttg gcgcagtata
      121 tttgcccgcg cgccgaccgg gccattgcac tgaagcccgc caacatcaca ttcgaacaag
      181 caggatctgt cggcatcgca ggaatcactg cattgcaggg tctgcgcgac aagggacacg
      241 ttcaggcagg acagaaagta ttgatcaacg gcgcgtccgg cggcgttggt accttcgcgg
      301 tgcaaattgc aaaatccctt ggcgcagagg tgactggcgt ctgcagcacg cgaaatgtgg
      361 atctagtccg atcactcggg gcggatcacg tgatcgatta cacaaaggaa gatttcacaa
      421 agggcgatca gcgttacgac gtgattttcg acaacgtgca gaaccacacc ttttccgaac
      481 ggcgtcgtgt tttaactcca aatggcatct gcgtcctcgt cggcctcggt ggagcaggct
      541 ggcgcggaga cactcggacg catttgatcc ggtcgtttac aacgcctctc atgtcgaagt
      601 tcacgagtca aaagttcggt ttcttcgtcg cgcaactcaa ccatcaggat ctggcgttgc
      661 tcgcggatct tatgcaatca ggaaaagtta cgcccgtgat cgacaggact tacaagtccc
      721 tgggcgaggt gagggacgct cttgggtatc tcgaagaagg gcacgctcgc gggaaagtag
      781 tcatcgatgt ggagtaacgg actgagttat gatcgcgatc cgcgatgcag agagattcca
      841 ttttatgagc ggttttttcg aggagttgcg gcgtcgaaaa gtctatcgag tggcggccgc
      901 ctacatcatt gccgcaggat tcatcattca gatcgcatcg gcagtttccc cggcatggga
      961 attaccgact tggacatttc gtttgctggt gacgctctta ttgatcggct ttccggcagc
     1021 attatttctc gcttgggcgt tcgacgtcac gccgcaaggg attcaagcga caaaggcacc
     1081 tgccgccgaa acgaatgttc ggcgcaatat gatcattctt attgcaaccg gtgtgatcgt
     1141 ctcggccgcc gccggtttct tcctcttgcc acgcgcttcc gccggcaaga tcgataagtc
     1201 gatcgcggtg ttgccgttcg aaaatctgag cgatgagaaa gaaaacgcct acttcgctga
     1261 cggaattcag aatgatattt tgaccaacct ttcgaaaatc ggcgatttga aggtgatttc
     1321 gcggacctcg gtcatgccat atcgcggcag cgcgacgcga aacgcccgcg atattggcaa
     1381 agcacttggc gtggccacgc ttttggaagg cagcgttcgc cgcatcggca atcgggtgcg
     1441 cgtgaacgtg cagctgatcg atgccaacaa cgatgagcac atttgggcgg aagattacga
     1501 ccgcgatttg actgacgttt tcggcattca agccgatctt gcgcacaaga tcgcctccgc
     1561 tcttcgggca aaactttcgc caaacgaaaa agcgcgcctc gttcgccagc caacccaaaa
     1621 tgcggaagcc tatctcctct ttgtccaggc acacgattat gccagtcgga gggacatgtt
     1681 ccgagacacg tccttgaagc ctgagccgct tttcgaacaa gccatcaagc tcgatccaaa
     1741 ctttgccctg gcctttgctg gtctttccat ggtggagagc tgggcttatc acagcttcga
     1801 tccaacaccc gcccgccgag aaaaagcgcg cctcaacgca aatgaggcct tgcggttgca
     1861 accggaactt cccgaaggcc acctcgcgct cggtttctct tattattatg gggatcgcga
     1921 ttacgaacgc gctctcaccg agtttgacat cgccagacgc gggctgccaa acgagtccca
     1981 ggcctatctg gccatcggcg ccattcagcg gcgtcagggc aagtgggcgg aatcaactgc
     2041 gaatttggaa aaagccgccg cgctcgatcc gaaaaacgag cacaccctga tgaaccttgc
     2101 ttacagttac atggcccagc gggatttcga aaccgccgac aagaccgttg atcgcattct
     2161 cgcgacgtcg ccgcaatcat ttcaggcgcg tggggtgaag ggatacgtcg cgctccaacg
     2221 gaacggcgat cttagcgtgg ccgaaaaagt attttcttca atcccgccta acaccgatcc
     2281 gggtataatg acaatggtcc gattttgggt cctgagacta cagcggaagt ttcccgacgc
     2341 acttgaggtc gtgcaacaat ttcgcggcga aacattgttt aacacgacca ccgccccttg
     2401 cccgaaagcc ttcttggaag gcgagctgta cctgctttta ggcgatgaag ccaaagctcg
     2461 aatcgctctc gaacacgccc gcgttgtctc agacgagctg gtgcgcgcag cacctgaaga
     2521 cgcaactcga cgtgggcagc acggtcttat ccttgcggcc ttgggtcaaa agcaggaagc
     2581 catcgccgaa ggaaagcgcg cagtcgactt gttacccgaa tcccaagacg cctttgatgg
     2641 gccacaagtc accgctacac tcgctcggat ttatgcctgg tccggggaat tcgacgaagc
     2701 attttcactt ctcgatcatt tgctcgttgt cccaaacggc ctaaccgtcc caatgctcaa
     2761 agtcgatcca gcctgggatc ccctgcgcaa agatccgcgc tttcaagctt ggatcgacaa
     2821 gtacagccca aagacctagc tccacggttt aacccgctcg gttggaactt attaatcgtc
     2881 atacgatcag ttagtc
//
LOCUS       DATDAJ010000060         9488 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_342885, whole genome shotgun sequence.
ACCESSION   DATDAJ010000060 DATDAJ010000000
VERSION     DATDAJ010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9488
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342885"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            477..1106
                     /locus_tag="VIS53_01410"
     CDS             477..1106
                     /locus_tag="VIS53_01410"
                     /inference="COORDINATES: protein motif:HMM:NF013695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEY5766469.1"
                     /translation="MSSTIPAHVDLRESDMRKGRRLEYFTLGWNLTEAVVGIGAGVIA
                     GSIALVGFGVDSIIESFSGASLLWRLQSHETGEKREQLALKLVGISFFVLATYVAIDA
                     AKTLVQREPPHASIVGISLAAVSIVVMPLLARAKRRVAVRLNSRALVADSRQTDLCAY
                     LSGILFVGLALNALFGWWWADSIAAILMVPIITREGIEALKGDACDGCR"
     gene            1616..2161
                     /locus_tag="VIS53_01415"
     CDS             1616..2161
                     /locus_tag="VIS53_01415"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5766470.1"
                     /translation="MITKLLQIGAIGLMLCAANAWAGPASIQGTVTDAKGQPIKGSDE
                     SVDGKQLFKTVKTDARGRYVSQGLQLRVYRVTLLVNGAVKACITNIKTKQDQATELNF
                     DLKRLAAAQGTTERKKGHHVVWVGARTGSHLGGNWVEVDEYGQAASDSNIHAATGDDL
                     RRQQLTQQPGSVPGQGPTPPP"
     gene            complement(2397..3446)
                     /locus_tag="VIS53_01420"
     CDS             complement(2397..3446)
                     /locus_tag="VIS53_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY5766471.1"
                     /translation="MRCIWRGSKWLEGTLLAVQDHEPIRGDYLIFRFSIFSRVGVSGL
                     IAVIVVWSASLDLRARDQSRDWIVLKDCRLIPNPANDGDSFHVSAGEKEYLFRLYLVD
                     APETDEMTPRRLIEQAKYFSITVPQAIEVGRAAKDFTQEKLSQPFTVFTHMSDAMGQS
                     RLERFYAFIETKEGDLGEQLVRNGLARSYGFKTAPPGVTTSRIEVEKLQQFEDEAKRD
                     KLGAWGINAGRLNAHAQTPSAFSSFVAHGKSWSHLPPAVSPTFFSPVAKPAASITRSS
                     RVETTESHAKEKIPLGNIDINTATEKELTTVPGIGHVMAARIIAARPFRSADDLKRVS
                     GIGGKKYAQIRPYFQ"
     gene            complement(3412..4059)
                     /locus_tag="VIS53_01425"
     CDS             complement(3412..4059)
                     /locus_tag="VIS53_01425"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY5766472.1"
                     /translation="MTTNEEYRNLLRHSLIVTGSCILAVVICYFWVDRSVAFFVYNHH
                     INRIEVFRWLTYPPPEVQNWSALVLTILIVRRAWGPFLRWQKVLLVACISLTVADTFR
                     ISLGDVFGRYWPQTWTHDNPSLIGTGAYGFHPFQRGDDVGSFPSGHACRILGFAGVWM
                     IAMPGSRVIAMVLSVPMLLSLVLMNYHFVSDVIAGSLLGALIATYAVHLARLKMA"
     gene            complement(4056..4976)
                     /locus_tag="VIS53_01430"
     CDS             complement(4056..4976)
                     /locus_tag="VIS53_01430"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEY5766473.1"
                     /translation="MSVLIVGSIAIDTVKTPVEEHSELLGGSASYAALAASFFSPVRL
                     VGIVGNDFPKSEFDFWRSRKIDTEGVQRVNGKTFRWSGEYSWDLNTRQTRSIDLNVFQ
                     DFKPELPETYSQTDFVLLANIAPSLQTHVLEQMERPRFVVADTMDLWIETARSDLDAL
                     LRRVDLLILNDSEAREMTKETSLIKAGRRIQKMGPAHVAIKKGEHGALLFGEGEQFFS
                     CGAYPLEDIHDPTGAGDTFAGGMAGYLAGTVKKVHFNDLRKAMIYGSVLASFCVEAFS
                     LERLRHLSMEEIAKRYEMFKLMSQFEVPAE"
     gene            complement(5081..5704)
                     /gene="thiE"
                     /locus_tag="VIS53_01435"
     CDS             complement(5081..5704)
                     /gene="thiE"
                     /locus_tag="VIS53_01435"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY5766474.1"
                     /translation="MRPLHDCRLYGIIDLGYVERGDAARIVEQMIEGGVDLIQLRGKN
                     KSIGELVDLAAELHELAAKSSTPLIVNDHAEIAPLVPVEGVHVGQDDDPIEIVRQKAA
                     RDILIGKSTHSLEQARAARAEGADYIGFGPIFATPTKPDYAPIGLENIRLVHTEVNLP
                     IFCIGGINIDNLQSVIDAGAKRVVMVSALLKAHNIVDYARCATDMLA"
     gene            complement(5780..7165)
                     /gene="accC"
                     /locus_tag="VIS53_01440"
     CDS             complement(5780..7165)
                     /gene="accC"
                     /locus_tag="VIS53_01440"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY5766475.1"
                     /translation="MFQKVLIANRGEIALRVIRACKELGVRTLAVYSEADVDSLHVQL
                     ADEAICIGAAPSLESYLKIDRIMSAAEIGDVDAIHPGYGFLAENPHFVEVCESCNIKF
                     IGPSSRAMQAMGDKNAARAAARKAGIPVTPGSDGIVETEEDAMKIAKKLGYPVMIKAA
                     GGGGGRGMRAAHNEPSLKSAFHSARHEAQKAFGNDEVYLEKLILNPRHIEFQIMADSH
                     GHIIHLGERDCSIQRRNQKVIEECPSAVMTPSLRRKMGNAAVKLAKSVGYENAGTIEF
                     LLDRDKHFYFMEMNTRIQVEHTVTEEVYGCDLVKEQIRIAAGHPLSPHVARAEPRLHA
                     IQCRINAEDAANNFQATPGRIDFYYAPGGRGVRIDSHVYTGYTVPPYYDSLIAKIITV
                     GSTRINAIDRMRRALDEYYITGIKTTVPFHAAMMRNGDFRDGNYDTGLIDRLVSAGKL
                     NLSTRPIRLHE"
     gene            complement(7219..7746)
                     /gene="accB"
                     /locus_tag="VIS53_01445"
     CDS             complement(7219..7746)
                     /gene="accB"
                     /locus_tag="VIS53_01445"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEY5766476.1"
                     /translation="MLDLANKTVLPKRLSLNQELALDSKDIKEIKAIIDLMKKHDLAV
                     FEIEKEGFRLKLQRGASASQPATAAAAAPGAPAKGAVAAAEPPPPAAKAIESVPMKEI
                     VSPMVGTFYRAASPDAPAFVEVGKPVTEDTVVCIIEAMKVMNEIKAETSGVIAEVLAD
                     NGKPVQFGQALFRVR"
     gene            7848..8588
                     /locus_tag="VIS53_01450"
     CDS             7848..8588
                     /locus_tag="VIS53_01450"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEY5766477.1"
                     /translation="MVDETDDYVVVNKPPFLLIHPTKPNGAPTLWKQLCELLAFEIAS
                     GGQVSIVNRLDRETSGLVLVAKTAAAAREFGLLMQRHSLRKEYLAIVWGWPEWEYKLV
                     DAPVDRQGKHQDSVIWLKQMIHAAGAAAQTEFFVERRFRRSTSSGDRFSVIRAIPRTG
                     RTHQIRVHLASIGHPIVGDKIYGPDEQLYLRFIETGWTHELEQRLLLPRHALHSAKLV
                     TEDHREWTSVLPLDLAEFSSGDREIALP"
     gene            8660..9271
                     /locus_tag="VIS53_01455"
     CDS             8660..9271
                     /locus_tag="VIS53_01455"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HEY5766478.1"
                     /translation="MKYARTCTVLLFLSVCFRLFGGTSETQVESVRSDFDPQRFEFAI
                     ESAYLLGAINAPVGYEIGAEFLTGRIRWGVIDGDTWLRGYHQFYVSAMGEPIFRGIEN
                     YYFGFNLGFRYNFVPRGSRFAPYISGGVGGGWIDSHANIPGAQGQDFTFNILSAAGIS
                     YMVNDHWKLEVGALYQHLSNGGQTDPNPSLNLFGPQVGVTYSF"
BASE COUNT         2113 a         2618 c         2532 g         2225 t
ORIGIN      
        1 aagaaatcag caccaagcgc cccgatagcc atgaacctgt gtccgcgaca acatagcgga
       61 tagcccattg ctgatcatta aaatagaagt cctccacatg gccgatgtcg ccgtcagagg
      121 cgcggagctt ttttctgtaa agctgcctaa ggcttagcaa cataacttta gcctttctga
      181 agacgggttt gatctatccg aaccatgcga ccagatactt gaattcgcaa gcgccggaca
      241 cgcgcagtgt tctatgtacc tttacggagt ccggccacgc aacgattatt cgcggcgtcg
      301 atctaatttc cgatgtgctg tccattcggc cgcctgtggt acggtgagcc aaacgcaatc
      361 ggcaatgcag tcgagtacgc aaggttttac ggccgctcac atgatgctgt gattcgcgtc
      421 tacgatgaat cgggcaacgt gattgaaatc caagggcaca tcggcgatgt caaagtatgt
      481 catcgacgat tcctgcacac gttgatctgc gcgaaagcga catgcgcaaa ggtcgtcgcc
      541 ttgagtattt cacgcttggc tggaatctca ccgaagcagt tgttggtatc ggtgcgggtg
      601 tcatagctgg cagcatcgcg ctcgttggtt tcggcgtgga ttcgattatt gaaagttttt
      661 ccggtgcgag cctgctgtgg cgattgcaat cgcacgagac aggcgaaaag cgcgagcagc
      721 ttgctcttaa gcttgtcggc ataagttttt ttgtgctggc gacctatgtc gcgattgatg
      781 ccgccaagac gctggttcag cgagaaccac cgcacgcgag catcgtgggt atcagccttg
      841 cggcggtctc gattgttgtt atgccgcttc tcgctcgggc aaagcgccgt gtagcggttc
      901 gattgaatag ccgtgcgctt gtggcggact cacgccagac ggatctttgc gcttatttgt
      961 caggcatcct gtttgtcggc cttgctctca acgcgctttt tggatggtgg tgggcggatt
     1021 caatagccgc aattctcatg gttccgatca tcacgcgtga gggcatcgaa gcgttgaagg
     1081 gcgatgcctg tgacggttgc cgctagtcca atgcacctcc gcgcaaggac cgccgcggcg
     1141 tcgatctaat ttccgatgcg ctgccgttcg gtcggctctg agtcattttg aggccaatcg
     1201 gaattcagac ccgaaaacgg atccagtcat gtttggagtt tgggagaaat cgtgcgcctg
     1261 ctacagtgat cgctctgaag catgacacgc attcgctccc tacggagcat tatcggaagg
     1321 gcaaatgtgc gatctgtctg cgaaagattc gagtaatcag actggacgaa actcgcagcc
     1381 gcgttgccgt gcacggccaa aaatataagc cttttcttca atgtccgggt tcaggcatgc
     1441 catttaagta gcggtccgat ttactaccca gccgccggaa ggctttgagc attgcctttg
     1501 cgagcgcttt tcggtcagca aaagtccact cgcggaaact tcgctttctc cctcgttcag
     1561 caaattattt gggaacttcg gctcctgttt cctgtaggaa cctagtgagg ttgatatgat
     1621 tacaaaattg ctacagatag gggctattgg gctgatgctt tgtgctgcga acgcctgggc
     1681 tggaccagcg agcattcaag ggactgttac ggacgcaaag ggacaaccga ttaaaggctc
     1741 ggatgaatcg gtagacggta agcagctctt caaaaccgta aaaactgatg cgagaggtcg
     1801 ctatgtttca caggggctgc agctaagagt ttaccgggta acgttgttgg tgaatggcgc
     1861 agtcaaagcg tgtattacca acataaaaac caagcaagat caagctactg aactcaactt
     1921 cgatctgaaa cggctggcgg cggcccaagg aaccaccgag cgaaagaaag gacatcatgt
     1981 cgtttgggtg ggggctcgta ccggaagcca cctcggtggt aactgggtcg aagttgacga
     2041 gtatgggcag gccgcgtccg attccaacat ccacgcagcc actggtgacg atctacgccg
     2101 ccaacaactg acccaacagc caggttcagt tccagggcag ggaccgacgc cccccccttg
     2161 acgcctccgc catcggacta gctaagtttc gatttctttt tcaaagtcct tccacagcgc
     2221 gtctccgcga gcccgcaatc gtcggcagaa ttcctaaact cctcaaaaat ttcgttcacg
     2281 acctcaaagg tcagaacgcg gttcacgttt cctttcaacg tcgcggccgt aatccgaaat
     2341 acgtgctcgt aaagaaaatg aaccgcatcg cgctctttgc tcgtgatcga aaccgatcac
     2401 tgaaaatacg gccggatctg cgcgtatttc tttccgccaa tgccgctcac tcgcttcaga
     2461 tcatcagcgc ttcggaacgg tcgcgcggcg ataatccgcg ccgccataac gtgcccaatt
     2521 ccgggcacgg ttgttagctc tttttctgtc gcggtgttga tgtcgatgtt cccgagcgga
     2581 atcttttcct tcgcgtgcga ttcagtcgtc tcgactcgac tgctgcgcgt aatcgacgcc
     2641 gctggtttcg caactggtga aaaaaaggta ggcgaaaccg caggtggcag gtgtgaccaa
     2701 ctctttccat gagcaacaaa agaactgaaa gccgatggcg tttgtgcatg cgcgttcaat
     2761 cgtcccgcgt tgatgcccca ggccccaagt ttgtcccgtt ttgcttcgtc ctcgaattgc
     2821 tgaagctttt cgacttcgat tcgcgaagtt gttactcccg gcggcgccgt cttgaagccg
     2881 taagagcgag caaggccatt gcgcaccagt tgctcgccca gatcaccttc tttggtttca
     2941 atgaatgcat agaaacgctc cagtcggctc tgacccatcg catcggacat atgcgtgaat
     3001 acggtaaacg gttgggacag cttctcctgc gtaaaatctt tcgccgcgcg acctacttcg
     3061 atggcctgcg gcaccgtaat actaaaatat ttcgcctgtt caatgagccg tcgcggcgtc
     3121 atttcgtctg tttcgggcgc gtcaacgaga taaagacgaa acaggtattc cttctcgccg
     3181 gcactcacat gaaagctgtc gccgtcattc gccggattcg ggatgagtcg gcaatctttc
     3241 aacacaatcc aatctcttga ttgatcgcgt gcgcgaagat cgagagacgc gctccaaaca
     3301 acaataaccg caatgagccc gcttacaccg actcgggaga agatcgaaaa acgaaagatc
     3361 aaatagtcac ctcgaattgg ctcatgatct tgaacagcta gtagcgttcc ctcaagccat
     3421 tttgagccgc gccaaatgca ccgcatatgt ggcgatcagc gcccctaaca agctgccggc
     3481 gatgacgtca ctcacaaagt gataattcat cagcacgaga ctcaggagca tgggaacaga
     3541 aagaaccatc gctatcactc gactgccggg catcgcaatc atccatactc cggcaaatcc
     3601 caggattcgg caggcatgac ctgacggaaa actgccgacg tcgtcgcctc gctgaaacgg
     3661 atggaacccg tatgcgccgg taccgatcag cgagggattg tcatgcgtcc aggtctgcgg
     3721 ccaatagcgg ccgaaaacgt cgcctaacga gatgcggaaa gtatcggcaa cggtcaggct
     3781 gatacacgcg acgagaagca ccttctgcca tcgcagaaat ggtccccacg cccggcgaac
     3841 gatcaagatt gtcaaaacaa gagccgacca gttctgcact tcgggcggcg gatacgtgag
     3901 ccagcgaaag acctcgatcc tgttgatatg atggttgtaa acaaagaagg ccacgctgcg
     3961 atcaacccag aagtaacaga tgacaaccgc aagaatgcac gaaccggtta cgatcaagct
     4021 atgccgcagc agattacgat actcctcatt cgtggtcatt ctgccggcac ttcgaattgg
     4081 ctcatcagtt tgaacatctc gtagcgcttt gcgatttcct ccatcgagag gtggcgcaaa
     4141 cgctccagac taaatgcttc tacgcagaaa ctggcgagca cacttccgta gatcattgcc
     4201 ttgcgcagat cgttgaagtg cacctttttc acagtgccgg ccaggtaccc ggccatgccg
     4261 cccgcgaacg tgtcccctgc ccccgtcgga tcgtggatgt cttctagtgg gtatgcacca
     4321 caactgaaga actgttcgcc ttcgccaaag agcaatgcgc cgtgctcacc tttcttaatg
     4381 gcaacgtggg ccggccccat tttctgaata cgacgaccgg ccttgatgag gctcgtttcc
     4441 ttggtcattt ctcgcgcttc gctgtcgttc aggatcaaaa gatcaacgcg ccgaagcagc
     4501 gcatcgagat ccgatcttgc tgtctcgatc caaaggtcca tggtatcggc gacaacgaaa
     4561 cgcggacgct ccatttgctc gagcacatgc gtttgcagtg acggcgcgat attggccagc
     4621 agaacgaaat ctgtctggct ataggtctcc ggtaactccg gcttgaaatc ttggaaaacg
     4681 ttgagatcga tggagcgcgt ctggcgcgta ttcaggtccc atgaatattc gcctgaccag
     4741 cggaacgttt ttccattcac tcgctgcacg ccttcagtat caatcttgcg cgatctccaa
     4801 aaatcgaatt ccgatttcgg aaaatcattg ccgacgatgc cgacgagccg aaccggcgaa
     4861 aagaaacttg ccgcaagtgc ggcgtaagaa gccgagccgc ctaacaattc cgagtgttcc
     4921 tccaccggag tcttaaccgt gtcgattgca atggatccca caatgagaac agacatgatc
     4981 agaatgacga atgcctccgt cccgttgaat cgttgaatcg ttgaatcgta atccgatgta
     5041 acgatgtaac catgtaacga attacggtga tcgtgatcat ctacgccagc atatctgtgg
     5101 cgcagcgtgc gtaatcaaca atgttgtgcg ccttgagtaa cgctgaaacc atgacaacgc
     5161 gttttgcgcc ggcgtcaatc acgctctgca gattgtcgat attgatgccg ccgatacaga
     5221 aaatcggcag gttcacttct gtatgaacga gtctgatatt ttcaagacca atcggcgcgt
     5281 aatcaggttt tgtcggagtc gcgaagatcg ggccgaagcc gatgtagtcc gcaccttcgg
     5341 ctcgagcggc acgcgcttgc tccaggctgt gcgtagattt tccgatcaaa atgtcgcggg
     5401 ccgctttctg tcgcacgatc tcgatggggt catcatcctg gccgacgtgc acgccttcga
     5461 ccgggacgag cggagcgatt tcagcgtgat cattcacgat cagcggcgtg gaagatttcg
     5521 ctgctaattc atgtaactca gctgcgagat ccaccagttc gccgattgac ttgttttttc
     5581 cgcggagctg aatcagatcg acgccgccct cgatcatttg ctccacaatg cgagcagcat
     5641 cgcctcgttc cacgtagccg aggtcaatga tcccgtagag acgacaatca tgtagtggcc
     5701 tcatctgctc aagaagccac ggcttcccac ccgtcgcgtt tgtcctcgac ggctcgaaag
     5761 ccatcgttcc ttggcgactt cactcatgca aacgaatggg ccgtgtgctc aagttgagct
     5821 tgcctgctga aacaaggcgg tcgatcaaac cagtgtcgta gtttccgtcg cggaaatcgc
     5881 cgttcctcat catggcggcg tgaaacggca cggtagtctt aatgccggtg atgtagtact
     5941 cgtccagagc gcggcgcatt cgatcgatgg cattgatccg tgtggagcca accgtaatta
     6001 ttttcgcaat cagcgaatcg taatatggcg gcacggtgta gccggtataa acgtgcgagt
     6061 cgatgcgaac gccgcggcca cctggtgcat aataaaaatc gatgcggccc ggcgttgcct
     6121 gaaagttgtt ggccgcatct tcggcattga tacggcattg gatcgcgtga agccgcggtt
     6181 ccgcacgcgc gacgtgcggc gaaagcgggt ggcccgcggc gatgcgtatc tgctccttga
     6241 cgaggtcgca tccataaact tcctctgtga cggtgtgctc cacctggatg cgtgtgttca
     6301 tttccatgaa gtaaaaatgc ttgtcgcggt cgagcagaaa ttcaatcgtt cccgcgttct
     6361 cgtacccgac tgacttggcc aatttcacgg cagcattgcc cattttcctt cgaagactcg
     6421 gcgtcattac cgccgacgga cattcttcaa tcactttttg gttacgccgt tgaattgagc
     6481 aatcacgttc accaagatga atgatgtggc catggctgtc ggccatgatt tgaaattcga
     6541 tgtggcgcgg gttgaggatg agcttttcca gatacacctc atcgtttcca aatgctttct
     6601 gcgcctcatg acgcgcgcta tggaaagcgg atttaaggct gggctcatta tgcgcggcgc
     6661 gcattccgcg gccgccgccg ccgccagccg ccttaatcat caccgggtaa ccaagcttct
     6721 ttgcgatttt catcgcatct tcctccgtct caacgatccc atcgctgccc ggtgttaccg
     6781 gtatgccggc tttgcgcgca gccgcacgag cagcgttctt gtcgcccatc gcttgcatcg
     6841 ctcgcgagga agggccgatg aacttgatat tgcagctttc gcagacttcc acgaaatgcg
     6901 ggttctcagc gaggaaccca tagccgggat gaatcgcgtc cacatccccg atctcggctg
     6961 cgctcatgat ccgatcgatt tttaaataac tctcaaggct gggcgcggca ccgatgcaga
     7021 tcgcttcgtc ggcgagttgg acgtgcagcg aatcgacgtc tgcttccgaa tagactgcga
     7081 gggtgcgaac accgagttcc ttacaggcgc gaattacccg tagcgcgatc tctccgcgat
     7141 tagcaatcag aactttctgg aacatgtgga acgcgcgatt cggcgcgccc ggcggtcgcg
     7201 ccccctgctg tgtttctgtt aacgcactct gaagagcgcc tggccaaatt ggaccggctt
     7261 accgttgtcc gcgagcactt cggcgataac gccgctggtc tcggccttaa tctcgttcat
     7321 cactttcatc gcttcgatga tgcaaacgac ggtatcttcg gtgacaggtt tccccacttc
     7381 aacaaaagcg ggcgcgtcgg gcgatgcagc gcggtaaaat gtacccacca tcggcgaaac
     7441 gatctctttc atcggaacgc tttcgatcgc tttcgcagca ggcggcggcg gttcggctgc
     7501 tgcgaccgcg cctttcgccg gagcgccagg cgcagccgct gcagctgtcg ccggttgcga
     7561 agcagaagcg cctctctgca gcttcagacg gaagccctcc ttttcgatct cgaacacagc
     7621 gagatcgtgc tttttcatca gatcgatgat cgcttttatt tctttgatgt ctttggagtc
     7681 caaggccagc tcctggttaa ggctgaggcg tttaggtaaa acagttttgt tagccaggtc
     7741 aagcacagga atcgacggtt cgattgcggg attgaccgag tattagcctt tgaactcagg
     7801 catattccct cctccattat tccattactt cactcctccg cttcgaaatc gtagatgaga
     7861 ctgacgacta cgttgtcgtc aataagccgc catttctgct cattcatccc accaagccga
     7921 acggcgcacc gacgctctgg aaacaattgt gcgagctgct cgcattcgag atcgcaagcg
     7981 gcggacaggt ttcaatcgtg aacagactcg atcgcgagac cagcggtctg gtgctggttg
     8041 cgaaaactgc cgcggccgca cgcgagtttg ggcttttgat gcaacggcac tcattgcgca
     8101 aagaatatct cgcgatcgtt tggggctggc ctgaatggga atacaagctc gttgacgctc
     8161 cggtagatcg tcagggcaaa caccaagact ctgtgatctg gctcaaacaa atgattcacg
     8221 ccgcgggcgc agcggcacag acggaatttt ttgttgagcg gcggttcaga agatcgacgt
     8281 cgtcgggcga ccggttcagc gtcattcgcg cgattccgcg caccggacgc actcatcaga
     8341 ttcgggtgca tctcgcctca atcggccacc caatcgtagg tgataaaatc tatggccccg
     8401 acgagcagtt gtacctgcgt ttcatcgaaa ctggatggac tcatgagctc gagcagagac
     8461 tcctgttgcc acgacatgct ttgcactcgg cgaaactagt caccgaggac caccgagaat
     8521 ggaccagtgt gctccctctt gatcttgccg aattctctag cggcgatcgg gagatcgccc
     8581 ttccttgact tcgacgctga ggggatcgcg gctacaggaa aattgcaatt cgatcaagcg
     8641 ttcctatcgt agcgcgcgaa tgaaatacgc tcgtacatgc actgtcttgt tgtttctcag
     8701 cgtttgcttc cggctcttcg gcggcacatc ggaaacccaa gttgaatccg tgcgtagcga
     8761 ctttgatccc cagcgattcg aattcgcaat tgagtccgcc tatttgttag gcgcgatcaa
     8821 cgcccctgtc ggctacgaaa tcggagctga attcctgacc ggccggattc gttggggagt
     8881 gatagacggc gacacgtggc tgcgcggtta ccatcaattt tacgtgagcg ccatgggaga
     8941 gccgatcttt cgcggcattg agaactacta tttcggattc aatctcggct ttcgctacaa
     9001 tttcgtgcca aggggcagcc ggttcgctcc ctatatttct ggcggagtag gtggaggttg
     9061 gatcgatagc cacgcaaata ttcccggcgc ccaggggcag gatttcacgt tcaacatttt
     9121 atcggcggct ggtatttcct acatggtgaa cgatcactgg aaactggagg tcggcgcgct
     9181 ttaccagcat ctgtccaacg gcggacaaac agatcctaat cccagtctca acctgtttgg
     9241 cccgcaggtg ggcgtcacgt attcgttttg acatgccttt gtcatgttga gcggaccgaa
     9301 acatctctgg acagtgctgg ggcgcgggac aaacaaatga ttagagattc ttctcccgcg
     9361 actgcgggat cagaatgaca atgacgatga aggtgactga ggaaaacgtg ctcgtcgtca
     9421 ggcgcagctt gttcgacgaa cttggggctt ttcacggcct caatttccag ccgcaaaaat
     9481 atctcgat
//
LOCUS       DATDAJ010000061         7736 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_346151, whole genome shotgun sequence.
ACCESSION   DATDAJ010000061 DATDAJ010000000
VERSION     DATDAJ010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7736
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346151"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1766
                     /locus_tag="VIS53_01460"
     CDS             <1..1766
                     /locus_tag="VIS53_01460"
                     /inference="COORDINATES: protein motif:HMM:NF013311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="topoisomerase C-terminal repeat-containing
                     protein"
                     /protein_id="HEY5766479.1"
                     /translation="STLGKLENPFARRVLDNNWVKPNKRIFNNAKVGDHFAIIPTDIV
                     PHSLDNNERAVFDMVTKRFVAVFFPPAQYENTTRITRVEGEPFKTEGKIMVASGWLEV
                     YGRETAGDKPEENLPAVQQGERIETVRIEINTEQTRPPVRYNEGTILSAMEGAGKLVD
                     DEELRDAMKEKGLGTPATRASIIETLISAHYLTRHGKELQPTAKAIQTITLLKSAVPE
                     LTSPELTGEWEFRLREIEHRKLTRDAFMRDIRDLTKDIVGKAKHFHPDEHMPDTEPFG
                     RCPKCGSPIVERFKSFTCTNQDCDFTIWKTIAGRLLSRDEFETLVRDKQTGPLGGFRS
                     KKGKRFHAALKLSDDFKAEFDFGPNGQENGAAQPVDFSRQEPLGTCPKCGGRVFESGM
                     TYVCENSVGPNKTCDFRSGKVILQRPIEREQMNKLLASGKTDLLERFISRKGRPFKAF
                     LVLNDKKDVGFEFEKRDPKAKKERKPKEPVAKIDFTGKEPLGECPISGGKIFETETSY
                     ICQDSQADRKPCKFKLSKTILGREISKEQAQKLLTTGKTDLLEGFISKRGRPFSAYLK
                     VEDGKVGFEFPEKTASATESK"
     gene            1830..3671
                     /locus_tag="VIS53_01465"
     CDS             1830..3671
                     /locus_tag="VIS53_01465"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HEY5766480.1"
                     /translation="MQDRWILPPCESLNNSTIAWNEICESECIARLLFRKGFRSTDEV
                     QNFLRPRLSSLSDPFLLPQMRAAVARILAALDSRETIVLFGDYDVDGVTSLALLAEML
                     SGYGATPELFLPLRMEEGYGLSRESVERCLEQYRPQLLIAIDCGTASADEIAELKKRS
                     VDVIVLDHHEPPLRSYGLTGQPSRGCGSAGEPKSRLPDCVAIVNPKIVGEADKPVCLS
                     QASSVSDSRRQDCLRHSPSPFHYLCSVGIVFKLCHALLKTRPLPEFDLKSKLDLVALG
                     TVADIVPLVEENRLLVQRGAIEIGRTSRVGLRTLMQVAGVRPPILPEDIGYRLGPRLN
                     AAGRLTTAEKSLRLLLTNNEDEAAALATELDQQNRARQEVEKEILGAAIVTIEKQFDA
                     ARDAAIVAGARGWHPGVLGIVASRIARKYHRPAIVIGFDENGVGKGSGRSIAGLNLVD
                     ALTRCAATLEKFGGHEMAAGLALHEENFSKFAEAFCSTARELLSEEALQRSLRLDHEL
                     PFTNIDVELLRWHELLQPFGNGNPQPLFFARGVEPVGVPRVSNEKHLIFRLRQGERHR
                     RAVYFDSATDELPPPPWDIAFRIGLDEYGGETLVGMRIEGLRAAEKA"
     gene            3691..6378
                     /locus_tag="VIS53_01470"
     CDS             3691..6378
                     /locus_tag="VIS53_01470"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5766481.1"
                     /translation="MTSVSTNLEDLSWIPRPRLLALRRLGIETTEDLLTHFPRRHEDR
                     TEFPQFPREETDASICLCGEVTKTSLRRFGGWKKIFEATLAESQPNALSEPLVCRWFN
                     LHYVQKMIATGQRIVVFGRPRLRGKRICMDHPEFEVIENDEEISIHFRRITPIYPATE
                     GLSQRVLRGIIYRVLRESPDAGWQLIAPSSLVRGERSGAIQSIHFPTSWEARDTAREH
                     LVLSEFFAMQMLIASRRFESSARAGQAHCGSGALLDKFLKALPFELTAAQGKVISEIR
                     RDLAANNPMNRLLQGDVGSGKTVVAIAAMLLVVEAGYQAAFMAPTQILAEQHYEVLRR
                     WLEPLGVHIALRTAARQEESGPLPLFARNDSGSARVSRAGDGVAPSQTSLEADTPNGP
                     RYFRRRLPHFEKPWAIYAVTIGTKKNRCLSPKARTTVLNSLRHFHKKRYEMFAACVMP
                     DHVHLLIQPWPKGDDDKGNTVFWRLSELLHSIKSFSAHGINEIENKSGSIWEKERFDR
                     YVRSDRDLQEKFHYVLRNPWDSGVAKQNEDYPWVWTQYDEARNERLFRRDAETSTRDA
                     CATQTNEPQIIVGTHALLYESVSFSNLGLAVIDEQHKFGVAQRARLTAREPAPDVLVM
                     TATPIPRTLTMTIYGDLDVSTIDELPRNRGKIVTAVRDTSKLGEVLSFLRTQLDKGRQ
                     LYVIYPLIDESDKLDVKAAAAEYELWRERLHPFRCELLHGRIPAPEKQQIMDRFRRGD
                     TNALISTTVLEVGVDVPNAAVMLIENAERFGLAQLHQLRGRIGRGEHKSYCILLSSSD
                     AKETSAKLAVLERTTNGFEVAEADWELRGPGDVLGKAQSGLPAFKIGDLKRDAELMRR
                     ARAAAMSIFEKDPRLEQPENQHFRRLIVEQQGQSFSHVS"
     gene            6378..>7736
                     /locus_tag="VIS53_01475"
     CDS             6378..>7736
                     /locus_tag="VIS53_01475"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY5766482.1"
                     /translation="MKNLAKFLIFVLLLSAGISLLYDYRLKHGGLKVPSGRAPERYTL
                     AAEPAVNPKQVASLESLNQERRALVNSVVPSVVAVKTSTKLAIRREYGVDPFEFFFPN
                     QRRSRNPRDEALVQNSLGSGVIVTNEGHIITNNHVVTDRQGRPVDQIEVQLSDGRSKK
                     ARLVGADEQVDLAVLKIDEPGVKPLKLADSDRVQPGDFVLAIGNPLGFEETVTDGIIS
                     SKGRPNRSDSFADLLQTNAAINPGNSGGPLINISGEVIGINTAIASTTGGSQGLGFAI
                     PSNTVHMALESLLKQGRIIRGYLGIQTGPLERGASGSDTGGVTVGEVLSGSPAEQAGL
                     QPGDVIRKFDGRDVKNFNTLRTLVAGAPLDRQIELQIVRNGKPLTVKTQIKEQPVNYE
                     SARVLPRGNQPQPQAPQQPNDQETVDSPLASIHVDELTPERARQLDLPPNVQGVLVTD
                     VDP"
BASE COUNT         1851 a         2075 c         2216 g         1594 t
ORIGIN      
        1 aatcgacatt gggcaaactc gaaaatccgt tcgcgcgcag agtcctcgat aacaactggg
       61 tcaagcccaa caagcggatt tttaacaacg cgaaagtcgg cgaccatttc gcaatcattc
      121 cgaccgacat cgtcccgcat tcactcgata acaatgagcg ggcagttttc gacatggtta
      181 cgaagcgttt tgtggccgtg ttctttccac cggcacaata cgagaacacc actcgaatca
      241 cgcgcgtgga aggcgagcct ttcaaaacag aaggaaaaat catggtcgcg tccggatggc
      301 tggaggttta tggacgcgaa actgctggcg acaagccgga ggaaaacctg ccggccgtgc
      361 agcaaggcga acgaatcgaa accgtccgta ttgaaatcaa taccgaacag accaggccgc
      421 ctgttcgtta caacgagggc acgatcctca gtgccatgga aggggcgggc aaactcgtgg
      481 acgatgaaga actgcgcgat gcgatgaagg agaaaggcct cggcacgccc gccacgcgtg
      541 catctatcat cgaaaccctg atttcagctc attatctgac ccggcacgga aaggaacttc
      601 agcccaccgc aaaggctatt caaacgatta cccttctcaa aagcgcggtg ccggaattga
      661 ccagccccga actcaccggc gaatgggaat ttcgcctgcg cgaaatcgag catcgcaagc
      721 taacgcgcga cgcgttcatg cgcgatatcc gcgacctaac gaaggatatc gtgggcaaag
      781 ccaagcattt tcatcctgac gagcacatgc ctgacactga gccctttggc cggtgcccga
      841 agtgcggctc gccgatcgtc gagcgattca aaagtttcac ctgcacgaat caggactgcg
      901 attttacaat ctggaaaact atcgccggtc ggttgctgag ccgcgatgaa ttcgagacgc
      961 tcgtccgcga caaacagacc ggaccgttgg gcggctttcg cagcaagaaa ggcaaacggt
     1021 ttcacgccgc gctcaaattg agcgacgatt tcaaggccga attcgatttc ggaccaaacg
     1081 gacaagagaa cggcgcagcg cagcccgtgg atttttcacg ccaggaacca ctgggaacat
     1141 gtccgaagtg cggcggacgc gtattcgaat ctggaatgac ctacgtgtgc gaaaattcag
     1201 tcggcccgaa caagacgtgt gacttccgat ccggcaaagt cattctgcaa cgaccaatcg
     1261 agcgagaaca gatgaacaaa ttgctcgcga gcggcaaaac agatttgctt gaacgcttca
     1321 tttcccgcaa gggcaggcca ttcaaagcgt ttctcgtgtt gaacgacaag aaagatgtcg
     1381 ggtttgaatt cgagaagcgc gacccgaagg cgaaaaaaga acgaaagccg aaagagccgg
     1441 ttgcgaagat tgatttcaca ggcaaggaac cgctcggcga atgtccaata tctggcggaa
     1501 aaatttttga gactgagacg agttacattt gccaggactc acaggccgat cgaaagcctt
     1561 gcaaattcaa gctcagcaaa acgatcctcg gccgcgagat ttcaaaagaa caggcgcaaa
     1621 agcttctcac taccggaaaa accgatcttc tcgagggctt catctcgaaa cgcggacgac
     1681 ctttctcggc gtatctgaaa gtcgaggacg gaaaagtcgg tttcgaattt cctgaaaaaa
     1741 ccgcgagcgc gacggaatca aaatagtttt ttttgacgcg ctctgcgtcc tcgtcttgtc
     1801 actcaccgcg tcattaataa actgagccgg tgcaggaccg atggattcta ccgccgtgcg
     1861 aaagtctgaa taacagcacg attgcgtgga acgagatttg cgaatcagaa tgcatcgcgc
     1921 gcctgctttt tcggaaaggg tttcggagta cggacgaagt tcaaaatttc ctgcggccgc
     1981 gtcttagctc gctgagcgat ccatttttgc tcccccaaat gcgtgcagca gtcgctcgga
     2041 ttctggctgc gctggattcg cgcgaaacca tcgtgctgtt cggagattac gatgtcgatg
     2101 gagtgacctc cctggctttg ctcgcagaaa tgctaagcgg ttacggcgct acaccggaac
     2161 tctttttgcc tttgcggatg gaagaggggt acgggttgag ccgcgagagc gtcgaacgtt
     2221 gcctcgagca ataccgcccg caattgctga tcgccattga ttgcggcaca gcttcggccg
     2281 acgaaattgc tgaactcaaa aaacgcagcg ttgatgtcat agtgctcgac catcatgagc
     2341 ctccgctcag aagctacggc ctcacaggcc agccttcgcg aggctgcggc tcggcaggcg
     2401 aaccgaaatc acggctgccc gattgcgtcg caatcgtgaa tccgaagatc gttggtgagg
     2461 cagacaaacc tgtctgcctt tctcaagcta gtagcgtatc ggattctcgc aggcaggatt
     2521 gcctgcgcca ctcaccctcg ccatttcatt atctctgcag cgtcgggatt gtattcaagc
     2581 tttgccatgc gctgttgaag acgcggccgc tgcctgagtt tgatttgaaa tcaaaactcg
     2641 atcttgtcgc gctcgggacc gtggctgaca tcgtgccact cgtggaagag aaccgcctac
     2701 tggtgcaacg cggggcgatc gaaatcggcc gcacgtcgcg cgtcggtctc aggaccttaa
     2761 tgcaagtcgc cggagtgcgt ccgcctattt tgcccgaaga cattggctat cgtttgggac
     2821 cacgattgaa cgccgcgggc aggttaacca ccgcggagaa atctttacga ctgttgctta
     2881 cgaataatga agacgaggcg gcggctctgg cgacagagct ggaccaacaa aaccgcgcac
     2941 gccaggaagt ggagaaggaa attctcggtg cagccattgt gacgatcgaa aaacaattcg
     3001 acgcggcgcg tgacgcggcc atcgtggcgg gcgcacgcgg ctggcatccc ggcgtactgg
     3061 gcatcgtagc gtcacggatt gctcgaaaat accatcggcc tgccatcgtg atcggtttcg
     3121 acgagaacgg cgtcgggaag ggcagcggtc ggagcatcgc agggctaaat ctcgtcgacg
     3181 cgcttactcg atgtgcggcg acgctcgaga aattcggcgg ccacgaaatg gcagccggtc
     3241 tggcgttaca tgaggaaaat ttctcgaagt ttgccgaagc gttttgcagt accgcgcgcg
     3301 agttgctttc agaagaagct ctgcaacgct cgctacgatt ggatcacgaa ctgcccttca
     3361 caaacatcga tgtcgaattg ctccgctggc acgaactttt gcagccgttt ggaaatggca
     3421 atccacagcc gcttttcttt gcgcgcggag tcgagcctgt cggggtgccg cgagtctcaa
     3481 acgaaaagca tcttatattt cgattgcgac agggcgaacg gcatcgtcgc gccgtctatt
     3541 tcgacagcgc gacagatgaa ttaccgccac cgccctggga catcgcattc cgcattgggt
     3601 tggatgaata tggcggcgag actttggttg gcatgcggat cgagggcttg cgcgcagctg
     3661 agaaggcttg aaacaccaag ttcgaatggc atgaccagcg tttcgacaaa ccttgaggac
     3721 ttaagctgga tcccgcgccc gcggttactc gcgctgcggc ggctagggat cgagaccacg
     3781 gaagatttgc taacgcattt cccgcggcgt catgaggatc ggaccgagtt cccacagttt
     3841 ccgcgggaag aaaccgacgc ttccatctgt ctctgcgggg aggtgaccaa aacgtcgctg
     3901 cgccggtttg gcggctggaa gaaaattttt gaggcgacgc tggcggaatc gcagccgaat
     3961 gcgctgagtg agccgctcgt atgccgctgg ttcaatctgc attacgtgca gaaaatgatt
     4021 gccacgggtc aacgcatcgt tgttttcggc aggccgcgtc tgcgtggaaa acgaatttgc
     4081 atggatcatc cggagtttga ggtgatcgag aacgatgaag agatatcgat ccattttcgc
     4141 cgcatcacgc caatctaccc tgcgactgaa ggtctttcgc agcgcgtctt gcgcggcatc
     4201 atctatcgtg tcctacgcga gtctccagac gcaggatggc aactgatcgc cccgagcagt
     4261 ttggtacgcg gcgagcgatc gggcgcgatt caatcgatac attttcccac aagttgggaa
     4321 gcgcgcgaca ccgcgcgcga gcatctcgtg ctctcggaat tctttgccat gcaaatgctg
     4381 attgcgtcgc ggcgtttcga atcgtccgct cgagccggtc aggcacattg cggctcaggc
     4441 gcgctgctag acaaatttct aaaagcactt ccgttcgagt taacggctgc gcagggaaaa
     4501 gtgatctcag aaatccggcg cgatctggcg gcgaataatc ccatgaatcg tttgttacag
     4561 ggcgacgtcg gttcgggaaa aactgtcgtc gcgattgcgg cgatgcttct tgtagttgaa
     4621 gcgggatatc aggccgcctt tatggcgccg acgcaaattc tggccgagca acattacgaa
     4681 gtactgcggc gttggctcga gccgctgggc gtccacatcg cattacgaac agcagcaagg
     4741 caggaagaaa gcgggcccct gccgcttttt gcgcgaaatg attcgggtag cgcacgcgtc
     4801 tcgcgtgctg gcgatggcgt cgcgccatcg cagacttctc ttgaagcgga cacaccaaac
     4861 ggccctcggt acttccgccg acgtctccct cacttcgaga agccgtgggc aatttatgct
     4921 gtgactattg gcacaaagaa gaatcgttgc ctttcaccaa aggcgcgcac gactgtttta
     4981 aattcgctgc gtcactttca caaaaaacgt tacgaaatgt tcgctgcatg cgtaatgccc
     5041 gatcatgtgc atttactcat ccagccgtgg ccaaaagggg acgatgacaa aggaaacact
     5101 gtcttttggc ggctgagtga attgctgcat tcaattaaat ctttttcagc gcatggaatt
     5161 aatgaaatcg aaaacaagag cggatcgatt tgggagaagg agcggttcga tcggtatgta
     5221 cgatcggatc gcgatctcca ggagaagttt cactacgtcc tgcgcaatcc gtgggattcc
     5281 ggcgtggcca aacagaatga agactaccca tgggtctgga ctcagtatga cgaagcgcgc
     5341 aatgaaagat tgtttcggcg cgacgccgaa accagcacgc gggacgcgtg cgctacccaa
     5401 accaacgagc cccaaatcat tgtggggacg catgcgttgc tttacgaaag tgtttcgttt
     5461 tcgaatctcg gactggcggt aattgatgag cagcacaagt tcggagtggc gcaacgcgcg
     5521 cggctgactg cgcgcgagcc ggcgccggac gtgctggtga tgaccgcgac cccgatcccg
     5581 cgcacgctaa cgatgaccat ctacggcgac ctcgacgttt cgacgattga tgagctgccg
     5641 cggaaccgcg gaaagattgt caccgcagtg cgtgacacat cgaagctggg cgaggtgctc
     5701 agcttcttgc gaacgcaact ggacaaggga cgtcagcttt atgtgatcta cccattaatt
     5761 gacgaaagcg acaagctgga cgtgaaagcc gccgcggcgg aatacgagct atggcgtgaa
     5821 cgcctgcatc cgttccgatg cgagttgctt catggccgga ttccggcgcc ggaaaagcag
     5881 caaatcatgg atcgatttcg ccgcggcgac accaacgcat tgatcagtac gaccgtgctc
     5941 gaggtcggcg tagatgtgcc aaatgcggct gtaatgctga ttgaaaatgc cgagcgattc
     6001 ggtctggcgc agctgcacca gcttcggggc cgaatcggtc gcggcgaaca caaatcgtat
     6061 tgcattttgc taagctccag cgacgcgaaa gagacatcgg cgaagctcgc cgtcttggaa
     6121 cgaacaacga acgggtttga agtggccgaa gcggactggg agttacgcgg cccgggtgat
     6181 gtgctcggca aagcacaaag cggcttgccc gcattcaaga ttggtgattt gaaacgcgac
     6241 gccgaactga tgcggcgcgc ccgtgcggct gccatgtcga tcttcgaaaa ggacccccgc
     6301 ctggagcagc ctgagaatca acatttccga cgcttaattg tcgaacaaca gggacaaagt
     6361 ttctctcacg ttagttaatg aaaaacctcg cgaaattttt gatttttgtg ctgctgctaa
     6421 gcgcaggaat ttcgctgctt tacgattacc gcctcaaaca tggcggttta aaggttccgt
     6481 ccgggcgcgc gccggaaagg tacacacttg cggctgagcc ggcggtgaat ccaaaacaag
     6541 tcgcgtcgct cgaatcattg aaccaggaac ggcgtgcgct ggtgaacagc gtcgtgccat
     6601 cggtcgtagc ggtgaagaca tcgaccaagc tcgctattcg ccgtgaatat ggagttgatc
     6661 cgttcgaatt cttttttccg aatcagcgaa gatctcgcaa tccacgcgac gaagcgctgg
     6721 tgcagaattc acttgggtcg ggcgtcatcg tgaccaatga gggccatatc atcaccaaca
     6781 atcacgtggt gaccgacaga caaggccgtc ccgtcgatca aattgaagtg caactgagcg
     6841 atggtcgaag caagaaggcg cgtctggtgg gcgctgatga acaggtggat cttgctgtgc
     6901 tcaaaatcga tgagcccggt gtcaaaccgc tcaagcttgc tgattctgac agggtgcaac
     6961 ccggagattt tgttcttgcg attggtaatc cgcttggatt tgaggagacc gtaacggacg
     7021 ggatcatcag ctccaaaggg cggcccaatc gcagcgattc tttcgctgat ctgctgcaga
     7081 ccaatgcggc aattaatccg ggcaacagtg gcggtccgct gatcaatatc agtggtgagg
     7141 tgattgggat taacaccgcg atcgcctcga ccaccggcgg ctcgcaggga ctcggtttcg
     7201 ccattccctc gaatacagtc cacatggcgc tggaaagctt gttaaagcag ggacggatca
     7261 tacgcgggta tcttggtatc cagacgggac cgttggagcg tggtgccagt ggctcggata
     7321 ctggaggcgt aactgtaggc gaagtgctct ccgggtcgcc ggcggaacag gccggcctgc
     7381 aaccgggcga tgtgattcgt aaattcgacg gacgcgatgt gaagaatttc aacacgcttc
     7441 gtacgctcgt cgccggagcc ccactggaca gacaaataga gctgcaaatt gtccgcaacg
     7501 gaaaaccgtt aacggtaaaa acgcagatta aggagcagcc agttaattac gaaagcgcgc
     7561 gtgttcttcc gcgcggaaac cagccacagc cacaagcccc gcaacagcct aacgaccagg
     7621 aaacagttga tagtccactg gcctcaattc acgtggacga actcactccg gaaagagcgc
     7681 gccagcttga tctgcctccg aatgtgcagg gcgtcttggt caccgacgtc gatccc
//
LOCUS       DATDAJ010000062         2376 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_362816, whole genome shotgun sequence.
ACCESSION   DATDAJ010000062 DATDAJ010000000
VERSION     DATDAJ010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362816"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            455..1156
                     /locus_tag="VIS53_01480"
     CDS             455..1156
                     /locus_tag="VIS53_01480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766483.1"
                     /translation="MAAPDEAATWRQITDDVVVMSFPWNVFRIDFARNVTLLRLRDGR
                     VVIHSSAPFTTEDITAIRGFGEPAWLVDATLLHDTFAKEGRAAFPDLPYLAPDGFTKA
                     SGIPTEPLGSPPSDWKDEIDVLKLDGNRMNEHALFHRRSATLVVADLFFSFPGETRGW
                     ARFFVRHIMRLPRLFGISVFFRMTIGDRQAFKSSMKALLQWKIDRLVVAHREPLDKDA
                     KPTVEQGLRDSKLLS"
     gene            1274..2287
                     /locus_tag="VIS53_01485"
     CDS             1274..2287
                     /locus_tag="VIS53_01485"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5766484.1"
                     /translation="MRTARKIRYRLEWLGLKSAAKVIPLLSRKACYRLALLLGSLSAM
                     LDRRGRRVALSNLRVAFGDEISAEGRAQIVRESYQHFARTMLDFFWSPRLTSQNFSRY
                     VEFENRERWDEENTRPGKPVIVGCYHYSNFEWLSIVSAFAGLEGVVIAQQFKNPLLDP
                     IFLKLRQRSGHRVAPRKGAVRHLYRALRRGERFALLVDLTISAKLPTVAIKCFGLERC
                     VTFAHVWLHQRTGAPLINVHCEPLPGGRYRVVFHPRIEFPAGASLQEMAQACWDQFEP
                     VVRKNPAPWLWMYKHFRYRPVTANLAAYPFYANISEDFERRLDEGARKLPPMTSKVKL
                     PRM"
BASE COUNT          507 a          632 c          694 g          543 t
ORIGIN      
        1 aatggcgaag gcgcgtccct cagcgtgttt aacgataagg ctggcgctga tgagtcggtg
       61 cgtctagctg cggactgggt aaaagagcat ctgtctaaac ttctcattca gaaacccgag
      121 attatcgaag ggccaatcag ggctcacgat tgagcactgt cgtgtacgtg attcgtgaat
      181 ggttgaatcg ttacatcgaa atcgggcgag aaaattgact cgctgttgag cgatcgcagg
      241 ccattgcgct cttaggaaga aagtaagaag gaagaagttc ataggaagtg accagccttc
      301 gccaaggcca cggcttggca agcgagtgac agggaaagcc ggaaacgccg aacgctcaac
      361 gtccaacgcc caatgtcgaa ctcaatcacc gcggagcgat cgcaggcagt tgcgctctcg
      421 aagaaagtaa gaagtaagaa ggaaaatttt ccgtatggca gcgcccgatg aagccgccac
      481 gtggcgccaa attaccgacg atgtcgtggt gatgtcgttt ccgtggaatg tattcaggat
      541 cgatttcgcg cgcaatgtga cgctcttgcg cctgcgcgat gggcgagtcg tgattcattc
      601 atcggcgccg tttacaacag aagacatcac tgcgatccgc ggatttgggg aaccggcctg
      661 gctggttgac gcaacgttgt tgcacgacac cttcgccaaa gaagggcgtg ccgcgtttcc
      721 cgatttaccc tatctcgcgc cggatggttt cacgaaagcg agcgggattc cgactgaacc
      781 attaggttcg ccgccatcgg actggaagga cgagattgac gttctcaagc tcgatgggaa
      841 tcgaatgaac gaacatgcgt tgtttcaccg tcggtcggcc acgttggtcg ttgcggacct
      901 gttcttttcc tttccggggg aaacgcgcgg ttgggcccgc ttttttgtcc ggcatattat
      961 gcggttgccg cgcctgtttg ggataagtgt tttctttcgc atgacgatcg gtgaccgaca
     1021 ggcgtttaag agttcgatga aggcgctgtt gcaatggaaa atcgaccgcc ttgtcgtggc
     1081 ccaccgggag ccgctcgata aagatgcaaa gccaacggtt gagcaaggac tgcgtgattc
     1141 gaaacttttg tcctgaatgc tcaaaacagt ccgtagacag aagttgagac ttgagggttg
     1201 acgtcgaaag cgtaaaaggt tgccagctga gcgggcggtc gcagcctgcg cgaagcgtgc
     1261 ttacactgga acgatgcgca cggcgagaaa gattcgctat cgtctggagt ggctcgggct
     1321 caaatccgcc gcgaaagtca ttccactttt gtcgcgcaaa gcttgttatc ggctggctct
     1381 tttgctcggc tcccttagcg ccatgctcga tcgtcggggt cgacgcgttg cgctgagcaa
     1441 tctgcgcgtg gcctttggcg atgagatttc ggccgagggc cgcgcccaga tcgtgcgtga
     1501 atcctatcaa cattttgccc gcaccatgct cgattttttt tggagccctc gcctaacgag
     1561 tcaaaatttc tcgcgttacg ttgagttcga gaatcgcgag agatgggatg aggaaaacac
     1621 gcgcccgggc aagccggtca ttgtcggttg ctatcattac agtaacttcg aatggctcag
     1681 cattgtctcg gccttcgccg gtctcgaagg tgtcgtcatc gcgcagcaat tcaaaaatcc
     1741 actgctcgat ccgatcttcc tgaagttgcg ccagagaagc ggccatcgcg tggcaccgcg
     1801 caaaggcgcc gtcaggcatc tttaccgggc cctgcgccgc ggcgaacgct tcgccttgct
     1861 cgtcgatctg acaatttcgg cgaaactgcc gaccgtggcg attaagtgct tcgggcttga
     1921 acgctgcgtc acctttgctc acgtgtggct gcaccagcgc acgggcgcgc cactcatcaa
     1981 cgtccattgc gagccgctgc ccggcggccg ttaccgcgtg gtttttcatc cccggattga
     2041 atttcccgcc ggcgcttcgc tccaggaaat ggcgcaagct tgctgggacc agttcgagcc
     2101 ggttgtccgg aaaaatcccg ccccctggct ctggatgtac aagcattttc gttaccggcc
     2161 ggtgacggcg aatctggcgg cgtatccttt ctacgcgaat atttcggagg atttcgagcg
     2221 ccgcctcgat gaaggcgcgc gcaaacttcc gccgatgact tcgaaagtga agctgccgcg
     2281 aatgtgatcc gtgaatcgtt gaatcgttga atcgttacat cgttaaagtg cgcgagttcg
     2341 tcccaggcta acttgagtaa ctcagataac tgcaac
//
LOCUS       DATDAJ010000063         8126 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_362871, whole genome shotgun sequence.
ACCESSION   DATDAJ010000063 DATDAJ010000000
VERSION     DATDAJ010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8126
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362871"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..934)
                     /gene="tilS"
                     /locus_tag="VIS53_01490"
     CDS             complement(<1..934)
                     /gene="tilS"
                     /locus_tag="VIS53_01490"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:NF013348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEY5766485.1"
                     /translation="MQTLSADSRVTRDFPPDARYLIGVSGGRDSVALLHWLGSLGYER
                     LIVCHLNHRLRGRSGDADAQFVKRLVERYNQEPVGQALRVPGARMDKRRTRPATASRI
                     QFELGSANIRALGKKQKISIESAAREARYAFFAETARRRKCRTIFVAHHADDLVETFL
                     INLFRGAGSAGLSAMREISTRRIDGVDLTIVRPFLCAWRKEIDDYVTEHRLRFREDAT
                     NKNLTPLRNRIRHRVIPYLEKTLGRNIRQNIWRTAMIAADEEKWIESELRDSTDTDLS
                     VVKLRALPIALQRRALLKWLRAQNVADVGFDAIER"
     gene            1144..1371
                     /locus_tag="VIS53_01495"
     CDS             1144..1371
                     /locus_tag="VIS53_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766486.1"
                     /translation="MKNDQTLYGILAGSEEKGREVMETAVYATCILSVVVAIFQFIGQ
                     PMPDPFAGFTPAAQPVPVVSHSAKAVWETKS"
     gene            1561..2190
                     /locus_tag="VIS53_01500"
     CDS             1561..2190
                     /locus_tag="VIS53_01500"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY5766487.1"
                     /translation="MSQPQTDSAPDRRCQILDAALICFAKRGFHQTSMHDISAEAGIS
                     VGLIYRYFENKEAVISAMADRHKKEISEVLQRAKQAPTLLESLEILFTAHCCEEETPV
                     VSAFVVDLYAEASRNPRVADLVRDVLETAMAGVTELISRSPEAQNNTRGLLPIELAEL
                     IFAVARGMLMLDVLRPQEMTATERRERQLQVTRRLWSCLFKPEAELAYA"
     gene            2219..3364
                     /locus_tag="VIS53_01505"
     CDS             2219..3364
                     /locus_tag="VIS53_01505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5766488.1"
                     /translation="MQSPPKRRRKGIVVAIALLLAIGAFVFGTKFLQIGKMMSTPHTI
                     PPTTVTSATVKEEDWAPRLTAVGSVSAVQGAVVSAELAGIVSEINFQNGAEAKKGEVL
                     MKLDASQEEALLRSAEAEAQLARTDLERARDLAIKKVVSSAELDSAQSKFRRMNAVVD
                     QMRSSIAKKTVTAPFDGQLGIRQVNVGQMINAGQQVVGLTALDPVYVDFAVPDQYLSK
                     LAKDLEVTVRSDAFPGRLFKGKLTAINSMVDPVTRNVPLQATLENPDHALHPGMFAKV
                     EVALAETKKTIVIPGSAVSYAPYGDSVFVLEKQKDPKTGKESEVLRQQFVRIGEARGD
                     FVAVTQGLKAGETIVSTGVFKLRNGMAVAVNNDLAPKPELNPKPPDT"
     gene            3397..6570
                     /locus_tag="VIS53_01510"
     CDS             3397..6570
                     /locus_tag="VIS53_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5766489.1"
                     /translation="MTSFTDLFIKRPVLAIVVSFVILIAGLQAMKTLNVRQYPRSDIA
                     AITVTTVYVGADAELVRGFITTPVERAIAAADGIDYIQSQSSQSLSTITARLKLNYDA
                     NKALSDISARLDAIRNNLPPESQIPVIAIQAADSQFASAYLSFTSDILQPNEVTDYLV
                     RLVQPRLTAVGGVQKADILGGRTFAMRIWMKPDRMAALNISPSQVREALTKNNFLAAV
                     GNTKGSLLQVNLTANTDLHTADQFKQLVVRRDKNTLVRLGDIADIVLGAEDYNTEVRF
                     SGQKAVFMGIWVLPNANSLDVIKRVRVELEQIKKELPKGMTAEMAYDATAYINDAIHE
                     VVKTLIDTLLIVMLVIFLFLGSVRSVIVPIVAIPISLIGALFLMQLFGFSLNLLTLLA
                     IVLSVGLVVDDAIVVVENIERHIAEGKSRMQAALVGARELIGPIIAMTITLAAVYTPI
                     ALQGGLTGALFREFALTLAGAVFISGVVALVLSPMMSAYLLPPHHVEHGFKGWVDRTF
                     DRLRDWYGNHLDRTLQARPAVYIVWAGISLLAGLMFLAIPKVATKELAPKEDQGVIFG
                     VITAPANATIDDTIRYADAAGKVFHDIPDTRFTFQITNPSSGFGGMVLKPWGVRKTPT
                     KDYLPIVQEKLSAIPAIQMFPIMPEALPGSDNFPVSFIIASTADQERILEFAKDIFQK
                     AMQAHVFQFGDIDTKIDQPQARIVIDHDKVSSMGLDMQKIGADLSASIGGNYVNWFNM
                     EGLSYKVIPQIKRVDRLNPEQLDQIYVSGPNNQLISLNTIAHMEHTTVARSLNRMQQL
                     NAVTISGVPAGSVDATLKFLEDEAHRILPPGYVIDYTGGSRQLRHEGNTFLGVFMLAV
                     LLIFLVLAAQFNSFRDPLIILLGSVPLALFGAAVFMFLKMPFGKFFTDGWTTSFNIYS
                     QVGLVTLVGLVSKNGILIVQFANELQRKGLAKLAAVAQASRIRLRPILMTSVATVAGH
                     FPLTLVTGAGAAARNSIGLVLVGGLTIGTIFTLFIVPSLYMLLAREHHEKSLMDVGWD
                     DNPEDVDLTPEMAPALAPDGNGNGWKK"
     gene            complement(6911..7198)
                     /locus_tag="VIS53_01515"
     CDS             complement(6911..7198)
                     /locus_tag="VIS53_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766490.1"
                     /translation="MQTKLPLNGTIQHPDLAEALRGENGTFFCQQAGQGYIVTAAEGF
                     SIKSLRPVGRKIVEANVLMTAGPEPWAITKISEDVLEFSSIPQSPRQQRAA"
     gene            7699..>8126
                     /locus_tag="VIS53_01520"
     CDS             7699..>8126
                     /locus_tag="VIS53_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766491.1"
                     /translation="MAPQRCAHGVCLFFWKRRRLICVIVILRTATQGDFSPAEMKLLQ
                     HLYPQFLTALRRLGSLEREHSVRMDFEEFLNRLPMPTILLRWNLKVIYQNRAAREFCA
                     MWEKGPEEAKRTKATSPIPSEILDRCRVLKQQWVDASRANT"
BASE COUNT         1836 a         2235 c         2247 g         1808 t
ORIGIN      
        1 cgcgctcgat cgcgtcgaat ccaacatcag ccacgttttg cgcccgcagc cattttaaga
       61 gcgcccggcg ttgaagcgcg attggcaatg cgcgaagctt taccacggag agatccgtat
      121 ctgtcgaatc acgcagctcg ctctcgatcc atttttcttc atccgcagca atcatcgctg
      181 ttcgccagat gttctggcgg atgttgcggc caagtgtttt ctccagatac ggaatgaccc
      241 gatgtcgaat gcggttgcgc agcggggtga gattcttatt cgtagcatcc tcgcgaaatc
      301 tcagccggtg ctcggtgaca taatcgtcga tctctttacg ccaggcacaa agaaacggcc
      361 gcacaatcgt taggtcgacg ccgtcgattc gccgtgtaga aatttcacgc atagcagaaa
      421 ggccggcgct gccggcacca cgaaacagat tgatcagaaa cgtttcgacc aaatcgtcgg
      481 cgtgatgcgc gacgaagatc gtcctgcact ttctgcggcg tgcggtttca gcaaagaatg
      541 catagcgcgc ttcacgcgcc gcagattcga tcgagatctt ctgtttcttt ccgagcgcac
      601 ggatgtttgc agaaccgagc tcaaattgaa tgcggctggc cgttgcaggg cgagttcttc
      661 gcttgtccat tcgcgcgcct ggcactcgga gcgcctgccc tacaggttcc tggttgtagc
      721 gctcgaccag ccttttcacg aactgcgcat cggcatcgcc cgatcgcccg cgcaagcgat
      781 gattcagatg gcaaacgatc agtcgttcgt aaccgaggct gcctaaccag tgcagcagcg
      841 cgacggaatc gcgcccgccg gacacaccga tgagatagcg cgcatccggg ggaaagtcgc
      901 gggttactcg tgagtcggcg cttagtgttt gcatgactcg tcttctgtca ttctgagcgc
      961 agcgaagaat ctctgatcat gtggtcaagc gtaccacgga gcaaacccag agatgtttcg
     1021 ctccgctcaa catgacaatt atttgaatcc aattcacgag gcagcggcat ccaactttca
     1081 aaaccaatca tgaacaatca acaaccaaga gacaaagcgg gaagtccgcg gcgtcttaaa
     1141 attatgaaaa acgatcaaac attatacggg atactggctg gctcggaaga gaaaggccgc
     1201 gaggtaatgg aaacggcggt ttatgccacg tgcattttga gcgtggttgt cgcgatcttc
     1261 caattcatcg ggcaaccgat gccagatccg ttcgcggggt tcacaccggc agcgcaaccc
     1321 gttccggttg tttcgcactc cgcgaaagca gtgtgggaga cgaagtcctg aacgccgtgg
     1381 cgcgatacgt cgaataagac aggggcgccg cgccgcgccg attaccgaag atttcgacgt
     1441 ggcgcagcgt ccttgtcagg gaatcgcccc gagtgttctc aatcggccat ccgccaccta
     1501 aaagaacggt ccgatgtgtg atttgacaat gaatgaacgt tcattcattg tcccaaatct
     1561 atgtcccaac cccaaacaga ttcagctcca gatcggcgtt gtcagatcct cgatgccgcc
     1621 cttatttgct tcgcgaagcg cggttttcat caaaccagca tgcacgacat cagcgctgag
     1681 gccggaatta gcgtcggatt aatctatcgc tatttcgaaa acaaagaggc ggtcatttcc
     1741 gcaatggcgg accgccacaa gaaagagatc tccgaggtcc tccaacgagc caaacaggcg
     1801 ccgacgctcc tcgagtcgct cgaaatccta ttcaccgctc attgctgcga agaggaaacc
     1861 ccagtggtct ccgcattcgt tgtggacctc tatgcggaag cgtcacgaaa cccgcgcgtt
     1921 gccgatttgg tgcgcgacgt tttagaaacc gcaatggccg gcgtcaccga actgatcagc
     1981 aggtcgccgg aggctcaaaa taacacgcga ggccttttgc caatcgaatt ggcagagtta
     2041 attttcgccg tcgctcgtgg gatgttgatg ctcgatgtgc tgcgtccgca ggaaatgacc
     2101 gcgacggagc ggcgggagcg acaattgcaa gtgacgcgca gactgtggag ctgtttgttc
     2161 aaaccggagg cagaactcgc ttatgcatga tgtagcgaga ccagttgcaa atcgcccgat
     2221 gcagtccccg ccaaagcggc gccgaaaagg cattgttgtc gcaatagccc tgctgctggc
     2281 gatcggcgct tttgtttttg gcaccaaatt cctgcaaatc ggcaaaatga tgagcacgcc
     2341 gcacacgata ccgccgacga ccgttacgag cgcaacggtg aaagaggaag attgggctcc
     2401 acggctgaca gcggtgggat cggttagcgc tgtgcaaggt gcggtcgttt ccgcggagct
     2461 cgccggcatt gtgagcgaaa tcaatttcca aaacggcgcg gaggcgaaaa agggcgaggt
     2521 cctcatgaaa ctcgatgcgt cgcaagagga agcacttttg cgatctgcag aagctgaagc
     2581 gcagctggcg cggacggatc tcgaacgagc ccgcgatctt gccataaaga aagttgtttc
     2641 aagcgccgag ctggactctg cccaatcaaa attcaggcga atgaacgccg ttgtcgatca
     2701 gatgcgttcc agcatcgcaa agaagacagt taccgccccg ttcgatgggc agcttggtat
     2761 tcgccaggtg aacgtcggcc aaatgatcaa tgcaggtcag caggtggtcg ggctgaccgc
     2821 gcttgatccg gtctacgtcg attttgcggt gcccgaccaa tatctctcga agctggcgaa
     2881 agatctggag gtaacggtgc gctccgacgc gttccctggc cggctgttca aagggaaatt
     2941 gactgcgatt aattccatgg tggacccggt cacgcgcaac gtgccgttgc aggcgacatt
     3001 ggaaaatccg gatcacgcgc tgcatcccgg catgtttgca aaagttgaag ttgctttggc
     3061 ggagacaaaa aagacgatcg tgattcctgg atcggcggtg tcttatgcgc catacggcga
     3121 ttcggttttc gtgctcgaga aacagaagga tccgaagacg ggcaaggaat cggaggtgct
     3181 tcggcagcag tttgtgcgga tcggcgaagc acgtggcgat ttcgtcgcag tcacgcaagg
     3241 attgaaagcg ggcgaaacaa ttgtgagcac cggagtcttt aagttgcgca acggaatggc
     3301 tgtggccgtg aacaacgatc tcgcgcccaa accggaactg aatccgaaac cgccagatac
     3361 ctaaatgaaa tccgaagcac ggatatcgaa ttgtaaatga catcattcac cgatctcttc
     3421 atcaagcgcc ccgtactggc gattgtagtc agcttcgtca tcctcatcgc gggattgcag
     3481 gcgatgaaaa cgctgaacgt tcggcaatat ccgcgcagcg acatcgccgc gatcaccgtc
     3541 actacggttt acgttggcgc tgatgccgag ttagtgcgcg gctttattac cacgccggtc
     3601 gagcgggcca tcgcagctgc ggatggaatc gattacatcc aatcacaaag cagtcagagc
     3661 ctgtctacga tcaccgcgcg attgaagctc aactacgacg cgaataaagc gctctccgac
     3721 atcagcgcga gactggacgc gatccggaac aatctgccgc cggaatcaca gatccccgtc
     3781 atcgccattc aggccgcaga ttcgcaattt gcttccgcat acttgagttt cacttcggac
     3841 atccttcagc ctaacgaggt cacagattat ctcgtccggc tcgtccagcc gcgacttacg
     3901 gccgtcggcg gcgtccaaaa ggcggacatt ctcggcgggc gcactttcgc gatgcgcatc
     3961 tggatgaagc cggaccggat ggcagcattg aatatcagtc cttctcaggt ccgcgaggca
     4021 ctgacgaaaa acaatttcct tgctgcagtc ggaaacacca agggctcgct tttgcaggta
     4081 aacctaaccg ccaacacgga cctgcacacg gccgaccagt tcaagcagtt ggttgttcgc
     4141 cgggacaaga acacactcgt taggcttggc gacatcgccg acatcgtgct cggcgcggaa
     4201 gactacaaca ccgaagtgcg attctccgga caaaaggctg ttttcatggg catctgggtg
     4261 ctgccaaacg ccaactcgct cgacgtgatc aaacgcgttc gcgtcgagct tgagcaaatt
     4321 aagaaggagc tgcccaaagg catgacagcc gagatggcgt atgacgccac ggcgtatatc
     4381 aacgacgcga ttcacgaagt cgtaaaaacg ttgatcgaca ctctgctaat cgtgatgctg
     4441 gtgatctttt tgttcctagg ctcggtccga tctgtcatcg tcccgattgt ggcgattccg
     4501 atctcgctga tcggcgctct gtttttaatg cagctgttcg ggttcagtct gaacctactg
     4561 acgcttctcg cgatcgtgct ttcagtcgga ttggtcgtcg acgatgcgat cgtggtggta
     4621 gaaaatatcg aacgccacat cgcagagggg aaatctcgca tgcaggcggc gctggttggc
     4681 gcgcgcgaac tgattggccc aatcatcgcg atgacaatca cgctggctgc cgtttatact
     4741 ccgatcgctt tacagggtgg actaaccggc gcgttgttcc gcgaattcgc gctcacacta
     4801 gcgggtgcag tcttcatttc gggtgtcgtt gcgctcgttc tttcgccgat gatgtcggca
     4861 tatttgttgc cgcctcatca cgtcgagcac ggcttcaaag gctgggtcga tcgcacattt
     4921 gatcgtctcc gcgattggta cgggaatcat ctggaccgca cgttgcaggc ccgccctgct
     4981 gtttacattg tttgggctgg gatttcgttg ctcgcgggtt tgatgtttct cgcaattccg
     5041 aaggtagcga cgaaggaact cgcgccgaag gaagatcaag gcgtgatctt tggcgttatc
     5101 accgcgccgg caaatgcgac cattgatgac acgattcgat atgccgacgc agccggaaaa
     5161 gtgtttcacg atattcccga tactcgtttc acgtttcaga ttacaaaccc aagcagcggg
     5221 tttggcggaa tggtgctgaa accgtggggc gtgcgcaaaa cgccgacgaa agattatttg
     5281 ccgattgtac aggagaaatt gtctgctatc cctgcgattc aaatgtttcc aatcatgccg
     5341 gaggcgctcc ccggctcgga caattttccg gtcagcttta tcatcgcgtc cacggcagac
     5401 caggaacgaa tccttgaatt cgcgaaggac attttccaaa aagcgatgca ggcgcacgtg
     5461 tttcagttcg gcgacatcga cacaaaaatc gaccagcctc aagcgcggat cgttatcgat
     5521 cacgacaagg tctcgtctat gggactcgat atgcagaaaa tcggcgccga cctttctgcc
     5581 agcatcggcg gaaattacgt caactggttc aacatggaag gtctcagcta caaagtcatc
     5641 ccgcagatca aacgcgtgga ccggttgaat cccgaacaac tggaccaaat ttacgtcagc
     5701 gggcctaaca accagttgat ctcactgaac acgatcgcgc acatggagca tacaactgtc
     5761 gcgcgatcgc ttaatcgcat gcagcaactg aatgccgtca ccatcagcgg cgttccggcc
     5821 ggttcggtcg atgccacgct caagttcctg gaggatgagg cacaccggat tctgccgcca
     5881 gggtatgtga tcgactatac gggtggctca cgtcaattga ggcacgaagg aaacacgttt
     5941 cttggagtct ttatgctcgc ggttctgctg attttccttg ttctcgcggc gcagtttaac
     6001 agtttccgcg atccgttgat catcctgctc gggtccgttc cgctcgcgtt atttggcgca
     6061 gctgtgttca tgtttctgaa gatgccgttt ggaaaatttt tcacggacgg ctggactacg
     6121 tcattcaaca tttattctca agtaggcctc gttacactgg tcggtctcgt ttccaagaac
     6181 ggcattctta ttgtgcagtt cgcgaacgag cttcagcgga aagggctcgc aaaactcgcc
     6241 gctgtggcgc aagcctcgcg aattcgcttg cgccctattt tgatgacgag cgtcgcgact
     6301 gttgcgggtc acttcccact tacactggtg actggcgccg gtgccgctgc gagaaattca
     6361 atcggtcttg ttctcgtcgg cggactgacc atcgggacaa tcttcacgct gttcatcgtt
     6421 ccgtcgctct acatgctcct cgcgagagag catcacgaaa aatctttgat ggatgtcggc
     6481 tgggacgaca acccggaaga cgtcgatctc acgcctgaga tggcgcccgc actggcgcca
     6541 gacgggaacg gcaacggttg gaaaaaataa tcaaggaacg atggcttggg cagccgtcga
     6601 caagcacctg acggctggga agccgtcact ccttggctca aaacagaagc ctcggtgagt
     6661 tgccccaccg aggctttgtt ttttgcaacg gctccccctg aaccgctgca actcccgaaa
     6721 tttagtcagg ccctcgcgac tgaaagttcc gctacggcca cagcttacgg ggacactttc
     6781 agcggcttat ctgccgctgc tcgctccccg aaattcacgc agaacggcgg gatgggtcgt
     6841 aagccaaact tgattgggta gccgccagtc gccccgcgtg cgctaaccac gcggggcact
     6901 atttcagcct ttaggcggct cgctgttgac gaggggattg tggtatagag ctaaactcaa
     6961 gaacgtcctc ggagattttg gtaatcgccc agggttccgg acccgccgtc atgagcacat
     7021 tggcctccac gatcttgcga cctactggcc gtaatgattt aatggagaag ccttccgctg
     7081 ccgtgactat gtagccttgg ccagcttgct ggcaaaagaa tgtgccgttc tctccgcgca
     7141 atgcctctgc caagtcggga tgttgaattg tcccatttaa tggtagtttt gtttgcatct
     7201 ttccaacgtc gcgcactgcc ggatgatcgc gaggtaactt aggttgcctt tttctttctc
     7261 gattgttgaa cgtttcggca accggacgct gtctaaaagt gaagcaacga acggcgcgcg
     7321 cgctagagcg ggagaaacga cgtgcagagg cggaagggga attccaaaag tgacggcaag
     7381 caggagtcgg tgattgactc ggcagtggaa aaacccttgc ttaggctgca caggacccta
     7441 aacatccgct cgtactggaa agctattcag cggttgctct ctgccgcgat gccaaatcac
     7501 gtaatcggcc tcgcccttca gcacaatccg gctttgccga tgatcgcgag atggacgcgg
     7561 ccgatttctc acgatttctt cgcagctgaa cctctcaaga gttatgctct ccggccgacg
     7621 cgcaaaaagt gtgtgcgtct gagcaatctt tttcgcaatc ggacctgctt tgcgcggtct
     7681 gccttttatc gccgatacat ggcaccgcag agatgtgcac acggcgtctg tctctttttt
     7741 tggaaacggc gaagacttat ctgtgtgatc gtaatcctgc gcacggcgac gcaaggcgat
     7801 ttttcgccgg cggagatgaa attgctgcaa catctttacc cccagtttct gaccgcgctt
     7861 cgccggctcg gatcgctcga gcgcgaacac tcggtgcgga tggactttga agaattcctg
     7921 aaccggttgc caatgccgac gattcttttg cgatggaact taaaggtgat ttaccaaaac
     7981 cgggccgcgc gcgagttctg cgcaatgtgg gagaaaggac ctgaggaagc gaaacgaacg
     8041 aaagcgactt cgccgattcc gtccgagatt ctggatcgat gtcgcgtgct caagcaacaa
     8101 tgggtagacg catcccgcgc caacac
//
LOCUS       DATDAJ010000064         3229 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_367142, whole genome shotgun sequence.
ACCESSION   DATDAJ010000064 DATDAJ010000000
VERSION     DATDAJ010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3229
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367142"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            336..941
                     /locus_tag="VIS53_01525"
     CDS             336..941
                     /locus_tag="VIS53_01525"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY5766492.1"
                     /translation="MKFFILLAVLLTSAAFAADEKKEEKSPMNSSNEVAVIKTSEGDM
                     VVQFWMDAAPKTIDNFKKLARQGFYDGTIFHRIVKGFMIQGGDPNSKDPAKEDSYGQG
                     GPGYKVNAEFNDHSHDAGVISMARSSDPDSAGSQFFVCLAPVHRLDHQYTTFGKLIKG
                     QDVLEKIGEIPVTKNSTGEPSKPTKRVVIESIKIVPGDSVK"
     gene            1102..1986
                     /locus_tag="VIS53_01530"
     CDS             1102..1986
                     /locus_tag="VIS53_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HEY5766493.1"
                     /translation="MNSQLTRIALIQMRCSAEPEKNLAHAIEFVRNAARQGAEIVCLP
                     ELFRSQYFCQTEDHKNFDLAEEVPGKSTAELGKVARETGTLIIASLFERRSAGLYHNT
                     AAIIDADGKLLGKYRKMHIPDDPLYHEKFYFAPGDLGFRAWDTARGKIGVCVCWDQWY
                     PEAARLTALRGAEIIFYPTAIGWHPSEKKEFGKAQHSAWETIQRGHAIANGCYVAVAN
                     RVGHEAPAGGDGIEFWGQSFVCGPDGEIIAKGSIDQEEIVTAEIDWARVNEHRTHWPF
                     LRDRRIDAYSEINRRLID"
     gene            2171..>3229
                     /locus_tag="VIS53_01535"
     CDS             2171..>3229
                     /locus_tag="VIS53_01535"
                     /inference="COORDINATES: protein motif:HMM:NF012593.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HEY5766494.1"
                     /translation="MTANAAQPRRRPWYRPSLTVQIMIGLVVGGVIGWLRPDWGNAVY
                     FLRDIFINLIKSIIAPLVFSTIVVGIAGAGALRNVGRMGIKALIYFEIVTTVALFIGL
                     AIVNLTKPGVGVTLEVTNTSAIQSIEHTHPKSLVETIVHAFPSSIIEAMVRGDVLQIV
                     AFSVLFALAVSAVGEKGKPIVRAMESLSQVMFKFTNYVMMFAPIGVGAAMAHTIGTQG
                     LGVLKNLGALVLSLYLALIIFVVLVFGLVILIARVPLQQFVRAVREPAVLAFATTSSE
                     SALPKAMESMERLGVPRRIVGFVMPTGYSFNLDGSTLYLAMASVFVAQAAEATTGQHM
                     GWDRQIVMVLTLMITSKGV"
BASE COUNT          741 a          815 c          967 g          706 t
ORIGIN      
        1 aacgccgcgc tcgcggcaaa aattcccatc atgacgacgg tgcgcgccgc gttggccagc
       61 gcgaacggca ttcgctcact gcaaaaacga aaagttcagg tgcggagctt gcaagaatat
      121 cacgcttcgc agacgttaaa tcgttgaagc gttgaacggt tgaagcggaa aaagagcatt
      181 gtcattctga gcgaagcgca gcggagtcga agctgcaacg cagcggacga agtccgcgag
      241 gctaggcttt caatcccgcg gagttaccta atggtgccgt cacgggtctt tccgacttcg
      301 ctcgacatga caatgcgttg atgccattgg tcagcatgaa attttttatt ctcttagcag
      361 tgttgttaac ctcggccgct tttgccgccg acgaaaagaa agaagaaaaa agtcccatga
      421 attcatctaa cgaagtggcc gtcattaaga cgagcgaagg cgatatggtg gtgcagtttt
      481 ggatggatgc cgcgccaaag acgatcgaca attttaagaa acttgcgcgc cagggattct
      541 atgacggcac gattttccac cggatcgtca aaggatttat gatccagggc ggcgatccga
      601 attcgaaaga tccggcaaaa gaggatagct acgggcaagg cggacccggg tacaaggtca
      661 atgccgagtt caacgatcac agccacgatg ccggcgttat ttcgatggcg cgcagttcgg
      721 atccagactc cgccggttcg caattcttcg tttgcctcgc cccggtgcac cggctcgacc
      781 atcaatacac gacgtttggc aaactgatta aaggccagga tgtgctggaa aaaatcggtg
      841 agattccggt gaccaaaaat agcaccggcg agccgagcaa accgaccaaa cgcgtggtga
      901 tcgagagcat caaaatcgtg ccgggtgatt ctgtgaaata aatttcatta acacctggct
      961 tgagtccagg tgttcgcgcg atgagctggt cccgagccgt tttagcggct tcaggtgtta
     1021 ccgaaataag ccgttgaaac ggctggcggc gcttgcgtca cgctcaacac cggtctaaag
     1081 cccggtgtta atgaaagggc tatgaattcg caattaacga ggatcgccct gatccagatg
     1141 cgctgcagcg cggagccgga gaagaatctc gcgcacgcga tcgaatttgt tcgcaatgca
     1201 gcgagacaag gcgcagagat tgtctgtctg ccagagcttt ttcggtcgca atatttttgc
     1261 cagacagaag accacaaaaa cttcgatttg gccgaggaag tgccgggaaa atctaccgcc
     1321 gaactgggaa aagttgctcg cgaaacaggc acactaatta tcgcgtctct cttcgagaga
     1381 cgcagcgccg gtctctatca caacacggcg gcaatcatcg atgcggacgg aaaactactc
     1441 ggcaaatatc gcaaaatgca tattcccgat gatccgctgt atcacgaaaa gttttacttc
     1501 gcgccgggcg atctcggatt tcgagcgtgg gatacagcgc gcggtaagat cggtgtctgc
     1561 gtatgctggg accaatggta tccggaggcg gcgcgactga ccgcattgcg cggcgcagag
     1621 attatttttt atccaacggc aatcggctgg catccgagcg agaaaaagga atttggaaaa
     1681 gcgcaacatt ccgcgtggga gacgattcag cgtggtcatg cgatcgccaa tgggtgctac
     1741 gtcgcggtgg cgaaccgcgt cggtcacgaa gcgcccgccg gtggagatgg cattgaattt
     1801 tggggtcaaa gtttcgtgtg cgggccggac ggcgaaatca tcgcgaaagg ttcgatcgac
     1861 caagaagaga ttgtgacggc ggagatcgat tgggctcgcg tcaacgagca tcggacgcac
     1921 tggccattct tgcgagatcg cagaatcgat gcgtacagcg agatcaatcg acgtttgatc
     1981 gattgaaagc gccggagcac cggcgcactc caaaacgcaa gcgcatgtgg ggcgtgggat
     2041 tggcggccac gttttggagt gcggcgctgc tgcgccgctt tggacaagac gaagggcgcc
     2101 acagcttcag acaaagtgcg aactgaaacg tctgctgtta tgaatttgtc tttgtggtaa
     2161 tacgagggcg atgaccgcaa acgctgctca accgaggcgc cgtccttggt atcgcccgtc
     2221 gttgacggtg caaatcatga tcgggctcgt tgtcggcggc gtgattggat ggctgcggcc
     2281 cgattggggc aatgcagttt attttttgcg cgatattttc attaacctga tcaaatcgat
     2341 catcgcgccg cttgttttct cgaccatcgt ggtgggcatc gcaggcgccg gtgcgctgcg
     2401 gaatgtgggg cgcatgggaa tcaaggcgct gatctatttc gagatcgtca ctacggtcgc
     2461 gctgttcatc ggattggcca ttgtgaatct cactaagcct ggtgtcgggg tgactctcga
     2521 agtgacgaac acgtccgcca tccagtccat tgagcacact catccgaagt ctttggtcga
     2581 aaccatcgtg cacgcatttc cgtccagcat catcgaagcg atggttcgtg gcgacgtttt
     2641 gcagatcgtt gcgttcagtg tgctgttcgc gctcgcggtg tcagcagttg gcgaaaaagg
     2701 caaaccaatc gtccgcgcca tggagagcct ttcccaagtc atgttcaagt ttaccaatta
     2761 cgtgatgatg tttgcgccga ttggcgtcgg cgcggcgatg gcgcacacga tcggcacgca
     2821 aggattgggc gtgctgaaaa atctgggggc cttggttctg tcgctttacc tggcgctgat
     2881 catctttgtc gtgctcgttt ttgggttggt cattctcatc gcacgcgtgc cgttgcaaca
     2941 gttcgtgcgt gcagtgcgcg agccggcggt gctggcattc gccacgacca gtagcgagtc
     3001 ggcgctgcca aaagcaatgg aatcaatgga gcgcctcggg gtgccacggc ggatcgtcgg
     3061 atttgtgatg ccgaccggct actcatttaa cctcgacggc tcgacgctgt acctggcaat
     3121 ggcgtcggtg ttcgtagcgc aggcggctga agccacgacc ggtcagcaca tgggatggga
     3181 ccggcaaatc gtgatggtgc taacgctgat gatcacatcg aaaggggtg
//
LOCUS       DATDAJ010000065         3571 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_384844, whole genome shotgun sequence.
ACCESSION   DATDAJ010000065 DATDAJ010000000
VERSION     DATDAJ010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3571
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384844"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            618..851
                     /locus_tag="VIS53_01540"
     CDS             618..851
                     /locus_tag="VIS53_01540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766495.1"
                     /translation="MLRKEAIWIEIFENDRGVGRFGYVVGIWGLCATQRGDATTTKKE
                     LRKIASGTQQFVVGHLAQKARSFFGLAFFLQNE"
     gene            complement(861..1409)
                     /locus_tag="VIS53_01545"
     CDS             complement(861..1409)
                     /locus_tag="VIS53_01545"
                     /inference="COORDINATES: protein motif:HMM:NF019932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5766496.1"
                     /translation="MGSVLSVIRHVTMICVGTLPASWFVKYDRHMLRTITLFLALSAA
                     AFGQNSAKDEAQIWELEKGYWEYVKANDLEKYRALWHENFVGWPFVSPAPVRKDHITD
                     WITSNTSKGIKLQSYSIEQLAIQITGDIAMDYYRINATWADETGAEVRTDRMRITHTW
                     IRTHGTWQIIGGMSSPVNPEGQ"
     gene            complement(1461..>3571)
                     /locus_tag="VIS53_01550"
     CDS             complement(1461..>3571)
                     /locus_tag="VIS53_01550"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5766497.1"
                     /translation="GEPERLEGRRVSANLFELLGVPVLLGRAFVPDDDKPGTRVVLLS
                     YSLWQRRFGSDPAVIGRALTLNGESYTVVGVMPRLVQLPGYENVNDQLWVPIAFPPEE
                     AAQRGNHFLEVIARMKPGITLKQAQAEMETISARLAQQYPDYNTRIGAVVVPLHEQVV
                     GDIKPALLVLLGAVGFVLLIACANVANLLLARAAVRQKEIAVRLALGASQSRLIRQFL
                     TESVLLAMFGAGLGLLLAVLGLRALRTFIPANISQMDTINIDARVLIFTALIAVVTGI
                     AFGLAPAIHGSHLNLNDTLKEGGRDSAGGSKGNRVRSLLVIGEVAISFVLLIGAGLLI
                     NSFFHLRNLDPGFRADHLLTMKVDLSEVKYPDRERRAAFFDEVTRRVHELPGVQSAAV
                     ADNLPLTFNGNSMTIGVEGVTDPPPGQRPDVIFRAIGPGYFKTMGIPIVGGRDFTDQD
                     KPDSKDVVVISEKTAQHFWPGQDPIGKRLKPGSSTSKSEWREVIGIVKDVRQNDLIAP
                     PKMQMYFSYRQPKEIAANALVVRTTVEPMSLAGSVRNAIWSADKDQTVADIDTMDHIV
                     GEAVARQRFSMVLLGVFAALALLLASVGIYGVMSYSVAQRTREIGIRMALGALRADVL
                     HMTVRQGLKLVGAGMVLGLGAAFLLTRLMASLLYGISATDPITFIGISVVLLAVAILA
                     SYVPALRATKVDPITALRAQ"
BASE COUNT          839 a          973 c          967 g          792 t
ORIGIN      
        1 cttcgtctac attcatggca ccaaacacga gcacaaagtc ggcacggctg cgagccacgg
       61 ctgcgtgagg atgcgtaacg aggatgtgat cgaattgttc gaaatggtcg atgaaggtac
      121 gccggtcgtc atcgaggagt gactcgaaag gctctaaaca cgaagatcca ttaggcttgt
      181 catcctgagc gcgagcgaag gatctcggtt taattctcgc aagccacaaa cgaacatgga
      241 tcagagatgt ttcgcttcgc tcaacatgac aggacgatgg ggcttggaaa ttgagttttg
      301 ggatttcccg gcaagatccc gggcaataca tccaaagaac ttgacaaaaa cgttgttgtc
      361 cgtgtgtgat cctacacgcg cagtgcagct tgcaacgaaa ggaggcgata tagattgaaa
      421 ttgataaagg cgattatgat cgtggccgtt ttggccactg ctttgagctt tggtgcttgt
      481 gctcaaagga aggagactgt caccacaagc gcagggacaa ctgcctattc gaaataaggc
      541 cgtcggccgc ggggctcaaa aaacttaaga aaagcattgc ttcccttggg ttccctgcct
      601 aaacagaccg gagcaacttg ctgcgaaagg aggcgatttg gattgaaatt tttgaaaatg
      661 atcgtggtgt tggccgtttt ggctacgtcg ttgggatttg gggcttgtgc gcaacacaaa
      721 gaggtgatgc caccaccaca aaaaaagagc tacggaaaat agcctccggt acccagcaat
      781 ttgttgtggg ccatctcgcc caaaaggcca ggtcgttttt cggcctggcc ttttttcttc
      841 aaaacgaata aattcgtttg ctactggccc tctggattca cgggcgagga catgccgccg
      901 atgatttgcc acgtgccgtg cgtccgaatc catgtgtgcg tgatccgcat tcggtcggtc
      961 ctgacttcgg cgcctgtttc atccgcccac gttgcgttaa tccgataata atccatcgcg
     1021 atatcgccgg ttatctgaat ggcaagctgc tcgatcgagt acgactggag cttgattcct
     1081 ttggacgtgt tcgaagtaat ccagtcggtg atgtgatcct ttcgtacggg tgcgggactg
     1141 acaaatggcc agccaacaaa attctcgtgc cacagcgcgc gatacttttc caagtcgttg
     1201 gctttcacgt attcccaata ccccttttcc aattcccaga tctgcgcttc gtccttcgct
     1261 gaattttgtc cgaaagcagc cgcacttaac gcgagaaata aagtgatggt tcgcaacatg
     1321 tgccgatcat atttgacgaa ccaggaggcc ggcaaggttc caacacaaat catggtgacg
     1381 tggcgaatca ccgataaaac cgaccccacc tggaactccg cagcaggtgc gcgccggcta
     1441 aacgctcgct ccgaatgcct ctactgtgcg cgtaacgcgg ttatcgggtc gaccttcgtc
     1501 gcgcgaagcg ccggaacgta gctggcgagg attgcgaccg cgagcagcac cacagagatg
     1561 ccgatgaacg taattggatc ggtcgcactg atcccgtaaa gcaaagacgc catgaggcgt
     1621 gtcagaagaa atgccgcgcc taatccgagg accatacctg cgccaacgag tttgagtccc
     1681 tgccggacgg tcatgtgcaa aacatcggct cgcagcgcgc cgagcgccat gcgaatgcca
     1741 atctcgcgag ttcgttgcgc gacggagtag ctcatgacac cgtaaattcc aactgaggcc
     1801 agcagcagtg ccagtgccgc gaacacgcct aacaaaacca tgctgaagcg ttgccgtgcg
     1861 actgcttccc cgacgatgtg atccatcgta tcgatgtctg cgacggtttg atctttgtcc
     1921 gccgaccaga tcgcgttacg caccgatccg gcgaggctca tcggctcgac agttgttcgt
     1981 accacaagcg cgtttgccgc gatttctttc ggctgccgat acgagaagta catttgcatc
     2041 ttcggtggag cgatcaggtc attttgtcga acgtctttga cgattccgat cacctctcgc
     2101 cattcgcttt tcgacgtact cgagccgggt ttcagtcgtt tgccgatcgg gtcctgtccg
     2161 ggccagaaat gctgggcagt cttttcacta attacgacaa catctttgga gtcgggtttg
     2221 tcttgatcgg tgaaatcgcg gccaccgacg attggaatgc ccatcgtttt aaagtaacca
     2281 ggtccgattg cacggaagat aacatcgggt cgttgaccag gcggcgggtc tgtcacccct
     2341 tctacgccaa tcgtcatgga attgccgttg aatgtgagcg gcagattatc ggcgaccgca
     2401 gccgattgca ctcctggcag ttcatggacg cgtcgcgtca cctcatcgaa gaatgctgcg
     2461 cgtcgttcac ggtcgggata cttcacctcc gaaagatcca ctttcatcgt caggagatga
     2521 tcggcacgaa acccgggatc aagattccgt agatgaaaaa agctgttgat caaaagcccg
     2581 gcgccgatca gcagcacgaa ggaaatggcg acctcgccga tcaccaacag gcttcgaact
     2641 cggtttcctt tgctgcctcc ggcggaatca cggccgcctt ctttcaacgt atcgttcaaa
     2701 ttcaaatgtg atccatgaat ggcgggcgcg agaccgaacg cgatgccagt caccacagcg
     2761 attaatgccg tgaagatgag cactctggcg tcgatattga ttgtatccat ctgcgaaatg
     2821 ttcgcgggaa tgaatgttct aagtgcgcgg aggccgagga ctgccagcag caaacctaat
     2881 cccgcgccaa acatcgcgag taacacgctt tccgttagaa actgccggat gaggcgcgac
     2941 tgactggcgc cgagtgccag gcgcactgca atctcctttt gccgaacagc agcgcgtgca
     3001 agcaacagat tggcaacatt cgcgcaggca atgaggagta caaatccgac tgctccgagc
     3061 aaaaccagaa gcgccggttt aatatcgccg acaacctgtt cgtggagcgg aaccacgacc
     3121 gcgcctattc gcgtattata atccggatac tgctgcgcaa gacgtgcgga gatcgtttcc
     3181 atctcagctt gcgcctgctt tagagtgatg ccgggtttca ttcgcgcgat cacttcgaga
     3241 aaatgattgc cacgttgcgc ggcctcctcc ggcgggaacg ctatcggcac ccatagctga
     3301 tcgttcacgt tttcgtagcc aggcaattgc accagccgcg gcattacacc cacaactgtg
     3361 tagctctcgc cgttgagcgt aagggcccgg ccaataacgg ctggatcgga gccgaagcgc
     3421 cgttgccaca gtgagtaact gaggagaaca acgcgcgtac cgggcttgtc gtcatccggc
     3481 acgaatgcgc gtccaaggag gaccggtaca cctaacaact cgaagagatt tgcagaaaca
     3541 cgacgccctt cgagccgttc gggttcgcca a
//
LOCUS       DATDAJ010000066         5884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_406277, whole genome shotgun sequence.
ACCESSION   DATDAJ010000066 DATDAJ010000000
VERSION     DATDAJ010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5884
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406277"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..751)
                     /gene="pgl"
                     /locus_tag="VIS53_01555"
     CDS             complement(53..751)
                     /gene="pgl"
                     /locus_tag="VIS53_01555"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEY5766498.1"
                     /translation="MSAAPTVIRTNNFVADAAALILEQGRKAIAERGEFTIALSGGNT
                     PAPVYARAAMDAHDLPWRSVRFTFGDERCVPPDDPQSNFRMARENLFVPAAVPEKSIM
                     RMRGEIDPPIAAQEYEDQLNAIATEGGEQIYQHDLILLGLGDDGHTASLFPGTAALDE
                     MSHRVVANFVPKLNAWRLTFTYPLINHARHILFLVGASKNPRLIERVLAGDRQFPAGR
                     VDPSAGEVTWMIGE"
     gene            complement(764..1234)
                     /gene="msrA"
                     /locus_tag="VIS53_01560"
     CDS             complement(764..1234)
                     /gene="msrA"
                     /locus_tag="VIS53_01560"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR00401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY5766499.1"
                     /translation="MEKATFGAGCFWGVEESFRNLKGVLSTSVGYAGGTQENPTYQDV
                     CTDKTGHAEVVEVEFDPSQVTYDELLDVFWSNHNPTTLNRQGPDVGAQYRSVIFYHSP
                     DQQASANASKQRLEKSGRFNRPIVTQVEPAPTFWRAEEYHQHYLQKRGQAHCAV"
     gene            1387..2667
                     /locus_tag="VIS53_01565"
     CDS             1387..2667
                     /locus_tag="VIS53_01565"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY5766500.1"
                     /translation="MNDSATTVQQIRPQLPVRLFNGFGALLEKSRIPSTRMVATDLIE
                     TAKRRCRLDNFGQGDFFEALSRLLESSQDEARLNLIGKIALKTDVLETLCARLKMERD
                     RQLYPNIAHQEIREPVFIVGLPRSGTSLLHRLLSADPEHRCPLMWEVRSPSPPTRAHE
                     TRRIQRATQSCNFFNWLVPTFRHAHAIGAEVPQECVSLMTPTFLSDQFDAMYYVPSYR
                     AWFFRQNLQPAYEYHRRFLQQLQFRRFARRWILKAPTHMFAMPALLSVYPDALFVQTH
                     RTPVDSMASVSSLVTILRSAFSDAVDSATVSREAIHYWSETMKKFLPERDRLANNRIC
                     DIQYDEICREPIRAVRRIYEHFGWSLSREAERRMRVLVASQDKRQSANHRYDLSQFGS
                     SSEEVFGVFETYCQRFGLAQPSGAQQKQAARSVA"
     gene            2692..3003
                     /locus_tag="VIS53_01570"
     CDS             2692..3003
                     /locus_tag="VIS53_01570"
                     /inference="COORDINATES: protein motif:HMM:NF019589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766501.1"
                     /translation="MTFEAIRLIRADHPSLPGHFPGTPLVPGVVILDEVIAALAEWRR
                     NSQLNGIRMVKFLAPLKPEQAFTISLSLRNEHGGEVNFCCRAEERVIVEGQLEVAWGA
                     E"
     gene            3008..4225
                     /locus_tag="VIS53_01575"
     CDS             3008..4225
                     /locus_tag="VIS53_01575"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5766502.1"
                     /translation="MKAPLLDAPKFETGLSDPRLAECLKEFPSSIFSERLYQSIELME
                     RYSIELAVDLLGQLNLAEQLGTWRSADELCSALGFQPHFRLPLHWILTRLVETGCVEV
                     QSDSGARSYRLRKTPWQPDLKCLRALALNIDPGNAATLDLLDHAASLYESVATGEKSG
                     DQNLLGPQGVPLWLNYFRNDNLTYAVNNWVGGIAAADRLYSRPTLRVLEIGAGTGSAT
                     EILLTLLGERDLFPRLERYVVTEPNAYFRRCNQRKLAAQYPNLPLEWTTVDVDLPWSE
                     QGIAPGAFDLVYAVNVMHISKNLLFSLNEARSALAASGWLVIGDCVRPYDHQPMYPEL
                     MFQILDSFTNVETDSEIRPNPGFLTAEQWRRAFSRAGFPCIEIAPDIERIREIYPHFF
                     TGAICGQNTGTAK"
     gene            4222..5142
                     /locus_tag="VIS53_01580"
     CDS             4222..5142
                     /locus_tag="VIS53_01580"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766503.1"
                     /translation="MISEIVSPKHSDADRWVSVPERGTPASLGVIAWIAERVGRPLAR
                     LLLFPITIYFLITAHTARRASYEFLKRARGGSAHWWNVLRHFYYFAATILDRFYLLRG
                     EFDRFCVTIHGKELLQRQHENGKGCILVGSHLGSFEVLRALGVMQRGFSLKVLMDTAH
                     NQNISRFFDGLNPTIADTVIAPDRPDTLIRARESLDAGCFVGMLGDRVFGADKTTRCD
                     FLGAPATLPAGPIWLAAMMHCPVILFFGLYRGGNRYDIYFEQFADEIVLNREHRTEEI
                     QSWMQRYAARLEHYARLAPYNWFNFYSFWE"
     gene            5316..5747
                     /locus_tag="VIS53_01585"
     CDS             5316..5747
                     /locus_tag="VIS53_01585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766504.1"
                     /translation="MPINKAEIRTLIPHSDLMCLVDEVVQWDDRSIACVSNTHRDPAN
                     PLRRQGRLSAVHAFEYGAQAAAVHGGLQARAVGTIAPSGYLAALRDGRLHVTRLDYIH
                     LPLRISATRLYGEGANTVYEFILSAAAVLVAEGRVTIVQRA"
BASE COUNT         1284 a         1616 c         1634 g         1350 t
ORIGIN      
        1 cccgtagtaa gggagaggcg gaaaacgaca ctgaacaggc acaatgcgag tgctactccc
       61 caatcatcca tgtcacttct cctgctgaag gatctactcg cccagcggga aattgccggt
      121 cgcccgcgag cacacgctcg attagccggg gatttttcga tgcgccgacg agaaacaaaa
      181 tgtgccgcgc atgattgatg agggggtatg tgaacgtcaa gcgccacgca ttcaatttag
      241 gaacaaaatt tgccacgacg cgatgcgaca tctcgtccaa cgcggcggtc ccgggaaaga
      301 gcgacgccgt atggccatcg tcaccgagac cgagaagaat caaatcgtgt tgataaattt
      361 gctcaccgcc ctcggtggcg atggcgttca gttggtcttc gtactcctgc gccgcgattg
      421 gcggatcaat ttcgccacgc atacgcatga tcgatttctc aggaacagca gcaggaacaa
      481 aaagattttc tcgcgccatt ctgaagttgc tttgcggatc atccggcggc acgcaacgct
      541 catccccgaa cgtgaaacgg accgacctcc atggaagatc atgcgcatcc atggcagccc
      601 gggcgtaaac cggcgccgga gtgttcccac ctgagagcgc gatcgtaaat tcgccccgct
      661 ccgcgatagc tttgcgtccc tgctcaagaa tcaaggcagc ggcgtcagca acaaaattat
      721 tagtgcggat gactgtcgga gcagcgctca cgctggttcc caatcaaacg gcgcaatgcg
      781 cctggccgcg tttctggagg taatgctgat gatactcttc agcgcgccag aacgtcgggg
      841 cgggttcgac ctgcgtgaca attggacgat tgaaccggcc gctcttttca agtctttgtt
      901 tcgaagcatt ggcggaggct tgttggtcag gggaatgata aaaaatcacc gatcgatact
      961 gcgcgccaac atcggggccc tgccggttta gcgttgtggg gttatggttc gaccagaaaa
     1021 catccagcag ttcgtcgtag gtcacctgtg acggatcgaa ctccacctcc acgacctcgg
     1081 cgtgcccggt cttgtcggta caaacatcct gatacgtcgg attctcctgt gttccccccg
     1141 catatccaac gctggtcgac aaaacacctt ttaggttgcg aaaactctct tccactcccc
     1201 agaaacaacc tgcaccgaaa gtagctttct ccatttgcat gcggacacga tgaaacgatt
     1261 acactacgtg cgcaacaaaa tgcttgtcgg caatcgttgc ttgacatgga agtctcgctc
     1321 tcgtttgcat attacgtcca atagcggtcg attgagatcg ctgccaccgc aaatgccttg
     1381 accgtaatga acgattctgc cacgaccgtt cagcaaattc gtccgcaact gcctgtacgg
     1441 ctcttcaatg gatttggagc gctgctggaa aagagtcgaa ttccatcgac gcgaatggtt
     1501 gcgacggact tgatcgagac tgcaaaacga cggtgccgcc tcgataattt tggccagggc
     1561 gatttttttg aagcgctatc gcgattgctt gaatcatctc aggacgaggc ccggctcaac
     1621 ctgatcggaa aaatagcgct gaagactgat gttctggaga ctttgtgcgc gcgtctgaaa
     1681 atggaacggg accggcagct gtatccaaac attgcacacc aggaaatccg tgaaccggtt
     1741 tttatcgtgg ggctgccgcg cagcggcacc agcctgttgc atcgcctgct ctccgcagac
     1801 ccggagcacc gatgtccgtt aatgtgggaa gtgagatcgc cgtctccacc tacgcgcgcc
     1861 catgagacac gccggattca gcgagcgacg caaagctgta acttttttaa ctggctcgta
     1921 cctacattcc gccacgcgca cgcgatcggc gcagaagttc cgcaggagtg cgtcagcctc
     1981 atgactccga catttctgag cgatcagttc gatgcgatgt attatgtgcc gtcatatcgc
     2041 gcctggttct ttcggcagaa tttgcagccg gcatacgaat atcaccgtcg ttttcttcaa
     2101 cagctgcagt ttcggcgatt cgctcgtcgc tggatcctga aagcgcctac tcacatgttt
     2161 gccatgccgg cgttgttgtc cgtttatccg gatgcgctgt tcgtgcagac ccaccgaacg
     2221 cccgtcgatt cgatggcctc cgtctcaagc ctggtgacga tccttcgcag cgcgttcagc
     2281 gatgccgttg attcggctac ggtgtctcgg gaggcaatcc attactggtc cgaaacgatg
     2341 aaaaagtttt tgcctgaacg cgatcgcctg gcaaacaatc gcatctgcga cattcaatat
     2401 gatgagattt gtcgtgaacc aattcgcgca gttcgccgga tctacgaaca tttcggctgg
     2461 tcattgtctc gggaagcaga gcgacgcatg cgcgtactcg ttgccagcca ggacaaaagg
     2521 caatccgcca accaccgcta tgatctatcg cagtttggtt cctcctccga agaagtgttc
     2581 ggcgtgttcg agacgtattg ccagcgattc ggtttagctc agccaagcgg tgcgcagcag
     2641 aagcaagcag cgcgttcggt cgcctgatcc gatgcaagac acaattcgcg gatgactttt
     2701 gaagctatcc gtctgatccg cgctgatcat ccgagtttgc cgggacattt tccagggacg
     2761 cctctggtgc cgggagtagt aattctcgac gaagtgattg cagcgctggc tgaatggcgg
     2821 cgaaactcgc agctcaatgg catacgaatg gtgaaattcc ttgcgccact caagccggag
     2881 caggcattca cgatttctct ctccctgaga aatgagcacg gtggggaggt caatttttgc
     2941 tgtcgcgcgg aagaacgcgt aatagtcgaa ggtcaacttg aagtcgcctg gggagcagaa
     3001 tgagtcgatg aaggcgccct tgcttgacgc tccaaaattt gaaaccggac tgagcgaccc
     3061 acgccttgcc gagtgtctca aagaatttcc gtcctcgata ttcagcgagc gcttatatca
     3121 gagcatcgaa ttgatggaac gctacagcat cgaactggct gttgatttgt taggccaatt
     3181 gaatttggca gaacaactcg gcacgtggcg atcagccgat gagctttgca gtgctctcgg
     3241 ttttcagccg catttcaggc ttcccttaca ttggatcctg acgcgcctcg tagaaaccgg
     3301 ctgtgtcgag gtgcaaagtg atagcggggc gcggtcctat cgcttacgga agacgccatg
     3361 gcaacctgat ctcaaatgct tgcgcgctct cgcgctcaac attgatcccg ggaacgcggc
     3421 gaccctggat ttgttagacc atgccgcaag tctttatgag agtgttgcga ccggtgaaaa
     3481 aagcggcgat cagaatctgc tcgggcctca aggcgtcccg ctgtggctca actattttcg
     3541 caacgacaat ctgacctacg cggtaaacaa ctgggtgggt ggtattgcag ctgcggaccg
     3601 tctttactct cgaccgacgc tacgagttct tgaaatcggc gccggcacgg gcagcgccac
     3661 ggagattttg ttaacgctac tcggtgaacg cgaccttttc ccgcgacttg aacgctacgt
     3721 cgttaccgaa ccaaacgcat atttccggcg ctgcaatcaa cgcaaattgg cggcgcaata
     3781 cccgaacctc ccgctggaat ggacgacggt cgatgtcgat ttgccgtgga gcgagcaagg
     3841 gattgccccg ggagcattcg atctcgtgta cgctgttaac gtgatgcaca tctcgaagaa
     3901 tcttttgttc agcttgaacg aagcgcgctc ggcgcttgct gcgagtggtt ggctcgtcat
     3961 cggggattgc gtgcgacctt acgaccacca gccgatgtat cccgaactca tgtttcaaat
     4021 tctggacagt ttcaccaatg tggaaacaga ttcggaaatc cgtccaaacc ctggctttct
     4081 aactgccgaa cagtggcgtc gcgctttttc gcgagccggc tttccgtgca tagaaattgc
     4141 gcccgatatc gaacgaatcc gcgagatcta cccgcatttt ttcaccggcg ccatttgcgg
     4201 acaaaacacg ggaaccgcaa aatgatttcg gaaattgtca gccccaagca ttcggacgca
     4261 gatcgctggg tgagcgtgcc tgagcgcggc acacccgctt cactgggagt gatcgcctgg
     4321 atcgcggaac gcgtcggtcg gccgctagcg aggctgttgt tatttccgat cacaatttac
     4381 ttcctgatca cggcgcatac tgcgcggcgg gcctcttacg aattcctgaa gcgggcgcgc
     4441 gggggttcag ctcattggtg gaacgtgttg cgccattttt attatttcgc cgctacgatt
     4501 ctagaccgct tttatttgtt gcgtggtgaa ttcgaccggt tctgcgtcac aattcatggg
     4561 aaagaactgt tgcagcgtca acatgaaaac ggcaagggtt gcatcttggt aggctcccac
     4621 ctgggcagtt tcgaagtgtt acgggcgctc ggggtgatgc agcgaggctt ttcgcttaag
     4681 gtgctaatgg acactgcgca caaccagaat atcagccggt ttttcgatgg gctaaatccc
     4741 acaattgcgg acacggtgat cgcacctgac cgaccggata cattgatcag ggccagggaa
     4801 agtctggatg cgggctgctt cgtcgggatg ttaggcgatc gcgttttcgg cgccgacaag
     4861 acaacgcgct gtgacttcct tggcgcgcct gccacgttgc cagccggccc gatttggctt
     4921 gctgctatga tgcattgccc cgttattttg ttcttcggcc tctaccgcgg cgggaatcgc
     4981 tacgacattt acttcgaaca attcgctgac gagatcgtgt tgaatcggga gcatcgcacc
     5041 gaggaaatcc agtcgtggat gcagcgctac gccgcgcgac tggagcatta tgcacggctg
     5101 gcaccttaca actggttcaa cttttattcg ttctgggaat aggcttggcc ttgtgaaggg
     5161 ttgaaaaaat tgaagcgata aagcagtcat cctgagcgaa gcgcagcgga gtcgaaggat
     5221 ctcgtggcgc tatcgtcagg taacgcaacg ggattcctcg acttcgctcg gaatgacaga
     5281 ctcgccaccc gttgagcaaa tcatcgcgta acaacatgcc gatcaacaaa gcggaaattc
     5341 gcacgctgat cccgcactcc gacctgatgt gtttggtgga tgaagttgtg cagtgggacg
     5401 atcgatcgat cgcgtgcgtc agcaatacgc atcgtgatcc ggcaaaccca ttgcgccgtc
     5461 aagggcgttt gtccgccgta catgccttcg aatatggtgc gcaagcggcg gctgttcacg
     5521 gcgggttgca ggcgcgcgct gtgggtacga ttgcgccttc cggatatctg gctgcgttgc
     5581 gggacggacg cttacacgta acacgactag attatattca tttgccgctc cggatttcgg
     5641 cgacgcgtct ttacggcgaa ggcgcaaaca cggtttacga gtttatcctt tcggccgcgg
     5701 cggttctggt agcggaaggc cgggtgacca tcgtgcaacg tgcgtgaggg tgcgctgaac
     5761 acagcgcacg cgacagcacg tagcgaagct gtagtgtccg ctgtcctcag cggatttcac
     5821 gcctcacatc gcgatgccgc catcgacaca cagcacttgg cccgtaatgt aagcggcttc
     5881 tggc
//
LOCUS       DATDAJ010000067         5037 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_409228, whole genome shotgun sequence.
ACCESSION   DATDAJ010000067 DATDAJ010000000
VERSION     DATDAJ010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5037
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409228"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="VIS53_01590"
     CDS             complement(<1..603)
                     /locus_tag="VIS53_01590"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5766505.1"
                     /translation="MRKWIVFFSAIAIAVTAQSISVAASDAEWDRTVLPRPPQPFEGV
                     TKRTLEGSVASFTQPVKAPADAPNILLVLIDDAGFGNSATFGGPVATPTFDKLAAEGL
                     RYNRFHVTALCSPTRAALLSGRNHHAVGFGSIAEIPGGWPGYNTTWPTSAASIAKILQ
                     ANGYNTAAMGKWHLTPDTQQGPAGPFDRWPNALGFDYFWGF"
     gene            complement(1219..2025)
                     /locus_tag="VIS53_01595"
     CDS             complement(1219..2025)
                     /locus_tag="VIS53_01595"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5766506.1"
                     /translation="MVTTNIADASGVRVHEISKSFPVPDAPSTSRLALGGISFSIAAS
                     ELVSLVGPSGCGKSTLLRLIAGLDVSDSGELLVGNEKIVGPSAERGLVFQDPNLFPWL
                     TVRRNIEAGLAARGVLREKRNEVDEFMRLVGLEAFANAYPHHLSGGMAQRVALARALI
                     NHPKVLLLDEPLGALDAFTRMRMQDEVLRLWENRRTTMLLVTHDIDEAIYMSDRILIM
                     TQAPGRIDREIDIDLARPRDRTSDSFLRFRSAILEHLHFAGKATPNSSRC"
     gene            complement(2019..3020)
                     /locus_tag="VIS53_01600"
     CDS             complement(2019..3020)
                     /locus_tag="VIS53_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY5766507.1"
                     /translation="MTSIRRVMNADTTVPDKPSQLPWPMQLAVPVASLITFGTHLLIA
                     KKAPPLETHSYMLLFWEILGVSIALAIAQRFWPALRKWMRHMWPIFTAAILLLGVWDV
                     ITAGLRLLPLPYFPAPAAVLRSLISDRGLLLDSTWHSLVLLLSGYTLGVIIGLVSGVC
                     IGWSSSVRYWGMPVLKVVGPIPATAWIPLAMVVAPSAIVSAAGLVALAVWFPVTMLTA
                     SGISNTRASYLDVARTLGAGRLYLIFRVAIPAAVPNIFIGLFMGLGASFLTLVVAESV
                     GVKSGLGWYLSWAQGWAEYGKVFAALIIMAAFFSTVMTLLFKLRDRVLVWQKGIIKW"
     gene            complement(3127..4320)
                     /locus_tag="VIS53_01605"
     CDS             complement(3127..4320)
                     /locus_tag="VIS53_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY5766508.1"
                     /translation="MTSKLFLVAISLSLVAVAGCNKKSGSTVQNSNKVRVGYIGLTCE
                     APIYAAYEKGFFKEEGLEPELVKCNWSTYKDALALGSYDITHHLVMYFLKPIEQGLDV
                     RFLAGIHRGCLRVQAGVKTNIHTVEDLKGKRIGVPGMGTPPFVFANRVFGVHGIDAGK
                     DVTWKVFPAGELGLAIDKGEVDAVANAEPIGSLLIAEGKVRNVADQIEDAPYKDEYCC
                     EVIANGKWVDANPDTAARATRALLKGAKWVETNPRAAAIMAVEKKYLASTPELNTVAL
                     ARLRYIPSVQLAEESVQSAGREMKVAKMLSPETDTEALAKRAFMHLPGVTDEWIKTIE
                     VEKIAGAQVSPDEDIRLIAALIQKDSGDSCCRRKMFDQPDQDAPNLADPDAPCLGKNV
                     IAGQD"
     gene            4441..>5037
                     /locus_tag="VIS53_01610"
     CDS             4441..>5037
                     /locus_tag="VIS53_01610"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY5766509.1"
                     /translation="MSEPLDIRHLRYFLAVAEAGSFSRAADRLGISQPSVSQQMRDLE
                     TGLRVPLFQRRGKRILLTPQGLIFQEHARALLHQLENLLHELNGEPGELRGALRLGVI
                     PVLNVPLIPQLLGAFVADHPAISVTVEEISSTEIETALEEGRMDVGLGFLTRHSPNLS
                     YERLCTDQFALIVAQNHPWAKRRVVDFPKLHQQRLLQLP"
BASE COUNT         1143 a         1448 c         1344 g         1102 t
ORIGIN      
        1 aaatccccag aaataatcga agccgagcgc gttcggccag cgatcgaaag gcccggctgg
       61 tccttgttga gtgtcgggtg tcaggtgcca cttgcccatc gcagcggtat tgtagccgtt
      121 ggcctgaaga atcttcgcga tcgatgccgc gctggtgggc caagtcgtgt tgtacccggg
      181 ccaaccgccg gggatttcag caatcgatcc gaatcccacc gcatgatgat tccgtcctga
      241 tagcaacgcg gcacgcgtgg gcgagcaaag tgctgtgacg tggaaccgat tgtaacgcag
      301 tccctcggcc gcgagtttgt cgaacgtcgg cgtagcgaca ggtccgccga acgtagccga
      361 atttccgaac cccgcatcat cgatcaacac gagcagaatg ttcggcgcat ctgccggggc
      421 cttaacgggt tgggtaaacg acgctacaga tccttcgagc gtccgtttgg taacgccttc
      481 aaatggctgc ggcggacgtg gtagaacggt tcgatcccat tccgcatctg aagccgccac
      541 tgatattgat tgagctgtga ccgcaatcgc gatcgcgctg aagaagacga tccattttcg
      601 catcctgatt ccctcctgaa cccgcgaggg tatacgagag gcttcgaaag cacacgccaa
      661 aaaacgcgca atcaacgaca aggtctaaag aatctcgcgc cgaagccacc acgctattcg
      721 tgcatctgga ctagagcgcc ggagtcgtcc aatactcgga taattgcccg ctgcgagcga
      781 gactgggagc gatacttcgc gtatgcgatc gcataacgga ccgcatcagg ccctgcatac
      841 cagatcgggc cgtatcgaag cagctcactg attagatcaa agccatctct gtccttgcgc
      901 ggacgaacct cgtaaaggtc gtgactcccc aaccctgggc ttctctgttt tggatacatg
      961 gcttccatac gtgttatctc tccctgttat ctttcaaacg aatttgcagc gataaaagag
     1021 acaattctgt tacttttttg agacgcagtg ctcagtcgga tttggtgctt ttcgatcacc
     1081 gccccatacg accttttctt agaccgagag gtccttcgga ccgtacgcgc ggtcactgga
     1141 agtcaggcag cttgcctgac tcggctggca cgctgccagc ctgccgagac aaacctggca
     1201 ggttatcttc ctaatccttc agcagcgaga ggaattcggg gtggctttgc cggcgaaatg
     1261 cagatgttcg agaatcgcgc tgcggaagcg gagaaatgaa tcgctggtgc gatcgcgcgg
     1321 ccgcgcgagg tcgatatcga tctcgcgatc gattcgcccg ggcgcctggg tcatgatgag
     1381 gatgcgatcg ctcatgtaga tcgcctcatc aatgtcgtgc gtcacgagca gcatcgtggt
     1441 gcgccgattt tcccacagcc tcagcacttc atcctgcatg cgcatccgcg tgaaagcgtc
     1501 gagcgcgccg agcggttcat cgagcagtag aaccttggga tgattgatga gggcgcgcgc
     1561 aagcgcaacg cgctgggcca tgccaccgga aaggtgatgc ggatacgcat tcgcaaacgc
     1621 ctcgagtccg accaaccgca tgaattcgtc aacttcattc cgtttttcgc gcaacactcc
     1681 acgtgcggca aggccggcct caatattgcg gcggacagtc agccatggga acagatttgg
     1741 atcttgaaaa acgagaccac gctccgcgct cggtccgaca atcttttcgt tgccgacaag
     1801 cagctcacct gaatccgaaa catccaagcc ggcgatgagt cgaagcaatg tcgactttcc
     1861 acaaccgctc ggcccgacta acgaaaccag ctcgctggcg gcgatggaaa aggatatgcc
     1921 gccgagagcg agccggcttg tgctcggtgc gtctggtact ggaaaacttt tggagatttc
     1981 gtgcacgcga acgcctgacg cgtccgcaat attcgtcgtc accacttgat tattcccttc
     2041 tgccagacca gaactcgatc gcgcaatttg aacagcaaag tcatcactgt agagaagaag
     2101 gctgccatga taatgagcgc ggcaaaaacc ttgccgtatt cggcccagcc ttgggcccaa
     2161 ctaagatacc aaccgagacc ggatttaact cctacagact ccgccacgac cagagttaga
     2221 aacgaagcac ccagtcccat gaacaaaccg ataaagatgt ttggaactgc ggctggtatc
     2281 gcgactcgaa atattagata aaggcgtcct gcgccgaggg ttcgagctac gtcgaggtag
     2341 gatgcgcgcg tattggaaat cccagaggcg gtcaacattg taactgggaa ccacaccgcc
     2401 agcgcgacta atcccgctgc tgacacgatt gccgaaggcg caaccaccat cgccagaggg
     2461 atccatgctg tagctggaat cggcccgaca actttcagca ccggcatccc ccaatagcgc
     2521 acggaactcg accagccgat gcacaccccg ctaacaagtc cgattatcac gccaagtgtg
     2581 tagccactca ggagcaacac gagcgagtgc caggtgctat cgagcaagag cccgcgatcg
     2641 ctaatcaagc tgcgtaagac tgccgcgggt gcgggaaaat acggcagtgg aagcaaacgc
     2701 aagcctgccg tgatcacgtc ccaaacaccg agtaacagga tggcagctgt aaaaatcggc
     2761 cacatgtgcc gcatccattt gcgcaacgca ggccagaatc tctgtgcgat tgcaagagcg
     2821 attgagacgc caagaatttc ccaaaacagc agcatgtaag aatgcgtctc gagtggcggc
     2881 gctttttttg cgatcagcag gtgagttccg aacgtaatta aactcgcgac cggaacagct
     2941 agctgcatcg gccagggcaa ttgcgatggt ttgtcgggaa ccgtggtgtc cgcattcatt
     3001 actcgtctga tcgatgtcat tctgagcgaa gcgaagaatc tcggatcatt tccgtccacg
     3061 tccgcgcaga aatagacaga gatgtttcgc tccgctcaac atgacagtga ctgcgtcttg
     3121 ggaggctcaa tcctggccgg caatcacatt tttgccgaga caaggcgcgt cggggtcggc
     3181 gagattcggc gcgtcctgat cgggttgatc gaacattttt cttcggcagc acgaatctcc
     3241 gctgtccttt tggatcaagg ccgcgatcag ccggatatct tcgtcgggtg aaacctgggc
     3301 accggcaatt ttttccacct cgatggtctt gatccactcg tccgtcacgc caggaagatg
     3361 catgaaagcg cgtttcgcca gtgcttcggt gtcggtctcc ggcgaaagca tcttggccac
     3421 tttcatttcc cgcccggcag attgcacgga ctcctcggct agctgaacac ttggtatata
     3481 gcgcaagcgc gcgagggcga cagtgttcag ttcgggcgtg gaagcgagat actttttctc
     3541 cacggccata atggcggcag cccgcggatt agtctcgacc cacttggcgc cttttaacag
     3601 cgcacgcgtt gctctagccg ccgtgtcggg gttggcatcc acccatttgc cgttcgcgat
     3661 gacctcgcag caatactcgt ccttgtaagg cgcgtcctct atctgatcgg caacgtttct
     3721 cactttaccc tccgcaatta acaggcttcc gatcggttcc gcgttagcga ctgcgtccac
     3781 ttcgccttta tcgatcgcca gacctaattc acccgctgga aaaactttcc acgtaacatc
     3841 tttgcccgcg tcgattccgt gaacgccgaa aacgcgattt gcgaaaacga acggaggcgt
     3901 ccccattccg ggtacaccaa ttcgctttcc tttcaggtcc tcaaccgtgt gaatattcgt
     3961 ttttacgccc gcttgaacac gcaaacatcc gcggtggatt ccggccaaaa atctgacatc
     4021 caaaccctgc tcgatcggct tcagaaagta catcaccaga tgatgagtga tgtcgtaact
     4081 gccaagcgcc agtgcatcct tataagttga ccagttgcac ttcaccagtt cgggctcgag
     4141 tccctcctcc ttgaagaatc ccttctcgta agctgcgtag atcggagctt cgcaggttaa
     4201 accgatgtaa ccgacacgga ctttattcga attctgaacg gtcgagccgg acttcttgtt
     4261 acagcccgcc actgccacga ggctcagcga aatggcaacg aggaaaagct tcgaggtcat
     4321 tgtagtatgt aaaggttttg gaaatagcgc gataagtttt gcctatgcaa gcagaatcct
     4381 cgcccgcaat caagctcttg attgcatttt acaaatgcgc cgaacaatat tgcttctcgc
     4441 atgtcggagc cattggacat tcgccatctc cggtattttc tcgcggttgc tgaggcgggg
     4501 agttttagcc gcgcagctga ccggctcgga atttcgcaac cgagtgtttc gcagcaaatg
     4561 cgggatttgg aaacgggtct tcgcgtgcct ctattccagc gccgtgggaa acggattttg
     4621 ctcactccac aaggtttgat ttttcaggag cacgcccggg cgctccttca tcagttggag
     4681 aatcttctcc acgaactgaa cggtgaaccc ggggaattac gcggcgcatt gcgcctgggt
     4741 gtgattcccg tgctgaatgt gccgctaatc ccgcaacttc tcggcgcatt tgtcgccgat
     4801 catccggcaa tcagcgtcac ggtcgaagaa atctcgtcca ctgagatcga gacggcactt
     4861 gaagaaggcc gcatggacgt tggattgggt tttctgaccc gccactctcc aaatctcagt
     4921 tacgagcgtc tttgcaccga tcaatttgcg ctcatcgtcg cgcagaacca cccgtgggcg
     4981 aagcggcgcg tggtcgattt cccaaaatta caccagcaac gtctgcttca attgccg
//
LOCUS       DATDAJ010000068        10271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_419520, whole genome shotgun sequence.
ACCESSION   DATDAJ010000068 DATDAJ010000000
VERSION     DATDAJ010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10271
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419520"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VIS53_01615"
     CDS             <1..298
                     /locus_tag="VIS53_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766510.1"
                     /translation="LRLLGDYATKYDVDGGHIHRYEKLLWKREAALESWSLKIQRHLA
                     EVRSVWAFAGNHFEGFAPRTSQRLAERLGFDLPLPPETEQGFSADRESQLDLQL"
     gene            complement(287..1051)
                     /locus_tag="VIS53_01620"
     CDS             complement(287..1051)
                     /locus_tag="VIS53_01620"
                     /inference="COORDINATES: protein motif:HMM:TIGR01856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004401 - histidinol-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase HisJ family protein"
                     /protein_id="HEY5766511.1"
                     /translation="MHPQGHRVQRYTQELLQPWADSARRLGLTDIAFTDHDRYHEGID
                     FDEIDQLRERNPDLQIRAGIELDNDPVHSTAGRKWIEKNWDKLDFVLGSVHFLERADQ
                     MFDSVPDGAAQFERRNIDEMYADYFRRLRGLIATGLIDSLAHLDLIKIHGHRPTADIG
                     TLVSETLEFIHARNLAIELSTAGWRKPVNELYPSDSIIELAMEKGIPFTTASDAHSHV
                     QLGENFANLAHKMAKIGIRRVCIFDKHKRTELPLQL"
     gene            complement(1151..1684)
                     /locus_tag="VIS53_01625"
     CDS             complement(1151..1684)
                     /locus_tag="VIS53_01625"
                     /inference="COORDINATES: protein motif:HMM:NF024102.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BsuPI-related putative proteinase inhibitor"
                     /protein_id="HEY5766512.1"
                     /translation="MKRRLVLLVLMVFVAGAMVGQDVTPTPTPARKRGWLSRILHPFS
                     PNIVPQYKDPRLRGLSLDLQITPQTVKLSEVRQLSVKVTLANLSKRPVTLDFPTTQRI
                     EIYLTNSAGDVLTKWSENHAIGEKAGTILINPSERIEYNETISTRELTPNKVFVAEVF
                     FPQFLELRIRQKFLAVP"
     gene            1775..2242
                     /locus_tag="VIS53_01630"
     CDS             1775..2242
                     /locus_tag="VIS53_01630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766513.1"
                     /translation="MRTLCVFVFCVAFALVNAAAKQRHCTFRVHAQANRQDTEVFSIS
                     ARATSSGKDVAIEKTPWITEHDVMAFSPYPAPNGTFGALFQLDHHGGVVLDTLSVERR
                     GRFLFIFINGRMITELQIDKRVSDGKIYVPSGLTAADVELMKKQWRLPGERKR"
     gene            2307..3296
                     /locus_tag="VIS53_01635"
     CDS             2307..3296
                     /locus_tag="VIS53_01635"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY5766514.1"
                     /translation="MTIQTAQTQVLDLVLPTDNDALFSGDGPAFYQYVDRDYNGVKGT
                     PWEGGQYGFVRDPKSTGGGVIYTRFHEGIDIRSVHRDANGEPQDEVRTIADGEVVHVS
                     PVAGYSNYGKYIVIEHRWGGSNYYSLYAHLSSIAVQPGETVKRGQPIAVMGYTGTGIN
                     RERAHLHLELCLMFSRQFDAWYSTFFRKDPNRHGLYNGMNLTGLDVARLYLALRKNPA
                     LTIPEFLAAEETFYKVTLPDARHFDLPTLYSWMSAGGKRSGSTWEVSFARSGLPLRIE
                     PTDRRVAQPEVSYVKNNTAECSYLTRDIVSGRGANAHLTNYGAQLMRLLIWPN"
     gene            complement(3312..3815)
                     /locus_tag="VIS53_01640"
     CDS             complement(3312..3815)
                     /locus_tag="VIS53_01640"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HEY5766515.1"
                     /translation="MKNNQHSNQIAVGIITISDRASAGDYDDLGGPALKQVAQKIGWQ
                     VLAEAIVPDEMARIQETIRSFARQGCGLVLTTGGTGIGPRDITPEAIRAMMRVELPGF
                     GEVMRAESMKITPNAILSRNLAAVVDQALVIALPGKPSGAVECLSFVQGAIPHGVAVA
                     QGTPTSC"
     gene            complement(3831..4301)
                     /gene="moaC"
                     /locus_tag="VIS53_01645"
     CDS             complement(3831..4301)
                     /gene="moaC"
                     /locus_tag="VIS53_01645"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEY5766516.1"
                     /translation="MKRLSHISRDGRAQMVDVSAKPLSKRRAVARGKIRLQRETLDLI
                     ARDQITKGNVFATARIAGIQAAKQTAQLIPLCHTLPLGQVNIDIVASKDDAEVKCTAQ
                     TIAQTGVEMEALVGVTVALLTIYDMCKAVDKRMVITDVHLVRKTKARVRGGVME"
     gene            complement(4413..5414)
                     /gene="moaA"
                     /locus_tag="VIS53_01650"
     CDS             complement(4413..5414)
                     /gene="moaA"
                     /locus_tag="VIS53_01650"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: protein motif:HMM:TIGR02666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEY5766517.1"
                     /translation="MQDRYGHRISYLRVSITDRCNERCNYCMPQELQEWLPRHEILTY
                     EETLRLIRIAAELGVSRVRITGGEPLTRRGILDFVRQIPDIPRITSIGLSTNGTLLAR
                     EITPARRMAEALRDAGVQSVNISLDTLDAEVYSQITGRDFHAQALNGIDAAIAAGFDQ
                     IKLNAVLMRGRNEDQLLPLIEFAAARNLLLRFIELMPVSTTEVLSESNFMSVTEAKRL
                     VESAYGSLIPETEFRTNGPATYYQIPGRAQRIGFIGAMTNMHFCENCNKLRLTCDGKL
                     RPCLGSYLEFDIMEPLRAGASDEQLKQFFLNVVERKPQEHDFRNSYQPNRKMIAIGG"
     gene            5500..5925
                     /locus_tag="VIS53_01655"
     CDS             5500..5925
                     /locus_tag="VIS53_01655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766518.1"
                     /translation="MQGRLARVALTFAITGGALIFSGCGTTGTRISQHPEMYQSLTPR
                     DQALVSQGQIRTGMTMDAVWLAWGTPEQKIPGNMRGRLTETWVYLRYNTPPSYGGPYY
                     YGPFDWSYIPPKFPYPSKGVTFSNSRVVFFRHLPSPPPL"
     gene            5975..6415
                     /locus_tag="VIS53_01660"
     CDS             5975..6415
                     /locus_tag="VIS53_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766519.1"
                     /translation="MKRCSLLRALRLTVAAGTLVLTSCSTAPTRISEHPDLYQSISHR
                     DQALVNQGQIRIGMSRPAVWLAWGSPHRRIIGNMGGGTTETWVYTYYARYPYYPYEPL
                     DEYFGAPLYDPFCYSWFPPSIPYPGKLVTFAHGKAVSYQYVTSR"
     gene            6480..7949
                     /locus_tag="VIS53_01665"
     CDS             6480..7949
                     /locus_tag="VIS53_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HEY5766520.1"
                     /translation="MAYRSFRQFLDALEQAGELKRVAIPVDTNLLIAEWADREMKSPG
                     GGKALLFEQPIVDGKKSEFPVAINTMGSRRRMAMALQVSDVEDVAREIQLILKAKPPT
                     DLREGWNLLKQGIHLLHARPKSVRDAPCQEVVREIERGDGFSLHDLPILKCWPKDGGR
                     FVTLPNVHTRDPETGARNVGIYRMQVYDERTTGMHWQLHKVGARHGKRYYERGERMPV
                     AVTLGGDPVYTFAATAPLPDGLDELLFAGFLRRKSIELVRCKTIDLEVPADVDFVLEG
                     YVQPGDMQPEGPFGDHTGFYTAVENYPVFHLTAITHRRDAIYPTTIVGKPPMEDFYIG
                     DASVRILLPVFKMNFPEIVDITLPPEGVFHNLVFVSIRKQYPYQAFKVMHGLWGMGQM
                     MFSKYIIAVDEDCDVHNTSEVLFRLCANTDPARDTTVIKNPSDSLDHAPSEQNIGSHM
                     GFDATRKLPGENYHRPWPELLNMTDEARALVDKLQTQAR"
     gene            complement(7981..8370)
                     /locus_tag="VIS53_01670"
     CDS             complement(7981..8370)
                     /locus_tag="VIS53_01670"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HEY5766521.1"
                     /translation="MQIKILTIVSIVAAGCSILSSCDTPVGQGAGWGAATGAFIGAAA
                     TGNVRAASIGAAAGAAAGALTGKIVQENQAAGYGPPPLGGYPYARWAGRSGFFYSPYT
                     GRVYDLRGMPPGGLTRDVDTGRLFRKP"
     gene            complement(8461..8772)
                     /locus_tag="VIS53_01675"
     CDS             complement(8461..8772)
                     /locus_tag="VIS53_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766522.1"
                     /translation="MKSLKIVSALVLGVFVLGTTLYAQGMDTRTTKPVMTGEAITKED
                     AQKKYPPPASGYPRGTRDPHDPSGVVASPYSPNQKYDCSKINHGELVLDVRTKKVFVY
                     P"
     gene            complement(8815..9663)
                     /locus_tag="VIS53_01680"
     CDS             complement(8815..9663)
                     /locus_tag="VIS53_01680"
                     /inference="COORDINATES: protein motif:HMM:NF012705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene/phytoene synthase family protein"
                     /protein_id="HEY5766523.1"
                     /translation="MNAAAITRQSKSNLALAFVSLGRERKRDITIFYAFCRVVDDIAD
                     SAELSILDKRVRLANWRQMLRAGAPDEPLLARDVRQLMHKYSLPPDMLEEIIAGVEMD
                     LSIARYPTFEELRVYCYRVASAVGLVSIEIFGYRNPRCREYAVDLGLALQMTNIIRDV
                     WKDFQAGRIYLPQEDLARFHYSEAELAKRKYNDHFIQLMQFQASRAREFFGRAVAELP
                     PEDRRAMAPAEIMRSIYRALLRRIELDNFRVFEKEYRLSKLEKAGRIATQLLKSFLNL
                     RSRTSV"
     gene            complement(9689..>10271)
                     /locus_tag="VIS53_01685"
     CDS             complement(9689..>10271)
                     /locus_tag="VIS53_01685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766524.1"
                     /translation="LVGVYIQVYLITVCLAWIRGLSFEEGELFRFAMRRFSYVLEWAG
                     IVVAVSTLILRVPLVLAYFIKIPRVLDYLPIARVLMSGLIIAFCSVQISLVLHNETLI
                     AAMRAHIYFIQKNAGRLAWFLVICGIHFYGIMACDAIVRGGIADRLGALLLWKFSFAC
                     LRGVVTGWLLASWVCLFRQCETRRIQQEKWIQY"
BASE COUNT         2363 a         2842 c         2740 g         2326 t
ORIGIN      
        1 cctgcgcttg cttggcgatt acgcaaccaa atacgacgtc gatggtggcc acatccatcg
       61 ttacgaaaaa ttactctgga aacgcgaagc cgcgttggaa agctggtcgc tgaaaattca
      121 gcggcatctt gcagaagtgc gcagtgtctg ggcatttgcc ggcaatcact ttgaagggtt
      181 tgcaccgagg acgtctcaac gtctcgccga acggctcggc ttcgatctgc cgctgccgcc
      241 ggaaacggaa cagggttttt ctgcggacag agaatcgcag ctggatctac agttgtagcg
      301 gcagttcggt acgtttgtgt ttgtcaaaaa tgcaaacccg gcgaatcccg attttggcca
      361 tcttgtgcgc gaggttcgca aaattttcac cgagttggac gtgtgagtgc gcgtcggatg
      421 cggttgtaaa tggaatcccc ttctccatcg ccagctcgat aattgaatcg ctgggataaa
      481 gttcgttcac tggtttgcgc caaccggcgg tggaaagctc aatcgcaagg ttgcgtgcat
      541 gaataaattc aagtgtctca ctaaccaatg tgccgatgtc tgctgtcggg cgatgtccat
      601 ggattttgat cagatccaag tgggcaagag agtcgatcaa cccggtcgca attagtcccc
      661 ggagacggcg aaagtaatcg gcgtacatct cgtcgatgtt cctgcgctcg aattgcgccg
      721 cgccatccgg cacgctatcg aacatctgat cggcgcgctc caggaaatgc accgagccga
      781 gaacgaaatc cagcttgtcc caattttttt cgatccattt gcggccagcc gttgaatgaa
      841 caggatcgtt atccaactcg atccccgcgc ggatctgcaa atcgggattt cgttcgcgca
      901 actggtcgat ttcatcaaaa tcgattcctt cgtggtaacg atcatgatcg gtgaaagcga
      961 tatccgttaa ccctaatctc cgcgccgaat ccgcccaggg ctggagcaat tcctgcgtgt
     1021 atcgctgcac acgatgtccc tgcgggtgca tgtggtagtc ggagaaaagt tgatagtgtg
     1081 tagttgacgg ttgatcgacg tccacaaacc gctctatcag ctatcaactg ttaactatca
     1141 actctccggc tcaaggcacc gccaggaact tttgccgaat gcgcagctcc agaaattgag
     1201 gaaagaaaac ctcggcgaca aaaactttgt tgggcgtaag ctcgcgagtc gagattgttt
     1261 cgttatactc gattcgctcg gacgggttga ttagaattgt cccagctttt tcaccgatcg
     1321 cgtggttctc agaccacttt gtcaggacat cgcccgcaga attcgtgaga tagatttcaa
     1381 tgcgctgagt tgtgggaaaa tcgagtgtga cggggcgttt ggacagattt gccagtgtta
     1441 ctttcacgct aagctggcgg acttcagata acttcacggt ttggggagtg atttgcagat
     1501 cgagggagag cccacgcaac cgtggatctt tgtattgcgg aacgatgttg ggagaaaacg
     1561 gatgaagaat ccggctcaac caacctcgtt ttcgcgccgg cgtcggcgtg ggcgtaacgt
     1621 cctggccgac catggcccca gccacaaaaa ccatcagaac cagcaaaaca agacggcgct
     1681 tcatgaggcc ctaaacagcc cgaaaacttt tctgggttgc aaaattgctg tcaaaccatt
     1741 tatgaactcg cgaatgtctt cgcagtcaat cggcatgaga actctttgtg tattcgtgtt
     1801 ttgtgtggct tttgcgctgg ttaatgcagc agcgaagcaa cgacactgca cgtttcgcgt
     1861 acatgcgcaa gcaaaccggc aagacacgga ggtgttctca atatccgcgc gtgcgacatc
     1921 ttccgggaaa gatgttgcca ttgaaaaaac gccgtggatt acggagcacg atgttatggc
     1981 cttttctcca tacccagccc cgaacggaac ttttggcgca ttatttcagc tcgaccatca
     2041 cgggggcgtc gtgctcgata ccttgagcgt cgagcgccga ggccgttttc tctttatatt
     2101 catcaacggc agaatgatca ccgaactaca gatcgacaag cgagtgtcgg atggaaaaat
     2161 ttatgttccg tccggactaa ctgccgcgga tgttgagcta atgaagaaac agtggcgctt
     2221 gccaggggaa cgaaaacgct aagcagttca tgctcatgcg actattgttc gccggaattg
     2281 tttttgctct ccttttttct gttcagatga caattcaaac ggcacaaact caggttctcg
     2341 atcttgttct acccactgat aatgatgctc tcttttcagg agacggcccc gctttttacc
     2401 aatatgtcga ccgagactat aacggtgtga aagggacccc atgggaaggc ggccaatatg
     2461 gctttgtccg tgatccgaaa agcactggag gaggcgtcat ttacacccgt tttcatgaag
     2521 gaatcgatat ccgatccgtg caccgcgatg caaatggcga gccgcaggac gaagtacgca
     2581 ccattgccga tggcgaggtt gtgcacgtca gtcccgtggc tggctactca aattatggca
     2641 aatacatcgt aatcgagcat cgatgggggg gctcgaacta ctacagtctg tacgcacatc
     2701 tcagctcgat cgcagtgcag cccggtgaga cggtgaagcg cggtcaacct atcgcggtga
     2761 tgggttacac gggaacgggc ataaaccgcg aacgcgcaca tctgcatctg gaattgtgtc
     2821 tgatgttcag ccgccaattc gacgcctggt acagcacatt ttttagaaaa gatcccaatc
     2881 gccatggcct ctacaacggg atgaacctca ccggcctcga cgtggcgcgc ctctatctgg
     2941 cgctccgaaa gaatccggca ctcacgattc ccgaatttct cgccgctgaa gagacattct
     3001 ataaggtcac gttgccagac gcgcggcact tcgatttgcc aacactgtac tcctggatgt
     3061 ctgcaggagg aaaacgaagc ggatcgacat gggaggtctc gttcgcgcgt tccggtctcc
     3121 ccttgagaat tgaaccaact gacagacgtg tagcgcagcc cgaggtaagc tacgtaaaga
     3181 ataacacagc ggaatgttcc tatctcacgc gcgatatagt ttctggtcgt ggagcaaatg
     3241 cgcatctgac gaactatggc gcgcaactga tgcgcctgct gatctggccg aattaaaccg
     3301 ggccgaaact ttcagcacga cgtcggcgtg ccttgtgcaa cggcgacacc gtgcgggatt
     3361 gcgccttgta caaagctgag acattccaca gcgccgctcg gcttccctgg cagcgcgatc
     3421 acaagagcct gatcgacaac cgcggcgagg ttgcgtgaga gaatggcatt gggcgtaatc
     3481 ttcatcgatt cggcgcgcat cacttctcca aatcctggca attctactcg catcatggca
     3541 cgaatcgctt ccggcgtaat atcccgcggt ccgatacccg tgccgcccgt cgtcagaacc
     3601 aagccgcagc cttgcctggc aaacgatcga attgtttcct gaatccgggc catctcgtct
     3661 ggcacaatcg cttccgccag gacctgccag ccaatctttt gcgcgacttg tttcagggcc
     3721 ggccccccca agtcgtcata atcgcccgca ctggcgcgat cagaaatcgt gatgatacca
     3781 accgctattt ggttggagtg ttggttattt ttcattactc cactactcca tcactccatt
     3841 actccgccgc gcacacgcgc tttggtcttc cgaaccaagt gcacatcagt gatgaccatg
     3901 cgcttatcga ccgccttgca catgtcgtaa atcgtcagca atgcgacggt gacgccgacc
     3961 agggcttcca tctcgactcc cgtttgcgca attgtctgcg cggtgcattt cacctccgca
     4021 tcatccttgg aagcaacgat atcgatgttt acctggccta gcggcagagt atggcaaaga
     4081 ggaatgagtt gcgcagtttg cttggcggcc tgaatcccag caatgcgcgc ggtcgcgaag
     4141 acattgcctt tggtgatttg atctcttgcg atcagatcga gtgtttcccg ctggagccga
     4201 atctttccgc gtgcaacggc tcttcgttta ctgagcggct tcgctgaaac atcaaccatt
     4261 tgcgcgcgac cgtcgcggga gatgtgactc aatcgtttca tttccttggc ctgtcattcc
     4321 gagcggagcg aagcggagtc gaggaatccc gcggcgccat cgaggctaac gcaacgggat
     4381 gtctcggctt cgctcgacat gacccggact gttcagccgc cgatcgcaat cattttgcga
     4441 ttaggctggt aactgtttcg aaaatcgtgt tcctgcggct ttcgttcgac cacgttgaga
     4501 aaaaactgct tgagctgttc atcgctcgcg cccgcccgca gcggttccat gatgtcaaac
     4561 tccaaatagc tgccaagaca tgggcgcaac ttcccgtcgc acgtgaggcg gagcttgttg
     4621 cagttctcgc agaaatgcat gttcgtcatc gcaccgatga aacctatgcg ctgcgcgcgt
     4681 cccggaatct ggtagtaagt ggctggccca ttcgtgcgaa actccgtctc cggaatcaga
     4741 ctcccgtaag ccgattcgac caaccgtttc gcttccgtta ccgacataaa attactctcg
     4801 cttaggactt ccgtggtgct aaccggcatc aattcaataa accgaagcag aaggtttcgc
     4861 gctgcagcga attcgattag cggtagcagt tgatcttcat tgcgcccccg catgaggact
     4921 gcgttgagtt tgatttggtc gaagcctgcg gcgatcgccg catcaattcc attaagcgcc
     4981 tgtgcatgga aatctcgacc ggtgatctgc gaataaactt cggcatcgag ggtatcgagt
     5041 gaaatattca ccgattgcac accggcatcg cgcagcgctt cggccattct cctggcgggc
     5101 gtgatttccc gtgcaagcaa ggtaccgttc gtcgatagac cgatgctcgt gatccgggga
     5161 atatcaggaa tttgcctaac gaaatccagt atgccccggc gtgtcagcgg ttcaccacca
     5221 gtaattcgca ctctcgagac gccgagctcc gccgcgatgc gaatgagccg cagggtctct
     5281 tcgtaggtca agatttcgtg gcgcggcaac cactcctgca attcctgcgg catgcaatag
     5341 ttgcatcgct cgttacagcg gtccgtaatc gagacgcgca gataggaaat ccggtggccg
     5401 taacgatcct gcattgcagc gacatgttac tgggaacgcg acagcgaatc aaccaacggc
     5461 cttcattgac gcaatacagc ggacgtatca tcgtaccgga tgcaaggtcg attggcgcgc
     5521 gtcgcgctga cattcgcgat aactggtggg gcgctgattt tcagcggttg cggaactaca
     5581 ggaacccgca tttcacaaca tccggaaatg tatcagagcc tcacgccgag agaccaggca
     5641 ttggtcagcc aggggcagat tcgcacaggg atgaccatgg atgcggtgtg gctggcctgg
     5701 ggcacacccg aacaaaagat tccgggcaat atgcgtggtc gtctcaccga aacttgggtc
     5761 tatttacgtt acaatacgcc tcccagctac ggcgggcctt attattacgg cccgtttgat
     5821 tggtcataca tccccccaaa gttcccatat ccgtctaaag gggtcacctt ctcaaacagc
     5881 agagttgtgt tcttccgaca cctgccgtcg ccaccgccgc tgtaacgccg agttaggctt
     5941 gccaactcag cggccggtat gatttgctcg cggcatgaag cgttgctctt tgcttcgcgc
     6001 attgaggttg actgtcgcgg cgggcacgct tgttctcacc agttgttcaa cggcaccaac
     6061 gcgaatttcc gagcatccag atctttacca gagcatttca cacagagatc aggcgctggt
     6121 aaaccagggg caaattcgaa tcggtatgtc acgacccgcg gtgtggctgg cgtggggctc
     6181 gccccaccga agaattatcg gcaacatggg cggtggtacg acggagactt gggtttacac
     6241 ttattacgcc cgctacccgt actacccgta tgaaccgttg gacgaatatt tcggggcgcc
     6301 tttgtacgat ccgttttgtt attcgtggtt cccgccaagc atcccttatc caggcaaact
     6361 cgtcactttc gcccacggca aagcggtgtc ctaccaatac gtcacatcgc gttagatccg
     6421 atcaaaaatt ctgtcgcgtt gcggcgtgcg acgaacgagt attccagcgg gtctgattca
     6481 tggcttaccg ctcatttcga cagttcctcg atgctcttga gcaagcgggc gaactgaagc
     6541 gcgtcgcaat ccctgtcgac accaacctgc tcattgccga atgggcagat cgcgaaatga
     6601 aatcgcccgg cggcggaaaa gctttgttgt tcgagcaacc gattgtggat ggaaaaaaat
     6661 cggagtttcc ggtcgccatt aacactatgg gatcgcgccg ccgcatggcc atggcgctac
     6721 aggtttccga tgttgaagat gtcgcgcgcg agattcagct catcctgaaa gcaaaaccgc
     6781 ccacggattt gcgcgaagga tggaatttac ttaaacaagg gatccatctg ctgcatgcgc
     6841 ggccgaaatc agtgcgtgac gcgccctgcc aggaagtggt gcgtgaaatc gagcgtggcg
     6901 acggtttttc attacacgat ctccccatcc tcaaatgctg gccgaaagac ggcgggcgtt
     6961 ttgtcaccct gccaaatgtc catacgcgcg atccggaaac cggtgcgcgc aatgtgggca
     7021 tttaccgaat gcaagtgtac gacgagcgca cgaccgggat gcattggcaa cttcacaaag
     7081 tcggcgcgcg ccacggcaaa cgctattacg aacgcggaga gcggatgccg gtggctgtca
     7141 cgttgggtgg cgatccggtt tacacgttcg cggcaaccgc cccgttgccg gatggtttgg
     7201 acgaattgtt atttgccggg ttcctgcgaa gaaaatcaat cgagctggtt cgctgcaaaa
     7261 ccatcgactt ggaggtgccg gcggatgtcg attttgtttt ggaaggctat gtgcagccag
     7321 gtgacatgca accggaaggg ccctttggcg atcacaccgg attttacacc gcagtcgaaa
     7381 actaccccgt tttccatctg accgcgatta cgcaccggcg cgatgcgatt tacccgacaa
     7441 cgatcgtcgg caaaccgccc atggaagatt tttacattgg cgacgcgtca gttcgaattc
     7501 tgctgccggt gttcaaaatg aatttcccgg agattgtgga cataacgttg ccgcccgaag
     7561 gggtatttca caatctggtt tttgtgagca tccggaagca atacccctat caggctttta
     7621 aagtgatgca tgggctctgg ggaatgggac aaatgatgtt cagcaagtac atcatcgcag
     7681 tggacgaaga ttgcgacgtg cataacacga gcgaggtgct ttttcgattg tgcgcgaaca
     7741 ccgatcccgc ccgggacaca accgtcatta aaaatccaag cgactcgctc gatcacgcgc
     7801 cgagcgaaca gaacatcggt tcccacatgg gatttgacgc gacgcgcaaa ctaccgggcg
     7861 aaaactatca ccgaccatgg ccggaattac taaacatgac agacgaagcg cgggcactgg
     7921 tcgacaagct gcaaacacaa gcgcgttgaa agcactcaac gccggagtcc ggcgttccta
     7981 ttatggtttg cggaacaggc gacccgtatc aacgtcccga gtgagtccac cgggtggcat
     8041 gccacgtaga tcgtaaacgc gacctgtata agggctgtag aaaaatcctg atcttcccgc
     8101 ccatcgcgca tacggataac caccgagcgg cggcgggcca tatcccgcag cttgattctc
     8161 ctggacaatc ttgccggtta aagcgccagc tgccgctccg gccgctgcgc cgattgacgc
     8221 cgcgcggaca ttgccagtcg ccgcggcacc gatgaaggcg ccagtagcgg cgccccaccc
     8281 agcgccctgc ccaactggcg tgtcgcacga actcagaatg gagcaacccg ccgcaacgat
     8341 cgatacaatc gtcagaatct ttatttgcat acgccgattt aattcgcggc attaaactgc
     8401 gtagccgcac tgaagttgcg gcagtcgtat ccagacagcc tttagctggc cgaatcgatg
     8461 tcaggggtat acaaatacct tctttgttcg tacgtcgagg accagctcgc cgtgattaat
     8521 cttcgaacag tcatactttt gattgggcga gtatgggctg gctacgactc ccgaagggtc
     8581 atgcgggtcc cgggtcccac gcggatatcc agaagcgggc ggcggatatt tcttttgagc
     8641 atcttctttc gtgatcgctt cccctgtcat gacaggcttg gttgtgcgag tgtccatgcc
     8701 ttgcgcataa agagttgtgc cgagcacaaa cacaccgagc accaatgccg aaacaatttt
     8761 cagagatttc attttcatat ttttgttgtt cgtaacattt acgcagccag caactcagac
     8821 ggatgtgcgc gaccgcaaat tcaaaaaaga tttgaggagt tgcgtcgcga tccggcctgc
     8881 tttctccagc ttgcttagtc ggtattcttt ttcgaaaaca cgaaagttgt ccagttcaat
     8941 tcgccgaagc agcgctcggt aaatggagcg catgatctct gctggcgcca tcgcgcggcg
     9001 atcctcaggc ggaagctcag ctaccgcgcg gccgaagaat tcacgcgcgc gcgacgcttg
     9061 gaattgcatc aactggatga agtgatcgtt gtattttcgt tttgccagtt cagcctccga
     9121 atagtgaaac cgcgccagat cttcctgtgg caggtaaatg cgcccggcct gaaaatcctt
     9181 ccagacgtcc cgaatgatgt tggtcatttg caacgctagt ccgagatcga ccgcatactc
     9241 ccggcaacgc gggttgcgat aaccaaagat ctcgatgctg accagcccaa ctgcgctggc
     9301 gacccggtaa caatagacac gaagctcttc aaacgtggga tatcgtgcaa tgctcaaatc
     9361 catttctact ccggcgatga tttcctcgag catgtcgggt ggaagcgaat atttgtgcat
     9421 caattgccgc acatcgcgcg cgagcagcgg ctcgtccgga gcgccggcgc gaagcatctg
     9481 gcgccaattg gccagacgca ctcgtttgtc gaggatgctt agttcggccg aatcggcaat
     9541 gtcatcgacc acacggcaga acgcgtagaa gatcgtaatg tcgcgtttgc gttcgcggcc
     9601 taacgaaaca aaagccaggg ccagattgga tttgctctgg cgtgtgatgg cggccgcatt
     9661 cacgttcgcc ttctcgtaac ctgcttggtc aatattgaat ccatttctcc tgctgaattc
     9721 tccgtgtttc gcattgccga aacaggcaga cccatgaagc caacagccag cccgtgacca
     9781 cgcctcgcag acacgcgaaa ctgaatttcc acagcaagag cgcgcccaat cgatcggcga
     9841 tcccaccgcg cacaatggcg tcgcacgcca tgatgccata aaagtgaatc ccgcaaatca
     9901 cgagaaacca tgcgagacga ccggcatttt tttggatgaa ataaatgtgc gcgcgcatcg
     9961 ctgcgatcag cgtttcgttg tgcagcacga gcgagatttg gaccgaacaa aacgcgataa
    10021 tcaacccgct catgagtacc ctcgcaatgg gcaggtaatc gagcactcgc ggaatcttga
    10081 tgaagtaggc aaggacgagc ggcacccgga ggatcaacgt gctcaccgca accacaatgc
    10141 ccgcccattc caatacataa ctgaaccgcc tcatggcgaa ccggaacaat tcgccctctt
    10201 caaagctcaa gccccttatc caggccagac acacggtgat gagatagacc tggatgtaaa
    10261 cgcccacgag a
//
LOCUS       DATDAJ010000069         2664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_436004, whole genome shotgun sequence.
ACCESSION   DATDAJ010000069 DATDAJ010000000
VERSION     DATDAJ010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436004"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1321
                     /gene="guaA"
                     /locus_tag="VIS53_01690"
     CDS             <1..1321
                     /gene="guaA"
                     /locus_tag="VIS53_01690"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEY5766525.1"
                     /translation="MLMAHHLDGRVVFTGRREYGAGVLHMANRSELFDGLGNQLDVWN
                     SHGDEVTALPKGFHVVGITDGCDFAAVEDPQRKLYGLQFHPEVAHTPRGKEILQNFVY
                     HICHCAMDWTMGSFIEEACARVRKQVGDDKVVLGLSGGVDSSVTAALLHKAIGDQLTC
                     IFVNNGLLRAREEEIVQRVFGENFHIKLKYVDASERFLAKLRGVTDPEEKRKIIGNEF
                     IRVFEDTIVDLAKTDDGSPVSDHKFRFLAQGTLYPDVIESVSIEGNPAQVIKSHHNVG
                     GLPEKMHFELVEPVRQLFKDEVRQAGLQLGLPKEIVNRQPFPGPGLAVRILGEVTPER
                     LSILREADTIVQSEMEVADWYYKVWQSFAVLLPVKSVGVMGDQRTYENTIALRIVESQ
                     DGMTADWVRIPYELLARISNRICNEVKGVNRVVFDISSKPPSTIEWE"
     gene            complement(1357..>2664)
                     /locus_tag="VIS53_01695"
     CDS             complement(1357..>2664)
                     /locus_tag="VIS53_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HEY5766526.1"
                     /translation="EIDKRRPLSFEEIKSDLVLSNGARFYNDHAHPEYSTPECTTLQQ
                     IAAQDKAGERILAECARRRNLKLPSGYEVRLYKNNTDFAGHSYGCHDNYLMTRDIPWD
                     RIVSGILPFLVTRQIFSGAGKMGIEGESSQGEPGIYQISQRADFFSVIVSIDTMNRRP
                     LINTRDEPHVDASRYRRFHVILGDSNMSEWATAMKIGTTALVLDLIERGEAPQLEIAQ
                     PVDTHKSISRDQTYDWIIELKDGRKISAIDVQRIYLRAASKLWRNPPDDEHAWILCEW
                     ENVLNDLERDPMSTRDRVDWSAKKFLLDALQQDEKLSWSDPWLQSIDLEYHNLDLDRG
                     LYYELVRKGLMRRVTSEEEIKAAIFNPPETTRAFFRGRAVARFNDEISSIQWDEIVFS
                     NGAYSHRVALPEAAMDARLDALNHAARNGKDFSEFMNAIAQIG"
BASE COUNT          581 a          726 c          757 g          600 t
ORIGIN      
        1 aatgctaatg gcgcatcacc ttgacggccg tgtcgttttc accgggcgcc gtgagtatgg
       61 cgccggcgtg ttgcatatgg cgaatcgatc ggaactcttc gatggattag gcaaccagct
      121 cgacgtttgg aacagccacg gcgacgaagt aacggcgttg ccgaaaggtt ttcatgttgt
      181 cggaataacc gacggttgcg atttcgccgc cgtcgaggat ccgcaacgta aactttatgg
      241 gctgcaattt catcccgaag tcgcgcacac accgcgaggc aaagagatcc tgcaaaattt
      301 cgtctatcac atttgccact gcgcgatgga ctggacgatg ggctcgttca tcgaagaagc
      361 ttgcgcgcgc gtccgtaagc aagttggcga cgacaaggtc gtgctcggtt tgagcggcgg
      421 cgtcgattcg tcagtgacgg ccgcgcttct tcacaaagct atcggcgatc agctcacgtg
      481 cattttcgtg aacaacggtc tgctccgcgc gcgcgaggaa gaaattgtgc agcgcgtttt
      541 cggcgaaaat ttccacatca aactgaaata cgtggacgcc tcagagcggt tcctggccaa
      601 gctgcgcggc gtcactgatc cggaggagaa acgcaagatc atcggcaacg agttcattcg
      661 cgtgttcgaa gacacaatcg tcgatctggc aaaaactgac gacggatcgc cggtttccga
      721 tcacaagttc cgttttctcg cacaaggaac gctgtatcca gatgtaatcg agagcgtatc
      781 catcgaggga aaccctgcgc aggtcattaa atcgcatcac aacgtaggcg ggttgccaga
      841 gaaaatgcat ttcgagctgg ttgaaccggt gcgccaatta ttcaaagacg aagtgcgcca
      901 ggcgggcctg caacttggct tgccgaaaga gatcgttaat cggcagccat tccccgggcc
      961 gggtcttgcc gttcgcattc tgggcgaggt cacgcccgag cgactgtcga tcctgcgaga
     1021 ggcggatacg atcgtgcaaa gcgaaatgga agtcgccgac tggtattaca aagtgtggca
     1081 atcatttgcc gttttgctcc cggtgaaatc cgtcggtgtc atgggcgatc agcgcaccta
     1141 tgaaaacacg atcgccttgc ggatcgtcga aagccaggac ggcatgaccg cagactgggt
     1201 gcgtatccct tacgaattgc tcgcgcgcat ttccaaccgc atctgcaacg aagtcaaagg
     1261 cgtcaatcgc gtcgtgttcg atatctcgag taaacccccg agcacgatcg agtgggagtg
     1321 acgcgatttc cgattgccga ttgacaccag gttacatcaa ccgatctgcg cgatggcatt
     1381 catgaactcc gagaagtctt tcccgttgcg cgcggcgtga ttgagtgcgt cgagacgagc
     1441 atccatcgcg gcttcgggca gggcgacgcg atgtgagtag gcgccgtttg aaaagacgat
     1501 ttcgtcccat tgaatggacg aaatctcgtc gttgaaacgc gccactgcgc ggccgcggaa
     1561 aaatgcgcgc gtggtttccg gcggattaaa tattgcagcc ttgatttcct cctcactggt
     1621 gacgcggcgc atcagaccct tgcgaaccag ctcgtagtac aacccgcggt cgagatcgag
     1681 attgtgatac tcgaggtcga tcgattgcag ccacggatcg ctccaggaga gtttctcgtc
     1741 ctgctgcaac gcatcgagca gaaatttttt ggcggaccaa tcgacgcgat ctcgcgttga
     1801 catcgggtcg cgttcgagat cgttcagcac attttcccat tcgcacaaaa tccatgcgtg
     1861 ctcgtcgtct ggcggattgc gccacagctt gctggctgcg cgcaaataga ttcgttgcac
     1921 atcaatcgca gaaattttgc ggccgtcctt caattcaatg atccaatcgt aagtttgatc
     1981 gcgactaatc gatttgtggg tgtcaaccgg ttgcgcaatt tcgagctgtg gcgcctcccc
     2041 acgctcgatc aaatccagaa ccagcgcggt ggtcccaatc ttcatcgctg tggcccattc
     2101 gctcatgttg gaatcgccca ggatcacgtg aaaccggcgg tagcgactcg catccacatg
     2161 cggctcatcg cgcgtgttga tcagcggacg acgattcatc gtgtcgatgc tcacgatcac
     2221 gctgaaaaaa tcggcgcgtt gcgaaatctg atagattccc ggctccccct ggctgctctc
     2281 gccctcaatc cccattttcc cagcgccgga gaaaatttgg cgagtgacaa gaaacggcag
     2341 gatgccgctg acgatccgat cccacgggat atcccgggtc atcaggtaat tgtcatggca
     2401 accgtaactg tggccggcaa aatcggtgtt gttcttgtaa aggcggacct cgtagccgga
     2461 cggtaatttt agatttcggc ggcgcgcgca ttctgcgagg atgcgctcgc cggctttatc
     2521 ctgggccgcg atctgctgga gagttgtgca ctctggggtc gaatattccg ggtgcgcgtg
     2581 atcgttgtag aaccgcgcgc cgtttgaaag cacaaggtcg ctttttattt cctcgaagct
     2641 aagtggacga cgcttgtcga tctc
//
LOCUS       DATDAJ010000070         7038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_441014, whole genome shotgun sequence.
ACCESSION   DATDAJ010000070 DATDAJ010000000
VERSION     DATDAJ010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7038
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441014"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VIS53_01700"
     CDS             <1..651
                     /locus_tag="VIS53_01700"
                     /inference="COORDINATES: protein motif:HMM:NF037718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DR2241 family protein"
                     /protein_id="HEY5766527.1"
                     /translation="IQEVPTERFVLLHRDDETLHRLQMFQSAEDAIEIAKYDDAGDYR
                     ALKTAPNLRHGWRLELATVEELERALDYFYPSRLAIFAAWKSGYLKTTALRDTLDRQS
                     GMYRVAAKISDTQINDLVAGFCRSDGGCLRTILWKRDRNGAIASTKLPKEKFDPVCDQ
                     VTPCSRRPAGDARASHPPSWHSVVAGSEAATVPLLCQEACNLLVAECRKVVKGENG"
     gene            776..2050
                     /locus_tag="VIS53_01705"
     CDS             776..2050
                     /locus_tag="VIS53_01705"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5766528.1"
                     /translation="MIIRARIVVTMHGAPIENGAVAVSGYRIVDVGRFDDVKTRNAGN
                     AVDLGEQILLPGLINAHCHLDYTCLRGKIPPQKSFTAWIRAINAEKSELSPKDYVASI
                     TEGFVEAKRFGTTAIANLTAFPELIPQVQPPIRTCWFAELIDIRAPERANELIDSAIE
                     SFGRARLELVLSEAERGAPWGLAPHTLFTASSNLFRRCEEIAQREQILLTTHLAESRE
                     EMEMFRDGSGPLYEFMKSIGPPIDDCGNETPVKRFLDSIGSGGSPNRPPAIEVNRPYL
                     SWIVAHLNELTESDFDLLEQSNSKFHVVHCPRSHNYFAHSPFAFDRLRSFGFNICLGT
                     DSLASNESLSLFDEMRAFQKEFPKVSAEEIFRMVTVNSARALRYENALGQIRPGFGAD
                     LIAVPCTGSTDIFEQILAFDAPVSWSMVNGNT"
     gene            2147..3580
                     /gene="rpoN"
                     /locus_tag="VIS53_01710"
     CDS             2147..3580
                     /gene="rpoN"
                     /locus_tag="VIS53_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEY5766529.1"
                     /translation="MAAQGMQQRQSLALQQVLSPQLQQSLLILQTPLLELRNLVQQEM
                     ETNPVLEELPEDSGANEPSKTEASADENFRDEFEKLASLDEEWRDYMAQSASSSFDGR
                     RGSKEADEKRQFLFDSIPVQETLQQNLIAQLNQTVLSADDRKAAELVIGNIDDDGFLQ
                     STPEEMALNSGISQADFERVLGLIQTFYPAGVGARDLRECLLIQLQRQGKEHSVEYRI
                     VAEHMEDLGRHRFPEIARRMAISVEEVQKAADNIARLNPRPGQVFAAAPQNYVLPDVI
                     VEKVDGEYQIAFNNEQIPHLRISNLYKDIIASGDSQGSDVKDYIRDKIRSGKFLIRSI
                     HQRQQTIMNIAQQIVSRQRDFLEHGPSHLKPMTMAEIADAVGVHETTVSRAVSGKYMA
                     TAQGVFEMKYFFTGGYQTATGESLSNTSVKQSILDLVKHESGSAPLSDHEIVEILSER
                     GIPIARRTVAKYRSELNILPSHMRRKY"
     gene            3609..4421
                     /locus_tag="VIS53_01715"
     CDS             3609..4421
                     /locus_tag="VIS53_01715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEY5766530.1"
                     /translation="MASETSMQPAPDSPAAAVVTPPERADEIFLEGPRSRFAEFCTLL
                     RVMRDFLRGYRALHFVGPCVTVFGSARIKPDDPHYELARKMGAAIARLGFTVMTGGGP
                     GIMEAANRGAKEVGGRSVGCNIELPFEQTSNVYLDRCVRLHYFFVRKALLVKYSYAFV
                     VMPGGVGTLDELFEALALIQNEKIKDFPVVIMGTDYWRQLIGFIEQMAERGKISSADL
                     KLIYATDSVEEAIAHIRAKAIERFGLRRVAHMRRHFPWLGERGFPSKGPDIC"
     gene            complement(4447..5376)
                     /gene="yegS"
                     /locus_tag="VIS53_01720"
     CDS             complement(4447..5376)
                     /gene="yegS"
                     /locus_tag="VIS53_01720"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF009602.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001727 - lipid kinase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
                     /protein_id="HEY5766531.1"
                     /translation="MKTKSRNKRVRLILNGKIAANDALKAAVGRQRKAGHRIEVRVTW
                     EKGDARRFVSEAGMVDLVIAAGGDGTLNEIVHGLMDLSAVTRPILGIVPLGTANDFAT
                     GCGIPGDPAKALALSMKGEAVPIDVGKANDNWFINAASSGFGAEITATTSPELKRLFG
                     SAAYTVMGAILAINLHHYQGKLLLPGREITGSGPVAIVGNGRQTGGGLQIAPRACIDD
                     GLLDVLVVRQISPTALLAAARELQHLPSDGEYISYWQTPWLEVHPEEAMPVNLDGEPL
                     SFTAVRYEVVPKAIQLIVPPNCQLLSRGPKLKA"
     gene            complement(5686..5901)
                     /locus_tag="VIS53_01725"
     CDS             complement(5686..5901)
                     /locus_tag="VIS53_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766532.1"
                     /translation="MKPTPLLSDEPQTARLMLKEFTSAVATVRESEARAGRNCDRWGH
                     PCAGCLERKEQTKADVPISSAVKQRGK"
     gene            6044..6679
                     /locus_tag="VIS53_01730"
     CDS             6044..6679
                     /locus_tag="VIS53_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766533.1"
                     /translation="MHTRFVAGVIGAFAISNVVVSAEQQQPHFEVPAKDVAKAEELAN
                     QLAGLSRKVDPNEAKLLAECAYATVAQLRQEYRMFGTPIFNNFLVYHGWRKRGYCYQW
                     TEDLLLALDTLKLKTLELHWGDAYRDTWRENNCLVVTAKGQPFDRGMILECWRHFGHL
                     RWNLVPSDQDPYYENTKWSEKVRARAAAKASRANHGVAFQTRVAPDAKAAD"
     gene            6775..>7038
                     /locus_tag="VIS53_01735"
     CDS             6775..>7038
                     /locus_tag="VIS53_01735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766534.1"
                     /translation="MNSSGRSQSCVRVLVATVLFAVFSWTLLVRVSPQLHARIHADAH
                     RADHVCAITLFGSGGYEHGTQPMLVTVPLSAVQFSKIPALTPCW"
BASE COUNT         1584 a         1907 c         1996 g         1551 t
ORIGIN      
        1 attcaagaag taccgaccga gcggtttgtt ctcttgcatc gcgatgacga aacactgcat
       61 cggttgcaga tgtttcaaag tgcagaagac gcgattgaaa tcgcaaagta cgatgacgcg
      121 ggagactatc gcgcgctcaa aacggcgccg aacttacgac acggttggcg actggagctc
      181 gctactgtcg aagaactgga acgagcgctg gattattttt acccgagccg gctcgcgatt
      241 ttcgcggcgt ggaaaagcgg ctatctcaaa acgacggcct tgcgcgacac actggatcgt
      301 cagtcaggaa tgtaccgagt tgccgcaaaa atttccgata cacaaatcaa cgatcttgtg
      361 gcgggctttt gtcggtccga tggcggatgc ctcagaacta ttctatggaa gcgcgatcgg
      421 aacggagcaa tcgcgtcgac gaaattgccg aaggagaagt ttgatcctgt gtgtgatcaa
      481 gtgacgcctt gtagccgtcg ccctgcgggt gacgcgcgcg cttcgcaccc gccttcgtgg
      541 cactccgtcg tggcaggcag cgaagcggct acagttccgt tgctttgcca ggaagcgtgc
      601 aatcttctgg tcgccgagtg tcgcaaggtc gtgaaaggcg aaaacggtta atctgcagcc
      661 accgccctgt gggcggtatc gcatttcagt atcatcacaa tagaggacgg cgcacagtgc
      721 cgtggccaca ggatccgatt tgacgtcggt tagacaccgc agctacagct cacagatgat
      781 cattcgcgcg cgcattgttg tgacaatgca cggtgcgcct atcgagaacg gtgcggtcgc
      841 tgtttcgggg tatcggatcg tcgacgttgg cagatttgat gacgtcaaga cccgcaacgc
      901 cggcaacgct gtcgatctcg gcgaacagat attattgccc gggctgatca acgcgcattg
      961 ccatctcgat tacacctgtt tgcgcggaaa gattccgcca cagaagtctt ttaccgcttg
     1021 gatccgggcg attaacgcgg agaaatcgga gctctcgccg aaggattatg tcgcctcaat
     1081 aaccgaaggt ttcgtagagg cgaaaaggtt tggcacaacc gcgattgcga atttgaccgc
     1141 ttttccggaa ttaatcccgc aggttcagcc gccgattcgc acctgctggt ttgcggaact
     1201 gatcgatatt cgcgcgccgg agcgcgcgaa cgaacttatc gactctgcaa tcgaatcatt
     1261 cggtagggcg cgacttgagc ttgtcctgag cgaagccgaa agaggcgcgc cgtggggcct
     1321 cgcgccgcac acgttgttca cggcgtcgag caacttattt cgccggtgcg aggaaatcgc
     1381 acaacgggaa cagattctac tgacgacgca cctggccgaa tcgcgtgaag aaatggagat
     1441 gttccgcgat ggttcggggc cgctctacga gttcatgaag agcatcgggc cacccatcga
     1501 tgattgtggg aatgaaacgc cggtgaagcg tttcctggat tccataggta gcggcggttc
     1561 accgaaccgc ccgccggcga ttgaggtcaa tcgcccctac ctttcctgga tcgtggcgca
     1621 cctgaacgaa ttgaccgaga gcgatttcga tttgctcgaa caatccaatt caaaatttca
     1681 cgtcgtgcac tgtccgcgaa gtcacaatta tttcgctcac agcccattcg cattcgatcg
     1741 cctgcgctcg ttcggcttta acatctgcct cggcacggac agtctcgcga gtaacgagag
     1801 ccttagcttg tttgacgaaa tgcgggcttt tcaaaaggaa ttcccaaagg tttcagccga
     1861 ggaaattttt cgaatggtga ccgtaaattc cgcgcgcgcg ttgcgatacg aaaatgcgct
     1921 gggccaaata cggcctggct ttggagcaga cctcatcgcg gttccgtgca cgggctcaac
     1981 agatatcttc gagcaaatcc tcgccttcga tgcgcccgtt agctggtcaa tggtgaacgg
     2041 aaacacctaa tcgaacacgt ctgaccgttt aacatttcaa cgatttaacg gttacgcgga
     2101 gaagccgttg cttgcccacg gctgacgacg cccgtaaact cggcgtatgg ccgcacaggg
     2161 aatgcaacag aggcaaagcc tcgccttgca gcaagttctg tcaccgcagc tgcaacagag
     2221 cctgctcatt ctccagacgc cgctgcttga gctgcgcaac ctggttcaac aagagatgga
     2281 gacaaatccc gtgctggaag agttgccgga ggattcaggc gccaatgagc ccagcaagac
     2341 tgaagcctca gccgacgaga atttcaggga cgaattcgaa aaactggcga gcctggatga
     2401 ggaatggcgt gattacatgg cgcagtcggc cagctccagc ttcgatggcc ggcgtggttc
     2461 gaaggaagca gacgagaagc gccagttcct gttcgattcc attccagtcc aggaaacgct
     2521 tcagcaaaat ctcatcgcac aactgaacca gaccgtgctc agcgccgacg accgcaaggc
     2581 tgcggaactg gtcattggca atatcgacga cgatggattt ctccaaagca cgccagagga
     2641 aatggcgctg aactccggaa tctcacaggc cgatttcgaa agggtgcttg gattgatcca
     2701 aactttttat cctgcgggag ttggcgcgcg tgatttacgc gagtgtttgc tgatccaatt
     2761 gcagcgacag gggaaggaac acagcgtcga gtacaggatc gtagctgagc acatggagga
     2821 cttgggcagg catcgctttc cggagatcgc gcgccgaatg gcgatcagcg tcgaggaagt
     2881 gcaaaaggcc gccgacaaca tcgcgagact gaatcctcgc cccgggcagg tttttgctgc
     2941 cgcgccgcag aattacgtgt tgccggacgt gatcgtggaa aaggtggacg gcgaatatca
     3001 gatcgcattc aataacgaac agatcccgca tctgcggatc agcaacctct acaaggacat
     3061 cattgcgtct ggcgactcgc agggcagcga cgtgaaagac tacatccggg ataaaatccg
     3121 cagcggcaaa tttctgatcc gctcgatcca tcaacggcag caaacaatca tgaacatcgc
     3181 gcagcagatc gtttcccggc agcgcgattt cctggagcac ggcccatcgc atttgaagcc
     3241 gatgacgatg gcagaaatcg ccgacgccgt cggagtgcat gagaccacgg ttagccgcgc
     3301 ggtgtccggc aaatatatgg ccacggccca gggcgtattc gagatgaaat actttttcac
     3361 aggtggctat caaaccgcga ctggcgaatc gctgagcaac accagcgtaa agcagtccat
     3421 tctcgatctc gtgaagcatg agagtggcag tgcgccgttg agcgatcatg aaatcgtcga
     3481 gattttgagc gagcgcggca ttcctattgc gcgccgcacc gtcgccaagt accgcagcga
     3541 gttaaacatt ctgccaagtc acatgcggcg gaaatattga agtgctgtag agcggccgct
     3601 gagcgttaat ggcaagtgaa acttcgatgc agcccgcgcc ggattcgccg gcagcggcgg
     3661 ttgttactcc gccggagcgc gccgatgaaa tattcctcga aggcccgcgc tcgcggttcg
     3721 cagagttttg cacgttgctg cgagtcatgc gcgatttcct gcgtggatat cgcgctcttc
     3781 atttcgttgg tccttgcgta accgtttttg gttcggcgcg gatcaaacct gacgatccgc
     3841 attacgaatt ggccaggaaa atgggtgcgg cgattgcgcg gctcggattc acggtgatga
     3901 ccggcggcgg cccgggcatc atggaggcgg ccaaccgcgg cgcaaaagag gtcggtggcc
     3961 gctcggttgg atgcaacatt gagctgccat tcgagcaaac atccaacgtg tatctcgatc
     4021 gttgtgtccg gttgcattac ttttttgttc gcaaagcgct gctggtgaaa tattcctacg
     4081 ccttcgttgt tatgcccggc ggcgtcggaa ccctcgacga actttttgaa gcgctcgctc
     4141 tgattcagaa cgagaagatc aaagattttc cggttgtgat tatgggaacc gattactgga
     4201 ggcaattgat cggtttcatc gagcagatgg cggagcgtgg gaaaattagc tccgcggatt
     4261 taaagctgat ttacgcgacg gattctgttg aagaagccat cgcgcacatt cgcgccaagg
     4321 cgattgagcg atttgggctt agacgcgtag ctcacatgcg ccgccacttc ccatggctcg
     4381 gggagcgtgg ctttcccagc aaaggtccgg atatttgtta gcgtcccgac cgcgaactga
     4441 caggcgttag gccttcagtt tgggtccgcg cgagagcaat tggcaattcg gcggaacaat
     4501 cagctgaatc gcctttggca cgacttcata tcggaccgcc gtaaagctta atggctcacc
     4561 atcgagattg accggcattg cttcttcagg atgcacctcc agccagggcg tttgccaata
     4621 ggagatgtac tcgccatcgg atggaagatg ttgcaattct cgcgccgcgg cgagcagcgc
     4681 tgttggcgag atctgacgaa cgacaagcac atcgagcaaa ccgtcgtcga tgcatgcgcg
     4741 aggagcgatt tggagaccgc cgccagtctg ccgtccgttt ccaacgattg ccaccgggcc
     4801 gctgccggta atttcgcgac ccggcaagag cagctttcct tgataatgat gaaggttgat
     4861 cgccagaatt gcgcccatca cagtgtaggc ggcagaacca aacaggcgtt tgagttccgg
     4921 ggatgtggtt gcagtgatct cggcgccgaa gccagagctg gctgcattga taaaccagtt
     4981 gtcattggcc ttgccaacat cgattggcac tgcctcccct ttcatactga gcgccagagc
     5041 tttcgccgga tcacccggaa taccacatcc agtcgcaaaa tcattcgcgg tgccgagcgg
     5101 cactattccc aaaatgggtc gcgtaaccgc ggagagatcc attaagccgt gaacaatctc
     5161 gttcagtgtg ccgtctccgc cggcggcaat taccaaatcc accatgcctg cttccgacac
     5221 aaatcgcctc gcatctccct tttcccaagt cactcgcacc tcgatgcgat gcccggcttt
     5281 tcgttgccga ccaactgcgg ccttgagagc atcattcgcg gctattttgc cattaagaat
     5341 taagcgtacc cttttgtttc tggatttggt tttcatcgag aggcgcgcgg cgcttttgaa
     5401 aagtgttcgt ctttgcaaga cgaatcggca agcccgcgaa taaaaaatag gcgtctagtc
     5461 gcaattgctg ccaagcttca ttctcttgtg atcgcaaagc gaatcgcgga gattcacctg
     5521 tgaaagtcgc aatctttagt gccaaaaaat acgaccgtgc tgccttcgtg accgaccacg
     5581 ccggctgggc cgtttgggcg gttatgcggt tcgcaggcag cgaccgatga tccagacata
     5641 ggctatcatc atcaccgcaa cggtgaatac gattagatat tccatctatt tacctcgctg
     5701 tttgactgct gatgaaatcg gaacgtcggc tttcgtttgc tctttgcgct cgagacatcc
     5761 cgcacacgga tggccccagc gatcgcaatt gcggccagcg cgagcttcac tctcgcgcac
     5821 tgtcgcgacg gcagacgtaa attccttcaa catcagcctc gctgtttggg gttcgtcact
     5881 taacaagggc gtcggtttca ttgaattatt cctgctgcga ctgaatgtta ttgccgttgc
     5941 tacagcacga ctgagcgttt gttggctttt gctttgcaaa aattgcgtgg cagtttgcgc
     6001 cgcatacccg cgacggatgc tgttttctcg aaggattttg taaatgcata cgagatttgt
     6061 ggccggcgta attggagcat ttgcgatctc gaacgtggtc gtcagcgccg aacagcaaca
     6121 gccgcatttc gaagtaccag caaaggacgt tgccaaggcc gaggaattgg cgaaccagct
     6181 cgcgggactg tcacgcaaag ttgatccaaa cgaagcgaag ctcctggcag aatgcgccta
     6241 tgccaccgtg gcacagctaa ggcaggagta tcgaatgttt ggcacgccga tctttaacaa
     6301 tttcctcgtc tatcatgggt ggaggaaacg cggctattgc tatcaatgga ccgaggacct
     6361 gcttcttgcg ctggacacgc tgaaactcaa gacgcttgaa cttcactggg gtgacgcgta
     6421 ccgggataca tggcgcgaga acaattgcct ggtcgttacg gcgaaaggac agccgtttga
     6481 tcgcgggatg attcttgagt gctggcgtca tttcggacat ctccgttgga acctggtccc
     6541 gtcagatcag gacccatact acgagaacac caaatggtcc gaaaaggtcc gcgcacgcgc
     6601 agcggcgaaa gcgtcccggg ccaatcatgg tgttgcgttc caaacgagag tcgcaccgga
     6661 cgcgaaagcc gcagattagc attcgttccg agacagctgc ttcgggggag agagagcgcg
     6721 cgctccagga aattggttgc gcgaatcccg cctttatcac aggctgtgag gccgatgaac
     6781 agctcagggc gttcacaaag ttgcgtgcgt gttctcgttg cgacggttct gttcgcagtg
     6841 ttctcatgga cacttctcgt tcgcgtctcg ccgcaattgc atgcgcgtat tcacgcggat
     6901 gcacatcgcg ctgaccacgt ctgcgccatc accttgttcg ggtcgggcgg ttacgagcac
     6961 ggtactcagc cgatgctggt cactgtaccg ctgtcagccg ttcagttttc caaaattccg
     7021 gcgttaaccc cgtgctgg
//
LOCUS       DATDAJ010000071         2681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_447408, whole genome shotgun sequence.
ACCESSION   DATDAJ010000071 DATDAJ010000000
VERSION     DATDAJ010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447408"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1277)
                     /locus_tag="VIS53_01740"
     CDS             complement(<1..1277)
                     /locus_tag="VIS53_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5766535.1"
                     /translation="MVTWILKKILGSKNQRELKRLMPTVRRINEFDEQFKSLSDDELR
                     AKTANWKEEFSKIPDLQEQWKKLDEILPEAFAVVKNAARRLKEQGHSFTVCDQPMVWD
                     MVHFDVQLLGGIVLHRGRIAEMATGEGKTLVATLPLYLNALTGRGAHLVTVNDYLARR
                     DAEWMGQLYRFLGLTVGCIQHDEEPDSRREQYAMDITYGTNSEFGFDYLRDNGMATTR
                     EQQVQRGYHYAIVDEVDSILIDEARTPLIISGPATISTHQYDKWKPLIEQLVRKQNML
                     CNRVASEAIEKFEQGEVEMGGRLMFKVKLGQPRNKQLLRMMEDPDKRRAIDKAELSFF
                     QDTRKEELFALKEELFFTIDEKSNESDLSEQGRSFLNPDDPNSFVLPDLISEFTEIDL
                     DETVSPEEKDKRKAERQQHCDAQAERIHNISQLL"
     gene            complement(1468..2037)
                     /gene="aat"
                     /locus_tag="VIS53_01745"
     CDS             complement(1468..2037)
                     /gene="aat"
                     /locus_tag="VIS53_01745"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY5766536.1"
                     /translation="MIDPDLLLQGYQLGVFPMAMNDNSIEWFSPDPRAVLPLEDFHVP
                     HALRRVARRKPFEITIDKAFSAVIQACAERENTWINHDIIESYTRLHELGHAHSVEAW
                     KENKLAGGLYGVAVGGAFFGESMFHRVTDASKMALVALVEHLRARKFVLLDTQWLTPH
                     LQQFGGIQISRTHYLRLLRTAVDLPRRFL"
     gene            2232..2429
                     /locus_tag="VIS53_01750"
     CDS             2232..2429
                     /locus_tag="VIS53_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766537.1"
                     /translation="MRPLSIPLAIALLALSGCADPLEQRSGQEVQEQFGRGVTGQGTL
                     GPMDRAPDDPAAEHSVPQTHP"
     gene            2433..>2681
                     /locus_tag="VIS53_01755"
     CDS             2433..>2681
                     /locus_tag="VIS53_01755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766538.1"
                     /translation="MKTSERSVHSKILILDFGSQYTQVIARRIRECQVYSEIIRFDTP
                     AAEIAAMQPRGLILSGGPASVYDKGAPQIDPGIFSLGIP"
BASE COUNT          594 a          752 c          719 g          616 t
ORIGIN      
        1 agcaattgcg agatgttgtg gatgcgctcc gcctgcgcgt cgcagtgttg ctggcgctcg
       61 gcttttctct tgtccttctc ctcgggcgaa acggtctcgt cgagatcgat ctcggtgaat
      121 tcgctaatga gatccggcaa aacaaatgag ttcggatcat cgggattgag aaagctacgg
      181 ccctgttccg aaagatcgga ttcgttcgat ttctcgtcta tggtgaagaa caattcttcc
      241 ttgagcgcaa acagttcttc tttgcgggtg tcctggaaaa aggacagctc agctttatcg
      301 atggcgcgac gcttgtcagg gtcttccatc atgcgcaaaa gctgcttatt gcgcggctga
      361 ccgagtttca ccttgaacat aagacgaccg cccatctcga cctcgccctg ctcaaatttc
      421 tcgatcgctt cgctcgctac gcggttgcaa agcatgtttt gcttccgcac caactgctcg
      481 atcagcggct tccatttgtc gtattgatga gtggaaatcg tcgccggacc gctgatgatg
      541 agcggggtgc gcgcttcgtc gatgagaatg gaatcgactt catcgacgat cgcataatga
      601 taaccgcgct ggacctgttg ctcccgcgtc gtggccatgc cgttgtcgcg tagataatca
      661 aagccgaact cgctgttcgt gccgtacgtg atgtccatcg cgtactgttc gcgacgtgaa
      721 tccggttcct cgtcatgttg aatgcagcca accgttagac ccaggaaacg gtaaagttgg
      781 cccatccatt ccgcgtcgcg ccgagccagg taatcgttta ccgtcacgag atgcgcgccg
      841 cggccagtga gcgcgtttag ataaagtggc aacgtagcga ccaaagtttt accctcaccg
      901 gtcgccatct ccgcgattcg gcccctgtgc aaaacgatac cgccgagcaa ttgcacgtcg
      961 aagtgcacca tgtcccagac catcggctga tcgcataccg tgaagctgtg tccctgctcc
     1021 ttgagccgac gcgcggcatt tttcaccaca gcaaatgctt ccggcaaaat ttcatcgagc
     1081 tttttccact gttcctgcag gtccggaatc ttcgagaact cttccttcca attcgcagtt
     1141 tttgcccgca actcgtcgtc tgacaagctc ttgaactgct cgtcgaactc gttgatccgg
     1201 cgaacagtcg gcatcagacg tttgagctcg cgctgatttt tcgaccctaa aattttcttt
     1261 aaaatccaag taaccatttg aacccgtaat atcggtcaga ttcctgcact atcaatctgt
     1321 agccacggcc ctttgagtcg tctctgctgg tagggcgcgc cactccgtgc gcgccatccg
     1381 gtggtccgta agcggcgtgc agaggactgc ccgccctacc gaatggaccg gccgcaggcc
     1441 ggtggctaca ggaaaaagct acacgcgcta tagaaatctc cgcggcaaat cgactgctgt
     1501 ccgcaacagg cgcagataat gggtccgcga gatttggata ccgccaaact gttgcagatg
     1561 gggcgtgagc cattgcgtgt cgagcaggac aaacttgcgt gcgcgcaaat gttccaccag
     1621 cgccacgagc gccatcttgg acgcatcggt cacgcgatga aacattgatt cgccaaaaaa
     1681 cgcgccgccg actgcgacac cgtaaaggcc gccggcgagt ttgttttctt tccaagcctc
     1741 gactgaatgt gcatgaccga gctcatgtaa tcgcgtgtag ctttcgatga tgtcgtggtt
     1801 gatccaggta ttttcgcgtt cggcgcacgc ttggattact gccgaaaacg ccttgtcgat
     1861 ggtaatttca aaaggtttcc tgcgcgcgac tcggcgcaat gcatgtggca catgaaaatc
     1921 ctccaacggc aggacggcgc gcggatcggg cgaaaaccac tcgatcgagt tgtcgttcat
     1981 ggccatcgga aaaacaccga gctggtagcc ttggagtaaa agatcggggt cgatcatggg
     2041 cgttaaaacg ttaaagcgtt gaagcgttga agcggcaaga acgtagtcat tctgagcgaa
     2101 gcgaagaagc tctgattatt tttcgagcac ggttagcgtc accagtcaga gatgtttcgc
     2161 gtcgctcaat atgaacaggt tcaagtattc aaccttgttg caatgaaatc ggcgcttcct
     2221 aaaataagca gatgaggccc ctttcgattc cgctcgcaat cgcattgctg gccttgagcg
     2281 gctgcgccga cccactcgaa caacgcagcg ggcaggaagt gcaagagcaa ttcgggcgcg
     2341 gcgtcaccgg ccagggaacg cttgggccaa tggaccgagc acccgacgat ccagcggcgg
     2401 agcatagcgt gccgcaaacg catccgtaga atgtgaagac ctcagaacgc tcagtgcact
     2461 cgaaaattct catcctcgac ttcgggtcgc agtacactca ggtcatcgcg cggcgtatcc
     2521 gggaatgcca ggtgtattcg gagatcattc ggttcgacac accggctgct gaaatcgcgg
     2581 caatgcaacc cagaggacta atcctttcag gcgggccagc cagtgtttac gacaagggcg
     2641 cgccccaaat cgatccggga atcttttcct taggcattcc a
//
LOCUS       DATDAJ010000072         2880 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_448388, whole genome shotgun sequence.
ACCESSION   DATDAJ010000072 DATDAJ010000000
VERSION     DATDAJ010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448388"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..947
                     /locus_tag="VIS53_01760"
     CDS             <1..947
                     /locus_tag="VIS53_01760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766539.1"
                     /translation="MFSLAESPKRAGLLWAGTDDGRLWVTENDGGKWTELTDNLPEAA
                     RGQWVSRIEPSQLDANVAYVATNGYRMGDDRPSILRTADLGKTWQSVTGDLPSADPVE
                     VVREDPVNPKLLYAGTHFGVFASFDQGEHWVRIGDIPAVRVDDIQIHPRTSDLVIATH
                     GRSIAILDDSVPFREFTPEIAAKPAHLFSVRSVTARYLQPGFVDSNGKSVYRGENPAE
                     GALFTIWVHDFTGDEIKIAVTKTTGQPVANLKAPGTPGFTRLNWDLRPTKDVRVEYGG
                     EKPERFLAAGDYTAELNFGTTKMKQSFHVDLAEGITPR"
     gene            913..1569
                     /gene="coaE"
                     /locus_tag="VIS53_01765"
     CDS             913..1569
                     /gene="coaE"
                     /locus_tag="VIS53_01765"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:TIGR00152.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEY5766540.1"
                     /translation="MSISPKASRPGEVRVMPAIGITGGISTGKSTFVDGLRKLVPVAI
                     FFNADEAAHAFLNRPEVEKQIRREFGGQVFSSAGDLNRTKLRAIVFADATKKRALEQI
                     LHPRIRRQWRTEAKEHRNSPKFFFADIPLLYETGGESLCDRVVVVACSENVQLARLRK
                     RMSISSAEAKQMISSQMPLEEKIRRADHVVWNNGDRTSLMEQAQFLVASWQGQRWTKK
                     "
     gene            1539..>2880
                     /gene="rho"
                     /locus_tag="VIS53_01770"
     CDS             1539..>2880
                     /gene="rho"
                     /locus_tag="VIS53_01770"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF006886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEY5766541.1"
                     /translation="MARAKMDEKVETLESQTETAGEGVPPAHEQDAADTAAITAPRAL
                     DLNELQEFSEKKLKALARDFDLHLHPARSRHQHILDIVRAALAGGATVSAEGFVDQVS
                     DSFAMLRWPKLNFLPVPEDVAIPRTLIEQYDLRPGQKVAGTVRLPVQREKFLSLDKVT
                     KIEGQPAEEWKQSTAFDKLTPQFPQGRIILENPNTNSVCARAVDLLTPLGRGQRGLIV
                     APPRVGKTILLKEIAKAIRANYPEIVLILLLVDERPEEVTDLQREIDCEIYHSNFDEN
                     VQRHVQVAEMVLERGKRLVEMKYDVVLLLDSLTRLSRGYNNLEPGKGRIMSGGVEAKA
                     LIKPKKFFGSARNAEEGGSLTVLATALTETGSRMDELIFEEFKGTGNMELHLDRGLQE
                     KRIYPAIHPMLSATRREELLYHPEEWERVLMLRKTMGALPPLESMEKLIDNLQAT"
BASE COUNT          691 a          728 c          861 g          600 t
ORIGIN      
        1 caatgttttc gctggctgaa tcgcctaagc gtgcgggatt gctgtgggcg gggacagacg
       61 acggccggct gtgggtgaca gaaaacgacg gcggcaagtg gacggagtta acggacaatt
      121 tgcctgaggc ggcgcgcggt caatgggtgt cgcgcatcga gccctctcaa ttggatgcga
      181 atgtggcgta cgtcgctacc aatggttatc gcatgggtga tgatcgtccc tcaattttgc
      241 gcaccgccga tttaggaaaa acgtggcagt cggtcactgg cgatcttcca tcggcggatc
      301 ccgtcgaagt cgtgcgcgaa gacccggtga atccaaaact gctttatgca ggcacacatt
      361 tcggagtgtt cgcgtcgttt gatcaaggcg aacactgggt gcgcattggc gatattcctg
      421 cggtgcgcgt cgatgatatt cagattcatc cgcgcacatc agatttggtc attgccacac
      481 acggacggag cattgccatt cttgatgaca gcgttccgtt tcgcgagttc acaccggaaa
      541 tcgccgcaaa gccagctcac ttgttcagtg tgcggtccgt tactgccaga tatctgcaac
      601 ctggatttgt ggactcgaac ggcaaaagtg tttatcgcgg tgaaaaccca gccgaaggcg
      661 cattgttcac gatttgggtg cacgacttta caggcgatga aatcaaaatt gctgtcacga
      721 aaacaaccgg gcaacctgtg gcgaatctta aggcgcccgg cacgccaggc tttactcgtt
      781 tgaattggga tttacggccc accaaagatg tgagggtaga atatggcggt gaaaagccgg
      841 agcgatttct tgccgctggc gattacaccg ctgagctaaa tttcggcact acgaaaatga
      901 aacaaagttt ccatgtcgat ctcgccgaag gcatcacgcc ccggtgaggt ccgcgtcatg
      961 cctgcgattg ggattaccgg cggaatttcc acaggtaaga gcacgttcgt cgacggtctg
     1021 cgcaagcttg tgccggtcgc aatatttttc aatgcagacg aggcggctca tgcgttcctg
     1081 aatcggccag aggtcgaaaa acaaatccgg cgcgaatttg gggggcaagt gttttcaagc
     1141 gcgggcgact tgaatagaac aaagcttcgc gccatagtgt tcgccgacgc gaccaaaaaa
     1201 cgggcgctcg agcagatcct tcatccgcgg attcgccgcc aatggaggac agaggcgaaa
     1261 gagcatcgca attctcccaa gtttttcttt gctgacattc cacttcttta tgagaccggc
     1321 ggtgaaagct tgtgcgatcg agtggttgtg gtggcctgtt cggagaacgt gcagttggct
     1381 cgcttacgaa aacgaatgtc gatcagcagc gccgaagcca aacaaatgat tagctcgcaa
     1441 atgccactcg aggaaaaaat cagacgcgcg gatcacgtcg tttggaacaa cggggatcga
     1501 acctcgctta tggaacaggc gcaatttttg gtcgcatcat ggcaagggca aagatggacg
     1561 aaaaagtaga gacattggaa tcacagacag aaactgcagg ggaaggcgtg ccgcctgcgc
     1621 acgaacaaga tgcggccgac acggccgcca ttacagcacc acgcgcactc gatttaaacg
     1681 agctacagga gttttcggag aagaagctca aagcgctggc gcgcgatttc gatttgcatc
     1741 tgcatcccgc gcgatcgcgg catcagcaca ttctcgacat tgtgcgcgcg gcactggccg
     1801 gtggcgcaac cgtttcggcc gaaggatttg tcgatcaggt aagcgattcg tttgcgatgt
     1861 tgcgctggcc gaagttgaat ttcctgccgg ttcctgagga tgtggccatt ccgcgcacat
     1921 tgattgagca atacgacctg cggcccgggc aaaaagttgc cggtacggtg cgattgccgg
     1981 tgcaacgcga gaagttcctg tcgctcgaca aagtcacaaa gatcgagggt caacccgccg
     2041 aggaatggaa gcaatcgacc gcgttcgaca agctaacgcc acagtttccg caaggcagaa
     2101 tcatcctgga gaacccaaac acgaactcgg tttgtgcgcg cgcggtcgat ttgctaacgc
     2161 cgctcggtcg cgggcaacgc ggcctcattg ttgcgccgcc gcgggtgggc aagacgattt
     2221 tgctgaagga aattgcgaaa gcgattcgcg caaattatcc cgagattgtt cttatcctgc
     2281 tgctggtgga cgagcggccg gaagaagtga cggatttgca gcgggagatc gactgcgaga
     2341 tttatcattc aaacttcgac gaaaacgtgc agcgccatgt gcaagtggcg gagatggtgc
     2401 tggagcgcgg gaaacgcctc gtggaaatga aatatgacgt ggtgctgttg ctcgacagcc
     2461 tcacgcggct ttcacgcggc tataataatc tggagccggg caaaggccgc attatgtcgg
     2521 gcggcgtcga agcgaaggcg ctgattaaac ccaagaagtt tttcggctcg gcgcggaacg
     2581 cggaagaagg cggcagcctc accgtactgg ccacggcgtt gactgagacc ggcagccgaa
     2641 tggacgaatt gatcttcgaa gagttcaagg gtacgggcaa catggaattg catctcgatc
     2701 gtgggctgca ggagaaaagg atttatccgg cgattcaccc aatgctctcg gctactagac
     2761 gcgaggaatt gctttatcat ccagaggaat gggagcgcgt gctaatgctg cgcaaaacaa
     2821 tgggcgcgtt gccgccgctc gaatcgatgg aaaaactcat cgataacctg caagcgacca
//
LOCUS       DATDAJ010000073         2923 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_453901, whole genome shotgun sequence.
ACCESSION   DATDAJ010000073 DATDAJ010000000
VERSION     DATDAJ010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453901"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VIS53_01775"
     CDS             <1..207
                     /locus_tag="VIS53_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEY5766542.1"
                     /translation="QVLAQLDLWKNRDTYKVGVYVLAKKLDEEVARLHLEKIGVKLTK
                     LSEKQAEYLGIPVDGPFKSEHYRY"
     gene            complement(262..519)
                     /locus_tag="VIS53_01780"
     CDS             complement(262..519)
                     /locus_tag="VIS53_01780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766543.1"
                     /translation="MKSKEIEEIQGSFGPVALRALAVGAQSIGAIAVGAVALSAVAIG
                     FIAIGRLVIGRAKIKRLEIGELRVTRLHVTESIVTPNQPGQ"
     gene            complement(516..869)
                     /locus_tag="VIS53_01785"
     CDS             complement(516..869)
                     /locus_tag="VIS53_01785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766544.1"
                     /translation="MKKLLLIWVIAGATLAGMAGCAQTKKSAAQARPVPAGVRFDKVG
                     SVMLYPGEPCTPQIMFNFRSAGSTVWLGAPKHATKILTEAARNNRPVHISGKWRRGGQ
                     SNCSYVEVTSAEIAR"
     gene            complement(903..1421)
                     /locus_tag="VIS53_01790"
     CDS             complement(903..1421)
                     /locus_tag="VIS53_01790"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HEY5766545.1"
                     /translation="MNEFSYRSPKTEVRESKIHGRGLFARAAIAQDEVVAVKGGHIVD
                     GKTLREKITPVLGPVEIQIDDDLFIAPVSEEERDLSMLYSNHSCNPNLGMRGEITFVA
                     MRRIHTDEELTHDWAMTDDDDYSVECNCGAASCRRILTGKDWQRPDLQQRYAGYFSVY
                     LARKIALVNVRR"
     gene            1627..>2923
                     /locus_tag="VIS53_01795"
     CDS             1627..>2923
                     /locus_tag="VIS53_01795"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HEY5766546.1"
                     /translation="MKSRPAAVIFILVTVTLDILAMGLIIPVLPKLILDFLGGEMTDA
                     AKWTARFAVVFALMQFFFSPLLGVLSDRFGRRPIILLSNLGLGLDYIVMAMAPTLSWL
                     FLGRIISGITTSSIPTAMAYIADVTPKEKRAGAFGLIGVAFGIGFTFGPAIGGLAGDV
                     NPRLAFWIAAGLSLANWLWGYFFVPESLSREQRKAFELRRANPVGSLTLLRSHHELWR
                     LTTIQFLAYLSHNVFSVWALYAIYRYSWSQGMIGISLMIVGIVTAVISGGLTGRMVTR
                     FGEKRTLYIGQFFGASGMVIAGLAKTGAWLLASIPIISLWNISMPAAQSMMTHRVSER
                     EQGELQGALQSMRSITFIIGPWLFLRIFGWFVDPKNSVHLPGAPYFLAGALLFTAMLM
                     ATRIQQPEVPEVSTAPIPDVVPPETIPSGPITPIVNPKEN"
BASE COUNT          600 a          836 c          754 g          733 t
ORIGIN      
        1 caggtcctcg cacaattgga tctctggaaa aaccgcgata cctataaagt cggcgtttac
       61 gttttggcaa aaaaactcga cgaagaagtc gcgcgcctgc atctggaaaa aatcggcgtc
      121 aaacttacga agctgtcgga gaagcaagcc gaatacctcg gtattcccgt cgacggtccg
      181 ttcaaatcgg agcattaccg atattgatgt gacgcaggca atccgcctgc gtggttttag
      241 atgcagacac gattgtctgc gtcactgtcc cggctgattc ggcgtgacga ttgactcggt
      301 cacgtgcaac cgcgtcactc ttagctcacc aatttccagt cgcttgattt ttgcgcggcc
      361 gataaccagc cggccaatcg ctatgaatcc gattgcgact gcactgagcg caacagcgcc
      421 gaccgcgatc gcgccgattg attgcgcgcc gacggctaac gcgcgaagtg caacggggcc
      481 gaagcttcct tgtatttcct cgatttcttt tgatttcatc tcgctatctc cgcgctggtg
      541 acttcaacgt agctgcagtt cgattgtccg ccacgtcgcc attttcccga aatatgcact
      601 ggccggttat tccttgccgc ctcggtgagt attttcgttg cgtgcttcgg cgcaccgagc
      661 cagaccgtgg accccgcgct ccgaaaatta aacatgatct gcggcgtgca cggctcgccg
      721 ggatacaaca ttaccgaacc gactttgtcg aaacgcacac ccgccggcac cggcctcgcc
      781 tgagccgccg acttctttgt ctgggcgcaa ccagccattc cggcaagagt cgcccctgcg
      841 atgacccaaa ttaataaaag ctttttcata tcgattgaat tgaaactcct cgcggacggc
      901 tcctaccgcc gaacatttac tagggcgatt ttgcgcgcaa gatagactga aaaatagccg
      961 gcgtaacgct gttgcaaatc cgggcgttgc caatctttgc cggtgagaat tcgtcggcaa
     1021 ctcgccgcgc cgcagttgca ttccacggaa taatcgtcgt cgtcagtcat cgcccaatcg
     1081 tgtgttagtt cttcgtcagt atgaatgcga cgcatagcca cgaaggtgat ctcgccgcgc
     1141 atcccgagat ttgggttgca tgagtgattt gaatacagca tcgacaagtc gcgttcttct
     1201 tcgcttacag gcgcgatgaa cagatcgtcg tcgatctgaa tttccaccgg gccaagcaca
     1261 ggcgtaattt tttcgcgcaa agtttttcca tcaacaatgt gcccgccttt cacggccacg
     1321 acttcgtctt gggcaatagc ggctctggca aatagaccgc gtccgtgaat tttgctctcg
     1381 cgcacttccg tttttggcga gcggtaggag aactcgttca tcgcgcaaaa tagccaaggt
     1441 ggaacgcgtt gtcctcaacg cgttggcaaa aggtgccgct tcgtcgggtg gtatgcgcgc
     1501 cttcggcggt tacttggcat cgtcttcgga gccgtaacgg atgcgaagca acggccgggc
     1561 tttccacccg atccaccggc ggttgacaca accgccgcta ccacgttgcg ttcctgctcc
     1621 actgccatga aatcacgccc agccgcggtc attttcattc ttgttacggt gaccctcgac
     1681 atcctggcaa tgggcttgat tatccccgtt ttgcccaagc tgattctcga ttttcttggc
     1741 ggcgagatga ccgatgcggc gaaatggacc gctcgattcg cggtggtctt cgcgctaatg
     1801 caatttttct tttcaccctt gcttggcgtc ttgtcggatc gattcggaag acgtccgatt
     1861 atcctcctct caaacctcgg tctcggattg gattacatcg tgatggccat ggcacccacg
     1921 ctaagctggc ttttccttgg ccgaattatt tccggaatca cgacttcaag cattcctacc
     1981 gcgatggcct atatcgcgga tgtcacgccc aaagaaaagc gagctggagc attcgggctg
     2041 atcggcgtgg ccttcgggat tggattcaca ttcggaccgg caattggcgg attggcgggc
     2101 gatgtcaatc cacgtcttgc gttttggatc gccgccggtc ttagcctggc aaactggctc
     2161 tgggggtact tcttcgttcc ggaatcactc tcgcgcgaac agcgaaaagc ctttgaacta
     2221 cgccgcgcga atccagttgg ttcgctcaca ctacttcgtt cgcatcacga actttggcgg
     2281 ctcaccacga tccagtttct tgcgtatctt tcccacaacg tgtttagcgt ttgggcgctg
     2341 tacgccatct atcgctacag ttggagtcag ggaatgatcg gaatctcgtt gatgatcgtc
     2401 ggcatcgtga ccgcagtcat ttcaggaggc ctgaccggtc gcatggtcac acgcttcggc
     2461 gagaaacgga ccctttatat cggtcaattt tttggcgcaa gcggtatggt cattgccggg
     2521 ttggctaaaa cgggtgcttg gttgctcgct tcaatcccaa tcatctcgct ttggaatatt
     2581 tccatgccgg cggcccaaag catgatgact caccgcgtca gcgagcggga acaaggcgag
     2641 ttgcagggcg ccttgcaaag tatgcgatca atcactttca tcatcggacc ctggttgttt
     2701 ctccgaattt ttgggtggtt tgttgatcca aaaaattcgg ttcacctgcc gggagcgcct
     2761 tattttttgg ccggcgcact gctttttacc gcgatgctca tggcaacccg catccaacaa
     2821 ccggaggttc ctgaggtttc aactgctccc attcccgatg ttgtcccacc ggaaacgata
     2881 ccgtccggac cgatcacgcc aattgttaat ccaaaagaaa atg
//
LOCUS       DATDAJ010000074         2780 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_459596, whole genome shotgun sequence.
ACCESSION   DATDAJ010000074 DATDAJ010000000
VERSION     DATDAJ010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459596"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..741)
                     /locus_tag="VIS53_01800"
     CDS             complement(64..741)
                     /locus_tag="VIS53_01800"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HEY5766547.1"
                     /translation="MALPFEQFPALSAINICRHVFAQRIPGIDISHDKAQVLARLDAA
                     HREIRNATGFGDCPLFTAEQIHGNEIAVIDSRSRGPVGREFSACDGIITNQRSIGFGI
                     YVADCCAVYIVDPKTPAIGLVHSGRKGTELGVVTNAIRQMIERFGSDPADMVVQLSPC
                     IRPPHYEVDFASEIIRQCRALGVQHIHYSGTCTACDLGRYYSYRAEKGKTGRMLALIG
                     LDPTIVN"
     gene            complement(925..2568)
                     /locus_tag="VIS53_01805"
     CDS             complement(925..2568)
                     /locus_tag="VIS53_01805"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5766548.1"
                     /translation="MTRFFLCLGIVATFGILGQPGFAGTEGTYSGETTSRTRTISTAA
                     VPTFTLDQAILTALQRNPTLLNAEQEIKRTKGVIIQVRAQALPQINANANFQWTDPNL
                     TGARILGNTNNTSGFTPSTTAGSLMEGLPSQVGDFRAPVVAATPAPVRNVETSDISYA
                     ISVTGTQLIFNGTTFNQIRGTFFQRDSAYFAFRNVLDQLIAIVKTQFYQIIVNRDLVS
                     VNEENVRLLEAQLKDQQNRFEAGTVPRFNVLQADVQLHNQIPQLIAAQNNLRISKLQL
                     AKTLGLDFQRRRGDSPPLEVIGDMPYIPRPIELVDAIEMGKQRRAFLKQARANVLNQL
                     QQVRAAAGQWLPNITTTGGYEWVSSPINSSFNDISKGWTALVQGSLPIWDSGAIAGQV
                     IQQRALLSEAKITYDDDVRQVELEIQQAYSNLQQNRELIQSQEKNVELADEALRLAKA
                     RLDAGAGVQLDVLNATVQLLTAQSTRLQALFGYNSSLAEFDRATGAQSSYSEMFANLK
                     PHATTTKTYYTGSDVDAMGKPKEVFEERISTTTRRTSPK"
BASE COUNT          601 a          717 c          761 g          701 t
ORIGIN      
        1 attgcttcac cgtctaacta tgattagacg aaagttcgta aaacatggcg aattattttt
       61 cgtctaattc acgatggttg gatccagtcc aatcaaggcc agcatccgtc cagtttttcc
      121 tttttcagcg cggtatgaat agtagcggcc cagatcacag gcagtgcacg tgccagagta
      181 gtggatgtgt tgaacgccaa gtgcgcgaca ttgccggatg atttcagaag cgaaatcgac
      241 ctcgtagtgg ggtgggcgaa tacaagggct gagttgcacg accatgtccg ctggatcgga
      301 gccgaagcgt tcaatcattt gtctgatcgc gtttgtgacg acgccaagtt cggtgccttt
      361 gcggccggaa tgcacaaggc caatcgcagg cgtttttgga tctacgatgt aaactgcgca
      421 gcagtccgcg acgtaaatgc cgaaaccgat gcttcgttga ttggtgataa tgccatcgca
      481 cgcggaaaat tcgcgcccca cagggccgcg gctacggctg tcgattactg caatttcatt
      541 accgtggatc tgttcggcgg tgaaaagcgg acaatcgcca aagccggttg cgttgcgaat
      601 ttcgcgatgt gcggcatcga gccgtgccag cacttgggct ttatcgtggg agatgtcgat
      661 gccgggaatt ctttgcgcga aaacgtgacg acagatgttg atcgcgctta gcgcaggaaa
      721 ttgttcgaag ggtaaagcca tttttgcact tcaactctaa gctccagtat ccgcctcgcc
      781 attgtcatcc tgagtgaagc gaaggatctc agataatttc cgctgaatgc gaagagagca
      841 atcagagatg tttcgctctg ctcaacatga cagtaatccg aaattcgtgg aggttgccaa
      901 acgctctccc ggacttgaac gtctttactt ggggcttgtc cttcgcgtcg tggtagaaat
      961 tcgttcttcg aagacttctt tcggcttgcc catcgcatct acatcgctgc cggtgtaata
     1021 ggtctttgtc gtcgtggcat gcggtttgag gttggcaaac atctccgagt agctgctctg
     1081 tgccccggtt gcccgatcga attcagccag cgacgagttg tatccgaaca gcgcttgtag
     1141 acgcgtcgat tgcgctgtga gcagttggac cgtcgcgttc agcacatcca actgaacccc
     1201 tgcgcccgcg tcgagccgcg ccttggccag acgcaacgct tcgtcagcca gctcgacatt
     1261 tttttcctgg ctttggatca gctcgcggtt ctgctgcaaa tttgagtacg cctgctgtat
     1321 ctccaactcg acttgtcgaa cgtcgtcgtc gtaagtgatc tttgcttcgg aaaggagtgc
     1381 gcgttgctgg ataacctgac cggcgatcgc gccgctgtcc cagattggca ggctgccctg
     1441 gaccagtgcg gtccaacctt ttgaaatatc gttgaagctc gagttgatcg gtgagctgac
     1501 ccattcgtag ccgccggtcg tggtaatgtt gggaagccac tggcccgctg ccgcgcgcac
     1561 ttgttggagc tggttcaata cgtttgcccg cgcttgtttc aggaacgctc gtcgctgctt
     1621 acccatttcg atcgcgtcga caagttcaat tgggcgcggg atgtatggca tgtcaccaat
     1681 cacttccagc ggtgggctat caccacgtcg ccgctggaaa tcgaggccaa gagttttagc
     1741 cagctgcaac ttcgatatac gcaagttgtt ctgggcagca atcagttgcg gaatttgatt
     1801 gtgcagctgc acgtccgctt gcagcacgtt aaaccgtgga actgttcccg cttcaaaccg
     1861 gttttgctgg tctttcaact gagcttccaa aagccggacg ttttcctcgt tcacgctgac
     1921 gaggtcacga ttgacgatga tctggtaaaa ctgagttttc acaatggcga tcagttgatc
     1981 cagaacattg cgaaaggcga agtaagcgct gtcgcgttga aaaaacgtgc cccggatctg
     2041 attgaaagtt gtgccgttaa atatgagctg cgttccggta acactgatcg cgtaggagat
     2101 atcgctcgtt tcaacattcc taacaggcgc tggcgttgca gcgacgaccg gtgcacgaaa
     2161 atcgccgacc tgcgacggca gtccttccat cagcgacccg gcggtcgtgg agggtgtaaa
     2221 tcccgacgtg ttattggtat ttccaaggat gcgtgcgcca gtcaggttcg gatcggtcca
     2281 ttggaaattc gcattcgcat tgatctgcgg cagtgcctgc gcgcgcacct gaataattac
     2341 gcctttggtt cgtttgatct cctgctctgc gttgagaaga gtagggttac gctgcagcgc
     2401 cgtcagaatc gcttggtcca aagtaaaggt aggcacggcc gctgtggata ttgttcgggt
     2461 ccgagacgtc gtttcgccgc tatatgttcc ctcggtgccg gcaaaacccg gctgaccaag
     2521 aatcccgaac gttgcgacta tccccaggca aagaaagaac cttgtcatac agcgttagcg
     2581 gttagacgca caaagccggc gaatggattc aacgcagtct gataacattc ccgacagcca
     2641 aagcaaaatc atttcgactg acagtagtcg taaattttgc tgtaaatgtg cagccatgcc
     2701 ttttgctcgt ccggtgtgag gtgattcagt attttcataa cgttaccaac catttcctca
     2761 cgaattcggc ggacgagagc
//
LOCUS       DATDAJ010000075         3474 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_468788, whole genome shotgun sequence.
ACCESSION   DATDAJ010000075 DATDAJ010000000
VERSION     DATDAJ010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3474
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468788"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>3474)
                     /gene="carB"
                     /locus_tag="VIS53_01810"
     CDS             complement(<1..>3474)
                     /gene="carB"
                     /locus_tag="VIS53_01810"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY5766549.1"
                     /translation="MELNRNGALARHGVKLIGANAQAIAKGEDRQLFKEAMLRIGLEV
                     PRSGIARSLADLDRIVAEIGTFPLIIRPAFTLGGTGGGIAYNREELDEIAARGLDLSP
                     VREVLIEESLVGWKEFEMEVMRDRMDNCVVVCSIENFDPMGVHTGDSITVAPVQTLTD
                     KEYQMMRDAAFAVIREIGVETGGSNIQFAVHPEDGRMVVIEMNPRVSRSSALASKATG
                     FPIAKIAAKLAVGYTLDEIKNDITRETPACFEPTIDYCVVKVPRFTFEKFPQADATLT
                     TRMKSVGEAMAIGRTFKEALQKALRSLEIKRFGLLGDGADKDVDLEILRLKLAIPNAE
                     RIFYIAQAFQKGASIDEVYELTKIDRWFLRNVQQIVEEARFLETAPPSRAPRDVSSAR
                     KSGFQPDSADEPLARRVANQPADRPMTKSTEIVDVRFRGLDPQRPIVQKRGHLPHWEQ
                     SGATYFVTFRLADSLPADVLAPWKDERAAWLKLHPQPWDWKTAREYMRKFEEEREHWL
                     DQGHGSCLLREPQAAAIVAESLDHFDQQRYLIDSYVVMPNHVHVLFKPLGKHSLMDIL
                     HSWKSFTANVLNRKMNREGALWMHESFDTIVRDAEHLRVCRDYIAQNPKKAHLTPDEF
                     VLERRDVLLIDGETRSEASCLTRPSRCQPHVVLDEQDARQPSEAGSFTSDTAPADGAL
                     EREQLLRAKKLGFSDRQLAVANAVAESEIRSTRKTEGVTPTYRLVDTCAAEFEAYTPY
                     YYSTYGDENERRESDKRKIMILGGGPNRIGQGIEFDYCCVHAAFALRELGFETIMVNS
                     NPETVSTDYDTSDKLYFEPLTLEDVLNIYDQEQPEGVFVQFGGQTPLNLASGLEAAGV
                     PILGTQTESIETAEDRKLFAAMLDKLGLRQTPNGSATNAEEAVAIAKKIRYPVLVRPS
                     FVLGGRAMELVYTEADLRRYMTSAIEVTPDRPVLIDRFLEDAIEVDVDCISDGETAVI
                     GAIMEHIEEAGIHSGDSACVIPTFSLSQNVLDEISSATKAMARELNVRGLMNVQFAVK
                     GDEVYVLEVNPRASRTVPFVSKAIGVPLAKLAAKVMTGRSLLELGFTKEIVPKHFSVK
                     EAVFPFLRYEGLDISLGPEMKSTGEVMGIDIDLGLAYAKSQMAAPPPLPKRGRVFVSV
                     KDADKEAIIPV"
BASE COUNT          713 a         1020 c          925 g          816 t
ORIGIN      
        1 cgacgggaat gatcgcttcc ttatcggcgt ctttgacact gacaaagact cttccgcgtt
       61 tcggtaacgg aggcggcgca gccatctgcg atttcgcata cgcaagaccg agatcgatat
      121 cgatgcccat tacttcgccc gtcgacttca tttccggtcc gagagaaatg tccaaaccct
      181 cgtagcgcag aaacggaaag actgcttctt tcaccgagaa atgtttcggc acgatttctt
      241 tcgtgaatcc gagttcgagt aatgaccttc cggtcatcac tttggcggcc agcttcgcca
      301 atgggacgcc gatcgctttg ctgacgaacg gaacagtacg cgacgcgcgc ggattcactt
      361 ccagcacgta aacctcgtcg cctttcaccg cgaattgcac gttcatcaga ccgcgcacat
      421 tcagctcgcg cgccattgct ttggtcgcgg atgaaatctc gtctagaacg ttttgcgaca
      481 gggagaacgt cggaatcacg catgcgctgt caccgctgtg gatgcccgcc tcctcgatgt
      541 gctccataat tgcgccgatc acggccgtct cgccgtcaga gatgcaatcg acatcgacct
      601 caatcgcatc ctcaagaaag cgatcgataa gcaccggacg atcgggtgtt acttcaatcg
      661 cactcgtcat gtagcgtctc aggtccgctt cggtatacac gagttccatg gcgcgcccgc
      721 ccagaacgaa gcttggccta acgagcacag gatagcgaat tttcttcgct atcgccacgg
      781 cctcctcggc gttcgtcgcc gaaccatttg gcgtttggcg gaggccaagt ttgtccaaca
      841 tcgctgcgaa cagttttcgg tcttccgcgg tctcgatgct ttcggtttga gtcccaagaa
      901 tagggacgcc tgccgcttcc aatccgctgg cgagattcag cggtgtttgg ccgccaaact
      961 gcacaaacac accttcgggc tgttcctgat cgtaaatgtt gagcacgtcc tcaagcgtga
     1021 gcggctcaaa ataaagtttg tcgctcgtgt cataatcggt cgaaaccgtt tccggattcg
     1081 agttcaccat gatcgtttcg aatccaagct cgcgcagggc gaaggcggca tgcacgcagc
     1141 agtaatcgaa ttcaattccc tggccgatcc ggttcggtcc gccgcccagg atcatgatct
     1201 tgcgtttgtc gctctcgcgt cgctcgttct cgtcgccgta tgtcgagtag tagtaaggcg
     1261 tgtacgcttc gaactccgcc gcgcacgtat cgacgaggcg gtaggtaggg gtaacgcctt
     1321 cagttttcct cgtggatcga atttcgcttt cggcaaccgc attggcgacc gccagttgcc
     1381 gatctgaaaa acctagcttc ttcgcacgga ggagttgttc tctctcgagc gcaccatctg
     1441 cgggtgcggt atcggaagtg aagctgccag cttcactcgg ctggcgagca tcttgctcgt
     1501 ccaaaacaac gtggggctgg cagcgcgacg gccgagtcag gcaagatgcc tcacttcggg
     1561 tttccccatc gatgagtaac acgtcgcgtc gctccagaac aaattcgtct ggcgtcagat
     1621 gggccttttt gggattttgc gcaatgtaat ctcggcacac gcgcaaatgt tcggcgtcgc
     1681 ggacaattgt gtcgaagctt tcgtgcatcc acagcgctcc ctcgcgattc attttccgat
     1741 tgagcacgtt tgcggtgaat gatttccaag agtgcaaaat gtccatgagc gagtgtttcc
     1801 caagtggctt gaacagcacg tgcacgtggt tgggcatcac gacgtaggag tcgatcaaat
     1861 atctttgctg atcgaaatga tccagcgact ccgccacaat cgcagcagcc tgtggttcgc
     1921 ggagcaaaca cgagccgtgt ccttgatcca gccaatgctc gcgttcttcc tcaaatttgc
     1981 gcatgtactc acgcgcagtc ttccaatccc acggctgcgg gtgaagcttc aaccaggcag
     2041 cgcgttcgtc tttccacggc gcgagaacat cggctggaag tgaatccgcc aaccgaaatg
     2101 tgacgaagta agttgcaccg gattgttccc agtgcggcag gtgcccgcgc ttttgcacga
     2161 ttggccgctg cggatccagg ccacggaatc tgacgtcaac gatttcggtt gacttggtca
     2221 tcgggcggtc agccggctga ttcgctactc ggcgagcaag aggctcgtcg gccgagtcag
     2281 gctggaagcc tgacttccga gcggacgaga catcccgcgg tgcgcgcgag ggcggcgcag
     2341 tttccaggaa tctcgcttcc tccacgatct gctgcacatt tcgcaaaaac catctgtcga
     2401 ttttcgttag ctcataaact tcatcgatcg acgcgccttt ttgaaacgct tgtgcgatgt
     2461 aaaagattcg ttcggcattc gggattgcca gcttcaatcg cagtatttca aggtcgacat
     2521 ccttatccgc gccgtcacct aacaagccga agcgtttgat ctccaggctg cgcagcgctt
     2581 tttgcaacgc ttctttaaac gtgcgcccga tcgccatcgc ttcgccgacg cttttcatcc
     2641 gcgtcgtgag cgtcgcatct gcctgcggaa atttttcaaa cgtgaaccgg ggcactttga
     2701 ccacgcagta atcaatcgtc ggctcaaagc aggccggcgt ttcgcgagtg atgtcgtttt
     2761 taatttcgtc aagcgtgtag ccgactgcga gtttggccgc gatctttgca attggaaaac
     2821 cggtcgcttt cgatgccagc gcactggaac gcgacacgcg cgggttcatt tcaataacga
     2881 ccatgcgacc gtcttctgga tgcacggcga actgaatgtt cgatccgccg gtctcgacgc
     2941 caatttcacg gatcaccgcg aacgcggcgt cgcgcatcat ttgatattcc ttgtcagtca
     3001 gcgtttgcac aggcgcgact gtgatggagt cgcccgtgtg cacacccatg ggatcgaaat
     3061 tctcgatgga acaaacgaca acgcagttgt ccatccggtc gcgcatcact tccatctcga
     3121 attctttcca gccgaccagc gattcttcga tcaatacttc gcgcactggg gaaagatcca
     3181 ggccgcgcgc tgcgatctcg tcgagttctt cgcgattgta agcgatccca ccgccagtac
     3241 cgcccaatgt gaacgccgga cgaatgatta gcggaaatgt gccgatctcg gcaacgatgc
     3301 gatcgagatc cgcaagcgaa cgcgctatgc cagagcgagg cacttcgagg ccgatgcgca
     3361 acatcgcttc cttgaacaat tggcgatctt cgccttttgc gatcgcctgc gcattcgcgc
     3421 cgatcaattt caccccgtgc cgtgccaacg cgccgttgcg gttcaattcc atag
//
LOCUS       DATDAJ010000076         2828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_470843, whole genome shotgun sequence.
ACCESSION   DATDAJ010000076 DATDAJ010000000
VERSION     DATDAJ010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470843"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            31..882
                     /locus_tag="VIS53_01815"
     CDS             31..882
                     /locus_tag="VIS53_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766550.1"
                     /translation="MKPGKFTHAIAVLLSSISSLFAHGATSKAEPAKTKFSKKSEKSA
                     DDRVLDVSSLAFTPGQLAVERLQPGQRYPWKSNIVTTIFWIGEKPSDNNPVPNRVSSW
                     DNQWTKNYGGMDDPNPSHRSNYMPVKFTPGLNPFYCALPYNDKAKEGHRPEASRVVPW
                     FNEAYQGPAVSTCKGRWIAIRKGNRTAYAQWEDAGPFRTDHWQYVFGNERPKPNLNKG
                     AGLDVSPAVRDYLGLQPTDVTDWRFVEFSEVPRGPWSTHGENNTFVINDRAKGKALVE
                     RLSAIVR"
     gene            1298..2551
                     /locus_tag="VIS53_01820"
     CDS             1298..2551
                     /locus_tag="VIS53_01820"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY5766551.1"
                     /translation="MHRVVRGSLFVAFIGVINLASSIGIPANADVVTDWNNAVLDAIR
                     ADRTAPPIASRSLAILHTSIYDAVNGIARTHEPYLVPSAVPASASRVAAASAAAHQSL
                     VSLFPSHTSSFDALHTAILATIPNSPHKTAGLAWGEFVASQILAARATDGSNAIVQPP
                     GGSGPGVWIPTPPAFLPYLLPQWGFVAPFAISSSSQFRPPGPPSLDSQRYAADYEEVK
                     QLGAAVGSTRTEDQTEIALFWADGAGTETPPGHWNSIAQTIAETRDTTLEENARLFAL
                     LNVAMADAAICSWDAKYTYHFWRPVTAIAFAEPQLNWRSFIVTPPFPDYTSGHSTFSA
                     AAATVFPLFFGTEDLPFTTGSDFLPGVYRSFSTCQDAAEEAALSRIYGGIHFRSASED
                     GLQAGTSIGEWTVTHYLLPKGNHSR"
BASE COUNT          649 a          808 c          751 g          620 t
ORIGIN      
        1 cctgttttgc gctcgcgtta ataacaacaa atgaaacctg gaaaatttac tcacgccatt
       61 gccgtcctgc tttcgtccat ctcatctctt ttcgcacatg gcgccacatc gaaggcagaa
      121 cctgcgaaaa cgaagttcag caaaaaatct gagaaatcag cagacgatcg cgtgctcgat
      181 gtcagttcac tcgcgttcac gccgggccag ttggccgtag aacggcttca accgggacag
      241 cgttacccgt ggaaaagcaa catcgtgacg accatcttct ggatcggcga aaaaccgtcc
      301 gacaataatc ccgttcccaa tcgggtgagc tcatgggaca accaatggac taaaaattac
      361 ggtgggatgg atgaccctaa tccttctcat cgcagcaatt atatgccggt gaaattcacc
      421 ccggggctta atccgttcta ctgtgcattg ccctataatg acaaagcgaa ggagggccat
      481 cgtcccgaag cgtcgcgtgt cgttccctgg ttcaacgaag cgtatcaggg ccccgcggtt
      541 tccacctgca aaggccgatg gattgcgatc cgcaaaggca atcgaaccgc gtatgcgcag
      601 tgggaagatg ccggaccatt ccgaacagac cactggcaat atgtcttcgg gaacgaacgg
      661 ccgaagccta atctcaacaa aggcgccggc ctcgatgttt cgcccgctgt gcgcgattac
      721 ctcggattgc aaccaactga cgtcaccgac tggagattcg tggaattcag tgaagtgccc
      781 cgcggtccgt ggtcaacgca cggcgaaaac aacacattcg ttattaacga tcgcgcaaag
      841 ggtaaggccc tggttgaacg actgagcgcg atcgtgcgct aaagaaaagc gactctcgcg
      901 gttcctcgca gagcgttagc agactacaga cgatttttcc gccagatact ccgcaggtcc
      961 attctttaat gggccacgcg ggtgggaaag cctctagagc gaaggtttct tcggttttcc
     1021 cgctttccgg atgcgtttga aattcgtcgc ttggcatgag cttgattgac actgcggaga
     1081 tgtacggtga tgacgggcgg agaggattat cgcggaatca atcccagaac aacaccaagg
     1141 cgttttagtg attacgaaag tttatccgca taatgcgtta cagacggaac ccccaaaagc
     1201 gcgtgagcgc tcggaatagc ggatcagatc ggccttgaca cccgggtctg ctaaacccta
     1261 caagaggtca ttcgatttac ctaaggaggg gactgctatg catagggttg tcagaggttc
     1321 gcttttcgta gcgtttattg gcgtcatcaa tcttgcctct agcatcggta ttcctgccaa
     1381 tgccgatgtt gtcaccgact ggaacaacgc cgtactggat gcaattcgcg ccgaccggac
     1441 cgcgccaccg attgcctccc gcagcctcgc cattcttcac acgtcaattt acgacgcggt
     1501 caatggcatc gcgcgcaccc atgaacccta cctggtgcca agcgcggttc cggccagtgc
     1561 gtctcgcgtt gcagctgcaa gcgccgctgc gcaccagtcg cttgtcagcc tgtttccaag
     1621 ccacacatcc agctttgatg cgcttcacac cgcgattctc gccacgattc ccaatagccc
     1681 gcataaaacg gcaggcctcg cgtggggcga attcgtcgcg agccaaatcc tcgcggcgcg
     1741 ggcgactgat ggttccaatg cgatcgttca gccacctggc ggcagtggtc ctggtgtttg
     1801 gattcccacg cctccggcat ttcttcctta tttgttgccg caatggggat tcgtcgcgcc
     1861 atttgcaata agcagcagct cacagtttcg tccgccggga ccgccctctc tagacagtca
     1921 gcggtacgcg gcagattacg aagaagtcaa acaactcggc gcagctgtgg gttcaacacg
     1981 cacggaagac cagaccgaga tagcattatt ttgggctgat ggcgcgggca ccgaaacgcc
     2041 tcctggccac tggaacagca ttgcgcagac catagctgaa acgcgagaca ccacgttgga
     2101 agaaaacgca agattgtttg cgctcttgaa cgttgcaatg gcagacgccg ccatttgctc
     2161 ctgggatgcc aagtacacct accatttctg gcgaccggta accgcgattg ccttcgccga
     2221 gccgcaactg aactggaggt cattcatcgt aaccccacct ttccctgatt atacctccgg
     2281 gcacagcacg tttagcgctg ctgccgcgac tgtgttcccg ctgttttttg ggacggaaga
     2341 tctgccgttc acgaccggct cggattttct tcccggagtg taccgcagct tttcgacgtg
     2401 ccaggatgca gctgaggaag cggcattgag cagaatatac gggggcattc acttccgatc
     2461 tgcaagcgag gacggattgc aagctggaac cagtatcggc gaatggaccg ttacccatta
     2521 cctgctgccc aagggaaatc attcgcggtg acgcgttaat aacaaaacgc acatcggtcc
     2581 acatccgagc gcgctcgatg cgattgccta ctcgattgtt gtcctggcag taagtggaat
     2641 catttttggc gtaatctggg ccgaacaaaa atctcttcgc gcttatgctc attcatgctg
     2701 tgggcgacct actgccgaat ttcgcgagat tcgtccggac gtgatcttaa cgaaggacgg
     2761 tgactgccgc tcagcgccgt gaagatgccg attccgctgg cgagaagtca aattcccaag
     2821 ccggagag
//
LOCUS       DATDAJ010000077         9575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_479883, whole genome shotgun sequence.
ACCESSION   DATDAJ010000077 DATDAJ010000000
VERSION     DATDAJ010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9575
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479883"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..857)
                     /locus_tag="VIS53_01825"
     CDS             complement(258..857)
                     /locus_tag="VIS53_01825"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY5766552.1"
                     /translation="MKANQPTVYGVTKIAQLFPSIRKIKNKSLREKVAAVWSEAITTG
                     CGGKGWTFAELRAVKFTLLAGDIKMTFVEHLNSCARQCTAIADVLKKSFRCSIPIQRD
                     YLIAGALLADVGKPLEFDKDASGNVIQGKFGQQVRHPFSGVALAYKHGIPGEVLHIIA
                     THSHEGDKMERSIESIIFHHADFVDFDIAKLLGKRAAKK"
     gene            complement(954..1361)
                     /locus_tag="VIS53_01830"
     CDS             complement(954..1361)
                     /locus_tag="VIS53_01830"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5766553.1"
                     /translation="MKKTRYLDHIDLRVSDLKRAHKFYGKLLPALGFSCDRSSGRWGI
                     FYAAGGGKPDAFFGFTQDRRHQPNGTRLAFWAETREEVDRLARLVRKIGGKCLEGPEV
                     CRAYSRGYYACFFEDPDGNKLEICCRESPVIPG"
     gene            complement(1358..1633)
                     /locus_tag="VIS53_01835"
     CDS             complement(1358..1633)
                     /locus_tag="VIS53_01835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766554.1"
                     /translation="MTSEKIMTKHPLGKSGKNIDRKKYDTLKKAILSALRKNELTHTE
                     LFSRLNKSLKGKFSGNISWYGETVKLDLEARELIERTASKPQKYRLK"
     gene            1810..2160
                     /locus_tag="VIS53_01840"
     CDS             1810..2160
                     /locus_tag="VIS53_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEY5766555.1"
                     /translation="MPTYEYSCEKCGQTFEAFQSMRDEPFRECPKESCRLPKWGHGKV
                     KRLLGTGAGLIFKGSGFYSTDYRSESYKAAAKKESAPKASEGGDKSSKTEPAKTSSSG
                     ETKTAEKKSAKESA"
     gene            complement(2232..2681)
                     /locus_tag="VIS53_01845"
     CDS             complement(2232..2681)
                     /locus_tag="VIS53_01845"
                     /inference="COORDINATES: protein motif:HMM:NF015168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HEY5766556.1"
                     /translation="MKIPRLFLFAAAVSLVFAPFARAESDWLHDWNKAQEEAKANHKL
                     LFLNFTGSDWCGWCIKLDKDIFSQPQFKDYAHQNLVLVELDFPRKKSQPTEERKQNVQ
                     LAQQYEVLGFPTIVVLNSSGQKVWQFDGYFPGGPEAFISQLQKLPKG"
     gene            complement(2811..3089)
                     /locus_tag="VIS53_01850"
     CDS             complement(2811..3089)
                     /locus_tag="VIS53_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIB/MDM2 domain-containing protein"
                     /protein_id="HEY5766557.1"
                     /translation="MPKTKKTSKRKPNPAFMRPVQPDDKLAAVVGSQPLSRPELTKKL
                     WAYIKRRGLQDKKKRIMINADDALRPVFNGKSQVSMFEMTKLVSKHLR"
     gene            complement(3153..4406)
                     /locus_tag="VIS53_01855"
     CDS             complement(3153..4406)
                     /locus_tag="VIS53_01855"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEY5766558.1"
                     /translation="MFRLLRFGDKEEHKYNTPVCVIRIEVQMRDNSHAEILVVDDDAM
                     SRRVLAQLLSAAGYNCRVSNDGSEALKAIHAQPPSVLLLDFDMPGLNGAEVLRRLRSD
                     DDPTVAQIPAIMLTAHGSEQSEVSCLQAGANDFVTKPVNASVLRARIETQLRLRSMRR
                     QLERQNNELEKWRRDLERDLAAARLTQQSLIPQKPLLLPGWQIATCYHPVIQVGGDIY
                     GWLRMKDGRVLFWIADGTGHGAAAALLTTLAKLLFHHGSMDHDSPATLMEGVDNDFRS
                     IFGATSFMTAMCVALDPATGHAQVVGAGHPSLLIVHHDGTTESIASVAPPLGLIKRTA
                     FTETAIELEPGDAFLLYTDGLFRWAKDERNPMTPGQLKKVLDHSAPTAEALLKGIVAQ
                     TAPKNSAKTAPDDVAAIAVRREDRQ"
     gene            4467..4862
                     /locus_tag="VIS53_01860"
     CDS             4467..4862
                     /locus_tag="VIS53_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766559.1"
                     /translation="MKFSIPLALLAVFFLASCAEEPPPPPTQRHRPSTYAPTQPQEYP
                     PPQQPFNPNGPVQPMATPPPVIASSPPPAAAPPTKVAKGDYPYGVPVPGKPHLVESPY
                     SPGKYIDVEGFPPGTEVKDPYTDKIFLVP"
     gene            4970..6319
                     /gene="aroA"
                     /locus_tag="VIS53_01865"
     CDS             4970..6319
                     /gene="aroA"
                     /locus_tag="VIS53_01865"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEY5766560.1"
                     /translation="MELRIKRAPRIDLEITVPGDKSISHRAVIVAALSNGVCTLRGFL
                     PSDDCMHTVNAMRALGIKIEQPEPTTLVVHGKKRVLTAPNQEINCGNSGTTMRLLAGL
                     LAGQKFESRLVADPGLSKRPMDRVIAPLCEMGASVVAEGPDGTPPLRIHGGSLRGIQY
                     RPSAASAQVKGALLLAGLFAKGKTTVEEPVPTRNHMEKMLNYFMVRSTTEDDGSVSVF
                     GEQVPESRDFDIPGDISSAAFWLVAAAAQSRGHLLIRDIGLNDTRTAMLGVLLRMGAH
                     VREAIEDIEHVEPRGVVEVTGVPLKATVIQGKEVPQLIDELPVLSIAAVLASGKTTIR
                     HAEELRVKETDRIAAIAHNLRTMGAQVAELTDGLEIYGPAPLHGARLPSFGDHRIAMA
                     FAVAGLFAEGETIIQDAECIRESYPGFEAVLEEFTNPKRMQISTPVIGSLTPVPAQE"
     gene            6342..7037
                     /gene="cmk"
                     /locus_tag="VIS53_01870"
     CDS             6342..7037
                     /gene="cmk"
                     /locus_tag="VIS53_01870"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEY5766561.1"
                     /translation="MGSYASHHRVIAIDGPAASGKSSVARKLARQLGFIYVNSGAIYR
                     AITWHLLQNRIRPDEGERISEALDSAALACVVRDGEARIVVDDADPGEHLREDRVNES
                     VSRVSKSPRVRDIVSERLHDCAEGHDVVIEGRDIGSVVFPDTPYKFYIDASPEVRLQR
                     RAAQGERDEITIRDRDDVSRAVSPLVKAKDAHLIDTSHVTVEQVVRQIMMRLEQAGLP
                     ISDVQITNRALGE"
     gene            7034..7648
                     /locus_tag="VIS53_01875"
     CDS             7034..7648
                     /locus_tag="VIS53_01875"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5766562.1"
                     /translation="MNFYYWVGYHLSRLTGRVLFRFRVIHRERMIQSGPVILAMNHQS
                     YLDPPLAGSTCDRAIYFLARRTLLDVPLLGRVLPKLNVIPVNQEGVDRSAIKAVIRVL
                     QAGDGVLLFPEGSRTLDGNLQIAEPGLGLIIAKTLAPVVPMRIFGAREALPRGSGRLR
                     LVPITIVIGEPIVFTPADVDSPKKNRYALLSQRVMDAIAALQLE"
     gene            7735..9522
                     /locus_tag="VIS53_01880"
     CDS             7735..9522
                     /locus_tag="VIS53_01880"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEY5766563.1"
                     /translation="MKRIFIVPLAVFLAVFCSCQKQQTEEERNAEIERRVEQRLASER
                     QAQTEQDLAQRQAELEAREKALAEQQQVTAHAAATVSAETPLHVAKQPTASYSTFHRK
                     LEPYGAWRETSNYGFVWQPNEAERSRSWRPYTNGRWVYTDAGWTWVSEEPFGWATYHY
                     GRWTRLRNIGWVWLPGEEWAPAWVSWRKSNDYIGWAPLPPEARFDRRAGIQNWADSYY
                     DIGPEQYCFVPTNEFGARRVETVLVPPTRNVTIVAQTTNVTNITYNNVTIVNQGPSYD
                     EVRARARQPVERLRLERQTSIDIETDTPKSVIRGEVIQMPAPVIAKGESIQRPRTVKE
                     TVAQPIVERGWEGITDQQAVRKAREKIKSESTLPANAPPKTFAKPAEAASAETSPAVS
                     PHTFGSPTSPSALGSSPIPAATALPVAPAMLPRSVGPSRRPVGFAPSATPFRRANPVS
                     PAAPVITSSPTPAPAASLTPAATRPPFTRTAPEISASPSLSPGNSASVSGSPSFGRPA
                     EGRELRRRQIELKKQQRATEEKLGPRHLDASPNESAATATPGGSKALATSSPAEPREK
                     PEKTKHKRERPGDSEGIGIVSPSPSVAPQ"
BASE COUNT         2134 a         2635 c         2658 g         2148 t
ORIGIN      
        1 aagcccatcc gcatgacgcg ccgcaatctt ttcaacaagt gtaaggccca tatcactttg
       61 ggattactca cgactcacac gaagacagga ctctacccat ttcgcaaatg tcattctgag
      121 cgaagcgaag aacctctgat cacttttcga ccgactcccc aaagagaata gatccagatg
      181 tttcgcttcg ctcaacatga cagtcctaat taatgaagcg gaaaattcgc gtcaattcgt
      241 gtgtttcgtg ggcaaaatta ttttttcgcg gcgcgctttc ccagcaactt ggcgatatcg
      301 aaatctacga agtctgcgtg atggaaaata atagattcga tcgagcgctc catcttgtca
      361 ccttcatgac tgtgcgttgc gatgatgtgc aagacttccc cgggtatgcc gtgcttgtag
      421 gccagcgcga cgccgctgaa gggatgccgc acctgctgcc caaacttgcc ttggatcacg
      481 ttacctgacg cgtccttatc aaactccagc ggtttgccca catccgccag aagcgcacct
      541 gcgatgaggt agtcgcgctg aatgggaatg ctgcagcgga aagatttttt gagcacatcg
      601 gcgatggcgg tgcattgccg agcgcaggaa ttgagatgct cgacgaaagt cattttaatg
      661 tcgccggcga gcagagtgaa cttgaccgct cgaagttcag cgaatgtcca gcccttcccg
      721 ccgcaccctg tggtgatagc ctcgctccag accgcagcga ccttttcgcg cagcgatttg
      781 ttcttgatct tcctgatgct gggaaagagt tgtgcgattt tagtgacgcc gtagacggtt
      841 ggttgatttg ctttcatcgt gcgacggtaa ttctcgctaa aacgcgatgt gtcgacaagt
      901 actctgcgat cactccgcaa gtagctggga cggggccagg cgaatgctga ccgctaaccc
      961 gggataaccg gactttccct gcaacaaatt tctagtttgt ttccgtccgg atcttcaaaa
     1021 aagcaggcat aatagccgcg gctgtaagcg cgacagacct ccggaccttc caagcatttt
     1081 ccgccgatct tgcgcacgag ccgggccaac cgatccactt cttcacgggt ctcagcccaa
     1141 aaagcgagtc gcgtgccatt gggctgatga cgtcggtctt gcgtgaagcc gaaaaacgca
     1201 tccggcttgc ctccgccagc cgcatagaag attccccaac gtccgctcga gcgatcgcag
     1261 gaaaaaccga gtgctggcag cagctttcca taaaacttgt gtgcgcgctt caggtcgctc
     1321 acacgcaggt caatatggtc caagtagcgc gtctttttca tttcagccga tatttttgag
     1381 gctttgaagc ggttctttcg atgagttctc tggcttccaa atcaagctta acggtttcgc
     1441 cgtaccaact gatatttcct gagaacttgc cttttaagct cttgttgagg cggctgaaca
     1501 attcggtgtg cgtgagctca ttttttcgca gggctgacag gatagccttc ttgagcgtgt
     1561 cgtatttttt tctgtcgata ttcttcccgc ttttacccag agggtgtttc gtcattattt
     1621 tttcggaggt cattttgctt cttccttctt gatactcctg ttcgtaccga cgttcatgtc
     1681 ggtgaacctc acaagcatgg gtttgggccg gctttgttca attaggcatc agtcgggttg
     1741 aattgtaatt tgtttaatgc agacttccca gcgtcgttcc tgaaagcgtg gagcccagct
     1801 aaactgctca tgccaaccta tgaatattcg tgtgagaagt gcgggcagac tttcgaagcg
     1861 ttccagtcga tgcgcgatga accgtttcgc gaatgtccga aggagtcttg ccggttgcca
     1921 aagtggggac acgggaaggt gaaacgttta cttggtaccg gcgcgggtct gattttcaag
     1981 ggctcgggat tctacagcac tgattatcgc agcgaatcat acaaagcagc tgccaaaaag
     2041 gaatctgcgc cgaaagcatc cgaaggcggc gacaaatcct caaaaaccga gccagcaaaa
     2101 acttcttcgt ccggcgagac gaagacagcc gagaagaaat cggcgaaaga atccgcctga
     2161 tgttttagca acagcgacgc gaatttgcac caacgcggaa tgcttaccga gaaatttgga
     2221 tcgggcgtgc cttaaccctt tggcaacttt tgcagctgcg agatgaacgc ttccgggccg
     2281 ccggggaaat aaccgtcgaa ctgccacacc ttttggccgc tgctattcag cacgacgatg
     2341 gtgggaaatc caagaacttc gtactgctgg gccagttgaa cgttttgctt tctctcctct
     2401 gtgggctggg attttttgcg aggaaaatcg agctccacca gcacgagatt ttggtgcgcg
     2461 tagtctttga actgcggctg cgagaaaatg tccttatcga gtttgatgca ccacccgcac
     2521 cagtcagacc ctgtaaaatt gaggaacaga agtttgtgat ttgctttcgc ttcttcctgc
     2581 gccttgttcc aatcatgcag ccaatcggat tccgcccgcg cgaagggagc gaaaacaagc
     2641 gagactgcgg ctgcgaagag aaataatcga gggattttca ctccaccata ttcgatgcag
     2701 ttgcagcccg gcgcaagagc ggtacaacgc accgcccggg gcagctatta ttttttcaag
     2761 cctgcaatag cccgacgcgg caacgccggg ctgtcgcagg aaatcgtgat ctagcgcaga
     2821 tgcttcgaga cgagtttggt catctcgaac atgctcacct ggctcttgcc attaaatacc
     2881 ggcctgagcg cgtcgtcggc gttgatcatg attcttttct ttttgtcctg cagaccgcgc
     2941 ctcttgatgt atgcccaaag cttttttgta agctccggcc gtgatagcgg ctgcgaaccg
     3001 acgacagcag caagcttatc gtccggttgg accggtctca tgaaggcggg attcggtttg
     3061 cgcttggaag tttttttggt tttcggcatg gacgctgact aacgtttcgc ctgcgggaga
     3121 gcaagactaa atttgagcta aataaaaaat ttttattgcc ggtcctcccg gcgcacggcg
     3181 attgctgcca catcatcggg agcagtcttc gcagaattct tgggagctgt ttgcgctacg
     3241 atccctttga gcaacgcctc ggcggtgggc gcggaatgat ccagaacttt tttgagctgc
     3301 cccggagtca tcggattgcg ctcgtctttc gcccagcgga acaacccatc ggtgtagagg
     3361 aggaaagcat cgccgggctc aagttcgatc gctgtttcag tgaatgccgt tcgtttgatc
     3421 aagcccagtg gcggcgcgac cgaagcgatc gattccgttg tgccgtcgtg atgaacaatc
     3481 aagagcgacg ggtgccctgc gccgacgacc tgagcgtgtc cggttgcggg atcaagggca
     3541 acacacatcg cagtcatgaa tgaggtcgct ccaaagatgc tgcgaaaatc attatccact
     3601 ccttccatca aggtggccgg cgaatcgtga tccatgctgc cgtggtgaaa aagaagtttt
     3661 gccaacgttg tcagtaacgc ggcagccgca ccgtgccctg tgccatctgc gatccagaac
     3721 aatacccggc cgtccttcat tcggagccag ccataaatgt cgccgccgac ttggatgaca
     3781 ggatggtagc atgttgcgat ttgccaaccc ggcaacaaca gcggtttctg cggtatcaat
     3841 gattgctgcg tcaggcgtgc ggccgccaga tcgcgctcca gatcacggcg ccatttctcc
     3901 agttcattgt tttgccgttc gagttgtcgc cgcattgagc gaagccgcag ctgcgtctcg
     3961 attcgcgccc gcaacaccga cgcattgaca ggcttggtca caaaatcgtt cgcacctgcc
     4021 tgcagacagg agacctcgct ttgctcgctg ccatgtgccg tcagcatgat agccgggatt
     4081 tgtgcgaccg tcggatcgtc gtctgagcga aggcgcctaa gcacctcggc gccgtttagg
     4141 cccggcatgt cgaaatccag aagcaaaacc gaaggcggct gcgcgtgaat tgccttcagc
     4201 gcttcggaac catcgtttga gacgcggcaa ttgtaaccag cagcgctgag tagttgggcc
     4261 aataccctgc gactcattgc gtcatcatcg acgactaaaa tctctgcgtg tgaattgtct
     4321 cgcatctgta cttcgattcg gattacgcac accggcgtat tgtatttgtg ctcctctttg
     4381 tcaccaaatc gaagcagcct gaacaaagcg tgatttaatc attggcaacg ggtctgactc
     4441 cggatacgat tagcaaaatt ttcattatga aattttcaat cccgcttgct ctcctcgcgg
     4501 ttttcttttt ggcctcatgt gctgaggagc cgccaccacc accaacgcag cgccatcggc
     4561 cgtcgactta cgccccgacc caaccgcagg aatatccacc gccgcagcag ccatttaatc
     4621 cgaacggacc ggttcagcca atggctacac cgccgccggt catcgcatct tcacctccgc
     4681 ccgcggctgc gccgccgaca aaggtggcaa agggagatta tccgtacggg gtccctgtcc
     4741 cgggcaaacc gcatctggtg gagagcccgt actcgcccgg caaatatatc gatgtggaag
     4801 gattccctcc cggcactgaa gtgaaggatc cttacaccga caagattttc cttgtgccat
     4861 aacacgagcg gttccggagt tcgctcatgg gcgaagtgaa tgccgggtta acgctgcacg
     4921 gcctttatgc gagtatccgg cagaatatca ggacgtttag attgattcta tggaattgcg
     4981 gataaaacgc gcgcctcgga tcgatctcga aattactgtg cccggcgata agagcatttc
     5041 gcatcgcgcg gtgatcgtcg ccgctctctc caacggcgtg tgtacgctgc gcggatttct
     5101 ccccagcgac gattgcatgc atacggtgaa cgcaatgcgc gcgctgggaa tcaagatcga
     5161 acagcctgag ccgacgacgt tagtcgttca cggaaagaag cgagtcctta ccgcgccaaa
     5221 ccaggaaatc aattgcggca attcgggtac gaccatgcgg cttctcgcgg gtctactggc
     5281 cgggcaaaaa tttgagagcc ggctggtggc ggatccgggc ttgtccaaac ggcccatgga
     5341 tcgagtgatc gcgccgcttt gtgagatggg cgcgagcgtc gttgctgaag gtcctgacgg
     5401 tacgccacca ttgcgcatcc atggcggatc acttcgtgga attcaatacc gcccatcggc
     5461 agcgagtgca caagtgaaag gcgccctgct gctggccggt ctctttgcga aaggcaaaac
     5521 caccgttgaa gaaccagtgc cgacgcgaaa tcacatggag aagatgctca attatttcat
     5581 ggtgcgatcc acaaccgaag atgacggcag cgttagcgtt ttcggtgagc aggttccgga
     5641 gtcacgcgat ttcgacattc ccggcgacat ctcttcggcg gcgttttggc tggttgccgc
     5701 tgcggcgcag agccgtggac atctgctgat tcgcgacatt ggattaaatg atacgcgaac
     5761 ggccatgctg ggcgtgctcc tccgaatggg tgcgcatgtt cgagaagcga tcgaggatat
     5821 cgagcacgtt gaaccgcgcg gagtggtgga agtcaccggg gtaccgctaa aagccacggt
     5881 tattcaaggg aaagaagtgc cacagctcat tgacgagttg ccggttttgt ccatcgcagc
     5941 cgttctggcg agcggcaaaa cgaccatccg gcatgcagag gaactgcgcg ttaaggaaac
     6001 cgatcgcatt gccgcgatcg cgcacaatct gcgcaccatg ggcgcgcagg tcgccgagtt
     6061 aactgatggg cttgaaattt atggaccagc gccgttgcac ggagcgcgtt tgccgagctt
     6121 tggcgatcat cgcattgcca tggcctttgc tgtagcgggc ctgtttgctg aaggcgagac
     6181 gattattcag gacgccgaat gtattcgtga atcgtatccc ggattcgaag cagttcttga
     6241 agaatttacc aacccgaaac ggatgcagat tagcacgccg gttatcggtt cactcactcc
     6301 tgtccctgca caggagtagt ttcgttaggc actaactaca catgggatca tacgcttccc
     6361 accaccgtgt gatcgccatt gatggtcccg ctgcttcggg aaagagcagc gttgcgcgga
     6421 agcttgcccg acaactagga tttatctacg tcaactcggg tgcaatctat cgagcgatca
     6481 cctggcatct ccttcaaaac aggattcggc ctgatgaggg cgagcgcatc tctgaggcgc
     6541 tggattcagc ggcgcttgca tgcgttgttc gagatggcga ggcgcgcatc gttgtggatg
     6601 acgccgatcc cggcgagcat ttacgcgaag accgtgtgaa cgagagcgtt tctcgtgtca
     6661 gcaaatcacc gcgagttcgc gacatcgttt cagagagact tcatgactgt gctgaggggc
     6721 atgacgtggt aatcgaaggc cgcgacattg ggtcggtcgt tttccccgac accccctaca
     6781 aattctatat cgatgcttct cctgaggtgc ggctgcaacg tcgtgccgca caaggtgagc
     6841 gcgacgaaat caccattcgc gatcgcgatg atgtctcacg ggccgtctca ccactcgtaa
     6901 aagcgaaaga cgcgcacctg atcgacactt cgcatgtcac tgtcgaacaa gtggtgaggc
     6961 agataatgat gcggcttgag caagcgggtt tgccgattag cgatgttcag atcacaaatc
     7021 gcgcgctcgg cgaatgaatt tctattattg ggttggctac catttaagcc ggctgaccgg
     7081 ccgagtgttg tttcggtttc gcgtcattca tcgggagcgc atgattcaaa gcgggccggt
     7141 gattctggcg atgaatcatc agagctatct cgatccgcca ctagccggga gcacgtgtga
     7201 tagagcgatt tattttctcg cccggcgaac gcttctggac gtaccgctat tggggcgtgt
     7261 tttgccaaag ctgaacgtga tcccggtgaa tcaggaaggc gttgatcgca gcgccatcaa
     7321 agctgtgatt cgcgttttac aggccggtga cggcgtcctg ttgttcccgg aaggctcacg
     7381 caccctcgac ggcaaccttc aaattgcgga accgggattg ggtttgataa tcgccaaaac
     7441 gctcgcgccg gtcgtgccga tgcggatctt cggcgctcgc gaagcgctgc cccgcggcag
     7501 cggccgactt cggcttgtgc caattacgat cgtgattgga gaaccgattg tttttacgcc
     7561 agccgacgtg gattcaccaa aaaaaaaccg ttacgcacta ctgagccagc gtgtcatgga
     7621 cgccattgca gcattgcagt tggagtgagc acgtttgtgc acacaaaatc gacgtccata
     7681 ctgttggtat ttccaagttc gaataaccaa aattaatcgt agtctaattc tgccatgaaa
     7741 agaattttta tcgtgccgtt agctgtcttt ttggcggtat tctgttcctg tcaaaagcag
     7801 caaactgaag aagaacggaa tgctgagatt gagcggcggg tggagcaacg gttggcgtcg
     7861 gaacggcaag cgcagacgga acaagatctg gctcagcggc aggccgaact cgaggcgcgc
     7921 gagaaagctt tagctgaaca gcaacaagtc acggcgcatg cagcagcgac agtatccgcc
     7981 gaaactccgc tgcatgtcgc gaagcaaccg acagcttcct attcaacttt tcacagaaag
     8041 ctggagccat acggcgcctg gcgcgaaact tccaattacg gcttcgtatg gcaacccaac
     8101 gaagccgagc ggtcacggag ttggcggcct tacacgaacg ggcgctgggt ttataccgac
     8161 gcgggctgga catgggtatc cgaggagcct tttggctggg ccacctatca ttatggacgc
     8221 tggacgcgtc tgcgaaacat tggatgggta tggctgccag gagaagaatg ggcgccggcg
     8281 tgggtgtcgt ggcgcaaaag caatgattac atcggctggg cgcccctgcc tcccgaagcg
     8341 cgtttcgacc gccgcgcagg catccaaaat tgggctgaca gttattacga tatcggtcca
     8401 gagcaatact gcttcgttcc gaccaatgag tttggcgcgc gtcgcgttga gacggttctg
     8461 gttccaccca cgcgcaacgt gacgatcgtg gctcaaacga ccaacgtcac caacattacg
     8521 tacaacaatg tcacaatcgt aaatcaaggt cccagctacg atgaagtgcg cgcacgcgcg
     8581 cggcagccgg tggagcggtt gcgtctggag cgccagacct cgatcgatat cgaaacggat
     8641 accccgaagt cggttatcag aggagaagta atccagatgc ctgcgccggt aattgccaag
     8701 ggggagtcaa ttcagcggcc gcgcacagtg aaggagaccg tggcgcagcc aattgtcgag
     8761 cgcggctggg aaggaatcac cgatcagcaa gcggtgcgga aagcgcggga gaaaatcaaa
     8821 tccgaatcca cactgccggc gaatgctccc ccaaaaacat ttgcaaaacc ggcggaggca
     8881 gcgtccgctg aaacttcacc agcggtatcg cctcacacgt ttggttctcc aacgtcgccg
     8941 tcggcgttgg gatcatcacc gatcccagca gcgaccgcgc tgccggtggc gccggcgatg
     9001 ttaccccggt cggttggacc ctcgcgtcgc ccggtcgggt tcgcacccag cgcgacccct
     9061 ttccgccggg ccaaccctgt ttcacccgcc gcccctgtaa taacttcctc gccgacacca
     9121 gcaccagcgg ccagcctgac accagctgcg acacggccgc cgttcacgag aacagcgccg
     9181 gagatttccg cgagtccttc attgtcgccc ggcaactcag catccgtgtc gggttccccg
     9241 tcattcggtc gtccggccga aggcagagag ctgcgtcgtc ggcaaataga attgaagaaa
     9301 caacaacgcg ccacagagga aaagctaggg ccaagacatc tggacgcgtc tccgaatgaa
     9361 agcgccgcaa ccgcaacgcc ggggggctct aaggctttgg ccaccagttc gcccgccgaa
     9421 cctagggaga agccagaaaa gacgaaacac aaacgtgagc gacctgggga cagcgaaggc
     9481 atcgggattg tctcaccatc tccttcagtc gctccacaat gaacgcgagt gcttccatct
     9541 ttattcgcgt aattctcgcc ggtgtcggga aaatc
//
LOCUS       DATDAJ010000078         7622 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_491296, whole genome shotgun sequence.
ACCESSION   DATDAJ010000078 DATDAJ010000000
VERSION     DATDAJ010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7622
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491296"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..763
                     /gene="fabG"
                     /locus_tag="VIS53_01885"
     CDS             <1..763
                     /gene="fabG"
                     /locus_tag="VIS53_01885"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEY5766564.1"
                     /translation="IVMKDPLDFTGKVVLVTGSSRGIGAEMIQAFGTRGAQCVVNYVA
                     DAQGQNKADALGVAKELNEPLVIECDVTQPPQVEAMIKQIQDQRGWLDILVNNSGVIR
                     DRTIKKMSPDEFESVIRVNLIGTFTVTQKAAAILRNGGRVINMSSVSGQMGLFGQANY
                     SSSKAAIIALTKVSAREFARQNITVNAIAPGFIDVGMSKGMPEEVTLNFIKQIPLGRL
                     GEAHEIVDAALFLASPMASYITGHVLNVNGGFYVG"
     gene            complement(801..1013)
                     /locus_tag="VIS53_01890"
     CDS             complement(801..1013)
                     /locus_tag="VIS53_01890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766565.1"
                     /translation="MDLTLGCLKWAAVGFVVAFALMKLFEASHIHDDIPKPAFKIRQT
                     KRATFVLSIFAAVLSGLVWLLVQKLD"
     gene            1127..1585
                     /locus_tag="VIS53_01895"
     CDS             1127..1585
                     /locus_tag="VIS53_01895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766566.1"
                     /translation="MITKIYALIALVGFAGICISQAQSPSPAESPSPSQTPAKHRAMK
                     KAKATPAPATHPTPSPSPGKFNLGDLFKPKTSGAAASPAAAAPAPAKGTSAQAATKAP
                     APGGGHGKVWVNTETHVYHKEGSRFYGTTEKGKYMTEAEAMKAGNKAAQN"
     gene            complement(1582..1968)
                     /locus_tag="VIS53_01900"
     CDS             complement(1582..1968)
                     /locus_tag="VIS53_01900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766567.1"
                     /translation="MYAVELDLSKRLLVISAAQKVTAEEARMAAQRIREVLQDVAPGF
                     RVLADFRGLQSMDPAAARHIANIMDVLAEKGVASVTRVMPDPHKDIGLNILSQFHYGP
                     DVSITTFETLADAVQSIAAKADSSSS"
     gene            complement(2050..2898)
                     /locus_tag="VIS53_01905"
     CDS             complement(2050..2898)
                     /locus_tag="VIS53_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5766568.1"
                     /translation="MFSLIMLGSGSAGNSALVATEHCKILVDGGLSARQVVLRLEQCG
                     VTPEELDGVVLTHEHTDHICGLEVLCHKFDLPIYCNRLTAEALRSSDLSERCRNWRLF
                     ATGGEFSICDITVQTFPVPHDAVDPLGFVLHAGSGSLGFITDLGYVTKLITERLRQVQ
                     TLVVETNHDEKLLQNDTHRPWPVKQRIQSRHGHLSNAAAAGVIEELLPGKIERVVLGH
                     LSRDCNTPALALNTVRASLDKCGRNDVETYCAAQFEISPRFRIGDTEPGAFQSTFENV
                     FFQNAV"
     gene            complement(3006..3464)
                     /locus_tag="VIS53_01910"
     CDS             complement(3006..3464)
                     /locus_tag="VIS53_01910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766569.1"
                     /translation="MLPREVVVPISTVNRFFPEVMREASSGRNLTAVANAKATRSVIY
                     ANSDSSKKVTITVDEYPTASDASSAYEEAVAKSKTVPGFKPISAENLGQNAFVGTVTQ
                     GGETHIGLGALHGTLIVGATLAGYDPTPENTVRLISLTREEERAAKVAMD"
     gene            3771..4583
                     /locus_tag="VIS53_01915"
     CDS             3771..4583
                     /locus_tag="VIS53_01915"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEY5766570.1"
                     /translation="MPIGASLHIGLNAVDPKQYSGWDGQLTACEFDANDMQALAKTQG
                     FTKVIKRLTKRATRSRVLADIKAAAAKLKRNDIFFLTYSGHGGQVPNTGNDFEPDGYD
                     ETWCLYDGELIDDELYDALKQFVRGVRIFVLSDSCHSGTVLRAAHFSALGLTPVRPRM
                     MPRDIALRVYMDHEKFYDKLQQRSATRRKRMDATAFLISGCQDNQTSADGDRNGLFTE
                     TLLAVWKNGKFTGDYRGFHQSIVKLMPPTQSPNYFTIGRTNEQFEDQKPFTV"
     gene            4588..6411
                     /locus_tag="VIS53_01920"
     CDS             4588..6411
                     /locus_tag="VIS53_01920"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: protein motif:HMM:NF012862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HEY5766571.1"
                     /translation="MRILLVHGVGHQERPDNQPWERPWEEAITAGLQYFDPAFAPTYE
                     RFDYDNLFSGKINLFTDVGAAAHLGFAPVGAAVEDVAQTVSGWFRPRRGVLDWAKPVA
                     EAADGWHAGMVAEWDQNAPLRAALRKRLVERINAFKPDVIMAHSLGSVICYDAFSHED
                     KNACAGRFLVTFGSQIANPFLKAAHFDNKIGGVNQRYWFHLFNKSDPVLAHRIIDRVP
                     NFEEISWDDRVAGHDAVVDLDTLPGHAGYLQRDLTWQRVYRVLAQRPGVRALASRSAR
                     FQKTVQQRRRRALLVGINNYPDPASRLEGCVNDVFLMSSVLQEIGFDSEDIRVVLDER
                     ATAAAIRERIDWLLDGTADGQERVLYYSGHGAQLPDYNAAEQIDHVDECLVPYDFHWT
                     QDSAITDDDFLRYYSALPYAAKFFAIFDCCHSGGLTRDGARKIRAVTPPDDIRHRMLR
                     WNKAEQMWEERDLRNLNPDFGGNRDIREKYMGGNGSTKKLGTAMSLREKQTATQYWKA
                     PRERRGPYMPVVLTACEEGGYAYEYHHGTIGYGVFTYALAKEFRKAQAARETDVSFTE
                     LSERVNATMKTLRYDQISDVNGPKAGCRASVLGSPAKTRSR"
     gene            6586..>7622
                     /locus_tag="VIS53_01925"
     CDS             6586..>7622
                     /locus_tag="VIS53_01925"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY5766572.1"
                     /translation="MPLSRRNFLIRGSLSLAAGALSSVLVEAKTRENAPVDFKDWESV
                     RRQFELAPDSIHLALFFLASHPRPVRQAIEQYRAKLDANPLLTVEGAIFEQTDENIPL
                     RVCRALANYIGGEAQDIALTQNTTTGLALLYHGLPLREGDEILTTTHDHYVHHESIRL
                     ATGRCGATWRKIPLFDSYEAISSDEIAERIRKAIGPKTRAVGVTWVHSSSGVRLPIAR
                     IAETLADVNRSRDEKDRVLLIVDGVHGFGVEDPKITALGCDAFAAGTHKWLFGPRGTG
                     FVWAKPEVWKKMRPVIPSFSSSDLFAAWEEEHEPAPAARASWFSPGGFQAFEHFWALP
                     EAIRFHQNIGPA"
BASE COUNT         1701 a         2142 c         2184 g         1595 t
ORIGIN      
        1 aatcgtcatg aaggatcctc tcgatttcac cggcaaagtt gtgctggtta cgggcagttc
       61 gcgcgggatt ggcgcggaga tgattcaggc tttcggcaca cggggtgccc aatgcgtggt
      121 gaattatgtc gctgacgcgc agggacaaaa caaagccgat gctctgggtg tagcgaagga
      181 actgaatgaa ccgctggtga tcgagtgcga cgtgacgcag ccgccccagg tcgaagcgat
      241 gataaagcag atccaggatc agcgcggctg gctcgatatt ctggtaaaca attccggggt
      301 tatccgcgat cgcaccatca agaagatgtc tccggacgaa ttcgagagcg tcatccgcgt
      361 caatctcatc gggacgttta cagtcacaca gaaagcggca gcgattctgc gcaacggcgg
      421 acgagtgatc aacatgtcgt ccgtgagcgg acagatggga ttgttcggtc aggcgaatta
      481 ttcgtcgagc aaagcagcaa ttatcgcgct cacaaaagtt tcagcacgcg agtttgcgcg
      541 gcagaacata acggtgaacg ccattgcgcc tggattcatc gatgtaggaa tgagcaaagg
      601 catgcccgag gaagtgacgc tgaacttcat taaacaaatc ccgctcggcc gtcttggcga
      661 agcccacgag attgtcgatg ccgcgctgtt cctggcgtcg ccaatggcaa gttacatcac
      721 cggacacgtg ctcaacgtga acggcggatt ttacgtaggc taagcgagcc attgtccacc
      781 gtagccttgg cgaaggcgga tcagtccagc ttttgcacca gcaaccagac taaacctgaa
      841 agcaccgctg cgaatatcga taacacgaat gttgcgcgct tggtctgccg aattttgaat
      901 gctggcttgg gaatgtcgtc gtgaatatgg ctggcttcga acagtttcat cagggcaaaa
      961 gcgacgacga aacccaccgc agcccacttg aggcatccca gagttaggtc caccggcgag
     1021 agggtagcgc agacgaccgg cccgctcaag cccggtgctg aaattgcgct ccgagttcct
     1081 tcgaattgga ttgactgtaa tcccttcgcc ttcttacgct agctccatga ttacaaagat
     1141 ttatgctctg atcgctcttg ttggatttgc cggcatttgt atttcgcagg cgcagtcgcc
     1201 gagtccggcc gaatcgcctt ctccatcgca aacgcccgca aagcatcggg caatgaagaa
     1261 agccaaggcc acgcccgccc cggcgacgca cccaacccca tcaccctcac cggggaagtt
     1321 taatctgggc gatttgttca aaccgaagac ctctggcgca gcagccagtc ccgccgccgc
     1381 ggcgccagcc ccagcgaaag gcacgagcgc tcaggcagca acaaaagcgc ccgcgcctgg
     1441 cggaggccat ggcaaggttt gggttaacac cgaaacacac gtttaccaca aggaaggctc
     1501 gcgtttctac gggaccacgg aaaaaggcaa atacatgacc gaagccgagg cgatgaaggc
     1561 aggaaacaaa gctgcgcaga attaactcga cgaagaatcg gctttggctg cgatactttg
     1621 taccgcatcg gccaatgtct cgaaagtggt gatactgacg tccggtccgt aatggaattg
     1681 cgagagaatg ttgagaccaa tgtccttgtg cggatcgggc atgacccgcg tcaccgaggc
     1741 gacccctttt tcggcaagca catccataat attggcgatg tgccgcgctg ccgccggatc
     1801 cattgactgc agcccgcgga aatccgccag aacgcgaaag ccgggcgcga catcttgcaa
     1861 cacctcacgg atgcgttgcg cggccatcct tgcctcctcg gccgtgactt tttgcgcagc
     1921 gctgatcacc agcaggcgtt tcgacaggtc gagttcaacc gcgtacatgc ctcgtcatca
     1981 cacgaagcag gcgtagtcgc aagtgtgtca ctgtgcacaa gtgacatacc cgacagtcgg
     2041 cgacaaccgt tacaccgcgt tttggaagaa aacgttttcg aacgttgatt gaaacgcgcc
     2101 gggctcggtg tcgccgatgc gaaatcgggg actgatttcg aattgcgccg cgcaataagt
     2161 ttcgacatcg ttcctgccgc acttgtcgag cgatgcgcgc accgtgttca aagcgagcgc
     2221 cggcgtattg caatcgcggc tgagatgccc gagcacgacg cgctcgattt ttccgggtag
     2281 caattcctca atcactcccg ccgcagccgc gttcgacaga tgtccgtgcc gcgactggat
     2341 gcgctgtttc accggccacg gccgatgcgt gtcgttctgc aaaagttttt cgtcgtgatt
     2401 cgtctcgacc acgagcgttt gcacctgtcg caagcgttca gtaatcaatt tggtcacgta
     2461 accgagatcg gtgataaatc cgaggctgcc tgagccggcg tgaagcacaa acccaagcgg
     2521 atccactgcg tcgtgcggca cggggaaggt ttgcaccgtg atatcgcaga tcgaaaactc
     2581 accgccagtc gcaaacaatc gccagttccg acatcgctcc gagagatcgc tggaccgaag
     2641 cgcctcggcc gtgagtcgat tgcagtaaat cggcagatcg aatttgtggc agagaacttc
     2701 cagaccgcag atgtgatcag tgtgttcgtg cgtcagaaca acgccgtcga gctcctccgg
     2761 cgtgacgcca cattgctcaa ggcgcagcac gacttgccgc gcgctcagac cgccatcaac
     2821 gagaatcttg caatgctcgg tggcgacgag cgcgctattc ccggcgctcc cgctgccgag
     2881 catgatcaag ctgaacacgg gtcgcaagat agccgcgtga tttcatttcg cgcaaataga
     2941 aacagcgaga acgacaaacg atataggaaa aatatttgga gtcgcaccga ctatttctat
     3001 cggtttcagt ccatagcgac tttggcagcg cgttcttcct cgcgagtcag ggagatgagc
     3061 ctgactgtgt tctctggcgt gggatcgtac cctgccaggg ttgctcctac gattagcgtg
     3121 ccgtgtagcg caccaaggcc gatgtgcgtc tctcctccct gcgttacggt tccgacaaaa
     3181 gcgttttggc cgagattctc cgcggaaatt ggcttgaagc ccggaacagt cttgctcttg
     3241 gccacagctt cctcataggc cgacgacgca tcactcgctg tcgggtattc gtccacggtg
     3301 atcgtcactt tcttggagct atcgctattc gcgtagatga cgctccttgt cgctttggca
     3361 ttggcgactg cggtcaagtt gcgccccgaa ctggcttcgc gcatgacttc aggaaagaaa
     3421 cgattaaccg tgcttatcgg gacgactacc tcgcgaggga gcatggaacc ggacgccttc
     3481 gcagaaccgt tggcaggcga tggcgacgat tgtccgtctg cagtcagcga cagagattca
     3541 attacggcaa tgaatactgc cgcgaatttt gtcagccttg gcccggtccg catgtcgcta
     3601 atccttttac tccctccgct cgtacattga tgatttgcca gaaaatattc aacaccagat
     3661 agcgcgtgat tacggaacgg atcgtcgcag tgtggcagcg ataatcacct tgcacaggcg
     3721 gtgcgtcctg gttcagaatc ggcgtcctat tccaaaaacg aaagacactt atgccaatag
     3781 gagcctctct acacatcggt ctcaacgccg tcgatccaaa acaatatagc ggttgggatg
     3841 gacaactcac cgcgtgcgag ttcgacgcaa acgacatgca agcgttggcg aaaacccagg
     3901 gattcaccaa agtaatcaaa cgcctaacga aaagggcgac acgcagccgc gtcctggccg
     3961 atatcaaagc cgcagcggcg aaactaaaac ggaacgacat cttcttcctc acgtattcgg
     4021 ggcacggcgg gcaggtgccg aacaccggga acgattttga gccggacggt tacgatgaaa
     4081 cctggtgttt gtatgatggc gaactgatcg atgacgagct ttacgacgcg ctgaagcaat
     4141 tcgtcagggg tgtgcggatt tttgtgctat cggacagttg tcacagcggc acggtgcttc
     4201 gcgcagcgca cttctccgcg ctcggtctca cgcccgtgcg tccgcgtatg atgccgcgcg
     4261 atatcgcgct gcgcgtttac atggatcacg agaagttcta cgacaaactc caacaacgca
     4321 gcgcgactcg gcgcaaaaga atggacgcta ccgctttttt gatctccggt tgccaggata
     4381 accaaaccag cgcagacggc gatcgcaacg ggttgttcac cgaaacgctg cttgctgttt
     4441 ggaaaaatgg aaaattcacg ggcgactatc gcggcttcca ccaatcgatc gttaaactga
     4501 tgccgccgac gcaatcgccg aattatttca ccatcggacg gactaacgaa cagttcgagg
     4561 accagaaacc gttcacagtt tgatcggatg aggatcctgc tggttcacgg agtcggccac
     4621 caggagcgcc ctgacaatca gccctgggaa cgcccgtggg aagaagcgat caccgccggg
     4681 ctccaatatt tcgatcctgc atttgcgccg acctacgagc gcttcgatta cgataatctg
     4741 ttctcgggga agattaatct cttcaccgac gtaggcgcgg cggcgcatct cgggttcgcg
     4801 ccggtcggag cggccgtcga ggacgtggct cagaccgtct ccggctggtt tcgtccgagg
     4861 cgcggggtgt tagattgggc aaaacccgtg gctgaagcgg ccgatggctg gcacgcaggc
     4921 atggtggcgg agtgggacca gaacgcaccg ttgcgcgcgg cgttgcgcaa acgtttggta
     4981 gagcgaatca atgcgttcaa accggacgtg atcatggcgc acagtctcgg cagcgtcatt
     5041 tgctacgacg cattctcgca tgaggacaaa aatgcgtgcg ccggacgctt tttagtgacc
     5101 ttcggttcac aaatcgccaa cccgttcctt aaagccgccc atttcgacaa caagattggc
     5161 ggggtcaatc agagatattg gttccatctg tttaacaaaa gcgatccggt tctcgctcat
     5221 cgaatcatcg atcgtgttcc gaattttgag gaaatttcgt gggacgaccg cgtcgccggc
     5281 catgatgcgg ttgtcgattt ggatacgttg cctggtcacg ccggttatct ccagcgtgac
     5341 ttgacgtggc aacgcgttta tcgcgtgctc gcgcaacggc cgggcgtgcg cgccttggcc
     5401 agccgcagcg cgcgattcca gaaaaccgtg caacaacgcc ggcggcgcgc attgcttgtg
     5461 ggcattaaca attatcccga tcccgcgtcg cggctggaag gctgcgtgaa cgacgtgttt
     5521 ctcatgagca gcgtgttaca ggagatcggg tttgactctg aagatatccg agtcgtgctt
     5581 gacgagcgcg ccacggctgc ggcgattcgt gagcggatcg actggctgct tgatggcacc
     5641 gccgacggcc aggaacgcgt gctttattac agtggccatg gtgcacagtt gcccgactac
     5701 aacgcggctg agcaaatcga tcacgtcgat gaatgtctcg tgccgtacga ttttcattgg
     5761 acccaggaca gcgctattac cgacgacgat tttttgcgct actacagtgc gcttccttac
     5821 gccgcgaaat ttttcgccat ctttgattgc tgtcactccg gtggcttgac tcgggatggg
     5881 gcgcggaaga ttcgcgccgt cactcccccg gatgacatcc gacaccgaat gctgcgctgg
     5941 aataaagcgg aacaaatgtg ggaagagcgc gacctgcgga acctcaaccc cgatttcggt
     6001 ggcaaccgcg acatccgtga aaaatacatg gggggcaacg gcagcacgaa aaaattgggc
     6061 actgcaatga gtctccgtga gaagcaaact gcgacgcagt actggaaagc gcctcgcgaa
     6121 cggcgcggcc cgtacatgcc ggtggtgctg accgcctgtg aggagggcgg ctacgcgtat
     6181 gagtatcatc acggcacgat cgggtatggt gtgttcacct acgccctggc caaggaattt
     6241 cgcaaagcgc aggcggcccg tgagaccgat gtatcgttta ccgagctgag cgaacgcgtg
     6301 aacgcgacaa tgaaaacgct ccgctacgat caaatctctg atgtcaacgg gccgaaagcg
     6361 gggtgtcgcg cgtctgtgtt gggatcaccg gcaaaaacgc gctctcgtta ggctgaaaac
     6421 gcccggcgac tgtagccgcc tcgctgtgcg aggcgtacat ctcgcgtgtt aacagccccc
     6481 gtcccgcgcg tctcatagag acgcggctac agcgccttta taattggatc gctttcattg
     6541 caccaaccga tttacttaca ggcgtatcaa accgaggaca cccttatgcc attaagtcgc
     6601 cgcaattttc tcatccgtgg ttcgctgtcg ctggctgcgg gagcgctttc atcggttctc
     6661 gtcgaagcta aaaccaggga aaacgctcct gtcgatttca aagactggga atccgtgcgc
     6721 cggcagtttg aactggctcc tgattccatt catctcgcgt tgttttttct ggcttcccac
     6781 ccaagacctg tgcgtcaggc gatcgagcaa taccgggcga agttagatgc aaatccgttg
     6841 cttaccgttg agggcgcgat tttcgagcag actgacgaga acatcccgtt gcgggtttgt
     6901 cgggccctcg ccaactacat tggcggcgag gcgcaggaca tcgcgctgac gcaaaacacc
     6961 acgacaggtt tggctcttct ctaccatggg ctgccgttgc gcgaaggcga cgagatcctg
     7021 accactacgc acgatcacta tgtgcatcac gaatcaatcc ggctcgccac agggcgttgc
     7081 ggagcgacct ggcgcaaaat tccgctcttc gattcttacg aagcgatttc gtcggatgaa
     7141 atagccgaac gcattcgcaa agcgatcgga ccaaagacgc gagcggtcgg cgtcacctgg
     7201 gtgcactcca gcagcggcgt tcggttgccc atcgcacgga tcgctgagac tttggcggac
     7261 gtaaaccgca gccgcgacga aaaagatcgt gtgctgctaa tcgtcgatgg tgtgcacggt
     7321 tttggcgtgg aagatccaaa gatcacggcg ctgggctgcg acgcgtttgc ggccggcaca
     7381 cacaaatggt tgttcggtcc gcggggcacc ggcttcgttt gggcgaagcc agaagtttgg
     7441 aagaaaatgc gtccagtgat tccatcgttt agttcgtcgg acctttttgc cgcgtgggag
     7501 gaggaacatg agccggcgcc tgcggcaaga gcgtcatggt tttcaccggg cggtttccaa
     7561 gcgttcgaac atttttgggc gttaccggaa gcgattcgtt ttcaccaaaa catcggaccg
     7621 gc
//
LOCUS       DATDAJ010000079         3337 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_494506, whole genome shotgun sequence.
ACCESSION   DATDAJ010000079 DATDAJ010000000
VERSION     DATDAJ010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3337
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494506"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VIS53_01930"
     CDS             <1..331
                     /locus_tag="VIS53_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY5766573.1"
                     /translation="HLLKNVQPDFDVIVANLPYVSTEDRQNLSREVLHDPEVALFAGG
                     RGDELVRELIVQAPSWLRPGGMLAMEIGIGQSEALVAALLEKNYRDISTEKDYSGVIR
                     FLFARYG"
     gene            324..1586
                     /gene="murA"
                     /locus_tag="VIS53_01935"
     CDS             324..1586
                     /gene="murA"
                     /locus_tag="VIS53_01935"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEY5766574.1"
                     /translation="MDKILVHGGRRLSGSIKVSGSKNSSLPILAATLLTREPCIVHGV
                     PDLSDTNYMLQILAHLGAQVERASGTVTVTAGKIHSVAPYDVVRKMRASVCVLGPLLG
                     RCKEASVALPGGCVIGDRPIDLHLKGFEALGSAVRVEGGDIKVFAPKLGAAQIDMQGK
                     FGPTVLGTDNVMMAAVLADGTTIIEGAACEPEVVDLANFLNKMGAKIEGAGTDRIVIE
                     GVPELHGAEHRVIPDRIEAGTFLVAGAIAGDGVTVKRVEPEHVRAVTDSLAKCGYAVD
                     VAGDSISVLPNGQASALEIVTEPYPGFPTDMQAQMCALLSTNRGTSLITENIFPQRYM
                     HVAELKRMGAEVRLEGATAMIEGVESLFGAPVMASDLRASAALVLAGLKADGVTEVSR
                     VYHIDRGYEHLDEKLQELGAQIERVKAE"
     gene            1647..2018
                     /locus_tag="VIS53_01940"
     CDS             1647..2018
                     /locus_tag="VIS53_01940"
                     /inference="COORDINATES: protein motif:HMM:NF021221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEY5766575.1"
                     /translation="MDPQPSPTPSTSSDVRTWCVLCHASALLGLFFHFLGHILGPLAV
                     WLLKRGDSPEIDAHGKESLNFQISMLIYDAIAAILCIFLIGIPILIALWVLNTVLVII
                     ASVKASEGKFYQYPFTIRLIK"
     gene            complement(2038..2964)
                     /locus_tag="VIS53_01945"
     CDS             complement(2038..2964)
                     /locus_tag="VIS53_01945"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016888 - endodeoxyribonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEY5766576.1"
                     /translation="MFRSAQHDSNPARRQPNRSLITDHRSPLLIGAHMSIRGGVSMAI
                     ERARSIRCTAMQIFVKNNMQWFARPLTREEIRAFLNHVQRGELLSVFGHANYLINLAA
                     TNPLFHANSIRALAEELVRADQLKLPFLVLHPGAHLGAGEEAGLKKIADSVDEVFRKI
                     PKVKTKIALEITAGQGSCIGHRFEHLAHIIANVREPERLRVCLDTAHLFAAGYEIGSG
                     SGARKTFQEFDRVIGRNRLVAIHVNDSKTVRGSRVDRHEHIGKGRIGLDAFRFIMRSP
                     RLRKIPKVLETPKGNDLAEDVINLKTLRRLAR"
     gene            complement(3031..>3337)
                     /locus_tag="VIS53_01950"
     CDS             complement(3031..>3337)
                     /locus_tag="VIS53_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766577.1"
                     /translation="FGPLSGILNHIVPGSGYSIAHKANAEFTVGNGIIRTEDFEAGGS
                     LFSMLGNGDIHFLDDKLDFNLRLDMKGPGIVLMPMYKLFEYAGEGSLKKPDWHPKRF"
BASE COUNT          717 a          873 c          947 g          800 t
ORIGIN      
        1 ccacttgctt aaaaatgtgc aaccagactt cgatgtgatc gtcgcgaatc ttccgtatgt
       61 ttcgaccgaa gaccggcaga atctttctcg cgaagtgttg cacgatcccg aagtggcgct
      121 tttcgcaggg ggccgtgggg acgagctggt gcgggaatta attgtgcagg cgccgtcgtg
      181 gcttcgtccg gggggaatgc tggcgatgga gatcgggatc ggccaaagcg aggcgcttgt
      241 cgcagcgctg ttggagaaaa attatcgcga catttcgacg gaaaaggatt actcgggtgt
      301 gatacgtttc ttgttcgcga ggtatggata aaattcttgt tcacggcggc cgccggcttt
      361 ccggttctat taaggtcagc ggttcaaaaa actcctcgct accgatcctc gcggcgacat
      421 tgctgacgcg ggagccatgt atcgttcacg gcgttcccga cctgagcgat acgaattaca
      481 tgctccaaat tcttgctcac ctcggtgcgc aagtggaacg cgcgagcggc accgtgactg
      541 taactgccgg gaagatccac tctgttgcgc cctacgatgt cgtccggaaa atgcgcgcgt
      601 ccgtttgtgt tttgggacca ttgctgggta ggtgcaagga agccagcgtc gcgttacccg
      661 gcggctgtgt cattggcgat cggccaattg atctgcatct gaaaggcttt gaagccctcg
      721 gttctgcggt gcgtgtggaa ggcggcgata tcaaggtttt tgcacctaaa ctgggtgcgg
      781 cccaaatcga catgcaagga aaattcggtc cgaccgtgct tggtacagac aacgtgatga
      841 tggcagctgt cttagccgac ggaactacta tcatcgaagg agcagcatgc gaacccgagg
      901 tcgtggacct ggcaaatttc ctcaacaaaa tgggcgcaaa gatcgaaggc gctggcacgg
      961 accgaatcgt cattgagggc gtccctgagt tgcacggcgc tgaacaccgc gtgatcccgg
     1021 accgaattga agccggcacg tttctggtag caggtgcaat tgccggagat ggagtgacgg
     1081 taaaacgcgt tgagccggag cacgtacgtg cggtcactga ttcgctcgca aagtgcggtt
     1141 atgcggtgga tgtcgcaggc gattccattt ccgtcctgcc aaacggccaa gccagcgcgt
     1201 tggaaatagt cacggaaccg tatcctggtt tccccaccga catgcaggcg caaatgtgtg
     1261 cgttactttc gacgaacaga ggaacgagct taattaccga aaacattttt ccgcagcgtt
     1321 atatgcacgt ggctgagtta aaacgcatgg gagccgaggt ccgattggaa ggcgccactg
     1381 caatgatcga aggagtggag agtcttttcg gcgcgccggt gatggcaagt gatctgcgcg
     1441 cgtctgctgc gctggtgtta gccggactga aagcagacgg cgtcacggaa gtcagccgcg
     1501 tgtatcacat cgaccgcggc tacgaacatc tcgacgaaaa actccaggaa ctcggcgcgc
     1561 aaatcgagcg ggtgaaggca gagtagcgca tatctttttc tgcctcttct actggcgagc
     1621 agccagtcct tgagcgaagg ttgcatatgg atccacaacc gtcgccgact ccatccactt
     1681 cctctgatgt tcgaacctgg tgcgttttgt gccacgccag cgcgttgctc ggattgtttt
     1741 ttcactttct gggtcatatt ctcggcccgc ttgctgtctg gctgttaaaa cgcggcgact
     1801 cgcctgaaat cgacgcgcac ggaaaggaat cgttgaattt tcagatctcg atgctgattt
     1861 acgacgcgat tgccgcgatt ctctgcatct tcctgatcgg gattccgatc ttgatagcgc
     1921 tctgggtgtt gaacaccgta ctggtgatca tcgcatcggt taaggccagc gaaggaaagt
     1981 tttatcagta tccgtttacg atccggctga tcaagtgacg gcgttgctag cgctgcttca
     2041 ccgggccaat ctacgcaacg tttttagatt tatcacgtcc tccgcgaggt cgtttccttt
     2101 tggcgtttcc agcactttcg ggattttgcg caaacgtggg cttcgcatga tgaaacggaa
     2161 agcgtccaga ccgatccggc ctttgccaat atgctcgtgt cgatctactc gcgaaccgcg
     2221 aactgttttg gaatcgttta cgtgaatcgc aacgagacga ttgcgaccga taacgcgatc
     2281 gaattcttga aatgttttcc tcgctcctga tccgctgccg atctcgtaac ccgctgcgaa
     2341 cagatgcgcg gtgtcgaggc acacgcgcaa acgctccggt tcccgcacgt tcgcgatgat
     2401 gtgcgcgaga tgctcgaacc gatggccaat gcacgaacct tgcccggctg taatctcgag
     2461 cgcgattttc gttttcactt ttggaatctt ccgaaacacc tcgtccactg aatcagcgat
     2521 ttttttcaaa cctgcttctt cacccgcgcc gaggtgcgca cccgggtgca gcaccaaaaa
     2581 cggaagttta agttgatctg cccggaccag ttcttcggcg agggcccgga tggaattcgc
     2641 gtgaaatagc ggattcgtcg ccgcgaggtt gatcaagtaa ttggcgtgcc cgaacactga
     2701 caacaattca ccacgctgga cgtgattaag aaaagcgcga atttcctcgc gggtcagcgg
     2761 tctggcgaac cactgcatgt tgtttttcac gaatatttgc atcgcggtgc agcggatcga
     2821 tcgcgcgcgt tcaatggcca tgctcacccc tccgcggatg gacatgtgcg cgccaattaa
     2881 cagcggtgat cgatgatccg taatcagtga tcggttcggc tgccgccgcg ccgggttact
     2941 gtcatgttga gcggagcgaa acatctctga ctctttctca aaaacggatg atctgagatt
     3001 cttcgcttcg ctcagaatga caagagcggc ctaaaatctt ttagggtgcc aatcgggttt
     3061 cttgagactc ccttcgccgg catattcgaa aagtttatac attggcatga gcacgatgcc
     3121 gggtcctttc atgtccagcc ggagattgaa gtcgagtttg tcatcgagaa aatgaatgtc
     3181 tccgttgccg agcatactga agagagagcc accggcctcg aaatcctcgg tacgtataat
     3241 gccgttcccg acggtgaatt ctgcgtttgc tttgtgggct atgctgtatc cgctgccggg
     3301 cacgatgtga tttaaaattc ctgacagcgg cccaaaa
//
LOCUS       DATDAJ010000080         2179 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_505063, whole genome shotgun sequence.
ACCESSION   DATDAJ010000080 DATDAJ010000000
VERSION     DATDAJ010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505063"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(280..723)
                     /locus_tag="VIS53_01955"
     CDS             complement(280..723)
                     /locus_tag="VIS53_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766578.1"
                     /translation="MENRERHLSTADIAASSEQPEVQPGRIDSDVHRKQEDVIALGDT
                     KAEQTGRNNLKNDQSAPLFSNDSIHGFRSRWNALQTGFVDEPRRSVEQADELVAEVIK
                     DLASTFTDERTKLERQWDQGDKVSTEDLRLVLRRYRSFFDRFLSI"
     gene            complement(684..1244)
                     /locus_tag="VIS53_01960"
     CDS             complement(684..1244)
                     /locus_tag="VIS53_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766579.1"
                     /translation="MDTQMWILIVAVLVGIIILLGGLLFMQRHRSRHLQKRFGPEYDR
                     TLRKYGDQKDAEAELLAREQRVTKLHIVPLSAADAARFTEAWRSVQNRFVDDPRAAVQ
                     EADRQVLELMQRRGYPTGDSAHVIILADQGQRASTEDLRKAIVHYRAIFDELLDTRKS
                     EPEIHQTEKKGGWQWKTGRDIFRRPI"
     gene            complement(1697..>2179)
                     /locus_tag="VIS53_01965"
     CDS             complement(1697..>2179)
                     /locus_tag="VIS53_01965"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY5766580.1"
                     /translation="WCLGGALTVTAGCDIAIASEEALFGLPEVNFGHFPAGETTAVLT
                     EHLQPKHGLYYALTGKMMSAKDAERIGLISKAVPRAELDKEVAELAKCLAEKSPMALK
                     AVKEAWYYSWYSPPDVAFELSNLISQRTIREHGGRPGLEQFVQKKLRPVSGVMNLQKE
                     "
BASE COUNT          515 a          619 c          552 g          493 t
ORIGIN      
        1 cgagtaagaa tgaggcggcg acgacaagca ccaacaaaac gagtattgcg ccgccgatcg
       61 acaacagcga ttttttgagc acgggtctca tgagctaaac cgctgggtgc gtctcactct
      121 ccgccccccg gcgcgttaaa gatggtcagc tcaaagacgg caaaatccgt tcaaagcatt
      181 tgttcggcct caaacttggt tgagagattc ataagccgtc ccaagcgaag cttttcgcta
      241 caggcaactt tcgcgggccg acacaccccg tgccgttggc tagatcgaaa gaaaccggtc
      301 aaaaaacgac cgataacgac gcaacactaa acgcaagtct tcagtagaaa ctttatctcc
      361 ctgatcccat tggcgttcca attttgtccg ctcatcggta aaagtcgatg ccaaatcctt
      421 tattacctcg gcgaccagct catccgcctg ctcgacggat cgtcgcggct catcgacgaa
      481 gccagtctgc aaagcgttcc aacgagagcg aaaaccgtga atcgaatcat tagaaaacaa
      541 tggcgcggac tggtcgtttt tcagattgtt ccgtcccgtc tgctccgcct ttgtatctcc
      601 gagcgcaatc acatcttctt gctttcgatg tacgtccgaa tcgattctgc cgggttgcac
      661 ttccggctgt tccgaagacg ccgctatatc ggccgtcgaa agatgtctct ccctgttttc
      721 cattgccaac ctcccttttt ttcagtctgg tgaatctctg gctctgattt tcgcgtatcg
      781 agcaattcgt cgaaaatcgc ccggtaatga acaattgcct tccttagatc ctccgtgctc
      841 gctcgctgtc cctgatcggc gagaatgatc acgtgcgccg agtcgccggt cggataaccg
      901 cgccgttgca ttaattcaag cacttggcga tcagcttcct ggacggccgc tcggggatcg
      961 tcgacgaaac ggttttgcac cgaacgccag gcttccgtaa atcgggctgc gtccgccgcg
     1021 gaaagcggaa cgatgtgcag tttggtgacc cgctgctcac gcgctaatag ctctgcctcg
     1081 gcatcttttt gatccccata cttgcgtaaa gtccggtcat actccgggcc gaagcgcttt
     1141 tgtagatgtc gcgagcggtg tctctgcata aaaagcaatc cgccgagcag aataataatg
     1201 ccgacgagaa cagccacaat gaggatccac atttgagtgt ccataacgtt tctccatttt
     1261 ttggcgacta tgtgagcagg ccgccggatt gaataatcac gcgcgaggtt cgagtaacgt
     1321 tcacgcaaat gtctcgtcag caaagcacat gccacgaacg aacaacaaaa tgatcgcagc
     1381 gaaattgccg tatcagcgct tgcgatgcct cgaaatatgt aagagatttc gatacaattg
     1441 gaggaaaaaa agagaagaat accgacgcga aacgggacga tcgaagtttg cgcagctaca
     1501 ggacgcgagc gccagaacga ctacgctcgg cggttgattt taatctgcgc gcgatgttcg
     1561 ctcgagaaaa tcaagctgac ggggctacac ccggcctggt tcgcatggcg cggcgccgtt
     1621 tccaagcggc cgtagcgttg atagcaacgc aatagctatc taagaacaaa atcaccgaaa
     1681 aaaatcgcgg cgccgctcac tctttttgca aattcatgac gcccgacacg ggtcgaagtt
     1741 ttttctgaac gaactgctcc aggcccggcc gtccgccgtg ttcgcgaatt gtgcgctggg
     1801 aaatcaaatt ggaaagctcg aatgcgacat ccggcggcga ataccagcta tagtaccacg
     1861 cttctttcac cgccttcagt gccatcggac ttttctcggc gaggcattta gccagctccg
     1921 ccacttcctt gtctaactcc gcgcgtggca cggccttcga gatcaaaccg atgcgctcgg
     1981 cgtccttcgc ggacatcatt tttcctgtga gcgcatagta aagaccgtgt tttggctgaa
     2041 gatgttcggt caacacggca gtggtttcgc cggcgggaaa gtgaccgaag ttgacttccg
     2101 gcaaaccgaa gagcgcttcc tccgaagcga tggcgatgtc gcatccggcg gtcaccgtca
     2161 atgctccgcc gagacacca
//
LOCUS       DATDAJ010000081         4927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_510743, whole genome shotgun sequence.
ACCESSION   DATDAJ010000081 DATDAJ010000000
VERSION     DATDAJ010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4927
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510743"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..611)
                     /locus_tag="VIS53_01970"
     CDS             complement(126..611)
                     /locus_tag="VIS53_01970"
                     /inference="COORDINATES: protein motif:HMM:NF020858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766581.1"
                     /translation="MALQSFIEIAPDSHFSLENLPFGVFQPRQGKPRVGVAIGDLIVD
                     LSALEKLHHFRSPEFQNQKVFSEDSLNSFLKLGRRAWRKTREILQHLLSADTPILRDD
                     ARLRKIFHAQKDVTMKLPVRRDQESNLQSQHLHAVSLVAVGKRRREDSPMESVNPVKL
                     Q"
     gene            complement(692..1609)
                     /locus_tag="VIS53_01975"
     CDS             complement(692..1609)
                     /locus_tag="VIS53_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766582.1"
                     /translation="MATSASLRALLDQAIDYAGMFPPCDLPLEPALQNQASYVRSPEA
                     WILNGFVLPVGQFNAATKFVSQFDPSHPLRVAALGPKTANADTFLAALVNAATAIRSF
                     SRSDVDLVSVSHLEMFLPDDVDSASLKEASAIVGELPVFWEALPERAEQTIALIAGNN
                     SDENTARFGYKLRTGGVTADAFPTSAQIARALVTAATHQLPIKFTAGLHHPIRQFRDE
                     VKTKMHGFLNVLGAAVLSAEHQWDADQAVTMLEDDDAHSFSFTDDFFAWRDWKIDTER
                     LQYRRKFVRSFGSCSFDEPRDDLRTLGFL"
     gene            complement(1756..2703)
                     /locus_tag="VIS53_01980"
     CDS             complement(1756..2703)
                     /locus_tag="VIS53_01980"
                     /inference="COORDINATES: protein motif:HMM:NF013431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766583.1"
                     /translation="MKFSHTEEDRDGRHLDLLTDEENGVRIIVSRLGAELISMARINE
                     AGEWIGFLYRDNDVTAPPNGWANHATVMGYYLHRLKNGSSLYRGHEIKGGTHGFLRAK
                     TWHLAGSFINESGASLKYRMTPDDFSQIEYPLKVSVDLIYQVGANGVGVLFEFRNHEP
                     ELTAHVSFGLHPGFGADSFESFHLQMPRGLYRRYFSPGNYLSGETREVEFRGGEMPFP
                     RDELPGSVILELADVPRRVFTYVDPPSGRWVTLDLTGVPYVTLWSDGGPFLCVEPCWG
                     LTDHHEQRAFEKKQGIQTIPPGGELRASLTMTPQFASCD"
     gene            complement(2811..4106)
                     /locus_tag="VIS53_01985"
     CDS             complement(2811..4106)
                     /locus_tag="VIS53_01985"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEY5766584.1"
                     /translation="MDDESCADAAVHTIYDDEVFQMACEQFRVIADYLNIDQSDREWA
                     TYPKRAIAVTLPVHMDDGSTQAFQGYRVQHHIALGPTKGGTRFAPSLSMGETAALAMW
                     MSWKCALAQLPYGGAKGGVAVDPSKLSRKELEAVSRRYMQEMIPFVGPHTDIMGPDMG
                     TNEQIMAWFMDTYSVYKGYAVNEIVTGKPVAIGGTEGRREATGRGAVYLVERAMNMLK
                     MDPEKCTAIIQGFGNVGSVAALSLAYKSGVKVVGISDHTAAIYNPKGIDVKAAEQHMI
                     KKGNLRAFAQDDHVNPNQFLTLPCDILIPAAVDRVITAKNADQLKCRILAEGANGPTT
                     PEADLILDQRRDEVFVIPDILCNAGGVIVSYFEWVQGLQAFLWSESEVTDKLFRILEH
                     SFVQVIRRAKEHRVSHRTAAMATGVERVIKAKQARGLFP"
     gene            4468..>4927
                     /locus_tag="VIS53_01990"
     CDS             4468..>4927
                     /locus_tag="VIS53_01990"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEY5766585.1"
                     /translation="MKIETVAVHAGHEVDPATGAVAPPIYLSTTFERDIEGTYSRGFM
                     YSRNDNPNRKTLERGVSMLEGGEAAAAFASGTGATMSIFQALSPGDHVLAHIDAYYGT
                     SRLIREIFVRWGLEADFVDMSDLAAVRKALRPNTKLAWAETPSNPLLKVVD"
BASE COUNT         1115 a         1405 c         1325 g         1082 t
ORIGIN      
        1 agaggccggg cgtaattcac tttcaccaat ctgcgaaaat ctgcgcaatc tgcggataac
       61 tttgcccgcg gcttggcgtt gctgggctct tcgtggttaa atcttaagca tggctcttcg
      121 ctcgttcatt gaagtttcac cggattcaca ctttccattg gagaatcttc ccttcggcgt
      181 tttccaaccg cgacaaggga aaccgcgtgt aggtgttgcg attggagatt tgattcttga
      241 tctctccgca ctggaagttt catcgtcaca tccttttgcg cgtgaaatat ttttcgcagt
      301 cgagcgtcat cccgcagtat tggagtatcc gccgacagca ggtgctgaag gatttcgcgc
      361 gtttttcgcc acgcgcgtcg acccagcttg agaaatgaat tcagcgaatc ctcagagaat
      421 accttttggt tctgaaattc cggcgatcga aaatgatgga gcttttccaa cgcggataga
      481 tcaacaatca aatctccaat cgcaacgccc acacgcggtt tgccttgtcg cggttggaaa
      541 acgccgaatg gaagattctc caatgaaaaa tgagaatccg gtgcgatctc gatgaatgat
      601 tggagcgcca taaacggtag agcgattgac ctcaatcgcc cgacatgtgt ttgtttagca
      661 caccgggcgg ttcaggtgaa ccgcccctac cttacaggaa accgagtgtg cgcaaatcgt
      721 cgcgcggctc atcgaagctg caactgccga aagacctcac gaatttgcgg cggtattgca
      781 ggcgttccgt atcgattttc cagtcgcgcc acgcgaagaa atcgtcggta aacgaaaacg
      841 agtgtgcatc gtcgtcctcg agcatcgtta cggcttgatc ggcgtcccat tgatgctccg
      901 ccgaaaggac cgcagctccg agcacattca aaaatccgtg catcttcgtc ttcacttcgt
      961 cgcgaaattg ccggattgga tgatgcagcc cagccgtaaa cttgattggg agctgatgcg
     1021 tcgctgcggt taccagcgcg cgcgcgatct gcgccgaagt cggaaatgca tcagccgtca
     1081 ctccgccggt tcgcaatttg taaccgaatc ttgccgtgtt ctcgtcggag ttgtttccgg
     1141 caatcaatgc aatggtttgc tctgctctct ccggcagcgc ttcccaaaac accggcagtt
     1201 cacccacaat cgcgctcgcc tctttgagag aagcagaatc cacatcatcc ggtaaaaaca
     1261 tttcaagatg actgaccgag acgagatcga catcggatct cgagaatgaa cgaatcgctg
     1321 tggctgcgtt cacgagggcg gcgagaaagg tatccgcatt tgcggtcttc ggccctagcg
     1381 cggcgacgcg gagcggatgc gaagggtcga actgtgaaac aaatttcgtt gcggcgttga
     1441 attgtccgac cggcagaaca aaaccattca gtatccaggc ttcgggcgaa cgcacatagc
     1501 tcgcctggtt ctgcaacgct ggttcgagcg gcaggtcaca cggcgggaac atgcccgcgt
     1561 aatcaattgc ttggtcgagc agggcgcgaa gtgaagcgga agtagccata acgccggaaa
     1621 gctaaccacg aatgcaaacg aggaaaatcg tgtagccacg cccctgtggg gcgtgcaggt
     1681 ttgagtttct tattcaacga cgacggcgcg cagcgccgtg gttacagcaa gatcgtaaag
     1741 tgataacgcg gccagctaat cgcacgaagc aaattgcgga gtcattgtaa gcgaggcccg
     1801 caattcgcca ccgggcggaa tggtttggat cccttgtttt ttctcgaatg cgcgctgctc
     1861 gtgatgatcg gtcaatcccc agcacggctc gacgcagaga aacggcccac cgtccgacca
     1921 cagggtgacg tatggcacac ctgtcaggtc cagagtcacc catcgaccgc ttggtggatc
     1981 gacataggtg aaaactcgtc gcggcacatc cgctagttcg agaatcaccg aaccgggtaa
     2041 ctcgtctctt ggaaatggca tttcgccacc gcgaaattca acctcgcgcg tttcgccgga
     2101 taagtaattg cccggcgaaa aatatcgtcg atacaatccg cgcggcattt gcaggtgaaa
     2161 gctttcgaat gaatccgcac cgaagcctgg atgcaatccg aacgacacgt gcgcggtcaa
     2221 ttccggttca tggttccgaa actcgaaaag cacgcctacg ccgttagcgc caacctgata
     2281 aatgagatcg acactcacct tcagtggata ttcgatttgt gaaaaatcat ccggtgtcat
     2341 tcggtatttc agcgaagcgc cgctctcgtt gataaaagat ccggcgagat gccatgtttt
     2401 cgcgcgaaga aaaccgtggg tgcccccctt gatttcgtgg ccacgataca gactgctgcc
     2461 attcttcagt cgatgaaggt aataacccat gaccgtggcg tgatttgccc agccgttagg
     2521 cggcgccgtc acatcattgt cccggtaaag aaagccaatc cactcgccgg cttcattgat
     2581 tcgcgccatg ctgatcagtt ccgcaccgag acgcgacaca atgatccgaa cgccgttctc
     2641 ttcatcagtg agaagatcca gatgccgacc gtcacggtct tcctctgtat gcgagaactt
     2701 catcgtagcc gtgcgtgcaa ttgtaggacg tttatgtgaa acgccgatgt gatcgcgtct
     2761 gacacagacg ccctacagta gtttcgaacg gtcgcagatc ttcgcgccgc tcatgggaac
     2821 aagccgcgcg cttgtttggc cttaatgacg cgctcaacgc cagtcgccat cgcggctgtg
     2881 cgatgcgaca ccctgtgctc cttcgcgcgt ctgattactt gcacaaacga atgctcgaga
     2941 atgcggaaaa gtttgtcggt cacttctgac tccgaccata aaaaggcctg cagaccttgc
     3001 acccactcga agtatgaaac gatcacgccg cctgcattgc agagaatgtc cgggatcacg
     3061 aagacttcgt cccggcgctg gtctaaaatc agatccgcct cgggcgtggt cgggccgttg
     3121 gcgccttcgg caaggatgcg gcacttgagt tgatcggcat tttttgcggt aatcacgcga
     3181 tcaaccgccg ccggaataag aatatcgcac ggcagcgtga gaaactggtt aggatttaca
     3241 tgatcgtcct gagcgaacgc acgcagattc cctttcttaa tcatgtgttg ctcggccgct
     3301 ttaacgtcga tgccttttgg attgtaaatc gctgcggtgt gatcgctgat cccgacgact
     3361 ttgacgccgc tcttataggc cagcgacaaa gctgcgactg aaccgacgtt gccgaatcct
     3421 tgaatgatcg cggtgcattt ttccggatcc atcttcagca tgttcatggc gcgctcgacg
     3481 agatagacgg caccgcgacc agtcgcttca cgccggcctt cggtcccgcc aatagcgacc
     3541 ggcttgccgg taacgatttc attcaccgca taacccttgt aaacggaata ggtatccatg
     3601 aaccacgcca tgatctgttc attcgtgccc atgtccggac ccatgatgtc ggtatgcggg
     3661 cccacgaatg gaatcatctc ctgcatgtaa cgacgcgaga ccgcttcgag ctccttacga
     3721 gataatttgc tgggatcgac cgccacgccc cctttcgcgc cgccgtaagg caactgcgcc
     3781 agcgcgcatt tccaactcat ccacatcgcc agcgcggccg tctcgcccat cgataatgac
     3841 ggcgcgaaac gcgtgccgcc cttggtcgga ccgagcgcga tgtgatgttg aacgcggtaa
     3901 ccctgaaaag cttgggtgct accgtcgtcc atgtgcaccg gcaatgtcac ggcgatcgcc
     3961 cgcttcggat acgtcgccca ttcgcggtcg ctctggtcga tgttcagata atcggcgatg
     4021 acgcgaaact gctcgcaagc catctggaaa acttcgtcgt cgtaaatcgt gtgaaccgct
     4081 gcatctgcgc aactctcgtc gtccatggga agctgctatt tgcgctgagc acgaggcgtc
     4141 gtcaactggg aaacttgtga cattcgcagg tctggggagc acacgcgtca cgcgtgctgg
     4201 cgagcgcgtc tcgcgctcgc gaactttttc aagcgcacac gcacattgtt taatcgcagc
     4261 ttcagaaaag atcgtttcgg cgcgccgccg ctgcagtgga tgcgaagccg cgtaaacgac
     4321 atgatttccg ccacccaaag gatggcttat acgcagcgaa gtaacgccca ggctttcaac
     4381 gagcacgcga gccggtgcgc tatcttgacc gcgcacgcta cactccaaag atcgacaaga
     4441 gcgcgtgaac ctggctaatg tccgcaaatg aaaatcgaaa ctgtagccgt tcacgcagga
     4501 cacgaggtgg atccggcaac cggagcggtg gcccccccga tttatctgtc cactacgttc
     4561 gagcgcgaca tcgagggcac gtactcacgt gggttcatgt actcgcgcaa cgacaatcca
     4621 aatcggaaaa cgcttgaacg cggcgtgagc atgctcgaag gcggcgaagc ggccgcagcc
     4681 ttcgcctctg gaaccggcgc aaccatgtcg atttttcagg cgttatcgcc cggcgatcac
     4741 gtcctcgcgc acatcgacgc gtactacggt acgtcccgac tgatccgcga aatttttgtg
     4801 cgctggggac tggaggcaga tttcgtggac atgagcgacc tcgctgccgt gaggaaagcg
     4861 ctgcgaccaa atacaaagct ggcttgggcc gaaacaccgt ccaatccgct gctaaaagtt
     4921 gtcgatc
//
LOCUS       DATDAJ010000082         4524 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_512761, whole genome shotgun sequence.
ACCESSION   DATDAJ010000082 DATDAJ010000000
VERSION     DATDAJ010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4524
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512761"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..480
                     /locus_tag="VIS53_01995"
     CDS             169..480
                     /locus_tag="VIS53_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766586.1"
                     /translation="MKIVCSLILALAAACCVAAEPTWNPADAVKEAEQDIRSGHIKFY
                     WAGSIASRPVGVPIEVARKYPQANAGIGCVTNDIPLRERQEEYARRYNEKIYAYITQK
                     H"
     gene            complement(632..1099)
                     /locus_tag="VIS53_02000"
     CDS             complement(632..1099)
                     /locus_tag="VIS53_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766587.1"
                     /translation="MIKTRIAVMAIVMSFATTVACFAANAQMGTWKLNEAKSKIAPGM
                     GKNTTVVYAEQGDKIKITVEGVDKDGKPTHAVWIGKWDGKAYPAKGNLAWDSAAYKVI
                     NDHSNEITTMKNGKVVWTGKITVAADGKSRTATVNGTDANGKQFHSKAVYDKA"
     gene            1118..2188
                     /locus_tag="VIS53_02005"
     CDS             1118..2188
                     /locus_tag="VIS53_02005"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY5766588.1"
                     /translation="MPLDVNAKLEMRAVRLVQVGKPLEESDIPIPEIGSTDILIRVAA
                     AGICHSDVHYRENISKIDRLPLILGHEVAGRVEEVGSDVTHLSAGDRVCVHYLVHCGS
                     CEFCVRGLEQFCRSGQMIGKHRDGGYAEFIKVPGANAFPLPDEIPFEAGAIMMCSSAT
                     ALHALNKARFKAGESIAIFGFGGLGFSALQLARAFDCRNVYVIEINPAKLASAASMGA
                     TAIDAKSADPVEQLKEATAGTGVDVALELIGSAKTMRQAVLCLRPLGRAALVGLTAES
                     MSVHPYTELINKEAEIIGVSDHLATELPALIEFARSGKLRFPPETLRVVGLDAAQIDA
                     ALDALQDSIDHVRTVIVPSSDQ"
     gene            complement(2303..3457)
                     /locus_tag="VIS53_02010"
     CDS             complement(2303..3457)
                     /locus_tag="VIS53_02010"
                     /inference="COORDINATES: protein motif:HMM:NF012407.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEY5766589.1"
                     /translation="MARYRVAWMPGDGVGNDVMEATRIVLDRMNFDAEYVPCDIGWEF
                     WCKEGNALPDRTVKALKDTTCALFGAITSKPQDKAKEELSPELKGKGLSYFSPIVGLR
                     QLFNLHTNMRPCKSYPGNPLNYRGNKITNPSGEDVPIDQVVFRENTEGMYGGVEFFPL
                     PESVYTALCANPKMKKWKDKAGLENIALSTRIMSVQGCTNICKQAFDYAKKTGLKRVT
                     LIEKPNVLRETGGLMTHCFRDVAKSYPDIWADEVNIDAICMWMFKNPQDYSVLVAENM
                     FGDIVSDLCAGLVGGLGFAPSANLGDKYAVFEPTHGSAPKYSGQYKVNPIAMLLTAKL
                     MFDWLNETERATRLESAIARVIAEGKVRTYDMGGKDSTLDVAKAIADYAS"
     gene            complement(3645..>4524)
                     /locus_tag="VIS53_02015"
     CDS             complement(3645..>4524)
                     /locus_tag="VIS53_02015"
                     /inference="COORDINATES: protein motif:HMM:NF012897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HEY5766590.1"
                     /translation="QSNGDWQTLVEAGAIPLPPGCGACIGLGRGLVEKGETAISATNR
                     NFKGRMGDRDSFVYLASPAVVAASALAGFICAPTDFIEKAAGTTTRRPERKQKPATSV
                     HIMEGFPASVRGRILFIDKDNLNTDGIYGSKHTYRDDMTPEAMAAVTFENYDPNFNTL
                     YQKGDVVVGGLNFGSGSSREQAATALKFKGIPCVIAGSFSETYKRNAFNNGFVVFECP
                     ELVTHLRDTLTDRAPTTVGPEITINYAKSILTVDGKSFPFPPLSPAAQELIVVGGAEK
                     LVASRLRGRNTGIVPV"
BASE COUNT          952 a         1253 c         1239 g         1080 t
ORIGIN      
        1 acttatcaat cgtcatacga tcagttagtc gaagattcat gtctgtatgg atgatctggc
       61 gaggttgagg accttcgcaa agcgtcatgg cgaggtgtgg tgcaggaaca agaccgcacg
      121 gtaaaaaaac tagcgttcgg cgagggtagc tgatcctata tcacgtttat gaaaatcgtg
      181 tgcagtctaa tattggcgct cgctgctgcg tgttgcgttg cggcggaacc gacttggaat
      241 ccggccgatg cggtgaagga agctgagcag gacattcggt caggacacat caagttctat
      301 tgggcgggta gcattgcgtc gaggccagtg ggagttccga tcgaagtagc caggaaatat
      361 ccccaagcca acgctggaat cggctgcgtc accaacgata taccccttcg agaacgacag
      421 gaagaatatg cccgccggta caacgagaaa atttacgcct acatcaccca gaagcattag
      481 aagccatttt cgactgtcat tctgagcaca gcgacgaatg gagcaatcgg ggcgagcaac
      541 atggactgcc aagccgcgct acaacgattg cccgtaaaat ccgcgcatgt cgttgtcgcg
      601 gatcgtcgct gccgcgagag taatcaaacc gttacgcttt gtcgtaaacg gctttggagt
      661 ggaactgttt cccgttcgca tccgtgccgt tgaccgtggc cgtgcgggat ttgccgtctg
      721 ctgcgacagt gattttccct gtccaaacga cctttccgtt cttcatcgtg gtaatttcat
      781 tggagtgatc gtttatcact ttgtaggcgg cggagtccca ggcgagattt cccttcgccg
      841 ggtaggcttt tccatcccat ttgccgatcc agacggcgtg cgtcggtttc ccatccttgt
      901 ccacaccctc cactgttatc ttgattttat ccccctgctc cgcgtaaacg accgtcgtgt
      961 tctttcccat ccccggcgcg atctttgact tagcttcatt gagcttccat gtgcccatct
     1021 gcgcattcgc cgcaaaacag gctactgtcg tcgcaaacga catgactata gccatcactg
     1081 caattcgagt ttttatcatc tgcggattgc gccggaaatg ccgttggatg tcaacgccaa
     1141 actggaaatg agagcggtgc gactcgtgca ggtcggaaaa ccgctcgagg aatcggacat
     1201 tccaattccc gagatcggat cgacggacat tttgattcgc gttgcggctg ccggcatctg
     1261 tcactcggat gtgcattatc gagagaacat ttccaaaatt gatcgtttac cgctgattct
     1321 tgggcacgaa gtcgcgggtc gcgtggagga agtcggcagc gatgtgacgc acctttcagc
     1381 tggagaccgc gtttgcgtac attatttggt ccactgcgga agctgcgagt tttgtgtgcg
     1441 cggcttggaa caattctgtc gcagcggaca gatgattggc aaacatcggg acggcggtta
     1501 cgcggaattc atcaaagttc ccggcgcgaa tgcgtttccg cttcccgacg agattccgtt
     1561 cgaagccggc gcaattatga tgtgctcgtc ggcaactgcg ctacatgctc tgaacaaggc
     1621 gcgcttcaaa gccggcgagt cgattgcgat ttttggcttc ggcggactcg gattctccgc
     1681 attgcaattg gcacgcgctt tcgattgcag aaatgtctac gtgattgaaa tcaatcctgc
     1741 gaagctcgcg tcagccgcca gtatgggagc tacggcgatc gacgccaagt cggcagatcc
     1801 ggttgagcag ctcaaagagg caaccgctgg aacaggagtc gatgtcgcac tcgaattgat
     1861 cggctccgca aaaacgatgc gccaggccgt gctttgcctg cgccctctcg gacgcgccgc
     1921 tcttgtcgga ttaaccgccg aatcgatgtc ggtccatccg tacactgagt tgatcaacaa
     1981 agaagcggag atcatcggcg tctccgatca tcttgcgact gaacttccag cactcatcga
     2041 attcgcgcgc agcggaaaac ttcgatttcc accagagacg ttgcgtgtcg tcggcctcga
     2101 cgccgcccaa atcgatgcag cactagacgc acttcaggat tccattgatc acgtcagaac
     2161 agtaattgtc ccaagtagtg accagtgacc agtgacactt gttttaccca gcgtaatcgg
     2221 cgacggcttc gcgatatcaa gcgtcgaagc gttgctgccc tcgccacggc gagtccgacc
     2281 aatggcggac atgtcgttaa tgctaactgg cgtagtccgc gatcgcttta gcgacatcaa
     2341 gcgttgagtc cttgccaccc atgtcgtagg tgcgcacttt gccttcagcg atcacgcgcg
     2401 cgattgcgga ctcaagacgc gttgcgcgct cggtttcgtt gagccagtcg aacatcagct
     2461 tcgctgttaa gagcatggcg atgggattga ccttgtattg gcctgagtat ttcggcgcag
     2521 aaccgtgagt cggttcgaac acggcgtatt tgtcgccgag gtttgcgctc ggcgcgaagc
     2581 cgagtccgcc gacgaggccg gcgcacaaat cgctgacaat gtcgccaaac atgttttcag
     2641 ctacgagcac cgagtaatcc tgcggattct tgaacatcca catgcagatc gcgtcgatgt
     2701 ttacttcgtc ggcccagatg tccgggtaac tctttgccac atcgcggaag cagtgtgtca
     2761 ttaatccacc ggtctcgcgc agcacattcg gtttctcgat tagcgtgacg cgtttgagcc
     2821 cggttttctt ggcgtaatcg aatgcctgtt tgcagatgtt ggtgcagcct tgcacactca
     2881 tgatgcgagt ggaaagcgcg atgttttcca atccagcctt gtccttccac ttcttcattt
     2941 tcggatttgc acacagcgcg gtgtaaaccg actcgggtaa tgggaaaaac tccacgccgc
     3001 cgtacatccc ttcggtgttt tctcgaaaca cgacttgatc gatcggcacg tcttcaccgc
     3061 tcggattcgt gattttgtta ccgcggtaat tcagcgggtt gcccggataa ctcttacacg
     3121 ggcgcatgtt agtgtggaga ttgaaaagct gacgcagtcc cacgataggc gaaaaatagg
     3181 agagtccttt gcctttgagt tccggactca gctcttcctt tgctttgtct tgtggcttgc
     3241 tggtgatggc gccgaatagc gcgcaggtcg tgtccttgag cgccttcacc gtgcgatcgg
     3301 gaagcgcgtt accttccttg caccaaaatt cccacccgat gtcgcacggc acgtactccg
     3361 catcaaagtt catccgatcg agaacgatgc gcgttgcttc catcacatcg ttgcccacgc
     3421 cgtcgcccgg catccacgca actctatatc tagccatagg cggtcgactt tatcgccaag
     3481 cgtcccccct gcaagctagc cctgtggttt ttggaggcga ccagggatta cacagatgtc
     3541 acagagcggc gaagccgcag gaaaagtaat tcaggcttcc agcctgaccg gtcgaccaag
     3601 cttcccagct tggtgatcat gagcaagcaa ggatgcttgc tcgactagac aggcacgatg
     3661 cctgtgttac gaccacgcag cctggacgcc acgagctttt cggccccgcc cacaacaatc
     3721 aattcctgcg cagcgggact gagcggtggg aagggaaatg attttccgtc aacagtgagg
     3781 attgatttcg cgtagttgat cgtgatttcc ggtccaaccg tcgtcggagc acgatcagtc
     3841 aacgtatcgc gcaagtgcgt gaccagctct gggcattcga acacgacgaa gccgttattg
     3901 aatgcgttgc gcttgtaggt ttcggaaaaa ctgccggcga tgacacacgg gattcctttg
     3961 aactttagcg cggtcgcagc ctgttcgcgg ctcgagccgc ttccaaaatt gagtccgccc
     4021 acgacgacgt cccccttttg ataaagcgtg ttgaagttgg gatcgtaatt ttcaaacgtc
     4081 actgccgcca tcgcctccgg cgtcatatcg tcgcggtaag tgtgtttgct cccgtaaatg
     4141 ccgtccgtgt tcaagttgtc tttgtcgatg aacaagatcc ggccgcgcac gctcgcagga
     4201 aaaccttcca tgatgtgcac cgatgttgct ggcttctgct ttcgttcggg tcgtcgagtg
     4261 gtggtgccgg ctgccttttc gataaagtca gtgggcgcgc aaatgaatcc cgccaatgcg
     4321 ctggcggcta cgacagcagg cgaagccaga tagacgaacg aatcgcgatc gcccatgcgg
     4381 cctttgaaat tgcgattggt cgcgctgatt gccgtctcgc ccttttcgac gaggccgcga
     4441 ccgagtccga tgcacgcgcc gcagcccggc ggtagcggaa ttgctccggc ctccacgaga
     4501 gtttgccaat cgccatttga ttgc
//
LOCUS       DATDAJ010000083         4543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_513213, whole genome shotgun sequence.
ACCESSION   DATDAJ010000083 DATDAJ010000000
VERSION     DATDAJ010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4543
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513213"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(302..841)
                     /locus_tag="VIS53_02020"
     CDS             complement(302..841)
                     /locus_tag="VIS53_02020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766591.1"
                     /translation="MNLFERAMVLGAVLLAGCGTTRNVAVSSYHVTRDVAVGSYRVAT
                     APVHYALRRHNEPTMVGTTDAIESDVTQPGHAAASTQVASAPQPRRKADTARSQKLPK
                     TTPSVAHNDTTQSEPKPSPPAQASSTSTAFPTAKAVPDKAGYVFSPFDSSGRYVDVSG
                     YTSGTKVKDPWTDKIFVVP"
     gene            complement(879..1919)
                     /locus_tag="VIS53_02025"
     CDS             complement(879..1919)
                     /locus_tag="VIS53_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HEY5766592.1"
                     /translation="MRADTIHHQFASDNTAGICPEAWKALEQANAHYAPSYGEDEWTA
                     AVCERIRQLFELDCDVYFVFTGTGANALGLAQVCQSFHGVICHERAHIQTDECGATEF
                     YTRGAKLFLTKTKDGKIDLGETEKLIAQQVELHGHMMRAISIAQATELGTVYTTDEVE
                     AIGAFARAHRMLLHMDGARFANAVASLGCAPKTITWKAGVDVISFGGTKNGVAAGELV
                     IFFDKTASCDFQYRVKQAGHLGSKMRFLAAQWLGLLKGDVWLRNARHANEAARQLAQR
                     LGNEAGVENVFPVESNAVFVQLSDQVVQGLHARGWRFYKIVEPDIYRLMCSWSTTDEE
                     ISTLVGDFVAIK"
     gene            2169..>4543
                     /locus_tag="VIS53_02030"
     CDS             2169..>4543
                     /locus_tag="VIS53_02030"
                     /inference="COORDINATES: protein motif:HMM:NF013761.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HEY5766593.1"
                     /translation="MRSLQSDVEQRGTRIFELVDKHPERLFSKTGFYQRLMALSMHDE
                     RFKTQLFRFVAVLPSLRRSSEIIQHLEEYFSGGNGFSPLVGMGVRVARLVPWISAPVL
                     RWNVSEMARQFIAGRNPHEVIATLRKRRAQKIGFTVDVLGEAVVSEAEAEEYAAIYGD
                     LLEKLARETRDWTDPLEKTAELFPVVNLSVKISALYSQISPAAPADAIAHLSTKLRPL
                     LRRARELGAFVNFDMESYALKNTTLELFKTILTEAEFKDWPHAGIVIQAYLRDSEGDL
                     RDLIEWGRGRGTRFAVRLVKGAYWDYETTKSGQNGSNPPVFLQKPESDANFEKVTRVL
                     FENNSVVTPAFGSHNVRSIAHAQAVADELGIDRSRFEFQLLYGMAGPIKCALVEMGYR
                     VREYCPIGELLPGMAYLVRRLLENTSNEGFLRAKFAENVPAKELLRDPRELTTPAVAG
                     TGLSGEASAKAGDSGGTSQSKQKNDASLNATAGHSFRNAPLVSFIYKDSQEKMQGALR
                     EARKRLGEKYPLYIGGEKIWSDDLTPSVNPAEPTEIVGYGTEAGIDEAERAVKAARAA
                     FEKWRWTPVEERAQLLERAADIMERRRYELSAVEVFEVGKPWSEADGDIREAIDFCRF
                     YAQQMRRLGRPKLTQQVPGEESYHHYWPRGVAFVIAPWNFPIAILCGMASAGVVTGNA
                     VIMKPSEQSIVCGAMLMQVFEEAGVPPGVLNFLSGHGSVIGAHLVDHKDVDLIAFTGS
                     REVGLKIWESAGITRPGQRELKRVICEMGGKNAMLVDADADLDETIMYSIYS"
BASE COUNT         1001 a         1251 c         1277 g         1014 t
ORIGIN      
        1 agcagcaagc cgacagtaaa cgacttgcct ggcacaatcg cggttgtatc ggctaaaagc
       61 tctgccctaa cgagctcctt tccctgatag gtctgggcaa ggccgtgtgg agcaacagca
      121 acgagcagcc agcaaagcag cgaataaacg gacgatctcg acgcaattcg cataagatta
      181 ggtaacattc gctgcactcg acggcaattt agtcaactgt agccgcttcg ctgtgcgaag
      241 cgtgacgtcg gtctccgtat tcactccggt cgcgtcgccc acagggcgac ggctacagga
      301 tctagggcac gacaaagatc ttgtcagtcc agggatcttt aactttggtc cccgacgtgt
      361 aaccgctcac atcaacgtat ctgccactcg aatcaaatgg actaaacacg tatcccgcct
      421 tgtcgggcac cgccttggca gttgggaacg ccgtggacgt cgacgaggct tgcgccggtg
      481 gcgatggttt tggttcggat tgcgtggtgt cgttatgagc gacagacgga gttgttttgg
      541 gcagtttctg agatcttgcc gtatcagcct ttcgccgtgg ctgcggcgcc gaggccacct
      601 gcgttgatgc agcagcgtgc ccgggctgag tcacatcgga ttcgattgca tctgtcgttc
      661 cgaccatggt tggttcgtta tgccgccgga gagcgtaatg caccggcgcg gtcgcaacac
      721 gataagaacc gactgccacg tcgcgcgtca catggtatga actcacagcc acgttgcgcg
      781 tggttccgca tccggcgagt aaaaccgccc ctaacaccat agctcgttca aataggttca
      841 tctcgtttgt aagatcgttg ccaccgcaat ctgttcaatc atttaatcgc gacaaaatcg
      901 cccaccagcg ttgaaatctc ctcgtcggtg gtggaccacg aacacatcag acggtaaatg
      961 tccggctcca caattttata aaatcgccag ccgcgcgcgt gcaggccctg tacgacttga
     1021 tcgctcagtt ggacgaacac cgcattcgat tccacgggga atacgttttc cactcctgcc
     1081 tcatttccaa ggcgctgcgc aagctgtcgc gccgcctcat tcgcgtgccg cgcgtttcgt
     1141 aaccagacat ctcctttcaa cagccccagc cactgcgcag cgagaaagcg catttttgag
     1201 ccgaggtgcc cagcttgttt cacccgatat tgaaaatcac acgaagctgt cttgtcgaaa
     1261 aaaatgacca gctcgcccgc cgcaacgcca ttttttgtcc cgccgaagct gattacatct
     1321 acgcctgctt tccaagtgat cgttttcggt gcacacccaa gcgatgcgac ggcattggca
     1381 aagcgcgcgc cgtccatatg aagcaacatt ctgtgcgccc gcgcaaaggc gccaatcgcc
     1441 tcaacttcat ccgttgtgta aaccgttccc agctccgtcg cctgtgcgat gctaatggcg
     1501 cgcatcatat gcccgtgcag ctcgacctgt tgcgcgatga gtttttctgt ctcgcccagg
     1561 tcgatctttc catctttggt tttcgtcaaa aacagtttgg ctccccgcgt ataaaactcc
     1621 gtagcgccgc attcatccgt ctggatatgg gcgcgctcgt gacaaatgac cccgtggaag
     1681 gattggcaaa cttgtgccag accgagcgcg ttcgccccgg taccggtgaa tacaaagtaa
     1741 acatcgcaat cgagttcgaa taattgccgg atgcgttcgc acaccgccgc ggtccattcg
     1801 tcctcgccgt aagaaggagc ataatgcgcg ttcgcctgct ccaaagcttt ccacgcttcg
     1861 ggacaaatgc ccgccgtgtt gtcactggca aactggtgat gaatcgtgtc ggcgcgcatc
     1921 gggcctctat tacgcgagtt ttgccgcctg acaatcaaca caagagattg cctgacagcg
     1981 gagccctggg cctccgaagc tgccaggcaa atcccttctc tattttgctc ctcgaattgc
     2041 gttcagcagt tcatttatat ttcggagagc gcaggccgag tgaccgtgtt tcctagtcaa
     2101 tttttgcact tgatcatcgc ttttcgttgc attttgccta actcgcggca gcagactaac
     2161 cttcgccaat gagatcgctc cagagcgacg tcgagcagcg cgggacgcgt attttcgagc
     2221 tggtcgacaa acatccggag cgacttttca gcaagaccgg attttatcag cgcctaatgg
     2281 cgctctcgat gcatgacgag cgattcaaga cacaattgtt tcgctttgtc gccgtactgc
     2341 cgtcgctccg acgatcaagc gagattattc agcatctcga agaatatttc agcggtggta
     2401 atggtttctc cccgctcgtt ggcatggggg tccgtgtggc gcgcctcgtc ccgtggataa
     2461 gcgctcccgt cctacggtgg aatgtttccg aaatggctcg ccagtttatt gccggacgaa
     2521 atccgcatga agtcatagcg acgttgcgca aacggcgggc acaaaaaatc ggcttcaccg
     2581 tagatgttct gggcgaagct gttgtgagcg aagcggaggc ggaggaatat gcggcgattt
     2641 acggagattt actggagaaa ctggcgcgtg aaacaagaga ctggacggac ccgctcgaaa
     2701 aaaccgcgga gcttttcccg gttgtaaatc tgtcggtcaa aatctctgcc ctctattcgc
     2761 aaataagtcc ggccgctccg gcggatgcga tcgctcatct cagcacgaaa ctccgaccgc
     2821 ttcttcgccg cgcgcgcgag cttggcgcat ttgtcaattt cgacatggag agttacgcgc
     2881 tcaaaaatac gactctcgag ctgttcaaaa ccattttgac cgaggcagag ttcaaagatt
     2941 ggccgcatgc cgggattgtc atccaagcct atttgcgaga ttcagagggt gacctgcgcg
     3001 atttgatcga gtggggtcgc ggacgcggca ctcgcttcgc agtccgactg gtgaaaggcg
     3061 catattggga ttacgagaca acgaaatcgg gccagaacgg gtcgaatcct ccggtctttc
     3121 ttcaaaagcc cgagagcgac gcgaatttcg aaaaagttac gcgcgtgctt tttgaaaata
     3181 actcggttgt gacgcccgcg tttgggtcgc ataacgtccg cagcattgcg cacgcgcaag
     3241 cggtcgccga tgagctcggc attgatcgca gccggttcga gttccagctg ctttacggca
     3301 tggccgggcc catcaagtgc gcgctggtgg agatggggta tcgcgtccgg gaatattgtc
     3361 cgatcggcga gttgctgccc ggcatggcct atctggttcg gcgcctgctc gagaacacgt
     3421 cgaacgaggg gtttttgcgg gcaaaatttg ccgagaacgt gccggcgaaa gaattgctgc
     3481 gcgatccaag agaactcacc acgcccgctg tagctggaac tggcttgtcc ggcgaagcct
     3541 cggcgaaggc gggtgattcc ggtgggacca gtcaatcgaa acaaaaaaat gacgcttcac
     3601 ttaacgcaac agctggccat agtttccgaa acgcaccgct tgtgagtttc atttacaaag
     3661 acagccagga gaaaatgcaa ggcgcgttgc gcgaagcgcg aaagcgcttg ggcgaaaagt
     3721 acccgctata catcggaggg gaaaaaattt ggtccgatga tttgacgcct tcggtcaatc
     3781 cagccgagcc gaccgagatt gtcggttacg gaaccgaagc cgggatcgac gaagcagagc
     3841 gtgccgttaa agctgcgcgt gctgcattcg aaaaatggag atggacgccg gtcgaggagc
     3901 gggcgcagtt gctggagcgt gcggccgata tcatggagcg caggcgctac gaactctcgg
     3961 cagtagaagt tttcgaagtc ggcaagccat ggtctgaagc cgacggcgat atccgcgaag
     4021 cgatcgattt ctgcaggttt tacgcgcagc aaatgcggcg actgggacgc cccaaactca
     4081 cgcaacaagt gccgggcgaa gaaagttatc accattactg gccgcgcggc gtggccttcg
     4141 taatcgcgcc gtggaatttt ccgattgcga ttctctgcgg gatggcgtcg gcgggagttg
     4201 ttactggaaa cgccgtgatt atgaaaccat ccgagcaatc gatcgtctgc ggcgccatgc
     4261 tcatgcaggt ctttgaggaa gcaggtgttc cgcccggcgt gctcaatttt ttgtcggggc
     4321 acgggtcagt gatcggagcg catttggtcg atcacaaaga cgtcgatttg atcgcgttca
     4381 ccggttcgcg tgaagtcgga ttgaagattt gggaatcggc cggaatcacc cgacctggtc
     4441 agcgcgaact gaagcgggtg atttgtgaga tgggcggcaa aaacgcgatg ctcgttgatg
     4501 cagacgcaga tctcgacgaa acgatcatgt attcaattta ttc
//
LOCUS       DATDAJ010000084         4567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_513392, whole genome shotgun sequence.
ACCESSION   DATDAJ010000084 DATDAJ010000000
VERSION     DATDAJ010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513392"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /locus_tag="VIS53_02035"
     CDS             complement(<1..809)
                     /locus_tag="VIS53_02035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766594.1"
                     /translation="MRIFRNLAILFAFGVASAAAGPAEVILQPSPKPADENSHNLFNY
                     ETTYTFQSDFEESKLGHGDSLYDDFSYDHRFLITGKVYFRAGIEYERYDFGGSNNGLP
                     DHLQGLYGHLALEYVVKDYPGAAIELDPGFYFQDQIGEKNFDVPGKVYVSFPLKKDKI
                     FATVGFGWGQFQDPIVAPGGGITWLINDKLRLQAVFPKPALVYQPNDDWDIRAIGELG
                     FLGARTDDVVTTERKLQVHDAVVQYSEYRAGLQVRYSGLKPFKLIVGAGCT"
     gene            1033..1689
                     /locus_tag="VIS53_02040"
     CDS             1033..1689
                     /locus_tag="VIS53_02040"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY5766595.1"
                     /translation="MINAVFSIEPPTALLGLANPLQSADQGIATWFHDRLTPAFGSVL
                     HALTEFGSGKSIGIMVFVLVLFFVWKRWWPSLVTLLIAVPCGMLLNEWLKFAVHRERP
                     FVEGAFVDWTGYSFASGHTIGATLLYGQILLFVLPALKGRHLRLLCIFSAAALVLLVG
                     FTRIALGAHFLTDVLAAMFFGIVWLMLCTLLGKSVRRRTVALATSAQPAQNCPVKIGG
                     "
     gene            1792..2802
                     /locus_tag="VIS53_02045"
     CDS             1792..2802
                     /locus_tag="VIS53_02045"
                     /inference="COORDINATES: protein motif:HMM:TIGR03476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase-like domain-containing protein"
                     /protein_id="HEY5766596.1"
                     /translation="MKSGKRIRIVFYLLVAAGAALFTFLLIHQGAPQVMAAFASAGWW
                     IAAVVIYHLVVPVLLDALAWWSLFPRSERLSLWELFWMRWIGESVSTLVPSASVGGDV
                     VRARLAALRGASISAAAASVLVDITLGVFVQIVFTLLGLALIVTATGHQSFVRPTLIG
                     AVIGVLAIIGFYVVQRLGMFRFIGKMISRVANADDWHSLVHSGHTLDEAIRTQYARRS
                     GVVGCCAWTAASLILGSGEIWIALYALGLHATFVNAVILQSMVLTIRSLVFPVPGALG
                     VQEGGYVIVGNLLGIPGDAAFALSLIARVRELLLGIPGLVAWQVIEARRVLRARSAAN
                     VR"
     gene            complement(3778..>4567)
                     /locus_tag="VIS53_02050"
     CDS             complement(3778..>4567)
                     /locus_tag="VIS53_02050"
                     /inference="COORDINATES: protein motif:HMM:NF001911.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEY5766597.1"
                     /translation="LARPKVFDLVISMDTQLTWYGQSAFKIVTPSGKVLLVDPWLSNP
                     VLENAKAEIAALKHVDLILITHGHSDHVGDAVDIGKKTGAKLVATFDLADAMVKHLGY
                     PADQAETDTVGHFGGELTLLDSEVKVAFVRAHHGSGVAADERHGLRHGGAPGGFVITI
                     RGGPTIYHTGDTDLFSDMALLTLFHDIDVMLVCIGDHFTMGPSRAAEAAKLVKARTVI
                     PMHYGTFPILTGTPEAFGRELKEREAEAELRVMKVGETVSLGGA"
BASE COUNT          926 a         1263 c         1221 g         1157 t
ORIGIN      
        1 attgtacagc ctgcgcccac aatcagctta aacggtttga gaccagaata tcgtacctgc
       61 aaaccggcgc gatattcgct gtattgaacc acagcatcat gcacttgtaa tttccgctcg
      121 gttgtcacta cgtcgtcagt ccgggcgcca agaaagccaa gttcgcctat tgctcgtatg
      181 tcccagtcgt cgtttggctg atacaccagc gctggttttg gaaagacagc ttgcaaacgc
      241 aatttgtcgt taataagcca ggtgatacca ccgccggggg cgacaattgg atcctggaac
      301 tggccccagc cgaaaccgac cgtggcgaaa atcttgtctt tttttagcgg aaagctcaca
      361 tacactttgc cggggacatc gaaattcttt tcgccgatct gatcttggaa ataaaatcca
      421 ggatccagtt cgatcgctgc ccctgggtag tccttcacaa cgtactccag cgccagatgt
      481 ccatacagtc cctgcagatg atcaggcagt ccgttgttgc tcccgccaaa atcgtaacgc
      541 tcgtattcga tgccggcccg aaagtacact ttgcctgtga ttaaaaatcg gtggtcgtaa
      601 ctaaaatcgt cgtaaagcga atccccatga ccaagtttgg attcctcaaa atcgctctgg
      661 aacgtgtacg tcgtctcgta gttaaagaga ttgtgtgaat tttcgtccgc cggcttgggg
      721 gaaggctgaa gaataacttc cgccggcccc gctgcagccg acgcaactcc aaaggcaaac
      781 agtatcgcta ggtttcgaaa tattctcaca ggctaaagcg atctggacat cgacatatcg
      841 gatggagaag gtgaacccga tgtatcgaag ggaaaccatt ttggcaagga atatttcgat
      901 tgaggctcct aggcggaagt cgcacccgcg aaatggccgt agccaatcgc gaccctttac
      961 ccgccaccgc gattggcctc aatccatcgt ttgactcgca cttaattcgc cgtagacttc
     1021 gtccgttttt ctgtgataaa cgccgttttt tccatcgaac ctcccacggc actgctgggt
     1081 ttagcgaatc ctcttcagag cgctgatcag ggaatcgcca catggtttca cgaccggctt
     1141 actcccgcat tcgggagcgt gctgcacgcg ttgactgagt tcggttcggg caaatcgata
     1201 ggaatcatgg tgtttgtgct ggtactgttt ttcgtgtgga agcgatggtg gccatctctc
     1261 gtgacgctgc taatcgccgt gccctgtggg atgcttttga acgagtggtt aaagtttgct
     1321 gtgcatcggg agcgtccctt tgtcgaaggc gcgttcgtgg actggactgg ttacagtttt
     1381 gccagtggcc acaccatcgg ggctactttg ttgtacggcc agattctcct ttttgtgctg
     1441 ccagcgctca aggggcgcca tttacgcttg ctctgcattt tcagcgcggc ggcactggtt
     1501 ctcctggtgg gattcacccg catcgccctc ggtgcacatt ttttgactga tgtgctcgcg
     1561 gcaatgtttt tcgggattgt ttggcttatg ttgtgcacgc ttctcggaaa gtctgttcga
     1621 cgaaggactg ttgcgttagc gacttcagcc cagcctgcgc agaattgccc agttaaaatt
     1681 ggcgggtagt cgttccgcct gccgttagca agttggcaac cgcagcggtt gccctacaat
     1741 tcacaattcg tcgctgcacc cgcgtcagct cgcaggcgcg aactgtatcg catgaaaagt
     1801 ggaaaaagaa tccgaattgt gttttacctg ctcgtcgccg ccggcgccgc gctattcacg
     1861 ttcctgctta tccaccaggg tgcgccgcag gttatggcgg cgttcgcctc tgccggctgg
     1921 tggattgctg cggtcgtaat ttatcacctt gtggtcccgg tgttgctgga cgcgcttgca
     1981 tggtggtcac tctttccgcg atccgagcgt ctttcgcttt gggaactgtt ttggatgcgc
     2041 tggattggcg aatcggttag cacgctggtg ccatctgcta gcgttggtgg tgacgtcgtt
     2101 cgggcgcggc ttgctgcgct acgcggcgcc tcgatctcgg cggcggcagc gagcgttctc
     2161 gtggacatta ctctgggagt tttcgtccag attgttttta cactcttagg attggcgttg
     2221 attgttaccg cgacgggaca ccagagcttt gtccgcccaa cactgatcgg agcagtgatc
     2281 ggagttctcg cgatcatcgg gttttatgtc gtccaacggc tgggaatgtt tcgctttatc
     2341 ggcaagatga tttcccgcgt ggcgaatgca gacgattggc attcactggt gcacagcgga
     2401 cacactcttg acgaggcgat tcgaacacag tatgcgcggc gatcaggtgt agtcggatgc
     2461 tgcgcctgga cggccgcgtc actgatactc ggctccggcg aaatctggat agctctttac
     2521 gcgctcggat tgcacgcgac gttcgtcaat gccgtcatcc ttcaaagcat ggttttgacg
     2581 atccgttcgc tcgtgtttcc cgtgccgggc gcactcggag tgcaggaggg cggctatgtc
     2641 atcgttggca atttgctcgg tattcctggt gacgctgctt tcgcactctc tttgattgcg
     2701 cgggtgcgcg aattgcttct cggaatcccg ggcctggttg cgtggcaggt gattgaagcc
     2761 cgccgcgtct tgcgcgcccg ctcggccgcg aacgtgcggt aatattccag atcaaccacc
     2821 acgcctgcga gcttttggag acgccgtttt accttcgcgg gatttgtgaa acttgttcga
     2881 acgccccacc aaatccatgc catgcctgtt ggcactgcca gttgatcctt caattgcgca
     2941 atgaccggcg cattgtcgta cgcattgagg aacgccaata ccagagcaag ccattgccga
     3001 ttcggcgcta acgccagtaa atccaaaagg aaaactagta ggtcatctgc gtgccgcgat
     3061 ttcgtgggca acgatttgtc gtggacaatt tcaaaatcaa tcagtcgcgc gcggccagtc
     3121 ttctcgtcat agagcacgtt gttcgtgcct gtatccccat gcgaccacgg gccgcggaac
     3181 tcatcgctcc ataactgatg cgctcgccgg agttccttac cggctgcttc catcatttct
     3241 cgtgtgagtg tgccctcttt caaatggtcc gagagactcc tgcctggcag tttgtcggcg
     3301 cagattgtgt tcgcgccgga agcgcgtgca tgaaaccgat cgccgttcaa catgttgaag
     3361 gattccactt cccaccgccg ccagtctccg attttcgccc agaaacgaat cggtatcccg
     3421 gccatgcgaa agtacacatt cgccagctct gctaacggct cgctgtatac ggtgcgccgc
     3481 ttaatcatga gccgccgacc acgccgcacc tgctcggaga ccgaattgac ctttaacgaa
     3541 tcgaccagtc tgtctgcggc attcctgaga gtcttcggaa tgcgtcgcct aaagggctct
     3601 ttttccgagg agaccggttg cgctgaggtc atgatagttg ttaagcccga cattttgatt
     3661 cgattcggtg cgatgtttta gcgcgaccgt atgaacggac cgctgatcga aacacctcga
     3721 aacggtaatt gtgacggata aaacgattta gaggttgttg cggcgtctta agttttttta
     3781 agctccgccc agcgaaaccg tctcgccgac tttcattacc cgcaattccg cctctgcctc
     3841 gcgctctttc agttcccggc caaatgcttc gggtgttcct gtcaaaatcg gaaaagttcc
     3901 gtaatgcatc ggaatcaccg tccgcgcttt gaccagcttt gcggcttctg ccgcacgact
     3961 gggtcccatc gtgaaatggt cgcctatgca aacgagcatg acatcgatgt cgtggaaaag
     4021 cgttagcagc gccatgtcgg aaaacaaatc tgtatcgcct gtgtgataaa ttgtcggtcc
     4081 gccgcgaata gtaataacaa aacctcccgg tgcaccgcca tgacgcagcc catggcgttc
     4141 atcagctgcg acaccggatc catgatgcgc gcgaacgaac gcgactttta cttcgctatc
     4201 cagcagtgtc agttcgccgc caaaatgacc aaccgtgtcc gtttccgcct ggtccgccgg
     4261 ataaccgaga tgtttcacca tcgcgtcggc tagatcgaag gtcgccacca gttttgcccc
     4321 cgtctttttt ccgatgtcga ccgcgtcacc gacgtgatcg gaatgaccgt gcgtaatcag
     4381 gatgagatcg acatgcttga gcgcggcgat ttcagccttg gcattttcca aaacaggatt
     4441 cgaaagccac ggatcgacga gcagaacttt cccgcttggg gtcacaatct tgaaagccga
     4501 ctgaccgtac caagtaagtt gtgtatccat ggaaatcacc aaatcgaaaa cctttggtct
     4561 agcaagc
//
LOCUS       DATDAJ010000085         3588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_523339, whole genome shotgun sequence.
ACCESSION   DATDAJ010000085 DATDAJ010000000
VERSION     DATDAJ010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3588
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523339"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(287..1681)
                     /locus_tag="VIS53_02055"
     CDS             complement(287..1681)
                     /locus_tag="VIS53_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766598.1"
                     /translation="MGKIANHLRTLAIAVLILLTASAFGAAEAPELQQLRGQLKKAQH
                     AEDKPAIIELGRRIVAIAPNDAGTWDTLAQTQVESEDLDGLERTLDQWQKASRRPPAA
                     VEDFRAGLCFKRKDYQCAEQHWLAFIATKPPRTDIATDYDNLAELCAAQSRWADHAAY
                     LTKAIAAQDTAARRVRRAVAFLRLHNWDAAYGDMAKANKMDATNPEVKVWLPEFERLQ
                     KFLPQIKPLDAQIAKSPDDVALLLERARVLILAGRPLLAIDDAERAFKLQPTSMRARI
                     ELAEALLDAGQPENAAKLEVDRYLRRGEDKHVSDEALRELGTLDTRLSANPNDADALI
                     ARARILRDLRQFTLALADANAALAINDKSAAAHFEAAQDLDGLDRQKEALLHARIATE
                     LDPHNSNIWLFRGVLERQRADFAGAVASQTHSIQISESLAALSEREQCQRRIGKTAEA
                     DADLRRIQQLAPQR"
     gene            complement(1696..2370)
                     /gene="nth"
                     /locus_tag="VIS53_02060"
     CDS             complement(1696..2370)
                     /gene="nth"
                     /locus_tag="VIS53_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEY5766599.1"
                     /translation="MTARERVAHLLKAWPKIYPNAHCELDFRNPLQLLVATILSAQST
                     DKRVNIVTPALFRKYRTAKDYADAPLPELESAIKSTGFYRNKAKSIRGAMREIVHKHG
                     GKVPETMQELCALPGVGRKTANVVLGNAFHIDEGIVVDTHVIRLSQRLGLTKQNDPVK
                     IELDLMKLVPREHWTNWSHWLIWHGRRRCYARKPDCSRCEVFELCPSGKIFLRTGKAL
                     KPPENA"
     gene            complement(2473..3084)
                     /locus_tag="VIS53_02065"
     CDS             complement(2473..3084)
                     /locus_tag="VIS53_02065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766600.1"
                     /translation="MKRMLVLSTFICFAMICACQKQDSAAEAQLAQQKAELDAREKAL
                     DEREKTLDEREKALANSRIIQSRQRARSPAEVEAEREKRLQQLPPELRALIPSREQMN
                     SARLAKEREAALQGQTPDPEQAKAERERRIQQLPPELQALIRDRSLLNAPTDEKGTAT
                     ADRAERLHRLEEERRKKMNAIASPNAESSDTQAGSPSPSPTPE"
     gene            complement(3127..>3588)
                     /locus_tag="VIS53_02070"
     CDS             complement(3127..>3588)
                     /locus_tag="VIS53_02070"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5766601.1"
                     /translation="AGTAQDTYVDQFNVLGFVPSSKRFKHDIQPMDKASEAILALKPV
                     IFKYNSDKKGRTQYGLIAEEVAEVASDLVFRHNNGEIATVRFEQIGAMLLNEFLKEHK
                     KVQALEATVAKQQKGMEILTAQLKEQAAQIQKVSAQIEMTKPASKVVVNEP"
BASE COUNT          658 a         1017 c          996 g          917 t
ORIGIN      
        1 agaacacaac agaaagaaat gagaatgcgt cggcatcttt ttagcgccaa ctgcgctctg
       61 gtcagatgag cctggggcaa cgccccagga aatccgggca gacaattatc aatgaagggc
      121 tgaaggcgcg attcaatccc ggagtgagtc gcgctttcag cgctcggtct tttcgcttca
      181 tctatcctgg gacgctgccc caggctaccg atgaatgctg cgccgttggc gcgacgcgga
      241 caccttcccc ccttcgccgt ttctccgatt cgccgagtca ttctcactat ctttgtggcg
      301 ccagttgttg tatccggcgc agatcggcgt cggcttcggc tgtctttccg atgcggcgtt
      361 ggcattgctc gcgttcgctt aatgcggcca gtgactcact aatttgaatt gagtgcgttt
      421 gtgacgcgac ggctcccgcg aaatcggcgc gctgccgttc gagcacgccg cgaaagagcc
      481 agatgtttga attgtgagga tccaactccg tggcgatgcg agcatgcaac agcgcctcct
      541 tttgccggtc cagaccgtcc aggtcttgcg ccgcttcgaa gtgtgcggct gccgatttat
      601 cgttgattgc cagcgcggca tttgcgtcgg cgagcgcgag cgtgaattga cgcaggtctc
      661 tcaaaattct agcgcgcgca atcagcgcgt cagcatcatt gggattcgct gataaacgag
      721 tgtccagcgt tccaagttcc cgcaatgcct catcgctaac atgcttgtct tctccccgac
      781 gaagatacct gtcgacctct aattttgccg cgttctcggg ttggcctgca tccagcaatg
      841 cttcggctag ttcgatgcgt gcgcgcatcg atgtgggctg aagtttgaat gcgcgttcgg
      901 cgtcatcgat cgccagtaac ggacggccgg cgagaatcaa aacgcgggca cgttcaagca
      961 acagcgcgac gtcatctggt gattttgcga tctgcgcatc gagtggtttg atttgcggca
     1021 ggaatttttg taatcgctcg aattccggaa gccacacctt cacttctgga ttggtggcat
     1081 ccatcttgtt cgctttcgcc atgtcgccgt aagcggcgtc ccagttatgc aggcgcagga
     1141 atgcgaccgc acgccgcacg cggcgcgcag ccgtgtcctg tgccgcgata gccttcgtca
     1201 ggtacgccgc atggtccgcc caacgcgact gcgctgcgca taattccgcc aagttgtcgt
     1261 aatcggtcgc aatgtcagtt cgcggcggtt tcgtcgcgat gaacgcaagc cagtgctgtt
     1321 cggcacactg ataatccttg cgcttgaagc acagtccggc gcggaaatct tcgaccgctg
     1381 cgggcggtcg ccgtgatgct ttttgccact gatcgagcgt acgctccaag ccatcgaggt
     1441 cttcgctttc gacttgcgtt tgcgcgagcg tgtcccatgt cccagcatcg ttcggagcga
     1501 tggcgacaat gcgccggccc aattcaatga ttgcgggctt gtcttccgcg tgttgagctt
     1561 tcttcagctg gcctcgcaac tgctgaagct ccggcgcttc cgcggcgccg aaggcgctgg
     1621 cagtcagcaa aataagaacg gcgatcgcga gcgttctcaa gtggttcgcg atcttgccca
     1681 tcgcgaccga acggttcaag cattttcggg gggcttcagc gccttgccag tgcgcaagaa
     1741 gatcttgccg ctgggacaga gttcgaagac ttcgcatcgg ctgcagtccg gcttgcgcgc
     1801 atagcaacgg cggcgcccgt gccagatgag ccaatgactc cagtttgtcc aatgctcgcg
     1861 cggcacgagc ttcattaaat caagctcaat cttcactgga tcgttttgtt tcgttaggcc
     1921 aaggcgctgc gataggcgaa tcacgtgcgt gtcgaccacg atcccttcat ctatatgaaa
     1981 ggcgttgccc agcaccacat tcgcagtctt gcggccaacg cccggcaacg cgcataattc
     2041 ctgcattgtt tcgggcactt tcccgccgtg cttatggacg atttcgcgca tcgcgcctcg
     2101 aatgcttttc gctttgttgc gatagaagcc cgtggacttg atcgcgcttt ccaactcggg
     2161 aagcggcgcg tccgcataat ctttcgctgt gcggtatttc cgaaacaggg ctggcgtaac
     2221 gatgttgacg cgtttgtctg tggattgcgc cgagagaatg gtcgctacaa gcagctggag
     2281 cggatttcga aagtccagct cgcaatgcgc atttggataa atttttggcc aggctttcag
     2341 aaggtgcgcc acgcgctcgc gagcggtcat ctggctatta ttccccaagg cggctataga
     2401 tttcaatcca cctttggaat caacgcctcg aaatcctcgc tttcgtgtgg aactgcgatt
     2461 agcggatcgg atttattccg gcgtgggcga gggagacggc gaaccggcct gggtatcaga
     2521 tgactctgcg ttgggagatg ctatcgcgtt catctttttt cttcgttcct cctcgagacg
     2581 atgcaatcgc tccgctcgat ctgctgttgc cgtgcctttt tcatctgtgg gtgcattcag
     2641 taatgaacga tcacgaatga gggcctgaag ttcgggagga agctgttgta ttctccgctc
     2701 tctttcggct ttcgcctgct cgggatcggg cgtctgcccc tgaagcgcag cttcccgctc
     2761 ttttgcaagc cttgcagagt tcatctgctc gcggcttgga atcagcgcac gaagctccgg
     2821 agggagctgt tgtaatcgct tctctctctc cgcttccacc tccgcggggc tgcgagcccg
     2881 ctgccgcgac tgaatgatac ggctgttcgc cagggctttt tccctttcat ccaatgtttt
     2941 ctctctttca tccagtgctt tctcgcgtgc gtccagttca gctttctgtt gagcaagttg
     3001 cgcttcagct gccgaatcct gtttttggca ggcgcaaatc atggcaaaac agatgaacgt
     3061 cgaaaggacg agcatccttt tcatatcaga ggcaaactat aagtccgtag ttgtgatgaa
     3121 caacagctaa ggttcgttca cgaccacttt cgatgcaggt ttggtcatct caatctgtgc
     3181 gctcactttt tggatttgcg cggcctgctc tttcagctga gccgtgagaa tctccattcc
     3241 cttttgttgc ttggcgacag tcgcttccaa ggcctgcact tttttgtgct cttttaggaa
     3301 ctcgttgagc aacatcgcgc cgatctgctc aaaccgcacg gtcgcgatct caccattgtt
     3361 gtggcggaag acgaggtcgg aagccacctc agccacttcc tcggcgatta aaccatattg
     3421 cgtcctgcct ttcttgtcgc tgttgtattt gaagattact ggcttgagcg ccagaatggc
     3481 ttcgctggcc ttgtccatcg gttgaatgtc gtgtttaaac cgcttggacg acgggacgaa
     3541 gcccaacacg ttaaattgat cgacatatgt gtcttgggcg gtgccggc
//
LOCUS       DATDAJ010000086         2618 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_525595, whole genome shotgun sequence.
ACCESSION   DATDAJ010000086 DATDAJ010000000
VERSION     DATDAJ010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2618
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525595"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..497
                     /locus_tag="VIS53_02075"
     CDS             <1..497
                     /locus_tag="VIS53_02075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766602.1"
                     /translation="SIEVPERCAPATQMTLLSVNESLECFGFKKLANSYVELINTTAL
                     RRVNPVGTNNVFGSGSSSPVAEFDSFLLVCCYRRHHHPRPCLPRRYHGFLYLPAVPEW
                     SDFDDRHKSGSRAILLSPKESIYRQVIGSSDKSRHRVLKLCARRSFEAGQNNRRRRSY
                     REIS"
     gene            complement(906..1115)
                     /gene="rpmI"
                     /locus_tag="VIS53_02080"
     CDS             complement(906..1115)
                     /gene="rpmI"
                     /locus_tag="VIS53_02080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEY5766603.1"
                     /translation="MPKSIARSKTRKAVAKRFKITARGKVLRSRSSRRHLLSTKSAKR
                     KRRLGKAARVDKTDVARIKANLPFG"
     gene            1277..2557
                     /locus_tag="VIS53_02085"
     CDS             1277..2557
                     /locus_tag="VIS53_02085"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5766604.1"
                     /translation="MHSPARKQPQVIIVGAGFGGLEAAKKLACEDVRLTLIDRTNYHL
                     FQPLLYQVATAALSPADIAAPVRAILSNCKNVEVILAEVESVDVEAKKVRTKDRVFDY
                     DYLILATGARHSYFGHDEWEKLAPGLKSLEDAVELRRRILLAFEYAEKIEDEAARKAA
                     MTFVVIGGGPTGVEMAGAIAEISRYTLAKNFRHIDPSQARVILIEGSPCLLAAYPPAL
                     SESARKQLLELGVEVRTNARATNITEEGVQVDGEFIPCRVKIWAAGNVASFVGKTLSV
                     PVDRVGRVIVNDDLSIPGHPEVQVIGDLANFPHQTGEPLPGVSPVAMQQGRHAARSIL
                     RMIRGEKPKLFRYFDKGSMATIGRNKAVADLKFFHLSGLPAWLAWLFVHIIFLVGFRN
                     RLLVLFQWAWAYLSFDKGARLITRNFQSELRPPA"
BASE COUNT          571 a          689 c          737 g          621 t
ORIGIN      
        1 cgagcatcga ggtgcccgag cgatgcgcac cggcaacgca gatgacgctg ttgtcggtca
       61 atgagtcttt ggagtgtttt ggcttcaaga aactcgcaaa tagttatgtc gaattgataa
      121 ataccacagc cctgcgcagg gtaaaccccg ttggaacaaa caatgtcttc gggagcggtt
      181 caagttcccc tgttgccgag tttgattcgt ttctgctggt atgttgttac cgaaggcacc
      241 atcacccaag gccgtgtttg ccccgccgat atcacggatt cttatactta ccagccgttc
      301 ctgaatggtc tgatttcgat gatcgtcaca agagcggcag ccgtgcgatt ttattgtcgc
      361 cgaaggagtc catttaccgc caagtaattg gctcgtcgga caaatctcgt catcgcgtgt
      421 tgaaactttg tgcacgccgt tctttcgaag caggacaaaa caaccgccgg aggagaagtt
      481 accgcgagat cagttgacgc acacttggca aatagattgc caattcgtgc gttttgatgc
      541 ggctcggtgc gcgttcgacg agttacctat tttcataggt aaattcccat tttaagggag
      601 tgtgtccgcc gggactcaaa cccggaacca acgccttgac agtgcgttgc acttttgttt
      661 gcatcgagcg cgtgaaatgg ctcgcgttcc tcttgcttgg ttctgttttc gttgcggcga
      721 catcctgtac aacgcttgtc aatcggcgtg atctttacag ccccgagcct gcgcctgatt
      781 cattggaagc ggctcggcag tggtatggcg tggggaccat aagtacgacc acgacaatcc
      841 gaacacaaag agcagcggga gagatcgcgc cgccgccaga ctttcgttac taagctacag
      901 tcgtgtcagc cgaaaggaag attagccttt attctcgcga catctgtctt gtcgacgcgc
      961 gctgctttgc ccagccggcg tttgcgcttt gcgcttttcg tcgacaatag atggcgtcgc
     1021 gaggaacgtg atctcaggac ctttccacgg gcagtaatct tgaagcgttt cgccactgct
     1081 ttgcgcgttt tgctgcgtgc aatcgacttc ggcatacggc ggcaaagtta attcggccaa
     1141 gcgcaatgac aaacgcttta ttgtagtgcg tctgtgccag gcccgaatgc tttcggggtt
     1201 caaagaatgg agggacgggc tgcccgaagg gctgtctcgc tggcgcgagc ggatcaaacg
     1261 ccctacaatt tgtcggatgc attctcccgc acgtaaacag ccgcaggtca tcattgtcgg
     1321 tgcaggtttt ggcgggcttg aggcagcgaa gaagcttgcc tgtgaagatg tgcgtctgac
     1381 gctaatcgac cgcacaaatt accacctgtt tcagccttta ctctatcaag tggcaacagc
     1441 ggcgctctcg cccgcagaca ttgccgcccc cgtgcgcgcg atattgagca actgcaaaaa
     1501 cgtcgaagtc atcctcgccg aggtcgagtc cgtggatgtc gaagccaaaa aagtaagaac
     1561 gaaagatcgg gtatttgatt atgactatct cattctcgcc actggcgcgc ggcactccta
     1621 ctttggacat gacgagtggg aaaaacttgc gccgggatta aaaagtcttg aagacgcggt
     1681 tgagctgcgc cgacggatcc ttttagcgtt cgaatacgcg gaaaaaattg aagacgaagc
     1741 ggcgcgcaag gcggcgatga cgttcgttgt catcggcggt ggcccgaccg gtgttgaaat
     1801 ggcgggtgcg atcgcggaaa tctcgcgcta cacactcgcc aaaaactttc gccacatcga
     1861 tccatcgcag gcccgcgtga tcctcatcga aggctcgccg tgcctgctcg ccgcgtatcc
     1921 gccggccttg tccgagagcg cgcgaaaaca attgctcgag ctcggcgtgg aagtgcgcac
     1981 gaacgcacgc gcgacgaaca ttaccgagga aggtgtgcaa gtggacggcg aatttattcc
     2041 gtgccgcgtg aaaatctggg cggccggcaa tgttgcgtca ttcgtcggga aaacactcag
     2101 cgtaccggtt gaccgtgttg gcagggttat tgtgaatgac gacctcagca ttccgggaca
     2161 tccggaagtg caggtgattg gcgacctggc aaattttccg catcaaactg gagagccttt
     2221 gccgggggtc tcgcccgtgg cgatgcaaca ggggcgccac gcagctcgca gtattttgcg
     2281 aatgatccgt ggcgaaaagc ccaagctatt tcgatatttc gataagggaa gcatggctac
     2341 gatcggccgg aacaaagccg ttgcggatct aaaatttttt catctcagcg ggcttcccgc
     2401 gtggctggca tggttattcg tgcacatcat cttccttgtc gggttccgca atcggctgct
     2461 tgtgctcttc caatgggcat gggcgtattt gagcttcgat aaaggtgcac gtttgatcac
     2521 gcgcaatttt cagtcggaac tcagaccgcc ggcgtgacga ccaatgtcat gttgagcgaa
     2581 acgaaacatc tctgattatc attttcgttc gcgcgcca
//
LOCUS       DATDAJ010000087         3463 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_535226, whole genome shotgun sequence.
ACCESSION   DATDAJ010000087 DATDAJ010000000
VERSION     DATDAJ010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_535226"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..694
                     /locus_tag="VIS53_02090"
     CDS             <1..694
                     /locus_tag="VIS53_02090"
                     /inference="COORDINATES: protein motif:HMM:NF013213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY5766605.1"
                     /translation="AAIGVHPSHAEEAEEDVITPLRDLAKNSRVVAIGETGLDYHRLA
                     SERVAKEDQVQVMTALRSETDEEIEAQIRDGAYKSKQASLFQQQLDLAVELGLNVVIH
                     QRDAWEDTLEVLRPYAGNVRGVFHCFGGSLDQANEVLNLDHLVSFTGIVTFKNGRAVR
                     QVAAEIPLWKFMVETDCPFLAPAPFRGKRCEPAHTRIVAETIAAARGVSLEEISEATT
                     ETAEQFFRFNRA"
     gene            691..1365
                     /locus_tag="VIS53_02095"
     CDS             691..1365
                     /locus_tag="VIS53_02095"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5766606.1"
                     /translation="MTIDKGRARPPGAPGTRNETERRAIHPYRWITVLFALLVGSCAA
                     PDTRHHIVISTRDQKLALLDRGSLMATYPVSTSKFGLGDWRGSRFTPLGNLQIAEKIG
                     DNAQPGTVFKSRRRTGEIVLINSPGRDPIVTRILWLRGLEAQNANAFRRGIYIHGTPE
                     EWKIGSPASYGCVRMRSSDIIQLYNIVGVGAAVTIVNAPLVSAVPGMVSGHSMGPENT
                     APFVMR"
     gene            complement(1445..2458)
                     /gene="gmd"
                     /locus_tag="VIS53_02100"
     CDS             complement(1445..2458)
                     /gene="gmd"
                     /locus_tag="VIS53_02100"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017944086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5766607.1"
                     /translation="MKKALITGITGQDGSYLADLLLEKGYEVHGIIRRASTFNTSRID
                     HLYADPHVNDVRMFLHYGDLSDSVNLVKLLYELKPDEIYHLGAQSHVRVSFDIPEYTS
                     DVTGVGTIRILEAIREAGLRSRFYQASSSEMFGKAQQTPQTEKTPFWPRSPYGVAKVF
                     SYWATVNYRESYGLCASNGILFNHESPRRGETFVSRKISRAVAAIKQGMQMELFLGNL
                     DAKRDWGYAPEYVEGMWRIVQLGEGDDFVLATGETHTVREFVEAAFAHVDLDWKQFVK
                     HDPRYERPAEVDLLLGDASKAKRILGWEPKVRFDELVRIMVDADMDLLSHNTVRKHLG
                     KLP"
     gene            complement(2528..3277)
                     /gene="rph"
                     /locus_tag="VIS53_02105"
     CDS             complement(2528..3277)
                     /gene="rph"
                     /locus_tag="VIS53_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEY5766608.1"
                     /translation="MMQRNDGRAPDEIRPINFELNVAPHASGSVLVSMGQTCVICAVT
                     IEEGVPRWMKEQGVTGGWLTAEYSMLPYSTQPRKPRDVVKGRIDGRSVEIQRLIGRSL
                     RAVIDLEKLGPRTIWVDCDVLQADGGTRTTAITGASLALAIACRKFVRENKLVAPPMQ
                     KLVAAASAGILDGQAIVDLNYEEDKLVAVDFNLVATEDGDFVEVQSSGEEATFTGSQL
                     DEMVALGRNGISALIGAQRAVLARIMVTPPE"
     gene            complement(3274..>3463)
                     /locus_tag="VIS53_02110"
     CDS             complement(3274..>3463)
                     /locus_tag="VIS53_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766609.1"
                     /translation="SPLTFLSGARRQCRSPSAFRYYFSRKGFIERRPAGCVKAIAMAG
                     SLGKMYIAESRVYIYVLQ"
BASE COUNT          723 a          979 c          989 g          772 t
ORIGIN      
        1 cgcggcgatt ggtgttcatc ccagccacgc agaggaggcg gaggaggatg tgattacgcc
       61 cttgcgcgac ctggcgaaga actcgcgggt cgtggcgatt ggcgagaccg gcctggatta
      121 tcaccgcttg gcgagtgaaa gagtggctaa ggaagatcag gtgcaggtca tgaccgctct
      181 gcgaagtgag actgatgaag aaatcgaagc gcaaattcgc gacggtgcgt acaaatcgaa
      241 acaagcgagt ttgttccagc agcaactcga cctggccgtt gagcttgggc tcaatgtcgt
      301 gattcatcaa cgcgacgcgt gggaggacac gctggaggta ctgcgccctt atgcgggcaa
      361 cgtgcgcgga gtttttcact gcttcggtgg ctctctcgat caggcgaatg aggttctcaa
      421 tctcgaccac ctcgtttcgt ttaccggaat tgttactttc aaaaacggcc gagccgtgcg
      481 acaggtcgcg gcagaaatcc cactctggaa atttatggtc gaaaccgatt gcccgttttt
      541 ggcgcccgcg ccttttcgcg gaaagcgctg cgaacctgcg catacgcgca tcgtggcaga
      601 aacgatcgcg gcagcgcgcg gtgtttccct ggaggaaatt tctgaagcaa ctaccgaaac
      661 cgcggagcaa ttcttcaggt ttaatcgcgc atgacaatcg ataaaggtag ggcgcgaccg
      721 ccgggcgcgc cgggaacgcg aaatgaaacg gaacgcaggg cgattcatcc ataccggtgg
      781 atcacagtgc ttttcgcgct cttggtcggc tcttgtgcgg cgccagacac gcggcaccac
      841 atcgtgatca gtacacgcga ccaaaagttg gcgctccttg atcgcggcag cctcatggcc
      901 acttatcccg tctccacctc caagttcggt cttggcgatt ggcgaggcag caggtttacg
      961 ccgctcggca atttgcaaat agcggaaaaa attggcgaca atgcgcaacc gggcacggta
     1021 ttcaagagtc ggcggcgcac cggcgaaatc gtcctgatca attcgcctgg tcgtgatccg
     1081 atcgtgacgc ggattctgtg gttgcgtgga ctggaagcgc aaaatgccaa cgcatttcgg
     1141 aggggcattt acatccacgg cacacccgag gaatggaaaa tcggttcgcc cgcgagttac
     1201 ggatgcgtcc ggatgcgctc cagtgatatc atacaactgt acaacatcgt tggagttggc
     1261 gcggcggtca cgatcgtgaa cgcgccgctc gtcagcgcag ttcccggtat ggtttcaggt
     1321 cattcaatgg gaccggaaaa cacggcgcca tttgtgatgc gctaggctgc gtttgcatgt
     1381 gatgcagaca atcctgtctg cattccttcg ggaatcgctc gcaggcagga ttgcctgcgt
     1441 cacctcacgg cagcttgccg aggtgttttc tgactgtgtt atgcgagagc aaatccatgt
     1501 ccgcgtcgac catgatgcgc accagctcat cgaatcgtac tttcggttcc caaccgagga
     1561 tcctcttcgc tttcgacgcg tcaccaagca gcaggtcgac ttcggccggg cgctcgtagc
     1621 gcgggtcgtg ttttacgaat tgcttccaat ctagatcaac atgcgcgaag gccgcttcca
     1681 cgaactcgcg caccgtgtgc gtttcgccgg tagccagcac gaagtcgtcg ccttcaccga
     1741 gttgcacaat tcgccacatc ccttcgacgt actccggtgc atatccccaa tcgcgttttg
     1801 cgtccaggtt gccgaggaat aattccattt gcatgccctg tttaatggca gcgactgcgc
     1861 gcgaaatttt gcggctgacg aaagtttcgc cgcggcgcgg gctttcatgg ttgaacaaaa
     1921 tgccgttgct ggcgcaaagg ccgtagctct cccgatagtt aacggttgcc caatatgaga
     1981 aaacctttgc cacgccgtaa ggactccgtg gccagaatgg cgtcttctca gtttgtggcg
     2041 tttgctgggc cttgccgaac atttcgctgc tcgaggcctg ataaaagcgc gaacgcaatc
     2101 cggcttcccg gattgcttcc agaatgcgaa tcgtgccgac gccggtgacg tcggaagtgt
     2161 actcagggat atcgaagctc acgcgcacgt ggctctgcgc gcccagatgg taaatttcgt
     2221 ccggcttcaa ttcgtaaaga agcttcacca aattcaccga atcgctgaga tcgccgtagt
     2281 gaagaaacat tcggacgtcg ttaacgtgcg gatcggcgta gagatgatca atgcgcgaag
     2341 tgttgaacgt gctggcgcga cgaatgatcc cgtggacttc gtagcctttc tccagcagca
     2401 gatcagccag ataacttccg tcctggcccg taatcccggt gatcagtgcc tttttcattt
     2461 gttgtagtgt agcgcatgcg tcccgcttgc aattcaaacg gcgcgcaagc cagaggctcg
     2521 cgctacttta ctccggcggg gtcaccataa tccgggctaa gaccgcgcgt tgggcgccaa
     2581 tgagcgcgct gatgccgttg cgtccgagcg ctaccatttc atccagttgc gaaccggtaa
     2641 atgttgcttc ttctcccgag ctttggactt ctacaaagtc gccgtcttcg gttgcgacga
     2701 ggttgaaatc aactgcaacg agtttgtcct cctcgtaatt cagatccacg atcgcctggc
     2761 catcgagaat accggcgctt gctgcggcaa ccaacttttg catcggcggc gcaacgagtt
     2821 tgttctctct aacgaatttt cggcaggcga tggcgagcgc caggctcgcg ccggtaatcg
     2881 cggttgtgcg cgttccgcca tcggcttgca agacatcgca atccacccag atcgtgcgtg
     2941 gtccgagttt ttccaaatcg atcaccgcgc gcaacgaccg gccaatcaag cgttgaatct
     3001 cgacgctgcg gccatcgatg cggcctttga cgacgtcgcg aggtttgcgc ggttgcgtgg
     3061 agtacggcag catcgaatat tccgcagtaa gccagccacc ggtcacgccc tgttctttca
     3121 tccagcgcgg cacaccttct tcgatcgtga cggcgcagat cacgcacgtt tggcccatgg
     3181 agactagaac cgaaccgctc gcgtgcggcg cgacgttcaa ctcgaaattg atcggacgaa
     3241 tttcgtctgg cgcgcggccg tcatttcgct gcatcattgt aaaacgtaga tgtagacccg
     3301 actttctgcg atgtacattt tgccgagtga cccagccatc gcaatcgcct tgacgcatcc
     3361 agcgggtcgt cgttctataa agcctttgcg tgaaaagtaa tatcgaaacg cggagggcga
     3421 tctgcattgc cggcgcgcac cgctcaggaa cgtcaatggt gac
//
LOCUS       DATDAJ010000088         4684 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_541378, whole genome shotgun sequence.
ACCESSION   DATDAJ010000088 DATDAJ010000000
VERSION     DATDAJ010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4684
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_541378"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..1016
                     /locus_tag="VIS53_02115"
     CDS             138..1016
                     /locus_tag="VIS53_02115"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY5766610.1"
                     /translation="MSREQIVQLDKGGIIAFQEYGDPSGVPVIFCHGWPSSRTMAQLA
                     DEPARSLGVRIISPDRPGISGSSMQFDRKLGDWPSLVEQFVDNVGIGEFRILAISGGA
                     PYAYATAIAIPERVRAIAIVGGVIPFAELKDFKGLLPLYRHMLAFYRNRPQLLRQLFR
                     LARPFLSFRAPIRLRPLILKMLLLRPCDAASLRDDAAFEAIFESQRRAWRGSVEGVLA
                     DARIYAEPWGFAVEDVNVPVRLWHGIEDRAFAVRLAEEIANRFPNCKARFIQEEGHYS
                     LPIRHMREILEDLISI"
     gene            complement(1151..2311)
                     /locus_tag="VIS53_02120"
     CDS             complement(1151..2311)
                     /locus_tag="VIS53_02120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5766611.1"
                     /translation="MNILYVESSRSWGGQEYRTCLEINWLNAHGHPAWLICNPESQVH
                     SKASELGTRLVTMPLRTRVDPLCTLRLWKFCRQNKIDLVKTYSSKDHWICLPLFVCGI
                     PLSRARCITDPIGSQRRAFVFKHGCSQIVADASVIKRQLVEQHGIDPAKIEVIGSAVD
                     LKKFKPPLDRAKFRREIGLGDETPLIGNIGMIRPDKGQLELVKSAPLVLEKYPDARFV
                     IVGQGTGILKRGINVRNAIDRAGLADKIIMTGYRWDTPNVYAACDVIVIASLRTEASP
                     IVLREAFASGRPVIATKVGDIPEIVRHRENGLLIEPGNTQELASAILEFISDPELAAH
                     CAANGLRYATENFSFDKMMDAKVRADLAVLQKKKGRESPSRSSQDITLSGSN"
     gene            complement(2346..2615)
                     /locus_tag="VIS53_02125"
     CDS             complement(2346..2615)
                     /locus_tag="VIS53_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY5766612.1"
                     /translation="MSEPDLRAQIKEMLVKNLMLQVTPEQIGNELPLFGPDGLGLDSI
                     DALELVVSLEKTFGVGVPNSDVAGKALRTVNTIHDYILEKRAAAA"
     gene            complement(2809..3132)
                     /locus_tag="VIS53_02130"
     CDS             complement(2809..3132)
                     /locus_tag="VIS53_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEY5766613.1"
                     /translation="MSFLASFMNLAGPDLIVILLIILVLFGAKKLPELARGMGQAVKE
                     FQKAKDEFNDELHKAGKSDTQVAKHDVKPAESTVARIDNQDASNVTAPQPSAAVTPGE
                     KADQV"
     gene            3254..4117
                     /locus_tag="VIS53_02135"
     CDS             3254..4117
                     /locus_tag="VIS53_02135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY5766614.1"
                     /translation="MRPIWKGSISFGLVYIPVAVYSATREEKLSFRQLRSSDLSPIRY
                     KKVAEADSKEVPADQIVKGFEYERGHYVVMKDEDFEKVRIESTHSIDITDFVDLEQVD
                     PKFFYKPYFLEPQKGGEKAYAVLHKALSGTGKIGIAKVVISNREHLAAVKPDGLFLIL
                     ELMHFASEILSAEILQNGSNAAVTEKELKMAQALIESMSVVWEPEKYRDEYRTALMEI
                     IEQKAQHKEIAAKAPAAPTPTNVVDLVKVLQDSLNRTQAVKQKRPSARDGARRSTSTL
                     VKQRRRAGALG"
     gene            4174..4443
                     /gene="rpsN"
                     /locus_tag="VIS53_02140"
     CDS             4174..4443
                     /gene="rpsN"
                     /locus_tag="VIS53_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEY5766615.1"
                     /translation="MAKTAWINRNERKRTTAKKYAAVRAELKAKKDYAGLAQLPRDAS
                     PTRVVNRCEVSGRRRAFIRRFKMSRLTFRELASQGLIPGVTKSSW"
     gene            4499..>4684
                     /locus_tag="VIS53_02145"
     CDS             4499..>4684
                     /locus_tag="VIS53_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766616.1"
                     /translation="MNFVTIPLALAPIAETIVQHWDPPMLTFGKLLAIAVLVLLNGFF
                     VAAEFALVKVRTSHLNTM"
BASE COUNT         1074 a         1233 c         1306 g         1071 t
ORIGIN      
        1 atgttaagcg aagcgctgca acgaaatgcg aagcatgagg ccaggctttc aaacatctct
       61 gatctatttt cgcttgggga gactggtgta aaattgatct gagattttcg ctcataatga
      121 catgtgatgg gctgtagatg agtagagaac agatcgttca actcgataag ggcggcatca
      181 ttgcttttca ggaatacggc gatccaagcg gagtgcccgt gattttctgc cacggctggc
      241 cgagttcacg cacgatggcg caactcgcag atgaaccagc gcgctctctc ggtgttcgca
      301 ttatttcacc ggaccggccg ggcatcagcg gctcgagcat gcaattcgat cgaaagctgg
      361 gcgactggcc gtcgcttgtc gaacagttcg ttgataatgt tgggattggc gaattccgaa
      421 ttctcgcgat ctctggcggc gcgccctacg cgtatgcgac ggcgatcgcg atacccgaac
      481 gggtgcgtgc gattgctatc gtaggcggag tgattccatt tgctgagctg aaggacttca
      541 aaggattgct gccgctctat cgccatatgc tggcctttta tcgcaatcgg ccgcaactgt
      601 tgcggcaatt gtttcgcctg gcccgaccgt ttttgtcgtt ccgcgcaccg atccggctcc
      661 gtccgttgat tttgaagatg ctgctattgc gcccgtgcga cgcggctagc ttgcgcgacg
      721 acgcagcttt cgaagcgatt ttcgaaagcc aacggcgcgc ctggcgcggc tcggtggaag
      781 gcgtattggc cgacgcacgc atttacgcgg agccgtgggg atttgcggtc gaagatgtaa
      841 acgtgcctgt gcgactctgg catggaatag aagatcgcgc tttcgccgtt cggctggcgg
      901 aagaaatcgc gaaccgtttc ccgaattgca aagcgcgatt catccaagaa gaaggacatt
      961 actcgctgcc gattcgccat atgcgcgaga ttctcgagga tttgatctcc atttaactcg
     1021 aatttttcat cacgtgaaag catccccaga acaaaaatga acgatgacct tgaaactctc
     1081 gaggtgcccg ggctaatctt cgcgccggtt cgcagcagat ttgaccgctt ccgtcagctg
     1141 attgatgcgg tcaattgctc cccgacaatg tgatgtcctg cgaagagcgg gaaggagact
     1201 cgcggccttt tttcttctgc aaaacagcaa gatccgcgcg caccttcgcg tccatcattt
     1261 tgtcgaacga aaaattttcg gtggcgtagc ggagaccgtt cgctgcgcaa tgcgccgcca
     1321 gttccggatc ggaaatgaat tccagaatcg ccgacgccaa ttcctgagta ttcccgggtt
     1381 caatgagcag accgttctcg cgatggcgaa caatttctgg aatatcgccc actttcgtag
     1441 cgatcacggg ccttccgctg gcgaaagcct cacgtagaac aattggagag gcttcggtgc
     1501 gcagcgacgc aataacaatc acgtcacaag ccgcgtatac gttcggcgtg tcccagcgat
     1561 agccagtcat tatgattttg tcggcaagtc cggcgcgatc gattgcgttc ctcacattga
     1621 tgccgcgctt caaaatcccg gtgccctggc cgacgatcac gaaacgagca tcgggatatt
     1681 tctccaagac aagaggcgct gatttgacca actcgagttg acctttgtcg ggacgaatca
     1741 tgccaatgtt gcctatgagc ggggtttcgt cgccaagacc gatttcacgg cgaaattttg
     1801 cccgatcgag cggaggcttg aactttttca aatcgacagc tgaaccgatg acttcaatct
     1861 tggcgggatc aattccgtgt tgttccacca attggcgttt gatcaccgac gcgtcggcaa
     1921 cgatctgcga acagccgtgc ttgaaaacaa aggcgcgacg ttggctgccg attggatccg
     1981 tgatgcagcg cgcacggctc aatggaattc cgcaaacgaa aagtggcagg caaatccagt
     2041 gatcctttga gctgtacgtt ttgaccagat cgattttgtt ctgccgacaa aacttccaga
     2101 ggcgcaatgt gcagagcggg tcaacgcggg tgcggagcgg catcgtgacg agccgcgtgc
     2161 cgagttccga cgctttcgag tggacctggc tttctggatt gcagatcaac catgctggat
     2221 gcccgtgtgc gttgagccag ttaatctcca gacaggtgcg atattcctgt ccgccccagc
     2281 tgcggctgct ctctacgtag agaatgttca cgtcgaaacg ccacggcagt gcgcggttgg
     2341 cacatctacg cagccgcggc gcgcttttcg agaatataat cgtgaatcgt gtttacagtc
     2401 cgaagcgctt ttcccgctac atcggaattt ggaacgccca cgccgaacgt cttttccaga
     2461 ctcacaacca gctccaacgc gtcgatggaa tcgaggccca gtccatcggg accgaaaagc
     2521 ggcagctcat tgccgatttg ttcaggagta acctgcagca tcaggttttt gaccagcatc
     2581 tccttgattt gggcacgcaa atctggctca gacataaacg agcggggatt ttgccgtaaa
     2641 ttgcgtgttc ggtcaaacgt acagaacatt agaacttctc acctcggtca aagcgatccg
     2701 aggacgcatc gcactccaaa gcacttcgtg cgaaatcgac gcggaacgct gcctttgttt
     2761 ggcgtaagct gtaggagtgc gcacgccttt cgcgtcgctt tcgaaaagct aaacctgatc
     2821 ggccttttcg ccgggagtga ctgcagcact cggttgcggt gcggtgacgt tcgaagcatc
     2881 ctggttgtca atccgcgcga cggtcgactc agccggtttc acgtcatgct tggcaacttg
     2941 cgtatcagac tttccagcct tgtgcagttc gtcgttgaac tcgtccttgg ctttttgaaa
     3001 ctccttgacg gcctgaccca ttccccgggc aagctcgggt aatttctttg ctccgaatag
     3061 aacgagaatg atcagcagga tgacgatcaa gtccggccct gccaagttca tgaagctggc
     3121 aagaaagctc atttcaacag ccaacatcag accgtttctc cgagttgcaa ggaatttcaa
     3181 cgaggtagac gagttgcggc ggaggaccgg ttaaggttga caggcagagc actatgggaa
     3241 agcattgcgt cgtatgcgtc ccatctggaa aggcagcatc agcttcggcc tggtttacat
     3301 tccagtggcg gtttattccg ctacgcgaga ggagaagctt agtttccggc agcttcgttc
     3361 cagcgatctc agtccgatca gatacaaaaa agtggcggag gcagactcga aggaagttcc
     3421 agccgaccag atcgtaaaag ggttcgaata cgagcgtggt cattatgttg tgatgaagga
     3481 tgaggatttc gagaaggtgc gcatcgaatc aacccattcg atcgatatca ccgattttgt
     3541 tgatttggag caggtcgatc cgaaattttt ctacaagccg tacttccttg agccgcaaaa
     3601 aggcggggag aaagcttacg cagtcctaca caaggcactc agtggaacgg gcaaaattgg
     3661 tattgccaag gtggtgatca gcaatcgcga acacctggct gccgtaaaac ccgacggctt
     3721 gttcctaatt ttggagctca tgcattttgc cagcgaaatc ctgagcgccg aaatcttgca
     3781 aaacggttcg aacgccgcag tgaccgagaa ggaactgaaa atggcgcagg cgctcatcga
     3841 aagcatgagt gtggtatggg agccggagaa atatcgggat gaataccgaa ctgcgttgat
     3901 ggagatcatc gaacaaaagg cacagcataa ggagattgcg gcaaaagcgc cagctgctcc
     3961 tacgccaacc aatgttgttg atctggtgaa ggtgttgcaa gacagcttaa accggacaca
     4021 agcggtaaaa cagaagcgcc catctgctcg agacggcgct cgccggtcca ctagtacgct
     4081 ggtcaaacag cggcggcgcg caggtgcgct tggctaacat tgctcggttc gcggttgcaa
     4141 attaggaggc tggcattata atcagcgctc tttatggcta agacagcctg gatcaatcgt
     4201 aatgaacgca agcgcacaac ggcgaaaaag tacgctgcgg tgcgcgccga gctaaaggcg
     4261 aaaaaggact acgccggcct ggcgcaactg ccgcgtgacg ctagtcccac gcgcgtggtg
     4321 aaccgctgtg aagtcagcgg ccgccggcgc gctttcattc gccggttcaa gatgtcgcgt
     4381 ctaacctttc gcgaactggc ttcgcaaggg ttgattcctg gcgtaacaaa atcgagctgg
     4441 taaattgtag ccataccggc ttgcgacgcg ttaggcggac gcgtccgtcc agctacagat
     4501 gaactttgta accattccct tggctctggc cccgatcgcc gaaacgatag tgcagcactg
     4561 ggacccgccc atgttgacgt ttggcaaact actggctatt gcggtgctcg tactgctgaa
     4621 cggctttttt gtcgcggccg agtttgcgct cgtcaaagtt cgtaccagcc atctcaacac
     4681 catg
//
LOCUS       DATDAJ010000089         2699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_542805, whole genome shotgun sequence.
ACCESSION   DATDAJ010000089 DATDAJ010000000
VERSION     DATDAJ010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_542805"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..587
                     /locus_tag="VIS53_02150"
     CDS             <1..587
                     /locus_tag="VIS53_02150"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5766617.1"
                     /translation="LRVGNPEQPGIMVGPVIDEPAYRRILEYIETGKKEATLAYQAKE
                     LPPHGYFIPPTIFTDVKPNMRIAREEIFGPVLSVLKVRDLDEAVEVANGTDYALTGGF
                     FSRSPDNIERIKARLEAGNLYINRSCTGAIVGRHPFGGFKMSGSGTKAGGEDYLLNFL
                     VPRVVTENTSRHGFAPEKSPEYRDEFLWPKPRHK"
     gene            complement(604..897)
                     /locus_tag="VIS53_02155"
     CDS             complement(604..897)
                     /locus_tag="VIS53_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766618.1"
                     /translation="MKPRSLSTGGKRRFPQTDYFFHSGFGQWRGHFWSSDGEDRSRFR
                     NLFDLGREYRIEAARERAREMAAFAVIVLTSAWPVVYMIVTVVKLLSKGRPLD"
     gene            1016..>2699
                     /locus_tag="VIS53_02160"
     CDS             1016..>2699
                     /locus_tag="VIS53_02160"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5766619.1"
                     /translation="MKTAVYYAGKSLVKFVFGCVARIQVIGRENAKRAGGFLLASNHI
                     SHFDPFLISLPVGRKIDWMTMAEFFRPPALGILLRSIDAFPAERDRADLKTIRTAIDR
                     LKSGRIVGLFPEGGIRDGVRSLLEGAPLRPGAATLAQIADVPVVPCVILGTDRFYSKK
                     QWLPFRRTPVWIAFGKPISCFPELQKSQARERIESELAAAFKNLYAELREKFCLTTDD
                     LPRSPQERSGTRQDADGDMSVRSKIRRVRTTPVDSLLCASINWLHRRHPLNGHSRQEM
                     ERYLTACERLSPQEYYVLPQEIDGNGTSDSRPTVNGKHDSNMAPLSWRSPIETAFPAN
                     NTARADFFRTNARRWMGAPTVFLLHSLMSSSPTGYYRWAEKFNQLGWNACFVHLPYHF
                     SRVPTGYWNGELAITPDLIRNAEGLRQGVIELRQIMESLREHGCQDFGVLATSYGGWI
                     GALLALVESDFRFVALMSPIVNIEHAIWHSPAARRLRRELVQANIERTLVARHFHLSS
                     PLHGRPVCDPKRILFVTGEFDSIAPPAEIEAIHQAWRGSELLRVRQGHFGHRM"
BASE COUNT          618 a          762 c          733 g          586 t
ORIGIN      
        1 gtctgcgagt cggcaatccc gagcaaccag gcatcatggt cggccccgtt atcgatgaac
       61 ctgcgtaccg gcgcattctg gaatacatcg agaccgggaa aaaagaggct acactcgctt
      121 accaggcaaa ggaactcccg ccgcatggat attttattcc tccgacaatt tttaccgatg
      181 tgaagccgaa tatgcgcatc gcgcgcgaag aaatcttcgg cccagtgcta agcgtcttga
      241 aagtgcgcga tctcgacgag gcggtcgaag tcgcgaatgg aaccgactac gcgctgacgg
      301 gcggcttttt ctcgcgcagc cccgataaca ttgagcgcat caaagcgcga ctggaagctg
      361 gtaatcttta catcaaccgc tcgtgcacgg gcgcgatcgt cggccggcat ccctttggcg
      421 gattcaaaat gagcggcagc ggtaccaagg ccggtggcga agattatctt ctgaactttc
      481 tcgtgccgcg cgtagtgacc gaaaacacga gccgtcacgg cttcgctcca gaaaagtcgc
      541 cggagtatcg cgacgaattt ctctggccaa aaccgcggca taagtagtcg aacagcgaga
      601 cgatcaatcc agcggccgtc ctttgctgag caacttcacg accgtcacaa tcatgtagac
      661 gacgggccat gccgaggtga gaacaatcac ggcgaaagcc gccatctccc ttgctcgttc
      721 ccgcgccgct tcgatacggt attcccgtcc taaatcaaaa agattcctga accgagatct
      781 atcttctccg tcggaagacc agaagtggcc gcgccattga ccgaaaccgg aatgaaaaaa
      841 atagtccgtc tgcggaaagc gtctcttgcc gcccgtggaa agactcctcg gtttcataga
      901 ctctgaccga caactgtttg gaaccagcaa cacaatacca cgttcaaaaa ttcaatcagc
      961 ctgaaaaaat aactttccgg tcgcgcacaa gccgcggcac actcgaaacg cacagatgaa
     1021 aacggccgtg tattacgctg gcaagtcgct agtgaaattc gtgtttggct gtgtcgcgcg
     1081 cattcaggta attggccgag agaatgcaaa gcgcgccggt ggatttttgc tggcgtccaa
     1141 tcacatcagt catttcgatc cgtttctgat ttcgctcccg gtggggcgaa agatcgattg
     1201 gatgaccatg gccgaattct ttcggccacc tgcgctcggt attctcctgc gctcaattga
     1261 cgcattccca gcggagcggg accgggccga tctcaaaaca attcgcactg cgatcgaccg
     1321 gctaaagagc ggacgcatcg tgggcctttt tcctgagggg ggcattcgcg atggtgtgcg
     1381 ctctttactc gaaggcgcgc cactccggcc gggcgcagcc acactggcgc agattgccga
     1441 tgttcccgtc gtgccgtgcg taattctcgg tacggatcgc ttctattcca aaaagcagtg
     1501 gctgccgttc cggcgcacgc cggtgtggat cgcgtttgga aagccgattt cctgttttcc
     1561 agagttgcaa aaatctcagg cgcgcgaacg aatcgaatcc gaactggctg ccgccttcaa
     1621 aaatctttac gctgaattgc gggaaaaatt ttgcctcacg acagacgatc tcccgcggtc
     1681 gccgcaggag cgctctggca cgcgtcagga tgcggatgga gatatgtctg tgcgctccaa
     1741 aattcgccgc gtaagaacga cacctgtcga ttcgcttctt tgcgcatcga tcaattggct
     1801 tcatcgacgc cacccgctga atgggcacag tcgacaagag atggaacgtt accttaccgc
     1861 gtgcgagcgg ctctcaccgc aggaatatta tgtccttccg caagagatcg atggtaacgg
     1921 tacctccgat tcaaggccga cagtgaacgg caaacacgat tcaaatatgg ccccgctgtc
     1981 atggcgcagt ccgatcgaaa ctgcttttcc agcaaacaat accgcgcgcg cggatttctt
     2041 ccgaactaat gcgcggcgtt ggatgggagc gccgacagtg tttttgctgc actccctgat
     2101 gtcatccagt ccgaccggtt actaccgctg ggcagagaaa ttcaaccaac tcggctggaa
     2161 cgcatgtttc gttcatttgc cataccactt ttcgcgtgtc ccgactggtt attggaatgg
     2221 cgagttggcg attacgccgg atctgattcg gaacgcggaa ggactacgcc agggcgtcat
     2281 cgaactgcgg caaataatgg aatcattgcg agaacacggc tgtcaagact ttggggttct
     2341 agccactagt tacggcggat ggattggtgc attgctggca ctagtggaaa gcgatttccg
     2401 atttgtggcg ttaatgtcgc cgatcgtgaa catcgagcat gccatctggc acagcccggc
     2461 agcgcgccgt cttcggcgcg aactggtcca ggcaaacatc gaacgcactc tggttgcgcg
     2521 gcattttcat ctgagctcgc ctttgcacgg ccgtccggta tgcgatccca agcgaattct
     2581 attcgtaacc ggggaattcg attcgattgc tccacctgcg gaaatcgaag cgatccatca
     2641 agcatggcgc gggtcggaac tcttacgcgt gcgacaagga catttcggcc atcgcatga
//
LOCUS       DATDAJ010000090         6275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_550895, whole genome shotgun sequence.
ACCESSION   DATDAJ010000090 DATDAJ010000000
VERSION     DATDAJ010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6275
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_550895"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            485..946
                     /locus_tag="VIS53_02165"
     CDS             485..946
                     /locus_tag="VIS53_02165"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5766620.1"
                     /translation="MDYVIRQLTRQDEPILWEMLYYGLSSAGKNEPPSRDVVRRPEIS
                     RYVEGWGRVGDTGFVAQDKKNRALLGAAWLRRPTDKSDASPELALAVKPEHRRHGIGT
                     ALLTQLVRANPNHSTISVSFVAGKPVLRLYERFGFKVVEQRPDAVVMHRPT"
     gene            complement(985..2127)
                     /locus_tag="VIS53_02170"
     CDS             complement(985..2127)
                     /locus_tag="VIS53_02170"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ionic transporter y4hA"
                     /protein_id="HEY5766621.1"
                     /translation="MSAKTESDADAKTVPSIMRAEFPLLIGFGTAAIFLVVGSDLNEV
                     TTHPFPLLGIFVWLFAVILWSAICVVRHADCLAIKLGEPYGTLILTLSAISIEVVMIS
                     TAMLHGANNPTLGRDAIFAVIMIALNGLVGLSLMLGGLRYREQHYNIQGVNAYLNVIM
                     ALAVLGLVLPNFTTSTSGPTFSTEQQIFFAAVSLLLYAVFLLIQTLRHRGYFLDVKET
                     TTKHSPHHLPRVRSTGFHALMLLLYLAAVIFLAEKFAVPLDNSIEQFHMPQAFGGAVI
                     AALVLSPEGLGGITASLHNQLQRSINILFGSVLATIGLTIPAVLMIGLLTKRPVALGV
                     QGGNLPLLLLTLAVSVVTFTSRKTNILQGCIHFLLFAVFVLLIFAP"
     gene            complement(2511..4250)
                     /locus_tag="VIS53_02175"
     CDS             complement(2511..4250)
                     /locus_tag="VIS53_02175"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY5766622.1"
                     /translation="MHEIPLITTIALALSAALLSGLIARRLGLSPIVGYLIAGVLIGP
                     YTPGVVGDAKIASQLAEIGVILLMFGVGLHFSLKDLLAVRALALPGALAQSTVATFAC
                     MALAVAIGWSWQRGLILGIAVSVASTVVMLRALLDHGIVETAEGRTAIGWLVVQDIIT
                     VLVLVLVPAVAATGGASNIGHTVVIALGKLALLVAIMMLGGARFVPWLLLRVARLRST
                     ELFTLAVLVMAICVATVSYVAFGASMALGAFLGGMVVGQSKVSDQAGADVLPMRNVFA
                     VLFFVSVGMLFDWRAVIAVPGLLIGVLGIILLVTPLLAFLIVIVSGHAMKTALTLAAG
                     LAQIGEFSFIVAEMAKSLALMPATGHNVVVGAAIISIGLNPLIFRWVLALEPRLSKLS
                     WITTRSAKLGARANVIAAERMQEDPGAIVVGYGPVGQTVTRLLAEFGINPVILETNVD
                     VVLELQQHGKQALFGDASRPEILRAARLDAAAYLIVTVPHAEISLRIIQAAREVAPLV
                     RIISRAEYINQSEAFAQAGAAIIRYDEAESAAALAEALLQDIDVPAERIDAIVSKIRN
                     ELAPARRSITNES"
     gene            complement(4290..4460)
                     /locus_tag="VIS53_02180"
     CDS             complement(4290..4460)
                     /locus_tag="VIS53_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766623.1"
                     /translation="MNGVPASRNFPAGFQKPANVDLPYHIARAVLGHSGWFDITDVVS
                     LAAFLNLAPWII"
     gene            complement(4696..4992)
                     /locus_tag="VIS53_02185"
     CDS             complement(4696..4992)
                     /locus_tag="VIS53_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEY5766624.1"
                     /translation="MIRVILPPNLRTLARVEGEVGLELNGTLTQRSLLDAVEAKYPML
                     RGTMRDHVTQLRRPMVRFFACGEDLSHESPDAPLPDAIANGAEPFLVIGAIAGG"
     gene            complement(4989..6173)
                     /locus_tag="VIS53_02190"
     CDS             complement(4989..6173)
                     /locus_tag="VIS53_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HEY5766625.1"
                     /translation="MSRVRVLVGTRKGAFILTSDGARKRWKVSGPHFAGWEIYHMKGS
                     PVNPDRIYASQTSAWFGQIIQCSDDGGKTWNPPGTKPEDLMTPDGMAKGESNMFVYDA
                     SPETGKPLTTHQWYDGTQHPWEFKRVWHLEPSLHDPDHVYAGVEDAALFQSKDGGKSW
                     HEFAGLRGSDTGPKWQPGAGGMCLHTILLDPNNPERMSIAISAAGAFRTDDGGKTWKP
                     INRGLHSQYIPDPNAEVGHCVHRIAMHPSRPNTLFMQKHWDVMRSDDAGGSWHEVSGN
                     LPSDFGFPIDVHAHEPETIYVVPIKSDSEHYPPSGRLRVYRSRTGGNEWEALTKGLPQ
                     RNCYVNVLRDAMSVDSLDPCGIYIGTTGGQVYASVDAGDKWKPIVRDLPAVLSVEAQT
                     LP"
BASE COUNT         1422 a         1827 c         1758 g         1268 t
ORIGIN      
        1 ccccgaatgt tttcggggga gattctttga taactgaaac tctctcatcg tcatgcgacg
       61 atgcttgatt tcagactcag ctcttaaagt tgtatttctt actaccctgt atgtagatgt
      121 caaagaacca gcccttccgt acattcgaga cgacaaaaaa actcaatctt gatcgctatg
      181 ggccgctttt gctgaagcta cggcggttaa gcgggacaaa attgagccaa tttgcagtcc
      241 caaaatgtac gtagaacgca ctccaaagtg aaggagtccc gcttcgcgcg ggacaatcac
      301 actagcaggg agtggatgca cgtcaactct gatttcttga gattgtggtg gacggaaatt
      361 cgcgtcacat cgtgctcgtc cagtgagact tatcgcggac gaagatgatt gcgtcaactt
      421 ggtgagagtt ctgtagtttc gtgtttgcgc gcactggcta tagtaaagcc tgttttccgc
      481 tccgatggat tacgtgattc gccagcttac acgccaggat gaacccattc tttgggagat
      541 gttgtattac ggcttgtcgt ccgccggaaa aaacgagccg ccatctcgtg atgtcgtacg
      601 ccgcccagag atttcccgtt acgtggaagg atggggccgc gtcggcgata cgggatttgt
      661 cgcgcaagac aaaaaaaatc gggctttgct gggtgcagcc tggctccgac gaccgaccga
      721 caaatctgac gcgtcgccgg agcttgcact ggcggtgaaa cctgagcacc gcaggcatgg
      781 catcggcacg gctctgctga cacaattggt ccgcgcaaat cccaatcact caacgatctc
      841 agtcagtttc gtggctggca aaccggtgtt gcgtctctac gagcgatttg gattcaaggt
      901 cgttgaacaa cggccggacg ccgtcgtgat gcacagaccg acataaggat cagcgcgggt
      961 cctctgccgc gaacggcttg tttgttaagg cgcaaaaatc agcagcacga aaacggcgaa
     1021 aagcaggaaa tgaatacatc cttgcaaaat gttggttttc cggctcgtga acgtaaccac
     1081 gctcacagcc agcgttaaga gcagcaaagg cagattgcca ccttgcacac caagggcaac
     1141 cggccgtttc gtcagcaatc cgatcatcag cactgccgga atcgtcagcc cgatcgtggc
     1201 gagcactgac ccgaacaaaa tatttatcga acgctgcagt tggttgtgca gactagcggt
     1261 gatcccgccc agtccttccg gagagagcac cagcgcagcg atgaccgcgc cgccaaatgc
     1321 ctgtggcatg tgaaattgct cgatgctgtt gtccaaggga acggcgaatt tctccgcaag
     1381 gaaaataacg gcagccaggt acaaaagcag cattagtgca tgaaaccccg tggaccgcac
     1441 ccgcggtaaa tgatgcggcg aatgcttggt cgtggtttcc tttacatcca ggaagtagcc
     1501 ccggtgtcgc agcgtctgga tgagcagaaa gaccgcgtaa agcaaaagcg acaccgccgc
     1561 gaaaaaaatt tgctgttcgg tggaaaacgt tgggccgctg gtcgaagtag tgaaatttgg
     1621 taacaccaga ccgagcacag ccagggccat gataacgttg aggtaggcat tgacaccctg
     1681 gatgttgtaa tgctgttcgc gatatcgcag cccgccaagc atcaaagaca gacccacaag
     1741 gccgttgagc gcgatcatga tcacggcgaa gattgcgtcg cgtccgagcg tcggattgtt
     1801 cgcgccgtgt aacatcgccg tggaaatcat taccacctcg atgctgatcg cggagagagt
     1861 gaggatcaaa gttccgtagg gctcgccaag tttgatcgca agacaatcgg catgccgcac
     1921 cacgcatatg gccgaccaaa ggatcacggc aaaaagccag acaaagatgc cgagcagcgg
     1981 gaaaggatgc gtagtgactt cgttcaagtc gcttccgact acgagaaaaa tggcggccgt
     2041 tccaaaccca atgagcagcg gaaattcagc gcgcatgata ctcgggacgg ttttagcatc
     2101 ggcgtctgat tccgtctttg cagacatggg cccgagcata tcgattccgc ctccgcgatg
     2161 caatcggtgc gtacgcgatc tgaaaacgca gggagtcaca ggttcgaacc ttctatcgcg
     2221 caccatctca cgccgctgcg tcgcggaggg gagcaggcca gtgtagcatt ttcggcgtct
     2281 gcgcgaacga gaagagcatt gaatgggctg cgttgcatcg cttcagcaga agcgttgcgc
     2341 atcagaatcg cgtcgtctca atcttcccga tgaaaatgcg gatgggattc ctggttatca
     2401 gcagcgtggc ggttgactgc acaatctgag cgaccgcatt tccattgcgg ccgaagcacc
     2461 gcgaatcgca accggagatg gcagtggccg cgcactggtg gtagccgact tcagctttca
     2521 ttcgttatgc tgcgacgggc cggcgccagt tcattgcgga tcttgctgac gattgcgtcg
     2581 attcgctccg ccggcacgtc gatatcttgc aataacgctt ccgccagcgc agcggcggat
     2641 tccgcttcgt cgtagcggat gatggccgcg ccggcctgcg cgaatgcttc cgattgattg
     2701 atgtattcgg cgcggctgat gatccgcacg agcggcgcca cttcgcgcgc agcttggatg
     2761 atccgcaagc tgatctccgc gtgtggcacc gtcacgatga gataagccgc agcgtcgagc
     2821 cgcgccgcac gcaggatctc cggtcgcgaa gcgtcgccga aaagtgcctg ctttccgtgc
     2881 tgttggagtt ccaggacaac gtcgacattg gtttcgagga tgaccggatt gatcccgaac
     2941 tccgcgagca agcgcgtgac ggtttgcccg acaggcccgt agccgacgac aattgcgccg
     3001 ggatcttcct gcatacgttc ggccgcgatg acgttcgcac gcgcgccgag tttcgcgctg
     3061 cgtgtcgtga tccaagataa tttcgaaagc cgcggctcca gcgcgagcac ccagcggaaa
     3121 atgagaggat tcaggccgat ggagataatg gcagcgccga ctaccacgtt gtgaccggtg
     3181 gctggcatga gggcgaggga ttttgccatc tcggccacga tgaacgaaaa ctcgccgatc
     3241 tgcgcgagac cggccgcgag tgtgagcgct gttttcatcg cgtgcccgct aacgatcaca
     3301 ataaggaagg caagtaatgg cgtcaccaaa agaatgatgc cgagcacgcc gatgagcagc
     3361 cccggcactg cgattaccgc gcgccaatca aacagcatcc cgacagagac gaagaagagc
     3421 acggcaaaga cgttgcgcat cggcagaaca tcagcgccgg cctgatcgct caccttcgat
     3481 tgaccgacga ccatgccgcc gaggaacgcg cccagcgcca tggaagcgcc aaacgccacg
     3541 taagacaccg tcgccacgca gatcgccatc accagcacgg cgagcgtgaa cagctcagtc
     3601 gagcgcagcc ttgccacacg caagagcagc cacggaacga aacgcgcacc gccgagcatc
     3661 atgatcgcga caagcaacgc gagcttccct agcgcaatca caacggtgtg gccgatattc
     3721 gacgcaccac cggtggcagc cacagccggc actagcacta gcacgagcac cgtgatgatg
     3781 tcctgcacca ccagccagcc gatcgcggtt cgtccctcgg ccgtctcgac gatcccgtga
     3841 tcgagtaagg cccgcagcat gacgaccgtg ctcgcgacag agacggcgat gccgagaatc
     3901 aaaccgcgtt gccagctcca ccctatcgcc acggcaagcg ccatgcaggc gaaagtcgcg
     3961 accgtgcttt gcgcgagcgc gccgggtagg gcgagcgcgc gcaccgcgag caggtccttc
     4021 aagctgaagt gcagaccgac gccaaacatc aacaggatca caccgatctc cgcgagttgg
     4081 gacgcgatct tggcgtcgcc gacaaccccc ggcgtgtagg gaccaatcag cacaccggca
     4141 atgagataac caacgattgg cgaaagcccg agccgcctgg cgattaatcc ggagagcaac
     4201 gccgcgctga gcgcgagcgc aatcgttgtg attaaaggaa tctcgtgcat gttcgcagcg
     4261 gctgtcgcca acacttgatc gctcagttgc tagataatcc aaggcgcgag gttgagaaag
     4321 gccgccaggc taacgacatc agtgatatcg aaccatccgg agtgaccaag aactgcacga
     4381 gcaatatggt aaggaagatc gacattggcc ggtttttgaa agcccgccgg aaaattccgc
     4441 gaggctggca cgccattcat cggggccata tgctcgcgac ggctacagag tttttgaaac
     4501 cgctctagcg agtatcgaga ggcttcatca acgcccgatg ggcgaatctc gccccatgat
     4561 ttccgagcgc gaaagtgttt gcgtcaatcg ctgcgacctg gcgttactct ttcttttgag
     4621 caagcgccag gaattccaca cgcgccacct tgccagtcag ccagcgactt tgtttctcgg
     4681 gaccagcctc ccacgctacc cgccagcgat cgctccaata accagaaacg gctcggctcc
     4741 attcgcaatc gcatcaggca gcggcgcatc gggcgattca tgagataaat cttcgccgca
     4801 cgcaaaaaaa cggaccattg gccggcgaag ctgcgtcaca tgatcacgca ttgtcccacg
     4861 cagcatcgga tatttcgctt ccaccgcatc cagcagcgag cgctgagtta gcgttccgtt
     4921 gagttcaagt cctacttcac cttcgacacg cgccaacgta cgcaaattgg gcggaagaat
     4981 cactcgtatc atggcaatgt ttgcgcctct accgacagca ctgctggcaa atcgcgcacg
     5041 atcggcttcc atttgtcgcc ggcatccacg gaggcgtaaa cctggccgcc ggtggttccg
     5101 atataaatgc cgcaaggatc gagcgaatcg accgacatcg cgtcgcgtaa cacgttcacg
     5161 taacaatttc gctgcggcag acctttcgtt agggcttccc attcgttgcc acctgtccgg
     5221 ctgcgataca cgcgcaatct gccgctgggc gggtaatgct cggaatcgct cttgatcggt
     5281 acgacgtaaa tcgtttccgg ctcatgcgca tgcacgtcga tcggaaatcc gaaatcgctt
     5341 ggcaaattgc cactgacctc atgccacgat ccgcccgcgt catcgctgcg catcacgtcc
     5401 cagtgctttt gcatgaacaa cgtgttcggg cgcgacggat gcatcgcgat ccgatgcacg
     5461 caatgaccga cctccgcgtt cgggtccgga atgtattgcg agtgcaaccc gcgattgatc
     5521 ggcttccacg tttttccgcc gtcgtcggtt cgaaacgcgc cagcagccga gattgcgatg
     5581 gacattcgct ccggattgtt cggatcgaga agaatggtgt gcaaacacat tccgcccgcg
     5641 cccggctgcc atttcggacc ggtatcgctg ccccgcagtc ctgcgaattc atgccacgat
     5701 tttccgccgt cttttgattg gaataaggca gcatcttcta cgcccgcgta aacgtgatcg
     5761 ggatcgtgca gcgatggttc caaatgccag acgcgcttga attcccaggg atgctgagtc
     5821 ccgtcgtacc actggtgggt tgtgagcggt ttccccgttt caggcgaagc atcgtaaacg
     5881 aacatattgc tttcgccctt cgccatccca tccggcgtca tcaagtcctc cggctttgtg
     5941 ccgggcggat tccacgtttt gccgccgtca tcggaacact gaatgatttg cccgaaccag
     6001 gcgcttgtct gagacgcgta gatccggtcg ggattaaccg gcgaaccttt catgtgataa
     6061 atttcccaac ccgcgaaatg cgggccgctg actttccatc gtttgcgcgc gccatccgaa
     6121 gtcaggatga acgcgccctt tcttgtgccg actaaaactc tgactctgct cacggttttc
     6181 tcctgttttt gtttgctcga gcgttgttct ctgcgattcg cgctttaagc agcttcttca
     6241 ccaatgcgac cggcatcggt ttgtctggag agaag
//
LOCUS       DATDAJ010000091         7519 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_559478, whole genome shotgun sequence.
ACCESSION   DATDAJ010000091 DATDAJ010000000
VERSION     DATDAJ010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7519
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_559478"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1938
                     /locus_tag="VIS53_02195"
     CDS             <1..1938
                     /locus_tag="VIS53_02195"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY5766626.1"
                     /translation="GHASIQGSTDIPTLYDILPGYLAMPRGGAEETLQRYLDTNTTKT
                     GLWSNTPAYFVSLLKAYYGKHATVENDFGYNWLPKITADHSFFEYLYEMADGKMEGMF
                     LIGQNSAVGAPNSRFQRKSMAKLKWFVIRDMVETEPARFWHDSAEIERGELKTEEIET
                     EVFFFPAAGYAEKEGAFTNTQRLLQWREKAVDPPGDSRSDAWFIHQLAMRLIAKARAS
                     NDPMDEPLRALDWWYPEDELGEPKMEAVLAEINGWKTQPVAEGADAGGADGILFGGVD
                     RQGNAHHGPQVADYNELKADGSTACGCWIYSGVFNRDGVNKANARKPKDYLGHGWGFS
                     WPSDRRIIYNRASAKPNGEPWSERKKLVWWESEKWAGIDVPDFKANKAPDYRPRADQT
                     GLDGQRGDAPFILHEDGLGWMYVPKGLQDGPFPTHYEPLESPLRNPLYSRDTNPVVNW
                     FTRAENRFAPPGDSRFPFVLTTYRLTEHHTGGGMSRFLSHLSELQPEMFVEISLELAT
                     KLKVNNSDYVCIVSLRGAIEARALVSRRIRPMKLNGKTVHQVAVPFHFGAAGPLRGNA
                     ANNLVAISGEPNVTIMESKALLCNIIPGRLPRGPDFLAWIERYAPQSGQPPNLHPEQP
                     PPGAPSGGKFSRSHGKEGKTG"
     gene            1935..2804
                     /locus_tag="VIS53_02200"
     CDS             1935..2804
                     /locus_tag="VIS53_02200"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY5766627.1"
                     /translation="MIGEGTQSTNQRRHNYVQENVEVGFFTDPTVCIGCKACEVACKE
                     WNEVPDDGFTWYGNSYDNTGHLGASTWRHVLFLEQDRQKGNQVVGSHSLGNGDGEDPF
                     RWVFLSDVCKHCEEAGCLEACPTGSIVRTEVGSVFVQDDVCNGCGYCVVSCPFGVIDR
                     RPQPLPDAGGAFKCTFCYDRQKSGLTPACAKVCPTESIVFGRLDDLRARATQRVTQLR
                     EHGYNDAQLYDPMETSVRGIHAFFLILGEPEAYGLPPKPQVPTIHLKAAWTVAFATAI
                     GAIAVTLASFAFL"
     gene            2992..3960
                     /gene="nrfD"
                     /locus_tag="VIS53_02205"
     CDS             2992..3960
                     /gene="nrfD"
                     /locus_tag="VIS53_02205"
                     /inference="COORDINATES: protein motif:HMM:NF025940.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEY5766628.1"
                     /translation="MNESRLDKLRDDAWQRGAVTGRGVDVAGGPIPRKPGYYGQPVVR
                     PPVWTWEIPIYFFVGGLGGMSAVIALGALLFHDLDLTRTAMCVAGIASVLSTILLILD
                     LGRPHLFINMLRVFKPQSVMSMGAWILTAFGMCVVPGLIALELQAFHPFAGAIDQILG
                     IAAGILVFGSAIFGVLLATYTGVLIGATAIPAWFLHHKLLPVHFGTAGLGSAAALLEL
                     LGYRIAPFNAIGFFAAAVESVLLVWLSIDKHGVADRAIHEHRLGWLIRIGGILTGPFP
                     LVLRFFGAIPLAAISFLLGALVSRFGWLAVGKISARDPESVFASQK"
     gene            complement(4005..4805)
                     /gene="fdhD"
                     /locus_tag="VIS53_02210"
     CDS             complement(4005..4805)
                     /gene="fdhD"
                     /locus_tag="VIS53_02210"
                     /inference="COORDINATES: protein motif:HMM:NF001943.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEY5766629.1"
                     /translation="MKESGIGSQKIIRRKRDGELEYLPDDLTIEEPLEIRVGRKTIAT
                     TMRTPGHDEELAAGFLLSEGIVHGRDQIVSISRNTEDRVVVELADGVKLKLNSTKRFG
                     TISSSCGLCGKTNIDAIRQNFPAVRSTDIRIDIETLLSLPETLRNAQSDFARTGGIHA
                     AGIFGVDGKLKIAREDIGRHNAVDKAVGRAFLDELLPLERHLLLVSGRASFEIIQKAL
                     AVGIPIVAAVSAPSSLAVEFARDTNQTLIGFLRPPSFNIYTHIDRVIL"
     gene            4832..5341
                     /locus_tag="VIS53_02215"
     CDS             4832..5341
                     /locus_tag="VIS53_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosysynthesis protein"
                     /protein_id="HEY5766630.1"
                     /translation="MAAMEICHLFISTGHNFVGHHGREPDTHPMIETSEIECIAGRGI
                     RGDRYFDFKDDYKGQITFFSLEVFDELCSAMQIQPCSPSLARRNVITRAVNLNELIGQ
                     EFELQGVRFLGMEECRPCYWMDGAFAPGAQEFLKGRGGLRAKILTDGKLCSMKLSSRA
                     KSRDPAKLV"
     gene            5448..5993
                     /locus_tag="VIS53_02220"
     CDS             5448..5993
                     /locus_tag="VIS53_02220"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEY5766631.1"
                     /translation="MGGESRRMGTDKATFVFRGSALWQNQVELLRKLKPVEIFISART
                     DPKWRPHDVTFVADVAPSRGPLSGLAAAVNRMSTSHLLALAIDMPWMSSEYLESLCAQ
                     MEPGRGVLPKIGDRAESLAAIYPQEAAIETAKALAGTDFSLQSLACDLIAVGKLRAIP
                     VTQREEKFFQNINEFADLESH"
     gene            6097..6909
                     /locus_tag="VIS53_02225"
     CDS             6097..6909
                     /locus_tag="VIS53_02225"
                     /inference="COORDINATES: protein motif:HMM:NF013357.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 25 protein"
                     /protein_id="HEY5766632.1"
                     /translation="MRSSILRVAVLFSALPVCAFSATNVVNLSHYDMMRPDFATMKRQ
                     GIVGVIHEATYPPLVRDAKYLDRQMGALQAGLLWGAYHYGNGSDPIRQADHFLSVVSN
                     AWAQADSAVRPSSGVLLVLDFEKNGHYPGGTMRAEQAVAFVERIRSRTGVYPGIYSGE
                     YHLGQVLNSARVTPAQRKTLTNCWLWIANYSKQPRATAPWNYWALWQYTGDGKCGLPR
                     SSHPISIANIRKAELNIFRGSRNDLEDFWQRRAWNPSGGAPRRESGTLTAEL"
     gene            complement(6944..>7519)
                     /locus_tag="VIS53_02230"
     CDS             complement(6944..>7519)
                     /locus_tag="VIS53_02230"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 family protein"
                     /protein_id="HEY5766633.1"
                     /translation="WLPKLSHPIRIGEHNQTAFALGLLLDCAQAKNDERLAKLAADSA
                     RKFYLADKNCPLTYEPSGEDFLSPCLAEADVMRRVLTQVDFAKWLGQFLPQIPRTATA
                     DWLPVAISPDPSDPKLAHLDGLNLSRAWMLEGILSSLPADDPRRPALASAAETHRRAG
                     LAAVTGEHYEGGHWLGSFAVYLTTQRGKIEK"
BASE COUNT         1627 a         1986 c         2161 g         1745 t
ORIGIN      
        1 ggtcacgcct cgatccaggg ctcgaccgat atccccacgc tctatgacat tttgcctggt
       61 tatctggcga tgccgcgcgg cggtgctgag gagacgttgc aaagatatct cgacacaaac
      121 acgaccaaga ccgggctctg gtcgaatacg cccgcgtatt tcgtgagctt gttaaaagcc
      181 tattacggca aacacgcgac cgtagaaaac gatttcggtt acaactggct gccgaaaatt
      241 accgcggacc attcgttctt cgaatatctc tacgagatgg cggacgggaa aatggaaggc
      301 atgttcttga ttggacagaa ttctgctgtc ggcgcgccga actcgcgttt tcaacggaag
      361 tcgatggcga aactaaaatg gtttgtcatt cgcgacatgg tggaaaccga gccagccaga
      421 ttttggcacg actctgcgga aattgagcgc ggcgaattga aaacggaaga gatcgagacg
      481 gaagttttct tctttcccgc ggctggttat gcggaaaaag aaggcgcgtt cacgaacacg
      541 cagcgtcttt tgcaatggcg cgagaaagca gtcgatccac cgggtgattc tcggtcggac
      601 gcgtggttca ttcatcaatt ggcgatgagg ttgatcgcta aagccagggc ctccaatgat
      661 ccgatggacg aaccgctgcg cgcgctcgac tggtggtatc cggaggacga acttggcgag
      721 ccgaaaatgg aggcagtgct tgctgagatc aatggctgga agacgcaacc tgtagccgag
      781 ggcgctgacg ccggtggtgc agacggcatt ctctttggtg gcgttgatcg acaaggcaat
      841 gcccaccacg gtccgcaagt agcagattat aacgaattga aagcggacgg atccaccgcc
      901 tgcggttgct ggatttactc gggcgttttc aatcgagacg gcgtgaacaa agcgaacgcg
      961 cgaaagccga aggattatct tggacacggc tggggcttca gttggccgag cgatcgccgt
     1021 atcatctaca atcgcgcaag cgcgaagccg aatggtgagc cgtggagcga acggaagaag
     1081 cttgtctggt gggaatcgga aaagtgggct ggcatcgacg ttcctgactt caaggcaaac
     1141 aaagctcccg attatcgacc gcgagcggac cagaccggtc ttgacggtca acgtggcgac
     1201 gcgccattca tcttgcacga agatggtttg ggctggatgt acgttccgaa aggtttacag
     1261 gacggcccat ttccgacgca ctacgagccg ttggaatcgc ccctgcgcaa tccgctctat
     1321 tcgcgcgaca ccaacccggt tgtcaattgg ttcacgcgtg ctgaaaaccg tttcgcgcca
     1381 ccaggcgatt cgcggtttcc gtttgttctc accacttacc gcttgaccga gcaccatacc
     1441 ggcggcggca tgtcgcgctt tctcagccat ctttccgaat tgcagccgga gatgtttgtg
     1501 gaaatttcac tcgagctcgc gaccaagctt aaggtcaaca atagcgatta cgtttgcatt
     1561 gtgagcttac gcggggcgat cgaggcccgc gctcttgtta gtcgccgcat caggccgatg
     1621 aagctcaacg gtaaaaccgt gcatcaggtt gcggtcccat ttcattttgg agccgccggc
     1681 ccgttgcgcg gcaacgccgc caataatctc gttgccattt ccggggagcc gaatgtcacg
     1741 atcatggaga gcaaggctct tctttgcaac ataatccctg gtcgtttgcc acgcggacca
     1801 gattttctcg cttggatcga acgctacgcc ccgcaatccg gccagccacc aaatttacat
     1861 cctgaacaac cgccgcccgg tgcaccaagc ggtggaaagt tttcgcgcag tcacggcaaa
     1921 gaaggcaaga caggatgatc ggcgaaggaa cccagagtac gaatcagcgc cggcacaatt
     1981 atgtgcagga aaatgttgaa gtagggtttt tcactgatcc gaccgtatgc ataggctgca
     2041 aagcctgcga agtcgcgtgc aaagaatgga acgaagtgcc tgatgacggc ttcacgtggt
     2101 acgggaattc gtacgacaac acgggacatc tcggcgcctc cacctggcga catgttctgt
     2161 ttcttgagca ggaccgacaa aagggaaatc aggtcgtcgg ttctcactcg ttaggcaacg
     2221 gcgatggaga ggatccattc cgctgggttt ttctttccga tgtttgcaag cactgcgagg
     2281 aagcgggttg cctcgaagcg tgtcctaccg gctcaatcgt gcgaactgaa gtcggttctg
     2341 tctttgtgca ggacgacgtt tgcaatggct gcgggtattg cgtggtttca tgcccttttg
     2401 gcgtgattga tcggcgcccc cagcctttgc ccgacgccgg cggtgcattc aaatgcacct
     2461 tctgctacga ccgacaaaag agcggcctca caccggcgtg cgcgaaagtt tgtccgactg
     2521 aatcgatcgt gttcggccgg ctcgacgact tgcgggcccg cgcgacgcaa cgcgtgacgc
     2581 agttgcgaga acacggctac aacgatgcac agctttacga tccgatggaa acgtcagtac
     2641 gcggcattca cgcgtttttc ctgattctcg gcgagcccga agcatacggc cttccgccaa
     2701 agccacaggt tccgacaatt catctgaagg ccgcgtggac ggttgcattt gcgactgcca
     2761 tcggtgcaat cgcggtaacg ctcgcaagct ttgccttttt atgagcgggc ggtcgataac
     2821 tctggggagc gcacgcattc tgcgtgctag cgaaggcatt ttgccttcac gaacttacgg
     2881 gcagcgatcg agcaccattg ttgcagcgtc gaataaatgc cgctgcggtc cgagttcgtc
     2941 gccgcagaat gcggcgacca gcacgctaca agcgtgcgat gcccaatttt tatgaacgaa
     3001 tcgcgtctgg acaagttgcg cgatgacgcg tggcaacgag gcgcagttac cggccgcggt
     3061 gtggacgtcg ccggcggtcc gatcccgcgg aagccgggtt actatggtca gccagttgtc
     3121 aggccgccgg tgtggacatg ggagattcca atttactttt ttgtaggcgg cctcggcgga
     3181 atgtcagcgg tgatcgcgct tggcgcgctg ctatttcacg acttggatct tacgcggacg
     3241 gcaatgtgcg tcgctgggat tgcatcggtg ctctcgacga ttctgctaat tttggattta
     3301 ggccggccgc atcttttcat caacatgcta cgagtattca aaccgcaatc ggttatgtcg
     3361 atgggcgcgt ggatattgac cgctttcgga atgtgtgtcg ttccaggttt gatcgcgctg
     3421 gaacttcagg cattccatcc atttgctggc gcaattgatc aaattctcgg catcgccgca
     3481 ggaatcttgg tttttggttc agcgatcttc ggagttttgt tagcgacata tacaggtgtg
     3541 ctcatcggcg cgacggcgat accggcctgg tttttgcatc acaagctgct gccggttcat
     3601 ttcggaacgg cgggattagg atccgctgct gcgctcctgg aattgctcgg ttaccgaatc
     3661 gcgccgttca acgcgatcgg gttttttgct gctgcggtcg aaagcgtgct cttagtttgg
     3721 ctgagcatcg ataaacatgg agtcgccgat cgggctatcc acgagcatcg tttgggctgg
     3781 ctcattcgga tcgggggaat cttaaccggc cccttccctc ttgtgctgcg attcttcggc
     3841 gcgatcccgt tggcggcgat ttcattttta ctgggcgcgc tcgttagccg tttcggttgg
     3901 cttgcggtag gaaaaatttc ggctcgggac ccggaatcgg ttttcgcctc acagaagtaa
     3961 cacagacttc cagcctgtct gacgaatcag gcaggatgcc tgagttacaa gatcacgcgg
     4021 tcaatatgcg tgtaaatgtt gaaggatggc gggcgcaaaa aacctataag cgtctggttg
     4081 gtgtcgcgcg cgaactcgac cgcaagactt gaaggcgctg acacagcggc cacgatcgga
     4141 attccgacgg cgagcgcctt ttgtatgatt tcaaacgacg cgcggccact gactagaaga
     4201 agatgtctct ccaatggtag cagctcgtcg agaaacgcgc gtccgactgc cttgtccact
     4261 gcgttgtggc ggccgatatc ttcgcgcgca attttcaatt tgccatccac gccgaaaatt
     4321 ccggcggcat gaattccgcc tgtgcgcgcg aaatcgcttt gggcgttgcg caatgtctcg
     4381 ggaagcgaca gcagcgtttc aatatcaatc cggatatctg tcgatcgtac cgcagggaaa
     4441 ttttgccgga tcgcgtcgat gtttgttttg ccgcacagac cacaactact ggaaatcgtt
     4501 ccgaaacgtt tcgtcgaatt cagttttaat ttcacgccgt ctgcaagctc cacaaccact
     4561 ctatcctcgg tgttccttga aatgctcacg atctgatcgc gaccgtgcac gataccctcg
     4621 gaaagtaaga acccagctgc gagttcttca tcgtgaccgg gcgtgcgcat tgtagtggcg
     4681 atggttttgc gtccgacgcg gatttccagc ggctcctcga tcgttaggtc gtccggcaag
     4741 tactcgagct caccatcgcg ttttcgccga atgattttct gtgatccgat gccgctttct
     4801 ttcatgtgaa ttgaggcgcc tcaatggtag catggctgcg atggaaattt gtcatctatt
     4861 catttccacg ggacacaatt ttgttggcca tcacggccgc gaacccgaca cgcatccgat
     4921 gattgaaacg tccgaaatag aatgcattgc tgggcgtggt attcgcggtg atcggtactt
     4981 cgatttcaaa gacgattaca aaggtcagat cactttcttt tcgctggaag ttttcgatga
     5041 actttgtagc gcgatgcaaa ttcagccctg ctcgccttct ctggcacgac gcaacgtgat
     5101 cacacgcgcg gtcaatctga acgagttgat tggacaggag ttcgagctgc aaggcgttcg
     5161 ttttctcgga atggaagagt gccggccatg ctattggatg gatggcgcat ttgcaccggg
     5221 tgcccaggaa tttctgaaag gccgcggcgg tctgcgggcc aaaattctga cagatgggaa
     5281 attgtgttcg atgaaattgt catcccgagc gaagtcgagg gatcccgcaa aattagtttg
     5341 aggtaatgcc gcgggatgga aagcctggcc tcgcggactc cgtccgctgc gttgcagcct
     5401 cgagtccgct tcgctccatt cggaatgtcc taagtgcggt tctcctcgtg ggcggggagt
     5461 cgcgccggat gggcacggat aaagcaacat ttgtgtttcg cggaagtgcg ctttggcaaa
     5521 atcaagtcga actgctgcgt aagctgaaac cagtcgagat ttttatttcg gcgaggactg
     5581 atcctaaatg gcgtccgcac gacgtgacgt tcgtcgcgga tgttgcacca tcacgcgggc
     5641 cgctcagcgg tctcgccgca gccgtgaacc gaatgagcac gagtcatctg ctggcgctcg
     5701 caatcgatat gccgtggatg agcagcgaat accttgagtc tctttgcgct cagatggagc
     5761 ccggtcgtgg tgtgctacca aagatcggtg atcgcgccga atcactggcg gcaatttatc
     5821 cgcaagaggc tgcgattgaa acagccaagg cattggcagg cacggatttt tcgctgcaat
     5881 ctctggcctg tgatttgatc gcggttggaa aactccgggc catacccgtt acacagcggg
     5941 aggaaaagtt ctttcaaaat ataaacgagt ttgccgatct ggagtcacac tgagccttgt
     6001 agcgaaggcg atgcgcaaaa aattgcggaa accaaattct tccccttgca aattcgccag
     6061 gactgcccaa tgtgtgccgt gcgattttcc atgggcatga gatcgtcgat cttgcgggtt
     6121 gcagttttgt tttctgcgct tccggtctgc gctttttcag caacgaacgt agtgaatctt
     6181 tcccactacg acatgatgcg tcccgatttc gctacaatga aacgtcaggg catcgtgggt
     6241 gtaattcacg aagcgacgta tccgcccttg gttcgcgatg caaaatattt ggatcggcaa
     6301 atgggggcgc tacaagcggg actgctctgg ggagcatatc actacggcaa cggcagtgac
     6361 ccaattcggc aggctgatca tttcttaagt gttgtctcca atgcctgggc acaagcggat
     6421 tccgcagtgc gaccaagctc aggtgtcctg ctcgtgctcg atttcgaaaa gaatggtcat
     6481 tatccaggcg gaacgatgcg cgccgaacaa gctgtcgcgt ttgtcgaacg cattcgctca
     6541 cgcaccggtg tatatccggg tatttattcg ggcgaatacc atctcgggca ggttttgaat
     6601 agcgcgcgag taactcctgc acagagaaaa acgctcacca attgctggct ctggattgca
     6661 aattactcga aacagccgcg tgcaacggcg ccgtggaatt actgggctct gtggcaatac
     6721 accggggacg gtaaatgcgg cttgccgcgt tcttctcacc ccataagtat cgccaatatt
     6781 agaaaagcag agctcaacat ttttcgaggc agccgaaacg atctggagga tttctggcag
     6841 cgacgcgctt ggaacccgtc gggaggagcg cctcgccgag aatcaggaac gctgacggcc
     6901 gagctgtaat aaacgcatag tcgtcgcggg aaacggcagc ttgtcatttc tcaatttttc
     6961 cgcgctgcgt cgtgagataa accgcaaagc tgccgagcca atggccgccc tcgtaatgtt
     7021 cgccggtcac tgccgcgagc ccagcgcgcc gatgcgtttc tgctgcgctc gcgagcgctg
     7081 gacggcgtgg atcatcagca ggaagagaag agagaatgcc ttccagcatc cacgctcgac
     7141 ttaaatttaa tccgtcgaga tgcgccaact ttggatcact cggatcgggt gaaatcgcca
     7201 ccggcaacca atccgccgtc gccgttctgg gaatttgagg caggaattgg ccgagccatt
     7261 tcgcgaagtc aacttgcgtc aagacgcgac gcatgacgtc ggcttcggcg agacaaggcg
     7321 agagaaaatc ttcgcccgag ggctcgtacg tgagcggaca attcttatcc gccagataaa
     7381 atttgcgcgc tgaatcagcg gccagtttag cgaggcgttc gtcatttttt gcctgcgcac
     7441 aatcgagaag cagcccaagt gcgaacgcgg tttgattgtg ctcaccgatg cgtattgggt
     7501 gcgacagttt cggtagcca
//
LOCUS       DATDAJ010000092         2235 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_567473, whole genome shotgun sequence.
ACCESSION   DATDAJ010000092 DATDAJ010000000
VERSION     DATDAJ010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_567473"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..609)
                     /locus_tag="VIS53_02235"
     CDS             complement(<1..609)
                     /locus_tag="VIS53_02235"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY5766634.1"
                     /translation="MPVVLVERESPQISVVTLNRPERRNALTLELLTELCAVINVASE
                     QPEQRVLIFRGAGAAFCTGLDLKEAADTTQAHATAEMVANTLVAISQTRLVTIAAVHG
                     AAVAGGAGIMSACDFVVAAERTKIGYPEVRRGLVAGLVMTFLRRQIGERNMRELLFSG
                     ELIDAARAKEIGLVNRVVAPEDVMNEARKFAASVLQGAPDALA"
     gene            complement(667..>2235)
                     /locus_tag="VIS53_02240"
     CDS             complement(667..>2235)
                     /locus_tag="VIS53_02240"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013225.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEY5766635.1"
                     /translation="REGGGKAGYERQRKMDRLSVRERLRHLLDKDSPFFEVGLWAAYK
                     MYEQWGKIPAAGVVTGIGNVEGVSCMIVANDATVKAGAFFPATTKKVIRAQRIAFECA
                     LPLVYLVDSAGVFLPMQDEIFPDEDDFGRIFRNNSVISAAGIAQFAAIMGNCVAGGAY
                     LPVLCDKILMTQGSGLYLAGPSLVKAAIGQIVDAEELGGAKMHSEISGTVDFFEKDDP
                     SCLKRVRSLVALLPEATSRGAQTASPARTGRALPKPAKNPDSVYDLISFDGRNNYDAR
                     DLLAMVIDENSLDEYKADYGKTLVTAYARINGRPVGIVANQRVQVRTKKEGIQMGGVI
                     YADSADKAARFIMDCNQTNLPIIFFQDVSGFMVGRDAEESGIIRSGAKLVNAVSNSVV
                     PKITVIVGGSFGAGNYAMCGKAYDPRFIVAWPNARYAVMGAAQASDTVFSILAKARER
                     GDKKASPEELEDLRAKVKQSYEEQTDIRYGAARGWVDAIIQPHETRDVLIRLLEYVSR
                     PMPKAHFHTGVIQT"
BASE COUNT          474 a          688 c          570 g          503 t
ORIGIN      
        1 cgccagcgcg tccggtgcgc cttgcagaac cgacgcagcg aattttcttg cttcattcat
       61 cacgtcttct ggggcaacga cgcgattcac caatccgatt tccttcgcgc gcgcggcgtc
      121 gattaattct ccgctaaaca atagctcgcg catgtttcgt tcgccgatct ggcggcgcag
      181 aaatgtcata accaatccgg caacgagtcc gcggcgcact tcggggtagc cgattttggt
      241 tctctctgct gcgacaacaa aatcgcacgc ggacattatc cctgcgccac ccgcgaccgc
      301 agcgccgtga actgctgcaa tcgtgacgag ccgcgtttgg ctgatcgcaa ccaacgtatt
      361 cgccaccatt tcggcggtcg catgcgcttg tgtggtatcg gcggcttcct tcaaatccaa
      421 tccggtgcaa aacgccgcgc ctgctcctcg aaaaattaga acgcgctgct ccggttgctc
      481 cgacgcgacg ttaatgaccg cacataattc agttaacagc tcgagagtaa gcgcgttccg
      541 ccgctcaggc cggttcaggg tcacgacgct tatctgcggc gattctcttt cgactaaaac
      601 aacaggcatt ggagaagtta catcgtgaat cgttcaatcg ctgaatcgtt aaaccgctaa
      661 ataccgctac gtttggatga ctccggtgtg gaaatgcgct ttcggcattg gacgcgagac
      721 gtattccaag aggcgaatca gcacgtcacg cgtttcgtgg ggttgaatga tagcgtccac
      781 ccagccgcgc gcggcgccgt agcgaatatc ggtttgctct tcgtaactct gtttcacttt
      841 cgcgcgaagg tcctccagtt cttcgggcga cgcttttttg tcgccgcgct cgcgcgcctt
      901 ggcgagaatc gaaaaaactg tgtccgacgc ttgcgcggcg cccatcaccg cataacgcgc
      961 gttcggccag gcaacgataa accgcggatc atacgccttg ccgcacattg cgtaattgcc
     1021 cgcgccaaat gatcccccaa cgattacggt gatcttcggc acaacggaat tgcttaccgc
     1081 gttcaccagt ttggcgccgc tgcgaatgat tccgctttct tctgcgtcgc gaccgaccat
     1141 gaatccgctg acgtcctgga aaaaaatgat cggcagattc gtctgattac agtccatgat
     1201 aaagcgcgct gctttgtccg cgctgtcggc ataaatgacg ccccccatct ggattccttc
     1261 ctttttcgtc ctgacctgca cgcgttggtt ggcaacaatt cccacgggcc ggccattgat
     1321 gcgggcataa gccgtcacga gcgttttgcc ataatcggcc ttgtattcgt cgagtgaatt
     1381 ttcgtcgatg accatggcca gcaagtcgcg cgcatcgtaa ttgttccgcc catcgaaact
     1441 gatcagatcg taaacgctgt ccggattctt tgccggcttt ggtagggcgc gaccggtccg
     1501 agccggactg gcagtttgcg cgccgcgcga agttgcttcg ggtaacaacg cgactaacga
     1561 acgaacacgc ttgaggcacg acggatcatc cttttcgaaa aagtccactg tgccgctgat
     1621 ctccgaatgc attttcgcgc cgcccaattc ttccgcatcg acaatctgac cgatggccgc
     1681 tttgaccaaa gatggccctg cgagataaag cccgcttcct tgcgtcatca aaattttgtc
     1741 gcacaacacc ggcagatacg caccgccagc tacgcagttg cccatgatcg ccgcaaactg
     1801 cgcgatgcct gctgctgaaa tcaccgagtt attgcgaaag atccggccga aatcatcttc
     1861 atcgggaaaa atttcatcct gcatcggcag gaacacgccc gccgaatcga cgaggtaaac
     1921 gagcgggagc gcacattcga acgcgatccg ctgcgcgcga attacctttt tggtcgtagc
     1981 cggaaaaaac gcgccggctt tcacggttgc gtcattggcc acgatcatac acgaaacgcc
     2041 ctcgacattg ccgatgcctg tcacgacccc cgctgcggga attttccccc attgctcata
     2101 cattttgtaa gcagcccaga gcccgacttc gaaaaacggc gagtctttat cgagcaaatg
     2161 acgaagccgc tcgcgtacag acaaccggtc catcttacgc tggcgctcgt agccagcctt
     2221 gccgccgcct tcacg
//
LOCUS       DATDAJ010000093         3307 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_570357, whole genome shotgun sequence.
ACCESSION   DATDAJ010000093 DATDAJ010000000
VERSION     DATDAJ010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_570357"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="VIS53_02245"
     CDS             complement(<1..584)
                     /locus_tag="VIS53_02245"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5766636.1"
                     /translation="MRILVTGGCGFIGSNFIRYILQHYKPAYVTNVDVLTYAGNIANL
                     EGVVEEHGERYEFFKADIANADLMDALMTEHQFYAVINFAAESHVDRSINDPLNFIHT
                     NVIGTSVLLECARRHGVQRFVQISTDEVYGSLGAAGRFTEQSPLDPSSPYSSSKAGAD
                     LLALASHKTYGQDVVVTRCSNNYGPYQFPEKLIPL"
     gene            583..2241
                     /locus_tag="VIS53_02250"
     CDS             583..2241
                     /locus_tag="VIS53_02250"
                     /inference="COORDINATES: protein motif:HMM:TIGR03663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase activity-associated protein Agl23"
                     /protein_id="HEY5766637.1"
                     /translation="MAARTSSAERDALVESAPAKARVGDYLQQWKVRFAGTDWVPWLI
                     LALAGLLRFFLLGIKPPHFDEGINGWFVDQVMKNGFYRYDPTNYHGPLHFYVLLLFES
                     LFGRNVWALRLPIVLVSIACVWLALKFEPLVGRNVSRIAALAMAVSPGFVFYGRYAIH
                     EVWLQFFSMAFILGLLGLWRRGTLTYLRYAGVGLIGMILTKETYAIHVACALLAIPTL
                     AVSYWLSRVPEAKPAKQTWSWIDLGMIVIVGGFAIVFFYSGTFFNWGGVKGLYLAFKA
                     WTETGASGHGHEKAWDYWLKIMGPSLEMGRADFFGYELPMLVGLTLCLFCQKFKNLNL
                     RYLAIYGAGSFVAYSLVKYKTPWCVISFGWPLLYVFGGAILLVRQKHLRFAQRTIGVL
                     LSISLASSIWLNYFRCSSPDEPYAYVQTYNDMFKLTKPLLTMAKRDPSNYHLTGHLIR
                     SSIYPLPWVLGDFDRVGYYEGGNMPGNLDGDFLLVQQDKIKDVESKLKGTYYTDMMTL
                     RNYQDPSKIFFSAKVFKDLFPGKAPDFDGNAPKPSPSPSPANVP"
     gene            2238..>3307
                     /locus_tag="VIS53_02255"
     CDS             2238..>3307
                     /locus_tag="VIS53_02255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766638.1"
                     /translation="MKWVTAGVTFVNLSVVCGVLLGLVGRGLNAVSAAVALVCGAAFA
                     IAAFLGTRDSAVRQKSAIDPATKQKARKPSGTEDMTVAIPSALMRYRSVWFWAVAVCF
                     AVFAVRSFCWLLYIDSSELKIQSPNNLGDLSLHLTLINNFANGVALWPDNPIFVHSKL
                     RYPAGIDLFNALLSLVHIDLLIGLVWVGLLASLAIFYGFYRWGGTFAVAGFLFNGGIA
                     GFQFLKTFKFLDYQGAAADIAKKPIAWKSIALSMLVTQRGWLYAIPAGLVLLWHWREK
                     FFTQSPVAVVADPGQPADAVKSEPAAVNAHGYRKGPLPWWVELSIYASMPLFHLHTFI
                     ALTIVLVVGLFFERATEIKFII"
BASE COUNT          685 a          863 c          904 g          855 t
ORIGIN      
        1 agtggaatta atttttccgg aaattgatac ggaccgtaat tattcgagca tcgggtcacc
       61 accacgtcct ggccgtacgt cttatgagac gcgagcgcaa gaaggtcggc gccggctttg
      121 cttgaggaat acggcgaact gggatcgagc ggcgattgct ccgtgaatct gcccgcagcc
      181 ccaagcgacc catatacctc gtccgtcgag atttggacaa atcgctggac gccgtggcgg
      241 cgcgcacatt ctaatagcac acttgtgcca atgacgtttg tatgaatgaa gttgagcgga
      301 tcattgatgc tgcggtccac atgcgattct gccgcgaaat tgatcaccgc atagaactgg
      361 tgctcggtca tcaatgcgtc catcaaatcc gcattggcaa tatcggcttt gaaaaattcg
      421 taacgctcgc catgttcttc gaccacccct tcaagattgg cgatgttacc ggcataagtg
      481 agtacatcga cattagtgac gtatgcgggc ttgtaatgtt gcaaaatata ccgaataaag
      541 ttgctcccga tgaatccgca gccaccggtg acaaggatgc gcatggcagc gcgtactagc
      601 agtgccgagc gcgacgcgct agtagaatct gctcccgcta aagcgcgagt gggcgattac
      661 ctccagcagt ggaaggttcg tttcgcggga acggactggg tgccgtggtt gatcctcgcg
      721 ctggcagggc tcctacggtt tttcctcctc ggtatcaagc caccgcactt cgacgagggc
      781 atcaacgggt ggttcgtcga tcaggtgatg aagaacgggt tttaccgtta cgacccaacg
      841 aattatcacg gtccgcttca tttttatgtt cttttgctgt ttgaaagctt gtttggacgc
      901 aacgtgtggg cactgcgttt gcctatcgtg ctggtaagca tcgcttgtgt atggcttgcg
      961 ttgaagttcg agcctctggt tggacgaaac gtgagccgaa tcgccgcatt ggccatggca
     1021 gtctcgcccg ggttcgtttt ctacgggcgc tacgccatcc acgaagtgtg gctgcaattc
     1081 ttctcgatgg ctttcatttt ggggctgctc ggtttgtgga ggcgcggcac gctgacctac
     1141 ttgcggtacg ccggcgtggg gttaatcggc atgatcctca cgaaggaaac gtacgccatt
     1201 cacgtcgcgt gcgccctgct tgcgattcca actctggcag tttcgtactg gctaagccgc
     1261 gttccggagg ccaagcctgc caagcaaacc tggagttgga tcgatctcgg catgatcgtg
     1321 atcgtaggcg gatttgcgat cgtcttcttc tattcgggaa cgttctttaa ctggggcggt
     1381 gtcaaaggtc tatatctggc atttaaggca tggaccgaga ctggcgcttc gggtcacggc
     1441 cacgaaaagg cgtgggatta ctggctcaag ataatgggac cgtcattgga aatgggccgg
     1501 gcggacttct tcggttacga actcccgatg ctggtcgggc tcactttatg tctgttttgc
     1561 cagaagttta agaatctcaa tttgcgatac ctggcgatct acggcgcggg cagcttcgtc
     1621 gcttacagtt tggttaagta caagaccccg tggtgcgtta tcagtttcgg ctggccactg
     1681 ctgtacgtct tcggcggggc gatcttgttg gttcgtcaaa aacatttgcg tttcgcgcaa
     1741 cgcacgatcg gcgtgctgtt gtccatatcc ctggcttcaa gcatctggtt gaattatttc
     1801 aggtgttctt ctccagacga gccgtacgcg tacgtccaaa cgtataacga catgttcaaa
     1861 ttgacgaaac cgcttcttac gatggcgaag cgagatccgt ctaactatca tcttacggga
     1921 catctgatcc gctccagtat ttacccgctt ccgtgggtat tgggcgactt cgatcgcgtc
     1981 ggttactacg aaggaggaaa catgccggga aatcttgatg gcgattttct ccttgtgcag
     2041 caggacaaaa tcaaagacgt cgaatcgaaa ttgaagggca cctattacac tgacatgatg
     2101 acgcttcgta attatcagga tccatccaag atctttttta gcgccaaagt gtttaaagac
     2161 ttgttcccag gcaaagcgcc ggactttgac ggcaacgcac cgaaaccctc accttctcct
     2221 tcacccgcca acgttccatg aagtgggtca cagctggagt tacgttcgtc aatttgtcgg
     2281 tggtctgcgg agttctcctg ggacttgtcg gaagagggtt aaatgcggtt agcgcagcgg
     2341 tggcactggt ctgtggcgct gcatttgcaa tcgccgcttt tcttgggact cgcgacagcg
     2401 cggttcgaca gaaatccgcc attgatccag caacaaaaca aaaggcaaga aaaccttccg
     2461 ggaccgaaga catgacggtt gcgattccat cagccctgat gcgctatcgc agcgtctggt
     2521 tctgggcggt cgcagtctgt ttcgccgttt ttgctgtgcg atcgttttgc tggctgctgt
     2581 acatcgacag cagcgaacta aagattcagt cgccaaataa tctgggcgac ctctcactgc
     2641 acctgacgct catcaacaat tttgccaatg gcgtcgctct ttggccggac aatccgatct
     2701 tcgtccatag caaattaaga tatccggccg gcatcgacct gttcaacgca ctgctttcgc
     2761 tggttcacat cgatctgctg atcgggttgg tttgggtcgg attgctcgct tcactcgcca
     2821 tcttttacgg gttctaccgg tggggcggca cgttcgctgt tgcaggattc ctgttcaacg
     2881 gcggtatagc cggatttcag tttttgaaga cgttcaagtt tttggattac caaggcgcag
     2941 ctgcagatat cgcgaaaaag cccatcgcct ggaaaagcat tgcattatcc atgctcgtta
     3001 cgcagcgggg ctggctttac gcgatcccgg ccggcctggt gctgctctgg cattggcgcg
     3061 aaaagttttt cacccaatct cctgtagctg tggttgctga tcccggtcag cctgctgacg
     3121 ccgttaagag tgagcccgcc gcggtcaacg cccacggcta caggaaaggc cctctgccct
     3181 ggtgggtcga actgtcgatt tacgcttcga tgccgctgtt ccacctgcat accttcatcg
     3241 cgctgactat cgtgctggtc gtcggattgt ttttcgaacg cgcaaccgaa atcaaattta
     3301 tcattaa
//
LOCUS       DATDAJ010000094         4289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_592440, whole genome shotgun sequence.
ACCESSION   DATDAJ010000094 DATDAJ010000000
VERSION     DATDAJ010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4289
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_592440"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..671
                     /locus_tag="VIS53_02260"
     CDS             <1..671
                     /locus_tag="VIS53_02260"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5766639.1"
                     /translation="LVSKAYARIPSMPMTRLALPYAIWDEYFGTLSKATRKDLRRKFR
                     KAERAPKIKMEVVNDVTPLIDEIHPLYLAVHERSPLKFETLTKDYFRAVAQRMSDRAR
                     FFIWRQNGKIVAFSFCLVCGDAIYDECIGLDYSVALDLHLYFYTLRDIISWSLQQGLK
                     NYYSNPLNYEPKLHLDCELVPLDLYIMHTNPLLNPIFRRVIKYLGPTRHDPVLQRFPN
                     AHEL"
     gene            806..1210
                     /locus_tag="VIS53_02265"
     CDS             806..1210
                     /locus_tag="VIS53_02265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766640.1"
                     /translation="MQNRPSGFGNPWLQLGVSVVCVFASELLLKRGASEVAAPDDAFS
                     WTGINGLASPSVWWAIVLIIASFISWLYVLRYIPLTLAYPLSRVVDILVPLGCWIFLG
                     ELISTLRWCGIALVVFGLALVAKPIAKMEERL"
     gene            1207..1551
                     /locus_tag="VIS53_02270"
     CDS             1207..1551
                     /locus_tag="VIS53_02270"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY5766641.1"
                     /translation="MSFLAFLFILISLVTFVAAQLILKKAMEFSARHDMRNSYFVSRV
                     AIGVFLMTVSFFLTLGLLQRFDLSYLYPFQGLSVIFITILAAVVLKEKLSARLTIGAL
                     LITAGIVLVSMS"
     gene            complement(1610..2455)
                     /locus_tag="VIS53_02275"
     CDS             complement(1610..2455)
                     /locus_tag="VIS53_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766642.1"
                     /translation="MIGRALHLNLDDAWRNEPVGLPVCDARSWAPRLRFSAPPRLIEA
                     FYREHEADLAAPFLLYGSGDFHHLTALRLRSVAEPIVLISFDNHPDWDVRPPKWACGG
                     WVNRALELPNVRLASVWGCGNFECWWPHQIFGNRRAERAGILEVHPWADDRPLKDQQR
                     KGAILRENWRERFQEFAKRLADENVYVTIDLDCLCIEQAVTNWESGRFTVADLEWAFG
                     KLRESSRIIAGDICGAYSPPKYARWKQRFAAEFDRPKLAPPNLEQARATNLATLEKLW
                     PLLAR"
     gene            complement(2452..>4289)
                     /locus_tag="VIS53_02280"
     CDS             complement(2452..>4289)
                     /locus_tag="VIS53_02280"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766643.1"
                     /translation="LYVGTPLLLIPAFALAQARWHPQDIYLFVAAFGAMGHHLPGMIR
                     AYGDRALFERFKWRFIFAPLFLLVTCIAFFWWDLKGILLVVFFWGVWHGLMQTYGFCR
                     IYDAKTGTFDALTRRLDFAMCVSWFATAVALSPYRLGDTLDVYYMSGGPFIPPSVVNL
                     GQNLILAAAIFVTVLFAAHFVRTWVAGHRSNPVKLGLLVTSIAFWWYCNNLVANILVG
                     IALFEVFHDVQYLSLVWIYNRNRVEKDSNIGGFMRFVFRRSGSLIGLYVGLVFAYGSL
                     AFINDNLAVDTVKHILTGVVTASTLLHFYYDGFIWKVRERSTRQSLGLAGGTADVSLG
                     GMLPSWALHGLKWVAIFVVPLGALWFWQTRLSVPEVQRRAWIVADVPQGAKPHFDYGR
                     ILQNEGKPDEAIEQYKLTLQFDPKHAEAHMNLGVALTAQAKFDAAVPHMETAVRLQPN
                     NGGFHLLFGNLLHRIGRIDEAAFHFETGVRLKPYSADAHYGYAAFLAAAGKNDEYIGE
                     LRNVIRLNPNYLDAYLRLGDALFAKGDLEEAKKHYLTALRGDPTLTVAYNNLGKVYLT
                     QGQTSQAIVQFSEALRLNPSYKEAEDNLSIAKASDAFLGTRTTNF"
BASE COUNT          950 a         1214 c         1201 g          924 t
ORIGIN      
        1 cgttggtctc gaaggcttac gcgcgcattc cgagcatgcc gatgacgcgg ttggcgcttc
       61 cgtatgcaat ctgggacgag tatttcggca cgctcagcaa ggcgacccgc aaagatttgc
      121 gccgaaagtt tcgcaaagca gagcgcgcac cgaagatcaa aatggaggtg gtgaacgacg
      181 tcacaccttt gatcgacgaa atccatcccc tatatctcgc cgtccacgag cgatcgccac
      241 tgaaattcga gacgctgacc aaagattatt tccgcgccgt cgctcagcgg atgtcggacc
      301 gggcgcgatt ttttatctgg cgacaaaacg gcaaaatcgt ggcgttcagt ttctgcctcg
      361 tctgcggcga cgcgatctat gacgaatgca tcgggctcga ttacagtgtc gcgctcgatc
      421 tgcacttata cttttacacg ctgcgcgaca tcatctcgtg gtcgctgcaa caagggttga
      481 aaaattacta cagcaacccg ctcaattatg agccgaagct gcatctggac tgcgaattag
      541 tccccctcga tctctacatc atgcacacca atccgctgct gaatccgatc tttcgtcgag
      601 tgatcaaata cctcgggccg acgcggcacg atccagtttt gcagcgattc cccaacgcgc
      661 acgagctttg atagtggcag cgatcacgtg gtagggcggg cagtcaccct gcacgccgaa
      721 cgccccggcg cgcacggagt gacgcgccct accaacggcg attcgaaatc ggttgcggtg
      781 ctttgatcgc acgctagaaa accggatgca aaatcggcca tccggctttg ggaatccctg
      841 gctgcaactc ggcgtgagcg tcgtgtgtgt tttcgcctcc gaactccttt tgaaacgcgg
      901 tgcaagcgag gtcgccgcgc cggacgatgc gttttcatgg accggaatca atggtttggc
      961 gtcgccgtcg gtgtggtggg cgattgttct aatcatcgca agctttatca gttggcttta
     1021 cgtgcttcgc tacatcccgc tcacccttgc ttatccgctc tcgcgcgtgg tcgatattct
     1081 tgttccgttg ggctgctgga tttttctcgg tgaactaatc tccacattgc gatggtgcgg
     1141 gatcgcgctg gtggttttcg gcctggcgtt ggtggcaaag ccgatcgcaa aaatggagga
     1201 acgcctgtga gttttctcgc tttcctgttc atcctgattt cgctggtcac ctttgtggcg
     1261 gcgcagctca tccttaagaa agcgatggaa ttctcggcga ggcacgatat gcgcaactcc
     1321 tatttcgtgt cgcgcgtcgc cattggtgtt tttctaatga cggtttcctt tttcctgaca
     1381 ctcggactgc tacagcggtt cgatctgagt tatctttatc ctttccaagg tttgagcgtg
     1441 atctttatca cgattctcgc cgcggtggtg ctaaaggaaa aactaagcgc gcggctcacc
     1501 atcggtgcgc tcctgatcac cgcaggcatc gtgctcgttt cgatgagcta aattgtgacg
     1561 cgatcgattc ggttgtcctg agctggcagg cgatgcgctt gccctacaat catcgagcta
     1621 ataacggcca gagtttttcc agagtcgcca aattagtcgc gcgcgcttgt tccaggtttg
     1681 gtggcgcgag cttcggtcgg tcgaactcgg cggcaaaacg ttgcttccaa cgcgcatatt
     1741 tcggaggcga atacgcgccg caaatgtcgc cagcaatgat acgggaagat tcgcgcaatt
     1801 ttccaaacgc ccactcgaga tcggccaccg tgaagcgacc gctctcccag ttcgtcaccg
     1861 cctgttcgat gcacaggcaa tcgagatcga tcgtgacgta gacattttcg tcggcgagac
     1921 gtttcgcaaa ttcttgaaaa cgctcgcgcc aattctcgcg cagaatggcc cccttacgct
     1981 gttgatcctt caatggccga tcgtctgccc acggatggac ttcaagaatt ccggcgcgtt
     2041 cggcgcgacg attaccgaaa atctggtgcg gccaccaaca ttcgaaattg ccgcagcccc
     2101 aaacactcgc aagccgtaca tttgggagtt ccaatgcgcg gttcacccat ccgccacatg
     2161 cccatttcgg cggccgcaca tcccaatcgg gatggttgtc gaacgagatg agcacgatgg
     2221 gttcggcaac agaacgcaat cggagcgctg tcaggtggtg aaagtcgccg gagccgtaga
     2281 gcaggaacgg cgcggcgaga tctgcctcgt gctcccgata gaacgcttcg atcaaacgcg
     2341 gcggcgcgga gaagcgtagc cgcggtgccc acgagcgtgc atcacacacc ggaaggccga
     2401 ccggctcatt ccgccacgcg tcatccagat tgagatggag agcgcggcca atcaaaaatt
     2461 agttgtgcgt gtgcccaaga atgcgtcgct cgctttggcg atgctcaagt tgtcctcggc
     2521 ctctttgtag ctgggattca gacgcagcgc ttcactgaac tggacaatgg cctgggaggt
     2581 ctggccctgg gtcaggtaca ctttgcccaa attattgtag gcaactgtca gcgtgggatc
     2641 cccgcgaagt gccgtcagat aatgcttctt ggcctcctcg agatcgcctt tggcaaacag
     2701 cgcatcgccg aggcgaagat aggcgtccag gtaattcggg ttgagtcgga tgacgttccg
     2761 aagctcgccg atgtattcat catttttgcc ggctgcggca aggaaagctg cgtagccgta
     2821 gtgggcatct gccgaatacg gcttcaggcg gacgccggtt tcaaagtgaa acgcggcctc
     2881 gtcgatgcgg ccgatccggt gcagcaaatt accgaacaac agatgaaagc cgccgttgtt
     2941 cggttggaga cgcaccgccg tctccatgtg cgggactgcc gcgtcgaatt tggcctgcgc
     3001 agttaatgca acgccgagat tcatatgcgc ttccgcgtgc ttgggatcga actggagcgt
     3061 gagtttgtac tgttcgatgg cttcgtctgg tttgccttcg ttttgcaaga tccggccgta
     3121 atcaaaatgc ggctttgcgc cctgcggcac atccgcgacg atccatgcgc gccgttggac
     3181 ctctggaaca ctgagacgcg tctgccaaaa ccacagcgcg cccaggggca ctacaaatat
     3241 cgccacccat ttcaaaccgt gcaaagccca actgggaagc atacctccga gcgagacgtc
     3301 agcggttcca ccggcgagcc cgagtgattg tcgagtagag cgctctcgca ctttccagat
     3361 aaatccgtcg taataaaagt ggagcagcgt agaagcggtg accacgccgg tcaggatgtg
     3421 tttgacggtg tcgacggcga gattgtcatt gatgaatgcc agcgagccat aagcgaagac
     3481 aaggccaaca taaaggccaa tcagggagcc gctccttcgg aacacgaatc gcatgaatcc
     3541 gccgatgttg ctgtctttct cgacgcgatt gcgattgtag atccagacga gcgacaagta
     3601 ctgcacatcg tgaaagactt cgaacagtgc gatcccgacc aggatgtttg cgacgagatt
     3661 attgcagtac caccaaaacg cgatgctggt caccaacagt ccaagtttta ccggatttga
     3721 ccgatgcccg gcgacccacg tccgaacaaa atgcgcggcg aacaaaaccg tcacaaaaat
     3781 ggctgcggcg agaattaagt tttggcccag gtttacgacg gagggcggaa taaaaggccc
     3841 gcccgacatg taatatacat ctagcgtgtc gcccagccga tatggcgaga gcgccaccgc
     3901 agtggcaaac cagctcacgc acatggcaaa atcgagccgg cgggtcagcg catcgaacgt
     3961 tcccgttttg gcgtcgtaga tgcggcagaa accgtaggtc tgcatcaacc cgtgccagac
     4021 gccccagaag aaaacgacca gcaaaattcc tttcaggtcc caccaaaaga aagcgataca
     4081 ggttacgagc agaaatagcg gcgcaaaaat gaagcgccat ttgaagcgct cgaataacgc
     4141 gcgatcgccg tacgcgcgga tcatgcccgg caggtgatgc cccattgcgc caaacgccgc
     4201 gacgaacaga taaatgtcct gcggatgcca acgcgcctgg gccagcgcga acgcgggtat
     4261 cagcagcagc ggtgtgccaa cgtacaaga
//
LOCUS       DATDAJ010000095         4121 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_599781, whole genome shotgun sequence.
ACCESSION   DATDAJ010000095 DATDAJ010000000
VERSION     DATDAJ010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4121)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4121)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4121
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_599781"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..>4121)
                     /locus_tag="VIS53_02285"
     CDS             complement(140..>4121)
                     /locus_tag="VIS53_02285"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEY5766644.1"
                     /translation="IHAGVDDRRGAHLALSVERLAALVQAPLQRIGLSATQKPIEEVA
                     RFLVGTRAVDEAGKPDCEIIDIGHRRELDLAIEMPKSPLEAVMPNEVWEEVYRRLAEL
                     IGAHRTTLVFVNTRRMAERVTHHLSELLGADAVTSHHGSLSAKLRLEAEDRLKRGELK
                     ALVATASLELGIDIGSVDLVCQLGTTRSIATLLQRVGRAEHKRSGLPKGRIFPLSRDE
                     LIECAALLRCVNRGELDRLTIPENPLDVLAQQAVAAASTEDWDENEFFELVCSAWPYR
                     NLTRGEFDQVVTMLADGFSTKRGRRSALIHHDAINHRLRGRRGARITALTSGGAIPDN
                     ADYRVILEPSETFVGTVNEDFAVESLAGDIFQLGNASWRILRVTSGVVRVEDAKGQPP
                     GIPFWLGEAPARTNELSHAVSNLRMEIEKHLSVGEADGFPDKIEEWVAKEFQLPQNAA
                     EQVAAYFSEAYRSLGAIPSQQTLMLERFFDESGGMQLVLHAPFGSRVNRAWGLALRKR
                     FCRSFNFELQAAATDDAIVISLGTQHSFPLDEVFRYLNSKTVRDLLVQALLDAPMFTI
                     RWRWNATRSLAVPRFRGGAKVAAPLQRMESENLLAAVFPDQLACLEHIVGDREIPDHP
                     LVKQTIDDCLTEAMDIDGLEEVLRRIEHGEIRCIARDLPEPSPLAAEILNARPYAFLD
                     NAPLEERRTQAVYTRRASERNGSDGLGVLDAAAIEKVKKEAWPEATNPDELHDALMLI
                     GVMTPEEIYQSASENPEQFFSTLVAENRATRLLIQAQYCSSREVLECGAAAPLLNGDA
                     TPEKRRSTGVLQNADVHKTFYVASERLPMLRAIYPNAVCEPELVLPDSMRGNTWERTD
                     AIRELIRGRMEVGGPITVSELADTLVLQQSEIDAALLALEAEGFVLRGKFHPDATEQE
                     WCDRRLLARIHRLTIDRLRAEIQPISVQDFYRFLFAWQRADQEHRTEGLEGLQSVLEQ
                     LDGCELPLAAWESAVLPARVADYDPEWLDRLCFSGRVGWGRLSTPQNSNARASAPLRT
                     SPIALYLRENLANWLALTQPNSAIELSVTSQAVFEALQSGGALFFSELVHRSGLLPSQ
                     IEEALSQLAALGLVTSDSFDGLRALLVPSNKRPTFGRNPTKRRRRTNLASIEFAGRWS
                     LLPRSGVLPAVMEAPNGAGPREAAIEKFARVLLRRYGVVFRRLLERESFPVTWYELGR
                     IYRQWEARGEIRGGYFVGGVSGEQFALPEAIGLLRSIRKSSSNRELITLSAADPLNLQ
                     GVLTPGARIPAFTANRILFRDGLPIAALESREIRTLSDEHIPGLQIENALRIGRLRPS
                     LRPYYK"
BASE COUNT          911 a         1248 c         1112 g          850 t
ORIGIN      
        1 cgccgccgcg gacttcctgc gacgtctcaa attcggccaa tcctccaact gcgcagggac
       61 gccgccagaa gttcgttccg gcgggacgcc gaaaccaaca cgcgagacgc gtgcgctacc
      121 caatcgcgcg cgacgagcgc tatttgtaat acggccgaag cgacggccga agcctgccga
      181 ttcgaagagc gttttcgatt tgcaagccag ggatatgctc gtcggacagc gttcgaatct
      241 cgcgtgactc aagcgcagca ataggcagtc cgtcgcgaaa cagaatccgg ttcgcggtaa
      301 acgcagggat tcgcgctccc ggtgtgagaa caccttgcaa atttaaagga tcggcagcac
      361 tcaacgtgat tagctcgcgg tttgacgagc tcttgcggat cgaccgcaac agaccgatcg
      421 cctccggcaa cgcgaattgt tcgccgctta ctccgccaac gaaataaccg ccgcgaattt
      481 ctccccgtgc ttcccattgt cgataaatgc gccccagctc gtaccacgta acggggaaac
      541 tctctcgttc gagcaatcgg cgaaacacaa cgccgtagcg acgcaataac acgcgagcga
      601 atttttcaat cgccgcttcg cgcgggcctg cgccgtttgg cgcctccatc accgctggaa
      661 ggacaccgct cctcggcaat agtgaccagc gacctgcaaa ctcgatactg gcgaggtttg
      721 ttctgcgccg gcgttttgta ggatttcggc cgaaggtcgg acgtttattt gaaggaacga
      781 gaagagcgcg taacccgtcg aaactgtccg aagttaccag accgagcgcc gcgagctgtg
      841 acaaagcctc ttcaatttgg gaaggcaaca agccgctgcg gtggaccaat tcgctgaaga
      901 aaagcgcgcc gccactttgc agtgcctcaa acacagcttg gctggtaacc gaaagttcga
      961 ttgccgagtt cggctgagtc aacgcgagcc aattggcgag attttcgcgg agataaagcg
     1021 caattggact cgtccgcaat ggcgccgatg ctcgtgcgtt tgaattttgc ggcgtgctca
     1081 aacgtcccca gccaacccgg ccggaaaaac agagccggtc cagccattcg ggatcgtaat
     1141 cggccacacg cgccggaagc accgccgatt cccacgcagc cagtggcaac tcgcaaccat
     1201 cgagctgttc caggacggat tgcaggcctt ccagcccttc ggtccgatgt tcctggtcgg
     1261 ctcgctgcca tgcaaaaaga aatcgataga aatcctgaac cgagatcggc tgaatttccg
     1321 cgcgcaatcg atcgatcgtt aaccgatgaa ttcgcgccaa caatctgcga tcacaccatt
     1381 cttgctcagt cgcatcggga tgaaatttgc cgcgcaacac aaaaccttcc gcttcgagtg
     1441 cgagcagcgc tgcgtcaatt tccgactgtt gcaaaactag tgtatctgcg agctcgctga
     1501 ctgtaattgg tccgccaacc tccatgcgac cgcgaatcaa ttcgcgaatc gcatcggtgc
     1561 gttcccaagt attgccacgc atggaatcag gcaaaaccaa ttccggctca cagacagcgt
     1621 tcggatagat cgcgcgaagc atcggtaatc gttccgaagc gacgtaaaaa gttttatgca
     1681 cgtcagcgtt ttggagtacg ccggtgctcc ggcgcttttc aggagttgcg tcaccgttca
     1741 aaagcggcgc agcagcgccg cactccaaaa cctcgcggct agaacaatac tgcgcctgaa
     1801 tgagaagacg cgtcgcgcgg ttctccgcca cgagcgtcga gaaaaattgc tccgggtttt
     1861 cgctcgcgct ttgataaatc tcttccggcg tcattacccc gatcaacatc agtgcgtcat
     1921 gcaattcatc cgggttcgtt gcttcgggcc acgcttcctt tttaaccttt tcgattgcgg
     1981 cggcgtcgag aacaccgagc ccgtcgctgc cgtttctctc cgaggcgcgc cgcgtgtaca
     2041 ccgcctgtgt gcggcgttct tccaacggcg cgttgtcgag aaatgcgtac ggccgcgcat
     2101 tcagaatctc ggccgccaat ggcgacggct ccggtaaatc gcgcgcgatg catcggatct
     2161 caccgtgctc gattctgcgc aacacttctt ccaatccatc gatgtccatg gcttcggtga
     2221 ggcaatcatc aatcgtctgc ttcaccagtg gatgatccgg aatctcgcgg tcacccacga
     2281 tgtgctccag gcacgcgagc tgatccggga aaactgcggc caagagattc tccgattcca
     2341 tgcgttgcag cggtgcggcg actttcgcgc cgccccggaa tcgcggcacg gctagcgaac
     2401 gggttgcgtt ccagcgccag cgaatcgtga acattggcgc gtcgagcaac gcttgaacca
     2461 agaggtcgcg aactgttttg gaattgagat accgaaaaac ctcatcgagc ggaaatgaat
     2521 gctgcgtacc gagcgagatc acgatcgcgt catcggtcgc agctgcctgc agctcgaaat
     2581 tgaacgaacg gcaaaagcgt tttcgcagcg ccaaacccca ggcgcgattg acccggctgc
     2641 cgaaaggcgc atgcaaaacg agttgcatac cgcccgattc atcgaagaag cgctccagca
     2701 tcagcgtttg ctgtgaggga attgcgccta acgaacgata tgcctccgaa aaatacgcag
     2761 cgacctgttc cgcggcgttt tgtggcaact ggaattcttt agcgacccat tcctcaattt
     2821 tgtcggggaa gccgtcagct tcccctacag acaaatgctt ttcgatttcc atccgcaaat
     2881 tagaaacagc gtgagaaagc tcgttggttc gcgcgggagc ttcgcccagc caaaatggaa
     2941 ttcccggcgg ctgacctttt gcgtcttcca cccgaacgac gccggaagtc acgcgcagga
     3001 ttcgccacga tgcgtttccc agttgaaaga tgtctccggc cagactttcg acggcgaaat
     3061 cttcgttaac cgtgcccacg aaagtttccg acggctcgag gatcactcga taatcggcgt
     3121 tatcaggaat ggctccgccg gatgttagcg cagtgatccg ggctccccgc cttccgcgca
     3181 aacgatgatt gatcgcgtca tgatgaatca atgccgagcg ccgtccacgc tttgtgctga
     3241 aaccgtcggc aagcattgtc acaacctgat cgaactcacc gcgcgtgagg ttgcggtacg
     3301 gccaggctga acagacgagc tcgaagaatt cgttttcatc ccaatcttcc gttgaagctg
     3361 ccgcaacggc ttgctgcgcg agcacatcga gcggattttc gggaatcgtc agacggtcga
     3421 gttcgccacg attaacacag cgcagcagcg ccgcgcactc gatcaattca tcgcggctca
     3481 acgggaaaat ccggcctttc ggcaaaccgc tccgcttatg ttcagcccga ccgacacgtt
     3541 gcagcaacgt ggctatcgag cgcgtcgtgc ctaactggca aacgagatca accgagccaa
     3601 tatcaattcc caactccagc gaagccgttg cgacgagcgc tttcaattcg ccgcgcttca
     3661 atcggtcttc cgcttcgagc cgcagttttg cagaaagact tccgtgatgt gacgtgacag
     3721 cgtcggcgcc cagcaactca ctcaggtgat gtgtgacacg ctcggccatg cgacgtgtgt
     3781 tgacgaaaac caaagtcgtt cgatgcgccc cgattaactc tgcgagtcga cggtagactt
     3841 cctcccaaac ttcattcggc atcaccgctt caagcggcga cttcggcatt tcgatcgcca
     3901 gatctagttc gcggcggtga ccaatatcga tgatttcaca atccggtttg ccggcttcgt
     3961 ccacggcgcg agtgcctacg aggaaacgcg cgacttcttc gatcggtttc tgcgttgcgg
     4021 ataaaccgat tcgctgcagt ggagcttgca ctagcgcggc caaacgttcg acgcttagcg
     4081 cgaggtgcgc gccgcgccgg tcatcgactc ccgcgtgaat c
//
LOCUS       DATDAJ010000096         2427 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_600356, whole genome shotgun sequence.
ACCESSION   DATDAJ010000096 DATDAJ010000000
VERSION     DATDAJ010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_600356"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..779
                     /locus_tag="VIS53_02290"
     CDS             <1..779
                     /locus_tag="VIS53_02290"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5766645.1"
                     /translation="VISDQERDTAIAAAGSSRANVEADQATVETAELNLGYTKVTAPI
                     DGLAGFANSQVGDLVGPSTGPLTTVSQLDPIKAVVSAGEGPFTDFVSRHPDATERNAY
                     VKTLDFELILGNGEVYPRKGNFYALDRSLDPRTGSIRYYVTFPNPGNVLRPGQFGKVR
                     FVADMKKGAMVIPQEAVNELQGGYQVAVVDQNNKASIRPVKMGERIGAMWEVNDGLKP
                     GDRVIVQGAQKVREGSPVTVKEWTPPSDALISKSDQAKDR"
     gene            784..>2427
                     /locus_tag="VIS53_02295"
     CDS             784..>2427
                     /locus_tag="VIS53_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5766646.1"
                     /translation="MSEFFVRRPIVAIVIAILLTLIGGVCILALPVAQYPQIAPPEIQ
                     VRTHYTGADALTVEQAVAAPIEQQMSGVDNMNYMYSINASNGDMRMQVNFDIATDPNI
                     DQVLAQLRVAQAQSQLPADVNSFGVTVQKSTTAPLMLVALYSPNNSYDGIFLANYGYI
                     NLVDQLTRIPGISNVQIFGAGQYAMRLWVKPDQLAKLGITVPDIITAVQRQNNVNPAG
                     QVGGEPIPSGQKFTYTVRAQGRLQTPEEFGNIVVRADPDGSFVRVKDIARIDLGAQTY
                     NLRSRLNGQPSAILALYQLPGTNALKAAQGVRKLMAEAKQRFPGDMEYAVSLDQTLSV
                     TEGLHDIVKTLFEALALVVLVVFIFLQGWRATLIPLCAVPVSLIGTFVLFPLFGFSIN
                     SLSLFGLVLAVGLVVDDAIVVVEAVERHIEEGMAPREATLQAMREVSGPVIGIALVLS
                     AVFIPTAFLPGITGRLYQQFALTIAISVIFSAFNALSLSPALSSLLLRPRKKTRGPLG
                     WFYDRFNRVFGAATHGYVNWSRLAIRKSILSLGLLVVLAI"
BASE COUNT          538 a          648 c          706 g          535 t
ORIGIN      
        1 aagtgatcag cgatcaggaa cgcgacactg ccattgcggc cgcgggatcg agcagagcga
       61 atgttgaagc cgatcaagcg acggtggaaa cggcggagtt gaatcttggt tatacaaagg
      121 tcaccgcgcc gatcgatggg ctcgcggggt tcgcgaacag ccaggtgggc gatctggtcg
      181 gcccaagtac gggaccactt acaacagttt cacagcttga tccgattaaa gccgttgtca
      241 gcgccggcga aggaccgttc acagatttcg tttcgcgcca tccagacgcg actgagcgca
      301 acgcatacgt gaaaactctc gacttcgaat tgattctcgg aaacggcgag gtgtatccgc
      361 gtaaaggtaa cttttacgcg ctcgatcgca gcctggatcc gcggactgga tcgatccgct
      421 attatgtgac gtttccgaat ccgggaaacg ttttgcggcc gggccaattc ggcaaagtgc
      481 ggttcgttgc cgacatgaaa aaaggcgcga tggtgatccc gcaggaagcg gtaaacgaat
      541 tgcagggcgg ctaccaggtc gcagttgtcg atcaaaacaa caaagccagc attcgtccgg
      601 tcaaaatggg cgaacgcatc ggcgcgatgt gggaagtgaa cgacggactt aaaccgggcg
      661 acagagttat tgttcaaggc gcgcaaaaag tccgtgaagg ctcgcctgtc acagtgaaag
      721 agtggacgcc gccgagcgat gctttgattt caaaatcaga tcaggcaaag gaccgctgat
      781 ccaatgtcgg agtttttcgt caggcggccc atcgtcgcga tcgtcatcgc catattgctg
      841 acgctaatcg gtggcgtctg catcctggcg ttgccggtgg cgcaatatcc gcaaatcgcg
      901 ccgccggaaa tccaggtgcg cacgcattac acgggagccg atgcattgac agtcgagcag
      961 gcggtcgccg caccgatcga gcagcagatg agtggagtcg acaacatgaa ctacatgtat
     1021 tcgatcaacg ccagcaacgg cgatatgcgc atgcaggtta atttcgatat cgccaccgat
     1081 ccaaacatcg atcaagtgct ggcgcagctc cgcgtggcgc aagctcaatc gcagttaccg
     1141 gccgacgtga acagctttgg cgtgaccgtg cagaaatcga caacggcgcc gctgatgctc
     1201 gtcgcgcttt attcgcctaa caactcatac gatggaattt ttctcgcgaa ctacggatac
     1261 attaaccttg tcgatcaact gacacgcatt cccggcattt cgaatgtgca aattttcggc
     1321 gcgggccagt atgcgatgcg gctgtgggta aaacctgacc aactggccaa gctcggaatc
     1381 accgtgcctg acatcatcac ggccgtgcag aggcaaaaca atgtgaatcc cgccggccag
     1441 gtcgggggcg agccaattcc ttccgggcaa aaatttacct acaccgttcg cgcacaaggc
     1501 cggctgcaaa cgccggaaga atttgggaac atcgtggtgc gggcggatcc cgatggctcg
     1561 tttgtaaggg tgaaagacat tgcgcggatc gacttaggcg cacagaccta caatctgaga
     1621 tcacggctca acggccagcc gtccgcgatt cttgcccttt accaattgcc gggaaccaac
     1681 gcgctgaagg ccgcacaagg tgtgcgcaag ctaatggcgg aagcaaaaca gcgttttccc
     1741 ggcgacatgg aatacgcggt ttcgctcgat caaaccctct cggtgacgga aggattgcac
     1801 gacatcgtta aaacgttatt cgaggccctc gcactggtcg tcttggtcgt attcattttt
     1861 ttacaaggtt ggcgcgctac gctgattcca ttgtgcgcgg ttcctgtgtc gttgatcgga
     1921 acgtttgtgt tgttcccact gttcgggttc tcgattaact cactttctct tttcgggttg
     1981 gtgctggcag tcgggcttgt tgtggatgac gccattgtcg ttgtcgaagc tgtcgagcgc
     2041 cacatcgaag aaggaatggc gccccgcgag gcgacgcttc aggcgatgcg cgaggtttcc
     2101 ggaccagtga tcggaatcgc gctcgttctt tccgccgtgt ttattccaac ggcgttcctg
     2161 ccgggaatca cgggccgatt gtatcaacag tttgcactga cgattgcgat ctcggtaatt
     2221 ttctcggcat ttaatgcgct gtcgctgagt ccggcgcttt cttcgttgtt gctgcggccg
     2281 cgaaagaaaa cacgcggccc gctcggttgg ttttacgatc ggttcaatcg cgtgttcggc
     2341 gccgcgacgc acggctacgt gaattggtcg cgtctggcaa ttagaaagag catcttaagc
     2401 ctgggcttgc tcgtagttct tgcgatc
//
LOCUS       DATDAJ010000097         4162 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_602789, whole genome shotgun sequence.
ACCESSION   DATDAJ010000097 DATDAJ010000000
VERSION     DATDAJ010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4162)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4162)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4162
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_602789"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..411)
                     /locus_tag="VIS53_02300"
     CDS             complement(<1..411)
                     /locus_tag="VIS53_02300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766647.1"
                     /translation="MPKFFIKTYGCQMNERDSEQVAHSLVERGYERVGHESEADVVLL
                     NTCSVRDMADQKALGKMGMLGRMARERPHVVFGFLGCMAQARGGELLKGLPHVDLVVG
                     TQKFHRVADYVDKLVAGKKNRIPGNAERPTSNAQR"
     gene            688..1572
                     /gene="mtnP"
                     /locus_tag="VIS53_02305"
     CDS             688..1572
                     /gene="mtnP"
                     /locus_tag="VIS53_02305"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEY5766648.1"
                     /translation="MSQTNDEPPAIGIIGGSGLYQMEELRDTTEHKIDTPFGAPSDVL
                     VGGKVGERQVYFLPRHGRGHRILPHEINYRANIYALRSLNVRWIISVAAVGSLQEKYA
                     PRDLVLPSQFYDRTSQRTAHTFFGEGIAAHIGFAEPISADLRNLLAESARSLGYAVHN
                     GGTYVNMDGPAFSTRAESEFNHRNGFDVIAMTNLPEAKLAREAEIALATMAMITDYDS
                     WKIEEEPVSAEIVLSHLLANAETARRIIADVIPRIPNEPNWPEHSALDTALVTDRKLW
                     PEATVEKLRPILGRFLAK"
     gene            1706..2110
                     /locus_tag="VIS53_02310"
     CDS             1706..2110
                     /locus_tag="VIS53_02310"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5766649.1"
                     /translation="MKTRCFDHIDLRVTNMETAGKFYGKILPQLGFVHESPGDDYYTF
                     YAGGGERPLEFFCLSEDKNHRPNGTRIAFWADTREEVDQISKLVRHAGGKNLEGPEVC
                     EDYSPGYYAFFFEDPDGNKLEICCREKPVFAA"
     gene            2284..2544
                     /locus_tag="VIS53_02315"
     CDS             2284..2544
                     /locus_tag="VIS53_02315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766650.1"
                     /translation="MQRPKVDDDLTLLTDFGKTEAIVVEVLDNPATEEGVLLKVMTRG
                     PFEQGQQVWIVGRDRSKVGATVEKVLKQTIDSEVTLSTALPV"
     gene            complement(2655..3290)
                     /gene="pncA"
                     /locus_tag="VIS53_02320"
     CDS             complement(2655..3290)
                     /gene="pncA"
                     /locus_tag="VIS53_02320"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEY5766651.1"
                     /translation="MTAPFIKSALILVDLQNDFLPGGALAVPHGDEVIPVANELLRRF
                     DVVVATKDWHPSDHGSFAANHKGKKPGDRIILDGIEQILWPVHCVQNTHGAEFAPLFD
                     TSRIAQVFHKGTERNIDSYSTFFDNAHRRHTGLAHYLEKRSIKEIYLMGLALDYCVKY
                     SALDARHLGLNTNVIVDGCRGIELEPGDIDRALDEMKRAGAIMLESPELSG"
     gene            complement(3700..>4162)
                     /locus_tag="VIS53_02325"
     CDS             complement(3700..>4162)
                     /locus_tag="VIS53_02325"
                     /inference="COORDINATES: protein motif:HMM:NF037014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766652.1"
                     /translation="DPEKTSYPGSLQVRRFHQPDGRFIADAIYEIDRGISEPREIVDP
                     ETNERLTIGDASAIASVGEAVGFPWDDNVVPYSRPAHFTDLLVPIFRGGQLVYEAPSI
                     EASRKHLRKQLSCAPPEILQLTNPVRYKVGLEQSLHELRSKLIARVRQQLK"
BASE COUNT          935 a         1105 c         1176 g          946 t
ORIGIN      
        1 gcgttgggcg ttggacgttg ggcgttcggc gtttcctgga attcgattct tcttccccgc
       61 caccaacttg tcgacgtaat cggccacgcg gtgaaacttt tgtgtgccaa cgacaagatc
      121 gacatgcggc aaacctttta gcagttcgcc accgcgtgcc tgggccatgc acccgagaaa
      181 accgaacacg acgtgtggcc gttccctggc catgcggcca agcatgccca tcttaccaag
      241 cgccttctgg tcagccatgt cgcgcacgct gcacgtgttc aggagcacaa cgtcggcttc
      301 cgactcatgc ccgacccgtt cgtaaccgcg ctctacgagc gaatgcgcga cctgttcgga
      361 gtcgcgctcg ttcatctggc aaccataagt cttgatgaag aatttcggca tggacggacg
      421 aaaacaatac atggcgagca aaggtcgtcc aagacacggc gcccggattt ttaccagcgc
      481 acatcaattg cactgtcatg ttgagcgcaa gcgaaacatc tcttgatatt gcttcttctg
      541 cggactcaaa aatgatctga gattcttcgc ttcgctcaga atgacaatgt gctgtttgtt
      601 ttttgtagcc ggtggattgc taatccatag tcacccagcg ttatcagatt cgtgacaatt
      661 cgtgcgattg atgtcttaaa tgtccgcatg tctcaaacca acgatgaacc tccggcaatc
      721 gggattatcg gtggtagcgg tctctatcag atggaggagt tgcgcgatac gactgaacac
      781 aaaatcgaca caccgtttgg agcgccgtcg gacgtactcg tcggtggaaa agtaggcgag
      841 cgtcaggttt actttttgcc ccggcatggc cgcgggcatc ggattctgcc gcacgaaata
      901 aattatcgcg ccaacattta cgcgctacgc tcgttgaacg ttcgctggat catttcagtg
      961 gcggcggtcg gcagcttgca ggaaaaatac gcgccgcgag atctggtctt accctcgcag
     1021 ttttatgatc ggaccagtca acggacggcg catacctttt tcggtgaagg cattgccgcg
     1081 cacattggat tcgccgaacc gatcagcgcg gacctgcgca atctgttggc tgaatcggcc
     1141 aggtcactag gatacgccgt tcacaacggc ggcacttacg tgaacatgga cggcccggca
     1201 ttctcgacgc gtgcggaatc tgaattcaat caccgcaatg ggttcgacgt gatcgccatg
     1261 accaatcttc cagaggcaaa gctggctcgc gaagcggaga tcgcactcgc taccatggcc
     1321 atgatcactg actacgattc ctggaaaatc gaagaggaac cggtgtcggc tgagatcgtt
     1381 ctcagtcatt tgctcgcaaa tgcagagaca gcgcggcgaa tcatcgcgga tgtcatcccg
     1441 cgaattccca atgagccgaa ctggccggaa cattccgcgt tggatacggc gctggtgact
     1501 gaccggaagt tgtggccgga ggcgacggtg gaaaagttgc gaccaatttt ggggcggttc
     1561 ttagcgaaat aggccctgtc gatgtgggta gggcgcgtca ctccgtgcgc gccgtgaatc
     1621 gcgatcggca cgcagaggac tgcgcgccct acctttgcga taacgaccga ttgaattgcg
     1681 aggcgacgcg attgagaatc acaaaatgaa aacgcgttgc ttcgatcaca tcgatttgcg
     1741 ggtgacaaac atggaaacgg cgggaaagtt ctacggcaaa attctgccgc agcttgggtt
     1801 tgttcacgaa agtccgggcg acgattatta tacgttctat gctggcggtg gcgaacggcc
     1861 gttggaattt ttctgtttaa gcgaggacaa gaaccatcgt cccaacggca cgcgaatcgc
     1921 attttgggcg gacacacgcg aagaagtgga tcagatttcg aaactcgtgc gccatgctgg
     1981 tggcaaaaac cttgagggtc cggaagtttg cgaggactac agtccgggtt actacgcctt
     2041 cttcttcgaa gatcccgatg gcaacaaact cgaaatttgc tgccgcgaga agccggtatt
     2101 tgcggcttag cacctttgtt tgatcgtttg gtttttgttt gtccggctaa aacgcgacaa
     2161 gaggaagacg caattcgcgg ctgagcaaac tgatcgaaaa gctctcttct tcgtgatgac
     2221 cgacacactc ggcacggtag cgaggggcga atactgttag cgggaacacc ggggatgctt
     2281 tccatgcaaa ggcctaaagt tgacgacgac ctgactttgc tgacggactt cggcaaaact
     2341 gaagcgatcg tcgtcgaggt gctcgataat ccggctaccg aagagggagt tttgcttaag
     2401 gtcatgacgc gcggcccgtt cgagcaaggc cagcaagtct ggatcgttgg ccgtgaccga
     2461 tcaaaggtcg gagcgaccgt tgagaaagtt ctcaagcaaa cgatcgacag cgaggtaacg
     2521 ctctcgaccg ccctgccggt atagctgtag ctgcggtcgg taaccgcggc tgccggagtg
     2581 atcccgcctt cgctaaccag ccttcgcgta aggctacggc gggtcgagaa gctacggcgg
     2641 acaagcggcc tcggctatcc cgaaagttcg ggactttcca gcataatcgc gccggcgcgc
     2701 ttcatttcat cgagtgcgcg atcgatgtcg cccggctcca gctcaattcc gcggcagcca
     2761 tcgacgatca cattcgtatt caagccaagg tggcgggcgt cgagcgcact gtatttcacg
     2821 cagtaatcca acgccaggcc cataaggtag atctccttga tcgatcgctt ctccaaataa
     2881 tgagcaagac cggtgtgtcg tcgatgggcg ttgtcgaaaa acgtactgta actatcaatg
     2941 tttcgctcgg tgcctttgtg aaaaacctga gcgatgcggc tggtgtcgaa taacggggcg
     3001 aactcggcac cgtgcgtgtt ttgaacgcaa tgcaccggcc ataggatttg ttcgattccg
     3061 tcgagaatga tgcgatcacc cggcttcttt cccttgtggt ttgcggcgaa gctgccgtgg
     3121 tcggacggat gccagtcttt agtcgcgacg acgacatcga agcgtcgcag caattcattg
     3181 gcaaccggaa tgacttcatc gccatgcggc accgccaacg cgccgcccgg caagaaatca
     3241 ttctgaagat cgacgagaat tagcgcactt ttgataaatg gtgctgtcat gttgagcgga
     3301 gcgaaacatc tctgtctgtg ttcccgtgca caattagccc gggattgctc ggagattctt
     3361 cgcttcgctc agaacgacaa tacacgattc gacgaggatc agcgcgttcg gtgctacaac
     3421 cttgttgcgt ctccccattt caggatccgt tcagcgctaa aagcgctatc tcatgttagc
     3481 ctggggcaac gccgcaggaa ttcaaatcgc cgcgtaaaat cagcgctgaa agcgcgtttc
     3541 aatcgcgctg gaagtgtttc gtgctttcag cgctggtgtc ttggaaacca taaatcctgg
     3601 gtcgatgccc caggcttttg cgttgaatgc tgcgcttttg gcgctaaaca cacgcgcttt
     3661 tggaaagcga gaggcgaaga tgggctctgg atgaatagtt catttcaatt gctgtcgaac
     3721 gcgcgcaatc aatttagatc gtaactcgtg caatgattgt tcgaggccga ccttatatcg
     3781 aaccgggtta gtcagctgca aaatctcggg aggcgcgcaa ctgagctgtt tacgcaggtg
     3841 cttgcgcgac gcttcaatgc tcggcgcttc ataaacgagt tgcccgcccc gaaaaatcgg
     3901 cacaagcaaa tcggtaaagt gtgccggccg actgtagggg acgacgttgt cgtcccatgg
     3961 gaagccgacg gcttccccta cagatgcgat ggcgctcgcg tcccctatgg ttagtcgctc
     4021 gtttgtttcg ggatctacga tttcccgggg ctcagaaata ccgcgatcaa tttcgtaaat
     4081 cgcgtcggcg ataaatctac cgtcgggctg atggaagcgg cggacctgca acgaaccggg
     4141 gtaggacgtc ttttcgggat ca
//
LOCUS       DATDAJ010000098         2491 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_604475, whole genome shotgun sequence.
ACCESSION   DATDAJ010000098 DATDAJ010000000
VERSION     DATDAJ010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_604475"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            458..1159
                     /locus_tag="VIS53_02330"
     CDS             458..1159
                     /locus_tag="VIS53_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766653.1"
                     /translation="MNALLEPPPKRGIGCFGKGCLFLIVLAILFVVVGVGGTYWGLRH
                     VYLSNKPAPIPETSASSETAAATPGETSMTAPSKKSAEVRKRFDTMKKAARAHEQTEV
                     ELTAADINALIAANRKSRGTASVGINDTVLQAQFSIPLERLDVPFRSAFGLSDRYLNA
                     AVTIVAPPGTNATSVQLSEVTLNGHGIPAGLLDWGLPGVGRSLRSYVIKYANQYGVTD
                     GEIRDGKVILRTRGH"
     gene            1348..2100
                     /locus_tag="VIS53_02335"
     CDS             1348..2100
                     /locus_tag="VIS53_02335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766654.1"
                     /translation="MTKRDENLWQGIDPGAQDALSPRDYRTASFAQELAQRGVDAGEL
                     VAADKNQREIQEAWIPGVEIFARKIHPQRHRGCFGEFVRRDEGILARIGLWPKQWSAA
                     RMFAYTAKGFHVHPPSVPEGSAAADWLRRLFADEPENYSLRRYDDEQWDVMFFLQGRV
                     EMILCDIRAGLPRRVMRFFVEGDNHRGSNNVGVVIPAGVAHALRAEGGEDVIMVYGTS
                     TSFQPEFEGRIASDVENAELPESWQKFLGRGD"
     gene            2150..>2491
                     /locus_tag="VIS53_02340"
     CDS             2150..>2491
                     /locus_tag="VIS53_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766655.1"
                     /translation="MKRSFDPAVLEMMDRPQPVSRELERDLERLRQLNRWFGSHYLVC
                     TFIRRWIMPGAQMRVVDLATGSGDIPRLLVDHARKIGAQIEIDAVDQQAATLEIARKL
                     SIGYPEISYHEA"
BASE COUNT          572 a          673 c          732 g          514 t
ORIGIN      
        1 tacaccggga ttgtccgcgg caaaaacatt atcactggag tcgctctggt agaagtgtac
       61 gatctggatt agtaagtgct agaaatagcc taccggctac tttccgcgcg caggaagcga
      121 acgattaggt gccgagtcga aacaatctta ctatccgcgt gaagctctga taggcggcca
      181 gctactgaca gtgtcattgt tatggtcgtt gccaggctgg ccggatgata ggaagtcacg
      241 ccagcgaaca aggctccacc actccaaaga cccctcaatg acgttcgcat ctggacgatc
      301 atgctcgcgt tggaaaccgc gcttgcgcac ttcttgatta cacgttcgcg tgacatcact
      361 ttacatgagt cctaagctgg accctctgcg aagaattgcg cagtctgcat gacaagctga
      421 ctattgcgca ggccagaata cacatagagt cacgaaaatg aacgccctgc ttgagccgcc
      481 gccaaaacga ggaataggct gtttcggaaa aggctgcctg ttcctaatcg tacttgcgat
      541 cctcttcgtc gtggtagggg ttggcggaac atattggggg ctacgtcacg tctatctgtc
      601 taataaaccg gcaccgatcc ctgaaacttc tgcatccagc gaaactgcag ccgccacgcc
      661 tggcgaaact agcatgaccg cgccgagcaa aaaaagcgcc gaggttcgca aacgcttcga
      721 tacgatgaaa aaagcggccc gcgctcacga gcaaaccgag gtggagttga ccgccgcgga
      781 catcaacgcg ctgatagcgg ccaatcggaa atcgcgtggc acagcttctg ttggcatcaa
      841 tgacaccgtc ctgcaggccc agttctccat tccgctggaa agactggacg tcccatttcg
      901 gagcgcattt ggtctgagtg atcggtattt gaacgccgct gtcacgatag tggcgccgcc
      961 gggaaccaac gcgaccagcg tgcagttgag cgaggtgaca ctcaacggcc atggaattcc
     1021 cgccggtctg ctggactggg gattaccggg agtggggcga tcgctgcgaa gttacgtgat
     1081 caaatatgcc aaccagtacg gagtaaccga tggcgaaatc agggacggca aggtaatctt
     1141 gcgcactcgc ggccattaat gcaccacgac ggcagtatgc acgggaccga attttctctc
     1201 gcgaacgcgc cgatttctcg ctagcaatac cctgtaaata tcgccgtcat gttgagcgaa
     1261 gcgaaacatc tctggtattg tctggtcacc cgaacggcgc ggagatgatc cgagattctt
     1321 cgcttcgctc agaatgacat tagtaacatg accaagcgcg acgaaaatct ctggcagggg
     1381 atcgaccctg gtgcacaaga cgcactcagc cctcgtgatt atcgtacggc atcattcgcg
     1441 caggaattgg cacaacgagg cgtggacgcg ggcgaactcg tagccgccga caagaaccag
     1501 cgcgagattc aggaagcttg gatacccggc gtggaaattt tcgcgcgaaa aattcacccg
     1561 cagcgtcatc gtggctgctt cggggaattt gtgcgacgcg acgaagggat tctcgctcgg
     1621 attggcctgt ggccgaagca atggtcggct gcgcggatgt tcgcgtacac agcgaaaggt
     1681 tttcacgtgc atccgccgag tgtgccggaa ggcagcgctg cggcggattg gcttcgccgc
     1741 ttgttcgccg atgaaccgga aaactattcg ctgcgccgtt acgatgacga gcaatgggac
     1801 gtgatgttct ttttgcaggg acgcgttgag atgattttgt gcgacatccg ggcaggattg
     1861 ccgcggcggg tgatgcgatt cttcgtcgag ggtgacaatc atcgcggcag caacaacgtc
     1921 ggcgttgtga ttcctgcggg tgtggcgcac gcgcttcgcg ccgaaggagg agaagatgtc
     1981 atcatggttt acgggacaag cacgagtttc caacccgaat tcgagggacg catcgcgagc
     2041 gacgtagaaa acgccgagtt gccggaatcc tggcagaagt tcctgggtag gggcgactga
     2101 cctcaatcgc cccaaggcgg ttcgggtgaa ccgcccctac cttaatctga tgaagcgcag
     2161 cttcgatccg gccgttctgg aaatgatgga ccggccgcaa ccggtttcgc gcgagttgga
     2221 gcgggatctt gaacggcttc gacaacttaa tcgctggttc ggcagccact atctcgtttg
     2281 cactttcatt cggcgctgga taatgcccgg cgcgcaaatg cgcgtggtcg atcttgccac
     2341 gggttccggc gatattccgc ggttgctcgt ggatcacgcg cgaaagattg gcgcgcaaat
     2401 cgagattgat gcagtcgatc agcaggctgc aacgctggaa atcgcccgga aattgagcat
     2461 cggctacccg gaaatttcct accacgaagc a
//
LOCUS       DATDAJ010000099         3703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_607499, whole genome shotgun sequence.
ACCESSION   DATDAJ010000099 DATDAJ010000000
VERSION     DATDAJ010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607499"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VIS53_02345"
     CDS             complement(<1..402)
                     /locus_tag="VIS53_02345"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF013398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEY5766656.1"
                     /translation="MIQRRNSNLDLEERLMRERNRLEEKDLDRIANAYRELLDTIGED
                     VDREGLRRTPDRAARALEFLTQGYRQDLEEIINGAVFESPASEIILVKDIELYSMCEH
                     HLLPFIGRAHVAYIPNGKVIGLSKVARIVDVF"
     gene            complement(539..1723)
                     /locus_tag="VIS53_02350"
     CDS             complement(539..1723)
                     /locus_tag="VIS53_02350"
                     /inference="COORDINATES: protein motif:HMM:NF042789.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HEY5766657.1"
                     /translation="MPYYQKLGEIPRKHHIWFHRNGAGPGYKNEGIYYEHVVTTEGFN
                     EAFSIMYHLRPPTRVRNVKLLKCEELKKATDSPLRHHHLKTADIRRKGDLYTGRVPIL
                     FNQDVIAYRARPEKAYDKFQYYRNGGADEIIFVFKGGGTLESVFGKQRYRAEDYIVIP
                     RGITYRLVPDNVEEEDYLILESVGPVRIPHRYLNKEGQIKMGSPYSERDLHGPTEPLA
                     IDRDEDTEILVKDGPRWTQVTMAHHPFDVVGWDGYVYPFTFNAQDFEPITGTVHQPPP
                     IHQTFEIRGYVVCTFAPRMLDTHPEAVRIPWVHDNVEADEVLFYVRGNFGSRRGIEPA
                     SITLHPRGIPHGPHPGTIIASKNATRTEELAVMFDTEHTLELTEQAVALDDQKYPQSW
                     LD"
     gene            complement(1851..2990)
                     /gene="hppD"
                     /locus_tag="VIS53_02355"
     CDS             complement(1851..2990)
                     /gene="hppD"
                     /locus_tag="VIS53_02355"
                     /EC_number="1.13.11.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR01263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003868 - 4-hydroxyphenylpyruvate
                     dioxygenase activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylpyruvate dioxygenase"
                     /protein_id="HEY5766658.1"
                     /translation="MPTTIAAPKTKTTPAMQEDFLPLEGTDHIEFYVGNAKQAAHFYQ
                     SALGFQPVAYSGPETGVRERASYVVRQNKITFVLTTPLRAKHAISDHILKHGDGVKAI
                     ALKVKDATSAWKETTKRGGKSYMEPKTLKDEHGKIVLSGIHIYGEVVHVFVERDDYTG
                     PFMPTFVKWEPSFRAAETGLQYVDHCVGNVGWNQMNPWVKFYEEVMGFRNILTFDDKD
                     ISTEYSALMSKVMSNGNGFVKFPINEPAEGKKKSQVEEYLDFYDGEGVQHIAMATNNI
                     IETVTHLQNRGLEFLKVPSTYYDTLLDRVGHIDEELKALKGLGILVDRDDEGYLLQIF
                     SKPVEDRPTLFFEIIQRKGAKSFGKGNFKALFEAIEREQAARGNL"
     gene            3221..>3703
                     /locus_tag="VIS53_02360"
     CDS             3221..>3703
                     /locus_tag="VIS53_02360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766659.1"
                     /translation="MRNRVVAVLSVTLTIAVFFRAGPLVAQESEVSESLQDTTEFYGP
                     PISPAIYLVNFLLLYMVNPSVAANMPAYKAPIPKAVVACLEQNPSGCPYAAFEHLFDK
                     QTSRNRRLQPNKCFWPVECQLEGKFVRLAPHRARRGKQINKPLGIERAAQLARALGMD
                     E"
BASE COUNT          801 a         1037 c          947 g          918 t
ORIGIN      
        1 gaacacatcc acaatacgcg ccaccttgga aaggccgatc actttgccgt ttgggatgta
       61 agccacatgc gctcggccga tgaaaggaag cagatgatgc tcgcacatcg aataaagctc
      121 gatgtctttg accagaatga tctcgctcgc aggagattca aaaactgcgc cattgatgat
      181 ctcctccaag tcctgccggt aaccttgtgt gaggaattca agggcgcgcg cggcacgatc
      241 cggtgttcgt cgcaggcctt cgcgatcgac gtcctcgcct atcgtatcga gcagttcgcg
      301 atatgcgttg gcgattcggt cgagatcctt ttcctccaag cgattccttt cacgcatgag
      361 tcgttcttca agatcgagat tggaattgcg gcgttgaatc ataaggtgtt actgaaagta
      421 atccggtgta cgcaccatca caaatgggcc gtcatgtcga gcgaagtcga gacatccggc
      481 cggccgcatc agggttatgc catgggattc ctcgacttcg ctcggaatga caaggtcttt
      541 aatccagcca gctctgcgga tatttttggt cgtcgagcgc aacagcttgc tcggtaagct
      601 cgagtgtatg ttccgtgtcg aacatcaccg ccagctcttc tgttcgcgta gcattcttgc
      661 tcgcgatgat cgtgccggga tgcggcccgt gcggaatccc gcgcggatgc agcgtgatcg
      721 aagctggttc aatcccgcga cgcgatccga aattgccgcg gacgtaaaac agaacttcat
      781 cggcctcgac gttgtcgtgc acccacggga ttctgacggc ttcgggatgc gtatcgagca
      841 tacgcggcgc aaaggtgcaa acgacgtaac cgcgaatctc gaatgtctga tggatcggcg
      901 gcggttgatg gaccgtgcca gtgatcggct cgaagtcctg cgcattaaac gtgaacggat
      961 aaacgtagcc atcccagccg acgacatcga atggatgatg cgccattgtc acctgcgtcc
     1021 agcgcgggcc gtccttcact aaaatttcgg tatcttcatc cctgtcgatc gccagcggtt
     1081 ctgttgggcc atggagatcg cgctccgagt aaggcgagcc cattttgatc tggccctctt
     1141 tgtttagata acggtgcgga attcggaccg ggccgaccga ttccagaatt aaataatctt
     1201 cctcctcaac attgtcgggt acgaggcggt acgtgatgcc gcgcggaatc acaatgtaat
     1261 cttcagcacg gtatcgctgt ttaccgaaaa cggactcgag tgtgccgccg cctttgaata
     1321 cgaatatgat ctcgtccgcg ccgccgttgc gataatattg aaatttgtcg taagcttttt
     1381 cagggcgcgc gcgatacgcg atcacgtcct ggttaaacaa aatcggaacg cggccggtgt
     1441 agagatctcc tttgcgacga atgtcggccg ttttcaaatg atggtgccgc aaggggctgt
     1501 cggtggcttt ctttagctcc tcgcacttca ggagcttcac gttacggacc cgtgtgggcg
     1561 gccgcagatg atacatgatt gaaaacgcct cgttgaaacc ttcggtcgta actacgtgct
     1621 cgtagtagat gccttcgttc ttgtaacccg gtccagcgcc gttgcggtgg aaccagatgt
     1681 ggtgctttcg cggtatttcg ccaagttttt ggtagtacgg catgatcgat cctcctttgt
     1741 ttaggttgtc attctgagcg gagcgaagaa tctctgatca ttcgcttctc tcgcgtatgc
     1801 tctctgccaa gagacaatct gagatgtttc gcttcgctca acatgacaaa ttacaaattt
     1861 cctctcgccg cttgctctcg ttcgatggcc tcgaacaacg ctttgaaatt gcctttcccg
     1921 aagctcttcg cgcctttgcg ttgaatgatc tcgaaaaaga gcgtcgggcg atcttccacc
     1981 ggcttggaaa aaatctggag cagataacct tcatcatcgc gatcgaccaa tatcccgagt
     2041 cccttcaacg ctttcagttc ttcgtcgatg tgacccacgc gatcgagcag ggtatcgtaa
     2101 taagtcgaag gcactttcag aaactcgagc ccgcgattct gaagatgggt caccgtttca
     2161 atgatgttgt tcgtcgccat cgcgatgtgc tgcacgcctt cgccatcata aaagtcgagg
     2221 tattcttcca cctgcgattt ctttttgcct tcagctggct cgttaatcgg aaatttcaca
     2281 aatccgtttc cgttactcat caccttgctc atcaacgcgg agtactcagt cgaaatgtct
     2341 ttatcgtcga aggtaagaat gttgcggaag cccatcactt cctcataaaa cttcacccac
     2401 gggttcatct gattccatcc tacgttgccg acgcagtgat ccacgtactg cagcccagtt
     2461 tccgccgcgc ggaacgacgg ctcccatttc acaaacgtcg gcatgaacgg tcccgtgtaa
     2521 tcatcgcgct cgacaaacac gtgaacgact tcgccgtaaa tatggatccc gctcagaacg
     2581 attttgccgt gctcgtcctt gagcgttttc ggttccatgt aacttttgcc cccgcgcttc
     2641 gtggtctctt tccaggcaga agtcgcatcc ttcactttca acgcgatcgc tttcactcca
     2701 tcgccatgct taagaatgtg atcagaaatt gcgtgtttcg cgcgaagcgg tgtggtcaac
     2761 acaaacgtga tcttgttctg ccgaaccacg tagctggcgc gctctcgcac cccggtttcg
     2821 ggtccgctat aggccaccgg ctgaaaaccg agcgcgcttt gataaaaatg cgccgcctgc
     2881 ttggcgttac caacgtaaaa ctcgatgtga tccgtccctt ctagcggcaa aaaatcttcc
     2941 tgcatcgccg gagttgtttt ggtttttgga gcagcaattg tcgttggcat aatgacctcc
     3001 taactctctc gcgccgagcg cgcgttctaa atataagatc ggcggtcacc tctcgcaagg
     3061 ttgcgcatgc ctgccaactc acgcttgtca ttccgagagc gatgacgtgc attacgcgcc
     3121 gtccgcatcc gagagcagct gtccgctccc cggagtgcag agcagcttga ccgaggccgt
     3181 tgcgcctgat atacggtcgc gcctcgaaat aaataccttc atgcgaaatc gagtcgtagc
     3241 agttctatcc gtaacactaa ctatcgcggt tttcttccgg gcgggtccgt tggtcgcaca
     3301 ggaatcggaa gtttccgaga gtcttcagga caccacggaa ttctacggac caccgataag
     3361 cccggccata tacctggtaa atttcctgct tctatacatg gtgaatccta gcgttgccgc
     3421 caacatgccg gcatacaagg cgcccattcc taaagcggtc gtcgcttgcc tggaacaaaa
     3481 tccaagcggc tgcccctacg cagctttcga gcacttgttc gacaaacaga cttcccgcaa
     3541 ccgacgcctt caacctaaca agtgcttttg gccggtcgaa tgtcagctgg aaggcaaatt
     3601 tgtgcgcctc gccccgcata gagcgagacg cggtaaacag atcaacaagc cactaggcat
     3661 tgagcgggct gcgcagctgg ctcgagcttt gggcatggat gaa
//
LOCUS       DATDAJ010000100         4260 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_620886, whole genome shotgun sequence.
ACCESSION   DATDAJ010000100 DATDAJ010000000
VERSION     DATDAJ010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4260
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_620886"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1215)
                     /locus_tag="VIS53_02365"
     CDS             complement(<1..1215)
                     /locus_tag="VIS53_02365"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY5766660.1"
                     /translation="MTPPLYIALRFLTHRKRALLLSLSGVVFGVAIFICTQAQTQGFS
                     RYFIESNIGSNGALVVRSRFRPRYEPLMVAAKNSKTTTGRRLYFEGITNPNEIMRVSR
                     QFPDVISCSPVLRGTVSARAGFENATVDLYGIDPALHARTTDIVHQLIDGSFDDFRNN
                     TSAIIIGSRLADLLQTSVGDTVQLLAPNGEYWRFNIAAIARAGIGSIDSTRIYSHAKI
                     AQALLQQPSGATMIIYKLRDRNRAPVLARRFEALFQHNALSWQEREESTLQLFLTLRM
                     SVAITVSLIILLAGFGIFNVLTMSVLAKIKEIAILRSMGYRRTDIGAIFLWQGALIAA
                     AGSVLGCVLGALMTWGVSHIPIRLRGLLYTNYFLVTWDWRHYAFATLLALLAVFIASY
                     VPARRAAELPPVV"
     gene            complement(1212..2471)
                     /locus_tag="VIS53_02370"
     CDS             complement(1212..2471)
                     /locus_tag="VIS53_02370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5766661.1"
                     /translation="MISKVYEQDETSTATAGHERIANNRSGHQTSSPKLKLPESKTVL
                     WIGAAAIVLLFALAYFFLMPVAEVTTVQRGTAISAVYGTVRIEPAFVVRVRAQNDGFI
                     RLAESFSAGRGAIGKGVQRGELLATVADEETSRQLKQARTDLQAAVDRAALPLPSSEL
                     LKTAEDNLQRLEKVVSSGNVPAVEYQKSKNEVNRLRGAVETERIERDRNLKSLEETAK
                     KLEAEMKNAEVRSPIEGILTNVQTIDGELVSDGNELFTVSSRKTYVRGEVNEEDVGEV
                     QPGMKAKVQLYAYRTRTFTGGVTSIQPAADPTTQRYTVVLEMENPPDNMMVGMTGEMN
                     IITGVHENALLVPTRALLVDQALVVNGGIVQRRTVTVGFRTLDFSEALSGLADGDHVI
                     VSDQDKFHSGQPVRQRMINAPPPPKAP"
     gene            complement(2581..4029)
                     /locus_tag="VIS53_02375"
     CDS             complement(2581..4029)
                     /locus_tag="VIS53_02375"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5766662.1"
                     /translation="MRLPLKLTAKSVAVALWATRRACVERMGRALPTGKRLQPGASVN
                     LFILILIASFAHPTRAVTLQEALRTTLERNPAILEAKAGLEQAAGKRLVFRSIVWPDF
                     DVGVPAGLQYGHRAGESGAKGFAVGRGNLEQTLFNMAVPPSLRRGDIEVLIAQQQLNV
                     AVVEQLHAARLAFYAALYNRSLKSIRDEQRQKLEENVATQKNRFEAGLADRSAFTSAT
                     VQADELVPQSEAAQRAYREAQLNLAQAMGIDPANSSLPEPDGELEFVPMHIDVAAETA
                     AALQRRVDLKLARLFVRAANEDQRIIAADYYPRLVGSVHGEWVPVSGIHRQESTSKTQ
                     DFIGSEVREKAAYTWRVIDNGKVGGAMLRARAAREENELTCRKLESNVSRELSRIANH
                     VEAIVAREKSLASASTAAEESARTVRENVATGLISSLEYRVSQTAFLTTKSGLLEAIY
                     QHNVAAAEWDRAAGRYFQFSYETRKPGSEADK"
     gene            complement(4026..>4260)
                     /locus_tag="VIS53_02380"
     CDS             complement(4026..>4260)
                     /locus_tag="VIS53_02380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766663.1"
                     /translation="GTQLDVLQAAADVTRTRTTRLSAIYLHNVALARLTRACASSAEA
                     LNFRSDVKDVKNETRNATHAADVAKPPEKMTQR"
BASE COUNT          916 a         1183 c         1168 g          993 t
ORIGIN      
        1 gaccactggt ggcaactcag cggcgcgccg tgccgggaca taactggcga tgaacacggc
       61 cagaagcgcg agtaacgtcg caaacgcata atggcgccaa tcccacgtca ccaaaaaata
      121 atttgtgtag agcaacccgc gcagacgaat gggaatgtgc gatacacccc aggtcatcaa
      181 cgcgccgagc acgcaaccga gcaccgatcc agccgcagcg atcaaagcgc cctgccaaag
      241 gaagattgca ccgatgtctg tgcggcggta ccccatggaa cgcaaaatcg cgatctcttt
      301 aattttcgcg aggaccgaca tcgtaaggac attaaaaatt ccgaagccgg ccagtagaat
      361 gataagcgaa actgtaatcg caacggacat tcgcaaggtt aaaaaaagct gaagcgtgct
      421 ctcctcgcgt tcctgccagc tgagagcatt atgctggaaa agcgcttcga atcgcctggc
      481 caacaccggt gcacgattcc ggtcgcgcag tttgtagatg atcatggtcg ctccagaggg
      541 ctgttgcagc aacgcctgtg caatcttggc gtgcgagtaa atacgagtcg aatctatcga
      601 gccaatccct gcacgtgcga tcgctgcaat gttgaatcgc cagtactcac cattaggggc
      661 gagcaattgc acagtgtcac cgacgctagt ctgaaggaga tctgccaggc gcgaaccgat
      721 aatgatggcg ctggtgttat tccgaaagtc gtcaaagctg ccgtcaatca attggtgcac
      781 gatatctgta gttcgtgcat gcagggcggg atcgatgccg taaagatcga cagtcgcatt
      841 ctcaaatccc gcgcgggcgc ttacggttcc gcgcagaact ggtgaacacg aaatgacgtc
      901 ggggaattgc ctgctcaccc gcatgatttc gttgggattg gtgatgcctt caaaatagag
      961 acggcggcca gtggtcgtct tggaattctt cgcggcgacc atgagcggct catatcgcgg
     1021 cctaaaacgg gacctgacga cgagcgcgcc attgctgccg atgttggact cgatgaaata
     1081 gcgagagaag ccctgcgtct gcgcctgcgt gcagatgaag attgcgacgc cgaagacgac
     1141 gccgctcaaa ctcaaaagca atgcccgctt gcgatgcgtt aaaaaacgca gggcaatgta
     1201 aagcgggggt gtcacggcgc tttcggtgga ggcggcgcgt tgatcatgcg ctggcgcacc
     1261 ggctggccgg aatgaaactt atcctgatcg gaaacgatta cgtgatcgcc gtctgccaga
     1321 ccgctgagcg cctcggaaaa atccagagtg cgaaatccta cagtgacggt tcgtcgctgc
     1381 acaattcctc catttactac cagcgcttga tcgacgagca gcgcgcgtgt tggcacgagc
     1441 agggcatttt cgtgcacgcc ggtaatgatg ttcatttccc cagtcattcc gaccatcatg
     1501 ttgtcgggcg gattttccat ttccaacaca acggtatagc gctgggtggt tggatcggct
     1561 gcgggctgga ttgacgtgac gccccccgtg aacgtgcgtg tgcggtaggc gtacaattgg
     1621 acctttgctt tcattcccgg ttgtacttcg cctacgtcct cctcattgac ttcgccgcgt
     1681 acataagtct ttcgcgaaga gacggtgaaa agttcattcc cgtccgagac cagttcgcca
     1741 tcgattgtct gaacattggt tagaattcct tcaatcggcg agcggacttc agcattcttc
     1801 atttccgctt cgagcttctt cgcagtttct tcaagagact tgagattgcg atcccgttcg
     1861 atgcgctctg tctccaccgc gccgcgtaaa cggtttacct cgttcttgga tttctgatac
     1921 tcaacagcgg gcacgttccc tgaggaaaca actttttcga gccgttgtag attgtcctcc
     1981 gctgttttga gcaactccga agacgggaga ggaagagccg cgcggtcaac ggctgcctgc
     2041 aaatcggtac gtgcttgttt taattgtctg gaggtttctt cgtcagcaac agttgctagt
     2101 aattcgcccc tttgaacgcc tttgccgata gcgccgcggc cggcggagaa agattcggcc
     2161 agccgaataa acccatcgtt ttgcgcccgc acacgcacca caaacgcggg ttcgatccgc
     2221 accgtcccgt aaaccgccga gatggccgtc cctcgctgaa ctgtcgtcac ttccgcgact
     2281 ggcatcagaa aaaaatatgc gagcgcaaaa aggagcacga tcgccgctgc gcctatccac
     2341 aaaacggttt ttgattccgg caatttcaat tttggagaac tagtctgatg tccactccgg
     2401 ttgtttgcaa tacgctcgtg cccggcagta gccgtacttg tttcgtcttg ttcgtagacc
     2461 ttcgagatca ttattgccaa gacactgcag ccaagatatc cgttcgatca gcagccttca
     2521 ggaatgacgg cttccctgct gccaaatctg tcggttcttg tgaagccctt ggcgattcga
     2581 ctacttatcc gcttccgagc ccggtttgcg agtttcgtat gaaaattgaa aataccggcc
     2641 ggctgcgcgg tcccattctg cggctgcgac gttgtgctga taaatagcct cgagcaagcc
     2701 actcttggtc gtcagaaaag cggtttgact cactcggtac tcaagcgacg agattagacc
     2761 ggttgcaaca ttttcccgaa cagtgcgggc actctcctct gcagcagtcg acgcggacgc
     2821 gagcgatttt tcgcgggcaa cgattgcttc aacgtggttg gcgatccgcg agagctcgcg
     2881 gctcacattc gattccaatt tcctgcatgt cagttcgttt tcttcccgcg ctgctcgtgc
     2941 cctcagcatc gcgcccccga cttttccgtt gtcaatgaca cgccaggtgt atgccgcctt
     3001 ttcacgaact tctgacccaa tgaaatcctg tgtcttgctt gtcgattcct gtcgatgaat
     3061 tccactgacc ggaacccatt ccccgtggac gcttcccacg agcctgggat aatagtcagc
     3121 tgcaataatg cgttgatctt catttgcagc gcgcacaaac aagcgggcga gtttgagatc
     3181 gaccctgcgc tgtaaagctg ctgctgtttc ggcagcgaca tcgatatgca ttgggacaaa
     3241 ctccagctcg ccatccggtt ccggcagcga tgagtttgca gggtcgatac ccattgcttg
     3301 cgccaaattc aattgcgctt cgcgataggc gcgctgcgcg gcttcacttt gtggaaccag
     3361 ttcgtcggct tggacagttg cgcttgtgaa tgcgcttcga tcggctaacc cggcttcgaa
     3421 ccgatttttc tgagtagcaa cgttttcttc taatttctgt cgctgttcgt ctcgaattga
     3481 tttcagcgat cggttgtaaa gcgccgcata aaacgcgagc cgggcggcgt gcaactgttc
     3541 aaccacagcc acatttagtt gctgttgggc gattagaacc tcaatgtctc cacgccgaag
     3601 cgacggcggc acagccatat tgaacaacgt ctgttccaaa ttcccgcgac ccacggcaaa
     3661 tccttttgct ccgctctcgc cggcccggtg gccatattga agacctgcgg ggacgccaac
     3721 gtcgaagtcg ggccagacga tggagcgaaa gaccaaacgc ttcccggcag cttgttccag
     3781 accggctttg gcctcgagta tggcgggatt tctttcgagc gtggtgcgga gggcctcttg
     3841 gagagtgacc gcccttgtcg ggtgcgcgaa ggaggcgatc agaattagaa tgaaaagatt
     3901 aacgctcgct cctggctgta gccgcttccc tgtgggaagc gcacggccca tgcgttcaac
     3961 acatgcgcgt cgcgtcgccc atagggcgac ggctacagat ttggccgtca attttaatgg
     4021 tagcctcatc gttgagtcat tttttccggc ggcttagcga cgtcggcagc gtgcgtagcg
     4081 ttacgagttt cgtttttcac gtctttgacg tcggatcgga aattgagcgc ttcggccgaa
     4141 ctggcgcagg cgcgagtaag gcgggcgaga gcgacgttgt gcaaatagat cgcgctcaat
     4201 cgggttgtgc gcgtacgggt gacgtcggcg gctgcttgca gcacatcaag ttgtgttccc
//
LOCUS       DATDAJ010000101         2346 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_621351, whole genome shotgun sequence.
ACCESSION   DATDAJ010000101 DATDAJ010000000
VERSION     DATDAJ010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_621351"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VIS53_02385"
     CDS             complement(<1..466)
                     /locus_tag="VIS53_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766664.1"
                     /translation="MSEPKVAKASQTEFDRLQKKLVPLWKSIERFNQDPQTIVVVPSM
                     SIDAIDSGAVIQAYEERFLFLLLLLRQPRARLIYVTSRTILPSIIDYYLDLLPGVIPS
                     HARQRLFLPSPMDGSVRPLSEKLLERPRLIERIRSLIMDPDRAHLVPFNTTNR"
     gene            complement(677..1891)
                     /locus_tag="VIS53_02390"
     CDS             complement(677..1891)
                     /locus_tag="VIS53_02390"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5766665.1"
                     /translation="MSFNRFGLLPQVVRGTQAMGFVEPTPIQLRAFPIVLGGKDLIGT
                     AQTGTGKTAAFALPILTLLAKHGDFRCLVLEPTRELAAQVETAFRDYGRFTDLRVALV
                     HGGVGYGKQREELKRGVDILVATPGRLLDLLEQRTMSLREIKILVLDEVDRMLDMGFL
                     PDVRRIVEKISTKRQTLLFSATLPPEIERLSAWVLRDPELVEIGVRRSPAETVTHAVY
                     PVAAEQKFDLLMALLERTNFDSALIFCRTKYGADRIAHQLKQGKHAVAVLHSNRTQRE
                     RVEALEGFKSGKYEVMVATDIASRGLDIAGVSHVINYDVPEHPEDYVHRIGRTGRAQN
                     VGDAFTLLSGQELPALQAIERFIGQKIPRLKLENFSYLYTALFESESATSGRRTIGGG
                     RTHRGYSFGRRR"
BASE COUNT          582 a          658 c          606 g          500 t
ORIGIN      
        1 cccggttcgt ggtgttaaac ggaacaagat gcgcccgatc aggatccatg attagcgagc
       61 gaatacgctc gatcagccgt ggccgctcca aaagtttctc actgagtggg cgcactgaac
      121 cgtccatggg tgaaggcagg aaaagccgct gccgcgcatg gcttggaatg acgcccggaa
      181 gaagatcgag gtaataatcg atgatgctcg gcagaatcgt tcgcgacgtc acgtagatca
      241 ggcgcgcccg cggctggcgc agcagcagta acagaaatag gaaccgttcc tcgtatgcct
      301 ggatcactgc gcccgaatca atcgcgtcga tcgacatcga aggtacgacc acgatcgttt
      361 gcgggtcctg gttgaatcgc tcgatcgatt tccacaacgg caccagcttc ttctgcaacc
      421 gatcaaactc ggtctgtgaa gccttagcga ctttgggttc ggacataagg gcgctattaa
      481 acctcatctc ccaaacaaat cgagcgattt gggatgtaat tggaggtcag gcttccagcc
      541 tgactcagcc cggcgggcat cttgcctgcc gaactccata aacgacaagc tgggaagctc
      601 gtcgtcctag ataggcagga tgcctatctt ccaacctgat agcggcacgc ggccttccaa
      661 cagccagaaa tctgagttac cgcctgcgcc cgaatgaata tccgcgatga gttcttccgc
      721 cacctattgt gcgccggccg cttgtggctg attccgactc gaagagtgcc gtgtataggt
      781 aggagaaatt ttccaatttc aatcgcggaa ttttctggcc gatgaaacgt tcaatcgcct
      841 gcaacgcggg caactcctgg ccgctcagaa gtgtgaaggc gtcgccaaca ttttgcgccc
      901 gtcccgtgcg cccgatccga tggacgtaat cttcgggatg ctcgggcaca tcgtaattga
      961 tcacgtgact cacacctgcg atgtcgagtc cccgcgatgc aatatcggtc gccaccatca
     1021 cttcatattt gccgctcttg aagccttcga gcgcttcgac ccgttcccgc tgtgtccgat
     1081 tggaatgcaa caccgccacc gcgtgcttac cctgcttcaa ttggtgggct atccgatcgg
     1141 cgccgtactt ggttctgcag aaaatcagcg cgctgtcgaa attcgttcgc tcgagcaaag
     1201 ccattagcag atcgaatttt tgttcagcgg caaccggata aaccgcgtgg gtgactgttt
     1261 ccgcaggcga acggcgtacg ccaatttcca ctaactcagg atcgcgcagc acccatgccg
     1321 acaggcgttc gatctccggg ggcaacgtag ccgaaaacag caaagtttgt cgctttgttg
     1381 agattttctc aacgatccgg cgcacgtcgg gcagaaaacc catatccagc atccggtcca
     1441 cttcatcgag tacgagaatt tttatctccc ggagactcat cgtacgctgc tccagcagat
     1501 ccagcaggcg tccaggcgtg gcgacaagaa tatcgacgcc gcgcttgagt tcttcgcgtt
     1561 gtttcccgta accgacaccc ccgtgcacga gcgcgactcg caaatccgtg aagcggccat
     1621 aatcacgaaa tgccgtctca acttgcgcgg ccagttcacg cgtgggctcg agcacgagac
     1681 aacggaaatc cccgtgcttt gccagcaacg tcagaatagg taaagcaaac gcggcggtct
     1741 tgccggtgcc ggtttgcgcg gtgccgatca aatcctttcc gccaagtaca atgggaaacg
     1801 cgcgaagctg gatcggcgtc ggctccacaa atcccatggc ctgcgttcca cggacgacct
     1861 ggggcaaaag tccgaaacga ttaaatgaca tggcttttca aattacttgg aactcaacga
     1921 attaacacga atcggatatc atggcgaacg cggggccatt caaacttcgc gattcgtctc
     1981 tcattcgcgt cacgaaacta gataaagaaa attaaaaaaa actaaaaccc agcaacagct
     2041 gaggtgcgat cacgatcaaa ggcaagggaa ggaaatatgg ggaagggaaa tcgaaagctg
     2101 tcgccagctg taacagcgag tcacatcaat ggcggcaagt ctctttgggc aaacctaggg
     2161 gtttgaagcg acaaatttca atcctttcga ctaaggaaaa accaattcaa aggaggcaac
     2221 ctaaatgaaa aagcaaaaca atcgttctat caccgcacat tttatccgca gcctgttata
     2281 tgtgtttcta cttgtggccg tctgcgttat tccattcgca ctggcgcagc gaaacgcaaa
     2341 caatcg
//
LOCUS       DATDAJ010000102         3401 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_622592, whole genome shotgun sequence.
ACCESSION   DATDAJ010000102 DATDAJ010000000
VERSION     DATDAJ010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3401
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622592"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1410
                     /locus_tag="VIS53_02395"
     CDS             <1..1410
                     /locus_tag="VIS53_02395"
                     /inference="COORDINATES: protein motif:HMM:NF020048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEY5766666.1"
                     /translation="VRSEAESILLEGKLIKEYRPRYNVSFRDDKRFLVVRVDLSEEWP
                     RFRLARFQKNDGSRYFGPYAHAGALRQTLNFMRKRFGVLTFGRGAPTERELKSSTYQV
                     PVRLSETGAEQYRERVHQACEFLEGKSREMIVALEEQMHAAAEKMDFEKAAELRNMVA
                     DLRNTTRPTRRFTRGTLSSTIEPMVDVQALADALHLPDAPRVMECFDISNISTTHVVA
                     SMVCFRDGIPDKNNYRRYRVRTVKGQDDFASMAEVVRRRYSRILLEARAVNSDAAEFS
                     QENAADALARISSHPEQSEAKSRDPAAKPHRNATGFLDSARIDTNFVAVRLPDLIIVD
                     GGKGQLSAACRELQRLGLHDLPIIGLAKEHEEIYRPGRALPLRLPMDSPALRLLQRIR
                     DEAHRFANAYHQLLMKKRVEESILDDCPGVSQNRKSLLLQRFGSVNRLRRATVEEIAS
                     TEGIGRKLAEEVHRFLQRH"
     gene            1552..>3401
                     /gene="mrdA"
                     /locus_tag="VIS53_02400"
     CDS             1552..>3401
                     /gene="mrdA"
                     /locus_tag="VIS53_02400"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR03423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY5766667.1"
                     /translation="MSRTRICQNLRNLWIPFWLFALSPIADAQTLMPTPDPSPSAPPE
                     EETIVPTFETQKLARTFMLDVPAPRGQITDRNGVPLAQNRLSYNLGITFPTPLNFSDS
                     QALSYTREKIDDAGKLIGRRFRVSDEAILRHYRNRGIMPFEIAPNLTPQEYEGIKDKL
                     PSGMMVRPVYVRIYPNGKVAGQIVGYTGKTGRNPDGIVDNHETIWPQTEGREGLEQTF
                     NEMLTGKNGEYKLTFDKDGRKTSEKLVTPPEPGYNVVTTLDLHLQELAEKALAAKAKR
                     GAMVIVDPNSGDVLALASWPTYDPNVFVPSISPDQLKALQSDPDIPLLPRAYRSSYPP
                     GSTFKVAVGIAALESHAVYPQDQYQCVPAIQIGNVTFHNWKKSDRGALNFVQALTESC
                     DTWFYQAGIKTGSAPIIDWALKLGFGAKCGIPLRGEVEGRIPNDEYMKATHGRKILNG
                     DIANMSIGQGDIQTTPLQMAQAMAVVANGGTFYQTRLVQQVQTFDNQIVTAYQVRAKR
                     TLDMSPETLEQVRTGMIDVVNGGSGTAHQASLENIEVAGKTGTAQWGPKHKERTAAWF
                     AGFLPADQPRYAFAVVYEGDVGKSVHGGSHAAPMIAEVFKDVYKGQMIAG"
BASE COUNT          810 a          953 c          969 g          669 t
ORIGIN      
        1 gtccgcagcg aagcggaatc gattttgctc gagggcaaat tgatcaagga ataccggccg
       61 cgctataacg tttcgtttcg cgatgacaaa cggttcctcg tggtcagagt cgatctgtcg
      121 gaagagtggc cgcgctttcg cctggcccga ttccaaaaaa acgacggcag ccgctacttc
      181 ggcccatacg cccatgccgg cgcgttgcgg caaacactga atttcatgcg caagagattc
      241 ggcgtgctca cgtttgggcg cggcgcaccg acagagcgcg aattgaagtc ttcgacatat
      301 caagtgccgg tccgcttgag cgagaccggt gccgagcaat accgcgagcg cgtccatcaa
      361 gcgtgcgaat ttttggaagg caaatcgcga gagatgatcg tcgcgctaga ggaacaaatg
      421 cacgccgctg cggagaaaat ggatttcgag aaggctgccg agcttcgcaa catggtcgcg
      481 gacttgcgca atacgacaag accgacccgc cgattcacac gcggcacttt atccagcacc
      541 attgaaccga tggtggacgt gcaggcgctc gctgacgcac tgcatcttcc agatgcacct
      601 cgagtaatgg agtgtttcga catttcgaac atctccacga cacacgtggt ggcctcgatg
      661 gtttgtttcc gcgatggaat tcctgacaag aacaattatc gccgctatcg cgtgcgtacc
      721 gtgaagggac aggatgattt tgccagcatg gccgaggtcg tgcggcggag gtattcgcgg
      781 attctgcttg aagcccgagc cgtaaattcc gacgcagcgg aattttcgca ggagaacgcg
      841 gcggatgcct tggcgcgaat ttccagtcat cccgaacaaa gcgaagcgaa gtcgagggac
      901 cccgcggcga aaccgcaccg taacgcgacg ggattcctcg actccgctcg gattgacacg
      961 aactttgtcg cggttcgtct gcccgacctg atcattgtcg atggaggaaa agggcagctc
     1021 tcagccgcct gccgcgaatt gcagcggctg ggcttgcacg atcttccgat tatcggtctg
     1081 gcgaaagaac acgaggagat ttatcgacct ggccgtgcgt tgccgttgcg acttccaatg
     1141 gattctcctg cgctgcgatt gcttcagcgc attcgagacg aggcgcatcg gtttgccaac
     1201 gcctatcacc aactgctcat gaaaaaacga gtggaagaaa gtattctcga cgattgcccg
     1261 ggtgtgagtc agaaccggaa aagtttgttg ctacagcggt ttggctccgt aaatcggctc
     1321 cgccgggcaa ccgttgagga gatcgcatcc acggaaggca tcggccgaaa attggccgaa
     1381 gaagttcacc gctttttgca acggcattga tttgtccgca gtgtcgccga aattggctgt
     1441 cattccgagc cacgcaaagc cgagtcgagg aatcccgcgg aataacccca agagagtatc
     1501 atgatccctc gacttcgctc gggatgacag gcctaagttg ggattactta aatgagtcgc
     1561 actcgaatct gccaaaatct gcggaatctc tggattccgt tctggctatt tgccctgtcg
     1621 ccgatcgcgg acgcacagac gctcatgcca actcctgacc ccagtcccag cgctccgccg
     1681 gaagaggaga caattgtccc cacttttgag acgcaaaagc tggcgcgcac gtttatgctc
     1741 gacgttccgg cgccacgggg acagatcacc gaccgcaacg gggtgccgct ggcgcaaaac
     1801 cggctcagtt acaatctggg cataactttt ccgaccccgc tgaacttttc cgattcgcag
     1861 gcgcttagct atacgcgaga aaaaatagat gacgctggga agttaatagg acgcaggttc
     1921 cgggtttccg atgaggcgat ccttcgtcat taccgcaacc ggggcatcat gccatttgag
     1981 atcgcaccca acctcacgcc gcaggagtac gaagggatca aggataagct gccttccggc
     2041 atgatggtgc gacctgttta cgtccggatt tatccgaacg gaaaggttgc cggtcagatt
     2101 gttggttaca ctggaaaaac cggccgcaat cccgacggca ttgtcgataa ccacgaaacg
     2161 atctggccgc aaacggaggg acgcgaaggg ctcgaacaga cattcaacga gatgctgacc
     2221 gggaagaacg gcgaatacaa actgaccttc gacaaggatg gccggaaaac gtcggagaaa
     2281 ctggttaccc cgccggagcc cgggtacaac gtggtaacca ctcttgattt gcacctgcaa
     2341 gaactggccg aaaaagcgtt ggcagcaaaa gcaaaacgcg gcgccatggt aatcgtcgac
     2401 ccgaacagcg gcgatgttct ggcgctggcg tcctggccta catacgatcc aaacgttttc
     2461 gttccctcga tctcacccga tcaactcaaa gccttgcagt cggatccgga cattccgctt
     2521 ttgccgcgtg catatcggtc gtcctatcca ccgggatcga cattcaaggt agccgtgggc
     2581 attgcggcgc tggaaagcca tgccgtctac ccgcaggacc agtaccaatg cgtgcctgcg
     2641 attcagatcg gcaacgttac gttccacaac tggaaaaaga gcgatcgcgg tgcgctaaac
     2701 ttcgtgcagg cgctcacgga atcatgcgat acatggtttt atcaggccgg tataaagacc
     2761 ggctcggcgc cgattattga ttgggcgttg aagctgggct tcggcgccaa atgcggcatt
     2821 ccgctgcgcg gcgaagtaga aggccgcatt ccaaatgatg aatacatgaa agcgacgcac
     2881 ggtcgcaaaa tcctcaatgg cgacatcgca aacatgtcga tcggtcaggg cgacattcag
     2941 acaactccgt tgcagatggc acaggccatg gccgtcgttg ccaacggcgg aactttctat
     3001 cagacacggc tcgttcaaca agtgcagacc ttcgacaacc aaatcgtcac cgcctaccag
     3061 gtgcgcgcga aacgaacgct agatatgtcg ccagaaacgc tggagcaggt gcgcaccgga
     3121 atgatcgatg ttgtgaatgg cggcagcggc accgcgcatc aggccagcct cgaaaatatc
     3181 gaagtcgccg gtaaaaccgg caccgcccaa tggggaccaa aacacaaaga gcgcaccgcg
     3241 gcgtggttcg ctggattctt gcctgctgac caaccgcgat acgcgttcgc agtcgtttac
     3301 gaaggcgatg tcggcaagag cgtgcacggc ggttcacatg ccgcgccgat gatcgctgag
     3361 gtgtttaaag acgtgtacaa aggtcagatg atcgccggcc a
//
LOCUS       DATDAJ010000103         5420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_623957, whole genome shotgun sequence.
ACCESSION   DATDAJ010000103 DATDAJ010000000
VERSION     DATDAJ010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5420
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623957"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VIS53_02405"
     CDS             <1..927
                     /locus_tag="VIS53_02405"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5766668.1"
                     /translation="PVRSMNDLQAQLQAAFEFQRRGKAKRDTINTRHILFVVSGAFEK
                     LKEQVARRVRHGQIGFSAQPMQVMDNELFQHVTTQDFIEYGFEPEFIGRLPVRVVCEE
                     LDANDLFDIMKYSEGSLLRQYERAFRAYGIEISFEDEALRLLAQAAATEKTGARGLLT
                     VFEKLFRDYKFHLAGSGLTQLRASAALVREPQRVLEQLMAEGHKLEAQMLEAGAREFA
                     EKFSKEYGLELVLDESAFRRLVERAQAERMTMTDLCAHLFKDFQFGLSLIKKNTGRTQ
                     FVLNAAAIDAPDKFLSDLVVQSYYPTASAQNA"
     gene            934..2172
                     /locus_tag="VIS53_02410"
     CDS             934..2172
                     /locus_tag="VIS53_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766669.1"
                     /translation="MKRSLITTLIIGVAVALVVGALHATKVIAGFEAVAAQLVTDYAG
                     ATRVVGEKWQYVFVLLIALGVAWLSLSNVARWRAWLLIGLLLVELFGLAWVCSLYRVF
                     FQPTPAVLAVVFAVLVAEGWSVFLGRNRSHLIRTLFADRVSNEQFRRLNDRRISFDAE
                     PRTYDVSVVVCDIGNKLTFAEGGEPAAFTEATGKFIRETAARLVKEGAYLQAADGEGV
                     VGVFGFPASDREHTEKAVRVVLDLIKNSREQGEYKEKVAASRDIRAGISSGAIIAGAL
                     RESRRPLLLASGEPIDLARRFCALNRFYGSRALMDTATFDRVSEAVVARPIDFVSGLN
                     SHDRLEVYEPLWLAAEAGPERVAQRDSFWSGVVLYREKRWAEAYAEFQKARGSETEDD
                     AALEFYLRRLEPLILQLTHE"
     gene            2253..2858
                     /gene="recR"
                     /locus_tag="VIS53_02415"
     CDS             2253..2858
                     /gene="recR"
                     /locus_tag="VIS53_02415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEY5766670.1"
                     /translation="MRKSEYPAAIRDLIAQLRQMPGVGPRSAERIALWMVRARGDQPD
                     QIARAITDTRQSIYSCNLCGFFAAGEICEICADSSRSTDLLCVTEQPTDILPLEKTGA
                     FRGRYHALGGKISPLDHIAPEDLRIKELVDRIDREKISEIIFALPADVEGEATTNYIV
                     DLLKSKPVALTRIARGIPAGGGLESADELTLSAALSGRTKL"
     gene            complement(3540..3710)
                     /locus_tag="VIS53_02420"
     CDS             complement(3540..3710)
                     /locus_tag="VIS53_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766671.1"
                     /translation="MTKITPTASDVLKKERRLIARFGGLGFDVDMLVNDAESLFIVFI
                     VGGSHRCRRMTD"
     gene            3709..4146
                     /locus_tag="VIS53_02425"
     CDS             3709..4146
                     /locus_tag="VIS53_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766672.1"
                     /translation="MVAITQSALAQNLVRFSGGIGVSPTGSTTTTVRTVLAAGQIWVI
                     RDLAADVKQDGRIRLDGRGLLLGAGNGVGSNANQSVFATLFCANDGNVQHSSTLAGVP
                     LEVDGDFRIDDTLSPALPNPCTSPVLLIRSAGSGAWFAAGIPK"
     gene            complement(4523..4666)
                     /locus_tag="VIS53_02430"
     CDS             complement(4523..4666)
                     /locus_tag="VIS53_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766673.1"
                     /translation="MPKFWGRILVRSMPREARHALIGAALFAAVVLIIEFQGFLYPEA
                     FAR"
     gene            4889..>5420
                     /locus_tag="VIS53_02435"
     CDS             4889..>5420
                     /locus_tag="VIS53_02435"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEY5766674.1"
                     /translation="MSCAKIDPALHQAKKPPWIKVRLPSNPVFFSTKALISDLRLHTV
                     CESAQCPNRWECWSQGTATFMIAGDRCTRACGFCAVTTAKPFALEDDEAKRVAEAVRR
                     MNLKHVVITAVARDDLKDGGADHFARTITAIREMDPSIVIEVLVPDFHAQDWCIQTVL
                     KAGPDIYNHNVETVERL"
BASE COUNT         1222 a         1467 c         1542 g         1189 t
ORIGIN      
        1 ccggtgcgca gcatgaacga tctccaggcg caattgcaag cggcattcga atttcaacgg
       61 cgcggcaaag ccaaacgcga cacgatcaac acccgccaca ttctattcgt cgtcagcggc
      121 gcgtttgaaa agttgaaaga acaagtggcg cggcgtgttc gtcacggtca gatcggattc
      181 agcgcgcaac caatgcaagt gatggacaac gaattattcc agcacgtcac gactcaggac
      241 ttcatcgagt acgggttcga gccggaattc atcggacgtt tgcccgtgcg cgtcgtctgc
      301 gaggaactcg acgcgaacga cctattcgac atcatgaagt attccgaggg cagtttgctc
      361 cggcaatacg agcgtgcgtt tcgcgcctac ggaatcgaga tcagcttcga ggacgaagcg
      421 ttgcgtttgc tggcacaagc tgcagcgacg gaaaaaaccg gcgcgcgcgg gttgctgacc
      481 gtttttgaaa aattgtttcg agattacaaa ttccatctgg ccggttcggg gctgacccag
      541 ttgcgcgcaa gcgcggcgct ggtgcgggag ccgcaacgcg tcctcgaaca actaatggct
      601 gaaggacaca agctcgaggc gcaaatgctc gaagctggtg cgcgcgaatt cgcagagaaa
      661 ttcagcaagg agtatggatt agaacttgtt ttggacgaaa gcgcattccg tcgcctggtc
      721 gaacgcgcgc aagcggagcg gatgaccatg accgatctgt gcgcgcattt gttcaaggat
      781 ttccaattcg gattgagcct tatcaaaaag aacacgggcc gaacgcagtt tgttcttaat
      841 gctgcggcga tcgacgctcc ggacaaattt ctgagcgacc ttgtggtgca atcgtactac
      901 ccgactgcat cggcgcaaaa cgcctgattg cacatgaagc gttcgttgat cacaacgctc
      961 atcattggag tcgccgtggc gctagttgtt ggagcgctgc atgcgacgaa agtgatcgct
     1021 gggtttgagg ctgttgccgc gcagctcgtc accgattatg cgggcgcgac acgcgtcgtt
     1081 ggcgaaaaat ggcaatacgt cttcgtattg ctgatcgccc tcggcgtcgc ctggctcagc
     1141 ttgagcaacg ttgcgcgatg gcgcgcttgg ttattaatcg ggttattgct ggtggaactg
     1201 tttggcctcg cgtgggtttg ctctctttac cgcgtattct ttcagccgac gccagcagtc
     1261 ctggcggtcg tgtttgcagt cctcgtcgca gaagggtggt ctgttttttt aggcaggaac
     1321 cgctcacatc taatccgcac gttgtttgcc gatcgcgttt ccaacgagca atttcgccgt
     1381 cttaacgacc ggagaatatc gttcgatgct gagccaagga cgtacgatgt aagcgtcgtg
     1441 gtatgcgaca tcggcaacaa acttacattc gcggaaggtg gcgagcctgc cgcgttcact
     1501 gaggctacgg gaaaattcat ccgcgagacc gctgcacgtc tggtgaaaga aggtgcttat
     1561 ctgcaagccg ctgacggaga aggcgtggtc ggcgtttttg gatttcctgc gtccgaccgg
     1621 gaacacacgg aaaaagcagt gcgggttgtt ctcgatttga tcaagaattc tcgcgaacag
     1681 ggggaatata aggagaaggt cgcagccagc cgggacatcc gggccggaat cagctccggc
     1741 gcgatcattg ccggggcgtt acgggagagc cggcggccgc tgctcctggc gagcggcgaa
     1801 cccatcgacc tggcgcgcag attttgcgcg ctgaatcgtt tctacggatc cagggctctg
     1861 atggatacgg cgacttttga tcgagtgagc gaagcagtcg tcgcgcgtcc gattgatttt
     1921 gtgagcggac taaactcgca tgaccggctt gaagtttacg aaccgctttg gcttgcagct
     1981 gaagcgggac cagaacgcgt cgctcagcgc gactccttct ggagcggcgt agttctgtat
     2041 cgagagaaac gttgggcgga agcgtatgcc gaatttcaga aggcgcgcgg ctcggaaacc
     2101 gaagacgatg cggcgctgga attttatttg cgccggctgg agccgctcat cctgcaattg
     2161 acgcacgagt aaataaatgt agctcatgcg tctcgcttgt atccgaccga attgcaagcc
     2221 agaggcttgc actactttta cctgagcacg tgttgagaaa gagcgaatat ccggcggcga
     2281 tccgcgacct aattgcgcaa ctgcggcaaa tgccgggcgt cggtccgcgc tcagcggagc
     2341 ggattgcgct ttggatggtg cgcgctcggg gcgatcaacc ggaccaaatt gcgcgcgcca
     2401 tcacggacac gcgtcagtcg atctattcct gcaatttgtg cggattcttt gctgccggcg
     2461 aaatctgcga aatctgcgcc gactcatcgc gctcgacgga tctgctctgc gtcacggaac
     2521 aacctactga cattcttcct ctggaaaaaa cgggcgcatt tcgcggccga tatcatgccc
     2581 tcggcggcaa gatttcgccg ctcgaccata tcgcccccga agatttgcgc atcaaagaat
     2641 tggtggatcg catcgatcgg gaaaaaattt cggaaatcat ctttgcgctg cccgccgatg
     2701 tcgaaggtga agcgaccacg aattacatcg tcgacctttt gaagagcaaa ccggtcgcgc
     2761 tcacccgcat cgctcgcggg attccagccg gcggcggtct cgaatcagcc gatgaattga
     2821 cgctatccgc cgcgctgtcg ggcaggacga aactgtaacg cgccgtgatc ccgagttgcg
     2881 aagatcgcct cgcacctaac gagaatcgtc agtaatgaca ataatcccta ttgccagggc
     2941 tggcagtagc tgaatttcag attggcctga tcactgccat ccacagggct atacccaggc
     3001 caaacatgat gtgattgaac aggcttatgc gagccagatg agcatccccc gttgccctcc
     3061 aagaggtagc cgatccagcg tccgatcaaa tcaggaccgg ttcggcgcgg ccctcggccc
     3121 gcgatgccga gccggagagc gatcattgcc acgacgtcca tggtaacggt agcgagaata
     3181 cccacaatca ggccaacaac gaacgcacgg ctttccattg tagggcatct ccgcccttac
     3241 tgttaggctg ttgttcaacg aaaaagagat aagccgcggc aggcggagcc gagcttgctt
     3301 tcacttcatc cttcataatt tttcattcgt acttgccgcg cagcggccgt tggcttcatc
     3361 gactagttag ctcgttttgc gtgatcgaaa caacacgaaa acgggattcg cctgatcgat
     3421 tttgtcagtg tccgcgattt tctcgccgga ggaaatgccg aaccaaccta aggctgcgct
     3481 agtccccgaa aacgttcaat aatccagaga ttgagaaggt aactaaatcg taacttaatt
     3541 tagtcggtca ttcttcggca tcggtgcgat cctccaacta tgaacactat gaagagactc
     3601 tcagcgtcat taaccagcat gtcgacatca aatcccaaac cgccgaaacg cgctatcagt
     3661 cgccgttcct ttttaagcac gtcactcgct gtcggcgtaa ttttcgtcat ggtagccatt
     3721 actcaatcgg ccctggcaca gaacctggtc aggttcagtg gagggatcgg cgttagtccc
     3781 actggttcaa caaccaccac ggtgcgaacc gtcttagccg ctggccagat ctgggtgatc
     3841 cgggaccttg cagccgacgt gaagcaggac gggaggatcc gactcgacgg ccggggcctc
     3901 cttctgggcg caggcaatgg cgtcggaagc aacgccaacc agagcgtttt tgcgacgctg
     3961 ttctgcgcaa atgacgggaa tgtccaacac agctcaactc ttgcaggcgt cccgcttgaa
     4021 gtggatggcg attttcgcat tgacgacacg ctttcgcctg cgctcccgaa tccttgcact
     4081 agcccggtgc ttctcatccg gtccgctgga tccggagcgt ggttcgccgc cgggattccc
     4141 aagtgataaa caactataga gaggtgacgc atattattct tattaggcgt cgagggtagt
     4201 gggctacttt gatcaaagcg gcccactacc gcgtcgacgg aacatgacgc cacaaaacgc
     4261 gaggccaagc tcaaaaattc aagggccgtt ggctcatcga ctggttaggt ctgctcgtcg
     4321 agtctcgctc ggtctgtcct ccatccagat cgctgctgtc atcccagcgc aatgcgacca
     4381 gcatcacgcc gttcggttgg cctgtgtacg tccagcgaaa catccaagtt cccgctggcg
     4441 actcgtcacg tgtgggacta acgaacagct tggcgtctaa gtgccactcc ttgcaatgtg
     4501 ctcgcatgag acgtgaagtg cgtcagcgcg caaaagcttc tggatatagg aagccttgaa
     4561 actcgatgat gagcacgacc gcggcgaata atgcagcacc gatgagagca tgtcgtgctt
     4621 cgcgtggcat agacctaacg agaattcgac cccaaaattt gggcatttga agagaaatat
     4681 ccaaattttg ggtctaaccc gacttgagct tgcagtccaa gaggagaaat cgccggtacg
     4741 acgccgatgt tagcgtcgcc ggtggatcca gacaaaccga aattgttcga gtaggtgatg
     4801 cggacaacgc ggtcctgttg aagaattgag catggtaccc agcaatttaa cttttgtaac
     4861 gtttttaacg ttgtaacttt tcttcgaaat gtcctgcgcg aagattgatc cggcattgca
     4921 ccaggcgaag aaaccgcctt ggatcaaagt gcggttgccg tcgaatccgg ttttcttttc
     4981 gactaaagcg ctcatttccg atttgcggtt gcacacggtt tgcgaaagcg cgcaatgccc
     5041 gaatcgttgg gaatgctgga gccaggggac agccactttt atgatcgcgg gtgaccgttg
     5101 cacacgcgca tgcggatttt gcgcagtgac aacggcgaaa ccattcgcgt tggaagacga
     5161 cgaggcaaag cgcgtcgcgg aggcagtgcg ccggatgaat ttgaaacacg tggtgatcac
     5221 cgccgtcgcg cgcgacgatc tgaaagacgg cggcgcagat catttcgcgc gcacgatcac
     5281 cgctattcgc gagatggatc cttcaatcgt cattgaagtg ctcgttccgg attttcacgc
     5341 acaagattgg tgcatccaga cggtgctcaa ggctggcccc gacatttaca atcacaacgt
     5401 ggaaacggtc gaacggctca
//
LOCUS       DATDAJ010000104         9130 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_625424, whole genome shotgun sequence.
ACCESSION   DATDAJ010000104 DATDAJ010000000
VERSION     DATDAJ010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9130
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_625424"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VIS53_02440"
     CDS             complement(<1..381)
                     /locus_tag="VIS53_02440"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY5766675.1"
                     /translation="MIHKFFVAFIPIFVAIDAIGLVAVFMGLAGDTPREQRQREGFIA
                     IFTALCISVGFIFLGKIIFTALGITVSDFQVAGGLILLGLAGRELLNVAPASREATAD
                     FGVVPLGMPLIAGPALLTALLVLVD"
     gene            598..2673
                     /locus_tag="VIS53_02445"
     CDS             598..2673
                     /locus_tag="VIS53_02445"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEY5766676.1"
                     /translation="MKTVDDFRAAAAKAKAVLTIPDWEQTPEAVETGMKNAIAKANAS
                     LDQIGAQEPGKVTFKSTVVALDDLTYETGLAANRATLIKETNTNPAMRTAGENAVKAF
                     QDWAVGVDYREDVYKAIKAFADTHPKLSGEDEKLLKEMLRDYRRAGLELPPDKRKEVE
                     ELRKELTKLGTDFDTNIVKSNAPVMFSKADLDGLPESFFASPGIKTGDDVYTVMANVT
                     WQFNTVQENAKSEATRKQLYIVRETLAKDENVPLLNQMLALRNEIALRLGYKSWDDYQ
                     TEVKMAKTGMNAEKYINDLVTGIQPKFDSEIAELQKLKAADTNDPNAKIMVWDWRYYS
                     NQFNKQKYAVDKEALRAYFPFQKVLDGMFNIYQSIFGLKFEKIAAPHKWIDDLQLYLV
                     TDSATGEPLGMFYLDMFPREGKFNHFAQFVIISGKLLPNGKYQRPTVALLCNFPPASG
                     DAPSLMTHQDVETLFHEFGHALHSIVTRAKYGRFAGTNVPGDFVEAPSQMLQNWVWDK
                     KVLDTFAADYRDPSKKIPADIVKKLNDAKLANAGVLYRRQFAFASLDLALHDPHPEEM
                     PYDSVAISNPILEKVFLPIDPSTTFVSYFGHLNGYDAGYYGYAWADAIAADMATVFEK
                     AKDGYLDKQAGMKLRREIYEPGDSRDVNESIEKFLGRKQSIEPFLKKIGIGAQDKKKA
                     AAGPSQETR"
     gene            3082..4776
                     /locus_tag="VIS53_02450"
     CDS             3082..4776
                     /locus_tag="VIS53_02450"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766677.1"
                     /translation="MARQHDSVASKPAPDLALRTQAAHKADALARFVEGMAFEENGEM
                     ERALEAYRKVLNVDPGQSELASRVAGLLIQQDDFPQAIDVLKDAIKANPNNAEPYQQL
                     AFIYTRYLKRTDQAIDYANRAIALKPGDAEGYQRLVEIELAAGQERKALEALDRALKV
                     HSSDPSFWIRLGKLYVAILFKSDSQPKPEELKKTNEVFKRAAENSGDDPGILKDVADY
                     YAASQQLKEAIPLYLRVLELQPDDANAREKLATGFVLTNQRDKAVEMLEQIIKEHPEK
                     YQPYDLLAQVLDEEARSLQRANRIEEAKAKFTKVAANYEQSLLINPNHAGTYLRLAEL
                     LLGTLKDADRAVKLLGEARRRFPGAPEIVYYLAIAQREAKQSQQAVATFEEALHEAQL
                     EEDDDFVNAKFYFNYGMAAEQAGLYDKASDLLRKSIALDPENSAEAFNYLGYMWADHN
                     MNLDEAETMIRRALQSEPNNASYLDSLGWVQFRKGQFDRALDNLIRAAKTAQREDPVV
                     FEHIGDTYLKLNRTREALEAWQKALSLDPKNKNLADKIQATKKTIGKDLPEKTNPT"
     gene            4855..6216
                     /locus_tag="VIS53_02455"
     CDS             4855..6216
                     /locus_tag="VIS53_02455"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY5766678.1"
                     /translation="MKDYPTPWQRKMMWAALTACFVVVLGVIVAAVIWAGASIISFLQ
                     PILIPVAIAAILAYLLDPLVTKMSRGTLTRTKAIALLFAIGFFALGGLAAWLVPTISV
                     QSANFARQIPSYTERARDYIVDLIYRFDQTFGFLGAGQTKSASKSLTNFLIGPGPSAS
                     PHRQTTAIPTGSPQPTAPPTQVIAPTQPKLSSAERQRIQAYVEKQMPKLQEALPTLLG
                     KLWDILKTSIGGFLGATGFLLSLILVPVYLFFLLKEKPRIEERWTDYLPLRASPLKNE
                     VANVLLQINSYVVAYFRGQLLVCLVDGILIGTALTLFGLNFAAVIGAMVVVLTMIPYI
                     GIIICWVPAVLIAAFQWGDWTHPIIVTAIFIVIQNLEGVFYAPRIVGNYVGLHPMTVI
                     VSIFVWGLIIGGVIGPLLAVPLTATLKVLFGRYVWSRRLQEQSVPIESALTVEEIEMA
                     THR"
     gene            6234..8078
                     /locus_tag="VIS53_02460"
     CDS             6234..8078
                     /locus_tag="VIS53_02460"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766679.1"
                     /translation="MKGRSGSTDVETTHQTSVQFEHVEQGRNPRSGRLIVAIAGLAIA
                     FLIGVLFVSYGSKLYENWRERRLLEKATTLLQEGKLSKAAHMAQELARRHPDSLAALS
                     ILADTAERQNLEEALIWRERIARLLPKDPESQLNFASAALRFGKLDLAREALDRVSAS
                     DRDSAAFHVVAGWLASAEGNFAEQEEQFAAAVKKEPKNDLYQFNLAALQIRSKDAEKS
                     KEARDTLERLITIAPYRTGALRALLNDAVERNDRSAADGLAQQLQMSPEVTFGDYLLC
                     LNFYQKLDEKKFRGLLEKVKPFAARNASDLAALIDWMNQNGLAGDVVKWVDKLPPAQL
                     NSPLASVAIADAYATVKNWSRLKRWTRTGNWGDTEYLRLAFGAIAERHLRSGNDSSAK
                     SEFETLWQSAAELSQDMPEHELVLARLATKWQLASQAQKLWGRVQENPTMRREALDNL
                     RQLYRAKNETTKLYAVLQRLHESSPNEAPITADLARLGLNLGENAESSHQLAKEAYDR
                     APNEVDCAVTYAFSLYRLGRTAEALAIIQSLPPESLHDAHAAVYVALVLVEGNELEEA
                     KNYIAAAENGKLYPEEKKLLEEAKTALIAAPATPSRAESPPPSETPQL"
     gene            complement(8149..8964)
                     /locus_tag="VIS53_02465"
     CDS             complement(8149..8964)
                     /locus_tag="VIS53_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEY5766680.1"
                     /translation="MTASTATVVPAIHGEGRPNEFHRRSVAALHAAEVPFLIGGAYMV
                     EVCGGVSRSTKDFDLYIRPNHVKAALRALARAGYKTELTFPHWLAKATYDGDIVDLIF
                     RAGNGLCEVDDSWFDRARDDELLAVPVKHCASEEMIWMKAYIMERERFDGADIAHILR
                     CCAAEIDWPHLVRRFGPDWRVLLSHLILFGYIYPGERARIPAAIMEDLITRLRSEART
                     AGPERLCRGTLLSRQQYLVDVEEWGFRDARLEQRVQMNEKDIADWTDAIEKEQ"
BASE COUNT         2293 a         2467 c         2449 g         1921 t
ORIGIN      
        1 atcgacaagg acgagcaacg ctgtcagcag tgccggcccg gctatcaaag gcatcccaag
       61 cgggacgaca ccgaagtcgg ccgtggcttc gcgactggcc ggcgcgacat taagcaactc
      121 ccgcccggct aagccaagca aaatgaggcc gcctgccacc tgaaaatccg atacggtaat
      181 tccaagcgcc gtaaagatta ttttccctag aaatataaat ccaactgaaa tacagagcgc
      241 cgtgaagatg gcgatgaaac cctctcgctg gcgttgttcg cgcggagtgt cccccgccag
      301 acccataaac accgctacta ggccaatagc atctatcgcg acaaaaatcg gaataaaggc
      361 aacgaaaaat ttgtggatca ttgctttacg cgtgtcgcca aatcgctgtt ctcgtcacag
      421 atgaacacag gtgaaacgca gattcatcaa aattccttct gccaccggtg aaaatctgtg
      481 taactctttg gcctattttg ttcttcgacc gctatgtcaa acgaatccag taaagccgca
      541 tttgtttaca tctcactcat tctgctcgct tcgagcttag tcgtttcggc cgccgacatg
      601 aaaacggtcg atgattttcg tgccgcggcg gcaaaggcga aggccgtatt gacgattccc
      661 gattgggagc aaacaccgga agcggttgag accggaatga aaaatgcgat tgcgaaggcc
      721 aacgcatcgc tggatcagat cggtgcccaa gagccaggca aggtgacttt caagagcact
      781 gtggtcgcgt tggatgatct gacgtacgag acgggtctgg cggcgaatag ggccaccctc
      841 attaaggaaa cgaacacgaa tccggccatg cgcactgctg gggagaacgc cgtgaaagcg
      901 ttccaggact gggcggtcgg tgtcgattat cgcgaggacg tttacaaggc gatcaaggca
      961 ttcgctgata cgcatccaaa gctcagcggc gaagacgaaa agttgctgaa ggaaatgcta
     1021 cgcgattatc gtcgtgctgg tttggaatta cctcctgaca agcgcaagga agttgaggaa
     1081 ctgcgcaaag agctgaccaa gctgggaacg gatttcgaca ccaacatcgt taagtcgaac
     1141 gctccggtca tgtttagcaa ggccgatctc gacgggcttc ctgaaagctt cttcgcttcg
     1201 cccggcatca aaaccggcga cgacgtttat acggtgatgg cgaatgtcac ttggcaattc
     1261 aacacagtcc aggaaaacgc caaaagcgag gcgacgcgca aacagctgta catcgttcgc
     1321 gaaacgctgg cgaaagacga aaacgttcct cttctgaacc aaatgctggc gctccgaaac
     1381 gaaattgcgc tgcgcctcgg ttacaagtca tgggacgatt accagacgga agtcaaaatg
     1441 gccaagaccg gcatgaatgc ggaaaaatac atcaacgatc tggtcacagg cattcagcca
     1501 aaattcgaca gtgaaattgc ggaactgcaa aagttgaagg ctgccgatac caatgacccc
     1561 aacgccaaga tcatggtgtg ggactggcgg tactacagca accagttcaa caagcaaaaa
     1621 tacgccgtcg ataaagaagc gttgcgcgcg tatttcccat tccaaaaagt cctcgacggg
     1681 atgttcaaca tttatcagag catctttggt ctgaagttcg aaaagatcgc cgctccgcac
     1741 aaatggattg acgatctcca gctgtatctc gtcaccgatt cagccacggg cgagccgctc
     1801 gggatgtttt atctcgacat gttcccgcgc gaaggaaaat ttaatcattt cgcgcaattc
     1861 gtcatcatta gcggtaagct tttgccgaac ggaaaatatc agcgacccac tgttgccttg
     1921 ctctgcaatt tcccgccagc gagtggcgat gcgccgtcat taatgacgca tcaggacgtg
     1981 gagacacttt tccacgagtt tgggcacgct ctgcattcca ttgtcactcg cgcgaagtat
     2041 ggccgcttcg cgggaacgaa tgtccccggg gattttgttg aggcgccatc gcagatgctg
     2101 caaaactggg tttgggacaa aaaagtgctg gatacttttg ctgccgatta ccgcgatccg
     2161 tccaaaaaaa ttcccgcaga catcgtcaag aagcttaacg acgcgaagct ggcgaatgcc
     2221 ggcgtgcttt atcggcgcca gttcgcgttc gcttcactcg atcttgctct gcatgatcca
     2281 catcccgaag agatgccata cgattctgta gcaatatcga acccgatctt ggaaaaagtc
     2341 tttttgccga ttgatccaag cacaacattc gtctcctact ttggtcatct gaatggctac
     2401 gatgccggtt actacggcta cgcctgggcg gacgcgattg ccgccgacat ggcaaccgtt
     2461 tttgaaaagg caaaggacgg atacctcgat aaacaggccg gaatgaaatt acgccgcgaa
     2521 atttacgagc cgggcgattc acgtgatgtc aacgagtcga tcgagaaatt cctgggccgc
     2581 aaacaatcga tcgaaccatt tttgaagaaa atcggcattg gcgcacagga caaaaagaaa
     2641 gcagcagctg ggccatcaca ggaaaccaga tagcgaatcg ccgacgacgc ttgcactgcg
     2701 gtgaattaga tgattcaatc gaattccggt tattactaga aatctgaatg ggctcgctta
     2761 aaaaacgaag gaaagcaaaa attgccaagc acaagcgccg caaacgcatg aaggcgcacc
     2821 ggcataagaa gcgactgcgg tacaagttgt aaggcacgat ctcatttgct tttgcgagcg
     2881 cagctgccgc ccctgccggt ttgccgaacc cgcgccagaa agataagatt aggcgtgagc
     2941 gagcagaaaa agtggtgcat ttgctgcacc tgccgaaggc tttttttcgc gctgagtttt
     3001 ctgctttcag caacggttgc ggaggcgcag gcgcctaagg cttcacctgc gaaagttccc
     3061 cgcgcccatc ctgtaaaacc tatggcgcgc caacatgatt cagttgcatc gaagccggct
     3121 ccagacctcg cgttgcgaac gcaagccgcg cacaaagcag acgcgctcgc gcgtttcgtt
     3181 gaaggaatgg cgttcgagga aaacggcgag atggagcgcg ccctggaagc ctatcgaaaa
     3241 gtcctcaatg tcgatccagg tcagtcggag ctcgcgtcgc gcgtggccgg tttgctgata
     3301 cagcaggatg atttcccaca ggctatcgac gtgctgaagg acgcaatcaa ggcaaacccg
     3361 aataacgccg agccgtacca gcaactcgct tttatctaca cgaggtatct gaagagaacg
     3421 gatcaggcaa ttgattacgc caatcgcgcc atagctctga agcccggaga tgcggaaggt
     3481 tatcagcgcc tggttgaaat cgaactcgca gccggacaag aaagaaaagc gctcgaggct
     3541 ttggatcgcg ccctcaaagt tcatagcagt gatccgagct tctggatacg ccttggaaag
     3601 ctgtacgtgg cgattctttt taagtcagat tcacagccga agccggagga gctgaaaaaa
     3661 actaacgagg ttttcaaaag agcggcggaa aattccggcg atgatccggg aatcctcaag
     3721 gacgtagccg attactacgc ggcatcgcag caactgaagg aagcgatccc gctttatttg
     3781 cgtgttctcg agctgcaacc ggacgacgcg aatgcgcgag agaaattggc gacgggtttt
     3841 gtcctcacga atcaaaggga caaggcggtt gagatgctcg agcaaattat caaagagcac
     3901 cccgaaaaat atcagccgta cgatttactg gcccaggtgc tggatgaaga agcgcgatcg
     3961 ctgcagcgcg cgaatcggat cgaggaagcg aaagccaagt tcaccaaggt cgccgctaat
     4021 tatgagcaaa gccttttaat caatccaaac cacgccggca catatctgcg tctcgcagag
     4081 ttgctccttg gaactttgaa agacgcggat cgtgcggtca aactgctggg cgaggcccgg
     4141 cgccgatttc caggtgcacc ggagatcgtt tattacctgg ccatcgcaca gcgcgaagca
     4201 aagcagagcc agcaagcggt ggccacgttt gaagaggcgt tgcacgaagc gcaactcgaa
     4261 gaagacgatg acttcgtaaa tgcgaaattt tacttcaatt acggaatggc tgccgaacag
     4321 gcgggtttgt acgacaaggc ctccgatcta ctgcgtaaat cgattgcgct cgatccggag
     4381 aactcagccg aggccttcaa ttacttgggt tacatgtggg cggatcacaa tatgaatctg
     4441 gacgaagctg aaacgatgat cagacgcgcg ttgcaaagcg agcccaataa cgcctcctac
     4501 ctcgatagtc tcggctgggt gcaatttcgg aaaggtcaat ttgatcgagc cttggacaac
     4561 ctcatccgcg ctgcgaagac tgcgcagcgc gaagatccgg tcgtatttga acacatcggg
     4621 gacacttatt tgaagttgaa tcggaccagg gaagccttgg aagcctggca gaaagcgctg
     4681 tcgctggatc cgaaaaacaa aaatctcgcg gacaagatcc aggctacgaa aaagactatc
     4741 ggcaaggatt taccggaaaa gaccaatccc acctaacgag tgcgctaaca tcgaacacga
     4801 acatcgaaca tcgacactga acatccgacg ccgacatttc gatgatgttg agagatgaag
     4861 gattatccca cgccgtggca acgcaagatg atgtgggcgg cgttgactgc ctgttttgtt
     4921 gttgttctcg gcgtcatcgt tgccgcagtg atctgggccg gcgccagcat catcagtttt
     4981 ctccagccga ttctgatccc ggtggcgatc gccgcaattc ttgcctatct gctcgatccc
     5041 ttggtgacga aaatgtcgcg cggaacgctt actcgcacca aggctatagc gctgcttttc
     5101 gcaattggtt tttttgcatt gggcggattg gcggcatggc tcgttccgac gatctcggtt
     5161 cagagcgcga atttcgccag gcaaatccct tcttacaccg aacgggctcg agattacatc
     5221 gtcgacctta tctatcggtt cgaccagaca ttcgggttcc tgggcgcagg acagacgaaa
     5281 tccgcgtcga aaagtcttac caatttcctg atcggcccgg ggccatctgc ttctccccac
     5341 cgacagacga cggcgattcc gaccggatcg ccgcaaccca ctgcgccccc cactcaagta
     5401 atcgccccaa cccaacccaa actgagcagc gccgaacgcc agcgcattca agcatacgtg
     5461 gaaaaacaaa tgcccaagtt acaggaggcg cttccgactc tactcggaaa gctgtgggac
     5521 attttgaaga caagcatcgg cggatttctc ggcgcaaccg gcttcttgct cagtcttatc
     5581 cttgtcccag tctatttatt ttttctactc aaagaaaagc cgcgcattga agaacgatgg
     5641 acagattacc tgccgttgcg cgcgtcgccg ctgaagaacg aagtggcgaa tgtactatta
     5701 cagatcaact cgtacgttgt tgcgtacttc cgcggtcagc tacttgtctg tctggttgac
     5761 ggcattctca ttggcaccgc gttgacactg ttcggcctaa actttgcggc cgtgatcggc
     5821 gcaatggtgg tcgtgctcac gatgattcct tatatcggca tcatcatttg ctgggtgccg
     5881 gctgttctca tcgcggcatt tcaatggggt gattggactc acccaatcat cgtgaccgcg
     5941 attttcattg tgattcagaa tctggaaggc gttttctacg cgccacggat tgtcggaaac
     6001 tacgttggct tacatccgat gacagtgatt gtgtcgatct ttgtctgggg cttgatcatt
     6061 ggcggagtca tcggtccgct ccttgctgtg ccgcttactg ccacgctgaa ggtgcttttc
     6121 gggcgttacg tttggagccg gcgtttgcag gaacagtctg tgccgatcga aagcgctctc
     6181 acggttgaag aaatcgaaat ggcgactcat cgttagcgca gcaaacagcg tgcatgaaag
     6241 ggagaagtgg atcgacggac gtggagacga cgcaccaaac ctcggttcag ttcgagcacg
     6301 ttgagcaggg cagaaacccc agaagcggtc gtctgatcgt tgcgattgcg ggattggcaa
     6361 tcgctttctt gataggcgtt ctttttgtca gttacggctc aaaactctat gagaactggc
     6421 gcgaacgccg gttgctagaa aaagcaacta cactcttaca ggagggaaag ctcagcaaag
     6481 cagcccatat ggcgcaggaa ctcgcccgcc ggcatccgga ttctctcgcg gcgctctcga
     6541 tcctggcaga cacggcggaa agacaaaatc ttgaagaggc acttatatgg cgcgagagga
     6601 tcgcgcggtt gttgccaaaa gatccggaga gtcagcttaa ctttgcctcc gcggcgctcc
     6661 gctttgggaa actcgatctc gcccgcgaag cgcttgatcg agtctctgcc agcgatcggg
     6721 acagcgcagc gtttcatgtc gttgctggtt ggctggcgag cgcagaaggt aattttgccg
     6781 agcaggaaga acaattcgca gctgcggtaa agaaagagcc gaagaacgac ctctatcaat
     6841 tcaatctcgc ggcactgcag attcgttcca aagacgcgga aaagagcaag gaggctcgcg
     6901 atacgctcga gcgacttatc acaatagcgc cgtaccgaac tggcgcgcta agagcattac
     6961 tcaatgatgc tgtggaacgc aatgaccgca gtgctgcgga tggcttggcg caacagctcc
     7021 aaatgtcgcc agaggtcaca ttcggcgatt acctgctttg cctgaatttt tatcaaaagc
     7081 tagacgagaa aaaattccgg gggctcctgg agaaagtgaa accgtttgcg gcgcgtaatg
     7141 catctgatct cgcagcgctg atcgactgga tgaatcagaa cggactcgct ggagacgttg
     7201 tgaagtgggt cgacaagttg ccgccggcac aattgaattc gccgcttgcg tctgtcgcaa
     7261 tcgcggatgc ttatgcaact gtgaagaatt ggtcgcgtct gaaacgctgg acacggaccg
     7321 gaaattgggg agacaccgaa tacctgcgtc tggcgttcgg cgcaatcgcg gagcggcatt
     7381 tgcgttccgg caatgactcg agcgcgaaat ctgagttcga aacgctttgg cagtctgccg
     7441 cggaattgtc acaggatatg ccggaacatg aacttgtgct cgcgcggctc gccacgaaat
     7501 ggcaactggc gagccaggcc caaaaactgt ggggtcgcgt ccaagaaaat ccaacaatgc
     7561 gtcgtgaagc gctcgacaat cttcgccagc tttatcgcgc caaaaacgaa acaaccaagc
     7621 tatacgcagt tctccaacgg cttcatgaaa gttcgcctaa cgaggcaccg ataacagccg
     7681 atctggcgcg gctcggactg aacctcggag aaaatgctga aagctcacat caactcgcga
     7741 aagaggctta tgaccgcgcg ccgaatgagg tcgattgtgc ggtcacgtac gcattttcac
     7801 tttatcgcct cggcagaacc gcagaggctc ttgcgattat ccaaagtttg ccgcctgagt
     7861 cgctgcacga tgcccacgca gccgtttacg tcgcgctggt gctcgtcgaa ggaaacgaac
     7921 tcgaggaagc aaagaattac atagccgctg ccgaaaacgg caaactttat cccgaagaga
     7981 aaaagctgct cgaagaagcg aaaacggcgc tcatcgcggc gcctgcaact ccgtcgcggg
     8041 cagagtcgcc gccgcccagc gaaacacccc agctgtagag tccgctgtcc tcagcggatg
     8101 agcagcggaa atgcgatgag gacagcgcac gctacagcgc tgtggtaatc actgttcttt
     8161 ctcaattgca tctgtccaat ccgcgatgtc tttctcattc atctgaacac gctgttccaa
     8221 acgcgcatcc cgaaatcccc actcctctac gtccaccaaa tattgctgcc gcgaaagcag
     8281 cgtaccgcgg cataatcgtt ctggcccggc agtcctcgct tcgctccgga gccgtgtaat
     8341 caaatcctcc atgatcgccg ccgggattcg cgcgcgttcc ccgggataaa tatagccgaa
     8401 caggatcaaa tggctgagca atacgcgcca atcaggaccg aaccggcgaa ccaggtgcgg
     8461 ccaatcgatc tccgctgcac agcagcgaag aatgtgcgcg atgtcggcgc cgtcgaaccg
     8521 ttcgcgttcc atgatgtacg ccttcatcca aatcatttcc tcggacgcgc agtgtttcac
     8581 aggcacggcc agcaactcgt catcgcgcgc gcggtcgaac cacgaatcat ccacttcgca
     8641 caatccattg ccggcgcgaa aaatcagatc aacgatatct ccgtcatacg tggccttggc
     8701 cagccagtgc gggaatgtca gttcggtttt gtaccctgct cgcgctagcg cacggagcgc
     8761 tgccttcaca tgattcggcc gaatatagag atcgaagtcc ttcgtgctac gcgacacgcc
     8821 tccgcacacc tccaccatgt acgcgccgcc gatcaggaac ggaacctcgg cagcgtgcaa
     8881 cgctgccact gatctgcgat gaaactcatt aggcctgcct tcaccatgga tggctggaac
     8941 taccgtggct gtgcttgcag tcattactca tcaattacgc acttgaaccg cgccacgcgt
     9001 gcatggccgg cggtgatgct tgcggaaacg tccatcctta gtcgtcgttt cgtttcttaa
     9061 agcgatggca aaaggaatgt tgcgtatcgc tgcgaccgcg gatcttcatt atgccaagca
     9121 ttcgcgcgga
//
LOCUS       DATDAJ010000105         6197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_654725, whole genome shotgun sequence.
ACCESSION   DATDAJ010000105 DATDAJ010000000
VERSION     DATDAJ010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6197
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_654725"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(51..776)
                     /locus_tag="VIS53_02470"
     CDS             complement(51..776)
                     /locus_tag="VIS53_02470"
                     /inference="COORDINATES: protein motif:HMM:NF040370.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766681.1"
                     /translation="MSIRIAMWSGPRNISTAMMRAWGNRDDTVVIDEPFYAYYLKVTG
                     IEHPGADEVIATGETDWRKVVACLTGRITNGKRIFFQKHMTHHLLPEIDREWLEAVTN
                     CFLIRDPREVINSYIKKREEPALEDLGFVQQAEIFDFVRTRTTAVPPVVDAKDVLQNP
                     EGTLRLVCEAVGVKFSKSMLSWPPGLRDTDGIWARHWYGEVAKTTSFQPYHPTPSEVP
                     ARLCEIYQRCCECYERLYAYRLC"
     gene            complement(901..1455)
                     /locus_tag="VIS53_02475"
     CDS             complement(901..1455)
                     /locus_tag="VIS53_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766682.1"
                     /translation="MPKLLTLTFVILGSVAFCPHPAMALRFSAPTPKFNYTDASGKKQ
                     SVEVVDQYYPKKIVQPIAKADAQIDPKLRRAATIAEERARAHSLSKCWRFVKEALVAA
                     GVVKSRPETPLAKQAGQELVNNYGFKKLPVSNPYEAPVGSVLVYGAKRAPGHVEIRTE
                     TGFVSDFRSKTPSRRPLIGVFAKS"
     gene            complement(1565..2389)
                     /locus_tag="VIS53_02480"
     CDS             complement(1565..2389)
                     /locus_tag="VIS53_02480"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY5766683.1"
                     /translation="MLTRSIPSSGEKLPVIGLGTWRAFDVDLSADTRRQLQDVLSLFV
                     KVGGRVIDSSPMYGRAEEVIGDLTSAPGIREKLFLATKVWTKGKQSGIQSMERSMSLL
                     RTNRIDLMQVHNLIDVNTQLATLQEWKQQGRIHYTGITHYESGALTEIEKLMRSQKFD
                     FLQINYSLMEPEAEERILPLAEEHGLAVIANRPFGAGDLFGKVRSKSLPDWAAEFDCR
                     SWAQFFLKWIVANPAITCAIPATDKPRHLEDNMQGGMGRLPDAKLRRRMAELVSSL"
     gene            2526..3683
                     /locus_tag="VIS53_02485"
     CDS             2526..3683
                     /locus_tag="VIS53_02485"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY5766684.1"
                     /translation="MASGTDALQALYASMDRRRFIKISTASALASRVTTTSLFAEKTP
                     TPMRILILGGTGFTGPYQVNYALSRGHKVTTFNRGKTHPGELPAEVEQLVGDRNGNLD
                     ALKNRQWDVVIDNPTTLPAWVRDAAQVLKGNVDRYVFISTISVYGEPKQGPDENAPTE
                     KYEGADPYKETIEAVRASGFKTYAPLKALSEREAEKWFPGKTLIIRPGLIVGPRDESD
                     RFTYWPVRIDRAGDVLAPGKPNDPVQFVDARDLAEWTIRMAETRETGIYNATGPAKPF
                     SIGGMLDGIKSALKSDAKFTWVNEEFLTEQKVQPWSDMPVWTGKDDSVARTNISRALS
                     KGLTFRALDVTARDTLAWFKSLPQDRQSHPKAGLSPERETEVLAQWHKRRG"
     gene            3698..5026
                     /locus_tag="VIS53_02490"
     CDS             3698..5026
                     /locus_tag="VIS53_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766685.1"
                     /translation="MARSSDRPSFVGRIFSTLTSVERREFPLVVAAFFLFFCVLGGYF
                     AVRPVRETMGTILGRDRVANLWVATWIVSLGIVPIYGAIVAKVRRSVFLPLIYGFVAV
                     ALAVVGGVLQNQPRNVAVGQFFYVFISVLSLFLVSVFWSFLVELFDSGQAKRLFPVIA
                     AGGTAGALVGPLFTDLTARSIGNAGILFVGAALFGLAVALQAILIRLWKSGPDPHLER
                     GEAHHQSRDRALGGNPLAGVTLVLRSPYLLGIAAYVALLATANTFLYFEQLRLVSTTF
                     ADTQTRTSVFARIDWIVQSITILAQLFITGRIASRLGLVVLLTIIPVAIFFGFVALAI
                     WNTFMVLAVVIVLRRSGEYAFVRPGREMLWTPMSKETKYKAKNFVDVPVYRGADAAVA
                     QLQRAIEGAGFGVQTALLLGALAAVLWAINGWWLGRRYDSAAQPPSEGAH"
     gene            5302..5727
                     /locus_tag="VIS53_02495"
     CDS             5302..5727
                     /locus_tag="VIS53_02495"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR03562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY5766686.1"
                     /translation="MATRTGSAVWEGTLKQGRGTMRLGSGAFDGPYSFSSRFEEGKGT
                     NPEELIGAAEAGCYSMALSANLEKAGHPAKRISTTATVKLEMVGGGPKITTIDLKTEA
                     DVPGIDETKFREQAELTKKTCPVSVALAGTQINLEATLL"
BASE COUNT         1329 a         1715 c         1756 g         1397 t
ORIGIN      
        1 cgattgtctt gttgtagggg cgtttgtgtc aaacgcccaa tagtccccgt tcagcacagg
       61 cgatacgcat aaagccgctc atagcattca cagcaccgct ggtagatctc acacaatcgc
      121 gccggaactt cgctcggtgt cggatgatac ggttgaaatg aagtggtttt tgccacttcg
      181 ccataccaat gcctggccca gatgccatcg gtgtcacgca agcctggtgg ccacgaaagc
      241 attgacttgc taaacttgac gccgaccgct tcgcagacca gtcgtagcgt cccctccgga
      301 ttttgcagca cgtccttcgc atcaacaacg ggcggaacgg cagtcgtacg tgttcggacg
      361 aagtcaaaaa tttctgcctg ctgcacgaaa ccgaggtctt cgagcgcggg ttcttctcgc
      421 tttttaatgt aggaattaat cacttcgcgc gggtcgcgaa ttagaaaaca attagtcaca
      481 gcctcgagcc attcgcgatc tatttcgggc aacagatggt gtgtcatatg tttctgaaaa
      541 aaaatccgct taccgttcgt gatccgcccg gtgagacacg caacgacttt acgccaatcg
      601 gtttcgccgg ttgcgatcac ttcgtccgcg ccgggatgtt ctatgcccgt cactttgaga
      661 taataggcgt aaaacggctc atcgataacg acagtgtcgt ctcgattgcc ccacgcgcgc
      721 atcatggccg tcgagatatt tcgcggacca gaccacatgg cgatccggat gctcacggcc
      781 ggaacagtca ggcggcaaag ccgcgtgtgc aacggcgttg aggacgacgc gttccacctt
      841 ttgtttaggt ggatcggctt ctccgaagac gatgtcagcc gccgcaggcg cggtttcaaa
      901 ctaactcttc gcgaaaacgc caatcagcgg acgccgcgat ggcgtcttcg aacgaaaatc
      961 gctgacgaat ccagtctcgg tccggatctc cacgtgaccg ggtgcgcgct tggcgccgta
     1021 gaccagcaca gatcccacag gcgcttcgta cggatttgag accggcagtt ttttaaatcc
     1081 gtaattgttc accaactcct gaccggcttg ttttgccagg ggggtttccg gccgcgattt
     1141 cactacgccc gcagcaacca acgcttcctt tacgaaacgc cagcacttgg acagcgagtg
     1201 cgcacgtgcg cgctcctcag cgatggtagc ggcccggcgc aatttcggat caatctgcgc
     1261 atctgccttg gcaatcggct ggacgatctt cttcggataa tactggtcca caacttcgac
     1321 cgattgtttt ttgccagagg cgtcggtgta attgaatttt ggggtgggcg ccgagaatcg
     1381 cagcgccatt gcgggatgcg ggcaaaatgc cacggatccc aggatgacaa aggtgagggt
     1441 gagaagtttt ggcataaaag ccgcgatcta tcgggtatat cagccagggt cgcaaccgat
     1501 ttttttagca aaggcaaaat ttttaatttg acttactcgg gatgcacgaa ggcgtgtcgc
     1561 ggacctacaa cgatgagacc aattcagcca tccggcggcg caattttgca tcgggtaacc
     1621 gacccattcc gccctgcata ttatcttcga gatgacgcgg tttatccgtc gccgggatcg
     1681 cgcacgtgat tgctggattt gccacaatcc atttcaaaaa gaattgcgcc cacgagcggc
     1741 aatcaaattc cgccgcccaa tccggcagcg atttcgaacg cactttgccg aacagatcgc
     1801 cggctccaaa tggccgattc gcgattacgg cgaggccgtg ctcctccgcc aaaggcagaa
     1861 tgcgttcctc ggcttcgggt tccatcaacg aataattgat ctggaggaaa tcgaacttct
     1921 ggctccgcat caatttttcg atttcggtca aagctccgga ctcgtaatgc gtgattccgg
     1981 tgtagtgaat gcggccctgc tgtttccatt cctgcaaggt tgcgagttgt gtgttcacgt
     2041 cgataagatt atgcacctgc atcagatcga ttcggttcgt gcgcaaaagc gacatggacc
     2101 gttccattga ctgaattccg ctctgcttcc ccttagtcca aactttggtc gcgagaaaca
     2161 gcttctcgcg gatgccaggc gcagaagtga gatcgccgat gacctcctcc gcgcgaccgt
     2221 acatcggcga ggaatcaatc acacggccgc cgaccttcac aaacagcgac agaacgtctt
     2281 ggagctgcct ccgggtgtcc gcgctaagat cgacgtcgaa cgccctccat gtgccgaggc
     2341 cgatcaccgg tagtttctcg ccagaggaag gaatgctgcg tgtcagcatc gctgatgatt
     2401 cgctgttcgc ctggccccgc gatgcatcag ttggcaacat tagccccgcc gtagcagtgc
     2461 caattatttt cgcggcttcc cgtcgcgtca cgaaccccac tgtagggcgt ttctgtgaaa
     2521 cgccaatggc atctggcaca gacgccctac aggcgctata tgcctctatg gatcgccgtc
     2581 gtttcataaa aatatccacc gcgagtgcgc ttgcctcgcg agtaactacg acatctttat
     2641 ttgcagagaa gacaccgaca ccgatgcgca tcctgatact tggcggcacc ggattcactg
     2701 gcccctatca ggtgaactat gcgttaagtc gcgggcataa ggtgaccaca tttaaccggg
     2761 gtaagacgca tccgggcgaa ttgccggctg aagttgagca gcttgtcggc gaccgtaacg
     2821 gtaatctcga cgcgctgaaa aaccggcaat gggatgtggt gatcgataat ccgacgacgc
     2881 tgcccgcgtg ggtgcgcgac gcggcgcaag tgctcaaagg aaacgttgat cgctacgtgt
     2941 tcatttcgac catctccgtt tacggcgagc cgaaacaggg gcctgatgaa aacgcgccga
     3001 cagaaaaata cgaaggtgca gatccgtaca aggagaccat tgaagcagtg cgcgcatccg
     3061 gattcaaaac ttatgcgccg ctaaaggcgc tctcagaacg cgaagccgag aaatggtttc
     3121 ccggaaaaac tttgatcatt cgcccgggac ttatcgtcgg cccacgcgac gagagcgacc
     3181 gctttaccta ttggcctgtg cgcatcgatc gtgccggaga cgtgctggcg cctggaaagc
     3241 caaatgatcc cgtccagttc gttgatgcgc gtgatcttgc tgaatggacc atccgcatgg
     3301 ccgagacccg tgagacagga atttacaacg cgaccggacc tgccaaacct ttcagcatcg
     3361 gcgggatgct cgatggaatt aagagcgccc tgaagtcaga cgcgaagttt acctgggtaa
     3421 acgaagaatt tttgactgaa caaaaagtgc agccgtggtc ggacatgccg gtgtggacgg
     3481 gaaaagatga ttcggttgcg cgaacgaaca ttagtcgcgc gttgagcaag ggtctgacgt
     3541 ttcgagcgct cgacgtcacc gcacgcgata cgctcgcctg gttcaagtcg cttccgcagg
     3601 accgacaatc gcatccgaaa gctggtctct cgccagagcg cgaaacggaa gtactcgcgc
     3661 agtggcacaa gcggcgcgga tagtctaggg cgtccacatg gctcgttcct cagatcggcc
     3721 atcgttcgta ggacgtatat tctcgacgct tacgtccgtg gagcggcgcg aattcccgtt
     3781 ggtcgttgcc gcgttcttcc tcttcttttg cgtactcggc ggctatttcg ctgtgcgacc
     3841 ggtgcgagaa acaatgggca cgattctcgg tcgtgatcgc gtcgccaatc tctgggtggc
     3901 cacttggatt gtgtcgttag ggatcgttcc catttatggg gcaattgtcg ccaaagtcag
     3961 gcgaagcgtc tttctcccgc tcatttatgg cttcgtggcg gtcgcgctcg cggtcgtcgg
     4021 cggcgtcctg caaaatcaac ctaggaatgt ggcggtcggg cagtttttct atgttttcat
     4081 cagtgtgctc agcctgtttc tggtctcggt cttctggagc tttctggttg agcttttcga
     4141 ctccggacaa gcgaagcggc tgttcccggt gatcgcagcg ggcggaactg cgggcgcgtt
     4201 agtaggaccg ctctttaccg atctcaccgc gcgaagcatc ggaaacgccg gcatcctctt
     4261 tgtcggggct gcgctctttg gtttggcagt cgcgttgcag gcaattctga ttcgcctctg
     4321 gaaaagcggt ccagacccgc atctcgaacg cggcgaagct catcaccaat cgcgggaccg
     4381 tgcccttggt ggaaatccat tggcaggagt caccctggtc ctgcgttcgc cttatctgct
     4441 cgggattgcg gcttatgtcg cactgctggc gacagcaaat acctttcttt atttcgaaca
     4501 acttcgtctg gtctcaacga cgttcgccga tacccagacg cgcacgagtg tctttgcgcg
     4561 catcgactgg attgtgcaga gcatcacgat cctggcgcag cttttcatca ccggcagaat
     4621 tgcttcaaga ctcggattgg tcgtcctgct cacgataatt ccggtggcca ttttcttcgg
     4681 cttcgttgcg ctcgctatct ggaacacgtt catggttctg gcagttgtca ttgtcctgcg
     4741 tcgcagcggc gaatacgcct ttgttcgtcc ggggcgggag atgctttgga cgccgatgag
     4801 caaggagacg aagtacaaag cgaagaactt cgtcgacgtt ccggtttatc gcggggcgga
     4861 cgccgcggtg gcgcaacttc aacgggcgat cgaaggtgcg gggttcggcg tgcaaacggc
     4921 gcttttactt ggagcgttgg ccgccgtcct ttgggcgata aacggctggt ggcttgggcg
     4981 gcgctatgat tcagccgcgc agcctccgtc cgaaggagca cattaatcgc gcaattcggt
     5041 cagcaaattt ctcccgcgcg aggaccagtt cggcgggtga tcgtgtcggt tttaaaagcg
     5101 ctcggacttg gattgagctc gatcagctac ctccccttgc aagtggcggc ggggtggtgc
     5161 gcgctaggcg ttttcctcgg gcgaaaacag attgcgctgc tccgcgtcca cgctaagtga
     5221 agtgaggcag ccaatcctgt ctgccagaat tgcaggcagg attgcctgcg tcacgagaaa
     5281 acaatcaaag gaggcaaaac aatggcaaca cgaaccggat cggcggtatg ggaaggcaca
     5341 ctgaagcagg gcaggggaac aatgagactt ggcagcggcg cgttcgacgg cccttattca
     5401 ttttcatcgc gctttgaaga agggaagggg accaatccgg aggaactcat tggcgccgcc
     5461 gaggcaggct gttactcaat ggcgctctcg gcaaatctgg aaaaggctgg tcatccggcc
     5521 aaacgaatca gcacgaccgc gaccgtgaaa ctggaaatgg tcggcggtgg tccaaagatc
     5581 acaacgatcg atttgaaaac cgaagccgac gttccgggta ttgacgagac aaaattccgc
     5641 gagcaagccg aactgacgaa aaagacctgc ccggtctcag tcgctctcgc cggcactcaa
     5701 atcaatctgg aagcgacgtt gctatagctc taacggccag acaccaatta cacgaatttt
     5761 cactaatctt acgatgacga tttgcgagaa atctccttgg agaagttctt cgtgtgaatt
     5821 cgtgaaattc gtgtctcaga tcaatctcga cgcgaagttg gtgtaactcg cgatgtcctg
     5881 ggagcccgcg cgtctcgcgt gctggtttcg gcgtcgcgcc gaaacatctt tccctcgatt
     5941 gcgactgagg tgaggggaag gcggattcag agaaagtccg cgatcgcgag gacgcgctcg
     6001 ccagcacgcg agacgcgtgt gctgccagca tgctattttg ccaactcgta tagatattcg
     6061 acgaacgaca tcgtcgcgcc atcgaagtct tgaatcttcg ggtttgtgga ttcgatgatg
     6121 taatattcgt ccggggcatg cgcgccacta ccgtggccga gtccgaaatg tccggccgcc
     6181 agcttaagcg gttcgcc
//
LOCUS       DATDAJ010000106         5543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_655011, whole genome shotgun sequence.
ACCESSION   DATDAJ010000106 DATDAJ010000000
VERSION     DATDAJ010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5543
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_655011"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..1235)
                     /locus_tag="VIS53_02500"
     CDS             complement(42..1235)
                     /locus_tag="VIS53_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766687.1"
                     /translation="MASEPKKPIEQMLEALAKARRAEFGDDPKMPNPMRTRLHEEVAR
                     VGAAEDEKAESRESWLTMFWPRVTVAAALATLIVLVPAIWWKRSYPLAESGDLALRDR
                     TAGAADGLNRAVPAENTLAKAPAANATEPTVNLAENSQIKMEPAATPASEAGALASST
                     RVLQGDAATEFPSEVTKGFTDKEIATAKTQAVSATAPAAGRDSKAESGASAPSVAQPS
                     SAGSLGTKQQFPQQSAVQSFRNNVQASQTASVLNTFQVEQEGSEIRVLDADGSTYTGK
                     IEQSAKSGELDSDVTVRRDAAKQTRSYAAKAARENESATPAQSYFRATGYNVSLKKTL
                     VFEGNYAAPPAQQPATVTANDRERSEQSRDRARIVGTVRVNGGAPVEVDAVAETSDAV
                     KKSER"
     gene            complement(1240..1935)
                     /locus_tag="VIS53_02505"
     CDS             complement(1240..1935)
                     /locus_tag="VIS53_02505"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5766688.1"
                     /translation="MLRPRGFVIDQELSNTATPLPATDVSALASEAKIIAECRAGNTA
                     AWDSLFDKYYATVARFVFQLSGDFSHEDTEEICQETFLSVVRNLSSFEGRSSFQTWLL
                     RIAANKAMDYREKTRAAKRGGTAVHISIDAGRTDNEPPIDPPSGNPGPDALLQIAETS
                     RLVRESLDRLGEPCREIIELRYFGELSYNEIATELRLNPKTVSSRLSKCLDRLFAIAQ
                     EIFPQDNRLPSNL"
     gene            2062..4293
                     /locus_tag="VIS53_02510"
     CDS             2062..4293
                     /locus_tag="VIS53_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT domain-containing protein"
                     /protein_id="HEY5766689.1"
                     /translation="MNKKLLLAIGLLLLAGISLCRGDGFIVVERPIYVPPTHFPFAPL
                     EVTSHHVNVAIDGQVAITSIDQEFYNPNDQRLEGFYMFPVPKGAHIDKFSMEIGGKTV
                     DAELLPADKARRIYEDIVRKVRDPALLEYAGRDLFKVRIFPIEPRSRKPIKISYTELL
                     RSDAGTVTYLYQLSTEKFSARPIKNLSLKIELKSAEPLASIYSPSHKVEIKRDGPNRA
                     VIGYESKDEKPDTDFQLVYSSDARNVGLRLITYKPDGDDGYFLLLAAPTLSNETKPAA
                     KDVVFVVDTSGSMAGAKLQQAQKALRFCVENLNADDRFEIVRFSTEAEPLFRELVPAD
                     SDHRKRANGFIDNFKPIGGTAIADALQSALKVRPDKSDRPVVVIFLTDGLPTVGARNP
                     EEIVATIKKASGVRIFSFGIGSDVNTQLLDQIAEGTRAFSQYVLANEDLELKVSNFYT
                     RIKEPALTNLRLDLGGGVRTAKMYPTDLPDLFKGDQLVVAGRYSGAGDVEAKLTGNVG
                     GREQTFTYKLHFDDRKTTDDYVPRLWATRRVGFLLDEIRIRGETAELRDETTELARKY
                     GIVTPYTAYLIVEDEDRRRVPMADRSMQSMSADAGTRAEVAKAWTGFKDKKDGEDGVA
                     NARSQNAFKFAQQAPASITSGASESLRGFAAAVPAATPAAARLNQYTQQSRFVNGRAF
                     FQNGNQWIDSNAQNTAKRQRVRFNSEEYFNLLTKHPEAGPWLALGQNVVLTLDDTVYE
                     IAE"
     gene            4301..5449
                     /locus_tag="VIS53_02515"
     CDS             4301..5449
                     /locus_tag="VIS53_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEY5766690.1"
                     /translation="MKTPITRNIGILPIIWSAAAILGLWQPLFAKTAPTPQSKPHIEV
                     CFVLDTTGSMGGLIEGAKQKIWSIANEMISAQPTPELKLGLIGYRDRGDEYVVKSFSL
                     TDDIDAIYGHLREFQAGGGGDGPESVNEALAEAIHKMPWSSDSKVLKIIFLVGDAPPH
                     MDYPNGPKYPDLCQEAAKKDLIINTIQCGEMAETKPIWQEIAKLSEGSYVGISQSGNV
                     AVISTPMDKELSRLNERIGDTLIPYGDSKLQAEVHAKYAVAKSAPVSAMADRLSYNSK
                     TGKAVQGRGELVDALNDKTLKLDEIDQKQLPTELQKLDSSELQKRIAKTRDERADLQK
                     QIVEVSKKREAYIQSEHKRLAAEGKGDAFDQKVTETLHAQAAKKGINY"
BASE COUNT         1279 a         1589 c         1482 g         1193 t
ORIGIN      
        1 aggtcgtttc gaaaaactcg tcgcagacgg aaagaaaaac atcacctctc gctttttttc
       61 accgcgtccg atgtctctgc taccgcatcc acctctaccg gcgctcctcc attcacacgc
      121 accgttccaa cgatacgtgc ccggtctcgg ctttgctccg atcgctctct gtcgttggct
      181 gtcaccgtgg ctggctgttg tgccggcggc gcggcgtaat tgccctcgaa caccagcgtc
      241 ttttttaaac tgacgttgta cccggtcgcg cggaagtacg attgagcagg agtagctgat
      301 tcgttttcac gggcggcctt agcagcgtag cttcgcgtct gcttcgcggc gtcgcgtcgc
      361 acagtgacgt ctgaatcgag ctccccgctc ttcgccgatt gctcgatttt acctgtgtac
      421 gtcgagccgt cggcatcgag cacccgaatt tcacttccct cttgctcaac ttgaaatgtg
      481 ttcaagacac tcgcggtctg gcttgcctgc acattgttcc ggaaagattg aacggcagat
      541 tgttggggaa attgctgctt ggttccgagg ctgccggctg atgacggttg cgcgaccgat
      601 ggagcggatg ctcctgattc ggcttttgaa tcgcggccgg ctgcaggtgc agtcgcggat
      661 accgcttggg ttttcgcagt ggcaatctcc ttatcggtga aacctttcgt cacttcactt
      721 gggaactcgg tcgcagcatc cccttgtaga acgcgagttg atgaggctaa agctcccgcc
      781 tcagaggccg gcgtcgccgc gggttccatt ttgatctgac tgttctccgc cagattcact
      841 gttggttcgg tggcgttcgc tgccggagct ttcgcgagag tattctccgc gggcaccgcg
      901 cggtttagtc catcggctgc tccagcagtg cgatcacgaa gcgcaaggtc gccggactcg
      961 gcaagggggt atgatcgttt ccaccaaatc gccgggacga gcacgatcaa cgttgccagc
     1021 gccgccgcca ccgttacccg tggccagaac attgttaacc atgattctcg tgactcggct
     1081 ttttcgtctt ccgccgctcc aactcgcgcg acctcctcat gcaggcgcgt tcgcatcgga
     1141 ttcggcattt tagggtcgtc accaaattct gcgcgacgcg cttttgccag cgcctcgagc
     1201 atttgttcga tgggtttctt tggttccgat gccatacttc tataaattag acggcaaacg
     1261 attgtcctgt ggaaaaattt cttgggcgat agcgaacaag cggtccagac atttgcttaa
     1321 acgggagctg acggttttcg gattaagacg cagttccgtc gcaatctcat tgtaactcaa
     1381 ctcgccgaag taccgcagtt cgatgatttc ccggcacggc tcgccgaggc gatcaagact
     1441 ttccctcact aggcgggagg tctcggcaat ctgcaataac gcatcgggac cgggatttcc
     1501 agatggcgga tcaattggcg gttcgttatc agttcggccc gcatcgattg agatgtgcac
     1561 cgcggttcca cctcgtttcg ccgctcgcgt tttttcccga taatccatgg ccttgttcgc
     1621 cgcgatccgc agcaaccacg tttgaaatga gcttctaccc tcaaatgaag atagatttct
     1681 caccaccgac aaaaacgttt cctggcaaat ctcttccgtg tcttcgtgac tgaaatcgcc
     1741 ggagagctga aatacgaacc gggccaccgt cgcgtagtat ttatcaaaca gagaatccca
     1801 cgccgctgta tttcccgcgc gacattcggc gatgattttg gcttctgacg ccaacgctga
     1861 tacatccgtc gctggcagcg gtgtagctgt gttggaaagc tcctgatcga tcacaaaacc
     1921 tcgcggacgg agcatcttat cgacgtctga ctgtcgtgcg tggccttctg atcaaaaaaa
     1981 atacgccaca cctcgaatcg ttgcttgccc cgggtctttg aaagccggga gcatttttcc
     2041 ggaattcccg actaatgctc catgaacaaa aaattgctcc tagcgatcgg gcttctcctc
     2101 ctcgcaggca tctctctatg ccgcggagat ggtttcatcg tcgtcgagcg tccgatctac
     2161 gttccgccca cccatttccc gtttgccccc ctcgaagtga cgagtcatca cgtcaacgtc
     2221 gcaattgacg ggcaggtcgc catcacatcg atcgaccagg agttctacaa tcctaacgac
     2281 caaaggctcg aaggctttta catgtttcct gtcccgaaag gggcgcatat cgacaaattc
     2341 agtatggaaa tcggcggcaa gaccgtcgat gccgagttgc tcccagctga caaggcgcgt
     2401 cgaatttatg aggacatcgt gcgaaaagtg cgggatccgg cgctgctcga gtacgccggc
     2461 cgcgacctct tcaaggtccg catctttccg atcgaaccgc gcagccggaa gcctatcaag
     2521 atttcctata cggaactgct tcgctccgac gccgggacgg tcacttatct ctaccagttg
     2581 agcactgaga aattctccgc ccggccgatc aagaatctta gcctgaaaat tgagctcaag
     2641 agcgcggagc cgctcgcctc aatttactcg ccgagccaca aagttgagat taagcgcgat
     2701 ggccctaacc gcgccgtcat tgggtatgaa agcaaagacg aaaagccgga cacagatttt
     2761 cagctggtct acagctcgga tgcacgcaat gtcggcctca ggttaatcac ttacaagcca
     2821 gacggtgacg atggctattt cctgcttttg gctgcgccga cgcttagcaa cgaaacaaag
     2881 ccggcagcca aagacgtcgt ttttgtcgta gacacatccg gttcaatggc cggcgccaaa
     2941 ctccagcagg cgcaaaaagc gttgcggttc tgtgtggaaa atctcaacgc cgacgatcgt
     3001 ttcgagatcg tccggttctc gacggaagcc gagccgctct tccgcgagtt ggtaccagca
     3061 gactccgatc atcgcaaacg tgcgaacggt ttcatcgaca acttcaagcc aatcggcggc
     3121 accgcgattg ccgatgcact gcaaagcgcg ctcaaggtcc gaccggacaa gagcgatcgc
     3181 ccagttgttg tgattttcct aaccgatggt ctgcccactg tgggagcacg caatcccgag
     3241 gaaatcgtcg cgaccatcaa aaaggcgagc ggcgttcgga tcttttcatt cggaatcggc
     3301 tcggacgtaa acacacagtt gctcgatcaa atcgccgagg gtacacgggc cttcagccaa
     3361 tacgtgctcg caaatgaaga tctcgagctc aaagtctcga acttctatac gcggatcaaa
     3421 gagccggccc taacgaatct taggctggat ctcggcggcg gtgttcgcac agcaaaaatg
     3481 tatccgacag atctgccgga tctgttcaaa ggagaccaat tggtggtagc ggggcgatac
     3541 agcggcgccg gcgatgttga agcgaagctg accggcaacg tcggcggccg cgaacaaact
     3601 tttacttaca aactgcattt tgatgaccgc aagacgaccg acgattatgt gccgcggctt
     3661 tgggcgacgc gccgtgtcgg atttctcctc gatgagatcc gcatccgcgg tgaaaccgcc
     3721 gagcttcgcg atgaaacaac tgagctcgcc cggaaatacg gaatcgttac gccttacacc
     3781 gcttatctca tcgtagaaga cgaagatcgc aggcgtgtgc cgatggctga tcgatccatg
     3841 cagagcatga gcgccgatgc agggacacgt gccgaagtcg ccaaggcctg gaccggattc
     3901 aaggacaaga aagacggtga ggacggagtt gccaacgcgc gcagccagaa tgcgttcaag
     3961 tttgcgcagc aggcaccggc atcgatcaca tccggcgcct ccgaatcatt acggggattt
     4021 gctgccgcgg ttcctgccgc caccccggcg gcggcgcgtc ttaaccagta cactcaacag
     4081 tccaggttcg tgaacgggcg cgcatttttc caaaacggaa atcaatggat cgattcaaac
     4141 gcgcagaaca ccgctaaacg acagcgcgtc cgatttaact ccgaagaata cttcaacctc
     4201 ctgacaaaac atcccgaagc cggcccgtgg ctggcgttag gtcaaaacgt cgtgctcacg
     4261 ctcgacgaca ctgtctatga aatcgctgaa taacaatcca atgaaaacac caatcactcg
     4321 taacatcgga atcctgccga tcatctggtc tgcagctgca atactcgggc tgtggcaacc
     4381 gttgttcgcc aagactgcgc cgacaccgca atccaaaccg cacatcgagg tctgctttgt
     4441 tctcgatacg accggttcaa tgggcggttt gatcgaaggc gccaaacaaa agatctggtc
     4501 gatcgccaat gaaatgataa gcgcgcaacc aacgccggag ttaaagctcg ggctcattgg
     4561 ttatcgagac cgcggcgacg aatacgtcgt gaaatcgttc agtctcaccg acgacatcga
     4621 tgccatttac ggacatctgc gcgaattcca ggccggcggt ggtggcgatg gacccgaaag
     4681 tgtgaacgag gcgcttgccg aagcaattca caagatgccc tggagcagcg acagcaaagt
     4741 cctgaagatc atctttctgg tcggagacgc gccgccgcac atggattatc cgaacggccc
     4801 gaagtatccg gatctttgcc aggaagcagc gaaaaaggac ctcatcatta ataccattca
     4861 gtgtggtgag atggctgaaa ccaagccgat ctggcaggaa atcgcgaaat tgtcggaagg
     4921 cagttatgtc ggcatttcgc aatcgggcaa cgtcgctgtg atttcaacgc cgatggacaa
     4981 ggagttaagc cggcttaacg agcggatcgg cgacactctc attccatatg gcgacagcaa
     5041 actgcaggcc gaagttcatg cgaaatatgc agtggcgaag agcgctcccg tttccgcaat
     5101 ggccgatcga ctcagctaca acagcaagac cggcaaagct gtgcagggcc gcggtgaatt
     5161 ggtcgacgcg ctcaacgata aaacgcttaa actcgacgag atcgatcaga aacaacttcc
     5221 gaccgagcta cagaaattgg atagcagcga actgcaaaag cgcatcgcaa aaacccgtga
     5281 cgaacgcgcc gacctgcaaa agcagatcgt cgaagtatca aagaaacgcg aagcctatat
     5341 tcaatccgaa cacaaacgcc tcgcagccga aggcaaaggc gacgccttcg atcaaaaggt
     5401 gactgaaacg cttcacgccc aagccgccaa aaagggaatc aattactgat gctggatgaa
     5461 tggggaagag ggttcggtgc cgcgctcgtt ctgggttggg gagcgcaccc gcctcgggtg
     5521 ctggtgatcg agccctcgcg atc
//
LOCUS       DATDAJ010000107         5422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_665793, whole genome shotgun sequence.
ACCESSION   DATDAJ010000107 DATDAJ010000000
VERSION     DATDAJ010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5422
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665793"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1728)
                     /gene="ccsA"
                     /locus_tag="VIS53_02520"
     CDS             complement(<1..1728)
                     /gene="ccsA"
                     /locus_tag="VIS53_02520"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY5766691.1"
                     /translation="MKRFLPWIILAVAAASIAANWLPRKAAKDDFDLSMFGEFPVLVG
                     GRVKPLDTVARNSLLIIHGKQELRLEGGTRLSAMQWLTDVLFNAPVADQYPVFVVQNA
                     DVLGLFGWQQSDRKYFSFADFTPFLKQIDEQAAQSDKLEAVQRSAYQSAILNLRNGLS
                     IYQRLKNSIQPEGAQNFAAELHRFESTVPGAAKAARERSMGDNFDKAKLDDVAAMIQR
                     YERLSEMAYVLAVPPIAQNDQWHSVGDSLLRSVGTGEIHPIVNEYAVIGDAYRADDRM
                     LFNQHVQLVTDWFAKAQPKATKRASFEFLFNRLQPFSQSMALYVLAFLLACASWLGWS
                     SALRRSAFYVLLLAIAIHTFGLVSRMYLQERPPVTNLYSSAIFIGWGAVIVALILERI
                     FKDGIGAACAGAIGFVTLIIAHHLAGSGDTLEMLQAVLDTNIWLATHVVAITTGYSAM
                     FLAGMLAIIYVVRGVFTRSLKKQTADSLARMTYGVVCFATLFSFVGTVLGGIWADQSW
                     GRFWGWDPKENGAVLIVLWCAITLHARWGGFIRQRGLMIMALFGNIVTSFSWFGVNML
                     GVGLHSYGFM"
     gene            complement(1725..2882)
                     /locus_tag="VIS53_02525"
     CDS             complement(1725..2882)
                     /locus_tag="VIS53_02525"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HEY5766692.1"
                     /translation="MLHKLIDLITSLKLTIVCLAAGMALIFAGTLAQVHLGIHEAQQR
                     YFQSMFVWWPPEGRGFSIPIFPGGHLIGAVLLINLIAAHLKRFRWSWRKLGIHLTHAG
                     LIIMLAGGLFTDLFAVESHMRLANGDTKNFSEDTRETELAVIDTSGEDLDQVTAIPES
                     VLRHNRVIDHWSLPFRIAVRNFYQNSRLKMLSQAGEGAQPIANQGPGAMIAVEPAVRA
                     TAADERDVPSAALEILPKDGGSLGTWLVSDALGAPQTFACGGRTWMIALRPARYYKPY
                     SVTLQKFTHEKYAGTEIPKNFSSKVTLIDPERSVDRDALIYMNHPLRYRGETYYQAGF
                     QPDDSATILQVVRNPSFIAPYVACVIVAAGLLVQFGFHLVGFSRQRRRAIA"
     gene            complement(2888..4000)
                     /locus_tag="VIS53_02530"
     CDS             complement(2888..4000)
                     /locus_tag="VIS53_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766693.1"
                     /translation="MGLLGQPQQYNWAGIKAVVVCVALFAALAACDKNSEIKVYRVSK
                     APLEESEPQQHDAMPTNTTAPRMPSGLAPTAETAVTTPPNWEAQPLSQMRQASFLVKG
                     DNGAVADVSFVSLGSAAGNVLENVNRWLGQLGQPPITEQKLGEIAQRLHTSLGDVTIV
                     DLAGLPDNADPARDGRIVAAMVTTGNSTLFFKMRGNADLTEAQKGDFIKWVAAVCDAQ
                     TQTGPPQMAGAPPQTTSPPPIKWTTPEGWTEVPPSSMRYASFSAPADDGGKIDISVVT
                     FPGDGGSDADNINRWRGQMGLAPVDANAVTSQVTEFKTGDTTFSATDIAGNKTRTIAA
                     WTRRDGRVWFFKATGPNTSVEKEKPNFVKFIESVRF"
     gene            complement(4016..>5422)
                     /locus_tag="VIS53_02535"
     CDS             complement(4016..>5422)
                     /locus_tag="VIS53_02535"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HEY5766694.1"
                     /translation="AASALFAFCLLFAIDLIASHPNPYVGILAYLIAPLFFLLGIFLA
                     FLGAIIRWRTRRRAVQAAEPLAIKIDLSRPRDRRILALFGFGSMAFLFVTALGSYETY
                     HYTESVAFCGKTCHLPMTPQYVAYQHTAHASVECAACHVGPGAAAYFKTKLNGVKQLY
                     HTVRNDFDRPIYLPTDMRPAQAICEQCHWPKKYVGNVDRTFQHYLSDEKNTPFAVRLL
                     LNVGGGDPSNGPVGGIHWHMNIANKIEYIATDGQLLKIPWVRMTNAQGATTEYRDPDF
                     REDLSKYQVRQMSCLDCHSRPAHKVHTPNEAVELALMTGRLDPSTPWVKSKVVAALVK
                     PYSTKAEAEQGIANDLRAAYPDPAQANTIVGVAQAIYRENFFPEVKVDWRTYPDFVGH
                     KNWNGCFRCHDGKHVSADGNRSIKASDCNSCHLILAQGTGEALQQISAKGYDFMHIDA
                     PYAEFSCTDCHTGGVQKE"
BASE COUNT         1200 a         1541 c         1510 g         1171 t
ORIGIN      
        1 catgaacccg taggaatgca aacccacgcc gagcatgttt acgccgaacc acgagaaact
       61 ggtcacgata ttgccgaata gcgccatgat catcagaccg cgttgccgga tgaacccacc
      121 ccagcgagcg tgcaaagtga ttgcgcacca aaggacgatc agcaccgcgc cgttttcttt
      181 gggatcccag ccccagaacc gtccccacga ttgatcggcc cagatgccgc cgaggactgt
      241 gccgacgaaa ctgaacaggg tcgcgaaaca aacgacgccg tacgtcatgc gcgccagcga
      301 atccgcagtt tgctttttta acgagcgcgt gaacacgccg cgcacgacgt agatgatggc
      361 aagcataccg gcgagaaaca tggcggagta acccgtggtg atcgcgacta cgtgagtcgc
      421 gagccagatg ttggtgtcga gcaccgcctg taacatttcc aaggtgtcgc cgctaccggc
      481 gagatggtgc gcgatgatta aggtcacaaa accaattgcg cccgcgcacg ccgcgccgat
      541 gccatctttg aaaatgcgtt caagtatcag cgcgacaatg actgcgcccc agccaatgaa
      601 aattgccgat gaatacagat tggtgaccgg cggacgttct tgcagataca tccgcgaaac
      661 cagaccaaat gtgtgaatag caatcgcgag cagcaaaacg tagaaagccg aacgtctgag
      721 tgcgctgctc catccaagcc atgacgcaca cgccagcaga aacgcgagca cgtaaagcgc
      781 catgctttgg ctgaagggct gaagccgatt gaacaaaaac tcgaacgacg cgcgcttcgt
      841 cgcctttggc tgggctttgg cgaaccaatc agtaacgagc tgcacatgtt gattgaagag
      901 catccggtca tccgcgcgat atgcatcgcc gatgacggcg tattcgttca caattggatg
      961 aatttcgccg gtgcccacag agcgaagcaa actgtcgccg acagaatgcc actgatcatt
     1021 ttgggcgatc ggcggaacag ccaggacata tgccatctcc gacagtcgtt cgtaacgctg
     1081 aatcatggca gcgacgtcat cgagtttcgc tttgtcgaaa ttgtcgccca tcgaacgttc
     1141 acgggctgcc tttgctgcac cggggacagt gctttcgaag cggtgaagtt cggcagcgaa
     1201 attctgtgct ccttccggtt gaatgctgtt cttcaggcgc tgatagatcg agaggccgtt
     1261 gcgcagattc aggatcgcgc tttgataagc ggagcgctgg actgcttcga gcttgtcgga
     1321 ttgcgcggct tgttcatcaa tctgtttcaa aaaaggcgta aagtcggcga agctaaaata
     1381 tttccggtcg ctctgttgcc aaccaaacag gccgagcacg tcggcgtttt gcacaacgaa
     1441 cacgggatat tgatcggcaa cgggagcatt gaacaggacg tcggtgagcc actgcatcgc
     1501 gctgagtcgc gtgccgcctt cgaggcgcag ttcctgtttt ccgtgaatga tcaggagcga
     1561 attacgcgca acggtgtcca gcggtttgac ccgacctcct acgagtacgg ggaactctcc
     1621 aaacatgctt aaatcgaaat cgtccttcgc cgcttttcga ggcagccaat tggcggcgat
     1681 cgatgccgcc gcgacagcca ggataatcca gggtaaaaaa cgtttcatgc gattgccctc
     1741 cgccgttgcc gcgaaaatcc cacgaggtgg aaaccaaatt gcaccagcag accagctgcg
     1801 acaatcacac acgccacgta aggcgcaatg aaactcggat tgcgcaccac ctgcaaaatt
     1861 gtcgcggaat cgtctggttg aaaccctgcc tggtaatatg tttccccgcg ataacggagc
     1921 ggatgattca tataaatcaa agcgtcgcgg tccacggagc gctccggatc gatcaaggtg
     1981 actttgcttg agaaattctt cgggatttca gtcccggcgt atttttcgtg cgtgaacttc
     2041 tgcaaggtca cgctgtaagg tttgtagtag cgcgcgggcc gcagcgcgat catccatgta
     2101 cggccgccgc atgcaaaggt ctgcggagcg ccaagcgcat ccgaaaccag ccacgtgcct
     2161 aacgaaccgc cgtccttcgg cagaatttcg agtgccgcgc tcgggacatc gcgctcgtcg
     2221 gcagcggttg cgcgcacggc gggctcgact gcgatcattg cgccggggcc ctgattggcg
     2281 atcggttgcg cgccttcgcc cgcctggctc aacattttca gccgcgaatt ttgataaaag
     2341 tttctgaccg caatccggaa cggcaaactc cagtgatcga tcacccggtt gtgccgcagc
     2401 acgctctcgg gaatcgccgt cacctgatcg aggtcctcgc cgcttgtgtc gatcacggcc
     2461 agttccgtct cacgcgtatc ctcggagaaa tttttggtgt cgccgttcgc cagacgcatg
     2521 tggctctcca ccgcgaataa atcagtgaac agcccgccgg cgagcatgat gatcaacccg
     2581 gcgtgcgtga gatggatccc cagtttccgc cagctccagc ggaaacgttt caggtgagcg
     2641 gcgattagat tgatcagcag cacggcgccg atgagatgcc cgccagggaa aatggggatg
     2701 ctgaatcctc gtccctccgg cggccaccac acaaacatac tttggaaata acgctgctgc
     2761 gcttcatgga tcccgagatg cacctgcgcc agcgtgccgg caaaaatcag cgccatcccc
     2821 gccgccagac aaacaatcgt tagcttcagc gatgtgatca gatcgatcag cttgtggagc
     2881 atgcttccta aaatcgaaca gattcgatga atttcacgaa attcggtttc tctttctcaa
     2941 ctgacgtatt tggcccagtt gctttgaaga accagacacg tccgtcgcgg cgcgtccagg
     3001 ccgcaatggt acgcgttttg ttaccagcaa tgtcggtggc ggagaatgtc gtgtctccgg
     3061 ttttgaactc agtgacttgc gaggtcaccg cgttcgcatc cacgggcgct agacccattt
     3121 gtccgcgcca ccggttgatg ttatcggcat cgcttcctcc atcgccgggg aacgtcacaa
     3181 cggagatgtc gattttgccg ccatcgtccg cgggcgcgct gaagctggcg tagcgcatgg
     3241 aggacggcgg cacttctgtc cagccttcgg gtgttgtcca tttaattggg ggcgggcttg
     3301 tcgtttgcgg cggcgcccct gccatttgcg gcggtccggt ttgggtctgt gcatcacaaa
     3361 ctgctgcgac ccatttaatg aagtcgcctt tttgcgcctc agtgagatct gcattgcccc
     3421 gcatcttaaa aaacagcgtc gaattgccgg tagtcaccat tgcggcaacg attctgccat
     3481 ctctagccgg gtcggcgttg tcgggcaatc ctgcgaggtc gacgatggtc acgtcgccta
     3541 acgaagtatg cagtcgttgt gctatctcgc cgagtttctg ttcggtgatt ggcggttggc
     3601 cgagttgacc cagccagcgg ttcacattct ctagaacatt tcccgcagcg gagcccagac
     3661 tcacaaatga aacgtccgca acggcgccgt tatcgccttt aaccagaaaa cttgcctgcc
     3721 gcatttgcga gagcggttgc gcttcccaat tcggcggagt cgtcacggcc gtttccgctg
     3781 tcggcgcgag tccactgggc atccgaggcg cggtcgtgtt cgtcggcatg gcatcgtgct
     3841 gctgaggctc agattcttcc agaggcgcct ttgaaacgcg atataccttg atctccgagt
     3901 ttttgtcgca ggctgccagc gcagcgaaaa gcgcaacgca aacgacaaca gccttgatac
     3961 ctgcccaatt gtactgttgc ggctgaccca ataaccccat tgtcacgaga tacgattact
     4021 ctttctgaac tccgccggta tggcaatcgg tgcatgagaa ttccgcatac ggagcgtcga
     4081 tatgcatgaa gtcgtacccc tttgcgctaa tctgctggag tgcttcaccg gtgccttgcg
     4141 ccagaataag gtgacacgag ttgcagtcgc tggctttgat cgacctgttc ccatcggcac
     4201 taacgtgttt gccgtcgtgg cagcggaaac agccgttcca atttttgtgt ccaacaaaat
     4261 ccggatacgt ccgccaatcg accttgactt ccgggaaaaa attctcgcga taaatcgcct
     4321 gcgccacacc gacgatcgtg ttcgcctgcg cgggatcggg atacgctgcg cgcagatcat
     4381 ttgcgatccc ctgctcagct tcggctttcg tagagtacgg tttgaccaac gcggcgacca
     4441 ctttggattt cacccagggc gtgctgggat cgagacggcc ggtcattagc gccaactcaa
     4501 ccgcttcgtt aggcgtgtgc actttgtgag cgggccggct gtgacaatcc aggcaactca
     4561 tttgccgaac ctgatatttg gagaggtcct ctctaaaatc cggatcgcga tactcggtcg
     4621 tcgctccttg cgcattcgtc attctcaccc acggaatttt cagaagctgc ccgtcggtgg
     4681 cgatgtattc gatcttgttc gcgatgttca tgtgccaatg aatcccgccc accggcccgt
     4741 tcgacggatc gccgccgcca acgttgagca gaagccgcac agcgaacggt gtgtttttct
     4801 cgtccgataa gtaatgctga aacgtgcgat cgacgttgcc gacgtatttc ttcggccagt
     4861 gacactgctc gcagattgct tgagccggac gcatgtccgt tggcaggtaa atcggacgat
     4921 cgaagtcgtt acgaacggtg tgataaagtt gtttcacccc gttgagcttc gtcttgaagt
     4981 atgcggccgc gcctgggccg acgtgacacg ccgcgcactc aacactggca tgtgcagtgt
     5041 gttgataggc cacgtattgc ggcgtcatcg gtagatgaca agtcttgcca caaaaggcta
     5101 ccgactcggt gtaatgatac gtttcgtaac taccaagcgc agtgacaaac aaaaatgcca
     5161 tgctgccgaa cccaaataac gcaagaattc ttcggtcgcg cggccgcgac aaatctattt
     5221 tgatggcaag gggctcggcg gcttgcacag ctcgtcgccg tgtgcgccaa cgaataatcg
     5281 caccaaggaa ggcgagaaaa attccgagaa ggaagaatag tggcgcaatc aagtacgcca
     5341 ggatgccgac gtaaggattg ggatggctgg cgatgagatc gatcgcgaag aggagacaaa
     5401 aggcgaaaag cgcactcgca gc
//
LOCUS       DATDAJ010000108         3939 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_672474, whole genome shotgun sequence.
ACCESSION   DATDAJ010000108 DATDAJ010000000
VERSION     DATDAJ010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3939
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672474"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VIS53_02540"
     CDS             complement(<1..365)
                     /locus_tag="VIS53_02540"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5766695.1"
                     /translation="MPRVLIIEDDAENRRVMAQFFKREDWNVLEASDGDAGLELALRN
                     RPELILCDLLMPKSNGFEVCRSIREQLQPTKIIVVSGRDYGVDRTSALEAGADEYLLK
                     PITWELLSGTIDRLLPKIPR"
     gene            complement(461..2536)
                     /locus_tag="VIS53_02545"
     CDS             complement(461..2536)
                     /locus_tag="VIS53_02545"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEY5766696.1"
                     /translation="MIFLALSILTAGVPLSMVCAVIGLAAAFYLIGVVVRSPAGNQRM
                     QEIAGAVQEGAKAYLNRQVITISFIAIIIFILLFIFKDRPTAIGFVIGAFCSLSAGFI
                     GMRIAVVANVRTTQAATESINKALRMAFNGGAVTGLLVVGLALLSVSIFYTLVTRIAG
                     SHMAINSLVGLALGASLISVFARLGGGIYTKAADVGADLVGKIEKGLEEDDPRNPATI
                     ADNVGDNVGDCAGMAADVFETYAVSLIGAILVGALTLPGNSAAVIYPFVLGGISVLGA
                     ILGVLFVNFVGGKPANVLMGGVVTSAIVSAVLFWPATHYLFPTGVMIADKMRSPTQLY
                     WASLVGIMMTAVVVVITNYYTSMHYRPVQKIARASETGHATNIIAGLAVGQHATALPV
                     GFIAIAILLSFHFGGLYGIAIAVMAMLSMAGIIISLDSFGPITDNAGGIAVMSNLPNE
                     VRNVTDQLDAVGNTMKAVTKGYAIASAGLAALVLFGSYVQELKAHVTRNGEPFVFDFS
                     LTDPKVIIGLFLGGLLPFIFTAFSMDAVGKAAGAVVREVRRQLQAHPGIMTGKDTPEY
                     GTCVDIVTKAALREMIVPALLPLIFVVAVAVIPQLGPVVLGGLLVGTIVTGLFVAIAM
                     TSGGGAWDNAKKFIEEGNLGGKGSFAHAAAITGDTVGDPYKDTAGPAINPMIKVVNIL
                     AILIIPIFF"
     gene            complement(2594..3559)
                     /locus_tag="VIS53_02550"
     CDS             complement(2594..3559)
                     /locus_tag="VIS53_02550"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY5766697.1"
                     /translation="MNAQFPDEETKSGEFKRQDDAFRDWISNDGSTLYAAEGGRYHLY
                     VSLACPWASRTVIVRKLKGLEDAIGLTVIDPVRDDLGWAFRDTSGKIPPGAPFESTDP
                     INGFQFLSEAYTATDPNYNERVTVPVLWDTKTRRIVNNCEDDICRMFNDVFNDFARNK
                     TVDLFPKEIQAAHAKLSDFIYDNVNNGVYRAGFATRQRPYERACRRVFEALDELEPRL
                     SKNRYLFANRIVEADWRLFCTLVRFDAVYHGHFKCNLRRIIDYPNLQGYLMDLYQQPG
                     IAETVNLDHIKRHYYMTHTAINPTRIFPIGPLLDLTKPHGRERLN"
BASE COUNT          912 a         1110 c         1076 g          841 t
ORIGIN      
        1 cgcgggattt tcggcaggag ccggtcgatc gtgcccgaga gcagttccca cgtgatcggt
       61 ttgagcagat attcatctgc gcctgcttca agagcgctgg ttcgatcaac tccgtaatcg
      121 cggcctgaaa cgacgatgat cttggttggt tgcagttgct cgcgaatgga gcggcatacc
      181 tcaaagccgt tcgattttgg cattaacaaa tcgcacagga tcagctccgg ccgattgcgc
      241 aaagccagct ccagccctgc atcaccgtcg cttgcttcca ggacattcca gtcttctcgc
      301 ttgaaaaact gtgccattac acgccggttc tcggcgtcgt cttcgatgat taagacgcga
      361 ggcattgtgg ggggaagaaa actgctcagt actttcgctt aaagcaagct taaatcaaaa
      421 gcagcaattc tttttttcca aggcagttgc tcaactttgt ctaaaagaaa atcggaatga
      481 ttaaaatcgc gagaatattg actaccttga tcatcggatt gatcgcgggt ccggccgtgt
      541 ccttgtacgg atcgcctacg gtgtcgccgg tgatcgcagc ggcatgagca aaggagcctt
      601 tgccaccgag atttccttcc tcgatgaatt ttttcgcgtt atcccacgcg ccgccgccgg
      661 aggtcatggc aatggcaaca aacaggccgg tgacaatcgt tcccaccagc aatcccccga
      721 gcacgaccgg gcccagttgc ggaatcacgg ccactgccac cacgaaaatc agcggcagca
      781 gcgctggtac gatcatttcg cgcaatgccg ctttggtcac gatgtcaacg cacgtcccgt
      841 actcaggcgt gtccttccca gtcatgatgc cgggatgcgc ctgcagttgc cgccgcacct
      901 cacgaacaac ggctccggcg gctttgccca ctgcgtccat gctgaacgcg gtgaagatga
      961 acggaagcaa tccaccgagg aacaaaccga taatcacctt cggatcggta agcgaaaagt
     1021 cgaacacgaa cggttcgcca ttgcgtgtta cgtgtgcctt gagctcctgt acgtatgagc
     1081 caaataaaac cagcgctgcg agaccggctg aagcaatggc gtaccccttg gttacggctt
     1141 tcattgtgtt gcccaccgcg tccagttgat cggtgacatt gcgtacttcg ttaggcaagt
     1201 tgctcatcac cgcgatgccg cccgcgttgt cagtaatggg accgaacgaa tcgagcgaga
     1261 tgatgatccc ggccatggac agcatcgcca tcactgcgat cgcgattccg tagagcccgc
     1321 caaaatgaaa actcagcaag atagcgattg cgatgaagcc caccggcagc gcggtagcgt
     1381 gctgaccaac agccaggccc gcgataatgt tcgtcgcatg accagtctct gaggcacggg
     1441 caattttttg cacgggccgg taatgcatcg acgtgtagta attggtgata accacgacga
     1501 cggctgtcat catgataccg accagcgatg cccaatacag ttgagtcggt gagcgcattt
     1561 tgtcggcgat catcacgccg gtcggaaaca gataatgcgt ggcaggccag aagaggacgg
     1621 ccgaaacgat cgcactcgtc accacgccac ccatcaacac attggccggt tttccgccga
     1681 caaagttcac gaacagcacg cccaggatcg cgcccagcac ggaaattccg ccgagcacga
     1741 atgggtaaat cacagccgcc gagttgcccg gcaacgtcag tgcgccaaca aggatcgcgc
     1801 ctatcaagct cactgcatac gtctcaaaca catcggccgc catgcccgcg caatcgccca
     1861 cgttgtcgcc aacgttgtct gcgatcgttg ccgggttacg cggatcatct tcttcgaggc
     1921 ccttctcgat cttgcccaca aggtccgctc cgacgtcggc cgccttggtg tagatcccgc
     1981 cgccgagtcg cgcgaacacg ctgatgagac tagccccgag ggcgagacca accagactat
     2041 tgatcgccat gtgcgagcca gcgatacgcg tgaccagagt gtagaaaatc gataccgaca
     2101 gcagcgcgag ccccactacg agcagtccgg tgacggcgcc tccgttgaag gccattcgca
     2161 atgctttgtt aattgactct gtcgcggcct gcgtcgtccg cacgttggcc accacggcga
     2221 tacgcattcc aatgaaaccg gccgaaagcg aacaaaacgc cccgattaca aagccaatcg
     2281 ctgtcggacg atctttgaaa atgaaaagca aaatgaaaat gattatggcg ataaagctga
     2341 tcgtgattac ttgccgattc agatacgcct tggcgccttc ctgaacggct ccggcgatct
     2401 cttgcatccg ttgattgcct gcgggcgacc gaactaccac gccgattaaa taaaacgcgg
     2461 cggcgagacc gattaccgcg cagaccatgg acagtggcac gccggcggta aggatgctta
     2521 aggcgagaaa aatcatggtc ggatcaggct gaagcgcacg attctatgaa gaattgctgt
     2581 cgtggcaact gccttagttc aatctttcgc gaccgtgcgg tttcgttagg tcgagcagcg
     2641 gaccaatagg aaagatgcga gtcgggttga tcgccgtgtg cgtcatgtag taatgccgct
     2701 tgatgtgatc caggttgacc gtctcggcga tgccgggctg ctgatacaag tccatcaggt
     2761 agccctgcag gtttggataa tcgatgatgc gccgcaggtt gcatttgaaa tggccgtgat
     2821 aaaccgcgtc aaaacgcacg agcgtgcaaa ataatcgcca gtccgcctcg acaatgcggt
     2881 tcgcgaatag atatcgattt ttcgacaaac gcggttcgag ctcatcaagc gcttcaaaaa
     2941 ctcgacggca ggcgcgctcg tacgggcgct ggcgcgtggc gaatcctgct ctgtaaacac
     3001 cattgttcac gttgtcgtag atgaaatcgg agagcttcgc atgggcggct tggatttctt
     3061 ttgggaacag atcgacggtt ttatttcgtg caaagtcgtt aaacacgtcg ttgaacatgc
     3121 ggcagatgtc gtcctcgcaa ttgttcacaa tccgccttgt cttcgtatcc cacagcacag
     3181 gtacagtcac ccgctcgttg taattgggat cggtagctgt gtatgcttcg ctcaagaatt
     3241 ggaagccgtt gattggatcg gtggattcaa acggcgcacc aggcgggatc ttgccggaag
     3301 tatcgcgaaa cgcccagccc aagtcgtctc gaaccggatc aatgacggtc aagccgattg
     3361 cgtcttcgag tccttttaat ttccgaacga tgaccgtccg actcgcccat gggcaggcca
     3421 gcgaaacgta aaggtgatag cggcctccct cggcagcgta aagtgtcgag ccgtcatttg
     3481 agatccaatc gcgaaacgcg tcgtcctggc gtttgaattc tccggactta gtctcctcgt
     3541 ctggaaattg tgcgttcata caagtacgaa tccgccttcg cacgaggcta cggcgggata
     3601 aatgggacac gaatgagcac gaatgcaaag ccagaagtca tcagcggcgg ttgctcgcgg
     3661 gggcccactc acgttgacac ggaaaacggc cagtgatagc gtcggccaaa tttacgcgga
     3721 agtccgtaaa aggcgggcga tgacgcggtt accgttccag acttgcacac gttattgaac
     3781 agtcaggttt tggtgctcaa ccggctctgg caggcggtga acatctgctc tgctcgccgc
     3841 gccttttcgc tcgtatacgc ggggcacgcc caaattgttt cttcggatga cgcgaacaac
     3901 ttttcgacgc acgatttcga aagctggcgc gatctgtcc
//
LOCUS       DATDAJ010000109         5558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_672762, whole genome shotgun sequence.
ACCESSION   DATDAJ010000109 DATDAJ010000000
VERSION     DATDAJ010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5558
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672762"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..668)
                     /locus_tag="VIS53_02555"
     CDS             complement(33..668)
                     /locus_tag="VIS53_02555"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEY5766698.1"
                     /translation="MNRCISLAVMTCSLLYASLLHAEPKAILVFGDSLSEGFMLKHSE
                     AYPALLAKKLRAAGLNFSVTNASATGGTTDGGLERLPPHLKHRIDILILELGINDAFR
                     GLPIDQIQSNLQQIIDKVKAKNPNARVVIAGIQLPGYAADDYVSAFGQMFADLVAKNR
                     AALVPYLLEGVAGNPSLNLSDGIHPNAAGQKVLAENVWRVLEPLAREVAAR"
     gene            942..1940
                     /gene="gap"
                     /locus_tag="VIS53_02560"
     CDS             942..1940
                     /gene="gap"
                     /locus_tag="VIS53_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY5766699.1"
                     /translation="MANFAINGFGRIGRNVLRAMSQKQVERVVAVNDLTDTHTLAHLL
                     KWDSVHGKFDGEIGYDDENIIVRGHKIKVLKDRDPANLPWKKLGIDVVLESTGLFTNR
                     DKAELHLKAGAKRVLISAPAKDPDVTICVGVNDNVFDPNKDKIVSNASCTTNCLAPMA
                     KVLNDTFGITHGFMSTIHSYTNDQRILDFPHKDLRRARSAAINIIPSTTGAAKAIGEV
                     IPALKGKLNGGAFRVPTPDGSVTDFTAVLEKDATMDTINAAFKEAASDKSYKGVLEFS
                     DEPLVSEDIVGNPHSCIFDSKLTLTMGNRFVKVVGWYDNEWGYSNRCVELMEMLAE"
     gene            1981..2406
                     /locus_tag="VIS53_02565"
     CDS             1981..2406
                     /locus_tag="VIS53_02565"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5766700.1"
                     /translation="MKIYFDHEKLDVYHEAIAFCGWVGELLSEISAKAAAKDQQDRAS
                     TSLPLNIAEGNGKFSRVDRARFLEIARGSTLECAACLDVLEVRKLVAAERILAAKERL
                     VGIVNMLMGMLKRFSGRAEFLREDEGLYGVERDQEQEHE"
     gene            2416..3624
                     /locus_tag="VIS53_02570"
     CDS             2416..3624
                     /locus_tag="VIS53_02570"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001036338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY5766701.1"
                     /translation="MTKLTLRDLDVRGKRVLVRVDFNVPTEVRGGKLRVTDDTRIRES
                     LPTINYLREHGAKTILMSHFGRPKGKPVEKYSLRPIGEYLHSLIHHPVIFSHDTIGNV
                     PTKIVEHMENGDVALLENVRFQPGEEANDAEFAKALAELGDLYVNDAFGAAHRAHAST
                     AGITKCVQKSAMGLLMEKELKHLRDELQDPATPFVVVLGGAKVSDKIGVLKALMEKAN
                     TILIGGAMANTFLKAEGIPVGASRVESDKIDLAHELLELAKQRGVKFLIPIDVVEADE
                     ILPGANMRNTSRLSPQHGITDGWQAVDIGAATIALYQEEIATGETILWNGPMGVFEIP
                     EFGEGTIAIAEAMAQLGATTIIGGGDSVTAVKQAGLAAKMTFISTGGGATLELLEGKE
                     LPGVAALTDK"
     gene            3733..4500
                     /gene="tpiA"
                     /locus_tag="VIS53_02575"
     CDS             3733..4500
                     /gene="tpiA"
                     /locus_tag="VIS53_02575"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002144919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEY5766702.1"
                     /translation="MRKKIIAANWKMNMTQAESARFVESLLLRGVGEINDVEVVIVPP
                     FTAIAKVTEALGNAQNIKVGAQNMYWEKNGPYTGEISAALLRDLFVHYVVLGHSERRT
                     LFGETDEIVNRKVRAAHEATLRPIVCIGETLEQRDRGNVDKILSIQLRGSLAGLTPKE
                     LQETVIAYEPVWAIGTGRNATPAQAQEAHAFIRHTLHKMADDATAERVRIQYGGSVKP
                     ENARELMSQPDIDGALVGGASLDPRSFAQIVKAAREE"
     gene            complement(4711..5406)
                     /locus_tag="VIS53_02580"
     CDS             complement(4711..5406)
                     /locus_tag="VIS53_02580"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5766703.1"
                     /translation="MNNTGSGNTALGYLAGSNLTTGDDNICIGNVGVAGDGGTIRIGE
                     SFIGATYIAGISGQTASGGVAVFVNSDGKLGTSTSSARFKDEIKPMGKASEAILALRP
                     VTFLYKKEIDPQGIPQFGLVGEDVEKVNPDLVVRDKDGKVNTVRYEQINAMLLNEFLK
                     EHDRIEAQQNKIEEQDLTIGQLKSTLAQQQKRFESKFAQQKQQITALTADLQKLAAGI
                     ELNKTESQALAEK"
BASE COUNT         1304 a         1465 c         1545 g         1244 t
ORIGIN      
        1 atctgcccgt cggcggttca ggtgaattgc ccctaccgcg ccgccacttc gcgcgccagc
       61 ggttcgagca cgcgccagac gttttcagca aggacctttt gaccggctgc attcggatga
      121 atgccgtcgg acaaattcaa cgaaggattg cctgccacgc cttcaagcaa atagggcacc
      181 aacgccgctc gatttttcgc cactaaatca gcaaacattt ggccaaatgc ggaaacgtaa
      241 tcgtcagccg cataacctgg cagttggatt cctgcgatca ctacgcgcgc atttggattt
      301 ttcgctttca ccttgtcaat gatctgttgg agattgctct ggatttggtc gatcggcagg
      361 ccacgaaagg cgtcgttgat ccccagctcc agaatcaaaa tgtcgattct gtgctttaaa
      421 tgggggggta accgttccaa gcccccgtca gttgtaccgc cggtcgcgct cgcgttggtc
      481 actgaaaagt tcagacccgc cgcacgcaac ttttttgcaa gtaaagccgg gtaagcttcg
      541 ctgtgtttga gcataaaccc ctctgacaaa ctgtcgccga aaaccagaat ggctttcggt
      601 tcggcatgga ggagcgaagc gtacaagagt gaacacgtca taacagcgag tgaaatgcac
      661 cggttcatag caaaactctc aatagcattt atcggtttgt cgccgttaat tgcgtgctct
      721 gtctcattct gagcgaagcg aagaatctct gatgtttttc gtctcgcacc acgcggatag
      781 ataatcagag atgtttgaaa gcctggcctc atgcttcgca tttcgttgca gcgctccgct
      841 caacatgaca gtgaacggga acgttctgtt tactaaacac acgagttgga cgttgaagct
      901 tttccgcgta acggtttaat tcttcaaatt caactcatcc tatggctaat tttgctatca
      961 acggtttcgg gcgcatcggc cgcaacgtcc ttcgcgccat gtcacaaaaa caggtagagc
     1021 gtgttgtagc ggtgaacgat ctcaccgaca cgcataccct ggcgcatctg ctcaagtggg
     1081 attcggtgca cggtaaattc gacggcgaga tcgggtacga cgacgaaaat atcatcgtgc
     1141 gcggtcacaa aattaaggtt ttgaaggatc gcgatccagc gaatctcccg tggaaaaaac
     1201 tgggcatcga tgtggtgctc gaatcgaccg gcttgttcac caatcgggat aaggccgagc
     1261 tgcacttgaa ggccggtgcg aaacgtgtgt tgatcagcgc gccagcaaaa gatccggacg
     1321 tgacgatttg cgtcggcgtg aacgacaacg tcttcgatcc caacaaggac aaaatcgtgt
     1381 ccaacgccag ttgcacaacg aactgtctcg cgcccatggc gaaagtgttg aatgacacat
     1441 tcgggatcac gcacggattc atgagcacga tccacagtta taccaacgac cagcgtattc
     1501 tcgattttcc gcacaaggac ctgcgacgcg cgcgctctgc tgcaatcaac atcatcccgt
     1561 ccacgactgg cgctgcaaaa gcgatcggcg aagtaattcc agcgctcaag ggaaaactaa
     1621 atggcggcgc gttccgggtg ccgacgccgg atggttcggt gacggatttc accgccgtgc
     1681 tggaaaaaga cgcgaccatg gacacgatca atgctgcgtt caaggaagcg gcgtcagata
     1741 aaagctacaa aggcgtgctc gagttcagcg atgagccgct cgtttccgag gacatcgtcg
     1801 gcaatccgca ctcctgcatc ttcgatagca aactcactct gacgatgggc aatcgcttcg
     1861 tgaaggtggt cggctggtat gataatgaat ggggctacag caatcgctgc gtggagttga
     1921 tggaaatgct ggcggaataa tcgatcttgc tcatgctctt gctcctgctc atgatcaagt
     1981 atgaaaatct acttcgacca tgaaaaactg gacgtttatc acgaagcgat tgctttttgt
     2041 ggctgggtcg gagaattgct gagtgaaatt tcagctaaag cagctgccaa agatcagcag
     2101 gatcgcgctt cgaccagtct tcccctgaat atcgcggaag gaaatggcaa gttctccagg
     2161 gttgatcgtg ctcgctttct ggaaatcgcg cgcggttcaa cactggagtg tgctgcatgc
     2221 ctcgatgtgc ttgaggtgcg aaagcttgtt gctgctgaac ggatccttgc tgcaaaggaa
     2281 aggctcgtcg gaatcgtgaa catgctcatg ggaatgctga agagattttc tggacgagcg
     2341 gagttcttgc gtgaagacga aggactttac ggggttgagc gtgatcagga gcaggagcat
     2401 gagtaggagg aaataatgac gaaactcact ctccgtgatc tcgacgtccg cgggaaacgc
     2461 gtgctggtgc gggtggattt caacgtgccg acggaagttc gcggcggcaa acttcgcgtg
     2521 actgatgaca cccgaatccg cgaaagcctg ccgaccatca attaccttcg cgaacacgga
     2581 gcgaaaacca ttttgatgtc gcatttcggc cggcccaagg ggaagccggt tgagaaatat
     2641 tcgcttcggc caatcggcga atatttgcat tccctgatcc atcaccccgt cattttcagt
     2701 cacgacacca ttggcaacgt gcccacgaag attgttgagc acatggagaa cggcgatgtc
     2761 gcgcttctcg agaatgttcg gtttcaacca ggtgaggaag cgaatgatgc agaattcgcc
     2821 aaggccctcg ccgagttggg tgatctttac gtgaacgatg ctttcggcgc cgcgcaccgg
     2881 gcgcatgcgt caacggcggg cataacaaaa tgcgtgcaga aatcggccat gggccttttg
     2941 atggagaaag aactgaagca tctgcgcgac gaacttcagg atccggccac accgttcgtc
     3001 gtcgttttag gtggcgccaa ggtgtcggac aaaatcggtg ttctgaaagc gttgatggaa
     3061 aaagccaaca cgattctcat cggcggcgcc atggcgaaca cgtttttgaa agcggaggga
     3121 attccagtcg gcgcgagccg cgttgaatct gacaagatcg atctcgcgca cgagcttttg
     3181 gagttggcga agcagcgcgg cgtgaagttt ctcattccaa ttgatgtggt cgaggcagat
     3241 gaaattctgc cgggcgcgaa catgcgaaac accagccgtc tctcgcccca gcacggaatc
     3301 acagacgggt ggcaggcggt ggatattggc gcggcaacga tcgcgcttta tcaggaagaa
     3361 attgccacgg gagaaacgat tttgtggaac ggaccgatgg gcgtttttga aattcctgaa
     3421 ttcggcgaag gcacaatcgc aatcgcagaa gcaatggcac aattaggggc gacgaccatc
     3481 attggcggcg gcgattcggt gaccgcggtc aaacaggccg gcctcgccgc gaagatgacg
     3541 tttatttcca ccggcggcgg cgcaacgctc gaattgctcg aaggcaaaga gctgcctggt
     3601 gttgctgcgc tgacggacaa ataacatgcg tcattacgag cgaagtcgag gaatcccgat
     3661 gaatcactgc acgatttcgc cgcggggtcc ctcgacttcg ctacgcttcg ctcgggatga
     3721 cgggtaaatc cgatgcgcaa gaagatcatt gcagccaatt ggaagatgaa catgacgcag
     3781 gccgagtcgg cccgatttgt ggagtcgttg ttgcttcggg gcgtaggcga aatcaacgat
     3841 gttgaagtgg tgatcgttcc gccgttcacc gcaattgcga aagtgaccga agcattaggt
     3901 aacgcgcaga acataaaggt cggcgcgcaa aacatgtatt gggagaagaa cgggccgtat
     3961 accggcgaga tcagtgctgc gcttttgcgc gacttatttg tgcattacgt cgtgctcggg
     4021 cacagcgaac gccgtacgtt gttcggtgag actgacgaaa tcgtgaatcg caaagtgcgc
     4081 gccgcgcacg aggcgacgct gcgtcctatt gtttgtattg gagaaacgct cgaacagcgg
     4141 gatagaggca atgtggacaa gatattatcg atccaattgc gtggcagtct cgctggcctc
     4201 accccaaagg aattgcagga aacggtgatt gcgtatgagc cggtctgggc aatcggcacg
     4261 ggccgcaacg cgacgcccgc tcaggcgcag gaagcccacg cattcattcg ccacactttg
     4321 cacaaaatgg ccgatgacgc gacggccgaa cgtgtccgca ttcagtacgg cgggagcgtt
     4381 aaaccggaga atgcccgcga actcatgagc cagcccgaca tcgacggcgc cctcgtcggc
     4441 ggcgccagcc ttgacccgcg cagctttgcc caaatcgtca aagcggcgcg cgaagagtag
     4501 cacgcgcttc aatcttctgc gccaacggcg cagcctcatt tcgtctgtca tgttcagcga
     4561 agcaaaacat ctctggatga aaacgtgcgc taccaaaatc ggacatctca gatggaaagc
     4621 ctggcctcgc cccgaaagtc ttcgggtcct gcgttgcagc ttcgcgtcat tcagaatgac
     4681 aaacacaccg cacaaccaag atgggctgtg ctatttctcg gcgagtgctt gcgattccgt
     4741 cttattcaat tcaatgccgg cggcgagttt ctgaaggtcc gccgtcagag ctgtaatttg
     4801 ctgtttttgt tgcgcgaact ttgactcaaa tcttttctgc tgctgcgcca acgtcgattt
     4861 caactggccg atagtcaggt cctgctcctc aattttattc tgctgtgcct cgattctgtc
     4921 gtgctctttg agaaactcat tcagcaacat cgcgttgatc tgctcgtagc gcacagtatt
     4981 gaccttgccg tccttatcgc ggaccaccag gtcgggattg accttttcca catcctcccc
     5041 aaccagccca aactgcggga tgccctgcgg atcgatctct ttcttataaa ggaaggtcac
     5101 cggacgcagc gccagaatgg cttcgctggc tttgcccatc ggcttaatct catccttgaa
     5161 ccgggccgag gaggtgctcg tgccaagctt tccgtctgaa ttgacaaaga ccgcaacgcc
     5221 tccggaggct gtttgtccac tgattccggc aatgtaggtg gcgccgatga aagattcgcc
     5281 gatgcgaatc gtgccgccat cgccggcaac gcccacgttg ccgatacaga tattgtcatc
     5341 gccggtggta agattagacc cggccaaata ccccaaggca gtgttgccgc tgccggtgtt
     5401 gttcaagagc gcttgataac cgctggccgt gttgcggatc ccttgagttg gttttctgaa
     5461 tctggtttca tcggtgtcta tccgtgacca taactctttc gtggattgaa accaattaat
     5521 cagccacaga tagacacaga tttctggtca ctacccgc
//
LOCUS       DATDAJ010000110         3230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_698198, whole genome shotgun sequence.
ACCESSION   DATDAJ010000110 DATDAJ010000000
VERSION     DATDAJ010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698198"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="VIS53_02585"
     CDS             complement(<1..875)
                     /locus_tag="VIS53_02585"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY5766704.1"
                     /translation="MNLLTLTEIRQATQNGATSARVHVQVESARPKLTREQQPYCELT
                     LADACDRMTLRVWSDHPAYKACSALTNQDFIELTAEFYQSQYGLDARKWTVRPLTEQE
                     KNELLQGPADLRAKQATDFELVKQTMAGISDPRLLALAEAFLSEWGDRFRRTAAARNY
                     HHARRGGLVEHTAQMMRVARQVAPLYPELNLDLLLTGILFHDSGKLWENALPENGFVM
                     SYDELGELMGHISIGLELVNALWRRLSVENADAWKNLTPASEDVRMHLLHLIGAHHGE
                     PEFGSPVSPKTPEAMA"
     gene            1069..2238
                     /locus_tag="VIS53_02590"
     CDS             1069..2238
                     /locus_tag="VIS53_02590"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF006050.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY5766705.1"
                     /translation="MFLTHLECSACGREHEWSRLQNLCRSCNKPLFAIVDLAAASRTL
                     NRETLLAREKSLWRYREVLPLPPDVEPVSLGEGGTPLLRASKFADDVDLWIKDESLNP
                     TQSFKARGMSVAVSMAKHLGATKLAVPSAGNAGGALAAYAARAGVEAHIFMPRDTPRA
                     NIVECCELGAPVTLINGLITDCAAEIARRKAREEWFDMSTLKEPYRVEGKKTLGYELA
                     EQLNWQLPDVILYPAGGGTGLIGMWKAFAEMEALGWLGKERPRMFAVQATGCAPIVRA
                     FEAGEKIAAEFPDARTIASGLRVPKAIGDFLILKILRDSNGGAIAVDDEEMIRVAREV
                     GAKEGLFVCPEGAACFAALKVLRLAGKIASGERVVVFNTGSGIKYLEAYDPGLGE"
     gene            complement(2246..3136)
                     /locus_tag="VIS53_02595"
     CDS             complement(2246..3136)
                     /locus_tag="VIS53_02595"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HEY5766706.1"
                     /translation="MAFCLKLREPLPKGLKRVFCEQSDAALHMCQSPAKQRGVTVHEV
                     RKHLKKLRAAMRLAIGAVGKNCHAEEDRCVRKIGRLISDLRDAQVRWQTFIKLRDKAA
                     KNSEKQLFPRTEELLLLERESFSAAFVGWQREAIPRLENAKARLMAWPLDGLNWKQIC
                     TAVCKIYRRGQRALATTIENPEPENFHAWRKRVKDVWYQLRILQPLNRTVLEEMAQDA
                     EVLGELLGLEHDLDFLLVRLEKESGDEALVNELARLQKLIGKRCKRLRRDALELGRRF
                     YAEPSKAFAKRISIFAGKRT"
BASE COUNT          650 a          931 c          899 g          750 t
ORIGIN      
        1 gccatcgctt cgggcgtctt cggcgagacg ggcgaaccaa attccggctc gccgtgatga
       61 gcgccgatga ggtgcaacag atgcattcgc acgtcttccg atgccggcgt gagatttttc
      121 catgcgtcgg cgttttcgac gctcagcctt ctccacaacg cattcaccaa ctcgagtccg
      181 atggagatgt gtcccatcag ttcaccgagc tcgtcataac tcattacgaa tccgttttcg
      241 ggcaacgcgt tctcccagag ttttccggaa tcgtggaaga gaattcccgt gagtaacagg
      301 tcgaggttca actcagggta aagcggcgcg acctgccggg cgacgcgcat catttgcgct
      361 gtgtgctcga ccagtccgcc gcgtctggcg tgatgataat tccgcgcggc cgcggtgcgc
      421 cgaaatcggt cgccccattc gctgagaaaa gcttcagcca acgcgagcaa tcgtggatcg
      481 ctgatcccgg ccatagtttg ctttaccaat tcgaaatcgg ttgcctgttt ggcgcgtaga
      541 tctgcagggc cttggagcaa ttcgttcttt tcctgctctg tcagcggccg caccgtccac
      601 ttgcgagcat cgagtccgta ttgcgattgg taaaactccg cggtgagctc gatgaaatct
      661 tggttggtta acgcgctgca cgctttgtac gcaggatgat cgctccagac gcgcagcgtc
      721 atgcggtcgc atgcgtcggc caacgtaagc tcgcaatacg gctgctgttc gcgcgtgagc
      781 ttgggcctgg cgctttccac ttgcacgtgc acgcgtgcag acgtcgctcc attctgcgtc
      841 gcctggcgaa tttccgttag cgttagcaaa ttcatttcgt tttaatctaa catgagtcgc
      901 aagcggtgct ctctggaaga cagactgcca gtctgtctcg gccgacatgc tgccagcatg
      961 tcgaatcggc aagctggcag cttgccgtcc gagtcaggca gggctgcctg acttccgttt
     1021 cgaccccgcg cgcgtgcgtt ccccagagat gtacgctcca ttgctccaat gtttctcacg
     1081 catcttgaat gcagcgcgtg cggacgtgag cacgaatggt ctcggctcca aaatctttgt
     1141 cgctcctgca acaaaccgct atttgcaatc gtcgatcttg ccgcggccag tcgaaccttg
     1201 aaccgcgaga cactgctcgc gcgggaaaaa tcattgtggc gttatcgtga agttttgccg
     1261 ttgccacccg atgttgagcc tgtctcgtta ggtgaaggcg gtacgccatt gctgcgtgcc
     1321 tccaaattcg ccgatgacgt cgatctttgg atcaaagacg agtcgctcaa tccgacgcag
     1381 agcttcaagg cgcgtgggat gagcgtggcg gtttcgatgg caaaacatct cggcgcaacc
     1441 aagctcgcgg tccccagcgc gggcaatgcc ggtggcgcgc ttgctgccta tgcggctcga
     1501 gccggtgtgg aggcgcacat cttcatgccg cgcgacacac cgcgcgcaaa cattgtcgag
     1561 tgttgcgagc taggagctcc cgtcacgcta attaacggat tgatcactga ttgcgccgcg
     1621 gaaatcgccc gccgcaaagc aagagaagaa tggttcgaca tgtccacgct aaaagagccg
     1681 tatcgggtcg aagggaaaaa gaccctcggt tacgaattag cggagcaact gaactggcaa
     1741 ctacccgatg tgattcttta tccggccggc ggcggcactg gtctcatcgg gatgtggaaa
     1801 gcgttcgccg aaatggaggc actcggctgg ctcgggaaag aacggccgcg catgtttgcg
     1861 gtgcaagcta ccggttgcgc gccgatcgtt cgcgcgttcg aggccggaga aaaaattgcc
     1921 gcggaatttc ccgacgcgcg cacaatcgct tccgggttgc gcgttccaaa agcgattggc
     1981 gatttcctga tcctgaaaat tcttcgtgac tccaatggcg gcgcgattgc cgtcgatgac
     2041 gaagaaatga tccgcgtcgc gcgtgaggtc ggagcaaaag aaggtctctt tgtctgcccc
     2101 gaaggcgctg cttgttttgc agctttgaaa gtgcttcgtc tagctgggaa aatcgcatcc
     2161 ggtgaacgcg tcgtcgtttt taacaccgga tcgggaatca aatatcttga agcttacgac
     2221 cccggattag gcgagtgaca caatcttacg ttcgtttgcc ggcgaagatg gagatgcgtt
     2281 ttgcgaacgc tttagatggc tcggcataga aacgccgtcc gagttccagc gcatcgcggc
     2341 gcaatcgttt gcagcgttta ccgatcaatt tctggagccg cgccagttcg ttgacgagcg
     2401 cttcatcacc gctttccttt tccaagcgca caagaagaaa atccaggtcg tgctcgagac
     2461 ccaacaattc gcccagcacc tccgcatcct gagccatctc ttccagaacc gttcggttca
     2521 gtggctgcaa aattcgcagc tgataccaga catccttcac tcgcttgcgc caggcgtgaa
     2581 aattttccgg ctccggattc tcaatcgttg tggcaagtgc gcgctggccg cgcctgtaaa
     2641 tcttgcatac cgcggtgcaa atctgtttcc aattcaggcc gtccagtggc cacgccatca
     2701 gacgggcttt cgcattttcc aaccgtggta tcgcttccct ttgccagccg acgaatgctg
     2761 cagaaaaact ttcgcgttcc agcagcaata actcctccgt gcgcggaaag agttgctttt
     2821 cggaattttt cgccgcctta tcgcgcagtt taataaacgt ctgccatcgc acctgcgcat
     2881 cgcgcaagtc tgagatcaag cgtccaatct tgcgcacgca acgatcctcc tccgcgtgac
     2941 aatttttgcc gaccgcgcca atcgcaagcc gcattgcagc acgcagcttt tttagatgct
     3001 tgcggacctc gtgcacagtc acgccacgtt gtttggcggg gctttggcac atgtgaagag
     3061 ccgcgtcgct ttgctcgcaa aaaactcgct tgagtccttt cggcaggggt tcgcgcaatt
     3121 tcagacagaa agccatggcg tttgttattc aagggcgaga cgcacgttgc tgtagcgttt
     3181 agtgccggtc acttcccgtc caaaccagga aggcgctttg aatctgcggc
//
LOCUS       DATDAJ010000111         3288 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_698955, whole genome shotgun sequence.
ACCESSION   DATDAJ010000111 DATDAJ010000000
VERSION     DATDAJ010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_698955"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..1485)
                     /gene="clpX"
                     /locus_tag="VIS53_02600"
     CDS             complement(205..1485)
                     /gene="clpX"
                     /locus_tag="VIS53_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEY5766707.1"
                     /translation="MARASNLTMCSFCGKSHAEVRKLIAGPGVYICDSCINVCKSILD
                     KELNEDARRQSSNIRVPKPAQIREALDQYVIGQDTAKKTLSVAVHNHYKRVLQTPAPA
                     DTSAAFQADPLADVEIEKSNILLIGPTGSGKTLLAKTLARILDVPFCIAAATTLTEAG
                     YVGEDVENIILRLLQNADYDVKRAEIGIVYIDEIDKIGRKTDNVSITRDVSGEGVQQA
                     LLKILEGSTCNVPPQGGRKHPHQEYIQVNTEKILFICGGAFVGLDKIIQKRIGQKVMG
                     FGSPTLEVEEGLRKQSIRHVEPEDLLAFGMIPEFIGRLPVVSSLDTLTEDEMVAILTE
                     TKNAMVKQYTKLFSMEGVRLSLTKDALRALAARAVTKGTGARALRSMLERIMLDIMYD
                     VPSREDIAEVTINRAVVEGKKLPLIRKKQDKTAA"
     gene            complement(1504..2190)
                     /locus_tag="VIS53_02605"
     CDS             complement(1504..2190)
                     /locus_tag="VIS53_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEY5766708.1"
                     /translation="MTVSNENVSQVLVPMVVEQTGRGERSYDIYSRLLKDRIVFVGQV
                     DDHIANLVIAQLLFLQMEDGKKDINLYVNSPGGVVTAGLAIYDTMQFMTCDVVTYCIG
                     MAASMGAVLLCAGTKGKRFALPNSDIMIHQVHGGAQGQASDVERQVDYMFKLKKRIIR
                     IISQHTGKSEEQVRLDSDRDYYMSADEAKAYGLVDEVIKSRKEIKLDGSTPPDGRLVE
                     MPEAVLSRKG"
     gene            complement(2187..>3288)
                     /gene="tig"
                     /locus_tag="VIS53_02610"
     CDS             complement(2187..>3288)
                     /gene="tig"
                     /locus_tag="VIS53_02610"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEY5766709.1"
                     /translation="EQEQLRVASLTNIEDIEFGEDKSMRFRATVVTAPEFELPDYKEI
                     PVQLPDTKISEAEVEAAIERLRDQSADFVDVPERALEMGDFAVLDFEGSIENKAISEI
                     APQASKNLHGGKKFWLHLAPENFLPKFSEQLIGLKPGEPRLVIVDFPNDFPVKEVAGK
                     KADYAVTLREIKEKVLPPIDDALAAKLVPGKTLVALREMIEHDLEHAKEHDSERAKEA
                     QILKYLHERIQVELPPALLQNETRRALAELVQRNRERGVTDDMLKDKEKELIDAAAEM
                     AAHRLKTNFILHRIAEREKTQVTKEDLDSRIRQEAARYDISPDKMRKELQQRNALDDL
                     AEQLLLGKTLDFLKANVSIELTKELSVKEENS"
BASE COUNT          659 a          932 c          835 g          862 t
ORIGIN      
        1 attcgtagac ccaacggaag gatctcgcgc gctataaacg caagatgcgc gtcctgaacg
       61 tcaccgagca aaagttcggt accagtgttg atgaggatcg cgcgcatttt gggaaggaat
      121 cagttaaaac gttacaaagg cagactggca ccgtttaact ttgtaactct tttaaccttt
      181 caaccagccc ggacgctttc gggcttacgc cgctgtcttg tcctgtttct tgcgaatcag
      241 gggaagcttt ttgccttcta ctaccgcacg attgattgtt acttcggcga tatcttcgcg
      301 gctcggcacg tcgtacatga tgtcgagcat aatgcgttcg agcatcgaac gcagcgcacg
      361 tgcgccggtg cctttggtga cagcccgcgc ggcaagggcg cgcaacgcat ctttggtcag
      421 cgacagacga actccctcca ttgagaagag cttcgtgtac tgctttacca tggcgttttt
      481 tgtttcggtc aaaatcgcta ccatttcatc ttcggtgagc gtgtcgagcg aactaacaac
      541 ggggaggcgc cctatgaatt cgggtatcat cccaaacgcg agcaaatctt ccggttccac
      601 gtggcggatc gattgtttac gcagcccttc ctcgacctcg agcgtcgggc tgccaaagcc
      661 cataactttt tggccaatcc gcttttggat gatcttgtcg agcccaacaa atgcgccacc
      721 acaaatgaaa agaatctttt cggtgttgac ctgaatgtat tcctggtgcg gatgtttgcg
      781 cccgccttgc ggtggaacat tacacgtgct gccttccaaa attttcagca aagcctgctg
      841 cacgccttcg ccggagacat cgcgcgtgat gctcacgttg tccgtcttgc gtccaatttt
      901 gtcgatctcg tctatgtaaa caatcccgat ctcagcgcgc ttcacatcgt aatcggcatt
      961 ctggagcaat cgtaaaatga tgttttcgac gtcttcgccg acgtatccgg cttcggtcag
     1021 cgtcgtcgcg gcggcgatgc agaacggtac gtcgagaatt ctggccagcg tcttggctag
     1081 caacgttttc ccggagcctg tggggccgat aagcagaatg ttgcttttct cgatctcaac
     1141 gtccgccagt ggatcggcct gaaacgcagc tgaagtgtcc gcgggcgcag gagtctgcag
     1201 cacccgcttg taatgattgt ggaccgccac agaaagtgtc ttcttggcgg tgtcctgtcc
     1261 gatcacatat tgatcaagag cttcccgaat ttgtgccggc tttggcaccc gaatattcga
     1321 agactgacga cgagcgtctt cgttgagctc cttatcgaga atgcttttgc aaacgttgat
     1381 gcagctgtcg caaatgtaaa cacccgggcc tgcgatgagc ttgcgcacct cagcgtggct
     1441 tttgccacag aaggagcaca tggtgaggtt cgaagcgcgc gccatatgct ctggatttcc
     1501 gcgtcaccct ttccgcgaca atactgcttc gggcatttcc accagccggc catccggagg
     1561 cgtgctgccg tctaatttta tttccttccg cgacttgatc acttcgtcca ccaacccgta
     1621 tgccttagct tcgtccgcag acatatagta atcccgatcg gaatcgagtc ggacttgctc
     1681 ttctgatttg ccggtgtgct gtgagatgat gcgaataatg cgctttttga gcttgaacat
     1741 gtaatcaacc tggcgttcca catcgcttgc ctgaccctgc gcgccgccgt gcacctggtg
     1801 aatcatgatg tccgagttcg gcaatgcaaa gcgtttgcct ttcgtgccgg cacagagcaa
     1861 caccgccccc atgctcgctg ccatgccgat gcaatacgtc accacgtcgc acgtcataaa
     1921 ctgcatcgtg tcgtaaattg ccagtccggc cgtgacgacg ccgccgggtg aattgacgta
     1981 aagattgatg tcctttttgc catcttccat ttgcaggaag agcaattgcg cgatcaccag
     2041 gttcgcgatg tgatcgtcga cctgaccgac aaaaacaatg cggtccttca gcagccgcga
     2101 gtaaatgtcg tagctgcgtt cgccccgacc agtctgctcc acgaccatcg gcaccagcac
     2161 ttgcgagaca ttttcgttag atacggtcat gagttttctt ctttgacgct gagttctttt
     2221 gttaattcga tgctaacatt cgccttcagg aaatcaaggg tcttgcccag cagaagctgc
     2281 tcagcgaggt cgtccagcgc gttgcgttgc tgcaattcct tgcgcatttt gtcaggcgaa
     2341 atgtcgtagc gcgcagcctc ctgtctgatg cgcgaatcga gatcttcttt tgtgacctga
     2401 gtcttttcgc gctcggcgat gcgatgcagg atgaagtttg tcttcagccg gtgcgccgcc
     2461 atttccgctg cggcatctat caattccttt tctttatcct tcagcatgtc gtcggtcaca
     2521 ccgcgctctc gattccgttg aactaattcg gccagcgctc ggcgggtttc attttgcaga
     2581 agcgctggag gcagctctac ctgaattcgt tcgtgcaaat atttgagaat ctgtgcttcc
     2641 ttcgcccgtt ccgaatcatg ctctttggcg tgttcgaggt cgtgctcgat catttcgcga
     2701 agagcaacca gcgttttgcc ggggacgagc ttggccgcga gcgcatcgtc gatcggtggc
     2761 agcaccttct ccttgatctc gcgcaacgta acagcgtaat ccgctttttt cccggccact
     2821 tcttttaccg gaaaatcatt tggaaaatcg acgatcacta gccgcggctc gccgggtttt
     2881 agtccgatta gttgctcgct aaatttcggc agaaaatttt cgggcgccag atgcagccag
     2941 aatttcttgc cgccgtgcag attcttgctg gcttgcggcg cgatttcgct gatcgccttg
     3001 ttttctatcg aaccctcgaa atcaagcacc gcgaaatcgc ccatttccaa cgcgcgctcc
     3061 ggcacatcta caaagtcggc ggattgatct cgcaaacgct cgatcgccgc ttcgacttct
     3121 gcttccgaaa tcttggtgtc cggcaattgc accggaatct ccttgtaatc tggaagctcg
     3181 aattccggcg cggtgaccac agtcgctcgg aagcgcatcg acttgtcctc cccaaactca
     3241 atgtcttcaa tgttcgtcag cgaagccacg cgcaattgct cttgttcg
//
LOCUS       DATDAJ010000112         3546 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_722810, whole genome shotgun sequence.
ACCESSION   DATDAJ010000112 DATDAJ010000000
VERSION     DATDAJ010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_722810"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="VIS53_02615"
     CDS             <1..358
                     /locus_tag="VIS53_02615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766710.1"
                     /translation="GKLWQAVLAKIPAQKGFVRNSASAAHVLGIDGRNFKLGFAAADK
                     AAMDILGTQANRKFVETLLHEISEKDWTLKLTVSEELASRSAVVKKDSPSSDFKDEPL
                     IQDAIELFNARVTQER"
     gene            392..709
                     /locus_tag="VIS53_02620"
     CDS             392..709
                     /locus_tag="VIS53_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEY5766711.1"
                     /translation="MNLNKLMKQAQKMQEQMAKTQAELEQKTVEVSAAGGKVKVTANG
                     SGDIIAIKIDKEVVDPNDVEFLEEMVLSAVKQAIEQGKALAQSEMTKITGGLGGMGLP
                     GLQ"
     gene            complement(807..2075)
                     /gene="serS"
                     /locus_tag="VIS53_02625"
     CDS             complement(807..2075)
                     /gene="serS"
                     /locus_tag="VIS53_02625"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEY5766712.1"
                     /translation="MLDIRLIREKPDFVRERLATRCGGDEAKIDDVMRIDAERRKSET
                     ELQRLQSDRNRLSKEIGTRRSRKEPSEELEAEVRKIGQQIADLTQRANALDEEQRNLL
                     LDIPNLPHASVPIGKDPSANRVVRNWGEKPQLTNAADHVALGTRLNLFNLEWAAKLSG
                     SGFICFTGAGAKLERALINFMIDLHTREHGYFEVSPPFVVRRDCMIGTSQLPKFEADM
                     YGLEENQLFLAPTAEVPLTNLHREEILSVGDLPKKFTAYTPCFRREAGSAGRDTRGII
                     RVHQFDKVEMVKIVAPEKSYKELESLTADAEQVLQLLGLHYRVIELCTGDLGFGSAKT
                     YDIEVWSPGQNAFLEVSSCSNFEDFQARRMQLRFKDRDGKNRLCHTLNGSGLALPRLF
                     AALIENYQQPDGSVRIPEKLQSFFGAEKIK"
     gene            2318..2947
                     /locus_tag="VIS53_02630"
     CDS             2318..2947
                     /locus_tag="VIS53_02630"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEY5766713.1"
                     /translation="MERLDLLSVALGLAALAGVNLYLTVFATGLAIHFHWITLAPQYQ
                     SLEILGNPWIISIAGALYLLEFFADKIPWVDSIWDAVHTVIRPIGGALLAIQVLGHPS
                     PALTVIVALLAGGTSLLAHTAKAATRLASNTSPEPLSNIGLSLGEDAAVLGGLTLVHF
                     SPLLALIIFLIAIGVFFYFARRILRSIKGKIGGTRKKLDEPADRNVSVQ"
     gene            3057..3419
                     /locus_tag="VIS53_02635"
     CDS             3057..3419
                     /locus_tag="VIS53_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766714.1"
                     /translation="MKHLLILFLVLIATPICHATSNIVVSGGGYDISVLLSLLGSEDC
                     KVVGLNVSGDNGSIISIETNDLAAFSKAESDCKKKTIHLVVPATKSHPYFELKSTRKR
                     GQLTLGETKVKVSPDWQM"
BASE COUNT          810 a          939 c          945 g          852 t
ORIGIN      
        1 cggaaagctt tggcaagccg ttctcgcgaa gattccagca cagaagggct tcgtgcgaaa
       61 ctcagcttca gcagcccacg ttcttggaat cgacgggcgc aattttaaac tcggtttcgc
      121 ggctgccgac aaggccgcaa tggacatcct gggcacacag gccaatcgca agttcgtgga
      181 gacgctgctg catgaaatca gcgagaaaga ttggactttg aagctgaccg tgagcgaaga
      241 actcgcttcc aggagcgccg tcgtcaaaaa agattcgcct tctagtgatt tcaaagacga
      301 accattaatt caggacgcta tcgagctatt caacgcccgg gtcactcaag aaaggtaggg
      361 cgactgccgg gcgcgccgca ccaaggagct tatgaatcta aacaaactga tgaagcaggc
      421 gcagaagatg caggagcaaa tggccaaaac tcaggccgag ctcgagcaga aaaccgtgga
      481 agtgagcgcg gccggcggga aagtgaaagt gacggcgaac ggctcgggcg acattatcgc
      541 gatcaagatc gacaaggagg ttgtcgatcc gaatgacgtc gaattccttg aggaaatggt
      601 gctaagcgcg gtgaaacaag cgatcgagca aggcaaggcg ctggcgcaat ccgagatgac
      661 gaaaatcacc ggcggccttg gcggcatggg attacccggg ttgcagtaat ggcgaataac
      721 tttagcccga attgtagggc gtctgtgtca gacgccgatt ccttacgccg gcgtttcaca
      781 gaaacgccct acaataattg tattgattac ttgatcttct cggcgccgaa gaaggactgt
      841 aacttttccg gaatgcgtac cgagccatcc ggctgctgat aattctcaat caacgcagca
      901 aacaatcttg gcaacgccag gcctgaacca ttcaacgtgt ggcacaagcg gttctttcca
      961 tcacgatctt tgaaccgcag ttgcatccgg cgcgcctgga aatcttcaaa gttcgagcaa
     1021 ctcgagacct ctagaaatgc attctggcct ggcgaccaga cttcgatgtc gtacgtcttg
     1081 gctgagccga accctaaatc gcctgtgcaa agctcgatga cccggtaatg caacccgagc
     1141 agttgcaaca cttgttctgc atctgcagtg agcgattcaa gttctttgta agatttttcc
     1201 ggggcgacga ttttcaccat ttcgacttta tcgaattgat gcacgcgaat gatgccacgt
     1261 gtgtcgcgcc cggcggaacc cgcttcgcgc cggaaacagg gcgtataagc ggtgaatttt
     1321 ttcggaagat cgccaacgct caggatctct tcgcgatgga gatttgttaa tggaacctct
     1381 gccgtcggcg cgaggaaaag ctggttctct tccaagccgt acatgtcggc ctcaaatttc
     1441 ggaagctgcg atgtgccgat catgcagtca cgccgaacta caaacggcgg acttacttca
     1501 aaatacccat gctcgcgcgt gtgcagatcg atcatgaaat tgatcaatgc gcgctcgagc
     1561 ttcgcgcctg cgccggtaaa acaaatgaaa ccgcttccgc tcagtttcgc cgcccattcg
     1621 agattgaaga gatttagtct cgtgccgagc gcaacgtgat cggcagcatt ggttaattgc
     1681 ggcttctcgc cccagttacg gacgacccga tttgcgctgg gatccttgcc aatgggaacg
     1741 ctcgcatgcg gaagatttgg aatatccaag agtaagttgc gctgctcttc atcgagcgca
     1801 ttggcgcgct gtgttaaatc ggcgatttgc tgaccgatct ttcgcacttc ggcttcaagt
     1861 tcttcgctcg gttccttacg cgaacgtcgc gtgccgatct ccttgctcag acggttgcgg
     1921 tccgactgta gccgttgcag ctcagtttcg cttttgcgcc tctcagcgtc gattcgcatt
     1981 acgtcgtcga tctttgcttc atctccgccg cagcgtgtcg ccaggcgctc acggacaaaa
     2041 tccggtttct cgcgaatcag acggatgtcg agcatggcgc cagtatgaat gacgaattcc
     2101 gaatgtctaa tgaccaacaa atgttgtagc gtccgctgtc ctcagcggat aaacgagccg
     2161 cgaaacgttg accacatgca gcaaaatgcg ctggggacag cgcagtctat ggcatccggc
     2221 cttcgttctt ccttcgtcat tggtcattcg tgcttcgtca tcgcacctta gccaagctcg
     2281 cgcgtgactt tgagtggttc gcacccgatg cttgcgcgtg gaaagattgg atctcctcag
     2341 cgtcgcgctc ggtctggccg cgctcgccgg cgtcaatctt tacctgaccg tttttgccac
     2401 tggcctcgca atccattttc actggatcac tctggcaccg cagtatcagt cgctcgaaat
     2461 cctcggcaac ccatggatca tcagcattgc cggtgctctc tatttgctcg aatttttcgc
     2521 cgataaaatt ccatgggtgg attcaatctg ggacgccgtc cacaccgtga ttcgtccgat
     2581 cggcggcgct ttgcttgcga ttcaagtgct tggtcatccc agtccagcat taacggtcat
     2641 cgtcgcgttg ttggcgggag gcacgagcct ccttgcgcac acggcgaaag cagcgacgcg
     2701 gctcgccagc aatacatcgc cggaaccgct ttcaaacatc gggctcagtc ttggtgaaga
     2761 cgctgctgtg ctgggtggcc taactctcgt gcatttcagt cccctgctcg ccttgatcat
     2821 ctttctgatc gccatcggcg ttttcttcta ttttgcgcga agaattttgc gttcgattaa
     2881 aggtaagatc gggggcaccc ggaagaaatt ggacgaaccg gcagatcgta acgtgtcggt
     2941 acaatgacag ctgaggttct aaccgatcta ttcaagccaa tggctgtcat cgaagtattt
     3001 taaatgattg ccacgaaagc ctgccctggc ttatctcctt ctcgttaagt aaccctatga
     3061 aacacttgct tatcctattt ttagtgctga tcgctacacc gatctgccat gctacatcca
     3121 atatagtcgt cagtggcggt gggtacgata tatcggtctt gttgagcttg ttggggagtg
     3181 aagattgcaa ggtcgttggc ttaaacgtca gcggcgacaa tggaagcatt atctctatcg
     3241 aaaccaacga tcttgcggcg ttcagtaagg ctgagtccga ctgcaaaaag aagacaatcc
     3301 atctcgtggt gcccgcaacg aaatctcatc cttatttcga attgaaaagc actcgcaaga
     3361 ggggccagct gactcttggg gaaacaaaag tgaaggtatc acctgattgg cagatgtagg
     3421 ccgtaagcga gttgcaaaag cggctgagcc cgatctcgag ttagaactga ttatgccttg
     3481 gcttcttagg tttgcgatcg gctcgttttt cgtatttgtc atcggcgcgg tgatgattgc
     3541 gtgggc
//
LOCUS       DATDAJ010000113         3002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_731260, whole genome shotgun sequence.
ACCESSION   DATDAJ010000113 DATDAJ010000000
VERSION     DATDAJ010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_731260"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(280..1869)
                     /locus_tag="VIS53_02640"
     CDS             complement(280..1869)
                     /locus_tag="VIS53_02640"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HEY5766715.1"
                     /translation="MRLAGRAGLLGALPTLASAAAALEQDTVCVSILHTTDLHGHILP
                     TSDYDGTADRGGLARCVTQIRRWRRQNPNSILVDVGDVYQGTEVSLRNKGELMIDLFN
                     YLKYDAWVIGNHEFDWGMEPFTNALQKSAMPVLGANTTLDGKAAGSSSDSQHPFGKVQ
                     PFIVKEIEGIKVAIIGITTPGMSFWLPREFTVGIDFQFPVEAVRRAIAKANSEGADAI
                     VLTGHMGLKPRTGGDDFANTVMALTSEFPDVAAFIAGHTHQPIPSRLTNRVLFTQADH
                     FGIHVGRVDLLFDRNSKKLLRREAICELMDSRFDPDPVVLSRAGSQLAESEASLAQSI
                     GELTETLHARGQRGHPSEIEKLIGAAITETLAERNIIVDAVMHGVFDENARLASGLTT
                     VSDIWNVIPYENLIVTATLSPDEIRSVMEEVYASREPRSLLGIALRVEGRGLDRRITS
                     MAFPDGRQLERDKRYKIAVNSFDARSGGHHFMQLRALLAKPESNCVLHAVQTRDAVID
                     YFRRHKIVQRIGALTPLGVAA"
     gene            2117..>3002
                     /locus_tag="VIS53_02645"
     CDS             2117..>3002
                     /locus_tag="VIS53_02645"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY5766716.1"
                     /translation="MLNEDSITELKRSLRGRLIQPGDADFDEARKVYNAMIHKKPRLI
                     ARCSDVADVIRCVNFGRDNDLLVSIRGGGHNAGGLGICDDGLVIDLASIKYTRVDPAA
                     RTVTAGGGCVWGDVDHATHAFGFATPSGIISTTGVGGLTLGGGVGHLTRKCGLSIDNL
                     LSADVVLANGEFVKASADENPDLFWALRGGGGNFGVVTSFTFKLHPIDTVYAGPMLYE
                     LSETADVMKWYRDLIPTAPDDLNGFFAFLTVPPAPSFPEHLHMKKMCGVVWAYTGPQE
                     KAEETFAPIRAFKRPALDF"
BASE COUNT          678 a          831 c          816 g          677 t
ORIGIN      
        1 acaagacaag aaaacattac cgcggcttcc ttttgtccct tcttgatcag gtcggcagtg
       61 tctatcgtgt tgatcaggga atttggcgcg gttccgatca acgctggccg aaactctggc
      121 aacgttgccc gcggtgacgg tgatggtgat ccgggttttg gcgtctgcgc tgaggcaaga
      181 tcagcgctca acaataaacc gacaaagcaa aaaatccgaa gtcgcatggc gaaataggca
      241 agcgaaagcg gttctttttg caagggcgaa ctggtgaaat catgccgcga cccccagcgg
      301 cgttagcgcg ccaatccttt gcacaatttt atgccgccgg aaataatcga tgaccgcgtc
      361 gcgtgtttgc acggcgtgca gaacgcaatt tgactctggc ttggcaagca acgctcgcaa
      421 ttgcatgaaa tgatggccgc cgcttcgcgc gtcgaaacta ttgactgcga ttttgtatct
      481 cttatcgcgc tccagctggc gtccatctgg aaatgccatt gaggtgatcc ttcgatccag
      541 accgcgaccc tccactctta gtgcgatacc cagcaaactt cgtggctcac ggctggcata
      601 tacttcttcc atcacgcttc ttatttcatc aggagaaagc gtcgcggtaa cgatgaggtt
      661 ttcgtacgga atgacattcc aaatgtcgct aaccgtcgtt aggcccgagg caagtctagc
      721 gttttcatcg aaaacgccat gcataacggc atcgacgata atgtttcgtt ccgccaatgt
      781 ttctgtaatc gcggcgccga tcagcttctc gatttcactc gggtgaccac gctggccgcg
      841 agcatgcaac gtttcggtca actcgccgat cgactgggca agcgaggctt cggattccgc
      901 aagctgcgat cctgctctag aaaggacaac tggatccgga tcgaaacggc tgtccatcag
      961 ctcacagatc gcttcacgac gtagcaattt cttcgaattt cgatcaaaca acagatctac
     1021 gcggcccaca tgaattccga aatggtccgc ttgcgtgaaa agcacgcgat tcgttagacg
     1081 acttggaatt ggctgatgag tgtggcccgc tataaaagct gcgacgtccg ggaactcgga
     1141 agttaacgcc attactgtgt tcgcaaagtc atcgccgccc gtgcgcggct tcagtcccat
     1201 gtgacctgtg agcacaatcg cgtccgcgcc ttcgctgttc gctttcgcaa ttgcgcgtcg
     1261 tacagcctca acgggaaatt gaaaatcgat tccaacggta aactcccgcg gaagccagaa
     1321 cgacatgccc ggcgttgtga ttccgataat tgcgactttg atgccctcaa tttccttgac
     1381 gatgaatggc tgaaccttgc cgaacggatg ttgcgaatcg gaagatgagc cggccgcttt
     1441 tccgtctaac gttgtgtttg cacccagcac cggcattgcg gatttttgta gcgcattagt
     1501 aaacggctcc attccccaat cgaattcgtg attgccaatc acccaggcgt cgtatttgag
     1561 gtaattaaaa agatcgatca tcagttcgcc cttgtttcgt aggctcacct ctgtgccttg
     1621 atagacgtcg ccgacatcga ccaggatcga gttcggattt tgccgccgcc atcggcgaat
     1681 ttgcgtgacg caacgcgcca aaccgccgcg atcagcagtt ccgtcgtaat cagatgtcgg
     1741 caaaatatgg ccatgcaaat ccgtggtgtg caggatcgag acgcagactg tgtcttgctc
     1801 aagcgcggca gcggcacttg ccagcgtggg aagggcgccg agcaatcccg cgcgaccggc
     1861 gagtctcaaa aaatcgcgcc gcgtccatga tctatatggg tgagacattg cgtggtggcc
     1921 tctggcgaga ggctaaccgt aaatgaatct gagtttcaat ggaaaaaggc acgccgacgc
     1981 agcccaagga gcggcgcctt gcctgcccgc cgtagcctca gcgaaggcgg gggcagccgc
     2041 cgaaatctaa aatcgacggc cgtcgttcct tgatcgtttg gtaacacagg gtaactgtgt
     2101 cgaaaattct cttcccatgc tcaacgaaga ttccattacc gaactaaaac gaagcctcag
     2161 aggcagactc atccagccgg gcgacgcaga tttcgatgaa gctcgcaagg tctacaacgc
     2221 aatgatccat aagaaaccgc gcttgatcgc gcggtgctcg gatgtcgcag acgtcatccg
     2281 gtgcgtaaat ttcggacgcg acaacgatct cctcgtttca atccgtggtg gcggtcacaa
     2341 cgccggcggc ttgggaattt gtgatgacgg cctcgtgatt gatctcgcgt cgatcaaata
     2401 cacgcgagtc gatcctgcgg ctcgcactgt cacagccggc ggcggatgcg tctggggcga
     2461 cgttgatcat gccacgcacg cgtttggatt cgcgacgccg agcggcatta tttccacgac
     2521 tggcgtcggc ggattaacct tgggcggcgg agtcggtcat ctcacccgga aatgtggcct
     2581 aagcatcgat aatttgctgt cggccgacgt tgtcctggca aatggcgaat tcgtaaaagc
     2641 gagtgccgac gaaaatcccg atctgttctg ggcgctccgc ggcggtggcg gcaattttgg
     2701 cgtcgtcacg tcgttcacgt tcaagctgca tccgatcgac acggtctatg ccggccccat
     2761 gctttacgag ctcagcgaga cagccgacgt gatgaagtgg tatcgcgatc tgatcccgac
     2821 ggcgccggat gatctgaatg gcttcttcgc ttttcttacg gtcccgccag ctccatcgtt
     2881 tcccgaacat ctgcacatga aaaaaatgtg cggagtggtc tgggcataca cgggaccaca
     2941 agagaaagca gaagaaacat tcgcgccgat ccgggcattc aaaagacctg cgctggattt
     3001 cg
//
LOCUS       DATDAJ010000114         8480 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_735122, whole genome shotgun sequence.
ACCESSION   DATDAJ010000114 DATDAJ010000000
VERSION     DATDAJ010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8480
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_735122"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="VIS53_02650"
     CDS             <1..601
                     /locus_tag="VIS53_02650"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY5766717.1"
                     /translation="IWRPFLIALGIGALIFGGFKARAFVICLGISLAIAGLVTSALKS
                     SVARHRPKHVESVRMVQLQKAQPKFFTLFKKPIIRFSDSSDRVRSGPSFPSGHAVNNT
                     IAATYFTLFYRRRGWLYWFVALAVGYSRIYLGAHWPSDVVATLFLGIGEALLLLSFFE
                     LIWRIAARKWMPNVFARHPSLLGDFNGRARSPGAPQRST"
     gene            598..2181
                     /locus_tag="VIS53_02655"
     CDS             598..2181
                     /locus_tag="VIS53_02655"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5766718.1"
                     /translation="MNTTRAVWLFVAALTAIRFSLLATTDLSFDEAHYWMWSERLAPA
                     YFSKGPGIAFAIRASTAVFGANEFGVRFFSPLLAAATSLLLFYFARRLFGATAGLWAV
                     IALNATPIFNIGAIVMTIDALSIFFWMAAMFTFWLAVENPERFRGSWYWPLTGLLIGL
                     GFLCKYTNAFELISVFLVLALVPRLRREFKRSGVYLLIGMFVLCTIPPIVWNAQHAWI
                     TLAHLRSRGNLDRGFGFHPAEVLSFLGQHFIVYSPLLFLALAWGVIASWRRINQQFKV
                     LFLMWFGLPVFGFYLLLSLNKSAAPNWDALAFFGFGLVATYFWWHRLQANVLLRTCAS
                     VAVLVGLIMSVVALDTDLLRVAGYQFPRSDPSDRMRGWKSATEALEKMRNNLEAQLGE
                     KLFLIADARDRASEISFYLRDKRVEGPGHPPVYIPESQDMVNQFSFWPRYDQFVELKP
                     GMQLPEGEVYTEENGINLFVGRDALFIRAGEKGRVPRNIQAAFQSTELVGTIEVSRYG
                     KVMRIWQMFLCRSYRTLPL"
     gene            2342..3055
                     /locus_tag="VIS53_02660"
     CDS             2342..3055
                     /locus_tag="VIS53_02660"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5766719.1"
                     /translation="MTHTTNSPAVSVIVPVYNEEESVPILQAELRAALRAIDHEFIFV
                     DDGSADHTVERIEAAPNLRVIRFEKNAGQSAALYAGLQAARGAILVPIDGDLQNDPAD
                     IPKLIGEISRGADLVCGYRALRRDTLVKRLTSRIANTVRSRYTKDGVRDTGCTLKAMR
                     RECVTALFPFRGMHRFIPALIKDAGYRLVEIPVNHRPRRFGQTKYGLGNRAVRATTDM
                     FGVRWLLSRRLIYKIREEN"
     gene            3134..3592
                     /locus_tag="VIS53_02665"
     CDS             3134..3592
                     /locus_tag="VIS53_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEY5766720.1"
                     /translation="MSLANLLSAEQIIPEMKATERWSAIVELIDLLVSLGKIKSADRD
                     PILAALKQREETMSTGIGFGIAIPHCSSDRLDEVVAAFGRSTKGIEFDALDNAPVKFV
                     VLFIVPKNQFQTHLRTLASIAKFLNDRSVRESLASAKSADEILAIFRERS"
     gene            3664..5457
                     /gene="argS"
                     /locus_tag="VIS53_02670"
     CDS             3664..5457
                     /gene="argS"
                     /locus_tag="VIS53_02670"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEY5766721.1"
                     /translation="MDTFQSLLAKKLSDALASAGLPAAGELTLATDPRFGDYQTNVAL
                     VLGKQRGENPRALAEKIIARLDVSDVSEPPAVAGAGFINFTLRQAAVEKQTLDILRDE
                     RLGVAETESPRRIVIDFGSPNVAKPMHVGHIRSTALGDALARVAKFLGHEVIRDNHVG
                     DWGTQFGMVIWGWKNLLDRQALQRNPLAEIVRIYKETNDRASKNPEVREACRQELVKL
                     QASDKENTDIWNECVAFSMQDFEHVYRLLDVHYDLQCGESFYNDRLPGIVDRLLKAGI
                     AAMSEGAVVVFFHDDPELADKPLIIRKRDGGFNYATTDVATIDYRVNELKADAIWYVV
                     GAPQTLHFKQIFAVARREGYTTDLRHIIFGNVLGEDRKLMKTRSGENVPLRELLEEAC
                     RRARKIIDEKNPDLSEEEKNDIAEKIGISAVKYADLSQYRTTDYVFSWDKMLSLHGNT
                     APYLQNAYVRIRSIFRKAAEAAVATPLWGVEAAQQGESGHPPSPGYGEASRPVATGFT
                     FAEPAERDLAKRLCQFAEIVPQVLNGFRPNILANYLFELANSFHAFYEACPVLKSEES
                     ARSSRLALCDLTARVLQCGLDLLGIKVPERM"
     gene            5560..8415
                     /gene="treY"
                     /locus_tag="VIS53_02675"
     CDS             5560..8415
                     /gene="treY"
                     /locus_tag="VIS53_02675"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEY5766722.1"
                     /translation="MKKEHPRIPTCTYRLQFNRWFTFAQAREIVAYLDALGVSDVYAS
                     PYFQASPDSLHGYDIADHNKLNAAIGSRADFDAWVEQLQAHGMGQVLDFVPNHVGIAN
                     SRNEWWMDVLENGPSSEYAPYFDIDWEPLKSDLRDKVLLPILGDQYGRVLERGELQVG
                     FEEGTFYLFYSDRRLPIAPSTYRYVLQIALQNLAEYKDEDLYAELQSILTALEYLPKR
                     TETDPKRIAERVREKEIIKRRLERRCAEAPEVQHAIEKALVQINGKPEDPRSFDVLDR
                     LLNEQAYRLAFWRVAAEEINYRRFFDVNELAAIRVELPKVFDAVHRLILELVSAGAVT
                     GLRIDHPDGLYLPREYFEKLQQRCAKALGIALPKDGRAIYMLAEKILTGSERLRADWC
                     VHGTTGYDFANHVMQLLVDPAAETAITKTFHRFIDHSVPFGHLLYAKKLLVMKLALAN
                     DVDVLSNMVDRLSEQNRWYRDFTLEALSRTVRETIACFPVYRTYIEPGQPVSEEDRQI
                     VEHAIAAAKRRNPAMEESIFNFLRDVLLFRFPPNLDAAGRAAHTHLVLKFQQTTGPVM
                     AKGLEDTVFYIYNRLTALNEVGGDPEQFGLSVDAFHERNLDRQRNWPAGLTATSTHDT
                     KRSEDVRARIVAISEIPELWRGSLQRWHTANRRWKQMVNDLEAPDANEEYLLYQTLLG
                     TWPMQANGEPEPVPTADYIERIQAYMTKALKEAKINTSWIQPNEEWDAAMHNFVARIL
                     DSSARNKFLPVFLPAAKEMNRLGAINSLTQTLLKLTSPGVPDIYQGTEIWDYSLVDPD
                     NRRPVDYGLRRQMLKLLSTATPGELMQTWPDGRIKLFLTKHLLQLRRGHADLFERGEY
                     LPLHASGTFAECCVSFVRRLDDDWIAVIAPRLSSRIGFPPIGEAWQDTAIRLPETFSL
                     EDAHDLFTCQAIRHHKRQVGVRDVLSALPFAVITNLR"
BASE COUNT         1827 a         2240 c         2446 g         1967 t
ORIGIN      
        1 gatttggagg ccgttcctta tcgcacttgg aattggtgcg ctgatcttcg gcggattcaa
       61 agcacgcgcg ttcgttatct gtctgggcat atctttggca atcgcgggac tggtcacaag
      121 tgcattaaaa tctagcgtgg cccgtcaccg accaaaacac gtcgagagtg ttcggatggt
      181 ccagttacaa aaagcccagc caaagttttt taccctcttt aagaagccga tcattcggtt
      241 ttctgattcc tcggatcgcg tccgctcggg accgtcgttc ccgtctgggc acgctgtaaa
      301 caacaccatc gccgcgacgt attttacttt gttttaccgg cggcgcggct ggctgtactg
      361 gtttgtcgct ctggccgttg gatattcgcg aatttacctg ggcgcgcatt ggcccagcga
      421 cgtggtggcg acgctctttc tcgggattgg tgaagcattg cttctgctca gcttctttga
      481 gttgatttgg agaatcgcgg cgcggaaatg gatgccaaat gtgtttgcgc gccatccgag
      541 tttgcttggt gatttcaacg gtagggcgcg atcgccgggc gcgccgcaac gctcaacatg
      601 aacaccacgc gcgcagtctg gctctttgtc gctgcactga cggcgattcg tttttcactt
      661 ctggcaacga cagatctctc ctttgacgaa gcgcattact ggatgtggtc ggagcgactg
      721 gcgcccgcct acttcagcaa gggacctggt atcgccttcg ccatacgcgc gagcaccgct
      781 gtttttggcg cgaacgagtt tggtgttcgc ttcttcagtc ctttgctcgc ggcggccacc
      841 agtctgctcc tgttctattt tgcgcgccgt ttgttcggcg ccaccgctgg tctgtgggca
      901 gttattgcct tgaatgcaac gccgattttc aacattggcg cgatcgtaat gacgatcgat
      961 gcgctatcga ttttcttctg gatggcggcg atgtttactt tctggctcgc ggtggaaaac
     1021 cccgaacgct ttcggggctc gtggtactgg ccgcttacag gtctgctgat cgggctggga
     1081 tttctctgca agtacacgaa cgcgttcgaa ttaatttcgg tgttcctcgt gctcgcgctc
     1141 gtgccacggc tacgacggga attcaaacgc tccggcgtgt atttgctgat cgggatgttc
     1201 gttctttgca cgattccgcc gattgtctgg aacgcgcagc acgcctggat cacgctggcg
     1261 catttgcgct cgcgtggaaa tcttgaccgc ggctttggct ttcatccggc tgaggtgctc
     1321 tcatttctcg gtcaacactt catcgtctat tcgccgctgc tgtttctggc gttggcctgg
     1381 ggtgtgatcg caagctggcg gcgcatcaat cagcaattca aagtcctgtt cttaatgtgg
     1441 tttggtttgc cggtgtttgg tttttacttg cttctgtcgc ttaacaaaag cgcggcgccg
     1501 aattgggatg cgctcgcctt ttttgggttc ggattggtcg cgacgtattt ctggtggcac
     1561 cggcttcagg cgaacgttct tttacggaca tgtgccagcg ttgccgtcct ggtgggattg
     1621 atcatgagcg ttgtcgcatt ggacacagat ttgctgcggg tggccggtta ccaatttccg
     1681 cgaagcgatc cgagtgatcg gatgcgtgga tggaaaagcg cgacggaggc gctggagaaa
     1741 atgcgcaaca atcttgaggc gcaattgggc gagaaactct ttctcattgc tgacgctcgc
     1801 gatcgcgcgt cggagatttc gttttatctg cgcgacaaac gagtggaagg cccgggtcat
     1861 ccgcccgttt acattcccga atcgcaggac atggtgaatc agttttcctt ttggccgcgc
     1921 tacgatcagt tcgtggagct aaaacctggc atgcaattgc cggagggcga ggtttacacc
     1981 gaagagaacg gcatcaattt gtttgtcgga cgcgatgcgc tttttatcag ggctggagaa
     2041 aagggacgcg tgcctcgcaa catccaggcg gcattccaat ccactgagct ggtgggaacg
     2101 atcgaagttt cgcgctacgg aaaggtgatg cggatttggc agatgttcct ttgtcgaagt
     2161 tatcggacat tgccgttatg aggagcagct ttgacgtatc ctgtagccgc ttcgctgtgc
     2221 gaagcgcagg cttaatctgt tcacaaagca agcgccacgc gtttcacaga gacgcggcta
     2281 cagcatttaa ggaaaagctt agctttagag cgatgcgaat ccgaaagtac ttcgcagtgt
     2341 tatgacccat acgacgaatt ctcccgcagt ttcggtcatc gttcctgtgt acaacgagga
     2401 ggaaagtgtt ccgatcctgc aagctgagct aagagcagcg ctcagggcca tcgatcacga
     2461 gttcattttt gtcgatgacg ggtcagccga tcacaccgtg gagcgaattg aggccgcgcc
     2521 gaacctgcga gtgatccgtt tcgaaaaaaa tgccggacaa agcgcagcgc tttacgccgg
     2581 cctgcaagcc gcgcgcgggg caattctcgt tccaatcgac ggcgatttgc aaaacgatcc
     2641 cgccgatatt ccaaaattga tcggtgaaat ttcgcgcggc gctgatctgg tttgcggtta
     2701 tcgcgcgctg cgccgggaca cgcttgtgaa acggctcacc agccggatcg ccaacactgt
     2761 tcgtagccgt tacacaaaag acggcgtgcg cgataccggt tgcacgctca aggcgatgcg
     2821 gcgcgaatgc gtgacagcgc tgtttccatt cagggggatg catcggttca ttcctgcgct
     2881 gatcaaagac gcagggtacc ggctggtgga aattccggtg aatcatcgcc cccggcggtt
     2941 tggtcaaact aaatacggtc tgggcaatcg tgccgtgcgc gccactaccg acatgttcgg
     3001 tgtgcgttgg ctgctctcgc ggcgtttgat ttataagatt cgggaagaga actaggagcc
     3061 cagcgctccc ggaaaacgcg cttgtcaagc tatgcgctac cgctaagctt ggcctcccgc
     3121 acggagcatc tgcatgtccc tcgccaattt actttctgcc gagcaaatca ttcccgagat
     3181 gaaagctacg gagcgttggt cggctattgt tgagctgatc gacctccttg taagcctcgg
     3241 caaaatcaag tccgcggatc gcgatccaat tctggccgcg ctaaagcaac gggaggaaac
     3301 aatgagtacg ggcatcggat tcggaattgc cataccgcat tgttcatccg atcggctcga
     3361 cgaagtggtg gctgcgttcg gaagatctac caaaggaatc gagttcgacg cgttggataa
     3421 cgcgcccgta aaattcgttg ttctttttat cgtgccgaaa aatcaatttc aaacgcatct
     3481 gcgcacactg gcttcaatag caaaatttct gaacgaccgc tctgtgcgcg aaagtcttgc
     3541 cagcgcgaaa tccgctgacg aaatcttggc gatttttcgc gaacgttcgt agggaagtgg
     3601 cgcaggcaat cctgtctgcg agattgaaac ttcgcgagca gacatgattg tctgcttcac
     3661 tcgatggaca ccttccagtc acttctcgcg aaaaagcttt ccgacgcttt ggcgagcgcg
     3721 ggcttgccgg cggctggtga gttgacgctg gcgaccgatc cgcggtttgg cgactaccag
     3781 actaatgttg cgctcgtact tgggaagcag cgcggcgaaa atccgcgtgc gctggcagaa
     3841 aagattatag cgcgattgga tgttagcgat gtatccgaac cgcctgctgt cgccggcgcc
     3901 ggattcatca acttcacgtt gcgtcaggcc gcggtggaaa aacagacact cgacatcttg
     3961 cgagatgaac ggctcggtgt cgccgaaaca gaatcaccac gacgcatcgt catcgatttc
     4021 ggatcgccca atgtggcgaa accgatgcat gtcggtcaca tccgcagcac ggcgctcggc
     4081 gacgcgctgg cgcgtgtcgc caaatttctt gggcacgaag tgatccgcga taatcacgta
     4141 ggcgactggg gaacacagtt cgggatggtc atttggggat ggaaaaatct tttggatcga
     4201 caggcgctgc agcgcaatcc gctggccgag attgtccgca tttacaagga aacaaacgac
     4261 cgagcgagca agaacccgga agtgcgggaa gcctgtcgcc aggaactggt gaaattgcag
     4321 gccagcgaca aggaaaacac cgatatttgg aacgaatgcg tggcgttttc gatgcaggat
     4381 ttcgagcacg tttaccggct gctcgacgtg cattacgacc tgcaatgcgg cgaaagcttt
     4441 tacaacgatc ggttgcccgg catagtagat cgcctgctca aggctgggat agcggcaatg
     4501 agtgaaggcg ccgtagtcgt gttcttccat gatgatcccg agttggccga taagccgctg
     4561 atcattcgca aacgagacgg cggattcaat tatgctacga ccgatgtcgc cacgattgat
     4621 tatcgggtaa acgagttgaa agccgacgcc atctggtatg tcgttggcgc gccgcaaaca
     4681 ttgcatttca aacagatttt cgcggtcgct cgtcgagaag gctacaccac cgatctgcgc
     4741 cacatcatat ttggaaatgt gctaggagaa gatcgcaaac tcatgaagac gcgctcgggt
     4801 gagaatgttc ctctgcgcga gcttctcgag gaagcgtgca gacgcgcccg aaaaattatc
     4861 gacgaaaaaa atccggacct gagtgaggag gaaaagaatg acatcgcgga gaagatcggc
     4921 atcagtgccg tcaaatacgc cgatctctcg cagtatcgga cgacagatta tgttttttcg
     4981 tgggacaaga tgctttcgct gcacgggaac accgcgccgt atttgcagaa cgcgtacgtc
     5041 cgaattcgct cgatctttcg taaagcagcc gaggctgctg tagccacgcc cctgtggggc
     5101 gttgaagccg cgcaacaagg agagagcggc cacccgcctt cgccgggcta cggcgaggca
     5161 agcaggccgg tggctacagg attcacgttc gctgagcctg ccgaacgtga tcttgccaaa
     5221 cgactttgtc agttcgcgga gattgttccg caagtgctga acgggtttcg tccgaacatc
     5281 cttgcaaact acctgttcga gctggcgaac agcttccatg ccttttacga agcttgtccc
     5341 gtgttgaaat cagaggaatc ggcccgcagc tcgcgacttg cgctgtgtga tcttactgcg
     5401 cgagtcctac agtgcgggtt ggatcttctc gggatcaaag tgcccgagcg gatgtaggaa
     5461 aacgccgaac gtccaacatc taacgccgaa cgccgaactc tggttttcaa tttcggcgtt
     5521 ggacgttcgg cgttgggcgt tggacgtttt cttcctgttg tgaaaaagga gcacccgcgc
     5581 atcccgacct gcacctaccg gttgcaattc aaccggtggt tcacgtttgc ccaggcgcgc
     5641 gaaatcgtcg cgtatctgga tgcgctcgga gtgagcgacg tttatgcgtc gccgtacttc
     5701 caggcaagtc cggacagcct tcacggctac gacatcgctg atcacaacaa gctgaacgcg
     5761 gcgatcggtt cgcgggcgga ttttgacgcc tgggtggagc aactgcaggc gcacggcatg
     5821 ggccaggtgc tggattttgt tccgaaccac gttgggatcg ccaattcacg gaacgaatgg
     5881 tggatggacg tgctggaaaa cgggcccagt tcggaatacg cgccctattt cgatatcgat
     5941 tgggagccgc taaaatctga cctgcgcgac aaggttctgc taccaattct cggcgaccaa
     6001 tatggacgcg tgctggagcg cggcgaactg caggtgggct ttgaagaggg aacattctac
     6061 ctgttttaca gtgatcgcag gctgccgatc gctccgagca cgtatcgcta cgttctgcag
     6121 attgcgttgc aaaatctcgc cgaatacaag gacgaagatc tttacgcgga actgcaaagc
     6181 attctgaccg cgcttgagta tttaccgaag cgcacagaaa ccgatccgaa acgaatcgcg
     6241 gagcgcgttc gagaaaagga aatcatcaag cgacgtctgg agcggcgttg cgctgaggcg
     6301 cctgaggtgc agcacgcaat cgaaaaggcg ctggttcaga tcaacggcaa accggaggat
     6361 cctcgcagtt tcgatgtgct cgatcgattg ctgaacgagc aggcgtatcg gctggcgttt
     6421 tggcgtgtag ccgccgagga aatcaattac cgccgttttt ttgacgtgaa cgagctggcg
     6481 gcgattcggg tcgagttgcc caaggttttt gacgccgttc accggctgat tctcgagctt
     6541 gtaagcgcag gcgccgtgac aggcctccgc atcgatcatc ccgacggtct ctatttaccg
     6601 cgcgagtatt tcgagaagct tcagcagcgt tgcgccaaag cgctcgggat tgcattgccg
     6661 aaagatggcc gggccattta catgctggcg gagaaaatcc taacggggtc tgaaaggttg
     6721 cgcgcagact ggtgcgtcca tggaactacc gggtacgatt tcgccaatca cgtcatgcaa
     6781 ttgctggtcg atcccgcggc tgagacggcg atcacaaaaa cgttccaccg tttcatcgat
     6841 cactcggtgc ctttcgggca tctgctgtat gcgaaaaagc ttctcgtgat gaaactggcg
     6901 ctggccaacg atgtggatgt tctgagcaac atggttgatc gcttgtccga acaaaaccgg
     6961 tggtatcgcg atttcacgct cgaggcgctc tcgcgcactg tgcgcgaaac gatcgcctgt
     7021 tttccagttt accgaaccta tatagagccc ggccagccgg taagcgaaga agaccggcaa
     7081 atcgtcgagc acgcaattgc cgcggcaaaa cgccgtaatc cggcaatgga agagtcgatc
     7141 tttaattttc tgcgcgacgt gttgctcttc cgcttcccac cgaacctcga tgccgctgga
     7201 cgcgctgcgc acacgcattt ggttttgaaa tttcaacaga ccaccggacc agtaatggcc
     7261 aagggtctcg aggatacggt cttttacatt tacaaccgac tgacggcgtt aaacgaagtg
     7321 ggcggcgacc cagagcaatt cggattgagc gttgacgctt ttcacgagcg gaatcttgac
     7381 cgacagcgca attggccggc gggtttaacg gcgacgtcca cgcatgacac gaaacgcagc
     7441 gaagatgtgc gcgcacggat cgtcgcgatt tcggaaatcc cggagctttg gagaggttcg
     7501 ttgcagcgct ggcacacggc gaaccgccgc tggaaacaga tggtgaatga tttggaagcg
     7561 cccgatgcta acgaagaata tctcctttac caaacccttc tgggcacctg gccaatgcag
     7621 gcaaatggcg agccggagcc tgtgccgacc gcagattaca tcgaacgaat ccaggcttac
     7681 atgacgaagg cgctcaaaga agcgaagatc aacacaagct ggatccaacc taacgaagaa
     7741 tgggacgccg ccatgcataa ttttgtcgcg agaatcttgg attcatccgc gcgaaataag
     7801 ttcctgccgg tcttccttcc tgcagcgaaa gagatgaatc ggcttggggc gattaattcg
     7861 cttacgcaaa ccttgctgaa gctgacatcg cccggtgtgc cagacattta tcagggaact
     7921 gagatttggg actacagcct tgttgatcct gataaccggc gtccggtcga ttacggcctg
     7981 cgccgtcaga tgctgaagtt gctgtcgacc gcgactccgg gagaactaat gcagacgtgg
     8041 ccggatggcc ggatcaaact atttttgaca aagcacctcc tgcaacttcg tcgaggacac
     8101 gcggatcttt tcgagcgcgg cgaatatcta ccgcttcacg cgagcggaac atttgcagaa
     8161 tgctgcgtca gcttcgttcg gcgactcgac gacgattgga ttgcggtgat cgcgccgcgg
     8221 ctctcttcgc gcattgggtt tccacccatt ggggaggctt ggcaagatac ggcaattcga
     8281 ttaccagaaa ccttttcgct cgaggacgcc cacgatctct tcacgtgcca agcgattcgt
     8341 caccacaagc ggcaggtagg agtgcgtgac gtattgtcgg ctctgccgtt cgcggtgatt
     8401 accaatttgc gttaggcgtc ttacacagat gccctacaaa ttagctgttg ttgtagggcg
     8461 tttgtgtcaa acgccaatca
//
LOCUS       DATDAJ010000115         5067 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_748548, whole genome shotgun sequence.
ACCESSION   DATDAJ010000115 DATDAJ010000000
VERSION     DATDAJ010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5067
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_748548"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1317
                     /gene="hemL"
                     /locus_tag="VIS53_02680"
     CDS             <1..1317
                     /gene="hemL"
                     /locus_tag="VIS53_02680"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEY5766723.1"
                     /translation="LERGPVMNGADILVACLEREGVDTIFAYPGGVNSPVRALRNVGG
                     DPFFVAQAQGAQIWDVDGNVYIDYVGSWGPAILGHAPKVVAEAVRDAAPRGLSFGIPN
                     PLEAEMAELICDWVPSIEKVRMVNSGTEATMSCIRLARAFTGRDKVVKFDGCYHGHAD
                     ALLVKVGSGALTHGQPSSAGVPSAFADLTISLPFNNAELLRKAFQENRNEIAAVIIEP
                     IPANAGLYFPREDFLSVLREECTSNDALLIFDEVITGFRVARGGAQEVYGVKPDLTVL
                     GKIIGGGLPVGAFGGRAEIMDQLSPDGPVYQAGTLSGNPIAMAAGLAQLRELERIDGW
                     KLLEKSGTQFEALARDAIKSANIDITFHRLGSMFCLFFAAAPIVDLASAQRSDPKMFT
                     RFFHGCLKRGVYFAPSQFETGFISTAHSRGDIERTGAIVGEALRAL"
     gene            1461..4052
                     /locus_tag="VIS53_02685"
     CDS             1461..4052
                     /locus_tag="VIS53_02685"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766724.1"
                     /translation="MTQNETSRIRPRAKFFFDGDRKFFVKGVTYGPFKPDADENYVGR
                     PEQVDADLALMRDAGLNVVRIYHSPPRWFLDRCAAAGMRVLVTLPWEKHIEFLRERST
                     RKQISENVRAAVKAHAGHPAIFGYLVGNEISSTMSRWLGTRRVIEFVEELIQIGRAMD
                     PDALFSYATYPPTEYLLPQNSDFSCFNVYLHNQRDFEGYLLRLQNLTGEQPLILGEFG
                     MDTIRHSQEEQAEMLGWHIDSVVKCGLAGTILFTWTDEWFTGGQEITDWAFGLVTRDR
                     KPKKAFYTIQEKLGGNNSTSPHLPLPKTPFVSVIVCSYNGGHTLAACLDSLGKLNYPA
                     YEVILVDDGSTDDTAYVAAQFPWVRYIHQTNHGLSYARNAGAAAAKGEVFAYTDSDCM
                     ADVDWLYYLIGTLVSGDYAGVGGPNITPPAQNWIQACVAAAPGGPNHVLLTDTVAEHI
                     PGCNMAFYRWAFEAVGGFDAEYRKAGDDVDFCWRIQQTGWVISFSPSAIVWHYRRFTL
                     RAFMKQQDGYGEAESLLRFKHLIFFGPTGTAKWRGQIYGTTRFSWFVNRPIIYHGIFG
                     EGFFQSIYPAPQSEVAAYLSSIEWFALTIFLFGLGIFLPGLRIVPYLMLGGTFCVALS
                     YMVRARIEPKFDTVHARLLVMILAFVQPLVRGFSRYFTWLRFKRTPANVIRKHEHLPE
                     RARSRGSLSRRVFWSEQGRDRHYFLGEIFRLLEEEGWRYSTDSGWNDWDIQIYGNFWW
                     SIALQTVTEYHGAGKCLTRVRLRNRMVITMIIFNLIAISLLIYHEVNVSRVDLWPVVF
                     YGVILGFLATRARALKSRVAELVDLAAFRAGLQRVSRKGKPVAPTAEPEVEVAANATD
                     PASPQLP"
     gene            complement(4081..>5067)
                     /gene="purM"
                     /locus_tag="VIS53_02690"
     CDS             complement(4081..>5067)
                     /gene="purM"
                     /locus_tag="VIS53_02690"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEY5766725.1"
                     /translation="VDVDLGNKLKRGIQSLVRQTHGPQVLGKIGGFGGLFHASFPRMR
                     EPVLVASVDGVGTKLKIAFAMYKHDTVGMDLVNHCVNDIAVLGARPLFFLDYIGCERL
                     EPRVFQQLLRGLSRACRAAGCALLGGETAQMPGMYRKGEYDLAGCIVGVVDRTKIIDG
                     KNIKSGDVVLGLPSNGLHTNGYSLARKILFERMRLKPSSLLAGSTITVGEELLRVHKN
                     YQPMLSKLTAGVVKGLAHITGGGLIDNLPRILPSNCNAVIETKSWRVPSIFQILQKNG
                     NVDAHEMYQVFNMGIGMAVIVAEQNVRTAMSILRAKRIGRIEPGAGRTVLKF"
BASE COUNT         1063 a         1343 c         1440 g         1221 t
ORIGIN      
        1 cttgagcgcg gtccagtcat gaatggggcg gatattcttg tcgcctgtct ggagcgcgag
       61 ggagtggaca caatttttgc ttatcctggc ggcgtaaatt cgccggtgcg cgcgcttcgc
      121 aatgttggcg gtgacccgtt tttcgtcgcc caggcgcaag gtgcacagat ctgggatgtg
      181 gatggaaatg tgtatatcga ttacgtcggc agttggggac cggcgattct cgggcacgcg
      241 ccgaaagttg tggccgaagc ggttcgcgac gcagcgccgc gcggattgag ctttggaatt
      301 ccgaatccgt tggaagcgga gatggcggaa ttgatctgcg attgggtgcc atcgatcgag
      361 aaagtgcgaa tggtgaatag cggcacggaa gcgacgatgt cgtgcatccg cctcgctcgc
      421 gcgttcaccg ggcgcgataa ggtcgtcaag ttcgacggct gctatcatgg gcacgcagac
      481 gcccttctgg tgaaagttgg cagcggcgct ctgacgcacg gccaaccgag tagcgccggt
      541 gttccctcgg catttgctga tctgacaatc tcgctgccgt tcaacaatgc cgagttgctg
      601 agaaaagcgt ttcaggaaaa cagaaatgaa attgcggcgg taatcatcga gccgatccca
      661 gcgaacgcgg gtctctattt tccgagagag gactttctgt cggtcctgcg cgaggaatgc
      721 acgagcaacg atgcgcttct gatttttgac gaggtgatta ctggctttcg cgttgcccgc
      781 ggcggcgcac aggaagtgta tggagtaaaa cctgatttga ctgtgctcgg aaaaataatt
      841 ggaggcggac taccggtcgg cgcatttggc ggtcgcgccg aaatcatgga ccaactttcc
      901 ccagatggtc cggtgtatca ggcggggacc ttgtctggaa atcccatcgc aatggctgcc
      961 ggtcttgcgc aattgcgcga actggagcga attgatggct ggaaattgct cgagaagtcg
     1021 ggcacgcaat ttgaagccct agcgcgtgac gcaatcaaga gcgcaaacat cgacatcacc
     1081 tttcaccggc ttggttcgat gttttgtttg ttttttgctg ccgcgccgat tgtcgatctt
     1141 gccagcgcgc agcgaagcga tcccaaaatg ttcacccggt tttttcacgg ttgtttgaag
     1201 cgcggcgttt atttcgcgcc gtcacaattt gagactggct tcatctccac agcgcactct
     1261 aggggagaca tcgagcgcac aggcgccatc gtgggtgaag cgttgagagc gctttaggag
     1321 tgagcttccc gcgccattcg ttgttctttc tgtcatgttg agcgaagcga aacatctctg
     1381 gttgtggttt tgttggctga gtatggcaaa tcattcgaga ttctttgctg cgctgagaat
     1441 gacaccataa aacgcccgac atgacacaaa acgaaacctc gcgaatccgt cccagggcga
     1501 agttcttttt cgacggagac agaaagtttt ttgtcaaagg cgtcacgtac ggtccgttca
     1561 aaccggatgc cgatgaaaat tatgtcggcc ggcctgaaca ggtagatgcc gatctggcgc
     1621 tgatgcgcga tgcaggttta aacgttgtgc gaatttatca ttcgccgccg cgctggttcc
     1681 tagatcgttg cgctgccgcg gggatgcgcg ttctggtaac gcttccttgg gaaaaacaca
     1741 tcgagttcct ccgtgaacga tccacacgta aacaaatctc cgaaaatgtc cgcgctgccg
     1801 ttaaggcgca tgcggggcat ccagcaatct tcggttacct ggtcggcaac gaaatctcga
     1861 gcacgatgtc gcgttggctc ggtacgcgcc gagtgattga atttgtcgag gagttaatac
     1921 agatcgggcg cgcaatggat ccagatgcgc tcttttcgta tgcgacgtac ccgcccactg
     1981 aatatctgct cccgcagaat tccgattttt cgtgcttcaa cgtttacctt cacaaccaac
     2041 gcgatttcga agggtatctg ttacgcttac aaaatctcac tggcgagcag ccgcttatcc
     2101 tcggtgaatt cggcatggac acgatccggc attcccaaga ggagcaggcc gaaatgcttg
     2161 gctggcacat cgacagcgtg gtgaaatgcg gtcttgccgg aacgattctt tttacctgga
     2221 cggacgaatg gttcacgggg ggccaggaaa ttacggactg ggcgttcggc ctcgtcacgc
     2281 gcgatcgcaa gccgaagaag gccttctaca cgattcagga aaagctcgga ggaaacaatt
     2341 cgacttcacc tcatcttccg ttgcccaaga cgccattcgt gtcggtcatt gtttgctcgt
     2401 acaatggggg ccacactctt gctgcctgcc tggattcgtt aggcaaactg aattatcctg
     2461 cttacgaggt tattctggtc gatgacggtt cgacggatga cactgcttac gtggccgcac
     2521 agttcccgtg ggtgcgttac attcatcaga ccaaccatgg attaagttat gcccgcaacg
     2581 ccggggcggc tgctgccaag ggcgaagtgt ttgcttacac cgattccgac tgcatggcag
     2641 acgttgattg gctttactac ctgattggca cgcttgtcag tggcgattac gccggagtag
     2701 gcggaccgaa catcacgccg ccggcacaaa attggattca ggcgtgcgtt gctgcggcgc
     2761 cgggcggacc aaaccatgtt ctgcttacag atacagtcgc cgagcatatt cctggttgta
     2821 acatggcgtt ttaccgttgg gccttcgaag ctgtaggcgg gttcgatgcc gaatatcgca
     2881 aggccggcga cgacgtcgat ttctgctggc gaattcagca gactggatgg gtgatctctt
     2941 tcagtccgag tgcgatcgtc tggcattatc gacggtttac gctgcgcgct ttcatgaaac
     3001 agcaagacgg ttacggcgaa gcggaatctt tgctgcgctt taagcatttg atctttttcg
     3061 gcccgaccgg cacagcgaaa tggcgcggtc aaatctatgg cactacgcgg ttcagctggt
     3121 ttgttaatcg cccgatcatt tatcacggga ttttcggtga aggatttttc caatcgatct
     3181 atcccgcgcc gcaatcagag gtcgccgcat acctcagcag cattgagtgg tttgcgttga
     3241 cgatctttct gtttggcctc ggaatttttc tgcctgggct gcgcattgtt ccatacctga
     3301 tgctgggcgg cactttttgc gtcgcccttt cgtacatggt gcgggcgcgg atcgagccaa
     3361 aattcgacac ggtgcacgcg cgcctgctgg tcatgatcct cgcgtttgtg caaccgctcg
     3421 tgcgcggatt ttcccgctat ttcacgtggc tgcgcttcaa acgcacaccg gcaaacgtca
     3481 ttcggaagca cgaacatttg cccgaacgcg cgcgctcgcg aggcagcttg agtcggcgcg
     3541 tgttttggag cgagcagggg agggaccgcc actatttcct gggcgaaatc tttcggctac
     3601 ttgaggaaga aggctggcgc tattccacgg atagcggctg gaacgattgg gatattcaaa
     3661 tttacggcaa tttctggtgg agcatcgcac ttcaaaccgt caccgaatat cacggcgcag
     3721 ggaagtgttt gacacgcgtg cggcttcgca accggatggt tattacgatg atcatcttca
     3781 atctcattgc gataagcttg ttgatttacc acgaagtaaa cgtttctcgc gttgatctct
     3841 ggccggtcgt gttttacggg gttatcctcg gttttcttgc aacgcgagcg cgcgcgttga
     3901 aatcgcgcgt agccgaactg gttgatctcg ctgcctttcg agccggcctg cagcgcgtgt
     3961 cccgcaaagg aaaaccggtc gcgccaacag cagagccgga agtggaagtt gcggcgaacg
     4021 cgaccgatcc agcgtcgccg cagttgccat gattcgcccg cgttcgccgc ggcggacgct
     4081 ctagaatttc aaaaccgttc tcccggctcc gggttcgatc cggccaattc gcttcgctct
     4141 taaaatggac attgcggttc gtacattttg ctccgcgaca atcaccgcca ttccaatccc
     4201 catgttaaag acttgataca tctcatgagc atcgacgttt ccatttttct gcaggatttg
     4261 gaagatgctc ggaacgcgcc agcttttcgt ttcaattacc gcgttgcaat tcgacggcaa
     4321 aattcgcggc agattgtcga tgagcccacc accggtgata tgagcgagcc ctttgaccac
     4381 gccagcggta agtttcgaca gcatcggctg ataatttttg tgcacccgca gcaattcttc
     4441 gccgacggtg attgtggatc cggctagaag cgaactcggt ttgagccgca ttctttcgaa
     4501 caaaattttt cgagccagcg agtagccatt tgtatgcaga ccatttgaag gcagaccgag
     4561 aacgacgtcg ccggatttaa tgttcttgcc atcgatgatt ttcgttcgat ccacgacacc
     4621 aacgatgcag cctgcgagat cgtattcacc cttgcgatac atgccgggca tttgcgcggt
     4681 ctcgccgccc agcaacgcgc aacctgccgc ccgacaggcg cgagaaaggc cgcggagtaa
     4741 ttgctgaaac acacggggct cgagtctctc gcagccgatg taatcaagga agaacagcgg
     4801 acgcgccccg agaactgcaa tgtcgttgac gcagtggttc acgagatcca tgccgaccgt
     4861 gtcgtgcttg tacatcgcga acgcgatttt caatttggtg ccgacgccat cgacactggc
     4921 gaccaacacc ggttcgcgca ttctgggaaa actcgcgtga aataacccgc cgaatccacc
     4981 gattttcccg agtacttgcg ggccatgcgt ttgcctaacg agtgattgga tgccgcgctt
     5041 gagtttatta ccaagatcga catcaac
//
LOCUS       DATDAJ010000116         4051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_750805, whole genome shotgun sequence.
ACCESSION   DATDAJ010000116 DATDAJ010000000
VERSION     DATDAJ010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_750805"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1495
                     /locus_tag="VIS53_02695"
     CDS             <1..1495
                     /locus_tag="VIS53_02695"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEY5766726.1"
                     /translation="ARTATDPSELQEVQQILIETLAQFGIAVGPGDITKGPTITRYEV
                     YPAKGVRVDKIVSLERDLARATSAERINILAPIPGKDTVGIELANTRKVTVKLRELFQ
                     SSDWDSAKEHAKIPLALGKDVYGKTIIADLAQMPHLLVAGTTGSGKSVCINALIASML
                     FRFTPEEMRLVIIDPKMVEMQAYQSLPHLAFPIVTDPKKVLLALRWLIDEMERRYKMF
                     ARVGVRNIVGFNARPKKKTQKELDAEAVESSVSLDRARRSADRADAEPIKVPRDDEEE
                     VPDRIPYVVVIVDELADLMQTAPADVETAIARITQMARAAGMHVIVATQTPRADVITG
                     VIKANIPSRIAFQVASKIDSRVILDENGADRLLGQGDMLYLPPSASRLIRAQGVLVTD
                     NEIHALVEFISKQSPPAFDTAMHEKLQSTSAPEEEVTAEDEELVEKCIEIIRQEKRAS
                     TSLLQRRLRLGYTRAARIVDILEQRGILGPGEGAKPREILVDLDAAV"
     gene            1510..2457
                     /locus_tag="VIS53_02700"
     CDS             1510..2457
                     /locus_tag="VIS53_02700"
                     /inference="COORDINATES: protein motif:HMM:NF024805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5766727.1"
                     /translation="MTIEGLGKKFQEARLARKLTLDEAARMTKIRPQRLAEIEADDFS
                     QFPSLAYAKGFLLIYGKFLDVDVTPYLDAFEDSESVTVDGYSYLQENERAKPVSAPVV
                     RRRPAATGGTGGSNRVSPMPLIVGIVVLVLGFLAMKFFLNVQRLAPGRGSTSVQTSPT
                     VTPAVASGGSSLAGAPNIGAVATSAPVASPALTQGPPETRKALAAGSTAPAEPEVRKA
                     KPVTKEELSQAGAVTNSPPPESGEQNRVAIQPLKRTYVRVTLGDDGKAAFERWVSPAD
                     GPVEFRGKHVSIRVLDPEAVKITKNGQELQQSDQDVTVN"
     gene            2598..4004
                     /gene="rimO"
                     /locus_tag="VIS53_02705"
     CDS             2598..4004
                     /gene="rimO"
                     /locus_tag="VIS53_02705"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEY5766728.1"
                     /translation="MTNTTHFPRKPKIGMISLGCAKNLVDAEIMLGSVLQRGMEITSR
                     AEDADVLVINTCAFIDSAKEESIEAVLEAHQQRGLNKRPDQKLIVSGCMSQRFARELH
                     SELPEVDAFIGLDQVSELGAIVEEMVTRPSRLRDPTNASETHALLFAETRPTYIPDYD
                     TPRFRLTPAHSAYVKIAEGCNHPCSFCVIPQMRGKHRSRKPDSVLAEIRALVGDRVRE
                     INLISQDTTYYGMDLWEARAGPRQPVDSTRGPTLVSLLREIQQIEGEVWVRLLYTHPA
                     HWSDELIETIAECDKVARYIDIPLQHIDESMLGRMRRETSRAHIEDLIHKLRAGISGV
                     TLRTTFIVGFPGETDAEFETLLDFIRRSRFERLGIFKYSQEEGSRAARMPGQVTARIK
                     NSRYRAAMAMQQSIAHDLARKKIGSELKLLVDQPHIARSEGDAPDVDGRVVLSEPAPV
                     GEFIRRTVKGSRGYDLLA"
BASE COUNT          946 a         1089 c         1187 g          829 t
ORIGIN      
        1 agcgcgcaca gccaccgatc cttctgaact acaagaggtc cagcaaattc tcattgagac
       61 gttggcccaa tttggaatcg ccgtaggacc tggtgacatc acgaagggtc ccaccatcac
      121 gcggtacgag gtttatccgg ccaagggtgt ccgtgtggac aagattgtga gccttgagcg
      181 cgaccttgcg cgagcaacga gcgccgaacg aatcaacatt ctcgcgccta tccccgggaa
      241 agacaccgtt ggaattgagc ttgccaatac ccgcaaggta acggtgaaac tgcgcgagct
      301 tttccaatcg tcggattggg actcggcgaa ggagcacgcc aagattccgc tggccctcgg
      361 caaggacgtt tatggcaaga caatcattgc cgacctcgcg cagatgccgc atctgctagt
      421 cgcgggaacg actggcagcg gaaaaagcgt ctgtatcaat gcgttgattg cgagcatgct
      481 ctttcgcttc acgccggaag agatgcgtct cgtcatcatc gatccaaaaa tggtggagat
      541 gcaggcgtat caatcgttgc cgcatctggc tttcccgatc gtgactgatc cgaaaaaagt
      601 tttgttggcc ttgcgatggc ttatcgacga gatggaacgc cgctataaaa tgtttgcccg
      661 cgtaggcgtt cgcaacattg tcgggtttaa tgcgcggccg aagaagaaaa cacaaaaaga
      721 actcgacgct gaggctgtag agtccagtgt ctcactggat cgggcacgca ggtctgctga
      781 cagagcggac gctgaaccga tcaaagtgcc gcgcgacgat gaagaagaag ttcccgacag
      841 aattccgtac gtcgtcgtca tcgtcgatga gctcgcagat ctgatgcaaa ccgcgcccgc
      901 tgacgttgag acggcgatcg cgcgcatcac gcaaatggcc cgagccgccg gcatgcacgt
      961 gattgtcgca acgcaaacac cgcgcgcgga cgtgatcact ggggttatta aagcgaatat
     1021 tcccagccgc atcgcattcc aggtcgcgag caagatcgat agccgcgtca ttctcgatga
     1081 aaacggcgcc gaccgcctgc tcgggcaggg cgacatgctt tatctgccgc cgagcgcttc
     1141 acggctcatc cgtgcgcaag gcgtgctggt cactgataat gagattcatg cgctcgtaga
     1201 atttatttcg aaacaaagtc cgcctgcatt tgatacggcc atgcatgaga agctccaatc
     1261 cactagtgcg cccgaggaag aagtgaccgc cgaagatgaa gagctggtgg aaaaatgcat
     1321 cgagatcatt cgacaggaaa aacgcgcgtc tacttcgctg ctccaaagaa ggttgcgact
     1381 gggttacacg cgcgcggcgc gcatcgttga tattctggag cagcgcggta ttttgggtcc
     1441 cggcgagggc gccaaaccac gtgagatctt ggtcgatctc gatgctgccg tttagccggc
     1501 ttttcgttca tgacaataga ggggctcggt aaaaaatttc aggaggcacg gctggcgaga
     1561 aagctcacgc tcgatgaagc cgcgcgcatg accaaaattc gcccgcagcg gctggcggaa
     1621 attgaggcgg acgatttttc gcaattcccg agcctggcgt acgcgaaagg tttcctgctt
     1681 atttacggga aatttctgga cgtcgacgtc acgccttacc tggatgcgtt tgaggattcc
     1741 gagagcgtga ccgtggatgg ctactcgtac ctccaggaga acgagcgcgc gaaaccggtc
     1801 tctgcgccgg tggttcggcg ccgtcccgct gctacgggcg gtactggtgg cagcaatcgc
     1861 gtttcgccaa tgccgctcat tgtggggata gtggttttag tgctcggttt tcttgccatg
     1921 aaattttttc tcaatgtgca gagactcgca cctgggcgtg ggagcacgag cgtgcaaacg
     1981 tcgccgactg tgactccggc ggttgcctca ggcgggtcga gcctggcagg agctccaaac
     2041 attggggctg tcgctactag tgcgccggtc gcgtcgcctg cattgacaca ggggccgccg
     2101 gaaacgcgca aggccttggc tgctggttcc acagcgccag ctgagccgga agtgcgtaag
     2161 gcgaagcccg tcactaaaga agaactgtcg caagccggcg cagtaaccaa ttcgccacca
     2221 ccggaatcag gcgaacaaaa tcgagtcgcc atccagccgc tcaaacgaac ttacgtaagg
     2281 gtaacgctcg gcgacgacgg aaaggctgcc ttcgaacgat gggtctcccc ggctgatggt
     2341 ccggttgaat ttcgcggtaa gcacgtgtcg attcgggtgc tcgatcctga agccgttaag
     2401 atcaccaaaa acggacagga gctgcaacaa agcgaccagg acgtgacggt gaattagagt
     2461 aagtctgtca ttctgagcga agcgaagaat cccggatcag ttcttcgggc cagccagcca
     2521 atcggaaatg gatcagagat gtttcgcttc gctcaacatg acagcgccgt atgctttgag
     2581 agctagccga aaataagatg acaaacacga cgcattttcc tcgtaaaccg aagattggca
     2641 tgatcagcct cggctgcgcc aaaaatctcg tcgatgcgga gattatgctt ggaagcgttt
     2701 tgcaacgcgg catggaaatt acttcgcgcg cagaggacgc cgatgtgctt gtgattaaca
     2761 cttgcgcctt catcgattca gcaaaggaag aatcaatcga agcagtcttg gaagcgcatc
     2821 agcagcgcgg gttgaataaa cgaccagatc aaaaactaat cgtaagcggc tgcatgtcgc
     2881 agcgctttgc gagagaactg catagcgagt tgcctgaggt agacgcgttc atcggccttg
     2941 atcaagttag tgagcttgga gcgattgtgg aggaaatggt aacgcgaccg tcccggttgc
     3001 gagatccaac caacgcaagc gagacgcatg cgctactttt cgccgaaacc cggcccacgt
     3061 acattcccga ttacgacaca ccgcgtttca gacttactcc cgcgcattcc gcttacgtga
     3121 agattgccga gggctgcaat catccgtgca gtttttgcgt gattccacaa atgcgcggta
     3181 agcaccggag ccgcaaaccg gattccgtcc tggcggaaat ccgtgcgctc gtcggcgacc
     3241 gtgtgcgcga aatcaactta atcagtcagg acaccacgta ttacggaatg gatttgtggg
     3301 aggccagagc cgggccgcgg cagccggtgg attcgactcg cggaccgacg ctggtttcgc
     3361 tgcttcgtga gattcaacag atcgaaggcg aagtctgggt ccgcctgctt tacacgcatc
     3421 cggcacattg gagcgatgaa ctgattgaga ccattgctga atgcgacaag gtcgcgcgct
     3481 acatcgatat tccgctgcag cacatcgatg aatcgatgct cggccggatg cgacgtgaaa
     3541 catcgcgcgc gcatattgaa gacttaattc ataaattgcg ggctggaatt tctggcgtaa
     3601 cgctgcgaac tactttcatc gtcgggttcc ccggcgaaac cgatgcggaa ttcgagacat
     3661 tactggattt catccgccgc agccggttcg aacggcttgg gatattcaag tactcgcagg
     3721 aagagggttc ccgcgcggcc agaatgccag ggcaggtcac cgcaaggata aagaattcac
     3781 gttatcgagc ggcgatggcg atgcagcaat ccattgccca tgatctcgct cgcaagaaaa
     3841 ttggcagcga actgaaactg ctcgtcgatc agccgcacat tgcccggagc gaaggcgatg
     3901 cgccggacgt cgatggacgc gtcgttttgt ccgagcctgc acctgtcggc gagttcattc
     3961 ggcggaccgt caaagggagc cgcggctacg atctgctggc ctgacgggag tcacattttc
     4021 ccgggctgcg agattggttg gtgacaaatc g
//
LOCUS       DATDAJ010000117         4257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_761855, whole genome shotgun sequence.
ACCESSION   DATDAJ010000117 DATDAJ010000000
VERSION     DATDAJ010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4257
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761855"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..884)
                     /locus_tag="VIS53_02710"
     CDS             complement(<1..884)
                     /locus_tag="VIS53_02710"
                     /inference="COORDINATES: protein motif:HMM:NF037626.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEY5766729.1"
                     /translation="MAGSEPIARKLEAIQRAQWPVRFSHVIQPAQPFLAAVLANAYHG
                     RRLDKRQAADSAIWVLCPSVHSQEAFYESMLNWQPDALFLPEAELAGMENVLPDPEIA
                     AERLALFFQIERDTGPRLIVATRTSLDQAAPKRGSLGSAVVQLRRGTTAEMEEFLERL
                     AASGYERVSQVSTRGQYAVRGGIVDLYSWHAPLPFRLEFFGDQIESLREFDIDTQISV
                     RDLRSIDILLNQGAADQSGFVRDYIRKRDLIIDLEPDEVSNARVQISEGWIETGPEDF
                     SGAFQDCEIGEFGAGDLVL"
     gene            complement(1152..2165)
                     /gene="aroF"
                     /locus_tag="VIS53_02715"
     CDS             complement(1152..2165)
                     /gene="aroF"
                     /locus_tag="VIS53_02715"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEY5766730.1"
                     /translation="MIVITQPNATEEQIQRIVTRVREFGLEAQISRGASRVIISVIGP
                     EALLREKAIAAMRGVEAIVPVLKPYKLAARDSRGASSVPIGDVRLGEHEDVVLICGPC
                     SVESKDHILSIATIVKESGARILRGGAFKPRTSPYSFQGLREEGLRFLAEARAMTGLP
                     VVTEVMDPRDLPMIEKYADCLQVGTRNMHNFSLLKEVGRSSLPVLLKRGFSATIYDLI
                     MSAEYILNEGNSNVVLCERGIRTFDNSARYTLDLSAVPILKSKTHLPVIVDPTHALGL
                     REFVPQMSLAAVAAGADALMIEVHDSPEQAKSDGNQALTPEIFAELVPRLRAVAAAIG
                     REM"
     gene            complement(2387..3001)
                     /locus_tag="VIS53_02720"
     CDS             complement(2387..3001)
                     /locus_tag="VIS53_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY5766731.1"
                     /translation="MERFFVKFLCGVLSIGLVLFVTGCGEDPRFSGNTQYVGGVYGGQ
                     QGGGGPPRDTVSYWDGDHASGSPSIKISLGEQRAYFYKGGVLVGVSQLSTGREGLNTL
                     TGNYKIIQKDKDHFSSLFGDYVDASGKVVVANIDVKKDPKPPGTHFQGTPMPYFMRVV
                     SGTGLHAGYLPGYPASHGCIRMPEFMAENFFRSVSVGTPVTITN"
     gene            complement(3175..>4257)
                     /locus_tag="VIS53_02725"
     CDS             complement(3175..>4257)
                     /locus_tag="VIS53_02725"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5766732.1"
                     /translation="FTWWASGTIYFACEDHGQAPIYVATTEPRPEGDNAVIPLEQRDM
                     EIHADDLIWISDTLFFSKMSIGAPNEIWKTAVKGTSHGQTYEPVTYMNDALLSQIDMQ
                     PLESFTFKGANDEEVQGFLVKPPGFDPNKKYPLKFLIHGGPQGAWGNSWTYRWNAELF
                     AASGNYVVVMINFHGSTGYGQKFTDSISGDWGGKPYVDLMKGLDYVEKTYPFIDKNRE
                     AALGASYGGYMANWILGHTDRFKCIVSHDGTFNTESAYGTTEELWFPEWEFNGPPWKN
                     RELYRKFSPHLFADKFKTPTLVVHGQNDYRLDVSEGFQLFTTLQRLGIPSKMLYFPDE
                     GHWVLKPQNSRLWYKTVNDWVDQWCK"
BASE COUNT          944 a         1229 c         1154 g          930 t
ORIGIN      
        1 agcacgagat cgccggcgcc aaactctcca atctcacaat cctgaaacgc gccgctgaaa
       61 tcttccggac ccgtctcaat ccatccttcg ctaatttgga cacgcgcgtt cgaaacttcg
      121 tcaggttcga ggtcgatgat cagatcgcgc ttacgaatat aatcgcgaac gaagccgctt
      181 tggtccgccg ctccttgatt cagcagaata tcgatcgagc gcaaatcgcg cacggaaatt
      241 tgcgtatcga tgtcgaactc gcgcagcgat tcgatttggt cgccgaagaa ttccaatcga
      301 aacggcaacg gcgcgtgcca cgaataaaga tcgacaatcc cgccgcgaac agcgtactgg
      361 ccacgagtgc tgacttgtga gacgcgttca taaccgctgg ccgcgagtcg ttcgagaaac
      421 tcttccattt ccgcggttgt tccgcgccgg agttgaacaa ccgcagatcc aaggcttccg
      481 cgtttcggcg cagcttgatc gagacttgtg cgtgtcgcca cgatgaggcg tggacccgtg
      541 tcgcgttcga tttggaaaaa caacgccagc cgttccgctg cgatttccgg atcgggcaag
      601 acattttcca tcccggccag ctctgcttct ggcaggaaaa gcgcatctgg ctgccaattg
      661 agcatgcttt cgtaaaacgc ttcctgcgaa tgaacgctgg ggcagaggac ccaaattgcg
      721 gaatccgcag cctgccgttt atcaagccga cggccgtgat aggcatttgc gagcacggca
      781 gccagaaacg gctgcgccgg ctggatcaca tgggaaaatc gtacgggcca ttgagcccgt
      841 tgtatcgcct cgagcttgcg cgcgattggc tcgctcccag ccacgcgctc caaaagttcc
      901 gctgattttt ccaccgcaaa ctttacgcca aatcaggcag aattgtagcc gcgttgctgt
      961 agcgtgcgct gtcctcagcg cagaagtgcc gcggcgacgc aaagatccgc tgaggacagc
     1021 ggactctaca ggacagtgtt cttccgcctt cggcgatttc ataacggcat cgtctgcagg
     1081 aaaagccgat ccaccaaggt ggaacgcgtt gtcctcaacg cgttggcaac caggcgtgcg
     1141 aaccgcagtt gctacatttc gcggccaatg gctgcggcga ctgcgcgcag ccgggggacg
     1201 agctcggcga aaatttccgg cgtaagggcc tggttaccat cgctcttggc ctgctccgga
     1261 gaatcgtgca cctcaatcat gagggcatcc gcgccggcgg caacagcggc gagagacatc
     1321 tgtggcacga actcgcggag accgagcgcg tgcgttgggt cgacgatcac gggcaaatgc
     1381 gtttttgatt ttaagatggg aacggcgctc aaatcgagcg tgtaacgcgc agagttatcg
     1441 aacgtgcgaa tgccgcgctc gcacaggacc acgttggagt tgccctcgtt caggatgtat
     1501 tccgcgctca tgatcaaatc atatatcgtc gcgctgaatc cgcgcttcag cagcactgga
     1561 aggctgctac ggcccacctc tttcaagagc gaaaaattgt gcatattgcg cgtgccgacc
     1621 tgaaggcaat ccgcatattt ttcgatcatc gggagatcgc gcgggtccat gacttccgtc
     1681 accacaggca ggccggtcat cgcgcgcgct tcggcaagaa aacggagtcc ttcttcgcgt
     1741 aggccctgaa aactgtatgg tgacgtgcgt ggtttgaacg cgccgccgcg caaaattctt
     1801 gcgcccgatt ctttcacgat cgtagcgatc gataaaatgt ggtctttgct ttcaaccgag
     1861 cagggcccgc aaatgagaac cacgtcctcg tgttcgccca gccgaacatc tccaatcggc
     1921 accgaggaag cgccgcgtga atcgcgcgcc gcaagtttgt aaggcttcag cacgggcacg
     1981 atcgcttcca cgccgcgcat tgctgcaata gctttttcgc gaaggagtgc ctcaggcccg
     2041 atgacgctga tgatcacccg tgatgccccc cggctgattt gggcctcaag cccgaattcg
     2101 cgaacgcgcg tgacgatccg ctggatctgt tcctcggtgg cgttcggttg cgtgattacg
     2161 atcatattac tcgtgcggga tcatcagaat gaagtgagcg ggtattttct gcaagcccag
     2221 atacaacgcc gaataaagcc agaggtttca atcaacatcg cttctcacat gcccagcaga
     2281 cgtcttttgt agggcgtctg tgtcagacgc cacccagggg gtctgtaggg gaagctgaca
     2341 gcgtcccaag ggcgacaacg tcgtgcccta cagccgctcg cggagctcaa ttcgtaatcg
     2401 tgaccggtgt gccaactgag acggatctaa agaaattttc cgccatgaat tccggcatgc
     2461 ggatgcagcc gtgcgaagcc ggataccccg gcaaatagcc ggcatgcaac cctgtccccg
     2521 acaccacccg cataaagtag ggcatcggtg tgccttggaa gtgtgtgccg ggcggttttg
     2581 gatccttttt tacgtcgatg ttggcgacga ccaccttgcc agacgcgtcc acgtaatcgc
     2641 cgaacaaact ggagaagtgg tccttgtcct tttgaatgat tttataatta ccagtcagag
     2701 tgttaagtcc ctcgcggcca gtggacaatt gcgaaacccc gacgagcacg ccgcctttgt
     2761 aaaaataggc gcgctgttct ccgaggctga tcttgatcga aggactaccg ctggcgtgat
     2821 cgccgtccca atatgagacg gtgtcgcgcg gtggaccgcc accaccctgc tggccgccgt
     2881 aaacgccgcc tacatattgg gtgttgcccg aaaagcgcgg atcttcgccg catcctgtga
     2941 cgaataaaac gagcccgata gagagaactc cgcacaaaaa cttaacaaag aaacgttcca
     3001 taaattctcg aagcgtttta atgcgcaact cgcgcaaaaa gtcaaggggg cagagtgcaa
     3061 ttaacgcgac gtaactcagg catcctgcct ggttcgtctg gcaggcttcc cagcctgtcc
     3121 aagtcatgcc gacaagcagg atgcatgtcg gacggaacag gctggaagcc tgtgttactt
     3181 acaccactga tccacccaat cgttcacggt tttgtaccac aaccgcgagt tctgcggctt
     3241 gaggacccaa tgaccttcgt cggggaaata taacattttg gacggaatcc ccaatcgctg
     3301 cagcgttgtg aagagttgaa atccttcact cacgtcgagc cgataatcat tctggccgtg
     3361 aaccaccagg gtcggcgttt tgaatttgtc ggcgaacaag tgcggtgaaa atttccggta
     3421 cagttcgcgg ttcttccacg gtggcccgtt gaattcccat tctggaaacc aaagttcttc
     3481 ggttgtgccg tacgcggact ccgtattaaa cgtcccatcg tgcgacacga tgcatttaaa
     3541 ccggtcggtg tggccgagga tccagttagc catgtaaccg ccgtagctgg cgcctagcgc
     3601 cgcctcgcgg tttttgtcga tgaacggata agttttctcc acgtaatcga gccccttcat
     3661 caggtcgaca tacggcttgc cgccccaatc gccgctgatc gaatccgtaa atttctgccc
     3721 gtaaccggtc gagccgtgga aattgatcat caccaccacg taatttccgc tcgccgcgaa
     3781 caactccgcg ttccagcgat acgtccacga atttccccat gccccttgcg gcccgccgtg
     3841 gatcaaaaat ttcagcgggt attttttgtt cggatcgaat cccggcggct tgaccagaaa
     3901 gccctgaacc tcttcgtcat tcgcgccttt gaacgtgaac gactccaacg gctgcatatc
     3961 gatttgtgac aacagcgcgt cattcatgta ggtcacgggc tcgtatgttt ggccgtgtga
     4021 cgttcccttc acggcggttt tccagatctc atttggtgcg ccgatcgaca tcttcgaaaa
     4081 gaacagcgta tcggaaatcc aaattagatc gtcagcatga atttccatat cacgctgctc
     4141 taagggaatg acagcgttgt cgccctcggg gcgaggctct gtagttgcga cgtaaatcgg
     4201 agcttgaccg tgatcttcac aagcgaagta gatcgtcccg gaggcccacc acgtgaa
//
LOCUS       DATDAJ010000118         4541 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_761877, whole genome shotgun sequence.
ACCESSION   DATDAJ010000118 DATDAJ010000000
VERSION     DATDAJ010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4541
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761877"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VIS53_02730"
     CDS             complement(<1..218)
                     /locus_tag="VIS53_02730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766733.1"
                     /translation="MNVIDVTPRPAAVSAAVRFLQRSFMSILGILFILTALKWGTLLF
                     VVPQYETVIITRFGKIVRTITTPGLKMKL"
     gene            complement(397..1380)
                     /gene="hflK"
                     /locus_tag="VIS53_02735"
     CDS             complement(397..1380)
                     /gene="hflK"
                     /locus_tag="VIS53_02735"
                     /inference="COORDINATES: protein motif:HMM:TIGR01933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEY5766734.1"
                     /translation="MQRPDVAEHLPIKPLRLLLGVIACAGIAVLLFTLLFGFMTIPAN
                     SVGVRTRFGAYHAIVNPGLTYAIPYVDQIHIVSTQRLQKLEFGFSTPGAMNMYQGDPQ
                     PEETETMITGDLNTALVPWVVQYRITDPKMYLFGAREPEKTLRDLSESVMREVIGDRT
                     VDEVLTIGRHDIETSTLKRLADLCSQYDLGIQIQQVQLTSVRPPPAVQAAFNDVNQAQ
                     QEKQTAINQAWAVYNDAVPNARGQAKEREKQAEAYAFRRVNEAKGEAQKFSLLLAEYR
                     KAPEVTRRRLYLEAMQAILPRLEKKIIVDDSLKNILQTLPLQAPGESRSSP"
     gene            1607..2146
                     /locus_tag="VIS53_02740"
     CDS             1607..2146
                     /locus_tag="VIS53_02740"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY5766735.1"
                     /translation="MNIKNTILSAIIGLATFTCMAATESQTQPEVGKPAPDFSLTTGD
                     GSQVNLKDYRGKWVVLYFYPKDFTSGCTMEARNFQRDIAKYGDAGAVILGVSVDTAQS
                     HKDFCAKEGLNFKLLADPDAKVSTDYGSVMDYKGQKLAARNTFIINPDGEVVKVYTGV
                     KPAEHSEQVLKDLAELKKS"
     gene            2166..2357
                     /locus_tag="VIS53_02745"
     CDS             2166..2357
                     /locus_tag="VIS53_02745"
                     /inference="COORDINATES: protein motif:HMM:NF018096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HEY5766736.1"
                     /translation="MAAQRKSIDCRDYPSEKNCSLKISGTEEEVLDAAVQHAASVHGH
                     ENTPKLREQIKSMLKDERD"
     gene            complement(2374..3270)
                     /locus_tag="VIS53_02750"
     CDS             complement(2374..3270)
                     /locus_tag="VIS53_02750"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY5766737.1"
                     /translation="MNIHHLELFYFVAKHGGIAAAVRNIPYGIQQPAVSGQIAKLEES
                     LGTKLFQRRPFALSPTGTELFEFIQPFFENIDIVAERLRQNSSPQLRIAAPAIVLHDY
                     LPQILQRVRAKFPAFRLYLHEATRTDAERLLLAREVDLAIMLLDKKSRAGIQVRPLLE
                     LPLILLVHKKSKLTRAEELWKRDKIEETLVCFSRSDPVHAYFQRGLQRLGVEWFCGIE
                     VTSERLIQQYVANGYGIGLTVAVPGFKPPSRLRALPLSNFPAVVVGVAWCGKLSDITR
                     QLLAELDIEAETQRARIRKGGS"
     gene            3379..>4541
                     /locus_tag="VIS53_02755"
     CDS             3379..>4541
                     /locus_tag="VIS53_02755"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEY5766738.1"
                     /translation="MEFLGFLIIGFLIAILVLPFVALAKAKRARRGVDDLARRLSSLE
                     NELRNLRPQTGSAVQPEAPVAAPEPRVEAVPPPIPAITPAPVVSKATPEPPPIPQDLL
                     KPSAPQIARPAKPPIDWEQFMGAKLFAWIGGFALFLGIAFFVKYSFEHNLIPPELRIA
                     IGFIVGVGLVVGGLLLKRKENAVTAQTLCATGILVLYAVTFACRAYYHFAFFGLIPTF
                     LLMTLITAVAFLLSVRMNAIIVAVLGIAGGFLTPILLSTNEDNPLGLFGYIVLLDVGL
                     LALAQRQRWNALPILGAIGTALMQFAWVDAFFVPEKYFAGNKVLIFMAVFVGFQALFL
                     SAVTWRKRTEKANTTVFACAIGLAAVAMFSAFYLLGFPPVAHRPALLFTYLFV"
BASE COUNT         1028 a         1263 c         1238 g         1012 t
ORIGIN      
        1 agcttcatct tcaacccagg cgtcgtgatt gtccggacga ttttgccgaa tcgcgtgatg
       61 atcaccgtct catactgggg cacgacaaag agtaatgttc cccatttcaa tgcggtcaga
      121 atgaaaagaa tgcccaggat cgacatgaac gagcgttgca aaaaacggac cgcagcagac
      181 acggcagcgg gtcgcggagt cacatcgatc acgttcatgt gtttacgtgc ctaaaaccgc
      241 gcgttgctgt cattctgaac ccgcaatcgc cggagaagaa tctcagatca tttgcatcgg
      301 cggtgtgcca agtcgcatcc agagatgttt cgcttcgctc aacatgacag agaaggtgcg
      361 ccaaggcgga ccacaagagc attaaacaga tcacgttcat ggcgagctcc tcgattcgcc
      421 gggcgcctgc agcggcagcg tctggagaat attcttcagg ctgtcatcca cgatgatttt
      481 cttttccaaa cgcggcagga tggcttgcat cgcctcgaga taaaggcgtc ggcgcgtcac
      541 ttccggcgct ttgcgatact cggcgagcaa caacgaaaac ttttgagctt cgcctttggc
      601 ttcattcacc cgtcgaaacg cgtacgcttc cgcctgtttc tcgcgctctt ttgcctggcc
      661 acgcgcattc ggaacagcgt cgttatagac ggcccatgcc tggttgatcg cggtctgctt
      721 ttcctgttgc gcctgattga cgtcgttgaa tgccgcttgc acggccggcg gcggacggac
      781 actggtgagt tgaacctgtt gaatctggat tcccaaatcg tattgagaac agagatcggc
      841 caaacgtttc aacgtcgacg tctcgatgtc gtggcgcccg atcgtcagca cttcgtccac
      901 cgtgcggtcc ccgattactt cgcgcatcac gctttccgag agatcgcgta acgttttctc
      961 cggttcacgc gcaccgaaca aatacatttt tggatcagtg atccgatatt gcaccaccca
     1021 tggcacaaga gccgtgttta gatcgcccgt gatcatcgtt tcagtttcct caggttgcgg
     1081 atcgccctgg tacatgttca tcgcgccggg cgtggaaaaa ccgaactcga gcttctgcaa
     1141 acgctgggta gacacgatgt ggatctggtc gacgtacgga atggcatagg tcaaacccgg
     1201 gttcacgatg gcgtggtaag cgccaaaccg ggtcctcact ccaacagagt ttgcggggat
     1261 ggtcatgaac ccaaatagca gcgtgaatag taggactgcg atcccagcgc aggcgattac
     1321 acccagaagc agtcgcaacg gtttaatggg aagatgttcg gcaacgtccg gcctctgcat
     1381 aaaagcgctg ttattcactc aaagctgtca ctcaagcgca agctttcatt ctggcaagcg
     1441 cacgcgcctc gtgtgctggc gatggcgccc tcgccatcgc gaacttttcg aaaggcaacg
     1501 tcattaggac acctgaggtt tgccgcgagg gcggcaaaca gcacgcgagg cgcgtgcggt
     1561 ccccacagtt tcttgactcg ccgcttgcgc actcgaaaac tgaggcatga atatcaaaaa
     1621 cacgatcttg tcggcgatca taggtcttgc gacattcacg tgcatggcgg caacagaatc
     1681 tcaaacgcag cccgaagtcg gcaagcccgc gccggatttt agtctcacca ccggagatgg
     1741 ttcgcaggtg aatctgaaag attatcgcgg caaatgggtg gttctttatt tctatcccaa
     1801 agatttcacc agcggttgta cgatggaggc gcggaatttt cagcgagaca tcgcgaaata
     1861 tggcgatgcc ggcgcagtca tcctcggagt aagcgtcgac accgcgcaat cgcacaaaga
     1921 tttttgcgcg aaagaaggcc tcaatttcaa attactcgct gatcccgacg cgaaagtctc
     1981 caccgattac ggctcggtca tggattacaa gggccaaaaa ctcgccgcgc gtaacacgtt
     2041 tatcattaat cctgacggcg aggtcgtaaa ggtgtatacc ggcgtgaagc cagccgagca
     2101 cagcgagcaa gtgttgaaag atttggcaga gttaaagaag agctgaacta aactggaggt
     2161 caccaatggc agcgcagaga aaatccatcg attgcaggga ttatccgagc gaaaagaatt
     2221 gctcgctcaa aatttccggc acggaagaag aagtgctcga cgcggcggtg cagcatgccg
     2281 cctccgttca cgggcacgag aacacgccga aattacgtga gcagatcaag tcgatgctca
     2341 aggacgaacg cgactgaaag aagtcgccac ggattacgat ccgccttttc ggattcgcgc
     2401 ccgttgcgtc tctgcctcga tgtctagttc tgcaagtagt tggcgcgtga tgtcggaaag
     2461 tttaccgcac cacgcaacac caacgactac agccggaaaa ttcgataacg gaagtgcgcg
     2521 cagtcgcgat ggtggcttaa agccgggcac tgcgaccgtc aaaccgatgc cgtaaccgtt
     2581 ggcgacgtac tgctggatca atcgctcgga tgtgacttcg atcccgcaaa accattccac
     2641 cccgagccgc tgaaggccgc gctggaaata cgcatgaacg ggatcgctcc gtgaaaagca
     2701 caccagtgtt tcctcgattt tgtcgcgttt ccacaactct tcagcacgcg tcagcttgga
     2761 tttcttgtgc accaacagaa tcaacggcag ttccaatagc ggacgcacct gaattccggc
     2821 acgcgatttt ttgtcgagca gcatgatggc gagatcgact tcgcgagcca aaagcaaccg
     2881 ttcggcatca gtgcgggtcg cctcgtgcag atacagccgg aacgccggga actttgcgcg
     2941 aacacgttgc aggatttgcg gcagataatc gtggagcacg atcgccggag ccgcgatccg
     3001 caattgcggc gagctgttct ggcggagcct ctcagcgaca atatcaatgt tctcgaagaa
     3061 cggctgaatg aactcgaaaa gctccgtgcc cgtgggcgag agcgcaaatg gacgccgctg
     3121 aaagagcttc gtgccgagtg attcctccag tttggcaatt tgaccgctga cggccggttg
     3181 ctgaatgccg tacggaatat tccgcaccgc tgctgcgata ccgccgtgtt tcgcgacgaa
     3241 gtagaacaac tccagatgat gaatgttcat gatcgaaagg gtcgatgaaa tccctcattt
     3301 ttatcaattc acggtcggcg cgcaaagcag gtatcctctg tcacaaagcc ggagtgatcc
     3361 agccaacccc aacaaccaat ggaattccta ggtttcctta taattggttt tctaatcgcc
     3421 atactcgttc tgccgtttgt cgcgctagcg aaagcaaaaa gggcaaggcg cggcgttgac
     3481 gacctcgcca ggcgattgtc atccctcgaa aacgaactgc gcaacttacg gccgcaaacg
     3541 ggttcggctg tgcaaccaga ggcacctgtg gcggcgcccg agccaagagt ggaagccgtt
     3601 ccaccaccga tcccagcgat aacacctgct cccgtcgtat ccaaggcaac gccagagccg
     3661 ccgccaatcc cacaggacct cctcaaaccg agcgcgccgc aaatcgcgag accagccaaa
     3721 ccgccgatcg attgggagca attcatgggc gcgaaattgt tcgcgtggat tggcggattc
     3781 gcgcttttcc tgggcatcgc atttttcgtg aaatattcgt tcgagcacaa tttaatcccg
     3841 ccggagcttc ggattgcgat tgggttcatc gtcggggtcg gtcttgtcgt tggcggtttg
     3901 ctcctgaaac gaaaagaaaa cgcggtcact gcgcagacgc tctgcgcgac cggcatcctg
     3961 gttctctacg ccgtgacgtt tgcatgtcgc gcttactatc acttcgcgtt ctttggtctg
     4021 atcccaacgt ttctgttgat gacgctgatc acagcggtcg cgtttctgct ttccgtgcgg
     4081 atgaacgcta tcatcgtcgc ggtgctcggg atcgcgggtg gatttctcac tcccattttg
     4141 ctctcaacga acgaggacaa tccgctggga cttttcggtt acatcgtgct gctcgacgta
     4201 ggcctgctcg cgctggcgca acggcaacgg tggaatgcgt tgccgatcct gggcgcgatt
     4261 ggaacagcgc tgatgcaatt cgcctgggtc gacgcgttct ttgttccgga gaaatatttc
     4321 gccggcaaca aagtcctcat tttcatggcg gtatttgtcg gatttcaggc gctgtttctg
     4381 tccgcggtca cgtggagaaa gcgcaccgaa aaagcaaaca ccacagtttt cgcatgcgcg
     4441 atcggtcttg ccgcggttgc gatgttttcg gcgttttacc ttcttggttt cccgccagtc
     4501 gcgcatcggc cggcgctgtt gttcacttat ctgttcgtca t
//
LOCUS       DATDAJ010000119         3293 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_763546, whole genome shotgun sequence.
ACCESSION   DATDAJ010000119 DATDAJ010000000
VERSION     DATDAJ010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_763546"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..1373
                     /locus_tag="VIS53_02760"
     CDS             177..1373
                     /locus_tag="VIS53_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HEY5766739.1"
                     /translation="MADAYVSMPLPASGSGKTLALDVGCPSRRRFAEAGWMLDVRFMH
                     PHDKLFIPGPVEVSEKTWEAFSRPLIGHRSEDFKNLYREIHPKLQTLFDTKQPVFLST
                     SSAWGVMEASIRNVVDRGVLCCMCGAFSDKWFDVAKRCGKNAEPLQVEWGKHIDQKDL
                     DRQLATGKFDTVTLTHSETSTGVMNPLPEICCVLAKYPDVALIVDTVSSFSAVKIDMD
                     SLGIDVMLTGAQKALALPPGFSLFSVSQKAFERADKVPNRGFYFDFLEFKREQAQFMT
                     PSTPSIGHVHALQFKLDEIFEEGLEARYARHARTNELVHDWVRRRGFDFFAEEGFRTK
                     TLTCVKNNKGIDVLDFARRLRDKHHLVIDPGYGKIRGQTFRLSNMGDETDETVSHLLA
                     CLDDVL"
     gene            1406..2431
                     /locus_tag="VIS53_02765"
     CDS             1406..2431
                     /locus_tag="VIS53_02765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5766740.1"
                     /translation="MPAIEASNLTKIYRTYRKERGLWGAVKGLGWRRYDETRAADQVT
                     FQVEEGEFVGFLGPNGAGKTTVLKMLSGLLNPTSGDARVLGFVPWERRNEMKRQFSLL
                     MGQKNALWWDLPAQESLELNRAIYGIDRERFKKVVDGLSELLEVRDKMNVMVRELSLG
                     ERMKMELIAALIHEPRVLFLDEPTIGLDVVSQKRVREFLRIYNEEHRIVTLLTSHYMQ
                     DIEELCDRVLVIDHGKIFFDGPLAAIVDRFSIYKILSLTFETEGTRDLSAFGEIIEQT
                     PVSVQLKVPRAKVTETCRRLLEACDVSDINVQEVPVEDVIRQLFGERREDRPESGVLA
                     AEAAPVS"
     gene            complement(2545..>3293)
                     /locus_tag="VIS53_02770"
     CDS             complement(2545..>3293)
                     /locus_tag="VIS53_02770"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY5766741.1"
                     /translation="DLVKPYSNRVIDISQRGDVAKRAGAFDAVIHCASSGGGDAEAYR
                     QIYLNGARHLLETFGKAKILFTSSTSVYAQRDGSWVTEASETKPLRETSRILLEVENL
                     ILEKGGIVARLAGIYGPLRSALLSKFLNGTATIDPNNDRFVNQVHRDDIASALFLLLN
                     PEAQISAQIYNVIDDQPLLQSECYRWLAQRLKRPLPPTKKSEQPRKRGDTNKRVSNTK
                     LHQLGWTPDYPTFGDAMEKSVLPSFADVVP"
BASE COUNT          758 a          834 c          924 g          777 t
ORIGIN      
        1 ccacgcggcc gtttgcccac tggaaaggtt tcgacaacgc tatctgtggc tccatcaatg
       61 accgtgacat cgcctgagcg ttcgttgctg acgaacacca gacagctcga cggttcagca
      121 cgcgtcgtag cggggagaag gacgcaaagg acccaacaga taaacaggcg atgcatatgg
      181 ctgacgcgta cgtctcaatg cctttgcctg caagtgggtc cggcaaaact ttagcattag
      241 atgttggatg cccgtcgcgt cgtcgctttg cggaggcggg ttggatgttg gatgttcggt
      301 tcatgcatcc gcacgacaag cttttcattc ccggtccagt tgaagtttcc gaaaaaacct
      361 gggaggcgtt ttcgcggcca ttgattggac atcgcagcga agatttcaag aatctttacc
      421 gcgagattca tccaaagctt cagacgttgt tcgacacaaa gcagccggtg tttctttcca
      481 cgtcatcggc atggggagtt atggaagcat ctattcggaa cgtagtcgat cgcggtgtgc
      541 tttgctgcat gtgcggcgcg ttttctgaca aatggttcga tgtcgcgaag cgatgcggga
      601 aaaacgcgga accgcttcag gtggaatggg gaaagcacat cgaccagaag gatctcgatc
      661 ggcaactggc cactggaaaa ttcgataccg tcacgttgac ccacagtgaa acctcgaccg
      721 gcgtgatgaa tccgcttccc gagatttgct gcgtcctggc caaatatccc gatgtcgcgc
      781 tgattgtcga tacggtctcg tctttctctg ctgtgaaaat cgacatggac tcgctcggga
      841 tcgacgtgat gctcaccgga gcgcaaaaag cactcgcgct gccgccgggc ttttcgttgt
      901 tctcagtttc gcagaaagcg ttcgaacggg ccgacaaagt tccgaatcgc ggattttatt
      961 tcgatttcct ggagttcaag cgcgagcagg cgcaattcat gacgccaagc acgcctagca
     1021 tcggacacgt tcacgcgctc cagttcaagc tggacgaaat tttcgaggaa ggcctcgagg
     1081 cgcgttacgc tcgtcacgca cgcacgaacg agctcgtgca cgattgggtg cgacgccgtg
     1141 gattcgattt ttttgccgag gaagggttcc gcaccaagac gctgacgtgc gtcaagaaca
     1201 ataaaggcat cgacgttctg gatttcgcga gaaggctgcg ggacaaacat catctggtga
     1261 ttgatcccgg ttacggcaag atccgcggtc aaacttttcg cctctcgaac atgggggacg
     1321 aaacggacga aaccgtttcc catttactcg cgtgtctgga tgacgtcctg taggggaagc
     1381 tgtcagcttc ccctacaaag cttttatgcc ggcaattgaa gcatccaacc tgaccaagat
     1441 ttatcgcact taccgcaaag aacgcggtct ctggggcgct gtgaaaggtc tcggctggcg
     1501 gaggtacgac gaaacgcgag cggccgatca agtcacattt caggtcgagg aaggcgagtt
     1561 tgtcggattc ctgggcccga acggagccgg gaaaacgact gtgctcaaaa tgctttccgg
     1621 cttgctgaac ccaacttcag gcgacgcgcg cgtgctcggc tttgttccct gggaaaggcg
     1681 taatgaaatg aaacggcagt tcagtctgct gatgggacaa aagaatgcgc tctggtggga
     1741 tcttccagcg caggaatcgc tcgagctgaa ccgcgcgatc tacggcatcg accgcgagcg
     1801 gtttaagaaa gtcgtcgatg ggttatcgga acttctggag gtgcgggaca aaatgaacgt
     1861 gatggtgcgt gagctttcgt taggcgaacg aatgaaaatg gagttgatag cagcgctcat
     1921 tcatgaacct cgtgtattat ttcttgatga accgacaatc ggtctggacg tggttagcca
     1981 aaaacgagtc cgcgaatttt tgcgtatata taatgaggag catcgcatcg tcacactgct
     2041 caccagccat tacatgcagg acatcgagga attgtgtgat cgggtgttgg taatcgacca
     2101 cggcaagatc tttttcgacg gcccgctggc agcgatcgtc gatcgttttt caatctataa
     2161 gattctgagt cttactttcg aaaccgaagg aacacgcgat ctgtccgcgt ttggcgaaat
     2221 catcgaacaa acacctgtct cggtgcaatt gaaggttcca cgcgcaaagg ttacggaaac
     2281 ctgccggcga cttctcgagg cctgcgatgt cagcgatata aacgtgcagg aagtgccggt
     2341 agaagatgta atccgccagc tgttcggtga aagacgtgaa gatcgtcctg aatccggtgt
     2401 gctggccgcg gaagctgcac ctgtcagtta gcgacgaccg ccccgtttgt cattctgagc
     2461 ggagcgaaga agctctgatg agttctttgg acgcgacggt ctgcccgaca tccagaaatg
     2521 gttcgcttcg ctcaacatga catgtcacgg aacaacatca gcaaaactgg gcagaacgct
     2581 tttttccatt gcatcgccga atgtcggata atccggagtc catcctaact gatgtaattt
     2641 agtgttgctt acacgtttgt tggtgtcgcc acgtttgcgg ggttgctcgg attttttggt
     2701 cggcggcaga ggtcgtttca gcctctgggc aagccagcgg tagcattcgc tttgcaaaag
     2761 cggctggtcg tcaatgacgt tgtaaatctg tgcggatatc tgtgcttccg ggtttaacaa
     2821 aaggaagagc gcggacgcga tatcgtcccg atgtacttga ttaacaaacc ggtcgttgtt
     2881 tggatcaatg gtcgccgtgc cgtttaggaa tttactcaac aacgcagaac gtaacggccc
     2941 gtaaatcccc gcaagccgcg ctacgatccc gcctttttcg aggattaagt tttccacttc
     3001 taaaaggatc cggctggtct cccggagcgg ttttgtctcg ctcgcttccg ttacccacga
     3061 gccatcgcgc tgcgcgtaaa cactggtgct gcttgtaaac agaatttttg ctttgccaaa
     3121 agtttcgaga agatggcgcg cgccgttgag gtaaatctga cgataagctt cggcatcacc
     3181 gccacccgaa ctggcgcaat ggatcactgc atcgaatgct cctgcgcgtt tagcaacgtc
     3241 accgcgttgg gagatatcga tcacccgatt ggaatacggc tttactagat cgg
//
LOCUS       DATDAJ010000120         5563 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_773498, whole genome shotgun sequence.
ACCESSION   DATDAJ010000120 DATDAJ010000000
VERSION     DATDAJ010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5563
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_773498"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VIS53_02775"
     CDS             complement(<1..330)
                     /locus_tag="VIS53_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766742.1"
                     /translation="MKDSVVRGCLLQLLYERRSEGSIPFGQGEQAVLPPGGISRRDWL
                     RALAQLSEYHLIDWTPLEDQSGMGLLSGFAKINDFGVKVFEGDVAPPIQISMDERRRT
                     RVPRREQA"
     gene            586..1080
                     /locus_tag="VIS53_02780"
     CDS             586..1080
                     /locus_tag="VIS53_02780"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5766743.1"
                     /translation="MALTQSRKVNIMNTLTTWNPLREMEQATQNRFNPFFLGGFPNRM
                     GSGEIHSLAVADWSPEVDISEDDRGYLLKADLPEMKKDDVRVTVEDGILCVSGERKSQ
                     KEDQKKKFHRIERSFGTFRRSFTLPEDADSTKVTAEFHDGVLKVHLPTTPIARSKAIE
                     VKVK"
     gene            complement(1210..2202)
                     /locus_tag="VIS53_02785"
     CDS             complement(1210..2202)
                     /locus_tag="VIS53_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5766744.1"
                     /translation="MKRSKTRALIRNTRGRSALSATSKRAMTQAGSARSSDKEVMVHL
                     SRSQIFKDYERAFSEAMGLPLNIRAHHSWSPAHHGKTDHDSFAAILARFNQARAACLR
                     AQTDASQEPTSTTRTATWFAGLSESAVPVYVGDHILGFLETGEVMLKNPTKKHFASIT
                     RQLRAWGYKTDWKQLERAYFRSCVLSPIRYRAMLRLLSLFAQHLSILSNQLVVRREKD
                     ETTNMTRARQFIEDHQAEPLSLGRIAQVANISRHYFCKMFKKATGMNFVDYLSRVRVE
                     KSKTLLLNPNSRVSEVAFACGFQSMTNFNREFKRIVGRSPTQFREALPKLRRSA"
     gene            complement(3405..5189)
                     /gene="aspS"
                     /locus_tag="VIS53_02790"
     CDS             complement(3405..5189)
                     /gene="aspS"
                     /locus_tag="VIS53_02790"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEY5766745.1"
                     /translation="MTQNMFRTHDCNSLRKSDIGRQVTLAGWVNVTRDHGGVIFIDLR
                     DRQGLTQVVFRPEENAELAKQAHTLRGEDVIQVSGTVAARLPGTENPNLATGDIEIIP
                     SELRILNRAEPLPFPIDAEPQNEDLRMTHRYLDLRRPRLARNLRIRHRAAKATRDYLD
                     SQGFVEVETPILSKSTPEGARDFLVPSRITPGKFYALPQAPQQYKQLLMVAGVEKYFQ
                     IAKCFRDEDLRADRQPEFTQIDIEASFITPDDIFSVTEGMLAAVFKAARDVDIKTPFD
                     RLSYREALDRYGSDKPDRRFEMELVDLGENFRESSFKVFRGALDAGGVVKAINAKGFA
                     GITIGQADELTEIAKLHGAKGLAFIKVENGEWKSPIVKFFSDAEKTALRSKLKIEEGD
                     CLFFAADKWEIACEVLGRLRLRIAEMQKLMPAGETWNFLWVTDFPLFEWSPEENKWNA
                     MHHPFTRPKAEDVSLFDAKKFSEVRAEAYDVVLNGVEIGGGSMRIYEPELQDKMFAAL
                     GISPETRESQFGHLLRALRLGAPPHGGIAFGFDRLVMLICGEQGIRDVMAFPKNNRGI
                     DLMTQSPAGVDPRQLRDLSLELRKDKKL"
     gene            complement(5323..>5563)
                     /locus_tag="VIS53_02795"
     CDS             complement(5323..>5563)
                     /locus_tag="VIS53_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766746.1"
                     /translation="NLICYSHCMLNELREAVRKIPFEPFWIELNSGTEIPVPHSDHVW
                     VRERRAVVEDDKGTIHILSPLHIARIRSQQRESAA"
BASE COUNT         1252 a         1503 c         1499 g         1309 t
ORIGIN      
        1 cgcctgttcc cgccgaggaa ccctggttcg ccggcgttca tccattgaga tctggatcgg
       61 gggcgcgaca tcaccttcga acactttgac tccgaagtcg tttatcttag caaagccgga
      121 cagcagcccc atcccactct gatcttccag aggggtccag tcgatgaggt gatactctga
      181 cagctgggcc aaggcgcgca gccagtcacg gcgacttatg cctcctggcg gcaggaccgc
      241 ttgctcacct tggccgaacg gaatggaacc ttcgcttcga cgttcataga gaagctgcag
      301 caggcatcct ctgacgacag aatccttcat agactttgcc aatatgctct gcatcccgcg
      361 caccaacaac tcacctcaag ggtgcaagtc tgtacttgga aatgcggttc gcgcctaaat
      421 tccgaaagcg ttgaatagcc gttcagatcg gaaattgcga tcggctctgg gatactccaa
      481 ttccagtgaa gtcgccgtgc gttcgccttc gacgggggct gctcgctcaa cgtacacaag
      541 attagggtcg actctgacaa taagcggtga gcgcgaagca ccaggatggc tttaactcaa
      601 tccagaaagg taaatattat gaatacatta acaacatgga atccgcttag agagatggaa
      661 caagcgacac aaaatcgctt caatcctttc ttcctgggcg gctttccgaa tagaatgggc
      721 agtggcgaga tccacagcct ggcagtcgca gattggtcgc cggaggttga tatcagcgaa
      781 gatgatcgcg ggtatctgct caaagctgac ctgcctgaaa tgaagaagga tgacgttagg
      841 gtaactgtcg aagacggcat cctgtgcgtt tccggagaac gcaaaagcca gaaggaagat
      901 cagaaaaaga aattccatcg catcgagcga tcctttggta ctttccgacg cagcttcacg
      961 ctgcccgaag atgccgacag tacgaaagtc acggcggagt tccacgacgg agtgctgaaa
     1021 gtgcacctcc cgacaacgcc gatagcaaga tcaaaagcta tcgaagttaa agtgaaataa
     1081 tgcactaaca ctgatggcga gcgtgcggaa ggttccgcgc gttcgctcta gtgtaaacgt
     1141 tgcgccgcac cgcgcacact ttgagacttt accgaaccat tgacaatgtc tgacgaaatg
     1201 cactctgcgc tatgctgagc gtcgcagctt cggaagggct tcgcgaaatt gcgtgggaga
     1261 gcgacctacg attcgcttaa actcgcgatt gaaattcgtc atggattgaa atccgcatgc
     1321 gaaggcaact tcgctaactc gcgaattggg attgagcaaa agcgtcttcg atttctccac
     1381 tcgaactctc gagaggtaat cgacgaaatt catcccggtc gctttcttga acatcttgca
     1441 aaagtaatgc ctgctgatgt tagccacttg ggcgatccgc ccgagcgaca gcggctccgc
     1501 ttgatggtcc tcgataaatt gtcgcgctcg cgtcatattt gtggtctcat ccttttcgcg
     1561 ccgtacgacc agttgattcg acaagatcga aaggtgttgc gcaaaaagac tcaggagccg
     1621 caacatcgcg cggtaccgga taggcgataa aacgcacgac cgaaaatagg cccgctcaag
     1681 ttgcttccaa tccgtcttgt agccccacgc gcggagctgc cgagtaatgc tggcgaagtg
     1741 tttttttgtc ggattcttaa gcattacttc gcccgtctcg agaaaaccga gaatgtggtc
     1801 acccacatac actggcactg cgctttctga gagtcccgca aaccaagtag cggtgcgcgt
     1861 tgtcgaggtc ggttcctggg acgcatcggt ttgggccctt aggcatgcgg cgcgggcttg
     1921 gttgaaacga gccagaatcg ccgcgaatga atcgtgatct gttttgccat ggtgtgcagg
     1981 cgaccatgaa tggtgcgctc gaatattaag cggtaaaccc atcgcttcgc taaaagcccg
     2041 ttcgtaatct ttgaaaatct gagagcgcga cagatgtacc atcacttcct tatcagagga
     2101 tcgggctgaa cccgcttgcg tcattgcgcg cttcgaagtc gcagaaagcg cgcttcgtcc
     2161 acgggtgttg cggatcaggg cgcgtgtttt tgaacgtttc attggcgtca attatttttc
     2221 gacaccgggt tatcaacggg gaattgcagc ttcgacagtc ggagcgctgt ctcctctagc
     2281 gagactcttg ggctctgtta aaatacccgc agtcatctca aggcgctcgc aatctgagct
     2341 acgttagcag cccgcggcac gccgcatgcg attagggctt tggtcgtgtc ctttacactt
     2401 aggaggtact tgcgcacgat aggatgaatt gcatatgcga cttcagcatc tcgcattatt
     2461 tcgcggaatt ggattaggtg catgtgctgt caatcttggt agcggaatgc cttcaacgtg
     2521 ccttgcgccg gaccggttgt ggcgtcttcg tttcgatcat ctcggggtaa ctgttgaagt
     2581 tgccccgttt ttcccccttc gttttcccaa cgtcgctctg cggcagaatc gccttcttcc
     2641 ttctgtgaac ttgcgcaagt caagggatcc atgatcacaa tcaatgaagc ggctcagcac
     2701 ccgttgtccc gatgaagtcg tggtacgatg aataagtcgc cgaaggtcag ctgccgccga
     2761 acatccggcc tccgcaggcg ggccgcagcg cgaaacttcc tgaaaagcgc cgcacgacct
     2821 tttgaagttt tatgttgcgc gtagtagagc gcgcagttct gagtcaatgt tggttccatg
     2881 ttaattctgc gtttatttgc gctggtggcg gattgacgcg ggcgctgatg tctgagcaat
     2941 tggtgtcgag gcccgtgata taagcatcca gggacgcgac gaaagttatc cctgagacag
     3001 cagtgtcgcc cgataagttc tcgagcaatt ttttaagctc atctttatga gcagcgacag
     3061 gattcatgat gcggtcttgt gtgcagagag aaggggccgc acacctgcgc gatcgattga
     3121 cgctgcgatt gttacggaac tagcatacgg ctgcaactgc cgatcagcta atgtaattac
     3181 tgccaaagtt cgccacaccg cctcttccca gagtgacgaa gagcatattt cgggggtacg
     3241 gttggaattt ccccttgatc atcgggactt cgtaatggtg tgatgcatgc acgcgcctgt
     3301 ggcaagtgag attccgctag ccgcttatag taaaggtgcc tgtgccgtct tccgtttaag
     3361 ctgcggctga tactcggaat gtattcgcga agacgcagtc gccgctacag ctttttgtct
     3421 tttctcagct cgagcgatag gtctctcaac tgtcgaggat cgactcccgc aggcgactgc
     3481 gtcatgaggt cgatgccccg gttgttcttc gggaaagcca tcacgtcgcg aataccttgt
     3541 tcgccacaga tcagcataac cagacgatcg aagccgaacg cgattccgcc atgcggcggg
     3601 gcgccgagcc gaagcgcacg gagtagatgg ccgaactgtg attctcgagt ttccgggctg
     3661 attccaagcg ctgcgaacat tttgtcctgc agctccggtt cgtagattcg catgctgccg
     3721 ccgccgattt caacgccgtt taaaacgaca tcgtaagcct cggcgcgaac ctcggaaaat
     3781 ttcttcgcgt caaacagcga cacgtcctcg gctttggggc gagtgaatgg atgatgcatc
     3841 gcgttccatt tgttctcttc cggactccat tcgaaaagcg gaaagtccgt gacccaaagg
     3901 aaattccaag tttcgccagc aggcataagc ttttgcatct ctgcgatacg caggcgtaat
     3961 cgcccgagca cctcgcaggc gatctcccac ttgtcagcag cgaaaaaaag gcaatcgccc
     4021 tcttcgatct tcagctttga tcgcaatgcg gtcttctcgg cgtcactgaa gaacttcacg
     4081 atgggcgatt tccattcacc gttctcaacc ttgatgaagg cgagaccttt cgcgccatgt
     4141 agcttggcaa tttcagtaag ctcatcggcc tggccaatgg tgattccggc aaaacctttt
     4201 gcgttgattg ctttcacgac gccgccggca tcaagcgcac cgcgaaaaac cttgaaactg
     4261 ctttcacgaa aattctcacc aagatcgacc agctccattt caaatcggcg atcgggttta
     4321 tcgctgccgt aacgatcgag cgcttcgcga taactaagcc ggtcgaatgg cgttttaatg
     4381 tcaacatcgc gcgcggcctt gaaaaccgcc gcgagcattc cttcggtgac gctgaagatg
     4441 tcgtcgggcg tgatgaacga cgcttcaatg tcgatctgcg taaactccgg ttgccggtcc
     4501 gcacgcaaat cttcgtcgcg aaagcatttt gcgatctgaa aatatttttc cacgccagcg
     4561 accatgagca gctgtttgta ttgctgcggc gcctgcggca gagcgtaaaa ttttcccggc
     4621 gtgatgcggc tcggcaccag aaagtcacgc gcgccttccg gcgtgctctt ggacagaatc
     4681 ggcgtttcaa cctcgacgaa tccctggctg tcgaggtaat cgcgtgttgc ttttgcggcc
     4741 ctgtggcgaa tccgcaaatt gcgcgcgagc cgtggccgcc gcagatccaa ataacggtgc
     4801 gtcatccgca aatcttcatt ttgcggctcg gcatcgatag gaaatggcag cggctcagcg
     4861 cgattcaaaa tccgcagctc gctcggaatg atttcaatgt cgccagtcgc gagatttgga
     4921 ttttccgtac cgggcagacg tgcggcgacg gtacccgaaa cttgaatgac gtcttcgccg
     4981 cgcaacgtgt gcgcctgctt tgcaagctcg gcattttcct ctggacgaaa aaccacctgg
     5041 gtcagtccct ggcggtcgcg cagatcaatg aaaatcacgc cgccgtgatc gcgagtgacg
     5101 ttcacccatc cggcaagcgt gacctgcctg ccgatatcgc ttttgcgaag tgaattgcag
     5161 tcgtgtgtgc gaaacatgtt ttgtgtcatt gcaagcgaag tcgagcaacc ccattgcgaa
     5221 atccaagatt gagtcgcggg atccttcgac tgcgctgcgc ttcgctcagg atgacaaact
     5281 cgatagcgct tgcaagtgcg caagtaggcg ctgcgaaggt aatcacgccg cggattcgcg
     5341 ctgttgcgag cgaatgcgcg cgatgtgtag cggtgaaagg atgtgaatag tccctttgtc
     5401 gtcttcgact acggcacgcc gttctcgcac ccaaacgtga tccgaatgcg gcaccggaat
     5461 ctcagttccg ctgttgagct cgatccagaa aggttcaaac ggaattttgc gcaccgcctc
     5521 tcgaagctcg ttcagcatac aatgactata acagattaga ttc
//
LOCUS       DATDAJ010000121         2513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_775027, whole genome shotgun sequence.
ACCESSION   DATDAJ010000121 DATDAJ010000000
VERSION     DATDAJ010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775027"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /gene="pilM"
                     /locus_tag="VIS53_02800"
     CDS             complement(<1..813)
                     /gene="pilM"
                     /locus_tag="VIS53_02800"
                     /inference="COORDINATES: protein motif:HMM:NF022554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEY5766747.1"
                     /translation="MPAPSRLISLNLGSQTFGLAEFRVAHGGLTLVDYRLREVPIDPE
                     TGHRRDAHVALEEAAAVLREMMHEMQITRRAVNYALPAQSVFARFVKLPPLGQEKLDK
                     IISFEAQQNVPFPLDEVVWDYQIVGGGMGEEIQVVLVAIKVDLLDEINADVEGTGLQT
                     SIVDIAPMALYNAFRYSYPKVGDCSLLLDIGARTTNILFIESGRVFLRSIPLGGSTIT
                     AAMAREFNESFAAAEIRKKRDGFVGLGGAYAEPADPNVARVSKIARSTMTRLH"
     gene            1238..1639
                     /locus_tag="VIS53_02805"
     CDS             1238..1639
                     /locus_tag="VIS53_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766748.1"
                     /translation="MIKISFLPYDVIRSLMETFPISDNFAHRFVTREREHRVDVIRHH
                     QKELDMPSQFRFIESCRIQNPLSKRGLNQRPLLFLTIESDADVKLRARLYPVRHPMMQ
                     ALREAAINLQRLSRYAATPQLCQEILAPVGE"
     gene            complement(1815..2312)
                     /locus_tag="VIS53_02810"
     CDS             complement(1815..2312)
                     /locus_tag="VIS53_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766749.1"
                     /translation="MMPLDAVSDLSIYRHNVVNASNSILFHNGPVRAWSDGAQLVSES
                     AFVQIGMAPLGLFPVTYLAPSDIGARSIRKPSAASNSPSQMVATDGKDLPGEMISSPL
                     NQVYYTGEVGVVYGRWSGKSSGDYVGSYVWGEVGNDKFQITAGASFENWSDNSPKIRA
                     YPYSR"
BASE COUNT          591 a          723 c          641 g          558 t
ORIGIN      
        1 atggagccgg gtcatggtgc tgcgcgcgat tttcgagacc cgcgcaacat taggatcggc
       61 aggttcggca taagcgccgc ccagcccgac aaagccatcc cgtttcttgc gaatttccgc
      121 cgcggcaaat gattcgttga attccctcgc catcgcggcg gtgatcgtgc tgccgcccag
      181 cggaatgctc cgcaaaaaaa ctcttcctga ttcaatgaaa agaatgttcg tggtgcgcgc
      241 accgatatcc agcagcagcg aacaatcgcc gactttgggg tagctgtagc gaaaggcgtt
      301 gtagagcgcc atcggcgcaa tgtcgacaat ggacgtttgt agtcctgtcc cttccacatc
      361 tgcattgatt tcgtcgagca aatcaacttt gatcgcgact aggacgacct gaatttcttc
      421 gcccattccg ccgccgacga tctggtagtc ccagaccact tcgtctaaag gaaacggaac
      481 attttgctgc gcttcgaacg agataatttt gtccagtttt tcctgtccca gcggcggcaa
      541 tttcacaaac cgggcgaaca cggattgcgc gggcaaagca taattgactg cgcgacgagt
      601 aatttgcatt tcgtgcatca tctcgcgtaa caccgcggcg gcctcctcca acgcaacatg
      661 tgcgtcgcga cggtgcccgg tctctggatc gataggcact tcgcgcaggc gataatccac
      721 cagcgtcaaa ccgccgtggg cgactcggaa ttcggccaga ccgaacgttt gagatccgag
      781 gttaagactg atcaggcgcg atggtgcagg catcggctta aaggtctaaa tcgcaattcc
      841 aaaatgccca agcaaatttc acgtggtgaa atgcaatgtg gtggaacgcg ttgtcctcaa
      901 cgcgttggct tagaatgcgg ctctgccgcc atatatctgc gcccaccctg cttgcctcca
      961 ggtggaacgc gttgtcctcc gtaaaggagc gtggctccca cggagcttta cgctcaacgc
     1021 gttgactaat cattgtggct ttgccgcctg atatttgcgc cttcggcgaa tcaaatccca
     1081 tcgtcttgag gacaagccga tccacctttg cgcacgatag gatcaattag ccaaggccag
     1141 tctttgcttt ggcgcataga ccagcagcta cggggttctg ccgaaagtaa tttagttttg
     1201 ctgaaagctg agcgccgcgt tcgtcaagcc gcaggcgatg atcaaaatat ccttcctgcc
     1261 atatgacgtg attcgttcgc ttatggaaac gtttccaatc tcagacaact tcgctcatcg
     1321 attcgtcacg cgcgaaagag agcaccgcgt ggacgtgatc cggcatcacc agaaagagct
     1381 tgatatgcca tcgcaatttc gcttcataga atcttgccga atccaaaatc ccttgagcaa
     1441 gcgagggctc aatcaacggc ctttgctgtt tctgacgatc gagtctgatg cggacgtgaa
     1501 actgcgcgcc aggctctacc cagtgcggca cccgatgatg caagcgctcc gggaagccgc
     1561 gataaatctt caacgtttgt cacgctacgc agcgaccccg caactgtgcc aggaaattct
     1621 tgcgcctgtc ggcgaataaa accccatcgt cttgaggaca agtcgatcca cctctgaagg
     1681 tggaacgcgt tatcctcaac gccttggcta gaccaggcgg cagtgcagtc aaacatctgc
     1741 gcttccgcga atcagctgac atcgtcttga ggacaagacg atccaccttg ttgctgcttc
     1801 ggggctggcc acacctatct cgaataagga tacgcgcgaa ttttcggtga gttgtcgctc
     1861 caattctcga acgaagcgcc ggctgtgatc tgaaatttgt cgttgccgac ctcgccccaa
     1921 acgtaactcc ccacgtaatc gccgctgctc ttgccgctcc atcgtccgta aacgactccg
     1981 acttctccgg tgtaatagac ttgattcaac ggcgaactga tcatctcacc cggcaaatct
     2041 tttccatccg tcgcaaccat ttgcgatgga gaattggaag cggcgcttgg ctttctgatg
     2101 gacctggccc cgatatcact cggagccaaa tatgtcactg gaaataaccc gagcggcgcc
     2161 attccaattt gcacgaatgc actttcgctt accaactgcg cgccatcgga ccatgcgcga
     2221 accggcccgt tgtgaaatag aatggaattc gaagcattca caacgttgtg acgatagatg
     2281 ctgagatcag aaaccgcatc gagcggcatc acagcggacc cagcgactcg atgttgcgtt
     2341 gcttcggaat gtttggcctg ctgcgctacg acgggaaagc aaacgccaaa gaacccgagc
     2401 gccagaaaga gcgcagcctt aaacatgcgg aagtcaaaac caaatcgccg caaacgccag
     2461 cagaatcttt gcgcgaaccc aagccattaa ccattgtcat gttgagcgga gcg
//
LOCUS       DATDAJ010000122         3758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_775652, whole genome shotgun sequence.
ACCESSION   DATDAJ010000122 DATDAJ010000000
VERSION     DATDAJ010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3758
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_775652"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..941
                     /locus_tag="VIS53_02815"
     CDS             9..941
                     /locus_tag="VIS53_02815"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004160.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEY5766750.1"
                     /translation="MMQILRSIPELSQLSSPLFLAIGVFDGVHLGHQAVISTSAEHAR
                     AVNGTPVVVTFDPHPEKILRPDKAPHLLTATPHKIALIRALGVRHLLIISFDKHFAAT
                     EPEDFVQQLVQHSKPLREICVGHEWSFGRNRRGNLQFLEKLGAQFDFNVVGIPPVTAN
                     GEIVSSTTIRRAVEGGDFKKAATMLGREYTILGTVVHGDDLGKKIGFPTANLSAHSEQ
                     FPPNGVYFAEARLDGVVYPGVVNLGYRPTVSSGRSDRILEVYLLEFDRDIYGKDLELR
                     FVRYLRPEKKFENVDALVLQIERDVRQARELAGV"
     gene            complement(955..1305)
                     /locus_tag="VIS53_02820"
     CDS             complement(955..1305)
                     /locus_tag="VIS53_02820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766751.1"
                     /translation="MIDDETLDRQLREAVPYINDDGFTARVIAGLPAARREPQWLRAM
                     IVVGLALIGTGMAYFLSGGGSLVRQGMVQMADFPIWLLLVFAFGCGLVVGAFAVIFAI
                     RKTPEVRDLTRLDF"
     gene            complement(1319..1855)
                     /locus_tag="VIS53_02825"
     CDS             complement(1319..1855)
                     /locus_tag="VIS53_02825"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5766752.1"
                     /translation="MELTDADLVARVLADDDQHAFGELVRRHQSSVRGLLRQLTRTDI
                     ALADDLAQEAFLRAYKNIRSFRGEARFSTWLYRIAYNCFREDARRRKELVGVDEEQWQ
                     AEQDPHTVDPGLRHDLMHALNLLPLHERTAIVLCCQNGLSHDEASRVLDIPLGTVKTN
                     VLRGREKLKRTLAAWGPN"
     gene            complement(1866..2567)
                     /locus_tag="VIS53_02830"
     CDS             complement(1866..2567)
                     /locus_tag="VIS53_02830"
                     /inference="COORDINATES: protein motif:HMM:NF039701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6249 domain-containing protein"
                     /protein_id="HEY5766753.1"
                     /translation="MKKLFLLCMVSLGLYGSLFPQSPTETPIASPTAPTAATAATAAT
                     AATSIAAPASTAVPSATSSSASSDLADKIHRKLEKKLGHKHGITIDTGDKDDDADLEQ
                     MRNLVAIPIVAIVFLSIFGAPVAIVVMIGIFSMIATRMRQRTIRMMVEKGQPVPAELL
                     APATRGIRRRSDARRGVIWTMVGLGLMIWLAAVNDWEGGAWSFGLIPFLIGLGYLIVW
                     KLENKKDIPPPPPAP"
     gene            2689..2764
                     /locus_tag="VIS53_02835"
     tRNA            2689..2764
                     /locus_tag="VIS53_02835"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2722..2724,aa:Gly,seq:gcc)
     gene            3129..>3758
                     /locus_tag="VIS53_02840"
     CDS             3129..>3758
                     /locus_tag="VIS53_02840"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEY5766754.1"
                     /translation="MFFWRKFAELRWVKAHEDLLQTHASGQLVIVRRPGRKRLELEIV
                     CRSRSVSSALLKVFGGRIEALRRNWLERFARVDSKPIKIGNRLVVSNVGETLVSRLSR
                     RSHIIIPASLAFGTGEHATTAMSLRFLEQLTRRWNPGWSLADLGTGSGILALGAKCFG
                     AGQVIGIDNDPAAISVAKSNARLNKIRGASFQLADVHKWSPAQQIDVITA"
BASE COUNT          813 a         1053 c         1042 g          850 t
ORIGIN      
        1 agtgagttat gatgcaaatc ctccgttcga ttccggagct ctcgcagtta tcaagtccgc
       61 tctttctcgc tatcggtgtc ttcgacggcg tccatctcgg gcatcaggca gtcatttcga
      121 cttctgcgga acacgctcgg gcggtgaatg gcacgcctgt tgtagtcacc tttgatccgc
      181 acccggaaaa aatactgcgg cctgacaaag cgccgcattt gcttaccgct acaccgcaca
      241 agatcgctct gattcgcgcg cttggcgtgc gacatcttct gatcatttca ttcgataaac
      301 attttgccgc cactgaaccc gaggatttcg tgcagcaatt ggtccagcat tcgaaaccgc
      361 tgcgtgaaat ttgcgtcgga cacgaatggt cgtttggaag aaatcgccgt ggcaatctcc
      421 agttccttga aaaactcggt gcgcagtttg atttcaacgt cgtgggaatt ccgccggtga
      481 ctgctaatgg cgaaattgtg agcagcacga ccatccggcg cgctgtggaa ggtggcgatt
      541 ttaaaaaagc ggcgaccatg cttggccgcg aatacacgat cctgggaact gttgtgcatg
      601 gtgatgatct gggaaagaaa atcggatttc cgaccgcgaa cctgagtgcc cacagcgagc
      661 aatttccgcc gaacggcgtt tatttcgccg aagcaaggct agacggcgtt gtctatcccg
      721 gcgtggtgaa tctcggttat cggcccacgg tgagcagcgg gagatcggac cgcattctcg
      781 aggtttacct gctcgagttc gatcgcgaca tttacggcaa agatctcgag ctgcgcttcg
      841 tccgttatct caggccggag aagaaattcg agaacgttga tgcgctcgtt ctgcagatcg
      901 agcgcgatgt gcggcaggcg cgcgaattgg ccggggtgta atcaacttgg cgcttcaaaa
      961 atccagccgg gtcagatcgc gtacttcagg agtcttgcgg atcgcgaaga tgacagcgaa
     1021 cgcgcctacc acgaggccgc acccaaacgc gaacaccagc aacagccaaa tcgggaagtc
     1081 cgccatctgg accatgcctt gccgaaccaa actgccgcca ccggaaagga agtaagccat
     1141 cccggttccg attaacgcca ggccaacgac aatcattgca cgcagccatt gcggctcacg
     1201 ccgtgctgcc ggcagcccgg ctataacgcg cgcggtgaat ccgtcgtcgt taatgtaggg
     1261 cactgcttcg cgcagttgtc ggtctagcgt ctcgtcgtcg atcattggat tcaccttatc
     1321 aattcggccc ccacgccgcc agtgttcgtt tcagtttttc gcggcctcgc aaaacgttcg
     1381 ttttgaccgt gccgagggga atgtcaagga cacgcgaggc ttcatcgtgc gacagaccgt
     1441 tctggcagca aagtacaatc gcagtgcgct catgtaacgg aagcaaatta agcgcgtgca
     1501 taagatcgtg tctcaaaccg ggatcgacag tgtgcggatc ctgttctgcc tgccattgct
     1561 cctcatccac gcccaccaac tccttgcgac gccgcgcgtc ctcgcgaaag caattgtacg
     1621 cgattcgata aagccatgtg gaaaaccgcg cttcaccgcg aaagctgcgg atgtttttgt
     1681 aggcccggag aaaagcttcc tgcgcaaggt catctgccag agcaatgtct gtgcgggtga
     1741 gttgtcgcag cagaccgcgc acgctcgatt gatgccgccg cacgagttcg ccgaaggcgt
     1801 gctgatcgtc atcggcaaga actcgcgcaa cgaggtccgc atcagtaagc tccacggccg
     1861 caatattacg gtgccggggg cggaggcgga atgtcctttt tgttttccaa tttccataca
     1921 atcaaatacc caagcccgat caggaacgga atcagtccaa acgaccacgc gccgccttcc
     1981 caatcgttca cggctgcgag ccatatcatc agaccgaggc ctaccatggt ccaaatgacc
     2041 ccgcgccgcg catctgagcg ccggcgtatg cctcgtgtag caggcgccaa gagttctgcg
     2101 gggacgggct gccctttctc taccatcatc cggatcgtcc gctgccgcat ccgagttgcg
     2161 atcattgaaa atatcccaat cataaccacg atcgccaccg gcgcgccgaa tatggacagg
     2221 aacacgatcg ccacgattgg aatcgccact aaattgcgca tctgttcgag atcggcgtca
     2281 tcatccttat cgccggtgtc aatggtgatt ccatgcttgt gcccaagctt tttctccagc
     2341 ttccggtgaa ttttgtcagc gagatcggat gaagcggaac tagacgtcgc actaggtact
     2401 gccgttgatg ctggtgccgc tattgaggtt gccgctgtcg cggctgtcgc ggctgttgct
     2461 gccgtcggtg ctgttgggct ggcaatcgga gtttcggttg gactttgcgg aaacaagctg
     2521 ccatacagcc cgagcgagac catgcagagg aggaatagtt ttttcataga gtgtttaatc
     2581 ataggatgaa gtgaacgcct aatttggatt caacgatttt gccccttcca ggacaattaa
     2641 aaggttgcgt ggcgcggttg actggacatt attgtccctc tcaaaactgc gggtgtagct
     2701 cagttggtag agcaccacct tgccaaggtg gacgtcgcga gttcgagcct cgtcacccgc
     2761 tccagccttc gcttggagcg gagcgcaaat cgaaggctgg agcgagcgcg ccgtagcctt
     2821 ggcgaaggtc ggccgcccaa aacgctccaa gctacggctg gcaggccagc cttgtgatgt
     2881 aatacgtcta cttgttgaag tcccgctctc gcccaacaca accatatatc ggttcgactt
     2941 gcgatctgcg acagcgcctc aaacaacata atgaagggtc gctctccaca tacagcgaag
     3001 ttccgacctt ggacgctctt ggcctatgtt gcttttgcgg acgaaagcgc ggccgtcgca
     3061 tttgaaagat atctcaaatc gggttcggga cgtgcgttca tcaagcggca ctttctctag
     3121 cgtcatcgat gtttttctgg cgaaaatttg cggaactccg ctgggtcaaa gcgcatgaag
     3181 acctccttca aacgcatgct tctggccagc tcgtaatcgt acgcaggccg gggcgtaagc
     3241 gtctggaact ggaaattgta tgccgctctc ggagcgtttc gtctgccctg ctcaaggtat
     3301 ttggcggccg aatcgaggcc ttgcggcgca actggttgga gcgatttgcg cgtgtcgatt
     3361 cgaagccaat caagatcggg aatcgattgg tggtttcgaa tgtaggagag actttagtgt
     3421 cccgactatc gcggcgctcc cacattatca ttccagcttc gttggcattt ggaactggcg
     3481 agcacgccac gacggcaatg tcgcttcgtt ttttggaaca actgacccgc cgctggaacc
     3541 ccggctggtc gctcgccgat ctcgggactg gcagcggaat tcttgctttg ggggcaaaat
     3601 gtttcggtgc cggccaagtc ataggtatcg ataacgatcc cgcggcgatt tccgtggcta
     3661 aatcaaacgc ccgattgaac aaaattcgcg gcgccagttt tcaattagcc gatgtgcaca
     3721 aatggagccc ggcacagcag atcgatgtga ttacggca
//
LOCUS       DATDAJ010000123         2452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_781996, whole genome shotgun sequence.
ACCESSION   DATDAJ010000123 DATDAJ010000000
VERSION     DATDAJ010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_781996"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..629)
                     /locus_tag="VIS53_02845"
     CDS             complement(<1..629)
                     /locus_tag="VIS53_02845"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766755.1"
                     /translation="MNHTTQVRTVEAWDNEGGLGPPGAVWLENEQAWNFTLYSRHARG
                     VTLLLYGATDFVEPMFQLQLNPLKNKTARVWHCLVPQQLAPAARYYAYRVQGPWNPAV
                     GHRFDADKVLFDPYAEELFFPPEFSREAARHPGRNDGRAILGVLPRTEQPFDWGGAPP
                     LRHTHDAVVYELHVKGFSARANSGVPNDKRGTFLGLIEKIPYLQELGITV"
     gene            complement(901..1347)
                     /locus_tag="VIS53_02850"
     CDS             complement(901..1347)
                     /locus_tag="VIS53_02850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766756.1"
                     /translation="MDTAIVTAMAGVLGSLVGGSASVAATWVTQRTLSKRELIRTEIR
                     RRESLYGEFISECSARIIDSFERTLEKPETLLHAYALLNRIRLCASDAVLAQGEATLR
                     FITEQYFSPNLSVDEMRKLVRKWTTDPLEPFGEACRVELKSIRAAV"
     gene            complement(1405..1587)
                     /locus_tag="VIS53_02855"
     CDS             complement(1405..1587)
                     /locus_tag="VIS53_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766757.1"
                     /translation="MKKVLLTIVEPTTATLLIAFGIGLGVAVHPVFFLAALLIAIAAF
                     IQSLVNTAGHLTHRHS"
     gene            complement(1686..>2452)
                     /locus_tag="VIS53_02860"
     CDS             complement(1686..>2452)
                     /locus_tag="VIS53_02860"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEY5766758.1"
                     /translation="ESGFSMIEVCSTPEHLNFHDLKSVHRAAEQIRDLGMEAYSFHAP
                     FAPKIDIASTDDAQRTESVAEIFKAAEAAAVLQVHYFVMHPGPENPATIPASEQLPRM
                     QHVVESLNQVARRCKELGIMCVLENKLPHLLFGNTSDILWILDGINSAEVGACFDTGH
                     AYLGGDIHNLVHKLAGHLRIIHAHDNGGAEDNHWPPGDGKIEWEKFMRDLIEVGFRGA
                     FILEMAGNNDPAVTMTNARRGRSYLRDVGRRLALAK"
BASE COUNT          538 a          708 c          643 g          563 t
ORIGIN      
        1 acggtgattc ccagttcctg caaataagga atcttctcga ttaaccccag aaatgtgccg
       61 cgcttgtcgt taggcacccc ggaattcgct cgcgcgctga atcctttgac atgtagctca
      121 tagacaactg cgtcatgcgt atgtcgcagc ggcggtgctc cgccccaatc gaacggctgc
      181 tcggtgcgcg gtaatactcc caagatcgca cggccatcgt tgcgacccgg gtgcctggcc
      241 gcttcgcgcg aaaactccgg cggaaaaaac aattcttccg catagggatc gaacaagacc
      301 ttgtccgcat cgaagcgatg tcccaccgca gggttccatg gaccctgcac tcgataggcg
      361 tagtatctcg ccgcaggcgc caactgctgc ggcacaagac aatgccagac acgcgcggtc
      421 ttattcttca acggattgag ttgcagctga aacatcggct caacgaaatc cgtcgcgcca
      481 tacaacagca aagtcacgcc cctcgcatgc cgcgagtaca aagtgaagtt ccatgcctgc
      541 tcgttttcca gccaaaccgc gccgggcggt ccgaggccgc cttcgttatc ccacgcttcc
      601 accgtgcgga cctgcgtagt gtggttcact tcggtgcttg ttcggtcgcg gcgcccaacg
      661 tatcgccgcc aaaaataccg aggccgccgc tgtatgttgg catcgctgga tcaaggacga
      721 tttccatcca ggaaacaggc gattcgtttg tcaggcaggt tcatagcttg cagttccagt
      781 gcgcttcaaa ttcaaccatt ccggtgttcg tcgccgctgc gcaatgcttg cgaaacattg
      841 accgtttcgt gcccaaaatt tcatttttag gttccgctgc aggaagcaaa tggtgcacgg
      901 ctacacggct gcgcggatcg atttaagttc gacacggcac gcttcgccga atggctcgag
      961 cgggtcagtg gtccatttcc gaacgagttt acgcatttcg tcgaccgaaa gattgggaga
     1021 gaagtattgt tcggtaatga agcgcagcgt ggcttctccc tgcgccagga ctgcgtccga
     1081 ggcgcaaagg cgaatgcggt tcagcagagc ataggcgtgc aacaatgtct ccggtttttc
     1141 caacgtgcgc tcgaacgagt caatgatccg tgccgagcat tcgctgatga actcgccgta
     1201 aagactttcg cgccggcgga tctcggtccg gatcaattcc cgcttgctaa gagttcgctg
     1261 cgttacccag gtcgccgcta ccgaggcaga gccaccgacg agcgatccga ggacgccggc
     1321 cattgcagtc acaatcgcgg tatccatcag ttaccaaggc taacctttcc ggttccaatt
     1381 gcgaatgtcg aatcttcatc ggtttcacga atgtcgatgc gtcagatggc cagctgtgtt
     1441 aaccaggctt tgaatgaatg cagcgatcgc tatcagcaat gccgcgagaa aaaacactgg
     1501 atgcaccgct acaccgagac caattccgaa agcaatcagc aaagtggcag tcgttggttc
     1561 tacaattgtg agcagcactt ttttcataac gcctcctttt ctcgatttag catagagttg
     1621 gcatagtcct cggcgataat cgccgcttgg ctttaactgc gcaaaaattg cgaagcttcc
     1681 cagcttcact tcgcgagcgc caagcgtctt cccacgtcgc gcaaatagct tcgcccgcgc
     1741 cgcgcattgg tcatcgtaac ggccggatca ttgttgccag ccatttccag aatgaatgcg
     1801 ccgcggaacc ctacttcgat tagatcgcgc atgaattttt cccactcaat ttttccatct
     1861 ccggggggcc agtgattatc ttcggcaccg ccattatcat gggcgtgaat gattcggaga
     1921 tgaccggcga gtttatgcac gaggttgtga atgtcgcctc cgagataagc atgacccgtg
     1981 tcgaagcagg cgccgacctc cgctgaatta attccgtcca ggatccacaa aatatcactc
     2041 gtgttcccga aaagcagatg cggtaattta ttttccagaa cgcacatgat gccgagttct
     2101 ttacagcgcc gggcaacctg attcagcgat tcgacgacgt gttgcatccg tggcaactgc
     2161 tctgatgccg ggatcgtcgc cggattttcg ggtcccgggt gcattacaaa atagtgcact
     2221 tgtaaaaccg cagccgcttc cgctgctttg aagatttctg caacagattc agtccgctgt
     2281 gcgtcgtcgg tagacgcgat atcgatcttc ggcgcgaacg gcgcgtgaaa cgaataagcc
     2341 tccatgccga ggtctctgat ttgctccgcc gcgcgatgta ccgatttgag gtcgtggaaa
     2401 ttaagatgct ccggcgtgga gcagacctcg atcatgctga aaccgctctc cc
//
LOCUS       DATDAJ010000124         3932 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_788812, whole genome shotgun sequence.
ACCESSION   DATDAJ010000124 DATDAJ010000000
VERSION     DATDAJ010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3932
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_788812"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VIS53_02865"
     CDS             <1..284
                     /locus_tag="VIS53_02865"
                     /inference="COORDINATES: protein motif:HMM:NF015686.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766759.1"
                     /translation="ISQDPFIVYTSNICAILGLRSLYFLLAGLMNRFVYLRTGLALVL
                     GFVGLKMITAEFLPFPRVISLGIIVLILGVTIWLSMLKTKNEAAREHAK"
     gene            331..750
                     /locus_tag="VIS53_02870"
     CDS             331..750
                     /locus_tag="VIS53_02870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosortase system-associated protein, TIGR04073
                     family"
                     /protein_id="HEY5766760.1"
                     /translation="MKTMLASAAIVSLATVAFADIQDPPGNDYGPTRKLGRGISNFII
                     APTEFFTTVNQINQTEGNSAGAGYGVWKGAGRTAARHVAGLIEILTFPFPIWRDSYQP
                     LLPSDIPYIHGGYAEFPPEVGNESKYPYVRDTHHDFN"
     gene            934..3009
                     /locus_tag="VIS53_02875"
     CDS             934..3009
                     /locus_tag="VIS53_02875"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HEY5766761.1"
                     /translation="MTRIGVSVKVTEIKAVGIMQSGRFAGLPLIGVFAIIYLIAGKIG
                     LNLASLHASASPVWPPAGIALAGILLLGYRAWPAIFVGAFLVNLTTAGNIVTSVAIAS
                     GNTLEAIAGAWLVNRFAGGKNVFDRPQGVFKFALAAAISAVLSPAFGVTSLALDGFAD
                     WTKYGAIWVTWWLGDVTGDLIFTPVVLLWGIRWKLVWNKKEAVEVGVLLLLLTLLSAV
                     VFGGWLEISAKNYPIAFICGPIVIWTAFRFTQRETATGIFILCVLAVWGTVRGFGPFA
                     GQSENQSLLTVQSWTAVLAITAMALSAGMAERRRIEQKLHQQKSIVQAANRTKDHFLA
                     MLSHELRTPLTPVISALDSLETEPSQTQDTKASLAMIRRNIELETQLIDDLLDFTRIA
                     RDKMQLRFAPVDAHQAVSNVVEICRAEARSKKLNVHLNLRAKTHHLTADTAKFQQIIW
                     NLLKNAIKFTPEGGDITISSDNPLEAVFTVSIRDTGIGMEPEVMQRIFDPFEQGNRSF
                     EHRFGGLGLGLAISKSLAQAHGGTLTAQSDGPNRGSTFTLSMQALPQGESASVASKAV
                     TDSARQALKILLVDDHHDTCAALEKLLARRGHLVAVSHNVRSAMEAAVRNKFDLLISD
                     IALPDGTGMDLMMQLRAIANVPGIAISGFGNNGDIERSLQAGFSEHLIKPIKLDKLEA
                     AIERALGAT"
     gene            3196..>3932
                     /locus_tag="VIS53_02880"
     CDS             3196..>3932
                     /locus_tag="VIS53_02880"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HEY5766762.1"
                     /translation="MRVVDLKIEDIAFGGKGVAREQGKAVFVPYTIEGELVSAEIVRE
                     KKQFAEADLVEVKQSSPNRVTPECPYFGRCGGCAYQHIDYQHQLAIKWRQVRDALQRI
                     GKLKDIPMRPIIPSPRQYAYRNRITVHAQDGVIGFFRRDSHRLIDIECCPISREQVNR
                     ALAELREQKHVRDGHYTLRSASEPRVFSQVNDEVAQALRHLIVDLVPPNQDLLIDAYC
                     GAGFFAKALLDKFERVIGIDWDRFAITT"
BASE COUNT          865 a         1066 c         1067 g          934 t
ORIGIN      
        1 cgatcagtca agatccattc attgtgtata cgtcgaacat ctgcgcgatc cttggcttgc
       61 gatcgcttta cttcctgctg gcgggtctga tgaaccgttt cgtttatctt agaaccggac
      121 tggcgttggt gctcggattc gtgggcctca aaatgattac cgcagaattt ctgccgtttc
      181 cccgagtgat ctcgctggga atcattgtgc ttattctggg agtcactatc tggctttcca
      241 tgttgaaaac gaaaaacgag gctgcgcgcg aacacgcaaa ataaagcatt gcctttgctg
      301 tttggaatca tttaactgct aacgaccctt atgaaaacta tgcttgcctc cgctgcgatc
      361 gttagccttg ccaccgtagc gttcgctgat attcaagacc cgcccggaaa cgattatggt
      421 ccaacgcgca aactcggtcg cggtatctcg aacttcatca tcgccccgac tgagttcttt
      481 accactgtta accaaatcaa ccaaaccgaa ggtaattccg ctggagccgg ctatggcgtt
      541 tggaagggag cgggacgcac agcggcgcgc cacgtggccg gcctcattga gatcctgacc
      601 tttccgtttc caatttggcg agacagctat cagcctttgc tgccctcaga cattccttac
      661 atccatggcg gttacgcgga attcccgccc gaagtcggta acgagtcgaa atacccgtac
      721 gtgcgcgata cgcaccacga tttcaactag cgcccgcttt tgccgaacgt tggtgtgctg
      781 tttggatgat ttaagcgact cttgcgtgcg tcggctcgca ggtcagcacg atcgcagctg
      841 agtcatcagc tccaaaatct cttcgcggat cgcgaaaagc tcgttccggt agagtagtgc
      901 agccgtgccg caaagtgcgc acgaatcaat gcgttgaccc gcattggcgt cagcgtcaaa
      961 gtgaccgaga ttaaggcggt tgggataatg caatcgggac gttttgccgg gctgccgctc
     1021 atcggcgtat tcgcaatcat ttacctcatc gccggcaaaa tcggtttaaa cctggcatca
     1081 ttgcacgcga gtgcatcgcc ggtgtggccg ccggcgggaa tcgcgctggc aggaatactc
     1141 ttgctcggct atcgagcgtg gccagcgatt tttgttggtg cgttcctggt aaacctaacg
     1201 accgcgggaa acatcgtcac atcagttgcc atcgcgagcg gcaacacact tgaggccata
     1261 gcgggcgcgt ggctggtgaa ccgcttcgcg ggcggcaaga acgtttttga tcggccacag
     1321 ggcgttttca aattcgctct cgccgcagcg atcagcgctg tcctgagccc agcgttcggc
     1381 gtgaccagcc ttgcgctgga cggctttgcc gactggacaa aatacggcgc gatttgggtt
     1441 acgtggtggc tcggcgatgt gactggcgat cttattttca ctccagtggt tcttctttgg
     1501 ggcattaggt ggaaattagt ctggaacaaa aaggaagcgg tagaagttgg cgtcctcctt
     1561 ctgttgctaa cgttattgag tgcagttgtc tttggcggtt ggcttgagat ctctgcgaaa
     1621 aattatccca tcgcgttcat ttgtggaccg attgtgattt ggacagcttt ccgctttact
     1681 caacgcgaaa ctgccacagg tattttcatt ctgtgcgtat tagcggtgtg gggaacagtg
     1741 cgcggctttg ggccatttgc tggtcaaagt gagaatcagt cgctgctcac tgtgcaatcg
     1801 tggacagcag tgctcgccat cacggcaatg gcgctttccg ctggcatggc tgagcgacgg
     1861 cgtatcgagc aaaagcttca ccagcaaaaa agcatcgtcc aagcggcgaa tcgcaccaaa
     1921 gaccattttc tggcgatgct ttcgcatgaa ctgcgcacgc cacttactcc ggtcatttct
     1981 gcgctggact cgctcgaaac agagccgtca caaactcaag atactaaagc atcgctggcg
     2041 atgatccgtc gcaatatcga attggaaacg cagttgattg atgacctgct cgacttcacc
     2101 cgaattgcca gagacaaaat gcaattgcgt ttcgctccgg tcgatgcgca ccaggcggtg
     2161 tcgaacgtcg tcgagatttg tcgcgccgag gcgagatcca aaaaacttaa tgtgcatctc
     2221 aatttgagag cgaagactca ccatttgact gccgacaccg cgaaatttca gcagatcatt
     2281 tggaacttgc tcaagaacgc catcaaattc acccctgaag gaggagacat cacaatttcc
     2341 tcagacaatc cattggaagc agttttcacc gttagcatcc gcgacaccgg catcggcatg
     2401 gagcctgaag ttatgcagcg catttttgat cctttcgaac agggcaaccg ctcttttgag
     2461 caccgttttg gcgggctcgg cctgggtctt gccatttcaa aatctctcgc gcaggcccat
     2521 ggcggcacgc tgactgcaca aagcgacgga cccaatcgcg gctcaacctt tacgttatcg
     2581 atgcaagctc tcccgcaggg tgaatcagcc agcgtcgctt caaaagcggt tactgattct
     2641 gcacgacaag ctctgaagat tcttctggtc gacgatcatc acgacacctg cgctgcactg
     2701 gagaaattgc tggcgcgtcg cgggcatctc gttgcggtgt cgcacaacgt ccgctcggcc
     2761 atggaggctg ccgttcgcaa caaattcgat ctgctcatca gcgatattgc ccttccggat
     2821 ggaactggaa tggatctgat gatgcaattg cgcgcgatcg ccaatgttcc agggattgcg
     2881 atcagcggct ttggcaataa cggcgatatc gaacgaagtt tgcaggccgg cttctccgag
     2941 catctcatca aacccatcaa gctcgacaag ctagaggccg ccatcgaacg cgcgcttggc
     3001 gcgacgtgac acttccgtcg cccagttaca gccatgtttt tggcgagcct cttcttaaca
     3061 ccgcgcttta gcgcgatgct cagcgcgcgt gccggatgta accgcttcag cggtttctct
     3121 cagcgtgaaa actgctaaag caatttaata tctgtgtcgt tgtcggacac acccagctga
     3181 agaggtgtta aagatatgcg cgttgtcgat ctgaaaatcg aagacattgc ttttggcggc
     3241 aaaggcgtgg cgcgggagca aggcaaagcc gtttttgttc cttacaccat tgagggcgaa
     3301 ctagtttccg ccgaaatcgt ccgggaaaag aagcagttcg ccgaagcaga tctggtcgaa
     3361 gttaagcaaa gttcgccgaa ccgtgtcacg ccagagtgcc cgtatttcgg ccgatgcggc
     3421 ggctgcgcct atcagcacat cgattaccaa catcagcttg cgattaagtg gcgacaggtg
     3481 cgcgacgcgc tccagagaat cggcaaactg aaggatattc ccatgcggcc gattatcccg
     3541 tcgccgaggc agtacgcata tcgcaaccgc atcaccgtgc acgcgcaaga cggcgtgatc
     3601 ggtttttttc ggcgcgattc gcatcgtttg attgatatcg agtgttgccc gatctcgcgg
     3661 gagcaggtca accgcgccct ggcagagttg cgcgaacaaa aacatgtccg ggacgggcat
     3721 tacacgctgc gaagtgcgtc cgagccgcgc gtgttttcgc aggtaaacga cgaggtcgca
     3781 caggcgctgc ggcatttaat tgtcgatctc gttccgccaa atcaggacct gttaatcgac
     3841 gcgtactgcg gcgcgggatt ttttgcaaaa gcgttgctcg acaaattcga gcgcgtgatt
     3901 gggattgatt gggaccggtt cgctatcacc ac
//
LOCUS       DATDAJ010000125         2277 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_789875, whole genome shotgun sequence.
ACCESSION   DATDAJ010000125 DATDAJ010000000
VERSION     DATDAJ010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_789875"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..>2277
                     /locus_tag="VIS53_02885"
     CDS             4..>2277
                     /locus_tag="VIS53_02885"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HEY5766763.1"
                     /translation="MGKNGIAIQSATTDSNGHCTFGSVAKSTREKTPIAFVARNGEDV
                     SFIPYNREDRQLNFSRFDIDGADSVLPENLDAFVFTERGVYRPGDDVHIGIVVKQRNW
                     NGKLGGLPIETEVVDARDHRVQTRKVNLPDSGFTELTYQTANDSPTGLYSFNVYLVKN
                     SKRSTLLGSSTANVKEFLPDRMKIETRLSQNAARGWIQPKEMRAAVVLANLYGTPATD
                     RKVTARLELAPSAFSFKEYPNYVFFDPLFDEKKERHEQTIELGENKTDSAGQTEFDLQ
                     LERFADATYSMRLIAEGFEAEGGRSVTGTVDVLVSALPYVIGCKPDGDLRYIEMDKPR
                     TIDLVAVDPQLNRIALANVTANVIAQEQVSVLTKQENGNFAYESVLKERVAKSKKISV
                     SANGLHYTLPTDEPGNYVFELRDDQDRRLTKLQFCVIGRGAVSRSLEKNVELQVKLDR
                     AHYNSGNEIAVSITAPYAGSGLITIERDRVYTQQWFHADSASSVQRIRVPEDFEGSGY
                     VNVAFVRALDSKEIFVSPLSYGVMPFTANKEKRRLNVEINASANAKPGEPLHINYKTD
                     RPSKIVIFAVDEGILHVTDYKTPDPLGFYFRKCMLRVDTAQIVDLIIPEFSLLRSVSA
                     FGGGGDIQRLNPFKRVTEKPVVFWSGIVDADSTKREVVYDVPDYFDGTLKIMAVAIAD
                     DAVASSERETLIRGAFVITPSVPVLAAPGDEFETGVTVANNVEGSGLNAEIELRAQTN
                     EQLSIAGGTSQTLHIPEG"
BASE COUNT          540 a          624 c          641 g          472 t
ORIGIN      
        1 cttttgggca aaaacggcat cgctatccaa agcgctacga ccgactccaa tggccattgc
       61 acgttcggat cggtcgcgaa atcaacgcgg gagaaaacgc cgatcgcatt cgtggcgcgt
      121 aacggggagg acgtatcgtt cattccgtac aatcgcgaag accggcaact gaacttttcg
      181 cggttcgaca tcgacggcgc ggatagtgtt ctgccagaaa acctagatgc attcgtgttc
      241 accgagcggg gtgtttaccg gcccggcgac gacgttcaca tcggcatcgt cgtgaagcag
      301 cgcaactgga atggcaagct cggagggctt ccgattgaaa ccgaagtggt agacgcgcgg
      361 gatcaccggg ttcaaaccag gaaagtcaat ttgcccgaca gcggattcac cgagctgact
      421 tatcaaacgg ccaatgactc gccgaccggc ctctacagct tcaacgttta cctcgttaag
      481 aacagcaagc gctccacctt gctcggttcg agcacggcga acgtaaaaga atttctgccg
      541 gatcgaatga aaatcgagac gcggctttcg caaaatgcag cgcgtggctg gatccagcca
      601 aaggaaatgc gcgccgcggt tgtgctcgca aatctttatg gaacgccggc aacagatcgc
      661 aaggtaaccg cgcggctgga gctcgcgccg agcgcattct ctttcaaaga atatccaaac
      721 tacgtctttt tcgatccgct gttcgacgag aagaaagaac ggcatgaaca gacgatcgag
      781 cttggtgaga acaagaccga ctccgccggc caaacggaat ttgatttgca gctcgagcgt
      841 ttcgccgacg cgacgtactc catgcgtttg attgcggaag gattcgaggc ggaaggcggc
      901 cgcagtgtca cgggcacagt agacgtgctc gtttcggctt tgccgtatgt gatcggctgc
      961 aaacccgacg gcgacttgcg gtacatcgag atggataaac cgcgcacaat cgatcttgtc
     1021 gcagtcgatc cgcagctcaa ccgcatcgcg ctggcaaacg tgactgcgaa tgtcatcgcg
     1081 caggaacagg tctccgttct gaccaagcag gagaacggca attttgctta cgagtcggtt
     1141 ttgaaagagc gcgtcgcgaa atcgaagaag atttcggttt ctgcaaacgg ccttcactac
     1201 accctcccca cggacgagcc aggcaattac gtgttcgagt tgcgcgacga tcaggatcgg
     1261 cgtctcacca aactgcaatt ctgtgtgatt ggccgcggcg cagtttcgcg gtcactcgaa
     1321 aagaatgtcg aactgcaagt caaacttgac cgtgctcatt acaacagcgg taacgaaatc
     1381 gcagtcagca ttaccgctcc ttatgctggt agcggactaa ttactatcga gcgcgaccgc
     1441 gtttacacgc agcaatggtt ccatgcggac tcggctagca gcgtccagcg tattcgtgtt
     1501 ccggaagatt tcgaaggcag tggttacgtt aacgtcgcgt tcgtccgcgc actggattcg
     1561 aaggaaattt tcgtcagccc gctgagctat ggcgtcatgc cattcaccgc gaacaaagaa
     1621 aagcgccggc tcaatgttga aatcaatgca tcggccaatg cgaagccggg cgaaccattg
     1681 cacatcaatt acaagacaga tcggcccagc aagatcgtta tcttcgccgt ggatgaagga
     1741 attcttcacg tcaccgatta caaaacgccg gacccgctcg ggttttactt ccgcaaatgc
     1801 atgctgcgcg tcgacacggc gcagattgtc gatctgatca ttccggaatt ttcgctgctg
     1861 cgctcagtgt cggcgttcgg cggtggcggt gacatccaac gcttgaatcc cttcaagcgg
     1921 gtcaccgaaa agccagttgt cttttggtcg ggcatcgtcg atgccgatag caccaagcgc
     1981 gaagtcgtct atgacgtgcc tgattatttc gatggcacac tgaagatcat ggctgtcgcg
     2041 atcgcggacg atgcggtggc ttcgagcgag cgcgagactc tgattcgcgg agcttttgta
     2101 attacaccga gcgtgcccgt gctcgcggcg cctggagacg aattcgaaac tggagtgacc
     2161 gtcgccaata acgtggaagg ctccggcctg aacgccgaga tcgaactgcg cgcgcaaacc
     2221 aatgagcaac tgtcgatcgc gggcggcacg tcgcagacgt tgcatattcc tgaaggc
//
LOCUS       DATDAJ010000126         3859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_790826, whole genome shotgun sequence.
ACCESSION   DATDAJ010000126 DATDAJ010000000
VERSION     DATDAJ010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_790826"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            385..2964
                     /gene="clpB"
                     /locus_tag="VIS53_02890"
     CDS             385..2964
                     /gene="clpB"
                     /locus_tag="VIS53_02890"
                     /inference="COORDINATES: protein motif:HMM:TIGR03346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEY5766764.1"
                     /translation="MRIDRYTQKVQEALQAAQDLASQLNNSEITNEHFLSALLDQSDG
                     IARPLLEKIGANVDQLQERLRTELERRPKIHGGVADLRVSNELRTVLDSAEKEMSKLK
                     DEFTSAEHYLLALAGVPQSGIPAAKLLKDLGGTRDKLMQGLQQVRGSQRVTDQNPEGK
                     FQALEKYGRDLTELARRGKIDPVIGRDNEIRRVMQVLSRRTKNNPVLIGDPGVGKTAI
                     VEGLARRIISGDVPDSLKNKRIIAMDIGAMVAGAKYRGEFEDRLKAFLKEVTDSQGQI
                     VLFIDELHTIVGAGAAEGSVDASNMLKPMLARGELRTVGATTIDEYRKYIEKDAALER
                     RFQPVLVNEPTVEDTIAILRGLKERYEVHHGVRITDGALVAAAVLSHRYITDRFLPDK
                     AIDLVDEAASRLKIELDSMPTEIDVIERQIMQHEMERQALKKEKDPASKERLKKLENE
                     LAALKEKSNALKAEWQKEKAFIDEQRTVKEEIERFRTELERAQRRGELGNASEIQYGR
                     IPDLEKKLADLTAKSAKNKKRLLREEVTEEDIAEVVSSWTGIPVSRLQEGEREKLVKL
                     EEHLHLRVVGQDEAIKAVSNAVRRARAGLQDPNRPLGSFIFLGPTGVGKTELARALAE
                     FLFDDENAMIRIDMSEYMEKHTVARLIGAPPGYVGYEEGGQLSEAVRRKPYSVVLFDE
                     IEKAHPDVFNVLLQVLDDGRITDGQGRTVDFKNTVVIMTSNIGSQYITEEESPEARRR
                     LVMDALRAHFRPEFLNRVDEIIIFDRLSEEELKTIVEIQLGRLSKRLEQQKITLKLSD
                     SAKALLAREGYDPVYGARPLRRAIQREILDPLSIDILEGKVREGQTVHVDAKDGALEF
                     REK"
     gene            2986..3360
                     /locus_tag="VIS53_02895"
     CDS             2986..3360
                     /locus_tag="VIS53_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766765.1"
                     /translation="MNARTKTNIRFNGREYANADEMPSDVRAAYDRAVDEMPPLHSGA
                     RLAAKLNAKIIVNGNEFSNAGEMSVDDRHLYHEALEALFPPDIAVSAAGAGETNGAKR
                     SPIVGAMKKRLSQAARALRLRR"
     gene            complement(3439..>3859)
                     /locus_tag="VIS53_02900"
     CDS             complement(3439..>3859)
                     /locus_tag="VIS53_02900"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY5766766.1"
                     /translation="SKIYGMAGLRCGYCVGQKEAIDRLRRNQMWDSVNCMALAAATAS
                     LDDLDHVPNGQRLNREAKTFVTSELDKMGYEQIPSQANFIMFDCKRPVVPLIQAMKQR
                     NVHVGRLFPALPNHMRLTIGKKTEMESFVSAFKQVTA"
BASE COUNT          938 a         1010 c         1134 g          777 t
ORIGIN      
        1 ccactgtcgg aaatgagcga accgatgatg tagcggcgaa agggtccctg acgtagcagc
       61 gcgagcgact tcgatccgac ccatttttcc tgcgcgttca tcgggaaaca ctcatcgttg
      121 taggggcgtt tgtgtcaaac ggagcgcgtt cgtactcttg ctcgtgctca tgctcctgct
      181 cgcgaccctg gacaatgacg aagcacgaat ggcgactgac gaaggaatga cgaagcgtga
      241 atgtcgaatc catgttcgca gcgcttcggt atgcgctccc gatcgcggac tttttctatc
      301 cgaaaggccg cacgaaaatc actgtgcgac aagaccaacg taaacggcgg attggaaacc
      361 gccgctcctt ggttactttg aaccatgcgc atcgacagat acacgcagaa ggtgcaggag
      421 gccctgcagg cggcgcagga cctcgcgtcg caactgaaca attccgaaat cacgaacgaa
      481 cattttcttt ccgctcttct ggaccaaagc gatggaatag ctcgcccgct cctcgagaag
      541 attggggcaa atgttgatca gttgcaggaa cggcttcgca cggagttgga gcgtcgcccg
      601 aaaatccacg gcggcgtcgc cgatctgcgg gtctcgaatg agctccgtac cgtgctggac
      661 agcgccgaga aggagatgtc caagctcaaa gatgaattca ccagcgctga gcattatctg
      721 ctcgcgttag ccggcgtccc gcaaagcggg attcctgcgg caaaattgct gaaggatctg
      781 ggcggtaccc gcgacaagct gatgcaggga cttcagcagg tgcgcggctc gcagcgggtc
      841 accgatcaaa atcccgaggg caaatttcag gcgctggaaa aatacgggcg cgacctcacg
      901 gaactggcgc gccgcggcaa gatcgatccg gtgatcggac gcgacaatga gatccgccgc
      961 gttatgcagg ttttatcgcg ccggacaaaa aataatccgg tgctcatcgg tgatccgggt
     1021 gtcggtaaaa cggcaattgt cgaaggtctg gcacggcgca tcatcagcgg cgacgtcccc
     1081 gattcactga aaaacaaacg aatcattgcg atggacatcg gcgcgatggt cgctggcgcc
     1141 aaataccgcg gagaattcga ggaccggctc aaagcgtttt taaaagaagt caccgattct
     1201 cagggccaga tcgttctatt catcgatgaa ttgcacacca tcgtcggcgc gggcgcagcc
     1261 gaaggttcgg tcgacgcgtc gaatatgctc aagccgatgc tggcgcgcgg cgagctccgc
     1321 accgtcgggg caaccacgat cgacgagtat cgcaaataca tcgaaaaaga cgcggctttg
     1381 gagcgacgct tccagccggt gctagtgaac gaaccgaccg ttgaagacac aatcgcgatc
     1441 ctgcgcggat taaaagaacg ctacgaagtg caccatggcg tccggatcac cgacggggca
     1501 ttggtcgcgg cagcggtgct gtcgcatcgc tacatcaccg atcggtttct gccagataag
     1561 gcgatcgact tggtcgatga agcggcgtcc cgtttgaaga tcgagctcga ttcgatgccg
     1621 acagaaatcg acgtgatcga gcgccagatc atgcagcatg aaatggaacg ccaggcgctc
     1681 aagaaagaga aagatccagc aagtaaagag cgtttgaaaa agctcgagaa tgaattggct
     1741 gcgctaaagg aaaaatcgaa cgcgttaaaa gctgagtggc aaaaggagaa agcgttcatc
     1801 gatgagcagc ggacagttaa ggaagagatc gagcgattcc ggactgaatt agaacgcgca
     1861 cagcggcgcg gtgaattggg caatgcgagc gaaatacaat acggtcgcat tcctgatttg
     1921 gaaaagaaat tggccgatct cactgcgaaa tcggccaaga ataaaaagcg tttgttacgc
     1981 gaagaagtga cagaggagga catcgccgaa gtcgtttcga gctggactgg cattcccgtt
     2041 tcgcgtttgc aggagggaga gcgcgagaag ctcgtaaaac tcgaggagca cttgcatctc
     2101 cgcgtcgttg gccaggacga agctatcaag gcggtgtcta acgcagtgcg tcgtgcccgg
     2161 gcaggtctgc aggatccgaa tcgaccgctg ggttcattca tttttctcgg accgactggc
     2221 gttggcaaaa cggaattggc ccgtgcgctc gcggaatttt tgttcgacga cgagaacgcc
     2281 atgatccgca tcgacatgag cgagtacatg gagaaacaca ctgtggcgcg cttgatcggc
     2341 gctccgcccg ggtatgtcgg ctacgaggaa gggggccagc tttcagaagc agtgcgtcgg
     2401 aagccgtatt cggtcgtgct cttcgatgag atcgaaaaag cgcacccgga cgtgttcaac
     2461 gtgctgctgc aagtgctcga cgacggccgc atcacggacg ggcaggggag aacggtcgat
     2521 ttcaagaaca cggtcgtcat catgacttcc aacatcggct cgcaatacat tacggaagaa
     2581 gaatctccgg aagcgcgtcg gcgactggtg atggatgcat tgcgggcgca ttttcgacct
     2641 gagtttttaa atcgtgtcga cgagatcatc atttttgacc ggctcagtga agaggagcta
     2701 aagacgattg tcgaaattca gcttggccgg ttgtcgaagc gtctcgagca acaaaagatc
     2761 acgctcaagc tatcggattc cgccaaggca ctgctcgcgc gcgaaggcta cgatcccgtt
     2821 tacggcgcgc gtcccttgcg gcgcgccatt caaagagaga ttctcgatcc gctcagcatc
     2881 gatattctcg aaggcaaagt ccgggaaggt cagaccgttc acgttgacgc caaagacggc
     2941 gcacttgaat ttcgcgaaaa ataggtctca ctactgatcc ttgtagtgaa cgcgaggacc
     3001 aagaccaaca tccggttcaa cggccgggag tatgcgaatg cggatgagat gccgtctgat
     3061 gtcagagcgg catatgatcg cgctgttgac gagatgccgc cgcttcattc cggagcgcgg
     3121 ctcgcggcaa aactgaacgc gaagatcatc gtcaacggga acgaatttag taatgccggc
     3181 gaaatgtcag tggatgatcg acatttgtat cacgaagcgc tcgaggcgct gttcccgcca
     3241 gacattgctg tatctgcggc tggggcaggc gaaacgaacg gcgcgaaacg ctcgccgatc
     3301 gtgggcgcga tgaaaaaacg cttatcgcaa gctgcaagag ctcttcggct aagacgctga
     3361 gcgtgcttcg gtcggcggtt gactctcctc cgccaggctt cggcgtggcg agcacaaccg
     3421 ccgctacaac atttagcctt acgccgtcac ttgcttgaag gcgctcacga aactttccat
     3481 ctccgttttc ttgccgattg taagtcgcat gtggtttgga agagctggga acaaccggcc
     3541 tacgtgaaca ttgcgctgtt tcattgcctg gatcagcggc acgacagggc gtttgcaatc
     3601 gaacatgatg aagttggctt gtgacggaat ttgttcatag cccatcttgt cgagctcgga
     3661 tgtcacgaat gttttcgctt cacggttcaa acgttgaccg tttgggacat gatcaagatc
     3721 atcaagactc gcggttgctg cggccaaagc catgcagttg acgctgtccc acatttgatt
     3781 tcggcgcagg cgatcgatcg cttctttctg gccgacacaa tagccacagc gcaatcctgc
     3841 catgccataa attttcgag
//
LOCUS       DATDAJ010000127         4250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_792633, whole genome shotgun sequence.
ACCESSION   DATDAJ010000127 DATDAJ010000000
VERSION     DATDAJ010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_792633"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..806)
                     /locus_tag="VIS53_02905"
     CDS             complement(<1..806)
                     /locus_tag="VIS53_02905"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY5766767.1"
                     /translation="MITGIVTTPDVCPMLVNGDWQELHNIETSPVHNPSTGNVIGFTP
                     LCTAVHVNDAVQAAAAAFSAWSETPPVERTRVLFRFKMLLEENFEDIARCNTREHGKT
                     LIESLGDVRRGIEMVEFVGKAEGAKILADGRGLQLNSGGFFLGATVLDEVQNEMAVAR
                     EEIFGPVLNVMRADDLENAIETINCSPYGNGASIFTRSGKSAREFKHRAKAGMVGINI
                     SVPASMAWFPFAGWGDSFFGDLHMQGKEGVQFFTQQKVTTTRWFAEGEGSV"
     gene            1128..1454
                     /locus_tag="VIS53_02910"
     CDS             1128..1454
                     /locus_tag="VIS53_02910"
                     /inference="COORDINATES: protein motif:HMM:NF016836.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEY5766768.1"
                     /translation="MAADEKANADNTATNQRDRSGETATSGDQSNSSEDLKITQAIRQ
                     ALMKDGELSTTAKNIKVITANGQVTLRGPVNNAQEKAKVDQIARSAGGGAKIVDQLDV
                     KNENNK"
     gene            1585..2004
                     /locus_tag="VIS53_02915"
     CDS             1585..2004
                     /locus_tag="VIS53_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766769.1"
                     /translation="MPDTGGTRDVGHVKATKAPEGATTGAATGGVTGGVLGLLAGIGA
                     LAIPGLGPFIAAGPIMAALSGAAVGATTGGVVGGLVGLGIPEIEAKRYDEKLRKGNYL
                     IAVHTDESDDVDRAKDIFKNAGAEDISTVSEASAPKR"
     gene            complement(2426..2782)
                     /locus_tag="VIS53_02920"
     CDS             complement(2426..2782)
                     /locus_tag="VIS53_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766770.1"
                     /translation="MKRKKPARQKEEDFHHNVYVVLLSDAVANHPSILRLNPNRDPLK
                     PCVYVGMTGIPVDHRFENHRNGYKSAWVVRKYGVRLMPELYEHLNPMPFEAALQMEIE
                     LAEDLRAAGYTVTGGH"
     gene            2905..3795
                     /locus_tag="VIS53_02925"
     CDS             2905..3795
                     /locus_tag="VIS53_02925"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEY5766771.1"
                     /translation="MKPASIQVSQMKIAAIINTSSGGCDSESEAEMLDILKGAGVTNC
                     KTWCGESDQIERAFAEVAAHKTEVLVVLGGDGTIRTAAEACIGTDTYLLPLPGGTLNV
                     LPRALYGDSSWQQALKETLANPLTKELSGGRVGDKLFFVAAVVGAPGLWMEAREAIRE
                     GDILNAIGKAGVAFEAMFDTTIQYFISPAVSGDAEVVAVICPLVSEQMSDSEQALEAA
                     AIDVDNATELLGLATAAAFGKWRDDESVTLTKTHQVTVQSKKDIPLFLDGERVKVGKE
                     TAITFVPQAVNVIVPENPIS"
     gene            complement(3848..>4250)
                     /locus_tag="VIS53_02930"
     CDS             complement(3848..>4250)
                     /locus_tag="VIS53_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha amylase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5766772.1"
                     /translation="RHDGLRRLVQHLNYTYKNESALWQLDDTYDGFDWIDFHDADNSV
                     VSFLRKSRDGYVVVLVVNATPMVRYNYRLGVPEAGFYREIINTDGETYGGSNVGNFGG
                     VQSESREWMGREHSILIHLPPLATVALKLEK"
BASE COUNT         1064 a         1111 c         1144 g          931 t
ORIGIN      
        1 acgcttcctt cgccttcagc aaaccagcgg gtcgttgtca ccttttgttg cgtaaaaaat
       61 tggacccctt ccttgccttg catatgcaga tcgccaaaga aggaatcgcc ccagcccgcg
      121 aatgggaacc aagccatgga agcaggcacg ctgatattaa tcccgaccat gcctgctttc
      181 gctcggtgct tgaattcgcg tgccgatttt ccagagcgcg tgaaaatgga agcgccgttg
      241 ccgtagggtg agcagttgat tgtttcgatc gcgttttcga ggtcatcagc tcgcatcacg
      301 tttagcactg gaccaaaaat ttcttcacgc gcgaccgcca tctcattttg cacttcatcg
      361 agaacggtgg ccccaagaaa aaagccgccg ctgttgagct ggagaccgcg accatcagca
      421 agaattttcg cgccttcggc cttcccaaca aactccacca tctcgattcc ccgccgcaca
      481 tcaccgaggg attcgatcaa ggttttgccg tgctcgcgcg tgttgcagcg cgcgatatct
      541 tcaaaatttt cctcgagcag cattttgaaa cggaacagca ctctcgtgcg ctctaccggt
      601 ggcgtttccg accatgccga aaatgccgcc gctgcggctt gcaccgcgtc gttcacatgc
      661 accgccgtgc ataacggcgt gaacccgatc acattgccgg ttgaaggatt gtgcaccggc
      721 gatgtctcga tgttgtgcaa ctcctgccag tcgccgttca cgagcatcgg gcaaacatcc
      781 ggcgtcgtca caatgccagt aatcaacaac taatttcgca aagcacgaag cgaaactata
      841 gctcgtccat gcgatgactc gccataggga ttcgtctgat tacgcgttcc tccttgagcc
      901 ctattgtggc ttcgatcgag cacaccgacg tcccctgcat aatgcagcac ttctcaattc
      961 aacactctgg cggtaaattt taacaatctg gcaacaaata ggaccggtgc tcgcagcggc
     1021 tgcgattaat acccgacagt tcctacaaag caactatgaa actaacacga accatcaaac
     1081 aagctttact agccttagct agttttagca taattagctt atcggcaatg gctgccgatg
     1141 aaaaggcaaa cgcggataac acggctacga atcagcgcga tcgctctggt gaaacagcca
     1201 cgtctggcga ccaatcaaac agttctgagg atttaaaaat cacgcaggcc attcgtcagg
     1261 cgctcatgaa ggacggcgag ctttcaacca ctgccaaaaa catcaaagtc atcaccgcga
     1321 atgggcaagt gacccttcgc ggtccagtta ataatgcgca ggagaaagca aaggtcgatc
     1381 agattgcgcg atccgcggga ggcggagcga agattgtcga tcaactcgac gtcaaaaacg
     1441 aaaataacaa ataaacctta acttaaacga aagattatta tgtctaaatc agtattcggt
     1501 attgcaacta cacagggtca agctgagcga attgttcagc agcttcaagc tcaaggcttc
     1561 gcaagttcag agatttcggt gctaatgccc gacacaggcg gtacacgtga cgtcggccac
     1621 gttaaagcca caaaggcacc ggagggagct accaccggtg cagcgacagg tggcgtgact
     1681 ggtggcgtgc tcggattact cgcaggaata ggtgctttgg ctattcccgg cctgggtcca
     1741 tttattgccg ccggtccgat tatggcggcg cttagtggtg cagccgtggg cgcgaccact
     1801 ggcggtgtcg tgggtggttt ggttgggctc ggtattccgg aaatcgaggc aaagcgttac
     1861 gatgaaaagc tgaggaaggg caactatttg atcgcggtcc acaccgacga aagcgacgac
     1921 gtcgatcgcg cgaaggacat cttcaaaaat gccggagctg aggatatcag cactgtcagt
     1981 gaagcatcag cgccgaagag atagaaattg agagacggaa atcatggctg aagaaagtta
     2041 catgaatcaa ggacctactg tctcaccgca gggggaaatg ggggaacaaa gcagacggca
     2101 acgaaccgga tccggttcgt cgagctcagg agcgaaccta caaagcagtg gaacttcgaa
     2161 acaaacggaa agcttgacac gggttggcgg tgcgagcggt caagtctggg acgaggccag
     2221 agagagtgtc cggacattaa aggaaaatac tgagcagtac gttcggaaga atcccgccaa
     2281 ggctatcttc acggcgcttg cgatcggttt tgtttctcgg gttgatgcga cgccattgat
     2341 tgcggggcac tgaaacgcgg tcggtttgca caaatcggta tcatcgcgag tgcgtgggga
     2401 cagtttcctg cgcgctcgcg agttttcagt gtccgcccgt aacggtatat ccggcagcgc
     2461 gtaagtcttc ggccaactct atttccatct ggagcgcggc ttcgaatggc atcggattca
     2521 aatgttcgta aagctcgggc atgagtcgca cgccatattt cctgacgacc caggctgatt
     2581 tgtaaccgtt cctgtgattt tcgaaccggt gatcgacggg aattcctgtc atcccaacat
     2641 atacgcaggg cttcagtgga tcgcggttcg gattgaggcg caaaatcgaa ggatggtttg
     2701 cgacagcgtc actcagcaga accacataaa cgttgtggtg aaagtcctct tccttctgac
     2761 gcgctggttt ctttcgtttc aattcgcagg caacaaaagc gcgcgtacgt tccgagcgtc
     2821 aacgtatttg cgcaagagag gtgtgatgtc cggtcgacga cgtaatgttc aacgttcgaa
     2881 gacacgtctc aatttacttc tgacatgaaa ccagcaagca tccaggtatc acaaatgaaa
     2941 atcgcagcca taatcaacac ttctagcggt gggtgcgact ccgaatccga ggcggaaatg
     3001 ctcgacattc tcaaaggcgc gggcgttacc aattgcaaaa cgtggtgcgg agagtcggac
     3061 caaattgagc gggcgtttgc ggaagtggcg gcgcacaaaa ccgaagtgct cgtagtactc
     3121 gggggagacg ggaccatccg tacggctgcg gaagcgtgca tcggaaccga cacctatctt
     3181 ctcccgctgc caggcggcac gctgaatgtg cttcctcgag cgctatacgg cgattcgtcc
     3241 tggcaacaag cgcttaaaga aacactcgct aatcctttaa caaaggagct gtcaggaggc
     3301 cgtgtcggag acaaactctt ttttgttgca gccgttgtcg gcgcccctgg gttatggatg
     3361 gaagcccgcg aggccatacg tgaaggcgac attcttaatg ccatcgggaa agctggcgtt
     3421 gcgttcgaag cgatgttcga cacgacaata caatatttta tttcaccagc agtgagtggt
     3481 gatgcagaag tggtggccgt tatctgccct cttgtatcgg aacaaatgtc cgattcagag
     3541 caggcgcttg aagccgctgc tatcgatgtg gataacgcca ccgaattact cgggcttgcg
     3601 actgcggcag catttggcaa atggcgtgat gacgaaagcg tgacgctcac caaaacgcac
     3661 caggtgactg tgcaatcaaa gaaggatatc ccgctgttcc tcgatggaga acgggtgaag
     3721 gtcggcaagg agacggcaat cactttcgtg cctcaagcgg taaacgtgat cgttccggaa
     3781 aacccgatca gctaacgaac aaatcagttt gtttaccgct cgccgcaatt ccgtctggcc
     3841 taacgaatca cttttccagc ttgagggcta cagtcgctaa aggcggcaaa tgaatcagga
     3901 tcgagtgttc gcggcccatc cattcgcggg actcgctctg tacgccaccg aaatttccta
     3961 cgttgcttcc gccgtaggtt tcgccgtcgg tgttgatgat ctcgcgatag aaaccggcct
     4021 cgggaacacc caaccggtag ttgtaacgca ccatcggagt cgcgttaacg actaatacaa
     4081 caacgtaacc gtctcgggat ttccgcagga atgaaacgac gctgttatcg gcgtcgtgaa
     4141 aatcgatcca gtcgaatccg tcataagtgt catccagttg ccagagcgcg gactcgtttt
     4201 tgtaagtgta attcaaatgt tgaaccagcc ggcgaagtcc atcgtgacgc
//
LOCUS       DATDAJ010000128         3285 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_802488, whole genome shotgun sequence.
ACCESSION   DATDAJ010000128 DATDAJ010000000
VERSION     DATDAJ010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3285)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3285)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3285
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_802488"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..839)
                     /locus_tag="VIS53_02935"
     CDS             complement(135..839)
                     /locus_tag="VIS53_02935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766773.1"
                     /translation="MTSLSESRSELDAMIADIELTLVSIIQGVALTVLIETSREVIAK
                     LEWMMWPYVLSGLIIILVFWSRVVLHILTVIRWPLEFGHNFLYIGCALVEAFSFAQLG
                     NPARWFAFVAAFLAVGCLLFAYDLRLIRMRARDRTGDVSDRLYALVTRDQWLNIGLLL
                     PAFFLVNVACASAIHLRPEFFLARDGHIWLIGLQLVAFAGYLSYVVIFYTKLAPLIAQ
                     ARAEWRAKSQANRTSV"
     gene            1120..1581
                     /locus_tag="VIS53_02940"
     CDS             1120..1581
                     /locus_tag="VIS53_02940"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5766774.1"
                     /translation="MNIIPYQAPESGPWSALDRWSNLRDELNSFFDMPFSSGFGRTGQ
                     LFTGWSPALDLYESGDHFVAAVELPGMRKEDIDISLHDGALTISGERKHESNNGETAQ
                     RTERYVGTFRRSIALPTRVDANKVSATYQDGILKVTLPKAEEAKPKQIQVS"
     gene            1606..1977
                     /locus_tag="VIS53_02945"
     CDS             1606..1977
                     /locus_tag="VIS53_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5766775.1"
                     /translation="MNTLTRETRESDRSQAEQFITPPASVREIGDGYTLEIEMPGVKK
                     DGLEISVESNELTIIGRRSLPAMEGTLIHRESHPENFRRLFEIDPSIDANKISAKIDQ
                     GLVMLTLPKAEHVKPRKITVS"
     gene            2108..3145
                     /gene="recA"
                     /locus_tag="VIS53_02950"
     CDS             2108..3145
                     /gene="recA"
                     /locus_tag="VIS53_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017978889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEY5766776.1"
                     /translation="MATKTEERTAADKLAAARNKNLDLAIQQIAKDYGEGAIMRLGGE
                     KIVDIDVIPTGNILIDRALGVGGFPRGRIVEVFGPESSGKTTLALTVIAQAQKRGGLA
                     AFIDVEHALDPAYAKRLGVNLDDLLVSQPSSGEEALRICETLVRSNALDVIVLDSVAA
                     LVTRAELEGEIGDTTVGAQARLMSAALRKLTSLISKARTCCIFTNQIREKIGVMFGNP
                     ETTPGGKALKFYASMRVDIRRIGAIKQTDGVVTGNRTRVKVVKNKVAPPFTEAEFDIM
                     YNEGISSVGALLDVALEQQIIEKRGSWLNYKGTQLAQGRDAAKEVLKSDKALYDEIEA
                     AVKVKLDEDKE"
BASE COUNT          842 a          867 c          900 g          676 t
ORIGIN      
        1 aaacgcagaa gccgatgacc caccaaaatt cataagaact cgatagccct gcttgcggac
       61 gacctctcat tcgcatgaaa ttaggctcag cgcgcagcag aattgaaccg tcaactcgaa
      121 gtggattcgg tgagtcaaac ggacgtccta ttggcctggc tttttgcccg ccattccgcg
      181 cgcgcttgcg caatcaaagg cgcgagtttg gtataaaaga tcaccacgta tgacaaatat
      241 cccgcgaatg cgaccagttg caggccgatt agccagatat gtccatctcg agcgagaaaa
      301 aactcaggtc gcaagtgaat tgcactcgcg caggcaacat tcaccagaaa gaaagctggc
      361 aataacaatc cgatgttgag ccactgatcg cgtgtcacaa gcgcatacag ccggtcgctc
      421 acatctccgg tgcgatcccg cgctcgcatg cgaatcaggc gcagatcgta cgcaaacagc
      481 agacaaccga cggcgagaaa tgctgctacg aacgcgaacc agcgcgcagg gttgccaagt
      541 tgtgcgaatg aaaacgcctc cacaagcgca caaccaatgt agagaaaatt gtgcccgaac
      601 tctaaaggcc agcgtatgac cgtaagaatg tgcagcacca cacgcgacca gaagaccagg
      661 ataataatca aacctgacag cacgtacggc cacatcatcc attccaattt cgcaatcacc
      721 tcacgcgagg tttcgatcaa caccgtgagc gcgacaccct gaatgatgct caccagtgtg
      781 agctcgatgt cggcgatcat ggcatcgagt tcggagcgac tttcgctcag cgaggtcaca
      841 acgcgactcg taaccgtttc acgacaaaat tgtcaagcgg tgggcagcgt acgctgggca
      901 ggaaacagtg aaattttgtc tctacagctg atatgtcctc ggttcgcgtg tgccaattag
      961 accagacttc attcgccaat atcggacgac ttatccgcta aatgactgca tttcgaaagt
     1021 ttatgaacac gcgttcgcgg actgcttctt tggcacgacg cgagctactt gaatcgctga
     1081 actcaaaatt cgtaatccaa gaaaggagat tttaaaatta tgaacataat tccttatcaa
     1141 gctccggaat cggggccatg gtcggcgttg gatcgctgga gcaatctgcg ggacgagttg
     1201 aactcgttct ttgacatgcc gttctcgtct ggttttggcc gcacaggtca gctttttacc
     1261 gggtggtccc ccgcgctcga tctctacgag agtggcgacc atttcgtggc cgccgtcgag
     1321 ttgcccggaa tgcgtaaaga ggacatcgac atttctctgc acgacggggc gctgacgatc
     1381 agcggcgagc gcaaacatga gagcaacaac ggcgaaacgg ctcagcgcac tgaacgctac
     1441 gtcggcacat tccgccgcag cattgcgctg cccacccgtg tggatgccaa caaggtcagt
     1501 gccacctacc aggatggaat cctcaaagtg acattgccga aggctgagga agcgaaaccg
     1561 aaacaaatcc aggtgagcta aacagaaact gaaaggagtt ttaccatgaa cactttaacc
     1621 cgagaaactc gcgaatctga tcgcagccag gccgagcagt ttattacgcc gccggccagc
     1681 gtcagggaaa ttggtgatgg ctacacgctc gagatcgaga tgccaggcgt gaaaaaggat
     1741 ggcctcgaga tttcggtcga aagcaacgag ctgacaatta ttggacggcg ttcgcttccc
     1801 gcgatggaag gaacgctgat tcatcgcgaa tcgcatccgg aaaatttccg gcgcctgttc
     1861 gagattgatc catcaatcga cgccaacaaa atcagcgcga agatcgatca gggcctcgtg
     1921 atgttgactc tgcccaaagc cgagcacgtc aagcctcgca agatcactgt ctcgtaggaa
     1981 attagaaccg gcgaagtttt aaggccgcga gcatcatgct cgcggccttt tcgctgctgt
     2041 cggtcgacgg ccatcgcttt tgtgcttggc gaatgctcgc gtgcgtcgta gttagattct
     2101 tcctgatatg gccacaaaga ccgaagaaag aacagccgct gataaactgg ctgccgcgcg
     2161 aaacaagaac ctcgacctgg cgatccagca gatcgcgaaa gattatggcg aaggtgcaat
     2221 catgcgtctg ggcggggaaa agatcgttga tatcgatgtc attccgaccg gaaatatttt
     2281 gatcgatcgc gctctcggag tcggcggatt tccgcgggga cgaatagtcg aagtcttcgg
     2341 ccctgaatcg tccggcaaaa ccacccttgc acttacggtc atcgctcagg cgcaaaagcg
     2401 cggcggtctc gcggcattta ttgatgtcga gcacgcgctg gatcctgcct acgcaaaaag
     2461 actcggcgtc aatcttgacg atttattggt ctcgcagccc agctcgggtg aggaagcgct
     2521 acggatatgc gagacgctgg tgcgttccaa tgcactggac gtcatcgtac tggattctgt
     2581 ggcggcgctg gtgacgagag cggagctgga aggggaaatc ggtgatacga ccgttggtgc
     2641 ccaggcccgc ttgatgagtg cggcattgcg caagctcacg tccctgattt caaaagcgcg
     2701 gacctgttgc attttcacaa accaaattcg cgaaaaaatc ggcgtgatgt ttggaaaccc
     2761 ggagacaact cctggtggaa aagctttaaa gttttacgcc agtatgcgcg tcgatatccg
     2821 tcgaatcgga gcaatcaagc aaaccgacgg cgtcgtcacg ggtaaccgca cgcgtgtcaa
     2881 agtggtaaag aacaaggtag cgccgccatt caccgaggcc gagttcgaca tcatgtacaa
     2941 cgagggaatt tcgtcagtcg gcgctcttct cgacgtcgcg ttagaacaac agatcatcga
     3001 gaagcgcggt tcctggttga attacaaagg gacgcagctt gcacagggcc gcgatgccgc
     3061 aaaagaagtc ttgaagagcg acaaggcgct ttacgacgag atcgaggctg ctgtcaaagt
     3121 gaagctggac gaagacaaag agtaatgtcg tagcacagcc atccttgctg tggggcaggg
     3181 ggcatctcgt tcgttatagg gcgaatccgc cgtggcggac ctgtcggcgc tattgagcgt
     3241 ggcggtttca ggtttcctga aattcgtgtt tattcgtgat taccc
//
LOCUS       DATDAJ010000129         5897 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_813154, whole genome shotgun sequence.
ACCESSION   DATDAJ010000129 DATDAJ010000000
VERSION     DATDAJ010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5897
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813154"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VIS53_02955"
     CDS             complement(<1..874)
                     /locus_tag="VIS53_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766777.1"
                     /translation="MKTQIFSLCMFACTACAFDIDDTLDRLDSTLTISGFQDSFRARL
                     SGTVDLEFYNFQQPAPGLIDSKIDNLFNPRLTLFLDAHAGSQVYFFAQARLDRGFDPS
                     DHGAEVRLDEYALRITPWQDGRFTLQVGQFATVVGNWVPRHLPWDNPFINAPLVYENV
                     TAIQDKYAPYSPFYFIYAPYYQEKYAFNPVIWGPSYASGISVSGRLGRFDYAVEMKNA
                     SLSSRPESWYITENGFENPTFSSRVGFRPNEAWNLGFSASEGPYFRREAESSLPPGRD
                     ISDYREFVLGQDISF"
     gene            complement(871..2619)
                     /locus_tag="VIS53_02960"
     CDS             complement(871..2619)
                     /locus_tag="VIS53_02960"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY5766778.1"
                     /translation="MSATVATRSKDVASFRTRLFTAIMVIVATLTALGFYLAQRRVTA
                     DAERNLQQTFQTELSSMHKVEELRHAALADRCNTLVAKPRIHAAIEDDAIDLLYPTAR
                     DELRDLMEGEEPPPEQAARSLHARFYRFLDDTGAVIKPPNPSDVGELDAATEAQLSLT
                     KLPDTRQIGYIQSAGAIHEVIAVPIFSTDTGELVSALVIGFKPFEPENKSTGMQSGIW
                     VDGHLHLPALAPAAQNSLNEKVTTALANFDSEQNYFRVEVAGAPQLLFYKGLNPGSLF
                     PPAYEIFLYPLGSWTAQLHRLRWQIGGAGALLLLGGFVASHFVARSMSAPVKKLALDS
                     EENRAERERAEAALASTAEELERSTRYSADASHQLKSPMTVLRIGLESLLEREGFKPE
                     VYEELSTLLHQTRRLTGVIDDLLLLSRMDAGHLQIASTPVNLSQLVDEWLDDLDALPD
                     SPDVKIEKEFPRGLFVGGEKRYTSLIVQNLLENARKYNRAGGRIRVSARGNGRDVVLT
                     IGNTGRTIPQGENIFERFHHSSSPSAASGHGIGLNLARELTRLHGGELRLVRSESDWT
                     EFEVRFSAANGVNAVT"
     gene            complement(2616..3215)
                     /locus_tag="VIS53_02965"
     CDS             complement(2616..3215)
                     /locus_tag="VIS53_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY5766779.1"
                     /translation="MPASLFAGAAVEGRVELPKSRSAPVQAKRYQIVTKAGVLSTQPP
                     LAVVYLDGNFSRPASLPTKEVEQKDLTFIPALLPIEVGTKVQFPNLDDQYHNIFSYSP
                     VKRFDLGRYRPEERPIPSVMFDKPGLVTLRCDIHEHMRGLILVLKTPYFVMTDTAGRF
                     RLEGLPVGHYTLKAWIDSRTTREKSIDLKEGQTLHVDLP"
     gene            complement(3331..>5897)
                     /locus_tag="VIS53_02970"
     CDS             complement(3331..>5897)
                     /locus_tag="VIS53_02970"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEY5766780.1"
                     /translation="KRYSAIPGSPLALASSRRFVLNGGLLMRISDFIARTITQRRALV
                     WCGVAVLTIVCIATLLTSLRLDSEIFNVLPGKFPSVQGLKIYDHDFEQTRELTFALVS
                     DPQDVDKLEEFAPVFAERLRGQTWCARVLAGSPMTTADGIRDLQSIAVPLLLNLEPSG
                     FDEAMSILQPDKIRERLHRLREQIEAGSPRPQFELSFDPLGLIAPALKPFAQSTAIEQ
                     EQPLTSPDRTMRIFLVVTNQKSISAFECQHLMRRVNEFRKTATDGWDGSHPLQILVTG
                     RSAFVSEISLSMRYDVVATLLGSVVLVSMIFFAGFRRWLPLAGMAFCLLLSCLVALTA
                     GQLLFGRLSMISVGFCAILVGLGVDFAILTIGRYHQARADGEPHQQAIATSVAKLGRA
                     VFFGALTTAVGFLALALSGAMSFAELGVLIAIGIFVAGLLMCSILFLFVGEGQGAIAR
                     DWLFDLVAKYVRGIVRRPAPVLIFSCVILLLLTAIGFSPVPPLEFEASTRSLQPKNIR
                     AGQALETIMKKMPVRWEPVLAIVRATNSQELHDYWQKISAHWRESQAAGKIKGFSTPA
                     ALCPSPIWMGRNRDRLRGINFQAAHQTLTETLEAEGFSVEAFAPAFALLDDLQRVADP
                     GVPLPNWRTQLPEASSWWFLIDRYFGQDPLLTTGFVMTNGPLATHEQSQELQRGLSVP
                     GVPLILTGWTYVLADLQPWSHHQLLIISALMAIFDISLLAILYRDVRLWLIQIITLAF
                     GIGAMIATMKLLNIHLNLLNVLSFRLVLAIGVDYGIYVVLVWQKTHDVQHDVAGVVKP
                     VLLAGLTAISGFGSLALARNPALTGLGIACAIGIFWSLIATIFFTLPAMAATKPKC"
BASE COUNT         1385 a         1626 c         1654 g         1232 t
ORIGIN      
        1 cgaagctgat atcttgtcca agaacaaact ctcgatagtc gctgatgtcc cgaccgggcg
       61 gcagcgacga ttctgcttca cgtcgaaaat atgggccctc gctggccgag aaacccaaat
      121 tccacgcttc gttaggccgg aatccgaccc tgctgctaaa agtcggattt tcgaacccat
      181 tttcggtaat ataccaggat tcgggacgcg aggagagtga cgcattcttc atttcgacgg
      241 cgtaatcgaa ccgacccaat cggccggaga cagaaatccc gctggcataa ctcggtcccc
      301 agatcaccgg attgaaggcg tacttttcct ggtagtaagg tgcatagatg aaatagaagg
      361 gtgaatacgg cgcgtacttg tcctgaatgg cagtcacatt ttcataaacc aacggcgcgt
      421 taataaacgg attgtcccag ggtaagtgtc gcggaaccca attgccgacg acggtcgcga
      481 attggccgac ctgtaatgta aaacgaccgt cctgccacgg ggtgattcgc agcgcatact
      541 cgtccaagcg aacctcggcg ccgtggtcgc tcggatcgaa cccgcgatcg agtcgcgctt
      601 gcgcgaagaa atacacttgc gaacccgcgt gcgcatccag aaacagcgtg agacgcggat
      661 tgaagagatt gtcgattttt gagtcgatga gaccgggggc gggctgttgg aaattataaa
      721 attccagatc gactgtgccg ctcaatcggg cgcgaaaact atcctgaaac ccggagatcg
      781 ttagtgtgct gtcgagccgg tcgagagtat catcgatgtc gaaagcgcac gccgtgcacg
      841 caaacatgca caggctgaag atctgcgtct tcatgtaact gcattaacac cgtttgcggc
      901 ggaaaagcgc acttcgaatt ccgtccaatc gctttccgaa cgcaccaggc gcagctcacc
      961 gccatgcagt cgcgtcagtt cgcgtgccag gttgagaccg atcccgtgac ccgatgccgc
     1021 cgagggactc gagctgtgat ggaaccgttc gaagatattt tcgccctgcg gaatcgtgcg
     1081 accagtgttt ccgatcgtca gcacgacgtc tctgccgttg ccacgtgcgc taacccgaat
     1141 tcgcccgccg gcacgattgt actttcgcgc gttctccaga agattttgca cgatgagcga
     1201 cgtatagcgt ttctcgccac cgacaaaaag cccgcgcgga aattcctttt caatcttcac
     1261 gtccggggaa tcaggtaacg cgtcaagatc atccagccat tcatcaacca gctgactaag
     1321 attcacgggt gtcgatgcga tttgaaggtg accggcatcc attcgcgaca acaaaagcaa
     1381 atcgtcaata acaccggtta accggcgtgt ttgatgaagc agagtggaca actcctcgta
     1441 gacttccggc ttaaatcctt cgcgttccag cagtgattcg agaccgatcc gaaggaccgt
     1501 cattgggctt ttcagctggt gtgacgcgtc ggctgaatat ctggtggatc gctccagttc
     1561 ctcggcggtg gatgccaggg cggcctcggc gcgttctcgc tctgcacgat tttcttccga
     1621 atcgagcgct agtttcttca cgggcgcgga catgctgcgt gccacgaaat ggcttgcgac
     1681 gaatccgcct aacaacagaa gcgcgccggc cccgccgatc tgccagcgga gacgatgcag
     1741 ttgtgctgtc cacgagccga gaggatacaa aaaaatttcg tacgcgggtg gaaacaacga
     1801 tcccggattg agccccttat aaaacaatag ctgaggcgca cccgccactt ccacgcgaaa
     1861 atagttttgc tctgagtcaa aattagcgag cgcagttgtt accttctcgt tgagcgaatt
     1921 ttgagcggcg ggggcaagcg cgggcagatg caggtggccg tcgacccaaa tgccactttg
     1981 catgccggtg cttttgtttt cgggctcaaa aggcttgaac ccgatcacga gcgccgaaac
     2041 cagttcgcct gtgtcggtcg agaagatggg cacggctatc acttcgtgaa tagcgccagc
     2101 agattggatg tatccgatct gccgcgtgtc gggcaatttt gtcagcgaca gttgagcttc
     2161 tgtcgctgcg tcgagttctc ctacatccga gggattgggc ggcttgatga ctgcgccggt
     2221 gtcgtccaga aagcgataaa atctcgcgtg aagagatcgt gctgcctgtt ccggaggcgg
     2281 ttcctcgcct tccatcaggt cgcgcaattc gtcccttgcg gtgggataca ggagatcgat
     2341 tgcatcgtcc tcgatcgcgg catgaatccg cggcttcgct accagtgtgt tgcagcggtc
     2401 ggcgagcgcg gcgtggcgca gttcctcgac tttgtgcatc gaagaaagct cggtctgaaa
     2461 tgtctgctgc aggtttcgct ccgcgtccgc ggtgactctg cgctgggcca aatagaaccc
     2521 aagcgcagtc aacgttgcta caattaccat gattgcggtg aacaatcggg tacgaaagct
     2581 cgcgacgtct ttgcttctcg tcgcaaccgt ggcactcatg gcaaatcaac gtgcagcgtt
     2641 tgaccctcct tcaagtcgat tgacttttcg cgcgtcgttc tgctgtcgat ccacgccttg
     2701 agagtgtagt gaccaactgg aagcccctcc aatcgaaagc gaccggccgt gtctgtcatc
     2761 acgaagtacg gcgtcttcaa caccaggatc aatccacgca tgtgctcgtg aatgtcgcag
     2821 cggagagtca ccaaccccgg cttatcaaac atcaccgagg ggatcggccg ctcctccgga
     2881 cgataacggc cgagatcaaa tcgcttgacg ggagaatagg aaaaaatgtt gtgatattgg
     2941 tcatctagat ttggaaattg tacctttgtt cccacctcta ttggcagaag cgctggaatg
     3001 aacgttaaat ccttttgctc cacttccttt gtcggcaacg aagctggtcg tgaaaaattg
     3061 ccgtcaagat agactacggc cagcggcggc tgcgttgaaa gaactccggc cttggttacg
     3121 atctggtacc gctttgcctg aaccggcgcc gagcgcgatt tcggaagctc cacgcgtccc
     3181 tcgacagccg ctcccgcgaa aagcgaagcg ggcataacgg ataaagccgc atttagccac
     3241 agcaatccct tacggcgcat tgcttgctag tttaacaggc ctttacctga acggaaagtg
     3301 tcggaaccgc gcggagctta acggttggtg ttagcacttg ggtttggtgg ccgccatcgc
     3361 aggtaaggtg aagaaaattg tggcgatcag actccagaaa atgccgatgg cgcacgcgat
     3421 gcctagtcca gttagcgctg ggttccgcgc aagagcgagc gacccgaaac cactgatcgc
     3481 cgtcagtccg gcaagcaaca ccggtttcac aacaccggct acgtcatgct ggacgtcgtg
     3541 cgttttttgc cagactagca cgacgtaaat tccgtagtcc acaccgatag caagcacgag
     3601 acggaatgag agcacgttca acagattcaa atggatgttc agcagcttca tggtagcgat
     3661 catcgctcca atcccgaacg cgagtgtaat aatctgaatt agccataaac gaacatcgcg
     3721 atataaaatc gccagcaatg agatgtcgaa aatggccatc aacgcgctga tgatcaggag
     3781 ttgatggtgc gaccacggtt ggagatcggc gagcacgtag gtccagcctg taagaatcaa
     3841 gggaacgccg ggcacggata gaccgcgttg cagttcctgg ctttgttcgt gtgttgcgag
     3901 cggtccgttg gtcattacaa atccagtggt cagcaacggg tcttgcccga aataccggtc
     3961 gatcaaaaac caccagctcg atgcttcagg taactgggtt cgccaatttg gtagcggcac
     4021 gccgggatcg gccacgcgtt gtaaatcgtc gagcaacgcg aacgcgggag caaaggcttc
     4081 tacgctgaat ccctccgcct cgagagtttc ggtcaatgtt tggtgtgccg cctgaaaatt
     4141 tatcccgcgt aaacggtcgc gatttcgtcc catccagatc ggcgacggac aaagtgccgc
     4201 gggtgtggag aaacccttta tctttccggc agcctgggat tcacgccaat gcgcggaaat
     4261 tttttgccaa tagtcatgca gttcctggga gtttgtcgcg cgaacgatcg ccagcaccgg
     4321 ttcccagcgg accggcattt ttttcatgat tgtttcaagc gcctgacctg cgcgaatatt
     4381 ttttggttgg agcgaacgcg tgctggcttc gaattcgagc gggggaacgg gcgaaaagcc
     4441 tatggcagtg agcagcagca aaatcacaca ggaaaaaatc agtacgggag ccggtctgcg
     4501 cacaatcccg cggacatatt tcgctaccag atcaaagagc cagtcgcggg caatcgcgcc
     4561 ttgtccctcg ccgacaaaca aaaataaaat cgagcacatc aacaggccgg cgacgaaaat
     4621 gccgatcgcg atcagaacgc cgagttcggc aaaactcatc gcgccactca gcgccagtgc
     4681 gagaaaacct actgccgtcg taagcgcgcc gaaaaagacc gcgcgtccaa gttttgccac
     4741 cgaagtggcg atggcttgct ggtgcggttc gccatcggcg cgcgcctggt gatagcgtcc
     4801 gatggtgaga atcgcgaaat caacgccgag tccgacgaga atggcgcaaa agccgacact
     4861 gatcatgctc agccgcccga aaagaagctg gcccgcagtt agcgctacca aacacgagag
     4921 aagaaggcaa aacgccatgc ccgccaaagg cagccatcgg cgaaacccag cgaaaaaaat
     4981 catgctcacg agcacgactg agccaagcaa tgtcgcaacg acatcgtagc gcatgctcaa
     5041 cgaaatttcg gatacaaacg ccgagcgccc ggtcacgaga atttgcagag gatggctgcc
     5101 gtcccatccg tcggttgcgg ttttgcgaaa ctcgttcacg cgccgcatca agtgctggca
     5161 ttcaaacgcg ctaatcgact tttgattcgt caccacgaga aagattcgca tggtgcgatc
     5221 tggtgatgtg agcggttgtt cctgttcgat cgcggtgctt tgagcaaaag gtttaagcgc
     5281 gggcgcgatc agtccgagcg ggtcgaatga aagctcgaat tgcggccgcg gggagcccgc
     5341 ttcgatttgc tcccgcaacc gatgaaggcg ctcgcgaatt ttgtccggtt gcaggatcga
     5401 cattgcctcg tcgaaaccgc ttggttccag gttgaggagc aacgggaccg cgatcgattg
     5461 cagatcgcga atgccatccg cagtggtcat gggcgaacct gcgagcacgc gcgcgcacca
     5521 cgtttgcccg cgcaaccgtt ccgcaaacac cggcgcgaat tcctccagct tatcgacgtc
     5581 ctgcggatcg gagacaagcg cgaacgtcag ctcacgtgtc tgctcgaaat cgtgatcgta
     5641 gattttcagg ccttggaccg atggaaattt gccgggcaaa acgttgaaga tctcagaatc
     5701 cagtcgcaat gacgtgagca gagtggcgat gcaaacgatg gtcagcacag ccacaccgca
     5761 ccaaaccagc gcgcgacgct gtgtgatggt tcgggcgatg aaatcgctga tgcgcatgag
     5821 caagccacca ttcaacacga atcggcgtga agatgccaat gcgagcggcg atcccggtat
     5881 cgcgctgtag cgcttag
//
LOCUS       DATDAJ010000130        12954 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_813349, whole genome shotgun sequence.
ACCESSION   DATDAJ010000130 DATDAJ010000000
VERSION     DATDAJ010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 12954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12954
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_813349"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..727
                     /locus_tag="VIS53_02975"
     CDS             <1..727
                     /locus_tag="VIS53_02975"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5766781.1"
                     /translation="GIEMSAQISLSCDRIERYLGEEEERVHALRGVSLEIETGSVHAV
                     VGPSGCGKSSLLYILGLLDTPDAGRVAIETEAVSHLSDDELAQKRNKFIGFIFQFHFL
                     MEDFTAQENVMIPMRKLGELSDAQMRNRAAELLDGVGLGDKVRRPSRHLSGGEQQRVA
                     IARALANDPRVILADEPTGNLDTANSERAFGLLQNLVHERGKALLLATHNPAIAEACD
                     WIHEMKDGRIVASHPRGIRSSSI"
     gene            complement(724..3210)
                     /locus_tag="VIS53_02980"
     CDS             complement(724..3210)
                     /locus_tag="VIS53_02980"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEY5766782.1"
                     /translation="MISSARMRLWASIWQRPLLLGAVPMLLLICGFRSLPEEEGKAAG
                     QRQIYSVEKFRTVVLLLDSVGTPMAFDPTLMPFVSSLTSSSLFGESRACPMKMTFPCV
                     KSIFEGRVATTGTSLQDFSAVASKRVTWPDSLATLGKRLVVASDHTINRLYPAAFVDS
                     LNYEDLNVPLFERDKYAYRQTDKWMADPRIDVLLLHIIGTDKVAHQYVVRGPEYREKY
                     LEVDNFVRSVAERLTPKDYLYVIGDHGHNEQGGHTQDAAYIAHGPLFPQGKHEDLDQA
                     DMLFLLSVPYALALPDEYEGAFRTDLTLLPVELRQTFLHAQAQISRVPERGLSSDTLE
                     AQLNTHVMQNRDEAHHQHAIEVVRRVAPWILAAALFLLSQFQSRSRATIRPDRADLIA
                     LVLLAFGILLGIAGFASGAWLASIAALFWCIRHLGVVRTLAALCLLALLATFAFWLLP
                     SGAAWFHTKPNQPIGWSVFYPVAALAGVVFSFTSGARTLRQRITQVLWMIGVAIWLLT
                     YFGPYKYALTGRGPIIVLMILTPIAIIVASGWRILISVPTLFGFALVPFVTFRTESYT
                     ISFPFLDRISAMPLAVNVTICAVVGLIWLYAFHFGRNRRINWPRGMFLFAIWIFLGIA
                     LFQFETGKLIGSVLGGIWLAGCLELFRRAGLSVNWSALVSAIMFFTVFHFVLNGFALS
                     HVDFRFASEKIIPFQQEVFRAPQLIAWVVLKYFFILLPVFFVVLVASGGARLALRLAQ
                     FGWWRELMLAVCALGLSLFNTGGLSELCGEEIYFWTFLNLVIWLLVIVSTGAGGSWHL
                     NDTANESGNAARDQLREPLSPPQLAASQRS"
     gene            3368..4702
                     /locus_tag="VIS53_02985"
     CDS             3368..4702
                     /locus_tag="VIS53_02985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766783.1"
                     /translation="MTWNRLRHLHKEPPIIEAWLGLFGPILRWLTPSRRRLLLCLAAL
                     YIAVKYSLRTLARLGNSLGSAPSLAYAFLLVIVLFAFVFLSWFAAKNFASLPLFVRRR
                     PQICLHAIFWVLLVVAWITRPSGGPSQILLFGSIFALPFLLWRVGYMMFTAQHGKIAG
                     TRFADHLFYLFPYWGGSDTPYGKGFDYLAANEARDEAALAKSQLAGLKCFVLAGLWVI
                     TKALLVATVFVDGRVPRMGVAFANPELYPIWLRWIALYLELVWSVLSIAVTGHLIIGW
                     LRLFGFHVFRNTYKPLLSESIIEFWNRYYYYFKELLVNFFFYPIFTRHFKGSPRLRII
                     AAVFAAAFVGNMYYHWLRLDNELVAGDFRGMWAILESRVFYCFLLAVGISVSMLREQK
                     RVKAKLTRSVARRAVAIFGVWTFFGVIHIWALKAPAPFILRTKFFLGLLSLG"
     gene            4721..6241
                     /locus_tag="VIS53_02990"
     CDS             4721..6241
                     /locus_tag="VIS53_02990"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY5766784.1"
                     /translation="MLLELQVGNLIEPFSDRRWDGAEIKRQVARRIIRFQARELRPGD
                     RVFLPFGNRLEFFAELLAIWQLGGCAIPIDARLTAFEVENLSRIANPRLAIVDEATPA
                     NLARALDAAGVGVFETTKIDNNEGTASHIRLDDDALILFTSGSTGDPKGVVHTHRSLR
                     ARWIGLRDHLPPDAFARSLCMLPTHFGHGLICNCLFPWLSGHDLYITPPFRPDLVMRL
                     GNLIDEHGITFMSSVPPIWKLALKLAKPPQRGSLRRVHCGSAPLSAVAWDEIRQWTGT
                     RQVCNAYGITETGSWVAGLDNADVPAKDGLIGTGWGAVIQILRTNDSTQPLREEDRCA
                     IGDSGYVWLNTPALMKGYFGRDDLTIKAVRDGWFMTGDIGLLDDRGRLLLRGRERDEI
                     NKGGMKIYPSDIDSVVERFERAKDVCTFALDDPIYGQAVGMAIVLADKQDETIRALHA
                     QMSLQLAEHKMPSRWWLLDDIPRTSRGKLNRDAVKAACQKQSALDLPSILGSGKRA"
     gene            6238..6498
                     /locus_tag="VIS53_02995"
     CDS             6238..6498
                     /locus_tag="VIS53_02995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766785.1"
                     /translation="MNTARDEQKGKLLSFLRTIQKAGLPIEGLGEADPLVASGLIDSL
                     AILQIVTYLETAYEIDFSLRGVDPEQLGSIGGILDLIEQEKK"
     gene            6495..7361
                     /locus_tag="VIS53_03000"
     CDS             6495..7361
                     /locus_tag="VIS53_03000"
                     /inference="COORDINATES: protein motif:HMM:NF025091.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEY5766786.1"
                     /translation="MNVSTSSAQSPGNRMRAALRQGQIKPFIGVYDVFSAGLAGRHYD
                     ALFLSGFGFAASFYGLPDIGFITWSDMVSYVQRSRTVLPAHHLLVDIDDGYTDPDVAC
                     HVVSVLEDQKRPRRCGHFDGKQIMDLDDYLAKLRQVLATRRDLFVIARTDSSDPADIE
                     RRVLAFGEAGADAVLVDGLTSLDSVRRLSAKASRPFCFNQISGGKSPALTLTELRDAG
                     VQVAIYSTPCLFAAQAAIEGAMTDLKNADGSLEGSRVGVKDCTRILSDSLARRAAPQI
                     TVQASDSGKTAK"
     gene            7444..8715
                     /locus_tag="VIS53_03005"
     CDS             7444..8715
                     /locus_tag="VIS53_03005"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY5766787.1"
                     /translation="MENVLPILVADAPDALTELCGVNLVERLLRILQRLGFRRAIVFS
                     STPEIIGAELAKRSWAREQITAQLVPTAAKPITAHWILEQGQTARFLIVPANDYCDAR
                     LLAALAARNSPTVLVDSNPPQFVQHLIQNPSGPVLVTRDFLLTCSDSAPVVEELKQKI
                     GAREIDALDAAKVDDYIVSMRRHVRPLCFRSPQEQDRRLIERVILDSAQNGTLDLPAY
                     LHAPIETAIISLLCKTRITPNQITIGGFVIGCSATAAFLGGRVGLGIITALLFGIVDG
                     LDGKQARVKIETTERGKWEHELDYLIENSWWLAIGFNLWKSGQFPNVFYFLALLIASH
                     LLAGFAKRRVKIARGRLLDDVAPFDRAFRLIAARRNVYVWVLAGGFLLGTFPQSYAII
                     CGWAAVSATVHLMRSVWICNVLRRRVVDSRA"
     gene            complement(9259..9729)
                     /locus_tag="VIS53_03010"
                     /pseudo
     CDS             complement(9259..9729)
                     /locus_tag="VIS53_03010"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
     gene            9883..11457
                     /locus_tag="VIS53_03015"
     CDS             9883..11457
                     /locus_tag="VIS53_03015"
                     /inference="COORDINATES: protein motif:HMM:NF024832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HEY5766788.1"
                     /translation="MPDKVEIAQAPRLRKGSVSPRRVALAVAPPSADASAREDKTGVE
                     LKRGAFLNTIAMLASNFRGIFTFLVARLLGPAALGTFSVAWANVDLVSKIAVFGLDNA
                     ITTFIARSQATRDFARSRTLFRAAVVLVLLQSCLVAAIAIAALQLFGHRLRFPSEMIS
                     ALAFVLCALPGISLYRVCTSVSRGMKVMKHDIFSRGVTESAITTLALLIALGFGFTRF
                     APEVAAVSGTAASGIVALIFASRLFSGVTARDTVSIWTEAKPLLAYGAPISLYQMFNA
                     FTLRLDVIMLGWFIGRAPGVTLATVGVYSAVVGLAGGLRKVNQAFNPIFAPVVAGMTA
                     TGDQQRAAATYARLAEWMLWILLPLVAVMTLAGSAILLIYGPAFMQGGAWLGIVGIAC
                     ATNAFVSLGETVIMVQRPHLNLLNSSVTCAIAFGANLWLIPRFGVTGAAFGILLPYVI
                     QGILRYGVLRLVFRWRNPWSSIRPPILTAIIAIVPALLCRLFLEGIAGQVMAGLVFLA
                     IFGVGWLRYRRLAKPT"
     gene            11421..12260
                     /locus_tag="VIS53_03020"
     CDS             11421..12260
                     /locus_tag="VIS53_03020"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5766789.1"
                     /translation="MVALQTLGQTNVMRRVFLTGASSGIGLAIAKLLVDEGHEVWGTS
                     RNLERIPKMPRCHPVRLDLTDRLSVEHAFNSALAEASYFDVVINNAGAGHFDAAEFLP
                     METIASQFQILVFGQIQLMQLALRHMQARGEGLVINVTSLASRLPVPFMAAYNAAKAA
                     LASFTMSIQLELGNSRVHVVDLQPADIRTEFNQGVIKSTKTNPRYDIKVARTWEVVER
                     NMKSAPAPDLVAKHVLRLVSAVRPPPRVTVGDMFQSKIAPLIFRFLPQRLRLWGLKRY
                     YQI"
     gene            12230..>12954
                     /locus_tag="VIS53_03025"
     CDS             12230..>12954
                     /locus_tag="VIS53_03025"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEY5766790.1"
                     /translation="MGIEEILSDMIAISEAVILMAGEGSRLRGSDSTFLKPFVPVLGR
                     PLISYALDTLIRAGITRVNFVVGYESARMIGQVKQLIPSGLSASFIENRDWQKQNGIS
                     LLAAAGHVSKPFLLTMSDHLFDDAVVNHLLDSSEPGFLNIAVDRKLDSIFDLEDAMKV
                     QTSGDRIADIGKNLRHYDAIDTGLFVCPVETFDYLERAKSGSSRSDCSLADAVQLMAS
                     DNNVRAIDIEDAWWQDVDTPQML"
BASE COUNT         2773 a         3627 c         3602 g         2952 t
ORIGIN      
        1 ggggatcgag atgagcgcac aaattagtct gagttgcgac cggattgaac gctacctcgg
       61 cgaagaagag gaacgcgtgc acgccctgcg cggtgtgtcg cttgagatcg agactggcag
      121 cgttcacgcc gtggtcggcc cgtcgggctg tggcaaaagt tcgttactct atattctcgg
      181 tttgctcgat acaccggacg ccgggcgtgt tgcgatcgaa accgaagcgg tatcccacct
      241 aagcgacgat gaactcgcgc agaagcggaa caaattcatc ggtttcattt ttcaattcca
      301 tttcttgatg gaggacttca ccgcgcagga aaatgtgatg atcccgatgc gcaagcttgg
      361 cgagctctcg gatgcgcaga tgcgcaatcg cgctgccgag ttgcttgacg gcgtaggctt
      421 gggcgacaag gtgcgacggc ccagtcgtca tctttccggc ggcgaacaac aacgcgtcgc
      481 tatcgcacgc gcgctagcaa acgatccgcg cgtcattctc gcggatgaac cgaccggcaa
      541 tctcgacacc gcaaactccg agcgcgcatt tgggttgttg cagaatcttg tgcatgaacg
      601 cggcaaggcg ttgctcctcg ccacgcacaa tccggcgatt gccgaagcgt gcgattggat
      661 ccacgaaatg aaagatggcc gaatcgtcgc tagccatcct cgtggcattc ggagttcaag
      721 catttaggaa cgctgacttg ccgccaactg gggaggactc aacggctccc gcagctggtc
      781 cctcgcggca tttccagatt cattagcggt gtcgttcagg tgccacgaac cgcccgcgcc
      841 ggtgctaacg atgacaagca gccagatcac gagattcagg aaagtccaga agtagatctc
      901 ttcgccgcag agctcgctca ggccgcctgt gttgaaaagg gaaagtccaa gcgcgcaaac
      961 tgccagcatt agttcgcgcc accatccaaa ctgagcgaga cgtagcgcca acctcgctcc
     1021 accacttgcc accaacacaa cgaaaaagac tggcaaaaga ataaagaagt acttgagcac
     1081 gacccaggca atcaattgcg gcgcccgaaa cacttcctgc tgaaaaggaa tgattttttc
     1141 cgaggcaaat cgaaagtcaa cgtgactaag tgcgaatcca ttcaggacga agtgaaagac
     1201 cgtgaagaac atgattgcgc tgacgagcgc cgaccaattc accgagagtc cagctctgcg
     1261 gaaaagttcg agacaaccag ccaaccagat gccgcccaaa acagagccga tcagttttcc
     1321 cgtctcaaac tggaacaggg caatcccgag aaatatccag atcgcgaata aaaacatccc
     1381 ccgtggccaa ttgattcggc gatttcgccc gaagtggaaa gcgtacaacc aaatcagccc
     1441 gacgactgcg caaatggtga cattgaccgc gagaggcatc gcagaaattc gatctaaaaa
     1501 gggaaaagaa atagtatagg attcggtgcg aaaagtgacg aagggcacca gagcgaaccc
     1561 gaaaagcgtg gggacagaaa tcaggattcg ccatccgctg gcgacgatga ttgcgattgg
     1621 cgtcaggatc atgagaacga ttattgggcc gcggccggtc agggcgtact tatagggtcc
     1681 aaagtaagtt aggagccaga tcgcaacgcc gatcatccac agaacttgtg tgatacgttg
     1741 acgtaacgtt cgagccccgg acgtgaacga aaaaacaacg ccggctagcg ctgcgaccgg
     1801 ataaaatact gaccagccga tcggctggtt aggcttcgtg tggaaccacg cagcaccgct
     1861 tgggagcagc caaaacgcga acgtagcaag cagcgcgagc aaacaaagcg cggccagggt
     1921 gcgcacgaca cccaaatggc ggatgcacca gaaaagcgcc gcgattgagg ccagccaggc
     1981 tccggacgcg aaccctgcga ttccgagaag aattccaaaa gcaagaagga cgagggcaat
     2041 caggtcggcg cgatcgggac ggatcgtagc gcgagaacgc gattgaaatt gagaaagaag
     2101 aaaaagcgcc gcggccagaa tccatggcgc cacccgtcgg accacctcga tcgcatgctg
     2161 atgatgcgct tcgtctcgat tttgcatgac atgtgtattc agctgcgctt ccaatgtgtc
     2221 actggagagc ccccgttcgg gaactcgcga tatctgcgct tgagcgtgaa ggaatgtttg
     2281 gcgaagctcc accggcaaga gcgtcaggtc cgttcgaaag gcgccctcgt actcatctgg
     2341 aagggcgagg gcatatggca cactcagcag aaacagcatg tcggcctggt cgaggtcttc
     2401 atgtttgccc tgcggaaata gagggccatg cgcgatgtaa gcggcgtctt gggtatggcc
     2461 gccttgctcg ttgtggccgt gatccccgat gacgtagagg taatccttag gcgtgagccg
     2521 ctcggccacg ctgcgcacga aattatccac ctcgagatat ttttctctgt attcgggtcc
     2581 tcgaacgacg tattgatggg ccaccttgtc cgtcccgatg atgtgaagaa gcaacacgtc
     2641 gatcctcgga tcggccatcc acttatcggt ttgccggtag gcgtacttgt cccgctcaaa
     2701 caacggtacg ttcaaatcct cgtagttcag agaatcgaca aacgccgccg gataaagccg
     2761 attgatggtg tgatctgatg ccacgacaag acgctttccc agcgtggcga gagaatccgg
     2821 ccaagttacc ctcttcgacg cgacggcgga gaaatcttgc aggctcgttc cggtggtggc
     2881 aacgcggccc tcgaagatgc tcttcacgca aggaaacgtc attttcatcg ggcaggcgcg
     2941 ggactctcca aaaagcgacg acgatgtgag ggaacttaca aaaggcatga gagttggatc
     3001 gaaagccatc ggggtaccga cgctgtcgag cagtagtaca acggtgcgga atttttcgac
     3061 ggagtagatc tggcgttgcc cggctgcctt tccttcctct tccggaagag agcgaaaacc
     3121 gcaaataagc aagagcatcg gcacggcgcc gagcaacagc ggtcgttgcc agattgatgc
     3181 ccataatcgc attcgcgcgg acgaaatcac cgctcagatg tagtctgcga acagcgaact
     3241 gtgcaaccaa aacgatcatg aaaatctggg cggacgcgct ggtcttgccc cacgtagtga
     3301 tgtttcataa tgtgcgcgca atgagcgtgg gttctgcgga gattagcatc acaaacggga
     3361 gacgcgggtg acttggaacc gcctgcggca cttgcacaag gagccgccca taatcgaagc
     3421 ctggcttggc ttgtttgggc cgattctgcg ctggctgact ccctcgcgcc gccgacttct
     3481 gctgtgtctc gcagcattgt acatcgcggt taaatattcg ctgcgcaccc tggcgcgcct
     3541 tgggaattcg ttaggcagtg cgccgagtct tgcctacgcg tttctgctcg tcatcgtgct
     3601 cttcgcgttt gtttttctga gctggttcgc agcgaagaac tttgcttcac taccactgtt
     3661 tgttcgccgg cgcccacaaa tttgtctgca cgcgattttc tgggtcttgt tggttgtcgc
     3721 gtggatcacc agacccagtg gcggtccgtc gcaaatcttg cttttcggct ccatttttgc
     3781 gctgccattt cttctctggc gcgtcggcta catgatgttt accgcccagc acggcaagat
     3841 agctgggacc aggtttgccg atcatctttt ctaccttttc ccttattggg gtgggagtga
     3901 tacaccctat ggcaaaggat tcgattatct ggcggcgaat gaagcccgcg atgaagctgc
     3961 gctcgcgaaa tcgcaactgg cgggtctgaa atgtttcgtg ctggccggcc tttgggtcat
     4021 cactaaagct ctcctcgtgg ccactgtgtt tgtcgatggt cgagtgccaa gaatgggagt
     4081 cgcgttcgct aatccggaac tttatccgat ctggctccgc tggatcgcgc tctacctgga
     4141 gctggtttgg tcggtccttt ccattgccgt caccggacat ctcatcatcg gatggctgcg
     4201 cctgttcggg tttcacgtct ttcgcaatac ctacaagccg cttttgtccg aaagcatcat
     4261 cgagttttgg aaccggtact attactactt caaggaactg ctggtgaact tcttcttcta
     4321 cccgattttc acccgacact tcaaaggatc accgcgcctc cggattattg cggccgtctt
     4381 cgccgccgca ttcgtgggca acatgtacta tcactggctg cgcctcgaca atgagctggt
     4441 ggccggcgat ttccgcggaa tgtgggccat cctcgaatcg cgcgtctttt attgtttcct
     4501 gctcgcggtc ggtatctctg tttcgatgtt gcgagagcag aagcgagtga aagccaaact
     4561 gacgcggagc gtcgcgcgtc gtgcagtggc gatattcggc gtatggactt tctttggagt
     4621 cattcacatt tgggcgctaa aagctccggc gccgttcata ttgcggacaa agtttttcct
     4681 tggactgctt agcctgggct agattcgccg tctcaaagtc atgctccttg aactgcaagt
     4741 cggaaacctg atcgagccgt ttagcgaccg ccgctgggat ggcgcagaaa tcaagcgtca
     4801 agtcgctcgc cgcatcattc ggtttcaagc gcgagaatta cggcccggcg atcgggtctt
     4861 tctgccattc ggtaaccgcc ttgagttctt tgctgagctg ctcgccatct ggcagctcgg
     4921 cggttgtgcg atcccaatcg atgcgcgcct gacagcgttc gaagttgaaa atctgagccg
     4981 cattgcaaac ccccggttag ccatagtgga tgaagcgaca ccggcaaact tagcccgcgc
     5041 tctcgacgct gccggcgtcg gcgtgttcga aacaactaaa atcgacaata acgaaggaac
     5101 cgcatctcac atccgtctgg acgacgacgc actgatcttg ttcacctccg gttccaccgg
     5161 cgatccaaaa ggtgttgtcc atacgcatcg ctcgctccgc gcgcgctgga tcggattgcg
     5221 cgatcatctt ccgcccgatg ctttcgcacg ttcgctctgc atgctgccga cacattttgg
     5281 ccatggtctc atctgcaatt gtctctttcc gtggctttcc ggtcacgacc tctacatcac
     5341 acctcccttc cgccccgatc tggtaatgag acttggaaac ctaatcgacg agcacggcat
     5401 tacattcatg tcgtcggtgc cgccgatttg gaaactcgcg ttgaaattag ccaagccccc
     5461 tcagcgcggc tcgttgcgac gcgtgcattg cggctccgct ccgctgtcgg ctgtcgcgtg
     5521 ggacgagatt cgtcagtgga ccggtacgcg tcaggtctgc aacgcctacg gcattaccga
     5581 aaccggaagc tgggtcgccg gtctcgataa cgccgacgtt ccggccaaag atggattgat
     5641 tgggacgggt tggggcgctg tgattcaaat actgcgaacc aacgacagta ctcagccgct
     5701 tcgcgaagaa gatcgctgcg ccattggaga ctcaggttat gtctggctca acacgccagc
     5761 gcttatgaaa ggttattttg gtcgcgacga tctcacgatt aaagcagtgc gcgacggctg
     5821 gttcatgacc ggtgacattg gattgctcga tgatcgcgga cgccttcttc tccgcggccg
     5881 cgagcgagac gagattaaca aaggcggcat gaaaatctat ccatccgata tcgactcggt
     5941 cgtggagcgt tttgagcgcg caaaggatgt ttgcaccttc gcgctcgacg atccgattta
     6001 cggccaggct gtcggtatgg ctatcgtgct agcagataag caagacgaaa cgattcgcgc
     6061 gttgcacgcg cagatgagtc tccagttagc cgaacacaaa atgccatcgc gctggtggtt
     6121 gctcgacgac atcccgcgca catcgcgcgg caagttgaat cgtgacgccg tcaaagccgc
     6181 ttgccaaaag cagtccgcgc tcgatttacc ttcgatcttg ggttccggaa aacgcgcatg
     6241 aatactgcgc gtgacgaaca aaagggaaag ctcctcagct ttctgcggac aattcaaaag
     6301 gccggtcttc caatcgaggg tttaggggag gcggatcctc tcgtcgcttc gggactgatt
     6361 gattccctgg cgattctgca aatcgtcact tacctagaga ccgcatacga gatcgatttc
     6421 tcccttcggg gcgttgaccc ggagcaactc ggctcgattg gcggtattct cgatctaatc
     6481 gaacaggaaa aaaaatgaac gtttcaacgt cgtccgcgca atcacccggc aaccgtatgc
     6541 gcgcagcgct gcgccaaggc cagatcaagc ctttcatcgg agtttacgat gtattttccg
     6601 ccggtctcgc cggtcgacat tacgacgccc tgtttctgag cggctttggt ttcgcagcga
     6661 gcttttacgg tctgcccgac atcggtttca ttacctggtc ggacatggtt tcctacgtcc
     6721 aacgcagccg tacggtcctg ccagcgcacc atcttttagt cgatatcgat gatggctaca
     6781 ccgatccgga tgtagcctgc cacgtcgttt ccgtgcttga agaccagaag cgccctcgcc
     6841 gctgtggtca cttcgatggc aagcagatca tggatttgga tgattacctc gcaaaacttc
     6901 ggcaagttct cgctacacgt cgcgatcttt tcgtaatcgc gcggaccgat agttccgatc
     6961 cagcggacat cgaacggcgg gtcctcgcct ttggcgaagc gggtgccgat gccgtgctgg
     7021 tggacggtct aacgagtctt gacagcgttc gccgactgag cgcgaaggct agccggccgt
     7081 tctgcttcaa ccagatttca ggcgggaaat ctccggccct cactctcacc gaattgcgcg
     7141 acgccggggt gcaggtcgcc atttacagca cgccgtgcct tttcgcagcc caggcggcga
     7201 tcgaaggcgc gatgaccgat ttgaagaacg ctgatgggtc gctcgaaggg agccgtgtcg
     7261 gagtgaaaga ctgtacgcgc atcctttccg atagtctcgc ccgtcgcgcc gcgccgcaga
     7321 ttaccgtgca ggcttcagat tcaggaaaga cagccaaata gcagcgacgt aagaataacc
     7381 aaaccaactg aaacgccgct ggctgttggc agcgcgcggc tccgccgtta atctcgccgg
     7441 gcaatggaga acgtcctgcc aatcttagtg gctgatgcgc ccgacgcgtt gacggaattg
     7501 tgcggcgtca acctggtcga acggttgctc cgtattttac agcgactggg atttcgacgc
     7561 gcaattgttt tttccagcac gccggaaatc atcggagcag aattggcgaa gcgctcgtgg
     7621 gctcgagaac aaatcactgc ccaacttgtg ccaactgcgg ctaaaccaat cacggcccac
     7681 tggattttgg aacaaggcca gacggcgcgc tttctaattg tcccggcaaa cgactattgt
     7741 gatgcgcgtt tgctcgccgc cctggcggcc aggaactctc cgactgttct tgtggattcc
     7801 aatccgccgc agttcgtcca acacctgatc caaaacccga gcggtccggt tttggtgacg
     7861 cgggacttcc ttctgacgtg ctctgacagc gcgccggttg ttgaggagct caagcaaaag
     7921 atcggcgctc gtgaaatcga cgccctggac gcggcgaaag ttgacgacta catcgtcagc
     7981 atgcgccggc atgtgcggcc actttgtttt cgctcaccgc aggagcagga ccgtcgcctg
     8041 attgaacgcg tcattctcga ttccgcacaa aatggaacac tcgacttacc ggcttacttg
     8101 cacgcaccga tcgaaacggc aatcatctcg ctcctctgca aaacgcgaat cacgccaaac
     8161 caaattacga ttggaggttt cgtcatcgga tgcagtgcga ccgcagcttt tttaggtggt
     8221 cgcgttgggc tcggaatcat caccgccctc ttatttggca ttgtcgacgg actggacgga
     8281 aagcaggcgc gtgtcaaaat cgaaacgact gagcgtggga aatgggaaca tgaactcgat
     8341 tatttgatcg aaaactcgtg gtggctggct attggcttta atttgtggaa aagcggtcaa
     8401 tttccaaacg tgttttattt tctcgctttg ctcatcgcgt cgcacctact agctggattc
     8461 gcaaaacgcc gggtaaagat agcgagaggc cgcttactgg atgacgtcgc gccgttcgac
     8521 cgcgctttcc ggctgatcgc ggcccggaga aatgtttacg tttgggtttt ggcgggcggt
     8581 tttttgttag gcacgttccc ccaaagctac gcgattatct gcggctgggc cgccgtcagt
     8641 gctactgttc atctcatgcg ctccgtttgg atttgtaatg ttctcaggcg tcgagttgtt
     8701 gattcccgcg cctgacagag ggcgcaacag cgaaggcaca cgctttgccc gcgcgagaat
     8761 ttccttaccg agaacacgca ctggtttttc gaccagtagt gaggcgctaa cagcgcagta
     8821 aacaccgcaa ccttcctgac aggatttctt cttataattg gcgtaaagat cgtccagtgt
     8881 cacgtccatg atgtgcttgt ccgtgtgcac catgctgcaa atccaaaatt ttccctgcgc
     8941 agagacgaag aataatttgt agcctgccgc gcacgtccat tcgacgtgct ccccgcggag
     9001 aaggctgcgc tgataattaa gaatcgcctc gctggtgtga atcttctcgc cacggcgttt
     9061 tcgttcgatc atcgaatcga tgaagcgttc gagctcctca cgtcgcccgc gatctacacg
     9121 aaaccgccgt agcgggtccg catgcacgag gcgaacttct gtcggaattc cgcgcgacaa
     9181 tccggtctct agcactgctt gtgattcggg cagggtatcg gcacaaatca ctccagtgat
     9241 atgcagactg atttttgaat cacggaaata atcgagcttc ggcaaaatcg tcttgaaaga
     9301 tttttttgta attgcactgg gggtcatccg gtcaacgctg atctgcatga cctgcaagcc
     9361 tgcatcttcc agttctgcga cgagcttagg ggtgagaagg aaaccgttgg tggtcaggct
     9421 tgtggcaaag cccagttcgc gacagtagcg cacaagctcg acaatatcag gatgcacgag
     9481 cggctcgccg ccgacgagag cgatgcgcat ggtaccaagc tcgcgaatct tccgcaccca
     9541 tttttttaaa tcgtcgatgc tcggatgcgg ccggctattg tcgtattcgg tgcaataagc
     9601 gcaatcgagg ttgcaccggt ccgttacata aaggctgcat tgcagcggtt tgcggtctaa
     9661 gagacgctta gccgattcca caatgttata gccggaaaat tcgcggcgag cgtgtttaag
     9721 aaacttcatg cagcttgggc caggctcagt atagcgaaaa cgctctttcg acgcaaagat
     9781 gaccgcgggt tgcctccctt gaccgggccc gcgttgtcga tttcagtcaa ctgcctttca
     9841 ccgagagtat tcgccggaaa gtgaatcact gcgctgtttt gtatgccaga taaagttgaa
     9901 attgctcaag cccccaggct tcgcaagggc tccgtgagcc cgaggcgagt tgcgctcgcc
     9961 gttgcaccgc cgtcagccga tgcatccgcg cgcgaagaca agaccggagt cgagctgaag
    10021 cgcggcgcgt tcctgaacac gatcgcgatg ctggcgtcga atttccgcgg catattcacg
    10081 tttctcgtcg cgcggctgct cggaccggcg gcgctcggca cattttcggt ggcttgggca
    10141 aacgtcgatc tggtcagtaa aattgccgtc ttcggactcg ataacgccat cacaactttt
    10201 atcgcccgct cgcaagcgac gcgcgatttc gcgcgtagtc gcactctctt tcgcgccgcg
    10261 gttgtgctgg ttcttctgca gtcgtgtcta gtcgccgcga tcgcaatcgc cgcgctgcaa
    10321 ctctttggcc atcgattgcg gtttcctagc gagatgatct ctgcgctggc gtttgtccta
    10381 tgtgccctgc ctggcatctc gttgtatcgc gtatgcactt cagtttcgcg cggcatgaag
    10441 gtgatgaagc acgatatctt ctcgcgaggc gtaaccgagt ccgccattac tacgctagcg
    10501 cttttgatcg cgctcggctt cggatttaca aggttcgcgc cggaggtggc cgccgtttcg
    10561 ggaaccgcgg cttcgggaat tgtcgcactc atatttgcat cgagactctt cagcggtgtg
    10621 acagcgcgcg acaccgtctc catttggaca gaagcaaaac cattgctcgc atacggcgct
    10681 cccatcagcc tttaccagat gtttaacgcg ttcaccctgc ggctggacgt gatcatgctg
    10741 ggatggttca tcggacgcgc tcccggggtg accctcgcta cggttggcgt ttatagtgcc
    10801 gtggttgggc ttgcgggcgg cctacgcaag gtcaaccaag cgttcaatcc gatctttgct
    10861 ccagtcgttg ccggcatgac tgcaactggc gatcagcaac gcgccgccgc cacctacgct
    10921 cgtctagccg agtggatgct ctggatcttg ttaccactgg tcgccgtcat gacgctcgcg
    10981 ggatccgcga tcttactgat ctacggtcca gcgttcatgc aaggcggcgc ctggctgggg
    11041 atcgtcggaa tcgcgtgtgc cacgaacgcg tttgtgtcgt tgggtgagac cgtaatcatg
    11101 gtgcaacgcc cgcacttgaa cctgctgaat tcttcggtca cctgcgccat agcattcggc
    11161 gcaaatctct ggctgattcc ccgattcgga gtgaccggcg cggcgtttgg cattctgctg
    11221 ccctacgtaa tccaagggat cttgcgttac ggcgtgctgc ggctggtctt tcgatggcgc
    11281 aatccgtgga gtagcatccg tccaccgatc cttaccgcaa tcatagctat cgtcccggcg
    11341 ttgttgtgtc gcttgtttct ggaagggatc gctggacaag tcatggctgg tcttgtcttc
    11401 ctcgcaattt tcggcgttgg atggttgcgc tacagacgct tggccaaacc aacgtgatga
    11461 ggcgagtctt tctcaccggt gcgagttcgg gcattggcct ggccattgcc aaattacttg
    11521 tggatgaagg tcatgaggta tggggtacat cacgcaattt ggaacggatc cccaaaatgc
    11581 cgcgatgcca tccggtgcgt ctcgatctta ctgatcgact ctccgtcgaa cacgcattca
    11641 actccgcgct tgcggaagct agttacttcg acgttgtgat caacaacgcc ggcgcaggtc
    11701 attttgacgc tgctgagttt cttcccatgg aaacgattgc gagccagttt caaattctcg
    11761 ttttcggcca aatccaactg atgcaactcg cactgcgcca catgcaggca cgtggtgaag
    11821 gtttagtcat taatgtcact tcgttagctt cccgacttcc ggtgccgttc atggcggctt
    11881 acaacgccgc gaaagcggcc ctagcatctt ttaccatgtc gatccagctc gagctcggca
    11941 attcccgcgt gcacgttgtg gatcttcagc cggcagacat ccgcacggaa tttaatcagg
    12001 gcgtgatcaa gagcaccaag actaatcccc gctacgacat aaaagtcgcg aggacttggg
    12061 aagtcgtcga gcgcaacatg aaaagcgcgc ccgccccgga tctggtcgca aaacatgttc
    12121 tcagattagt gagcgctgtt cgtccgcccc cgcgggtcac agtcggcgat atgttccaat
    12181 cgaagattgc gccattgatc ttcagatttc ttccgcaacg ccttcggttg tggggattga
    12241 agagatatta tcagatatga ttgctatttc tgaagcggtc atcctgatgg ccggcgaggg
    12301 ctcgcgtcta cgcggatcgg acagcacctt cttaaagccg ttcgtcccag tgcttggccg
    12361 tccgttgatt tcgtacgcgt tagataccct gatccgcgca gggatcacgc gcgtcaactt
    12421 tgtggtcggc tacgaaagcg cgcgcatgat cgggcaggtc aagcaattga ttccttccgg
    12481 cctcagcgcg tcctttatcg aaaaccgcga ctggcaaaaa caaaatggca tctcgctcct
    12541 tgccgccgct ggccacgtca gcaaaccctt tcttctcacg atgagcgacc atcttttcga
    12601 cgatgccgtg gtcaatcatt tgcttgattc ttctgaaccg ggtttcctca acatcgctgt
    12661 agatcgaaaa ctcgattcca ttttcgattt ggaagacgcg atgaaagtgc aaaccagcgg
    12721 agataggatc gccgatatcg ggaaaaacct gcggcactac gatgcgattg ataccggctt
    12781 gttcgtttgt cccgtcgaaa ccttcgacta tctcgagcgg gcgaagtccg gcagcagccg
    12841 gagcgattgc agcctggctg acgcagttca attgatggcc agcgataaca atgtccgagc
    12901 catcgatata gaagacgcct ggtggcagga tgtggatact ccgcagatgc tgaa
//
LOCUS       DATDAJ010000131         2716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_831555, whole genome shotgun sequence.
ACCESSION   DATDAJ010000131 DATDAJ010000000
VERSION     DATDAJ010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831555"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..836)
                     /gene="xth"
                     /locus_tag="VIS53_03030"
     CDS             complement(72..836)
                     /gene="xth"
                     /locus_tag="VIS53_03030"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY5766791.1"
                     /translation="MKIASWNINSLRKRQDRLFAWLEDTQPDIVCLQETKCPDGQFPA
                     LALQAAGYRSAYHGEKSYNGVAIVAKNELHDVRASLCDEVVDPQARVIAATVGQLRVF
                     SIYAPNGQAVGSPAYEYKLQWYRRLRHCVAKEKSADLIVCGDFNVAPEDRDVYDAKLW
                     HGAIMASDGERAGFRDLCSLGLHDTLRIHHKEGELFSWWDYQMRAFEKNRGLRIDAVL
                     TSESLAKNCIASGIDREMRAGKDPSDHAPVWAEFTE"
     gene            complement(901..2277)
                     /locus_tag="VIS53_03035"
     CDS             complement(901..2277)
                     /locus_tag="VIS53_03035"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5766792.1"
                     /translation="MKFTNLTRHTEIGANSYYLEMGRHRLLLDCGMHPKNTGEDALPN
                     FKAIGDREVEAILMSHAHQDHIGTLPLAMRRFPGAQIFMTEATADVGSVLLHNSVNVM
                     TRQREEIGEMSYPLFTHREIDRASKRWRWCPMRQRISITGERAIEREKDTLAFEFFDA
                     GHVLGSTGVMLRAEGETVFYTGDVNFDDQTIMQAAVFPEEKIDVLIMECTRGDHAKPE
                     GWTRASEEQRLAEALVAAFERDACVLIPVFALGKTQEVLAMLYKFRRQRLLPEFPIYI
                     GGLSSKFTDIHDRRMHTTRRQLPRLKLMREVAPFILNDETVRDTPVRGGRVYVLSSGM
                     MIPKTLSNVFARRIIEDPQHSIFFVGYANPESPAGVLRETGQGGEVALDPDKPPQRIR
                     CNIEQFQFSAHATRESLIDYAQKISPKKILLVHGDPPAVEWMRATLSNELSGSEVIVP
                     IPGVELEL"
     gene            complement(2426..>2716)
                     /locus_tag="VIS53_03040"
     CDS             complement(2426..>2716)
                     /locus_tag="VIS53_03040"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEY5766793.1"
                     /translation="LDHYIDHIEHVAKLIGIDSVGIGFDFFEFIYRQWPESRQKELAA
                     KLTTPHFIPDLTNHSHARTLTRRLIERGFSDADIEKILRGNWLRIFEETLNR"
BASE COUNT          581 a          758 c          734 g          643 t
ORIGIN      
        1 agtcgaagaa tcccgtgatg ttagcttaac gtgattccac gggatccctc gacttcgctc
       61 gggatgacac gtcattctgt aaactccgcc cataccggag cgtgatcgga aggatctttt
      121 ccggcgcgca tttcgcgatc gatcccggag gcgatgcagt ttttcgccag cgattcgctt
      181 gtcagaacag cgtctatgcg caggccacga tttttttcga aggcgcgcat ttgataatcc
      241 caccagctga aaagttctcc ttccttgtga tggattcgaa gcgtgtcgtg caagccaagg
      301 ctgcacaaat ctcgaaaacc cgcgcgttcg ccgtccgaag ccatgatggc gccgtgccaa
      361 agcttggcgt cgtaaacatc gcgatcctcg ggagcgacat tgaagtcgcc acacacgatg
      421 aggtcggcgg atttttcttt cgcaacgcag tgtcggagcc gccgatacca ctgcagttta
      481 tattcatagg ccggcgagcc gacggcttgt ccattaggtg cgtaaatcga gaatacgcgc
      541 aactggccga cggtcgctgc gatcacgcgc gcctgcggat cgacgacttc atcgcaaagc
      601 gacgcacgaa cgtcgtgcag ctcgttcttc gcgacaattg ctactccgtt gtacgatttc
      661 tctccgtgat acgccgaacg atagcccgct gcttgcaaag cgagggccgg aaattgtccg
      721 tccgggcatt tagtctcctg caggcagaca atgtccggtt gtgtgtcctc aagccatgca
      781 aacaaccggt cctgccgttt gcgcagcgaa ttaatgttcc aagaggcgat cttcatcagt
      841 gagaagtggc gatttcaatc tacgcccgct cgaccacctc tcaccaagca cttcttactt
      901 ttacaactcg agttccacgc ctgggattgg cacgattacc tccgagccgg aaagttcatt
      961 cgatagtgtg gcgcgcatcc actcgactgc cggcgggtca ccgtgtacga gaagaatttt
     1021 ttttggcgaa atcttttggg cataatcaat cagcgactcg cgtgtcgcgt gtgcgctgaa
     1081 ctggaactgt tcgatgttgc agcggatgcg ttgcggcggt ttatcgggat cgagcgctac
     1141 ttcgccgcct tgacccgtct cgcgtagaac gccggctggc gattctggat tggcgtagcc
     1201 cacaaaaaag atcgagtgct gagggtcctc gatgattcgc cgcgcaaaaa cgtttgagag
     1261 agtttttgga atcatcattc cgctggagag aacgtatacg cgtccgccgc gcaccggggt
     1321 atcgcgcacg gtttcatcat ttaagatgaa cggcgctact tccctcatca gtttcaggcg
     1381 cggcaattgc cgccgagttg tgtgcatacg gcgatcatgg atgtctgtga atttcgagct
     1441 aagaccgcca atataaattg gaaattccgg cagcagccgc tggcggcgaa acttgtagag
     1501 catcgcgagg acctcctgcg tcttacctaa cgcgaacacc ggtatcagca cgcacgcgtc
     1561 acgctcgaaa gcggcgacaa gcgcttccgc taggcgttgc tcttcactgg cgcgagtcca
     1621 gccctcaggt ttcgcgtgat caccgcgggt gcattccatg atcagcacat caattttttc
     1681 ctctgggaaa actgctgcct gcatgattgt ttgatcgtcg aaattgacgt ccccagtgta
     1741 aaaaacagtt tcaccttcgg ctcgcagcat gactccggtt gagccgagca catgtcctgc
     1801 atcgaagaac tcaaacgcta acgtgtcctt ttcgcgctcg atggcccgtt cgccggtaat
     1861 ggagattcgc tgacgcatcg gacaccagcg ccagcgtttc gatgcgcggt cgatttcacg
     1921 atgtgtgaaa aggggatatg acatttctcc gatctcctca cgttggcgcg tcatcacatt
     1981 gactgagttg tgcaacagga cgctgccgac gtccgccgtc gcctcggtca tgaaaatctg
     2041 cgcgcccggg aagcgtcgca tggccaaagg cagagtgccg atgtggtcct gatgcgcgtg
     2101 cgacatcaga atcgcctcga cctcacggtc gccgattgct ttgaaattag gcagcgcatc
     2161 ctctccggtg tttttcggat gcatcccgca atcgagcagc agccggtgtc ggcccatctc
     2221 aagatagtac gaattcgccc cgatctccgt gtgccgtgtg agattagtga atttcaattc
     2281 gttaaagggt tgaagcgtta aaccgtatgc agcgggtcgc gtgcaagaac aaagcgtcgc
     2341 cttccccgta gcaaaaactt atgaggcctc gctctttaga atccaccgtt gagtcgaagc
     2401 ggtcggcgtc tgccgctcca acgcttcaac ggtttaacgt ttcctcaaaa atccgcagcc
     2461 aattcccgcg cagaattttt tcgatgtcag cgtcgctaaa tccgcgttcg atcaatctgc
     2521 gggtgagggt ccgcgcatgc gaatggttcg ttaggtcagg aataaagtgc ggcgttgtaa
     2581 gttttgcagc tagctccttc tgtctggatt cgggccactg ccggtaaatg aactcgaaaa
     2641 aatcaaagcc gatcccgacg ctgtcgatcc cgattaactt cgcgacgtgc tcgatgtgat
     2701 cgatgtaatg gtcgag
//
LOCUS       DATDAJ010000132         6234 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_832730, whole genome shotgun sequence.
ACCESSION   DATDAJ010000132 DATDAJ010000000
VERSION     DATDAJ010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6234
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_832730"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VIS53_03045"
     CDS             <1..1015
                     /locus_tag="VIS53_03045"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEY5766794.1"
                     /translation="LAQTELVNLSPQKVLEIGMVQLKAEQEAFADAARKIDPNKPATE
                     VFKQIQSEHPASDKLIPDIAKDLDKLRKYVVGRRVVGIPSEVRAKVKETPQYLRATSF
                     ASMDTPGPFEKRATEAYYYVTPTEEDWPEQEKEEWLTAFNYYTSDVVSIHEVYPGHYV
                     QFLHLNASTASKVEKIFGSYAFIEGWAHYCEKMMIDEGFGSPSNSSPSEDDVKRAAKY
                     RMAQADEALLRLCRLCVSIKVHTQNMSIDEATKFFQDNCYYEQKPARQEAMRATFDPG
                     YLNYTLGKLQILKLRDDYKAQQGDNFSLQKFHNELLSHGMPPIRLLREIMLKDQSKWD
                     QVL"
     gene            1196..4804
                     /locus_tag="VIS53_03050"
     CDS             1196..4804
                     /locus_tag="VIS53_03050"
                     /inference="COORDINATES: protein motif:HMM:NF013245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5766795.1"
                     /translation="MSELVSTMADKIDRTMQRVIPLAYRVRRTGRRLVRRALRKPRSV
                     SEGPNLLPLLIQVLASFTKADGVIMEEEIDSSLGFLRYDYPEAVYSELRQLFRQALYE
                     QQDLAAMAQKLGVQLSTERKIMLGVQLYDLISQAGLKQEQVVAFYSFMSQMGMAAQAI
                     DIVYQLNASEESDPSIYQHGASPLESLSFGGDGKADIILKNLPETDRLMAFRYHDLIL
                     LKNYSGQNVSVRGRPLVRGGFCRIYPGQRILIGDQVLSYQELAQYFNAKKNVSLPEIF
                     IRVTKDAEQVQLERSRTRESALRVTFGLKVRVKALRDIDAELQGVRLKAGTQVDTTLE
                     DKIIFHNDTELDLNDLRRRARALGGRFQLKASKSEYLVSNDPSKLQADDILLSPGTAG
                     DVLLKIFCDYDRRVGTLEVIEADRRIMVGDDPVRTTAELKDGDIIRIDVGQILRCNFL
                     ERIIEEERNIIRSLELNEVTHRFGKGEIGLDGISFSITRGELVCVMGASGAGKSTLMR
                     VLAGQLQPTSGAVLLNGQSLYRNLDVLKQYVSYMPQQDAFDEHLTIGENLQFAAAIRA
                     PHLSRRDRVRRLDAKLIELGLSERRDAVVGSPEKKTLSGGERKRLNIGLDMIGMSDVY
                     LFDEPTSGLSSKDSEHVIEIIRSMAHNKIVIVTIHQPSSKIFQMFQKVILLDKGGRLV
                     FFGAPSDALRYFAEAEHQHQFGAELGACPSCGTTRPEFIFDVLETPLRDLSGDVIYEE
                     NSRGQLVPSRRYSPDFWRDKYEAFRLIQDVKQVSLQHEEADPLPVAPVQRKRLPVRWH
                     VEWTQFRTVLQRAFTSKLRNRANLVITIGVSPVLALLIGTILRYSETGTYDFASAYHI
                     PTFLFLGLIVAMFLGLTNSADDIIRDRPVLQRERNIKVRLSYYVISKTITLGFFALVQ
                     CVLFVLIGNFVLQIRGMFWLDLAIMFLTAMSGVALGLVISSLVADPKTASNIVPLVLI
                     PQIIMGGALIKYEDMNRNLGLVYSFSRWFSEHPTSEKTKKTESKLQVPLICQFIAMRW
                     SYEEMIVAQAKLNPLTKRQDRAHDEIQKLAPKAESLQQRAHLNDLKDVLALLSGLEGP
                     SARDVDRYLKLVDPVIAGKRRFDRSLFKDAKGPVTADQIYVNQKVSDLTSRAEMEQND
                     YRRGNKPNVFFGLEKRYFGISFGVFTFDTVVLIVSTLVLLIVLHFILRKQLEVRGT"
     gene            4815..5948
                     /locus_tag="VIS53_03055"
     CDS             4815..5948
                     /locus_tag="VIS53_03055"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY5766796.1"
                     /translation="MSKTKTKSARLIVAASEQDPDMLYATKFWAPDPFIFLQRNGKRT
                     LVLSDLEIDRGRKQADADEFVMFSEVERELQGKSKKAPPYEKVLAHFLKKRGVRSATV
                     PANFPLGYAEELAANKIRVRSADGFFWPEREAKSDKEIEMMGRALRITEAGLKRAIEV
                     LKASRPGSGKRLGWNGKTLTSELLRAEIDSAVLRAGGVPAGTIVAGGDQACDPHERGH
                     GPLCANSLIILDVFPRDAKTGYFGDMTRTVLRGRANEAQRKLWETVKAGQALALKRIK
                     AGVDGMTIHKAIQELFASRGFPTGVRNGRRVGFFHGTGHGLGLEIHEHPRLQKVVLKN
                     RQVLTVEPGLYYPGVGGARQEDVVVVTKTGCRILSRFPKQLEI"
BASE COUNT         1466 a         1668 c         1738 g         1362 t
ORIGIN      
        1 cctggcgcaa acggagctgg tcaatctttc gccacaaaag gttctcgaga tcgggatggt
       61 gcagttaaaa gccgaacagg aagcattcgc cgacgcggcg agaaagatcg acccgaataa
      121 acccgcgaca gaggttttca agcaaatcca gagcgagcat ccggcttcgg ataaattgat
      181 cccggacatt gccaaagact tggacaagct tcgcaaatat gttgtggggc gtagggtggt
      241 cggaattccg tcggaggttc gggcgaaagt aaaagagacc ccgcaatatc tgcgcgccac
      301 ctcctttgcc tcgatggaca ctcccggtcc gttcgagaag cgcgccaccg aggcttatta
      361 ctacgtcacg ccgacggaag aggactggcc ggagcaagaa aaggaggaat ggctcaccgc
      421 atttaattat tacacctccg acgtcgtatc gattcatgag gtgtatccag gacattacgt
      481 gcaattcctt catttgaacg cgtcgactgc cagcaaagta gaaaagatct ttggtagcta
      541 tgccttcatc gaaggctggg cccattactg cgaaaaaatg atgatcgacg aagggttcgg
      601 cagcccgtcc aactccagtc caagcgaaga cgatgtgaag cgcgcggcaa aatatcgcat
      661 ggcgcaggct gacgaagcgc tgcttcgtct ttgccgtcta tgtgtgtcca ttaaggtgca
      721 cacgcaaaac atgtcgattg atgaagcgac gaaatttttt caggacaatt gttactacga
      781 acagaagccc gcgcgccagg aagcgatgcg cgccacattc gatccgggtt atctaaatta
      841 cacccttggt aaattgcaga tcctgaaact gcgcgacgat tacaaggccc aacagggcga
      901 caatttctct ctgcaaaaat ttcataacga attgctcagc cacggcatgc cgcctattcg
      961 tcttctccgg gaaatcatgc tcaaagacca gagcaagtgg gaccaggtat tgtaacgcag
     1021 gcatcttgct tgccgggtcg agcaggcttc cagcctgccg acaacaacgc gttatagctt
     1081 ccgtctcctc agcgcatatc gaccaacgat ttgcgcagcg cacgcgcacc aatcggtgcc
     1141 gcattgcatt gcgtctcttc gcgctttcgc gtaacattcg catccgaaaa tcatcatgag
     1201 cgaattggtt tcaacgatgg ccgataagat cgaccgcacg atgcagcggg taatcccgct
     1261 ggcgtatcgg gtgcgacgaa ctggccgtcg gctcgtgcgt cgggcattgc gcaagccgcg
     1321 cagtgtttcg gaagggccga acctcctgcc gttgttgatt caggtgctgg cgagtttcac
     1381 caaagccgac ggcgtcatca tggaggaaga gatcgactcg agcctcggct ttctgcgtta
     1441 cgactatccg gaagcggttt actccgagct gcggcagttg tttcgccagg cgctttacga
     1501 gcaacaggac ctcgcggcca tggcgcaaaa actcggggtg caactaagca ccgaacgcaa
     1561 gatcatgctc ggggtgcaat tgtatgatct catctcgcaa gcgggtttga agcaggaaca
     1621 agttgtcgcg ttctattcgt tcatgtcgca gatgggcatg gctgcgcaag cgatcgacat
     1681 cgtttatcaa ctcaacgcat cagaagaatc tgacccgtcg atttaccagc atggcgcgtc
     1741 gccgctcgaa tcgctctcgt tcggggggga cggcaaggcg gacatcatcc tgaagaacct
     1801 gcccgagacc gatcggctga tggccttccg gtatcacgac ctgattcttt tgaaaaatta
     1861 cagcggccag aacgtctccg tccgtggaag acctttggtg cgtggcgggt tttgtcgaat
     1921 ttatcccggc caacggattt tgatcggcga ccaggtgctc agctaccagg agctggcgca
     1981 atatttcaat gccaaaaaga acgtttcgct tccggaaatc tttatccggg taactaagga
     2041 cgcggagcaa gtacagttgg agcgttcacg aacgcgtgaa agcgcgctgc gagtcacctt
     2101 cggactcaaa gtgcgggtca aggcattgcg cgatatcgat gcggagctcc aaggagtacg
     2161 cctcaaagcc ggcactcagg tagacacgac actggaagac aaaattattt tccacaacga
     2221 caccgagctg gacttgaacg acctgcgtcg gcgcgcacgc gcgctcggcg ggcgattcca
     2281 actgaaagct tcgaaatcgg aatacctggt gtcgaatgat ccgagcaaac tgcaagccga
     2341 cgatatcctg ctctctcccg gtacggccgg agatgtgctg ctgaaaatat tttgcgatta
     2401 cgatcggcga gtaggcacgc ttgaggtcat tgaagcggac cgtcgaatca tggtgggcga
     2461 tgacccggtc cgcacgaccg cggaactcaa ggacggcgac atcattcgaa tcgatgtcgg
     2521 acagattctg cgatgcaatt ttttggagcg catcatcgag gaggagcgaa acatcattcg
     2581 cagcctcgag ctgaatgaag tcacacaccg ttttggcaaa ggcgaaattg gtctcgatgg
     2641 aatttccttt agcatcacgc gtggagagct tgtttgcgtg atgggcgcaa gcggtgcggg
     2701 caaaagcacg ctgatgagag tgcttgcagg gcagctccag ccgacgagtg gcgcagtctt
     2761 gctcaacgga caatccctct accgaaacct cgacgttctg aagcagtacg tcagctacat
     2821 gccgcaacag gacgccttcg acgagcacct caccattggt gagaatttgc agtttgcggc
     2881 ggcgatccgt gcaccacatc tctcgaggcg cgaccgcgtc cggcgattgg acgcaaaact
     2941 gatcgagctc ggtctaagcg aacgtcgcga cgccgtagtc ggcagtcccg agaagaaaac
     3001 attaagcggc ggcgagcgaa aacggctcaa catcgggctc gatatgatcg gaatgtcgga
     3061 tgtttatctg tttgacgaac cgacttccgg tctctcctcg aaagattccg agcacgtaat
     3121 cgaaatcatc cggagcatgg cgcacaacaa aattgtcatc gttaccattc atcagccgag
     3181 ctcgaagatc ttccagatgt ttcagaaggt gatcttgctc gacaagggtg ggcggctcgt
     3241 gtttttcggc gcgccttccg atgccctgcg gtatttcgcc gaagcggaac atcaacacca
     3301 attcggtgct gaactgggcg cttgtccatc ttgcggaacg acccggccgg aattcatctt
     3361 cgatgtgctg gagacgccgc tgcgcgattt gagcggcgac gtcatctacg aggaaaacag
     3421 ccgtggccag cttgtcccgt cgcgccgtta ctcaccggat ttttggcgcg ataaatatga
     3481 agcgttccga ttgatccagg acgttaagca agtctcactg caacatgagg aggccgaccc
     3541 gttgccggtc gcaccggtgc aaagaaagcg gttgccggtg cggtggcacg ttgaatggac
     3601 tcaatttcga acggtgctgc agcgtgcttt cacgagcaaa ctacgcaacc gggcgaatct
     3661 cgtgatcacc ataggtgtct ccccagtgct ggcactgcta attggaacaa tcctgcggta
     3721 ctcggagacc ggtacctacg attttgcttc ggcttatcat atcccaacgt tcttatttct
     3781 cggtctgatc gtcgcaatgt ttctcgggct gaccaacagc gccgatgaca tcatccggga
     3841 tcggccagtc ctgcaacgcg agcgcaatat caaggtgcgc ctttcgtact acgtaatctc
     3901 caagacgatc acgctcgggt ttttcgcgct cgttcaatgc gttcttttcg tgctcatcgg
     3961 caatttcgtt ttgcaaattc gcggcatgtt ctggctcgac ttagctataa tgtttctcac
     4021 tgcgatgagc ggcgtagccc ttggtctcgt tatctcgtct ctcgtggcgg acccgaaaac
     4081 agcgtccaat atcgtcccgc tggttttgat tccgcagatc atcatgggcg gcgcgctcat
     4141 caaatacgag gacatgaacc ggaacctcgg cctggtttat tccttttcgc gctggttttc
     4201 cgaacatccg acctcggaaa agacgaaaaa aaccgagagc aagctacagg tgccacttat
     4261 ctgccagttc atcgccatgc gttggtcgta cgaagaaatg atcgttgccc aggccaagct
     4321 caatccgctt acgaagcgcc aggaccgcgc gcatgacgaa atccaaaagc tcgcgccgaa
     4381 agctgagtcg cttcagcagc gagcgcatct taacgacttg aaagacgtat tagcactgct
     4441 ctcgggattg gaaggaccgt ccgcgcggga cgtcgatcga tatctaaaac tggtcgatcc
     4501 agtcattgcg gggaagcgaa gattcgaccg ctcgttgttc aaagacgcga aggggccagt
     4561 tacagcagac caaatctacg tgaaccagaa ggtgtcggac ctgacctcaa gagccgagat
     4621 ggagcagaat gactaccgcc gcggcaataa gccaaatgtg ttcttcggtc tcgaaaaacg
     4681 ctatttcgga atctcgttcg gagttttcac tttcgacacg gtagtgctga tcgtgtccac
     4741 actcgtactg cttatcgtgc tgcacttcat cttgcgaaag caactggaag ttcgcggaac
     4801 ctgattcgga ttttatgagc aaaacaaaaa ctaaatctgc acgcctcatc gtcgctgcga
     4861 gcgagcaaga tccggacatg ctttacgcga cgaagttttg ggcgcctgat ccgtttattt
     4921 tccttcagcg caacggcaaa cggacgctgg tcctgagcga tctggaaatc gatcgcggcc
     4981 gaaagcaagc cgacgcggat gaatttgtaa tgttcagcga ggtcgagcgc gagttgcagg
     5041 ggaagtcgaa aaaggcgccg ccgtacgaaa aagtgttggc ccattttctg aaaaaacgag
     5101 gcgtgagatc ggccactgtg cccgccaatt ttccgctggg ttacgcagag gaactcgcgg
     5161 caaataaaat ccgcgttcgc tcggccgacg gatttttctg gcctgaacgt gaggccaaat
     5221 ccgacaaaga gattgaaatg atgggacgcg ccttgcggat cacagaagct ggactcaagc
     5281 gcgctattga agtgttgaaa gcgtcaagac caggttcggg aaaacgactg ggctggaatg
     5341 gtaaaacgct cacttcagaa ttgttgcgcg ctgaaattga ttccgcggtt ttgcgcgcag
     5401 gcggcgttcc ggccggcacg atcgtggccg gaggcgatca ggcttgcgat ccgcacgagc
     5461 gcggccacgg cccgctctgc gcgaattcgc taattatttt ggacgtgttc ccgcgcgacg
     5521 cgaagaccgg atacttcggc gatatgaccc gcacagtgtt gcgggggcgc gcgaatgaag
     5581 cgcagcggaa actttgggaa acggtgaaag cagggcaagc cctcgcgctc aagagaatta
     5641 aggccggcgt tgacggcatg acgattcaca aagctattca agaacttttc gccagtcgcg
     5701 gtttccccac cggagtgcgc aacggccggc gcgtcggatt tttccacggt actggtcacg
     5761 gcctcggcct ggaaatccac gagcatccgc ggctgcaaaa agttgttctg aagaatcggc
     5821 aggtgctcac agtcgaaccg ggtctgtact atcccggtgt gggcggtgcg cgtcaggaag
     5881 atgtagtagt cgtcacgaag acaggttgcc gaatcctctc gcgctttccg aagcagttag
     5941 agatctaggt ggaacgcgtt gtcatggatt cgcctcgtca aacgtttcca tcgtcttcgg
     6001 gagaagccga tccacctcca aatgaacgcg caatgccatt aggagtctaa atctcctacc
     6061 cggcgaagtg acaagtcggc ctgccgcgat aaattattac ccacatgtat cctttattgg
     6121 gttttgtttt gggatctagc tggctgctct atgtcggcag cccatacggc tttggtttgg
     6181 gttccaactg gctgctctac atcggcgtcc cgttgatcat tggaatttgg gcac
//
LOCUS       DATDAJ010000133         8539 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_836461, whole genome shotgun sequence.
ACCESSION   DATDAJ010000133 DATDAJ010000000
VERSION     DATDAJ010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8539
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_836461"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(79..606)
                     /locus_tag="VIS53_03060"
     CDS             complement(79..606)
                     /locus_tag="VIS53_03060"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5766797.1"
                     /translation="MQVETKRLILRSFREEDVDAMGQLFANPDFMRFSLGAFTERKKT
                     VDFIEKVMGWDLAGLPSQFAVVLRGDAAVIGYCGFHHHPEVPGEIEIGYRLHPDYWNR
                     GLITEAARAVRDHAFADLKLPRAISLIHPENIPSRRVAEKNGMKIEKEITFRGFPTLV
                     YAITREQWLANRDVS"
     gene            670..1311
                     /locus_tag="VIS53_03065"
     CDS             670..1311
                     /locus_tag="VIS53_03065"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEY5766798.1"
                     /translation="MRKVEEEYARPAQPPDTSSLATMREAAAHCTACHLYKRATQTVF
                     GEGPKRAAMMLIGEQPGDYEDVTGKPFVGPAGKIMDRALADAGIDRSQVYVTNAVKHF
                     KWEPRGKRRIHQKPNSREIAACRPWLEAELRIVKPNLVVAMGATAAQAMFGPGFRVTR
                     ERGKVLSSKLAPRVLATVHPSSLLRQPDEESREREYKHFVSDFRAALRAAGEE"
     gene            complement(1456..2649)
                     /gene="tgt"
                     /locus_tag="VIS53_03070"
     CDS             complement(1456..2649)
                     /gene="tgt"
                     /locus_tag="VIS53_03070"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEY5766799.1"
                     /translation="MQNDFQLLASDQHSKARRGRLKTAHGMIDTPAFMPVGTQGSVKG
                     VSPRELRELNAQIILGNTYHLFVRPGLDVIKYFGGLHNFMSWDGPILTDSGGYQIFSL
                     VKLRKITEEGVEFQNHIDGARAFISPEIAMEIQAALGSDIAMVLDECVPYPCEYDYAA
                     KSAELTARWAKRCRQWKEENAERPTPNAQRPTEESEISNQQSAIDCQLFFGIIQGGTF
                     DDLRKQSAQQIVDLNFDGYAIGGVSVGEPEEEMMRAVESAEPFLPADRPHYAMGLGTP
                     PQMLEMVARGMDMFDCVLPTRLARNGTAFTAAGTLNLKNAEFALDKRPIEENCACPAC
                     REFTRGYIRHLIKAEEILGLRLITLHNLHFYLNLMSQARTEIEGGTFNQFRNGFVAEY
                     KTRIA"
     gene            2846..3271
                     /gene="rpsL"
                     /locus_tag="VIS53_03075"
     CDS             2846..3271
                     /gene="rpsL"
                     /locus_tag="VIS53_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY5766800.1"
                     /translation="MPTINQLIRKGRQKVSVKSKSPALAGCPQRRGVCVQVMTRTPKK
                     PNSALRKVAKVRLTNGQEVIAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGTL
                     DALGVDGRRRGRSKYGAKRPKGGAAGGGGAAKAAPAAAK"
     gene            3302..3775
                     /gene="rpsG"
                     /locus_tag="VIS53_03080"
     CDS             3302..3775
                     /gene="rpsG"
                     /locus_tag="VIS53_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY5766801.1"
                     /translation="MSRRRRVHKKEEHVDSRYGSQAVARLITTVMERGKKSLAERVVY
                     TAIDKSREGSDSVDPLEIVNKAIENVRPRLEVRSRRVGGATYQVPMEVTPARQISLAT
                     RWIVKFADGRKGLKLADALAQELKDAAAGQGNAIKKRDDTHKMAQANRAFAHFRW"
     gene            3781..5961
                     /gene="fusA"
                     /locus_tag="VIS53_03085"
     CDS             3781..5961
                     /gene="fusA"
                     /locus_tag="VIS53_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY5766802.1"
                     /translation="MATATMEQKKTAAKNPNSPDRKFPLERTRNIGIAAHIDAGKTTI
                     TERVLFYTGMIHKMGEVHEGTTVTDWMEQERERGITITSAATTCTWSQRKEEGVYKMF
                     EGVKERVNIIDTPGHVDFTAEVERSLRVLDGAIAVFDGVAGVQPQSETVWRQATKYDV
                     PRLAFINKMDRVGADFEMSVDSIHKKLGANAWPVLLPLGREDQLRGQLDVINKKAIIY
                     SDNDQLGSTYEVTDVPKEHLGAVEKARNELIQQVSNLDDEVAEAVLEEREVTPELLKA
                     GIRRQTIANKFVPVIGGSALKNIGIQYLVDAVIDYLPSPLDIPPAKGQNPDTGEPMEA
                     MTDDNGEFCSIAFKLWSDPFVGKLVFFRVYSGTLSKGDTVYNPRTNKRERISRLIQIQ
                     ADKREDIETCYSGDIAAIVGIKNITTGDTLCDEDHPILLEPPSFPDPVISMAIEPKTK
                     LDQEKMATALQRLAEEDPTFRVYTHEDTGQTIIAGMGELHLEIIRDRMFREFKVDANA
                     GKPQIAYRETITASAHGVGKLIKQSGGRGQYGHVEVDVRPGARGNGLTVENKIVGGVI
                     PREYIPAVKKGIDEAVLNGVLGGYPVVDVEVDIVYGSFHEVDSNELAFKMASIFAMKD
                     GFRQGKPILLEPIMKVENITPEEYQGDICGDLSRRRGAINSIETRGNMVIIHALVPLA
                     ELFGYATAIRSLSKGRSSYSMEPSSFEPVPANLVAAILDQKEAK"
     gene            5958..6269
                     /gene="rpsJ"
                     /locus_tag="VIS53_03090"
     CDS             5958..6269
                     /gene="rpsJ"
                     /locus_tag="VIS53_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEY5766803.1"
                     /translation="MSNGQRIRIRLKAFDHRMLDQSAIEIVDTAKRTGARVAGPIPLP
                     TLIEKFTVNRSPHVDKKSMEQFEIRTHKRLLDIIEPTAKTVDELKKLNLPAGVDITIK
                     I"
     gene            6307..7032
                     /gene="rplC"
                     /locus_tag="VIS53_03095"
     CDS             6307..7032
                     /gene="rplC"
                     /locus_tag="VIS53_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEY5766804.1"
                     /translation="MSIGLLGQKIGMTSVYDEKGRLCPVTVIVAGDNVLLRRLTEDNE
                     GYSAVQIGFGVQKESRVSKALVGEFKKAGVEPQRLVREFRLQNDLPEGDVNLSVTQFQ
                     PGDFVDVIGRSKGKGFQGVMKKHNFAGQGAAHGSKTHRRIGAVGNRSTPGRIWKNQGM
                     PGHMGDRRVTVQNLQVMQVREAEKIILISGAVPGANGSYVIVRPAIKHPEHLLALHAE
                     HRKHEEEEKAKKPKTLREMAQKK"
     gene            7029..7637
                     /gene="rplD"
                     /locus_tag="VIS53_03100"
     CDS             7029..7637
                     /gene="rplD"
                     /locus_tag="VIS53_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEY5766805.1"
                     /translation="MSAKVLSKAAAKEAKIDLIEDGRGTQAVHDAVVAMRAARRSGSA
                     NTKSKAEVDLSGAKPWRQKGTGRARAGYKSSPIWRGGGVVFGPKSRDYSKKVGKSVRR
                     LAFRKALSERINAGDVLTIDKFVVSELKTKAFIDFLKKQTDAKRVLIVSDSFDEKTYK
                     SARNVKPVKLSTAADVNTEQLLAFQKILVTQKALEKLAERTR"
     gene            7634..7912
                     /gene="rplW"
                     /locus_tag="VIS53_03105"
     CDS             7634..7912
                     /gene="rplW"
                     /locus_tag="VIS53_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEY5766806.1"
                     /translation="MNEHDIIKTASLTEKSTLMSEKQNKYVFRVSPKANKIQIKNAIE
                     RLFQKTVVNVNTCNYAGKEKRLRGPLGRRPRWKKAIVTLKEGDKIELV"
     gene            7924..>8539
                     /gene="rplB"
                     /locus_tag="VIS53_03110"
     CDS             7924..>8539
                     /gene="rplB"
                     /locus_tag="VIS53_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY5766807.1"
                     /translation="MALKEFRPLTPTQRFKSLPAFDEITKWRPEKSLLQPKKRSGGRN
                     NRGRLTSRHIGGGHKHKYRKVDFKRRKYGVAAEVIGIEYDPNRSARIALIKYADGELS
                     YILAPNGLQVGATVNAGNDVAPDLGNSLPLRAIPLGTSVHNIELTPGRGGQVARSAGQ
                     QATLTALEAGYALVKMPSGEIRRIHGNCFATIGQVGNVDHMNVSS"
BASE COUNT         2040 a         2219 c         2520 g         1760 t
ORIGIN      
        1 cgagctttgg gaaatcgatt ctagaatacg cttcgagtag ccctgccgcg caggcttatc
       61 gggcgctggc gcgcgagttc atgaaacgtc acggttcgcc agccactgtt cgcgggttat
      121 cgcatacacc agcgtcggaa aaccgcgaaa cgtaatttct ttttcgatct tcattccatt
      181 tttctccgcc acgcgacgtg acgggatatt ttccggatga atcagcgaaa tcgctcgcgg
      241 cagttttaaa tccgcaaagg cgtgatcgcg cacagcgcgt gcggcttcag tgatgaggcc
      301 gcggttccag taatcgggat gcaatcgata cccgatctcg atctctcccg gcacttcagg
      361 atgatggtgg aaaccgcagt aaccaatgac agcggcgtcc ccacgcaaca cgacagcaaa
      421 ctgcgacggc aaaccggcga gatcccaacc catcaccttc tcgatgaaat caacggtctt
      481 ttttcgttcg gtgaaagcgc ctaacgagaa acgcataaaa tcaggatttg cgaataattg
      541 ccccatcgca tcgacatctt cttcgcggaa ggaacgcagg atgagtcgtt tcgtttcaac
      601 ctgcataggg ttctatggcc tgcggcactg caactgcaat gtagatgatt ttcgattcct
      661 ttattaaaga tgcgaaaggt cgaagaggaa tacgcgcgac cggcgcagcc gccggataca
      721 tcaagtctgg ccacgatgcg ggaagcagca gctcattgca ctgcatgtca tttgtacaaa
      781 cgagcgaccc aaactgtttt tggtgaaggg ccgaagcgcg cagcgatgat gctgattggc
      841 gaacagccgg gcgattacga agatgtcacg ggcaaaccat tcgttggtcc ggctgggaaa
      901 atcatggatc gcgcgctcgc ggatgctgga atcgatcgat cgcaggttta cgtgaccaac
      961 gcggtgaaac attttaagtg ggaacctcgt ggcaaacggc ggattcatca gaagcctaac
     1021 tcgcgcgaaa tcgcagcgtg ccgtccctgg ctggaagcgg aactgcggat cgttaagccc
     1081 aacctcgtcg tagcaatggg tgcgacggcg gcacaagcca tgtttggccc gggattccgc
     1141 gtgacgcgcg agcgcggcaa ggtgttgtcc tcgaagctgg cgccaagggt gctcgccact
     1201 gttcatccat catcgcttct tcgccaaccc gacgaggaat cgcgcgaacg cgaatacaag
     1261 catttcgtgt cggattttcg cgctgcatta cgcgcagctg gcgaagaata acggttctgt
     1321 catgttgagc gaagtcaaga catcccgcat tacctgagag ctctgccgcg ggattgaaag
     1381 cctggccgcg cggacttcgt ccgctgcgtt gcagcctcga ctccgctcgg aatgacgatt
     1441 tgttagacgc tttaatcagg cgatcctcgt tttgtattct gctacgaatc cgttacggaa
     1501 ctgattgaat gtcccgcctt cgatctctgt gcgcgcctgg ctcatcaggt tcaaataaaa
     1561 atgcaaattg tgcagcgtga tcaggcgaag cccgagaatt tcctccgcct ttatgagatg
     1621 gcgaatgtag ccgcgcgtga actcccggca ggcgggacac gcgcagtttt cttcaatggg
     1681 ccttttgtcc agcgcgaact ccgcgttctt taaattgagc gtgcctgcgg ctgtgaatgc
     1741 cgttccattt cgggcgaggc gcgtcggcag cacgcaatcg aacatgtcca tcccccgcgc
     1801 gaccatttcc aacatttgcg gtggcgtgcc gagccccatt gcgtaatgcg gcctgtccgc
     1861 aggcaaaaat ggttccgccg attcaaccgc acgcatcatt tcctcctctg gctcgcccac
     1921 gcttaccccg ccaatcgcgt agccgtcgaa attgagatcg acaatttgtt gcgcgctttg
     1981 cttccgcaga tcgtcgaatg ttcccccttg aattattccg aagaagagct ggcaatcgat
     2041 tgctgattgc tgattgctga tttctgactc ttcagttggg cgttgggcgt tgggcgttgg
     2101 gcgttcggcg ttttcttctt tccactgccg gcatctcttt gcccaccgcg ccgtcagctc
     2161 agcgctcttc gccgcgtaat cgtactcgca cggatacgga acgcattcat cgagcaccat
     2221 cgcaatgtcg ctgccgagcg cggcttggat ttccattgcg atctccggag aaatgaatgc
     2281 tcgcgcaccg tcgatgtgat tttggaattc cactccttcc tcggtgattt tgcgcaactt
     2341 cacgagcgag aaaatctgat acccgccgct gtcggtgaga atcggcccat cccaactcat
     2401 gaaattgtgc aggccgccaa aatacttgat gacgtcgagt ccaggcctaa cgaacaagtg
     2461 gtaggtgttt cctagaataa tctgcgcatt cagctcgcgg agttcgcgcg gactcacgcc
     2521 cttcacgctg ccttgtgttc ccaccggcat aaacgcgggc gtatcgatca tgccatgcgc
     2581 agtttttaat cgtccgcgtc gggcctttga atgttgatcg cttgcgagga gttgaaagtc
     2641 attctgcatg tgacattaga ggttcctcga cttcgctagg aatgacaatt gaaggccaaa
     2701 atattttttg cagatcagga tcttgcctct atattcggcg cttaccgcat caggagcgtg
     2761 agagagttat tgcgcggcct gaagcgggtt ttttgtcgcc cggagtaacg atctttggcg
     2821 gcgctttacg tttaggattt ggaaaatgcc cacgatcaat cagctgattc gcaaaggacg
     2881 ccagaaggtg tcggtgaaat cgaagtcacc ggcgctggcg ggttgtccgc agcggcgcgg
     2941 tgtgtgcgtg caggtgatga cgcgtacgcc gaagaagccg aactctgcgc tacgcaaagt
     3001 ggcgaaagta cggttgacga atggccagga agtgattgcc tacattccgg gcgagggaca
     3061 caatttgcag gagcactcca tcgtgctcgt gcgcggcgga cgagtgaagg atttgcccgg
     3121 cgtgcgttat cacattgtgc gcggaacgct tgacgcgctt ggtgtggatg ggcggcggcg
     3181 cggtcgctcc aagtacggag cgaagcggcc gaagggcggg gcggccggtg gaggcggcgc
     3241 ggcgaaagca gcgccggcag cggccaagta aaacaatcaa atttgaaacg gaccatcgat
     3301 aatgtcgcgg cggaggagag ttcacaaaaa agaggagcac gtcgattccc gatatgggag
     3361 tcaggcggta gcccgtctca tcacgacagt aatggagcgg ggcaagaaat cgctcgccga
     3421 acgcgtcgtg tacaccgcga tcgataagtc gcgcgaaggc tctgattcgg tcgatccgct
     3481 ggagatcgta aacaaagcaa tcgaaaacgt gcgtccgcgg ctggaggtgc gttcccgccg
     3541 ggttggcggc gcaacttatc aggtgccgat ggaagtgacg cccgcgcggc aaatctcact
     3601 agccactcgc tggatcgtga aatttgccga cggccgcaag ggcctgaagc tggccgacgc
     3661 gctggcgcaa gaactcaaag acgccgctgc gggccagggg aacgcgatca aaaaacgcga
     3721 cgacacacat aaaatggcgc aggcgaaccg cgcgtttgcg catttcaggt ggtgacaatt
     3781 atggcgacgg cgacaatgga acaaaagaag actgcggcga agaatccaaa ctcgccggat
     3841 cgcaagtttc cgctggaacg aacgcggaac atcgggatcg cagcgcatat cgacgccggc
     3901 aaaacaacga ttaccgagcg cgttctcttt tacaccggca tgatccacaa aatgggggag
     3961 gtgcacgagg gcacaaccgt gaccgattgg atggagcagg aacgggaacg tgggatcacc
     4021 atcacgtcgg ccgcgacaac gtgcacttgg tcacagcgca aagaagaagg cgtttacaag
     4081 atgttcgaag gggtcaagga gcgcgtcaat atcattgaca cgccgggtca cgtcgatttt
     4141 accgctgaag tggagcgttc actccgcgtg ctcgatggcg cgatcgcagt tttcgacggt
     4201 gtagccggcg tgcagccgca atccgaaacg gtctggcgtc aggcgaccaa gtacgacgtg
     4261 ccgcgtctgg cgttcatcaa taagatggat cgcgtcggcg cagacttcga aatgtcggtc
     4321 gacagcatcc ataaaaaact cggcgcaaat gcctggccgg ttttactgcc gctgggaagg
     4381 gaagatcagc tgcggggtca actggacgtc atcaacaaga aggcgattat ttattctgac
     4441 aacgatcagc ttggatcgac ctatgaagtg accgatgtgc caaaggagca cttgggcgca
     4501 gttgagaagg cgcgcaacga actaatccaa caggtttcaa atctcgacga cgaagtcgcg
     4561 gaggcagtgc tcgaagagcg cgaagtcacg ccggaattgt tgaaggcggg cattcgtcgc
     4621 cagacgatcg cgaataaatt cgtgccggtc attggcggct cagctctcaa gaatatcggt
     4681 atccaatatt tggtcgacgc ggttatcgat tatctgccga gcccgctcga cattccgccc
     4741 gccaaaggcc agaaccccga cacgggcgag ccaatggaag cgatgaccga tgacaacggc
     4801 gagttctgtt ccatcgcgtt caagctgtgg agcgatccat ttgtcgggaa actggtgttc
     4861 ttccgcgttt attccggcac cctcagcaaa ggcgacactg tttacaatcc gcgcacgaac
     4921 aaacgtgagc ggatttcgcg tttaattcag atccaggcgg acaaacgcga agacatcgag
     4981 acgtgttact cgggcgatat cgccgcgatt gtcggaatta aaaatatcac gactggtgac
     5041 acgctctgcg acgaggacca tccgatcctt ctcgaaccgc catcattccc cgatccagtt
     5101 atttcaatgg cgattgagcc aaagacgaaa ttggaccagg aaaaaatggc taccgcgttg
     5161 caacggcttg ccgaagaaga cccgacgttt cgcgtttata cacacgaaga taccggccag
     5221 accatcatcg ccggcatggg cgagttgcac ttggaaatca ttcgtgaccg gatgttccga
     5281 gaattcaaag tggacgcgaa cgccggcaaa ccgcagatcg cgtaccgcga aaccatcacc
     5341 gccagcgccc atggcgttgg caaattgatt aagcaatcag ggggtcgcgg tcagtatggg
     5401 cacgtggaag tggacgtgcg tcccggcgcg cgcggcaacg gtctcacagt cgagaacaag
     5461 atcgtgggag gcgttattcc gagggaatac atcccggcgg tgaagaaggg catcgacgaa
     5521 gcggtgctca acggcgtact gggcggttat cccgttgtcg atgtggaagt ggacatcgtt
     5581 tacggctcgt tccacgaagt cgattccaac gagctcgcat ttaagatggc gtcgattttc
     5641 gcgatgaaag acggcttcag gcagggcaaa ccaatcctgt tggagccgat catgaaggtc
     5701 gagaacatca cgccggaaga atatcagggt gatatttgcg gcgacttgag ccggcggcgt
     5761 ggtgccatca acagcatcga gacgcgcggc aacatggtga tcattcacgc gttggtgccg
     5821 ctggcggaat tatttgggta cgcaacggcc atccggtcgt tgtcgaaagg ccgctcgagt
     5881 tattcgatgg agccgtcgtc ctttgagccc gtcccggcga acctggtcgc ggcgattctt
     5941 gatcaaaagg aggcgaaatg agtaatggcc agcgcatccg cattcgcctg aaggcgttcg
     6001 atcaccgcat gctggaccaa tccgcgattg agatcgtgga tactgccaaa cgaacgggcg
     6061 cgcgtgtggc tgggccgatt ccgctgccga cattgatcga aaagttcacg gtgaatcgtt
     6121 caccgcacgt ggacaaaaaa tcgatggagc aatttgaaat tcgcactcac aaacggttgc
     6181 tggacatcat cgagccaacc gcaaagacag tggacgaatt gaagaaactg aatctgcccg
     6241 cgggcgttga cattacgatt aaaatctaac cggaggcgcc tctgaaacat ttgcgattgc
     6301 atagtcatga gcatcggact tctaggacaa aaaattggta tgaccagcgt ttacgacgag
     6361 aagggccgac tgtgtccggt gactgtgatc gtggccggcg ataatgtttt gttgcgccgt
     6421 ctgaccgaag acaacgaagg ttattcggcg gtgcagatcg ggttcggcgt ccaaaaggaa
     6481 tcgcgcgtgt cgaaggcatt ggtcggtgaa ttcaagaagg ccggcgtcga gccgcagcga
     6541 ttggtgcgcg aatttcgtct gcaaaacgac cttcccgaag gggacgtcaa cttgagtgtt
     6601 acgcaatttc agccgggcga cttcgtcgat gttatcggcc gctcgaaagg caaaggtttt
     6661 cagggcgtga tgaagaagca caacttcgcg gggcagggcg ccgcgcacgg ttcgaagacg
     6721 caccggcgca tcggcgcggt tggcaatcgt tctacgccgg gacgcatttg gaagaaccag
     6781 gggatgcccg gtcacatggg cgatcggcgc gtaacggtgc aaaatctaca ggtcatgcag
     6841 gtgcgcgaag cggaaaaaat tattttgata agcggtgctg tgccgggagc gaacggcagt
     6901 tatgtgatcg tgcgaccggc catcaaacat cccgaacact tactggcctt acatgctgag
     6961 caccgaaagc atgaggaaga agagaaggcg aaaaagccga aaaccctacg tgaaatggcg
     7021 cagaagaaat gagcgcgaaa gttttaagta aggccgcagc gaaagaagca aagatcgacc
     7081 tgatcgagga tggtcgcggt acgcaagctg tgcacgatgc ggtagtggcg atgcgcgcgg
     7141 cgcggcgttc tggttccgcc aacacgaaga gcaaggccga agtagatttg tccggggcaa
     7201 agccatggcg gcaaaaaggg accggtcgtg cccgagccgg ttacaaatca tcgccgattt
     7261 ggcgaggtgg cggcgtcgtt tttggcccga agtcgcgcga ttattcgaag aaagttggaa
     7321 aatccgttcg tcgactcgct tttcgaaaag cgctgagcga acgcatcaac gccggggatg
     7381 ttttgaccat cgacaagttt gttgtgtcgg agctgaagac caaggcgttc atcgattttc
     7441 tcaaaaaaca gactgatgcc aagagggtgc ttatcgtttc cgattcgttt gacgagaaaa
     7501 cctacaaatc cgcccgcaac gtaaagcctg tgaaactttc cactgcggcg gatgtcaaca
     7561 cggagcagtt gctcgcgttc cagaaaattc tcgttaccca gaaggccttg gaaaaactgg
     7621 cggagagaac gcgatgaacg agcacgatat tattaagact gcctcgctga ctgagaagtc
     7681 aacgctgatg agcgagaagc agaataagta cgtctttcgc gtcagcccaa aggcgaacaa
     7741 gattcagatc aagaacgcaa tcgaacggct gtttcagaaa acggtcgtga atgtgaacac
     7801 gtgtaattac gctggcaaag agaaacgctt gcgcgggcct cttggacgtc gcccgcggtg
     7861 gaagaaagcg atagtgacgt taaaggaggg cgataagatc gaactggtct gatcgcgagg
     7921 gttatggcac tcaaagaatt tcgcccacta acgccgacgc agcgtttcaa gtcgctgcct
     7981 gcattcgatg aaattacgaa gtggcgccct gaaaagagtc ttcttcagcc gaagaaaagg
     8041 agcggcggtc gcaacaaccg cggtcggctg acatcgcgac atatcggtgg cggtcacaag
     8101 cacaagtatc gcaaagtcga ttttaaacgg cgcaagtacg gtgtcgcggc ggaagtgata
     8161 gggattgagt acgacccgaa tcgctcggcg cgcattgctc tcatcaaata tgccgatggc
     8221 gaactgagct acattctcgc gccgaatgga cttcaagtcg gagcgactgt gaatgccgga
     8281 aatgatgtcg cgcctgattt ggggaattcg ctgccgctac gtgcgattcc tctaggcaca
     8341 agtgttcaca acattgaatt gactccggga cgcggcggcc aggtcgcgcg cagcgcgggg
     8401 caacaggcga cgcttactgc actggaagct ggatatgcgc tggtgaaaat gccttcgggc
     8461 gaaattcgtc gaattcacgg gaactgcttc gcgaccattg gccaggttgg caatgtcgat
     8521 catatgaacg tttcgagcg
//
LOCUS       DATDAJ010000134         2095 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_838975, whole genome shotgun sequence.
ACCESSION   DATDAJ010000134 DATDAJ010000000
VERSION     DATDAJ010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838975"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..321
                     /locus_tag="VIS53_03115"
     CDS             <1..321
                     /locus_tag="VIS53_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766808.1"
                     /translation="IMAALIKANRYIYNNKAKVVEIATKYTQQDGDAVAQTYDILANA
                     GAWPVNEGLPKDMVEWTVNKQVELGTIKAADKPSYEKLVDVSIVQAALAKAGGRLQGD
                     KRWD"
     gene            385..720
                     /locus_tag="VIS53_03120"
     CDS             385..720
                     /locus_tag="VIS53_03120"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEY5766809.1"
                     /translation="MAQRDREKERDGSAGDTASPFGEPVTIPLADALDLHPFQPKDIP
                     SVVEEYLKQCQQAGYREVRLIHGKGKGVQRNIVRSLLQKHPGVDSFHDAPLEVGSWGA
                     TIVALKQES"
     gene            complement(717..1217)
                     /gene="lspA"
                     /locus_tag="VIS53_03125"
     CDS             complement(717..1217)
                     /gene="lspA"
                     /locus_tag="VIS53_03125"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEY5766810.1"
                     /translation="MSAKKWQLVGTWLILIVVLDQLTKIIVDRAIPLHHSIPILDGLF
                     SLTYVRNTGAAFGIFAGSHEAFRLPFLVLVSLLAIGFIIVMLRRLREQETGLITALAF
                     ILGGAIGNLIDRVLHGEVIDFLDFYWSNYHWPAFNLADSFITVGVVITIFYLMKAKGE
                     DPFAPA"
     gene            complement(1214..>2095)
                     /locus_tag="VIS53_03130"
     CDS             complement(1214..>2095)
                     /locus_tag="VIS53_03130"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY5766811.1"
                     /translation="EAYRRLRNTARFLISNLYDFEPDKDAIQTAQLDEMDRWILQRTQ
                     NVLSRCREAYDNYEFHAVYHTLNNFCSVDLSAQYLDIVKDRLYCEGTKSQTRRAAQTT
                     LYRILDTLVHLMAPILSFTAEEIWNYMPDKERRAGSVFLSRIPEPDASLGDPQLADKW
                     DRIFKERSEVLKALEQARAAGIIGHSLDAKVSFESRNGDRSSILRDLVLADRDRLQDL
                     LIVSQADILGDSLGAAGVEASVYEASQLNCRILVRKADGAKCARCWKYDRAVGKDQTH
                     PTVCARCASVLNAGEAA"
BASE COUNT          523 a          555 c          577 g          440 t
ORIGIN      
        1 attatggccg cgttgattaa agcaaaccgt tacatttaca acaacaaagc gaaggtggtt
       61 gagatcgcca ccaagtacac gcagcaggat ggcgacgccg tggcgcaaac gtacgacatc
      121 ttagcgaacg ccggggcctg gccggtaaac gaaggtctac ccaaagatat ggtcgagtgg
      181 acggtcaaca agcaagtaga gttaggcacg atcaaagcag ctgataagcc aagctacgaa
      241 aaactcgttg acgtttcgat cgtccaggct gcgctggcaa aagccggcgg ccgtttgcaa
      301 ggcgacaaac gttgggatta gctgaaacgc tagattccga ttaacactga cggagggcaa
      361 gaacagtttc ttgccctctt ttttatggcg cagcgcgacc gggaaaaaga aagagatggc
      421 tctgctggcg atacggcttc tcccttcggc gaacccgtga ccattccgct ggccgacgct
      481 cttgatctcc atccctttca gcccaaagac attccgagcg tcgtcgaaga atatctcaag
      541 caatgccaac aggctggtta tcgtgaagtg cgcttgatcc acggcaaagg caaaggagtt
      601 cagcgcaata tcgtgcgttc gctgttgcaa aaacatcccg gcgtcgattc atttcatgac
      661 gcgccgcttg aggtcggcag ctggggcgcg acgatagttg ccttgaaaca ggaaagctag
      721 gcgggagcga aaggatcttc gcctttcgct ttcattaaat aaaaaatcgt aatcacgaca
      781 ccgacggtga tgaagctgtc ggcgagattg aatgccggcc agtgatagtt cgaccagtag
      841 aaatccaaaa aatcgattac ttcgccatgc agaactcgat cgatcagatt tccgatggcc
      901 ccgccgagaa taaacgcgag cgcggttatc agcccggttt cttgctcgcg caggcgccgc
      961 agcatgacga tgatgaaacc gatggcaaga agggaaacca gcaccaggaa gggcaagcga
     1021 aaagcttcat ggctgccggc gaagatgccg aacgcggcgc cggtattgcg cacgtaagtc
     1081 aggctgaaca agccatcgag gatcgggatc gagtggtgca gcggtatcgc gcggtcgacg
     1141 atgatcttgg tcagctgatc cagaacaaca atcaaaatca accacgtgcc gacgagctgc
     1201 catttttttg cactcaagcc gcttctccgg cattgagcac cgacgcgcaa cgggcgcaaa
     1261 cggtcggatg ggtttgatct ttgcccactg cccggtcgta tttccagcag cgcgcgcatt
     1321 tcgcgccgtc cgctttgcgc accaggatcc ggcaattgag ttgactcgct tcgtacaccg
     1381 atgcctcgac tccggcggcg cccagagaat caccaaggat atccgcttgt gaaacaatca
     1441 aaagatcctg taatcgatcg cgatcagcta gaaccaggtc tcttaaaatc gagctgcgat
     1501 cgccgttgcg cgattcgaac gagactttgg catcgagcga atggccgatg attcccgcgg
     1561 cgcgggcttg ttctaaagcc ttgagcacct cgctccgttc tttgaagata cgatcccatt
     1621 tgtccgccag ctgcggatca ccgagactgg catcgggctc gggaatgcgc gagagaaaaa
     1681 cacttccggc gcgccgctct ttgtccggca tgtagttcca aatctcttcc gccgtaaaag
     1741 acaaaatggg cgccatcaga tggaccaagg tgtcgagaat ccgatagagc gtcgtctgcg
     1801 cggcgcggcg ggtttgcgat tttgtgcctt cgcaatacaa ccggtctttg acgatgtcga
     1861 gatattgcgc acttaaatcg acgctgcaaa aattattgag cgtatgatac accgcgtgga
     1921 attcgtaatt gtcgtaagct tcgcggcagc gactgagcac attttgtgtc cgctgcagaa
     1981 tccagcgatc catttcgtcg agttgagcag tttgaatggc gtctttatcc ggctcgaaat
     2041 cgtagagatt actgatcaaa aaacgcgccg tgttacgcaa gcgccgatag gcttc
//
LOCUS       DATDAJ010000135         3553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_840644, whole genome shotgun sequence.
ACCESSION   DATDAJ010000135 DATDAJ010000000
VERSION     DATDAJ010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840644"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..313
                     /gene="rplU"
                     /locus_tag="VIS53_03135"
     CDS             <1..313
                     /gene="rplU"
                     /locus_tag="VIS53_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY5766812.1"
                     /translation="FRVAEGDTIDVDLLDVEPGKTATFGDVLLFADGKDVSHGNPVIS
                     GAKVTAEVVEQRKDKKVVAFKYKRRKGYHRTVGHRRKLTRVKIKTIDVGSKKTATKKS
                     E"
     gene            349..612
                     /gene="rpmA"
                     /locus_tag="VIS53_03140"
     CDS             349..612
                     /gene="rpmA"
                     /locus_tag="VIS53_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEY5766813.1"
                     /translation="MAHKKGQGSVKNGRDSVSKRLGVKKFGSEVVVAGNIIVRQRGTK
                     FLPGRNVGLGRDYTIFALIDGNVRFDRGGRRVNVDPGVTASSS"
     gene            784..1389
                     /locus_tag="VIS53_03145"
     CDS             784..1389
                     /locus_tag="VIS53_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HEY5766814.1"
                     /translation="MMRYNTFILFGAPGSGKGTQGKTLGTIPRYYHCACGDVFRSIDT
                     RTKVGKAFLEYSSKGQLVPDDITVELWREAIDSAVEAHKFKPDIDTLVLDGIPRNVGQ
                     ARIMSEMIDVKKVFHLACPDRETLFYRLKKRALKENRLDDANEEVIQRRLDIYEKESR
                     PVLSFYSKELVTVVDAIQSPVKVLLDILKSVNDGAYEPTAV"
     gene            1682..2626
                     /gene="fmt"
                     /locus_tag="VIS53_03150"
     CDS             1682..2626
                     /gene="fmt"
                     /locus_tag="VIS53_03150"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY5766815.1"
                     /translation="MASRSMRIVFIGTGEIGVPTLRALLHSEHEVVAVVTQPDKPVGR
                     EQSIQPPPIKKALIGRAPPPSTPIFQPVRIKDPQIIKKIRGAKPDVIVVVAYGQILPR
                     DVLEIPRLACLNLHASLLPRWRGAAPIQAAIAACDCETGITVMYMDEGLDTGDILLQR
                     NVEIQPNDTGGALHDRLAQIAPEALRESLRLLATGNAPRIPQDNARATYAPKLKREHG
                     QIDWSESAEAIERNIRAYNPWPGAFMKLDRQNLKIFSASVVGLNGQPGEILRSDKGLI
                     VATGRGALSLAEVQLEGKRRMSVAEFLRGHRALIQRPD"
     gene            2797..3537
                     /gene="pyrH"
                     /locus_tag="VIS53_03155"
     CDS             2797..3537
                     /gene="pyrH"
                     /locus_tag="VIS53_03155"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006984010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEY5766816.1"
                     /translation="MEPETPVYERIVLKLSGEAMHEHGGRDNISPTVVRAIAERMKEV
                     RDLGVEVAVVIGGGNIWRGLSAADRGMDRTTADYMGMLATVINALALRSILEQIGVEA
                     RVQTAIEMKNVAEPFILGRAVRHLELGRVVIFAAGTGNPYFSTDTTAALRASEIRADV
                     ILKATKVDGVYDRDPNKFPDARRYDRLTFTEALTKRLQIMDSTAFSLCMDNKIPIVVF
                     NMYKPGILRDAVLGRTVGTLVCDDAPAK"
BASE COUNT          844 a          969 c          995 g          745 t
ORIGIN      
        1 atttcgcgtc gcggaaggtg acactatcga tgtcgatctt ctcgacgtcg aaccgggcaa
       61 aactgccacg tttggtgatg tactactgtt tgccgacgga aaagacgtga gtcacggaaa
      121 cccagtgatt tccggagcca aggtgaccgc tgaagttgtc gagcaacgca aggacaagaa
      181 agtcgtcgcg ttcaaataca agcggcgcaa aggttatcac cggactgtcg gccaccggcg
      241 caaattgacg cgtgtaaaga tcaagacaat cgatgttgga tccaagaaaa ccgccacgaa
      301 aaaatcagag tagatcgaac atcaaccctc aaacatcaaa cttccgtcat ggctcataaa
      361 aaaggacaag gcagcgttaa aaacgggcgc gacagcgtca gcaaacggct gggtgtgaaa
      421 aaattcggca gcgaggtagt tgtagcaggc aacatcattg tgcgccagcg cggcacaaaa
      481 tttttgccgg gaagaaacgt cgggctcggt cgcgattaca caatttttgc tctgattgac
      541 gggaacgtgc gcttcgatcg cggcgggaga cgggtgaatg tagatcccgg cgtgaccgct
      601 tcgtcatctt gagctccgaa agtttttcgg gtcgaaagat cccgttgaaa tatcgagcgg
      661 taactccacg ggatggaaag cctggcctcg ccttcttcgg cggcggcgtt gcagcctcga
      721 cttcgctcgg aatgacggtg cttgctctgc cggttccctt cgcggtataa gcgaggtttc
      781 gccatgatga gatataacac tttcatcctt tttggcgcgc ctggcagcgg caaaggcacg
      841 cagggcaaga ccctcggcac gatcccgcgt tactatcatt gcgcttgtgg cgacgtattc
      901 cgttccatcg acacgcgcac aaaagtaggc aaagccttcc ttgaatattc gagcaaaggc
      961 cagctcgttc cggacgatat cacggtggag ctgtggcggg aggcgatcga ttcggccgta
     1021 gaagcgcaca agttcaagcc ggacatcgac acgctcgtac tggacgggat cccccgaaac
     1081 gtaggtcagg ccaggatcat gagcgaaatg atcgatgtga agaaggtgtt ccatcttgca
     1141 tgccccgatc gtgaaacact gttttaccgg ctcaagaagc gcgctctgaa agagaatcgt
     1201 ctcgacgacg caaacgagga agtcatccaa cgtcgtcttg atatttatga gaaagaatca
     1261 aggccagtgc tgtcattcta ttcaaaagag ctggtcaccg tggttgacgc cattcagtcg
     1321 cccgtgaaag ttctgctcga tatcttgaag agcgtgaacg acggcgcata tgaaccaaca
     1381 gcagtttgag aatttcactg cctcgagtct ttattgcgaa aagtgcaaag ccgcgatgcc
     1441 ggtccgcgag cgccttttgt tagtactgtc tgaccgcgag atcttcgatt atctctgcac
     1501 cgagtgcggt tcgtcagtag gccggcgtga agtaacggct ggcgagaaga tgatggcaca
     1561 agcgatggca caagcgatgg ctggccgaac acgtcgggcg ccggtgtctg ttcggcttcg
     1621 ctagattccc aacgcgccac agggatggac ggctcggcag tccgtcccta ccattgatga
     1681 gatggcttct cgaagcatgc ggattgtctt tatcggcacg ggcgaaatcg gcgtgccgac
     1741 gctacgagca ttactacatt ccgagcacga agtcgtcgcg gtcgtcaccc aaccggataa
     1801 gccggtagga cgcgagcaga gcattcaacc gccgccgata aaaaaggcat tgattggtag
     1861 ggcgccaccg ccgagcacgc cgatcttcca acccgtaaga atcaaagatc cgcagatcat
     1921 taaaaagatc cgcggggcga agcccgacgt gattgtcgtc gttgcctacg gccaaatcct
     1981 ccctcgtgat gtgctcgaga ttccacgcct cgcctgtctg aatctacacg cctcgcttct
     2041 tccccgctgg cggggcgcag cacccattca agccgcaatc gcggcatgtg attgcgagac
     2101 cggcatcact gtcatgtaca tggacgaagg actcgacact ggcgatatcc tgttacagcg
     2161 caatgtcgaa atccagccta acgacaccgg tggagcactg catgatcgcc tggcgcagat
     2221 tgctcccgag gctttgcgtg agtctttgcg actccttgcg accggcaatg cgccgcgaat
     2281 tccccaggat aatgcacgcg cgacttatgc cccaaaactg aaacgtgaac acggccagat
     2341 cgattggtcc gaatcagccg aagcgattga gagaaacatt cgcgcctaca atccgtggcc
     2401 cggcgcgttc atgaaacttg atcgtcaaaa tctcaagatc ttttcggcat cagttgtcgg
     2461 cctcaatggc caacccggag aaattttgcg tagcgacaaa ggcctgatcg ttgccactgg
     2521 cagaggcgca ctttccctcg ccgaagtgca acttgaagga aaacggcgaa tgagcgttgc
     2581 tgaattcctg cgtgggcacc gcgcactcat tcagagaccg gattgatttc gaccccaaaa
     2641 ggtttcgctt ggtagggcgc gtcactccgt gtgcgccgcg aatcgtaatg tacggcgtgc
     2701 agaggactgc ccgccctacc gactgggatg ttgtcgatcc tacgcatttt gcttttcaaa
     2761 cgtggctatc ttctgtttgg atattcgtcc gctgccatgg aaccagaaac gccagtctat
     2821 gaacgcatcg tgctcaagct gagcggcgaa gcaatgcatg agcacggtgg gcgcgacaat
     2881 atttcgccta ccgtcgtgcg cgcgatcgcc gagcgcatga aagaagtgcg cgatctcggc
     2941 gtggaagtgg ccgtggtgat cggcggcggc aacatctggc gcggtctttc tgcggcggat
     3001 cgcggaatgg atcgcaccac cgcggattac atgggaatgc ttgccacagt cattaacgcc
     3061 ctcgcgttac gaagcatact cgagcaaatc ggcgtcgagg cccgtgttca aaccgcgatt
     3121 gaaatgaaaa atgtggcgga gccattcatc ctcggccgtg ccgttcgcca tcttgagctg
     3181 ggcagagttg ttatttttgc ggcgggcacc ggtaaccctt atttttccac agacacgaca
     3241 gcagcactgc gcgcgagcga gattcgcgcc gacgtgatcc tgaaagccac aaaggttgat
     3301 ggcgtttatg atcgcgaccc aaacaaattt ccggatgcgc gccgttacga tcgcctcacg
     3361 ttcaccgaag cgctcacaaa gcgtctccag atcatggatt cgaccgcgtt cagtctctgc
     3421 atggacaaca aaatcccgat cgttgtgttc aacatgtaca agcccggaat cctgcgcgac
     3481 gccgtgctgg ggcgaaccgt gggaactctg gtttgcgatg atgctccagc aaagtaaaca
     3541 ttcaccgata tga
//
LOCUS       DATDAJ010000136         2936 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_848639, whole genome shotgun sequence.
ACCESSION   DATDAJ010000136 DATDAJ010000000
VERSION     DATDAJ010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_848639"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..2882
                     /locus_tag="VIS53_03160"
     CDS             216..2882
                     /locus_tag="VIS53_03160"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEY5766817.1"
                     /translation="MAELPTRYDPKAVEPKWYQRWLENRDFVANPESSKPAFSIVMPP
                     PNITGMLTLGHVLNNTIQDILARRARMQGFEVLWLPGMDHAGIGTQTAVEKYLRRTEN
                     KTRHDLGREEFLRRVLEWQDKHGGIIIEQLKRLGCSCDWSRQRYTLDDAYAAAVQKIF
                     VDLYNKGLIYRGRRMINWDPAAQTAVSDEEVISKPQKGYLYFVRYEIVEEPGRFLEVA
                     TTRPETIMADTAMAFHPGDRRYVDLLGKHAWRPLAREKIPVIADEAIDPEFGTGVLKV
                     TPAHDTLDFEIGQRHDLPIIDVLTPAGRVDCPAVLELHGLERFEARKKAAELLQARGL
                     LAKAEPYENNIGFSDRSDVPIEPRISEQWFLRYPKTKEALAVVRDHLIRFFPAHWEKV
                     YAQWLENIRDWCISRQVWWGHRIPAWYRKSQAPSSKSQRSEKIYVGTEPPPDPENWIQ
                     DEDTVDTWFSSWLWAYETMDPQTRKKFYPTSVLVTAADIIFFWVARMIIAGLEFKPAK
                     SSKIEDNIPFHHVFFTSIVRDSQGRKMSKSLGNSPDPLELIDKYGADGLRFGLMRIAP
                     TGQDIRFDERQIEEGRNFATKLWNVARFRQMQGSASVPLASKPEAYATLSIFAVEVLA
                     RLNETIDAIESAYREYHFNQVAQHLYNFVWSDYCDWFVEAAKTDIFSEDEAKKRSALA
                     VMDLVLSATLRLLHPFMPHLTEEIWSLLGLGKGWIQFAAPPDKLALDAVADVADRRRL
                     VSSIYATVQAGRNLRSASKLPSNRKIRFILRTNDKTISEQIPTLSRLLNAQELTLDPK
                     YTAPAGTPVAVTPLGELFLAIAAADQASERERLDKEIARIAEEARTVEAKLQNNAFVE
                     RAPAAVVEEHRRRVADLTAQLTKLKQARDGSG"
BASE COUNT          689 a          776 c          844 g          627 t
ORIGIN      
        1 aggtaaacga ttgtttcgtt cggcagccga tcgcggagcg ccttgaccac ggttagcccg
       61 ccaatcccgg aatcaaaaac accgatcggt cgcggattgc tcatgcagcg ggaaggtggc
      121 ggttagggca tcgcgatgca agcacacggt aggactcggc cgccgggcgc gccgctgatt
      181 tgcaaacgcg ctccactttc ggatgattga tcgcgatggc tgaacttccc acgaggtacg
      241 atccgaaagc cgttgaaccg aagtggtatc aacgttggct ggagaatcgc gatttcgtgg
      301 caaatccgga gtcctcgaag ccggcgtttt cgatcgtgat gccgccaccg aacatcacgg
      361 gcatgcttac gctcggccat gttttgaaca acaccatcca ggacattctc gcacgccgcg
      421 cacggatgca gggattcgaa gttctttggt tgccgggaat ggatcatgcg ggaatcggaa
      481 ctcagaccgc tgtagagaaa tatctgcgca ggaccgaaaa caaaacacgc cacgatctcg
      541 gtcgcgaaga atttctgcgg cgagtgctgg aatggcagga caagcacggc ggcatcatca
      601 ttgaacagct taagcggctc ggctgctcgt gcgattggtc gcgtcagcgt tatacgcttg
      661 atgacgctta tgctgctgct gtccaaaaaa tctttgtcga tctttacaat aaaggcctga
      721 tctatcgcgg tcgccgcatg atcaattggg atcctgcggc gcaaactgcg gtttccgacg
      781 aggaggtgat tagcaaaccg cagaaaggat atttgtattt cgttcgctac gagattgtgg
      841 aggaaccggg ccgctttctc gaagtcgcaa cgacgaggcc ggaaacgatc atggccgata
      901 cagcgatggc gtttcatcct ggcgacaggc gatacgtcga cttgttaggc aaacatgcct
      961 ggcgtccgct tgcacgggag aaaattccag tcattgccga cgaagcaatc gatccggagt
     1021 ttgggacggg tgttctaaag gttaccccag cacacgacac tctggatttt gaaatcggcc
     1081 agcgtcatga cctgcctatc atcgacgttt taactcctgc tggccgtgtc gattgccctg
     1141 cggttctgga gttgcacgga ctggagcgtt tcgaggcgcg gaaaaaagcc gcagagctgt
     1201 tgcaggcgag gggacttctg gccaaagccg agccatatga gaacaacatt gggttcagcg
     1261 accgcagcga cgtgcccatc gagccgcgca tcagtgagca atggttcctg cgttacccga
     1321 aaacaaaaga agcgctcgca gtcgtccgtg atcatctcat ccgtttcttt ccagcgcact
     1381 gggaaaaggt ttacgcgcaa tggctggaga acattcgcga ctggtgcatc agccgtcagg
     1441 tgtggtgggg acaccgtata ccggcctggt accggaaatc tcaagccccg agttccaaat
     1501 cccaaaggag cgagaaaatc tacgtcggca ccgagccccc gcccgatccc gagaactgga
     1561 tccaggatga ggacacggtc gacacttggt tttcatcgtg gctgtgggcc tacgaaacga
     1621 tggacccgca gacgcgaaag aaattctatc cgaccagtgt gctcgtaacc gcggcggaca
     1681 tcattttctt ctgggttgcg cgcatgatca tcgccgggct cgagttcaag ccggcgaaat
     1741 ccagcaagat tgaagacaac attccgtttc accacgtttt cttcaccagc attgtccgcg
     1801 acagccaggg tcgcaaaatg tcaaagtcgc tcggcaattc gcctgatccg ctcgagttga
     1861 tcgacaagta cggcgccgac ggtttgcgat ttggtctgat gcgtatcgcg cctacgggac
     1921 aggacattcg gttcgacgaa cgacaaatcg aggaaggccg aaactttgcg acgaaactct
     1981 ggaacgttgc acgatttcgc cagatgcagg gtagcgcgag cgtcccgctt gcgagcaagc
     2041 cggaggctta cgctactctg tcgatttttg ccgtcgaagt gctcgctcgt ttgaatgaga
     2101 caatcgatgc aatcgaatcg gcatatcgcg agtatcactt caaccaggtc gcccaacacc
     2161 tctataattt tgtctggagc gattactgcg actggtttgt tgaagcggct aagactgaca
     2221 tctttagcga ggatgaagcg aaaaagagat cggccctggc agtgatggat cttgtgctct
     2281 cggcgacatt gcggctgctg catcccttca tgccacattt aactgaggag atttggtcgt
     2341 tattgggttt gggaaaaggg tggattcagt tcgcggcccc gcccgacaag cttgcgttgg
     2401 acgcggtagc cgacgttgcc gataggcgga gactcgtatc aagcatctac gcaaccgttc
     2461 aagccggtcg taacctaaga tcggcatcga agttaccgtc taacagaaag atacgattta
     2521 ttttacggac gaacgataaa acgatttctg agcaaattcc gaccctcagc cgattgttaa
     2581 atgcccagga gctaacgctc gaccctaaat acacggcgcc ggctggcact ccagtagcag
     2641 tcactccatt aggcgaactt tttctcgcga tcgccgctgc ggaccaggcg agcgaacggg
     2701 agcggttgga caaggaaatc gcgagaattg ctgaggaagc gcgaaccgtt gaggcaaaat
     2761 tgcaaaacaa cgcgttcgtg gagcgagctc cagcggcagt agtcgaggag caccggcggc
     2821 gcgtcgccga tcttaccgcg cagttgacga agttgaaaca ggcgcgggat ggctcgggtt
     2881 aaggataacc ttctgctcgt cgatcttggc gccgcgcttt tgaaagaatt ccttta
//
LOCUS       DATDAJ010000137         4567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_850408, whole genome shotgun sequence.
ACCESSION   DATDAJ010000137 DATDAJ010000000
VERSION     DATDAJ010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4567
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_850408"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VIS53_03165"
     CDS             <1..439
                     /locus_tag="VIS53_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY5766818.1"
                     /translation="VELAYDFVTDCPFILAYGDILIASANYKRLVNLPDDVEAMLTVT
                     RGEDVSKGGAVFLDDEMHLVDLREKPKPGEPTSPWYNAGVYAFRPSIFDFTAKLKPSP
                     RGEYELTDAIRDLAQSGKKVKALELTGEWADVRDPEILERLNR"
     gene            complement(472..1293)
                     /gene="pssA"
                     /locus_tag="VIS53_03170"
     CDS             complement(472..1293)
                     /gene="pssA"
                     /locus_tag="VIS53_03170"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEY5766819.1"
                     /translation="MNEQPSKIYLLPNLMTAGNLFCGFTATLKILEGALLQSANADLA
                     ADRFHEAIWFILGAFVFDFLDGRLARLGGHESVFGREFDSLADIVSFGLAPALMVYRV
                     VLNEFPNACWIIAFVYLACGALRLARFNSAAGHNGPDRQNTFTGFPIPAAAGLIASIT
                     LFLLWLAEGEHHIGNWRFVLPPLLLFLSFMMFSRFQYPSFKAVNWKTKKSIPRFLAII
                     LVLILTLLNYEWMPAVLFLAYLLYGVIRPWLSREWQREIEEEIGEESSEPAEQTR"
     gene            complement(1290..1925)
                     /locus_tag="VIS53_03175"
     CDS             complement(1290..1925)
                     /locus_tag="VIS53_03175"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:NF003685.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEY5766820.1"
                     /translation="MRLQAFWEARWILGFLTVLAILFGLFSAWAFWFFVLLLLCTVAF
                     FRDPDRAAPMDPNMIVAAADGTVMDIVELDENEVLKNKTRRVGIFLSIFDVHTNRAPI
                     DGRVIYCQHRSGLCLDARRPDCSEKNESMVWAFQNPRVTIVVRQITGAIARRIVAWAK
                     VGDELKKGERFGMIRFGSRTELYLPVSATILVQVGDHVAGGATPIARLPNE"
     gene            2139..>4567
                     /locus_tag="VIS53_03180"
     CDS             2139..>4567
                     /locus_tag="VIS53_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HEY5766821.1"
                     /translation="MAQVQEEIPVENVGTGIASTQKYDAAQIDKLEGLEAVRKRPGMF
                     IGDPDERGLHHLVYEVLDNSIDEHLAGFCTKIEVVIHVDGSISVRDNGRGIPVDVHPK
                     WKMPAIELVLTNLHAGGKFGQGAYKYSGGLHGVGAKCTNALSEWFKAEVSREGKVYHM
                     AFAKGKTTDKLTVIGEVKNKKTTGTLITFLPDPTIFTITTEFKFERLAARLRELAFLN
                     PGLEITLTDERLDPPKKERFFYKHGIEEFVRQLGENKQVLHPKPIVIARQRDEVFVDV
                     VLQYNDSYNDQILPFANSISNPDGGTHLTGFRTALTRAINQYAKQNSLLKDKDPSLSG
                     DDVREGLIAVLSVKLPNPRFESQTKVKLVNTEIDGIVNSTVYDGLMTHFDKNPPIARR
                     VFEKVLTAARAREAARKARETIRKGALTGGGLPGKLADCSERDPEFTELYIVEGDSAG
                     GSAKQGRDRRYQAILPIRGKLINVEKAREDQFLKNAEIQAMVTAIGAGIGKPKEESNG
                     KDEGVFDMARLRYGRIIIMTDADVDGSHIRTLLLTFFFRQMTELVRAGKIYIAQPPLY
                     QIKRKKREEYVEDDARLNKILISLGAEDVRLKNLADKKEFTAAQLKDILESLEKLAKL
                     SEAVRRHGGDFETYLAQRSSKSAKLPNYLVKVRDGNEESAHYFHDEKAVRKFHQENLD
                     LNLFDTEIGQELLPLSEAPVRADGTRRRGRLVELHESAAIEKIIAELARKGLKVDHYA
                     TGDRPIFELIEGEGEKSISHPLFSIPEILQKILEIGRRGVQIKRFKGLGEMNAKELFE
                     TTMNPEKRKLL"
BASE COUNT         1213 a         1203 c         1212 g          939 t
ORIGIN      
        1 agtggagctc gcttacgatt tcgtcactga ttgtccattc attttggcgt atggcgacat
       61 tttaattgct tcggcgaatt acaaacgcct ggtcaatctt ccggacgatg tggaagcaat
      121 gctgacggtc acgcggggcg aagacgttag taagggcgga gctgtgtttc tcgatgacga
      181 aatgcatctg gtggatcttc gcgagaaacc caaaccaggc gagccaacta gcccctggta
      241 taacgccggc gtttacgcgt ttcggccaag cattttcgat ttcaccgcaa aattgaaacc
      301 ctccccacgc ggcgaatacg aattgaccga tgcgatccgc gacctcgctc agtccggtaa
      361 aaaagtgaag gcgctcgagc tcacgggcga atgggcagat gttcgcgacc cggaaattct
      421 agagcgatta aatcgatgag attgtcgact tccgcgatag tctgaatcac gtcaccgcgt
      481 ttgctcggcc ggttccgacg attcttcgcc gatttcttct tcgatttcgc gttgccattc
      541 ccgcgagagc catggccgta ttactccgta aagcaagtac gccaggaaca agaccgcggg
      601 catccactcg taattcaaca gggtcaaaat aagaacaagg atgatagcaa ggaaacgcgg
      661 aatcgatttc ttcgttttcc aattaaccgc cttgaagctc ggatattgaa accggctaaa
      721 catcatgaac gaaagaaaga gcaataaagg cggtagaacg aagcgccagt taccgatgtg
      781 gtgttcacct tcggcaagcc aaaggagaaa cagcgtgatt gacgcaatca aaccggcagc
      841 tgcaggtatg gggaaacctg taaaggtgtt ctgacgatcg ggtccgttat gccccgccgc
      901 tgaattaaaa cgggccagtc gcagcgcgcc gcaagccagg taaacgaacg cgatgatcca
      961 gcaggcattt ggaaattcat taagaacgac cctgtaaacc atgagcgccg gagcgaggcc
     1021 aaatgaaaca atatcggcga gtgagtcgaa ctcgcggccg aacacactct cgtggccgcc
     1081 gagccgcgca agtcttccat ccaaaaaatc aaagacaaac gcgccgagaa tgaaccagat
     1141 cgcttcgtga aagcgatctg cggcaagatc ggcatttgca ctttgcaaaa gagcgccttc
     1201 caaaattttc agcgtagccg tgaatccaca aaacagattg cctgccgtca ttagattcgg
     1261 cagcagataa atcttcgatg gttgctcgtt cattcgttag gcagtcgcgc aatcggagtc
     1321 gctccgcccg ccacgtggtc gcctacctgg acgagaatag tggcggaaac cggtaaatat
     1381 aattccgttc gcgagccgaa gcgaatcatc ccgaagcgtt cgcctttttt caattcgtcg
     1441 ccaaccttcg cccacgccac gatgcgtctt gcgattgcgc ccgtgatttg ccgcacaaca
     1501 attgtgacgc gcggattctg aaatgcccag accatcgatt catttttctc cgaacaatcc
     1561 ggccggcgcg cgtccaggca aagccccgac cgatgctgac agtaaataac gcggccatcg
     1621 atgggcgcac gattggtatg cacgtcgaag attgacaaaa aaattccgac acggcgcgtt
     1681 ttgtttttca gcacttcatt ttcatccaac tccacaatgt ccatgactgt gccatccgca
     1741 gcggcgacga tcatgttggg atccatcgga gctgcgcggt ccggatcgcg gaaaaacgcg
     1801 acagtgcaca aaaggagcag cacaaaaaac cagaacgccc acgccgagaa caatccgaaa
     1861 aggatcgcga gcaccgtaag aaaacccaaa atccagcgtg cttcccagaa agcttggagg
     1921 cgcataagag gagcctattt tccgagtttg aaacggctgg tcaagacgac ataatcaata
     1981 gagcaagcgt ttcggcctga accacaatat agtgggctcg gccgcggcaa agcgatcaat
     2041 tagtagcgca aacaacccgc tcaaagccac gagattattt gttgtttcga cgcctttttc
     2101 ggctatcctt cttatgtggg gcgtcgggcc ccatttctat ggcgcaagtt caagaggaaa
     2161 ttccggtcga aaacgttggt accggaatcg cctcaacgca aaaatacgac gcggcgcaga
     2221 tcgacaaact cgaaggtctc gaagcagtcc ggaagcggcc gggaatgttt attggagacc
     2281 cggacgaacg cggattgcat cacttagttt acgaagttct cgataattcg atcgatgaac
     2341 atctcgcggg gttttgtaca aaaatcgaag tggtcatcca cgtcgatgga tcgatctcgg
     2401 tgcgcgacaa cggccgcggt attccggttg atgttcatcc gaaatggaag atgccggcga
     2461 tcgagttggt gctgacgaat ctgcatgccg gcggaaaatt cggccaaggc gcatacaagt
     2521 attctggtgg acttcacggc gtcggtgcga agtgcacaaa cgcgctttcg gaatggttta
     2581 aggccgaggt ttcgcgcgaa ggcaaggtct atcatatggc cttcgccaaa ggcaaaacga
     2641 cggacaagct cacagtaatt ggcgaggtca aaaataaaaa gaccacaggc acgctcatca
     2701 ccttcttgcc tgatccgacg attttcacaa tcacgaccga gttcaagttc gaacgattgg
     2761 cagcgcgctt gcgcgagttg gcctttctta atcccggtct agagatcacg ctcaccgatg
     2821 aacgtctcga tccgccgaaa aaggagcgat ttttttacaa acacggaatc gaagagttcg
     2881 ttaggcagct gggtgaaaac aaacaggtcc tgcaccccaa gccgatcgtg atcgcacggc
     2941 agcgcgacga ggtttttgtc gatgtcgtgc ttcaatacaa cgacagctac aacgatcaga
     3001 ttttgccgtt cgcgaattcc atctcgaacc ccgacggcgg cacccatctc accggattcc
     3061 gcactgcgct cacaagggca atcaatcagt acgcaaaaca aaacagcctt cttaaggaca
     3121 aagacccctc cctctccgga gacgacgtac gcgaaggact aatcgccgtt ctcagcgtta
     3181 agctgcctaa tccgcggttt gaatcgcaaa cgaaggtgaa gctcgtcaac accgagatcg
     3241 acggaatcgt gaactcgacc gtgtacgacg gattgatgac tcacttcgac aagaacccgc
     3301 ctattgcgcg ccgtgttttc gaaaaggtcc ttaccgcggc gcgagcgcgc gaggctgccc
     3361 gtaaggcgag agaaactatt cgtaaaggtg cgctcaccgg cggtggtctg ccaggaaagc
     3421 ttgctgactg ttctgaacgc gatccggaat tcaccgagct ctacattgtc gagggcgact
     3481 cagctggcgg ctcggcgaaa cagggacgtg atcgccgcta ccaggcgatc cttcccatcc
     3541 gcggcaaact catcaacgtt gagaaagcac gcgaagatca gttccttaaa aacgctgaga
     3601 tccaggcaat ggtcacagcg atcggtgccg ggattggcaa accgaaggaa gagagcaacg
     3661 gcaaagacga aggcgtgttc gacatggcaa ggctccgtta cggccgcatc atcatcatga
     3721 cggacgccga cgtggatggc tcgcacattc gcactttgct actcacgttt ttcttccggc
     3781 agatgaccga gttggtgcgt gcaggaaaaa tttacatcgc gcaaccgccg ctttatcaga
     3841 tcaaacgaaa gaagcgcgag gaatatgtcg aagacgacgc gcggctgaat aaaattctca
     3901 tttcactcgg cgcagaggac gtacggctga agaatcttgc cgacaagaaa gaatttactg
     3961 cggcacagct gaaggatatt ctcgaatcgc ttgagaaact cgcaaaatta agcgaagcag
     4021 tgcgtcgcca cggcggcgat ttcgagacct accttgctca gcgcagttcc aagtccgcca
     4081 agcttcccaa ttatctggtg aaggtgcgcg acgggaacga ggaaagcgcg cattattttc
     4141 acgacgagaa agccgtgcgc aaatttcatc aggaaaatct ggatctcaat ttgttcgaca
     4201 ccgagatcgg acaggagttg ctcccgttaa gcgaggcgcc ggtgcgagcg gatggaacac
     4261 gccgacgcgg caggttagtc gagttgcacg aatctgctgc gatcgaaaaa atcatcgccg
     4321 aactggctcg caaaggtttg aaagtcgatc attacgccac cggcgatcgg ccgatcttcg
     4381 agttgatcga aggcgaaggc gagaaatcga tttcgcatcc gttgttttcc attccggaaa
     4441 tcttgcaaaa gattttggag attggccgtc gcggagtgca gatcaaacgg ttcaagggtc
     4501 tcggtgagat gaatgccaag gaattgtttg agaccacaat gaatcccgag aaacgcaaac
     4561 tgctgaa
//
LOCUS       DATDAJ010000138        13774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_854759, whole genome shotgun sequence.
ACCESSION   DATDAJ010000138 DATDAJ010000000
VERSION     DATDAJ010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 13774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13774
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_854759"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VIS53_03185"
     CDS             <1..200
                     /locus_tag="VIS53_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766822.1"
                     /translation="QDHAMMTAMLCAENILADAKLYDLWQVNSDAEYHEAGPASAEET
                     NGSALRLVPSRVVTPELAPEG"
     gene            complement(220..3087)
                     /gene="gcvP"
                     /locus_tag="VIS53_03190"
     CDS             complement(220..3087)
                     /gene="gcvP"
                     /locus_tag="VIS53_03190"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEY5766823.1"
                     /translation="MREPIFDVDSFARRHIGPNEEEVRAMLRDVGFDSVAALIDATVP
                     KDIRLGRQLNLPEAKSEGEALGELRTIAQKNKIARSFIGAGYYDCITPPVIQRNILEN
                     PGWYTAYTPYQAEIAQGRLEALLNFQQMIIDLTALDIANASMLDEATAAAEAMALCHA
                     VVPNRKTFFVDDNCHPQTIAVVRNRAKPLGIEIKIGDYPRFKFDSTVFGALVQYPASD
                     GAIYDYAEFVRKAHDADALVVVAADILALTLLKPPGEFGADVAVGNTQRFGVPLGFGG
                     PHAAYFATRDEFKRHMPGRLVGVSHDAEGRPAYRLALQTREQHIRRDKATSNICTAEV
                     LLAVIASMYAVYHGPKGLRAIAERVHRLTSRLADGLRALGCTVTHENFFDTVRVEVES
                     SEVTLDHAAKAGCNLRGLGPRAVGISFDETTAPQDIELLMSIFRGTNVRDFDDDNIGE
                     PPIRIPQFAIRTSEYLRHPIFNTHDTETEMLRYLKKLESRDLSLTTSMIPLGSCTMKL
                     NATAEMFPISWPEISKLHPFAPSEQAAGYMEIFRQLEDWLAEITGFAAISLQPNAGSQ
                     GEFAGLLAIREYHASRGEAHRNICLIPTSAHGTNPASAIMAGFKVVSIACLKDGDIDL
                     ADLRAKADDHARDLAALMVTYPSTHGVFEPTIREICDIVHAHGGQVYMDGANLNAQVG
                     LCRPGDYGADVCHLNLHKTFCIPHGGGGPGVGPIGVAKHLAKFLPARFSMRNRQSAID
                     NGVGPVAAAPWGSASILTITWMYIRMMGAAGLKRASEVAILNANYIAKRIDPYFPVLF
                     KGKHGLVAHECIVDLRQWRSAGIEVEDVAKRLMDYGFHAPTVSWPVGGTMMIEPTESE
                     PKHELDRFCNAMISIHAEMQAIANGKQDKQSNLLKNAPHTARQIASDKWDRSYSREQA
                     AFPAPWTRDHKFWPAVGRIDNVYGDRNLFCSCPPVEELETG"
     gene            complement(3124..5871)
                     /gene="ppdK"
                     /locus_tag="VIS53_03195"
     CDS             complement(3124..5871)
                     /gene="ppdK"
                     /locus_tag="VIS53_03195"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEY5766824.1"
                     /translation="MRFRSRKAAAGKRTRAPRYVYYFGDGHADGRGTMKALLGGKGAN
                     LHEMTRIRLPVPPGFTITTEVCSYFYDHNRSYPKQLEAQVAAAMAKVEQSTGKRFGDQ
                     ERPLLVSVRSGARDSMPGMMDTILNLGMNDEVVEIVAKKTKNKRFACDSYRRFLQMYG
                     DVVMGVQKRPGEDHEPFEAVIERLKDERYGKHDFPDVRLTVADLKELVQRFKALINER
                     TGKSFPQDPNEQLWGSISAVFGSWMNDRAIVYRRKYGIPHEWGTAVNVQTMVFGNMGE
                     TSATGVAFTRDPATGEKVFYGEYLINAQGEDVVAGVRTPHPIADLAKQMPAAHKELMN
                     VRSTLERHFKDMQDLEFTVEDNRLYILQTRNGKRTGHAAVRIAVDMVGEKLITKKDAV
                     RRVPPDSLSHLLAPVFDRKAVQNAKKIGAGLAAGPGAACGHVVFSAEEAVARAHRGEK
                     VVLARIETSPEDLRGMIAAEGILTARGGVSSHAALVARQMGKVCVCGATGIQIDYHKG
                     TLSANGTTLNRGDYISIDGTAGEVFAGEVATAPSEIIQVLVDGSLDPKKSVTYQEYAK
                     LMKWADEFRSLGVRANADTPEQVENAVAFGAEGIGLCRTEHMFFEGDRIDAMREMILA
                     GTKDERARALAKLLPYQRGDFIGIFTALNGLPGTIRFLDPPLHEFLPADHAQQNELAN
                     KLDMPVEQISRRVHELHEFNPMLGHRGCRLGITFPEISEMQARAIFEAAAEVQAKGIK
                     VHPEIMIPLVGFPRELKLQIDIVRRVADEVAKERGIKFKYLVGTMIEIPRAALLADQI
                     ARDAEFFSFGTNDLTQTTLGMSRDDSGSFLPAYAELDIVGSNPFATIDQKGVGRLMEI
                     TRDLGRKTRPDIKLGICGEHGGEPNSVKFCHRLGLEYVSCSPFRIPIARLAAAQAALE
                     S"
     gene            complement(6133..6342)
                     /locus_tag="VIS53_03200"
     CDS             complement(6133..6342)
                     /locus_tag="VIS53_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEY5766825.1"
                     /translation="MDNIIEAKELQIERKHFYVELRENDRGKFLRITEEAHGRRNSII
                     VPSTGIDEFTATIAKVLTNGETAPA"
     gene            6550..7962
                     /locus_tag="VIS53_03205"
     CDS             6550..7962
                     /locus_tag="VIS53_03205"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5766826.1"
                     /translation="MPHSIDPDSYRSPDRQRSAVPLPIEIESRTHDPYAAFRFGDFAL
                     FTAGNLLSITGRLMLAVAVEWEIYARTHSATALGLVGLAIVVPVVTLSLPAGHLADRF
                     SRKHIILVSQIFSAVTSLALALVSWKHLSIPQFAPLRGGNRALAAVATIFERHHPVFH
                     FDDASVPLIYLLLFIGASARTFSWAARSSFFPTLVPRDAFANAVTWNNSIFQIGSVVG
                     PAFSGLLIAYIGFPFVYLLDALCAFAFFLLVLLIRRSTQKRDQSDASTWKSLMAGLRF
                     VFSRNVILATITLDLFAVLLGGATALMPIFADQILHCGPVGLGWMRAMPAVGAFVMAL
                     LIAHLPPMKHAGKALLWCVTGFGVATILFGLSKVLWLSLGVLFLIGAFDSVSVIIRGS
                     IVQLITPDEMRGRVSSVNNIFIGTSNEFGAFESGLTAALFGPVISVVAGGIGTILVVL
                     GVGLWWPETRKIGALDRTLR"
     gene            complement(8033..8935)
                     /locus_tag="VIS53_03210"
     CDS             complement(8033..8935)
                     /locus_tag="VIS53_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766827.1"
                     /translation="MKRFALQSVSLASATLLMAASALADESSNWWPLTGEFTAEATYV
                     GEGDVERGPRKAVRNFDEIDSDIHLVLTPRTKFGVLRLGAEWERFSFGLPQNAALPNT
                     LQSFSAIFGLDMQFSDSILVRVETQPGLYNSGLGHLFWDDFNMPFVIGGTYIFSPDLQ
                     LVLGVSVDVERKYPVVPAAGVRWKIGPQWLLDAVLPKPRLVYEVTRDVSLYAGATVRA
                     ATFRVDDEFGVSHGIPRLNHAVLTYSEIRTGAGFDWKISPMITLTGEVGYQPYREFDF
                     YRAEVRYHHDGGAPYGTLSLHGAF"
     gene            complement(8939..9985)
                     /locus_tag="VIS53_03215"
     CDS             complement(8939..9985)
                     /locus_tag="VIS53_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766828.1"
                     /translation="MKPKMVSLQLPAFKNVLFVSLLSLAATIARGDPVSEMASFSVFD
                     KVDLAQLAKSDVKTAHGPPMRNSRFLTVQSCYVAPGSPAQQMEALRRWNPTRHSELKV
                     FQHTDLPSNPTPANFEKLRSAPGNASVRSFVAATQKLGPQLQVSKDEAKKFSAGTSGG
                     GGAIPAPVAAFWADVLAARTRAFASGGMAAEPPYDHSGPSVRASEEVNGLLREQEKIR
                     RQFSGLLGATGIGRGAGSLRPELYWELLDADDEGVVTLGASYNRGGSEGTYQAADVLY
                     YASGGYYVALTLYQLWPVTVEGKPSTLVWRGDMISSASLGSLRGVERLGSESVMMKNI
                     TKAVTSFRRDSGGR"
     gene            10056..11006
                     /locus_tag="VIS53_03220"
     CDS             10056..11006
                     /locus_tag="VIS53_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5766829.1"
                     /translation="MNEPVILLDHLSKSYGNVHAVQDLSLQIERGTIFGFLGPNGAGK
                     TTTMRMLCGLTHPTGGRATIEGSDVWKDRQIVRTKFGYVPQRFSLYRDLTVDENFRFF
                     GGAYGVPGAELEQRIERLLRVIDLEEKKDTAAQSLSGGMRQLLAIGCALIHDPRLLFF
                     DEPTAGLDPVHRQQIWNLLYDLSNEGKTIFVTTHYMDEVERCTEVGFIEGGRLLAKAP
                     PRALKSSFRSRLLEIDVEPLMPALVRLRGLPELLGVSLRSGGLRLYAPEPEKLIARWR
                     EDWPFSDLRLLGERWVEPDMEDVFTAYSQGYHGVLTELVP"
     gene            11003..12190
                     /locus_tag="VIS53_03225"
     CDS             11003..12190
                     /locus_tag="VIS53_03225"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5766830.1"
                     /translation="MKWLSFEAVASVAYKEFLHIYRDRRVLLLVLTLPPLFTLLFGHA
                     FETGELTGVPSLLVNQDNTPRAQEFIDIISKNKTFDWRRGSSEAKDNADLVAHGVQAT
                     LVIPAGWNESLENGDPKPLLLYLDGSDINTADAVEGSVRQSLGDFQLKQRDQMIENLP
                     EEVFELGKQLPVQIRKRFVSMMEMWSVDRKVLYNPKSRVIDYVVPGIIGLILQLLTVT
                     LMACTIARERESGTLYQLMVTSLHRREIVIGKMLPYLVVSAFLVVVIMVVSSWQFGVA
                     FYQLPALAIVCLLFLLCSLGLGLLISAFSRTQTQAIQFSVFFLLPVFVLSGAFAPLQQ
                     LPTAVRYISELFPLTHFCRAFRLVNMYRAGPEFYSGDLLVLLAGAVITFVGAVILLRR
                     IEQ"
     gene            12283..12663
                     /locus_tag="VIS53_03230"
     CDS             12283..12663
                     /locus_tag="VIS53_03230"
                     /inference="COORDINATES: protein motif:HMM:NF014132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HEY5766831.1"
                     /translation="MAVVAVVVCLGAVTVAAAGHQESTPQEVFDAMRGSFQPAKAKGV
                     HARYQWDLSGANGGEWWIDVNDGNYKMGKGKIPNPNVTFVAKDKDWVAICNDQISGTW
                     AYLTGRLKVRGDQNVARKLGEIFP"
     gene            complement(12660..13559)
                     /locus_tag="VIS53_03235"
     CDS             complement(12660..13559)
                     /locus_tag="VIS53_03235"
                     /inference="COORDINATES: protein motif:HMM:NF039394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6268 family outer membrane beta-barrel
                     protein"
                     /protein_id="HEY5766832.1"
                     /translation="MKIFRNLAMLFAFGVASAAAGPAEVILQPSPKPADENSHNLFNY
                     ETTYTFQSDFKESKLGHGDSIYNDFSYDHRFRIKGNWYFRAGVEYERYDFGGSDNGLP
                     DHLQALYGHLALEYDVNDHAGISVEADPGVYFQDDVSGNAFDVPGKAYVTLPLKKDKI
                     YATVGFGWGQFQDPAVAPGGGITWLINDKFRLQAVFPRPALVYQPNDDWDIRALGELN
                     FLGARTGEVHTTEQKLQLDNALVQYSEYRAGLQVGYSGFKPFKIIAGAGCTIQRNFDF
                     FRVEQSKRTDPAPYIRIAAEARF"
BASE COUNT         2857 a         3848 c         3853 g         3216 t
ORIGIN      
        1 accaggacca cgccatgatg acagcgatgt tgtgtgcgga aaatattctg gccgatgcaa
       61 agctttacga tctctggcag gtgaacagcg atgccgaata tcacgaagcc ggtcccgcgt
      121 cagccgagga aacgaacggc agcgcacttc gcctcgttcc cagtcgcgtc gttaccccgg
      181 agttagcgcc ggaagggtag cgcacgcgtc tcgcgtgctc tacccggtct cgagctcttc
      241 cactggcggg caagagcaga acagattcct gtcgccatag acgttgtcga tgcggccaac
      301 tgcgggccag aatttgtggt cgcgggtcca cggcgcgggg aaagctgctt gttcgcgcga
      361 gtaggagcgg tcccatttgt cggacgctat ttgtcgcgcg gtgtgcggtg cgttcttaag
      421 caaattgctc tgcttatcct gttttccgtt ggcgattgct tgcatctcgg cgtgaatgga
      481 gatcattgca ttgcaaaaac gatcgagctc gtgcttcggt tcgctctcgg tcggctcgat
      541 catcatcgtc ccgccaaccg gccacgaaac ggttggcgcg tgaaagccgt aatccatcaa
      601 acgctttgcc acgtcttcga cttcaatgcc tgcgcttctc cactggcgca ggtcgacaat
      661 gcattcgtgc gcgacgagac catgctttcc cttgaaaagg acgggaaagt acggatcgat
      721 ccgtttagca atgtaattgg cgttgagaat cgccacctcg ctcgcgcgtt tcaacccggc
      781 ggcgcccatc atgcgaatgt acatccacgt gatggtcaga atgctggcgc ttccccaggg
      841 cgctgccgcg actggaccga caccattgtc gattgccgat tgccgattgc gcattgaaaa
      901 acgtgccggc agaaatttag cgagatgttt agcgacgccg atcggtccca cacccgggcc
      961 gccgccgccg tgtgggatgc aaaacgtctt gtgcaagttc agatgacaaa catcggcgcc
     1021 gtaatcgccg gggcgacaaa gaccgacctg cgcattcaag tttgcgccgt ccatgtaaac
     1081 ctggccgcca tgcgcgtgaa cgatgtcgca aatttcgcga atcgtcggct cgaatacgcc
     1141 gtgcgttgat gggtaggtga ccatgagcgc ggcgagatcg cgcgcgtggt catctgcttt
     1201 cgcgcgaagg tctgcaaggt caatgtctcc atctttcaag cacgcgatcg acacaacctt
     1261 gaatcccgcc attatcgcac tggcgggatt tgtgccgtgc gccgatgtcg gaatgagaca
     1321 aatgttgcga tgcgcttctc cgcgcgacgc atgatattcg cggatggcca acagacctgc
     1381 gaattcgccc tgcgatccgg cattcggttg caatgaaatc gcggcgaaac cggtgatttc
     1441 cgcgagccag tcttccagtt gccggaaaat ttccatgtag cctgccgcct gttcgctggg
     1501 agcgaacgga tgcaatttgg aaatctcagg ccatgagatc gggaacattt ccgcggtggc
     1561 gttgagcttc atcgtgcatg agccaagcgg aatcattgac gtcgttaacg acagatcgcg
     1621 cgattccagc ttcttcaaat agcgcagcat ctcggtttca gtgtcatgcg tgttgaagat
     1681 cggatgcctg agatattcgg aagtgcggat tgcgaattgc ggaatgcgga ttggcggctc
     1741 gccaatgttg tcatcatcaa aatcacggac gttcgtaccg cggaagatgg acatcagcag
     1801 ttcaatgtcc tgtggcgctg tcgtttcatc gaaagaaatg ccgactgcgc gtggtccaag
     1861 tccgcgcagg ttgcaacccg ctttggccgc gtggtccaaa gtgacttcgc tcgattccac
     1921 ttcgacccga accgtgtcga agaaattctc gtgcgtgacc gtgcagccaa gggcgcgcag
     1981 accgtccgca agtcgactgg ttagccggtg aacacgctca gcgatcgcgc gcaacccttt
     2041 ggggccgtga tagaccgcat acatcgacgc gatgacggcc aggagaacct ctgccgtaca
     2101 gatgttactg gtcgctttgt cgcggcggat gtgttgctcg cgcgtttgca aggcgaggcg
     2161 atacgcaggc cgaccttcag cgtcgtgtga aacgccgacc agtcgaccgg gcatgtgacg
     2221 tttgaattca tcgcgcgtgg cgaagtacgc cgcgtgcggc ccgccgaatc ccagcggcac
     2281 tccaaagcgc tgcgtattgc cgacggcaac gtccgcgccg aattcgcccg gcggtttgag
     2341 taatgttagc gcaagaatgt ctgccgcgac caccaccagc gcatcggcat cgtgcgcctt
     2401 tcggacaaac tcggcgtaat cgtagatcgc gccatcgctc gcgggatatt gaacaagcgc
     2461 gccgaaaact gtgctgtcga atttgaaccg tgggtaatcg ccaattttga tctcgatccc
     2521 gagcggcttc gcgcggtttc gaacgacggc aatcgtttgg ggatgacaat tatcatcgac
     2581 aaagaacgtc ttccgatttg gaacgaccgc gtgacaaagc gccattgctt cagcagcagc
     2641 cgttgcttcg tccagcattg aagcgtttgc gatgtcgagg gcagttagat ctatgatcat
     2701 ctgctggaag ttcagcagtg cttcgagtcg cccttgcgcg atttccgcct ggtaaggcgt
     2761 ataagcggtg taccagccag ggttttcaag aatgtttcgc tgaatgacag gcggcgtgat
     2821 gcagtcgtag tagcccgccc cgatgaacga gcgcgcgatt ttgttcttct gtgcaatcgt
     2881 ccgtaattcg cccagcgctt cgccttccga tttcgcttcc ggcaaattca gttgccgtcc
     2941 gagacgaatg tccttcggaa ccgtggcgtc gatgagcgca gcgacgctat cgaaacccac
     3001 gtcgcgcaac atcgcccgaa cttcttcctc gttcggccca atgtgtctgc gcgcgaacga
     3061 atcaacgtcg aaaattggtt cgcgcatttg catcggaaga gactacggag cgcgagacgc
     3121 gcttcaactc tcgagcgctg cttgcgccgc cgctaatcgt gcgatgggaa ttcggaacgg
     3181 actgcaactc acgtactcaa gaccgagtcg gtgacagaat tttacgctgt ttggttcgcc
     3241 gccgtgttcg ccgcaaattc ccagtttgat gtccggccgc gttttgcggc cgaggtcgcg
     3301 agtaatttcc attaaacgtc caaccccctt ctgatcgatt gtcgcgaatg gatttgagcc
     3361 aacgatgtcg agttccgcgt acgcggggag gaaactgccc gagtcgtcgc gactcattcc
     3421 cagcgtggtc tgtgtcagat cgttcgtgcc gaagctgaaa aactcggcgt cccgtgcgat
     3481 ctggtcggcc agcaacgcgg cgcgcgggat ctcgatcatg gttccgacga gatatttgaa
     3541 ttttattcct cgttctttgg ccacttcgtc agccacgcga cgcacaatgt cgatttgcag
     3601 ctttagctcg cgcgggaatc ccaccaacgg aatcatgatt tcggggtgga cctttatgcc
     3661 tttggcttgc acttcagcgg cggcttcaaa gattgcgcgg gcctgcattt cggaaatctc
     3721 ggggaacgtg atcccaagac ggcaaccgcg atgacccagc atcggattga actcgtgcaa
     3781 ttcgtgaacg cgccgggaaa tttgttcaac cggcatgtcg agtttgttcg ccagttcgtt
     3841 ttgctgcgcg tgatcggccg gcagaaattc gtgcaacggc ggatccagga aacggattgt
     3901 tccaggcaaa ccatttagcg cagtgaaaat gccaataaaa tcaccgcgct gatacggaag
     3961 cagtttcgcc agagctcgcg ctcgctcgtc ttttgtgcca gccagaatca tttcccgcat
     4021 cgcgtcgatc cgatcgcctt cgaaaaacat gtgttccgtg cggcagagcc caattccttc
     4081 cgcgccgaat gcgacagcgt tttcgacctg ctcaggcgta tcggcatttg cacgcacgcc
     4141 gagggagcgg aattcatccg cccatttcat caatttcgcg tactcctgat acgtgacgct
     4201 tttcttcgga tcgagcgagc cgtccacgag tacctgaata atctccgacg gtgcggtggc
     4261 gacttcccct gcaaacactt cgccggcggt accgtcgatg gaaatgtaat cgcctcgatt
     4321 caatgtggtg ccgttcgcgc tgagtgttcc tttgtggtag tcgatctgga tcccagtggc
     4381 gccgcacacg cacactttgc ccatctgccg cgcaaccagg gccgcgtgcg aagaaacgcc
     4441 gccgcgcgcg gtgagaatcc cttcagctgc gatcatgccg cgcagatctt ccggtgacgt
     4501 ttcgatgcgg gcgagcacga ccttttctcc gcgatgcgca cgcgcgacag cttcttctgc
     4561 gctgaaaacg acatggccgc atgccgcgcc cggtccagca gcgagacccg ccccaatttt
     4621 ctttgcgttc tgcacagctt tgcgatcaaa aactggtgcg aggagatgcg agagcgaatc
     4681 gggcgggaca cggcgcaccg cgtccttttt ggttatcaat ttttcgccga ccatatcaac
     4741 ggcgatacgc accgccgcgt gaccggtgcg ttttccgttt cgggtctgca aaatgtacag
     4801 acgattatcc tcgaccgtga attcgaggtc ttgcatgtcc ttgaagtgcc tttcaagggt
     4861 gctgcgaacg ttcatcaact ccttgtgcgc tgctggcatt tgtttcgcca gatcggcgat
     4921 cggatgcggg gtgcgcacgc cagcgaccac gtcttcgcct tgcgcgttga tgaggtattc
     4981 gccgtagaaa actttttcgc cggtagccgg gtcgcgtgtg aatgcgactc ccgtcgcgct
     5041 ggtctcgccc atatttccga acaccatcgt ctgaacattc actgctgttc cccactcgtg
     5101 cgggatgccg tatttccgtc gatacacgat ggcgcggtcg ttcatccatg agccgaatac
     5161 ggcgctaatc gagccccaga gttgttcatt cggatcctga ggaaaggatt ttccggtgcg
     5221 ctcgttaatc aatgccttga accgctgcac aagctctttg agatcggcta cggtcaatcg
     5281 cacatcgggg aagtcgtgct tcccgtaacg ttcatccttc aagcgttcaa ttactgcttc
     5341 gaacggctcg tggtcttcgc ccggccgttt ttgtacgccc atcacgacgt cgccgtacat
     5401 ctgaagaaat cgccggtaag aatcgcaggc aaaccgcttg tttttcgttt tcttcgcgac
     5461 gatctcgacc acctcatcgt tcatgccgag attgagaatc gtatccatca ttcccggcat
     5521 ggaatcgcga gcgccagagc gcacggacac cagcagaggc cgttcctggt cgccgaacct
     5581 tttgccggtg gattgttcca ccttggccat cgccgccgcg acttgcgcct ccaattgctt
     5641 gggatacgaa cgattgtgat cgtaaaaata actgcaaacc tcagtggtaa tggtgaatcc
     5701 cggcggcaca ggcagccgga tcctcgtcat ctcatggagg tttgcgcctt tgccgcccag
     5761 caaagctttc atcgtgcctc ttccgtccgc gtggccatcc ccgaagtaat aaacgtaacg
     5821 cggcgcgcgc gttctcttcc cagcggcggc tttccgcgat ctgaatcgca tcggtttccg
     5881 cctgcgttga agtcgttttc gaagattaga ttttcgtttt gtggccataa tttgcagcag
     5941 cagcgactgc tggaatcacg aagcgccaaa ctaaattcgg gcgtcccgat gtcaacgggc
     6001 acggcaaaag tggatcgtcc tgtcctcaag acgacggcag ttggatcgct gaaggcgcag
     6061 atatcaggcg gcgaacccgc ggcccctagt accaaacgcg ttgaggacca cgcgttgcac
     6121 cttgttcagc ggttaagctg gcgcggtttc gccgtttgta agaactttag caatggtcgc
     6181 cgtaaactca tcaatgcccg tgctcggcac gatgatgctg ttccggcgcc catgagcttc
     6241 ctcagtgata cgcaagaatt taccgcggtc gttctcccgg agctcgacat agaaatgctt
     6301 gcgttcaatc tgcagttctt tcgcctcgat gatgttgtcc attttgcctt aagggcgccg
     6361 agtttaggca gtggaactct gaaatggaag aaaaatccgc ggcctttaag ggaatttctt
     6421 accgggccac tggtggccaa aaccacggta attgccggct cctgatcgtt tctcggccat
     6481 gcacagaggg ttgctgtgct gcccgctcaa cctagactct cgtgcgcgtt tgatcttggg
     6541 cccttaacca tgcctcattc catcgatcct gactcgtatc gatcgcccga ccggcaacga
     6601 tccgccgttc cgctgccgat cgaaatcgag tccagaactc acgatccata cgctgcgttc
     6661 cgcttcggtg atttcgctct gtttacagcc ggaaatttac tgtcgattac tgggcgattg
     6721 atgctcgcgg tggcggtgga atgggagatt tatgcccgga cgcactcagc gactgcactc
     6781 gggcttgttg gcttagcaat cgtcgtccca gtggttacgc tttcgctgcc ggccggccat
     6841 ttggcggatc ggttcagccg caagcacatc atccttgtga gccagatctt tagcgcagtc
     6901 acgtcgctgg cgctcgctct agtttcctgg aaacaccttt ccattcccca attcgcgcca
     6961 ttgcgagggg gcaatcgcgc cctcgcggcc gttgccacga tattcgagcg acatcatcca
     7021 gtattccatt tcgatgacgc ttcagtgccg ctgatttatc tccttctttt catcggagcg
     7081 tcggcgcgca cattcagttg ggctgcgcgc agctcgtttt ttccgaccct ggttccgcgt
     7141 gacgcattcg cgaacgccgt cacctggaat aatagcattt ttcaaatcgg atctgtggtt
     7201 ggtccggctt tcagcgggct cttaatcgcg tacatcgggt ttccgttcgt ttatttgctg
     7261 gatgcgctct gcgcgttcgc atttttcctg ctggtcctac tcatccgccg cagcacgcaa
     7321 aaaagagacc agagcgacgc gagcacgtgg aagagtctca tggctgggct gcgatttgta
     7381 tttagcagga acgtaatcct cgccaccatt accctggatt tgtttgccgt tctgctgggc
     7441 ggtgcgacgg cgctgatgcc tatctttgcg gatcaaattc ttcactgcgg cccagtgggt
     7501 ctcggctgga tgcgcgcgat gccggcagtc ggggcttttg tgatggcgct gctcattgcg
     7561 catctgccac cgatgaaaca cgccggcaaa gcgttgctgt ggtgcgtgac cgggtttggc
     7621 gtcgccacaa tcctgttcgg tttatcgaaa gtactctggt tatcgctggg cgtgctcttt
     7681 ctcatcggag cgttcgacag cgtgagcgtg atcatccgcg ggtcgatcgt gcaactgatt
     7741 acgcccgatg aaatgcgcgg acgcgtgtca tccgtgaaca acattttcat cggcacatcg
     7801 aacgaattcg gcgcgttcga atcgggattg accgcggcgc tatttgggcc ggttatttcg
     7861 gtcgttgcag gagggatcgg aacgatcctt gttgtgctgg gcgttggatt gtggtggccg
     7921 gagacgcgaa agatcggcgc gctggatcgg actctgcggt gaacctgtag ggcgtctgtg
     7981 tcaggcgccg tttcccggcg tttcacagaa acgccctaca aaatagacgt gactaaaatg
     8041 cgccgtgcaa tgaaagcgtt ccgtacggag cgccgccatc gtggtggtag cgcacttccg
     8101 cgcgataaaa atcgaactca cggtacggct ggtacccgac ctcgccggta agcgtgatca
     8161 tcggtgaaat cttccagtca aatcccgcgc ccgttcgaat ctcgctgtac gtaaggactg
     8221 cgtggttgag tcgcggaatt ccgtgcgaaa ctccaaattc gtcgtctaca cggaaagtcg
     8281 ctgctctcac ggttgctcct gcataaagtg acacgtcacg agtcacttca tacaccagcc
     8341 gtggctttgg caacacggca tcaagcaacc actgcggtcc gattttccag cgaactcccg
     8401 cagcaggaac caccgggtat ttccgttcga catcgacgct gacgccgaga acaagctgca
     8461 gatcagggct gaaaatgtag gtgccgccga tgacaaaagg catattgaaa tcgtcccaaa
     8521 acaaatgccc cagtccggaa ttgtagaggc caggctgagt ttcaacccga acgagaatcg
     8581 aatcggaaaa ctgcatgtcg agtccgaaaa tcgcgctaaa agattgcaac gtgttgggca
     8641 gggcagcatt ttgtggaaga ccaaacgaaa accgttccca ctctgcgcca agcctgagca
     8701 cgccaaattt cgtccgtggt gtaaggacca ggtggatatc cgaatcgatc tcgtcaaaat
     8761 tgcggacggc cttgcgggga ccgcgttcca cgtcgccttc gccgacgtac gtcgcttccg
     8821 ccgtgaattc ccctgtgagc ggccaccagt tgctgctttc atcggcaaga gccgacgcag
     8881 ccatcaaaag agttgcgctg gccaatgaaa cagattgcag tgcgaagcgt ttcacttgtt
     8941 aacggcctcc gctgtctctg cgaaacgagg taacagcttt ggtgatattt ttcatcatga
     9001 ccgactctga tccaagccgt tcaactccac gcaagcttcc caatgaagcg gacgaaatca
     9061 tatcgccgcg ccagacaagc gtcgacggtt ttccttccac ggtaacaggc cacagctgat
     9121 agagtgttag cgcgacatag taaccgccgc tcgcgtagta aagcacgtct gcggcttggt
     9181 aagttccctc agagccaccc cggttgtaag atgcgcccaa tgtcactacg ccttcatcat
     9241 cagcatcgag aagttcccag taaagctccg gtctgagtga tccagcgccg cgaccgatcc
     9301 ccgtcgcacc gagtaatccg gaaaactgcc gccgaatctt ttcctgctcg cgtaggagtc
     9361 catttacctc ctcacttgcc cgaaccgacg ggccgctgtg atcgtacggc ggttctgcag
     9421 ccattccacc ggatgcgaaa gctctcgtcc gcgcggcgag tacatctgcc caaaacgcag
     9481 cgaccggcgc tggaatggcg cctcctccac ctgaagttcc cgcggaaaac ttctttgcct
     9541 catccttact gacttggagc tgagggccga gcttctgcgt cgcggctacg aatgaacgca
     9601 ccgacgcgtt tccgggcgca cttctcaatt tctcaaaatt cgcaggtgtc ggattcgatg
     9661 gcagatcggt gtgctgaaaa acctttaatt cgctgtgcct ggtcggattc catcggcgca
     9721 acgcctccat ctgttgagca ggagaacccg gcgcgacgta gcagctttga accgtgagga
     9781 aacgtgagtt tctcattggc gggccatgcg ccgttttgac gtcgcttttg gccaactgcg
     9841 cgagatccac cttgtcgaag acggaaaacg aggccatctc ggaaactggg tcgccgcgcg
     9901 cgattgtcgc agcaagcgat aagagcgaca cgaaaagcac gtttttaaat gcggggagct
     9961 gtaggctgac catcttaggt ttcattagca aataagggtg actctcaatg gctgatggtt
    10021 gcaaattttc gggatcatcg caataaggtt tcatcatgaa tgaaccggtg atcctgctag
    10081 accatttgag caagagttac ggaaacgttc atgcggtgca ggatctttcc cttcaaatcg
    10141 agcggggaac gatctttggt tttctcgggc cgaatggcgc tggcaagaca accaccatgc
    10201 gaatgttgtg cggccttact cacccgaccg gcggccgcgc gacgatcgaa ggctcagacg
    10261 tctggaaaga tcgccagatc gtgcggacaa agtttgggta tgtcccccag cgctttagtc
    10321 tctaccgtga cctgaccgtc gatgagaatt ttcgattttt cggcggtgct tacggtgtgc
    10381 ccggcgctga gctggagcag agaatagagc gcctgttgcg cgtcatcgac ctggaagaaa
    10441 aaaaagacac ggcggcgcaa agcctttcgg gaggaatgcg ccaactgctg gcgatcggtt
    10501 gcgccctgat ccacgacccg cggctgctgt tttttgacga gccgaccgcg gggcttgacc
    10561 cggttcaccg gcagcaaatc tggaaccttt tgtacgatct gagcaacgaa ggaaaaacga
    10621 ttttcgtcac aacgcattac atggacgaag tggaacgctg cacagaagtc ggctttatcg
    10681 agggcggcag gctgctggca aaagctcctc cgcgcgcttt gaagtctagc tttcgcagtc
    10741 gattgctcga gatcgacgtt gaaccgctca tgccggcgct cgttcggctg cggggtcttc
    10801 ccgagttact cggtgtctca ttgcgcagcg gtggtttgcg gctgtacgcg ccggaacctg
    10861 agaagttgat tgccaggtgg cgcgaagact ggccattttc ggatctgcgt ttgctgggtg
    10921 aacgctgggt agagcccgac atggaggatg ttttcacggc gtactcgcag ggttatcacg
    10981 gcgttttgac agaactcgtt ccatgaaatg gctatcgttc gaagctgttg ccagtgtcgc
    11041 gtacaaagaa ttcctgcaca tctaccgcga ccgccgcgtg ctgctgctcg ttcttacgtt
    11101 acccccgctt ttcacactgc tcttcggcca cgcttttgaa acaggcgaac taaccggggt
    11161 accgagtttg ctggtaaatc aggacaacac gccgcgagca caggagttca tcgacatcat
    11221 ttcgaagaac aagacattcg actggcgccg cggatcatct gaagcaaaag acaacgcaga
    11281 tttggttgct cacggcgtgc aggcaacgct cgtcatcccg gcggggtgga acgaaagtct
    11341 ggagaatggc gaccccaaac cactgctgct ttatctcgat ggcagcgata tcaacacggc
    11401 cgatgccgtg gaaggcagcg tgcgacagag ccttggagat tttcaattga aacagcgcga
    11461 ccaaatgatt gagaacttgc ccgaagaagt cttcgagctt ggcaagcagc tcccggtcca
    11521 aatacggaaa cgctttgtct caatgatgga aatgtggagt gtcgatcgca aagtgcttta
    11581 caacccgaag tcacgagtca tcgactacgt cgtgcccggg atcattgggc tgattctgca
    11641 actgctgacg gtgacactga tggcgtgcac gatcgcgcgc gagcgagaat caggcactct
    11701 ttaccaattg atggttacgt cgctgcatcg ccgtgagatc gtgattggca aaatgttgcc
    11761 gtatctcgtt gtttctgcat tcctggtggt ggtcatcatg gtggtgagca gctggcagtt
    11821 tggcgtagct ttttatcagt tgccagcgct ggcgattgtc tgcctgctgt ttctactttg
    11881 ctcgctggga ttgggcttgt tgatctcggc gttttcgcgc acgcaaaccc aggcgattca
    11941 gttctctgtt ttttttctac tgccggtatt tgttctctca ggcgcgttcg cgccacttca
    12001 acagctacca acggcggtcc ggtatatctc cgagcttttc ccgctcacac acttctgtcg
    12061 tgcgtttcga ctcgtgaata tgtatcgcgc ggggccggaa ttctatagtg gcgaccttct
    12121 ggttctgttg gctggggcag tgatcacatt cgtcggcgcc gtcatcctgc tgcggcgcat
    12181 tgagcagtga gaccgggaga atgatgaagc acgaataaca aataacgagg gaatcacaaa
    12241 atgcgcagag acgtgacaag caaattccgc ttgtttgggt cgatggctgt cgttgctgtg
    12301 gtcgtttgtt tgggtgcagt aaccgttgcg gcggctggcc accaagagtc aactccgcag
    12361 gaggtcttcg acgcgatgcg cggcagtttc cagcctgcca aggcaaaagg cgtgcacgcg
    12421 cgctaccagt gggacttgag cggcgcgaac ggtggcgaat ggtggatcga cgtaaacgac
    12481 ggcaactaca agatgggcaa gggaaagatc ccgaatccga atgttacgtt cgtcgccaaa
    12541 gacaaggatt gggtcgccat ttgcaatgac caaattagcg ggacgtgggc ttatctcact
    12601 ggccgactaa aggttcgcgg cgatcagaat gtagccagga agctcggcga aatttttcct
    12661 tagaatctcg cttctgccgc gatcctgatg tacggcgctg gatctgtcct cttcgactgc
    12721 tcaacacgga agaaatcgaa atttcgttgg attgtgcacc ctgcgcctgc aatgatctta
    12781 aacggcttga aaccggagta accgacctgc aaaccggcgc gatactcact gtattgaacg
    12841 agagcgttgt ctagttgcag tttctgctct gtggtatgca cctcacccgt gcgagcgcca
    12901 agaaagttaa gttcccctag tgcacgtatg tcccaatcgt cgtttggctg atacaccagc
    12961 gcaggtctgg gaaacacagc ctgcaagcga aacttgtcgt taatgagcca ggtgatgccg
    13021 ccaccggggg cgacagccgg atcttggaat tggccccagc cgaaaccgac cgtggcgtag
    13081 atcttgtcct tctttagggg gagcgtcaca taagctttcc ccggaacatc gaaagcattc
    13141 ccactgacgt catcttggaa gtacactcca ggatcggcct cgacgctgat tccggcgtgg
    13201 tcgttcacgt cgtactccag agccaggtgt ccatagagcg cctgcaagtg atcaggcaag
    13261 ccgttgtcgc tcccgccaaa atcatagcgt tcgtattcga cgccggctcg aaagtaccag
    13321 tttcccttga tccgaaaccg gtggtcataa ctaaaatcgt tataaatcga atccccatga
    13381 ccgagtttgg attccttaaa atcgctctgg aacgtgtacg tcgtctcgta attaaagaga
    13441 ttgtgtgaat tttcgtccgc cggcttgggt gaaggctgaa gaataacctc tgctggtccc
    13501 gctgccgcgg acgcaactcc gaaggcaaac agcatggcga ggtttcgaaa tattttcaca
    13561 ggctaaaatg atccggccat cgaaatatcg gatgaagaag gtgaaaccga tgtatcgaag
    13621 gggcaactat tttagcaagg aatatttcga ttgaggtaac tctgcggagg tcgttccctt
    13681 ctcctggaag gattcacccg cgtcgcgttc ggcgcgcatt ttctcactaa tgtgctcgcg
    13741 ccaatgtttt tcggaattat ttggctagtg ttgc
//
LOCUS       DATDAJ010000139         2739 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_857261, whole genome shotgun sequence.
ACCESSION   DATDAJ010000139 DATDAJ010000000
VERSION     DATDAJ010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_857261"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..333)
                     /locus_tag="VIS53_03240"
     CDS             complement(<1..333)
                     /locus_tag="VIS53_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma-24"
                     /protein_id="HEY5766833.1"
                     /translation="MIQGFFADLIETRAYARADREKGRFRSFLLGTLKHFAADVHDRG
                     RALKRGGGMILTNLDDQATAEAEAQIARATKWQPEEVYDREWAALLLRQAVDRLTQEC
                     ALTGKTDLL"
     gene            666..1277
                     /locus_tag="VIS53_03245"
     CDS             666..1277
                     /locus_tag="VIS53_03245"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEY5766834.1"
                     /translation="MISLQKRFLFVHIPKTAGNSIQSVLRNYSEDQLVALRKEQDGIE
                     RFGLRNPKYEIKKHSTLSEYRDALGDQQFRDLNKFTCVRNPWDRMVSYYFTPTQNPET
                     WDRKKFRGIISKAVSVADYLRLDKGDEDPFANVDYIMRFESLADDFRIVCTAIGISPP
                     TLPQYNRSNREHYSKYYDDELREFVRARFAEEIERFNYTFEEQ"
     gene            complement(1290..2702)
                     /gene="cysS"
                     /locus_tag="VIS53_03250"
     CDS             complement(1290..2702)
                     /gene="cysS"
                     /locus_tag="VIS53_03250"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEY5766835.1"
                     /translation="MPLRFFNTYSREIEQFEPRNPTARPVRMYTCGPTVYSRAHIGNF
                     RAYIFEDLLQRHLELRGYKVHRVMNITDVEDKTIRGAREASVPLQKFTEQFKEAFFED
                     AHTLRIKRADEYPAATDQRYIDRMIEMISALISKGLAYQADDKSVYFRINKFPDYGKL
                     AHFDLTQLQSTGRVKHDEYDKEHIGDFALWKAWDEADGDVKWDSPWGPGRPGWHIECS
                     AMSMALLGDEIDIHCGGVDNIFPHHEAEIAQSEGVTGKKFVRYWLHCAHLLVDGQKMA
                     KSLGNFYAVPDVMAKGYTGRELRYALLRVHYRVPLNFTWEGMNEARESLARVDEWLAR
                     LREIAKSGNLQHPTANPTTAFEDALDDDLNISAALGFLFESIRETNRAMDQNEMDAAS
                     ANTWLEWWKRINTVLDLEADTDVAIPGEVAQLAEQRENARREKNWKRSDELRERISAL
                     GWEVRDTKDGSKLTRGARNA"
BASE COUNT          598 a          761 c          737 g          643 t
ORIGIN      
        1 aagcaggtct gttttgccgg tgagtgcgca ttcttgcgtg agccggtcca ctgcttgccg
       61 caaaagcaag gctgcccact cacgatcgta aacttcctcc ggttgccatt tcgttgctcg
      121 cgcaatttgc gcctccgcct ctgcggtagc ttgatcgtcc aagttcgtaa ggatcatacc
      181 gccgccacgt ttcaatgcgc gcccacgatc gtgcacatcg gcggcgaaat gtttcagtgt
      241 gccgaggaga aatgaacgga accttccttt ctcgcggtcg gcgcgggcgt atgcacgagt
      301 ttcgatgagg tcagcgaaaa acccttggat caaatcccgg gcatcctcgg caccacatcc
      361 ttgccggcgt aagaaggaat agagcgggcg ccaataaatt tggcagagtt ccgaaagcgc
      421 attgaatgca tgactggaca ccgtcgccga attgcccgct tcgaggacta ttgaccaacg
      481 agtcgaggcg aatgattcat accgactttc cgcctcgccg cgagggggac ccggcgatgc
      541 tttcacgtgt gaacgacaat aagtagcacg tggcttagtg gcaagacata agcaacttgg
      601 gacagtgcag ccccgtgccc cccgctcgcg tcacggcaaa acacgcctta gactgcgacc
      661 gagggatgat ctcgctgcag aaacgtttct tgttcgttca cattccaaaa acagccggga
      721 actcgattca gagcgtcctg cgcaattact cggaggatca actcgttgct ctacgaaagg
      781 agcaggacgg gatcgagcgg ttcggactgc gcaatccaaa atacgagatc aagaaacact
      841 cgacgctgag cgagtatcgc gatgccttgg gagaccagca atttcgcgat ctgaataagt
      901 tcacctgcgt gcggaatccg tgggatcgaa tggtgtcgta ttatttcacg cccacgcaaa
      961 atcccgaaac ttgggaccgg aaaaaattcc gcgggataat ttccaaagcc gtctcagtgg
     1021 cggactattt gcggctggac aagggcgacg aggacccgtt cgcaaacgtc gattacatca
     1081 tgcggttcga aagtctggcc gacgactttc gaattgtgtg cacggccatt ggcatttcgc
     1141 caccaaccct gccgcaatac aaccgctcaa atcgggagca ttattcaaaa tattacgatg
     1201 acgaacttcg cgaatttgtg cgcgctcggt tcgctgagga gatcgagcga tttaattaca
     1261 cgttcgaaga gcaatgaagg caaaatctgt tacgcgtttc gagcgccgcg cgtgagcttt
     1321 gacccgtctt tcgtgtcgcg gacttcccag ccaagcgcag agatccgctc acgcagttcg
     1381 tcgctgcgtt tccaattttt ttcgcgccgt gcattctcgc gttgttctgc gagctgcgct
     1441 acttcgccag gaatagcgac gtcagtatca gcttcaagat caagaacggt gttgatccgt
     1501 ttccaccact ccagccatgt atttgccgaa gccgcgtcca tttcgttttg atccatcgcg
     1561 cgattggttt cgcgaatgga ttcgaataga aaaccgagcg cagcagaaat gttgagatcg
     1621 tcatccagcg cgtcttcaaa agcagtggtt ggattggctg ttgggtgttg gaggtttccg
     1681 ctttttgcga tttctcttag ccgcgccagc cactcatcga ctcgggctaa cgactcgcgg
     1741 gcctcattca ttccttccca ggtgaaattc aaaggcacgc gataatgcac acgcagaagc
     1801 gcgtaacgga gctcgcgtcc agtataacct ttagccataa catcgggtac ggcgtaaaaa
     1861 ttgcctaacg actttgccat tttctggccg tccaccagca gatgcgcgca gtgcagccag
     1921 tagcgcacga acttctttcc ggttacgcct tcgctctgcg cgatctccgc ttcgtgatgc
     1981 ggaaagatgt tatcgacgcc gccgcagtgg atgtcgatct catcgcccag caacgccatc
     2041 gacatcgcgc tgcactcgat gtgccagccg ggacggcccg gtccccaggg ggaatcccat
     2101 ttcacgtcgc cgtctgcttc gtcccaagct ttccacaagg caaaatcgcc gatgtgttcc
     2161 ttgtcgtatt cgtcatgctt cacgcggcct gtcgattgca actgtgtgag atcgaagtgc
     2221 gcgagctttc cataatccgg aaatttgttg atgcgaaagt aaactgattt gtcgtcggcc
     2281 tggtaggcga gcccttttga aatcagagca ctgatcatct cgatcattct gtctatataa
     2341 cgttggtcgg tcgcagccgg atattcgtcc gcgcgcttga tacgcaacgt gtgggcgtct
     2401 tcgaagaacg cctctttgaa ttgttctgtg aacttttgca gcggaacgct ggcctcgcgc
     2461 gcgccgcgta tggtcttgtc ctccacatct gtgatattca tcacgcgatg caccttgtag
     2521 ccgcgcagtt ccaagtgccg ttgaagcaga tcttcgaaga tgtaggcgcg gaaatttcca
     2581 atgtgcgccc ggctgtacac ggtcggtccg cacgtgtaca ttctgactgg acgcgccgtc
     2641 ggattgcgtg gctcgaactg ctcaatttcg cgcgagtagg tgttgaaaaa tcgcagcggc
     2701 atgtgcagta cggtagcggc ggttcagctg aaccgccaa
//
LOCUS       DATDAJ010000140         9029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_860527, whole genome shotgun sequence.
ACCESSION   DATDAJ010000140 DATDAJ010000000
VERSION     DATDAJ010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9029
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860527"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..744
                     /locus_tag="VIS53_03255"
     CDS             <1..744
                     /locus_tag="VIS53_03255"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEY5766836.1"
                     /translation="ASCLDAAQLKEARVTQVVKDVKLGSPQAAPRQVTVGESLRDGDA
                     INTGVTGRSELTFADQTIARLGAKTNVSVSDGTRTIDLAEGAVLFQIPKGAGRLKMKT
                     AAIAVESTGATGIVERHGQFYVKVLVLEGTVRCYLTNRLGESLLLQPGQILITKPDVT
                     ALPEPADFDIAREMKTCLLVREFQPLPSQGRIESEEQKQLNLIAKGTYIPSNLVILGR
                     GTQVTVVNAPSTTPSPKPVTNTGQQSRTP"
     gene            799..4332
                     /locus_tag="VIS53_03260"
     CDS             799..4332
                     /locus_tag="VIS53_03260"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HEY5766837.1"
                     /translation="MKKIFAGTQYTKFIVAVSALTWTIAIADSAHGAQLQEARVTQIV
                     NDVKLLLEQGAPRPAVVSDLVRRGNAVRTGTQSRSELTFADLTITRLGANTIFSFKEG
                     TREMNLIDGAILFQVPKGSGGATIRTVGVTAAITGTTGIGEFHPATANRPLPVSKWLC
                     LEGTFHLYLANGQSLELGPGKMVTTDGNSFSKVMTFDIAKLVSTSLFFTGFDQPLASM
                     NLIMLESQNQIASLFAISTTNPLDPARIVNVTSQAIVAEETQTPPSVTPTPPITPTPP
                     VTPTPPPPTPSKFGTPSVISSPVPYLITNGTVITTDPSITSNGVTDYGKIYRGQADDG
                     AFSLWAFGSTSAFDTALRIDDIFFADPSHLSIAVFKFQSLSLTGDPTIDTSNGATKLA
                     LIGVDRISSGPPGGSLTFTGLDLLLLATVNGSINLTSDVSFQDLKELVMYARGAGSDL
                     TINSPISNIGILGLVAEDSIRLTNPGTMSVGKLDAITGGDLVLQIGDSLLLNGRVSLD
                     VIVLPGASVATGVNLTLNATNDFINNSATQFSRLAITNRDHIGGDASIAVRATNISTA
                     NNLDVQIANQAGGHIGENALINIRASNDINIVGDATFQILNNDSGHIGGNGNISVTTG
                     GDGDLTANSIFAFVNNRNAGTIGTGANIDFDIGAALTIQEDAVFGISARNDGTDGGTI
                     GSLATVNVNAASVSIGGFFQTFISTNGGGRIQGDAVNSVITSGNLTAQQGILVTIEDT
                     IFGGTGNFTGGRIEGDAKVSLNAQNIATPSTNSGTPGTDLMAIEASIYPNASGRVGGN
                     AIVDVSASQNISAPGSVLFWIANGNYLDLGGGTIGGDARVNVSAASLSTGDLFAQILN
                     YGGASIGGDAAIDITADTLSVGGDLDSKIDNSSSGTIGRNATIDMNVSGSATVTTDAT
                     FQILGSDGAQTAAINLNGGNYNVGGTFLSYIDGNGRITLNNASAHADVLKAGVFGANG
                     VLNIGGGTLSADTTLKLYAPGSNGQLNFVSNVTLGGNSAKILAANSVTIFNNVVVTIG
                     GKNPADVYTGFTGEIPNANYTGFGGNGSTTGTFGGAGANNPQPIEKAPPFDSTNHVTS
                     SSKHGGGGRLANNTINVSSSDELLALLDHAAPGPGGKITVPPSKKRNNLKNSSRIAAA
                     GRANASNRLNVNRRAMDMRTASSSVTKHSPQ"
     gene            4404..5420
                     /locus_tag="VIS53_03265"
     CDS             4404..5420
                     /locus_tag="VIS53_03265"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEY5766838.1"
                     /translation="MSSASEFLCPRCKGPLKDVRTSGGVFYGCDVCGGRAVTIELLRK
                     RFTPESINPLWLHAMRGEGRVGLPCASCQQPMIGVALSDRAKIHVDVCQHCHFIWFDA
                     HEVDTLVPRQPEPVAPELPQKAREMLAIAEVERLAEQAEGPDLDSAAPDESWKQIAAF
                     LGMPVEFDAPEEQRKPWATWLLSAAIICASLLAFSNLRELVQRFGLIPAEAARLNGLT
                     FVTSFFLHAGIIHLAGNMYFLLAFGHAVENFLRPLRYLVLIALAAFIGDLAHIALDPR
                     SQTPCVGASGGIAGVITFYALNFPRMRLAFLMRWGFVWFRWIRLPAWFVFVLWILFQI
                     IGHS"
     gene            5726..6112
                     /gene="rplT"
                     /locus_tag="VIS53_03270"
     CDS             5726..6112
                     /gene="rplT"
                     /locus_tag="VIS53_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEY5766839.1"
                     /translation="MPRATNAPASRARRKRMLKKAKGYRGRRSKLFRYAKDAVMKAQY
                     WAYRDRKTRKRTFRYLWIQRLNAAARANGMTYSRLAEGLKAAGIGLDRKILADLAVTD
                     EAAFKSIIDQAKRALEDKAKSKKKAA"
     gene            6190..7203
                     /gene="pheS"
                     /locus_tag="VIS53_03275"
     CDS             6190..7203
                     /gene="pheS"
                     /locus_tag="VIS53_03275"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY5766840.1"
                     /translation="MHPLEQLRDDALREIEAARDEKSLEGVRVKYLGKSGSISEWGER
                     MKTLGKEERPVVGKLLNQARNAVSAALDQRGGKGRAEKESDALARIDISLPGTPHDTG
                     SLHPLHQMHERGIQIFRRMGFALAEGPDIETEWYCFDALNTPPDHPARNEQDTFYLSD
                     GRLLRTHTSTVQIRAMESAPPPIRVIASGAAYRRDELDATHSPQFHQIEGLYVDENVS
                     VADLKGELEFFMRELFGSETEVQFRPHFFPFTEPSLEVYVRSKALKGGEQWIEVAGCG
                     MVHPAVFEAVNKARDDNAYDPEKWSGYAFGLGMDRLAMILFEIPDIRFFSQNDLRFLK
                     QFA"
     gene            7302..>9029
                     /gene="pheT"
                     /locus_tag="VIS53_03280"
     CDS             7302..>9029
                     /gene="pheT"
                     /locus_tag="VIS53_03280"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY5766841.1"
                     /translation="MKFSVNWLREYVDLPNNPEEIAELLTRAGIETKNIETRGANIDK
                     VIVSQITASSRHPNADRLTVCEADDGSGAKRQIVCGATNYKVGDKVPLALPGAKLANG
                     SEIRKSKLRGVESEGMLCSPIELGLGEDASGLLILSPDAKVGAPISDLFPADTILDVE
                     ITPNRGDLLSHFGLAREIAALTNKKIVGRFCETPRGLTQTPYSSRDDGVVTIAATSEC
                     PFFSLRKIDNVKVGPSPQWLRTKIESVGVRSINNIVDISNFVMLEFGQPTHAFDADKL
                     KGGINVRLGREGEKFLALDGNSYSLTPDNCVIADQERAVGIGGVMGGEETGVTDSTKN
                     ILLEAAYFLPGSIRRTARDLNLQSDASYRFERGVDPDMILRASQRAAELMGEIAGGTP
                     AKEIHVAGELPADPADVSLSHEKCSRVIGVAIDPKTIDEILARFGLRKTADATNSATW
                     KIPSYRRDLQRDVDLIEEVLRAYGIDKIPGRTRGRFMPTSAADRSHDVERLFLRDRLT
                     GSGLSEVRASKLISRNTMASNKAVELRNPLSEDHVALRPNLISGLLDVLERNIRAGAE
                     SVSIFEIGRA"
BASE COUNT         2113 a         2553 c         2464 g         1899 t
ORIGIN      
        1 gccagctgtt tagacgccgc gcagttgaaa gaagcgcgcg ttacacaagt ggtcaaagac
       61 gtgaagcttg gttcgcccca agcagcgcca cgccaagtca cagtcggtga aagccttcgc
      121 gacggtgatg ctatcaacac cggcgtgacc ggacgcagcg aattgacttt cgcggaccaa
      181 acgatcgcgc gtctcggagc gaaaacgaat gtcagtgtca gcgacggaac acgcaccata
      241 gatcttgccg aaggggcagt gctttttcag ataccgaaag gcgctggccg cttgaagatg
      301 aagaccgctg cgatcgcggt cgagagcaca ggcgccactg gcatagtcga gcgtcatggc
      361 cagttctacg tcaaggtgct tgtcctggaa ggaacagtcc gatgttattt gacgaatcgc
      421 ctcggcgaat cgctgttgct ccagccgggt caaattctca tcaccaagcc cgacgtcact
      481 gccctcccgg aaccggccga ttttgacatc gcgcgggaga tgaagacgtg cctgctggtc
      541 cgcgagtttc aacctctccc cagtcaaggg cggatcgaat cggaagaaca gaagcaactg
      601 aatctgatcg ccaagggcac ttacattccc tcgaatctcg tcattttggg acgcggcaca
      661 caggtcaccg ttgttaacgc gccatccaca acgccgtccc caaagccagt aacaaacact
      721 ggccagcagt ctcgcacacc ttaactcaca gatgccgaca tcgataccgc tgcttatgaa
      781 ctaaaaatcc cagcaagtat gaagaaaata ttcgcaggaa cccagtacac gaaatttatc
      841 gtagccgtgt cagccttaac ttggacgatc gccatcgccg attcggcaca cggagcgcaa
      901 ttgcaggaag cgcgcgtcac ccagatcgtg aatgacgtta aactgctgct cgaacaaggg
      961 gcgccgcggc cggccgtggt cagcgatctt gttcgccgtg gcaacgctgt tcgcaccggc
     1021 acgcagtcgc gcagcgaatt aaccttcgcc gacctaacca tcacccgcct cggcgccaac
     1081 acgattttca gtttcaagga aggcacgcgg gagatgaatc tcatcgatgg cgcgattctt
     1141 tttcaggtac ccaagggaag cggcggcgcg acaatcagaa cggttggagt caccgccgca
     1201 atcaccggca ctactggcat cggcgaattt catcccgcca ccgccaatag acctctaccc
     1261 gtcagcaagt ggctttgcct ggaagggaca ttccaccttt atctggccaa tggtcaatcg
     1321 ctagagctgg gtcccgggaa aatggtcacc actgacggca atagcttttc gaaagtcatg
     1381 acttttgata ttgcaaaatt agtaagcacc tcgctctttt tcaccggttt cgaccagccg
     1441 ctggcgagta tgaatttgat catgctcgaa tcacagaacc agatagccag cctttttgcc
     1501 atcagcacga cgaatccact cgatccggcg aggatcgtca acgtaaccag tcaggctatc
     1561 gtcgccgaag agacacaaac gccgccgtcg gtaacaccaa ctcccccaat aacaccaact
     1621 cccccagtaa caccgacacc gccacctcca actccgagta agttcgggac gccgtcggtg
     1681 atttcttcgc cagttcctta tctaattacg aatggaacgg tcattacaac cgatccctcg
     1741 ataaccagca atggcgtgac ggattacggg aaaatctatc gcggtcaggc tgatgacggt
     1801 gccttctcgc tttgggcttt cggttcgacc tcagctttcg atacggcgtt gcgcattgac
     1861 gatattttct ttgctgaccc gagccatctg tcgatcgccg tttttaaatt ccagagtcta
     1921 tcgctcaccg gcgatcctac tatcgatacc agcaacggcg cgacgaagct tgccctaatc
     1981 ggtgtggata gaattagctc cggcccaccg gggggctcgt tgacgttcac gggactggac
     2041 ctgctgctgc tggcgactgt taacggttca atcaacctaa cgtcggacgt gtcgttccaa
     2101 gatctcaaag agcttgtgat gtatgcgcgc ggggccggat ccgacctcac gattaattcc
     2161 ccgatttcca acatcgggat tctcgggctt gtcgcagaag actcgattcg cctcaccaat
     2221 cccggcacaa tgagcgtcgg caaactcgat gcgatcaccg gcggcgattt ggtgctgcaa
     2281 attggcgatt cgctcttact caacggcagg gtgagcttag acgtcatcgt tttgccgggc
     2341 gccagcgtcg ccaccggagt caatctcaca ctcaacgcca cgaacgattt catcaataat
     2401 tcggcgactc agttttctcg tttggctatt actaaccgcg atcacattgg tggcgacgcc
     2461 agtattgcgg ttcgtgccac gaatatttcc actgccaata acctcgatgt acaaatcgcc
     2521 aatcaagccg gtggccacat cggagagaac gcgctgatca atatccgtgc gtccaacgac
     2581 atcaacattg tgggcgacgc caccttccaa atcctgaata acgacagcgg ccatatcggc
     2641 ggtaacggta acatttctgt cacgactggt ggcgatggcg atctcacggc gaattccatt
     2701 tttgcctttg tcaataatcg aaacgccgga acgatcggca ctggcgctaa tattgacttc
     2761 gacatcggcg ctgctctcac cattcaggaa gatgcggttt ttggcatctc ggccaggaac
     2821 gacggcaccg acggagggac gataggttca cttgccaccg ttaacgtaaa tgcggccagt
     2881 gtttcgatcg gcggcttttt tcagactttt atcagtacga acggcggcgg acgaatccaa
     2941 ggagatgctg ttaactcggt aataacgagc ggcaacctga cggcccagca agggatcctg
     3001 gtgactatcg aagacacaat tttcggtggc actggcaact ttacgggtgg gcgaatcgag
     3061 ggggacgcaa aagtcagtct gaatgcacag aacattgcga ccccgtcgac taattcagga
     3121 actcccggaa cggatcttat ggctattgaa gcctccattt atccaaatgc tagcggcagg
     3181 gtcggcggta acgccatcgt agacgtatct gcctctcaga atatcagcgc gcccggcagc
     3241 gtcttgttct ggatagccaa tggtaattat ttggacttag gcggcggaac aattggagga
     3301 gatgcgagag tcaatgtgag cgctgccagc ctttccaccg gagatttgtt tgcccaaatc
     3361 ctgaactacg gcggtgcttc gattggcggc gatgccgcaa tcgatattac tgccgatacg
     3421 ctatcagttg gcggcgatct cgattccaag atcgataaca gcagtagcgg aacgatcggc
     3481 cggaacgcta ccatagacat gaacgtctcc ggcagcgcga ccgtcacgac cgatgccact
     3541 ttccagattc tgggcagcga cggtgcacag acggcggcca tcaatctcaa cggcggcaac
     3601 tataatgtcg gcggaacgtt cctttcatac atcgacggca acggaaggat cacattgaat
     3661 aatgccagcg ctcacgcgga cgtccttaaa gccggcgtgt ttggcgctaa cggcgtgctc
     3721 aatatcggcg gcggcacgct ctcggctgat acaacgctaa agctttacgc gccggggagt
     3781 aacggtcagc tcaatttcgt ttccaatgtc acgctcggcg gcaacagcgc taagattctg
     3841 gccgccaatt cggtgaccat ttttaacaac gtcgtggtca ccatcggcgg caaaaatccg
     3901 gcagatgttt acaccggctt caccggcgaa attccaaacg ctaattatac cggcttcggc
     3961 gggaatggct cgaccaccgg aacatttggc ggcgccggag ctaacaaccc gcaaccgatc
     4021 gaaaaagcgc cgccattcga cagcacaaat catgtgacgt cgtcaagcaa gcatggtggc
     4081 ggcgggagac tggccaacaa cacaatcaac gttagcagct cagatgagtt gctggcgctg
     4141 ctcgatcatg ctgctcccgg tcctggtggc aagatcactg ttccgccttc caagaagagg
     4201 aataatttga aaaattccag tcggatcgct gccgctggtc gtgcgaatgc cagtaatcgc
     4261 ttgaacgtaa atcgtcgcgc gatggacatg cgaaccgcgt cgtcatcggt gacgaaacat
     4321 tcgccgcagt gaaattcgcc cgctgcggcg agctacatcg cgtcggcaag gtcagacaac
     4381 aacggcgcca tggctaaatc gacgtgagta gcgcctccga gttcctctgc ccgcggtgca
     4441 agggaccgct gaaagacgtg cggacttccg gcggcgtttt ctacgggtgc gatgtctgcg
     4501 gcggtcgcgc cgtgacgatc gagttgctgc gcaaacgctt cacgccggaa tccatcaatc
     4561 cactgtggct gcacgcgatg cgaggcgaag gacgcgtcgg cctgccttgt gcctcgtgcc
     4621 agcagccgat gatcggcgtc gccctatccg accgagcgaa aattcacgtc gatgtctgcc
     4681 agcactgcca tttcatctgg ttcgacgctc acgaggttga cacgctcgtt ccgcgccagc
     4741 cggaaccggt cgctcccgaa ctgccgcaaa aagcgcgcga gatgctcgcg atcgctgaag
     4801 tcgagcgttt ggccgaacag gctgagggtc cggatcttga cagcgctgcg cccgatgaat
     4861 cgtggaaaca gatcgccgcg ttcctcggaa tgccggtcga gttcgatgca ccagaagagc
     4921 agcgaaaacc gtgggcgaca tggctgcttt cagctgccat catttgcgct agtctccttg
     4981 cgttttcaaa tctgcgcgag cttgttcaac gtttcggatt aattccagct gaggcggcac
     5041 gactcaatgg actcacgttc gtcacctctt tcttccttca cgcgggcatc attcaccttg
     5101 ccggaaacat gtatttcctg ctggcgtttg ggcatgccgt ggaaaatttt ctgcgaccac
     5161 tgcgttatct ggtgctcatt gcactggcag cattcatcgg tgacctggcg catatcgctc
     5221 ttgatcctcg ttcgcagaca ccttgcgtcg gcgccagcgg cggcattgca ggcgtcatta
     5281 cgttttacgc actgaatttt ccgcggatgc gactcgcttt tctgatgcgc tggggtttcg
     5341 tctggtttcg ctggattcga ttgcctgcct ggttcgtttt cgttctttgg attttgttcc
     5401 aaatcatcgg gcactcttga gcagagagca ggaatgagtt ccgtctcatc agccgcgcat
     5461 ttaggcggcg ccgcagtggg cgtcgtcgcg tggctggttt ggcgaaaacc caaagacgaa
     5521 acccgaatgc tcgaatgaca aaggcatccc gatccgaatg aaaagcggtt gtcattttgt
     5581 gttcagcatt tagtttcccg cccgcgatct ctccgcctgt cctgcgtctg tgggataaat
     5641 cagtgagcga ggccggaaag atcggtaacg gaacaacagc tcactgaacg aggagccccg
     5701 aaaacattcc cggggcaaaa caacaatgcc aagagctacc aatgccccgg cgagccgtgc
     5761 gcgccggaaa cgaatgctga aaaaggcgaa aggctaccgc ggccgccgct caaaactttt
     5821 tcgttatgcc aaagacgcgg tcatgaaggc gcagtattgg gcctatcgcg atcgtaagac
     5881 tcgcaagcgc acatttcgtt atctttggat ccaacgtctc aacgccgccg cacgcgcgaa
     5941 cggcatgact tacagccgcc tcgccgaagg actgaaagct gccggtattg gactggaccg
     6001 caaaattctc gccgatctcg cagtcaccga cgaagccgca ttcaaatcga ttattgatca
     6061 agcgaagcgc gcgctggaag acaaagcgaa atcgaaaaag aaggcggcgt gattcgtgaa
     6121 tcgagattgg tgaatcgaga ttcgatttcc cgatttaacg acgtaacggt ttaacgaatc
     6181 acgaaatcca tgcacccgct ggaacaactg cgcgatgacg cgctgcgcga gattgaagct
     6241 gcgcgcgacg agaaatcgct cgaaggcgtc cgcgtaaaat atctcggaaa aagcggcagc
     6301 atctccgaat ggggcgagcg gatgaaaacg ctcggcaaag aagaacgccc ggtcgtcggt
     6361 aagctgctca accaggcgcg caacgccgtt agcgcagcgc ttgaccaacg cggaggtaaa
     6421 ggccgtgctg aaaaagaatc cgacgcgctc gcgaggatcg acatttcgct cccgggaacg
     6481 ccacatgaca ctggttctct gcacccgctt catcagatgc acgaacgcgg aattcagatt
     6541 ttcagacgaa tgggctttgc gctcgccgaa ggtccggata tcgaaacgga gtggtactgc
     6601 ttcgatgctc tgaatacgcc gcctgaccac cctgctcgca acgaacagga cacgttttat
     6661 ttgtccgatg ggcgactcct gcgaacccac acttccacgg tgcagatccg cgccatggaa
     6721 tcggcgcccc cgccgatccg cgtgattgcc tcaggcgcgg cgtatcgacg cgacgaactc
     6781 gacgcaaccc acagcccaca gtttcatcag atcgaaggat tgtatgtcga tgaaaacgtc
     6841 agcgtcgccg atttaaaagg cgagctcgaa ttcttcatgc gggaactctt tggctccgaa
     6901 accgaagtgc aatttcggcc gcatttcttc cccttcaccg agccaagctt ggaggtttac
     6961 gtccgatcaa aagctctgaa aggcggcgag cagtggatcg aagtagccgg ttgcggcatg
     7021 gtgcatccgg ccgtttttga agcggtcaat aaagcgcgtg acgataacgc ttacgatccc
     7081 gaaaagtgga gcggctatgc attcgggctc gggatggatc ggctggcgat gattctattc
     7141 gaaattcctg atatccggtt cttctcgcag aatgacctgc ggtttttgaa acagttcgcg
     7201 tgaacccatt ctgtcattcc gaggtagggg cggttcaccg aaccgcccgc gggcgattga
     7261 ggtcaatcgc ccctaccctt tcgacatgac atgacgtcgc catgaaattc tccgtcaatt
     7321 ggctgcgcga atatgtcgat cttccaaaca atccggaaga gatcgccgaa ttgctgactc
     7381 gcgccggcat tgaaaccaaa aacatcgaaa cgcgcggcgc caacatcgac aaggtgatcg
     7441 tttcgcaaat caccgcgtcc tcgcgtcatc cgaatgcaga tcgactcacc gtatgcgagg
     7501 cagacgacgg gagcggcgcg aaacgccaga tcgtatgcgg cgcgacaaat tacaaagtcg
     7561 gcgacaaagt ccctctcgcg cttcctggcg ctaagctggc aaacggttcg gagatccgaa
     7621 aaagtaaact gcgcggcgtc gagtcggaag gaatgctttg cagcccgatc gagctcggtc
     7681 tcggcgaaga tgcgtccggc ctgttgattt tgtcgcccga tgcaaaagtt ggtgcgccga
     7741 tctctgatct tttcccagcg gacacgattc tggacgttga gatcacgccg aaccgaggcg
     7801 atttgctcag ccatttcgga ctggcccgtg aaatcgcggc gttaacgaac aagaaaattg
     7861 tagggcgttt ctgtgaaacg ccaaggggtc tgacacagac gccctacagt tctcgggatg
     7921 acggcgtagt aaccatcgcg gcaaccagcg aatgtccatt cttctcgttg cgcaagatcg
     7981 acaacgtaaa agtgggtccc agcccccagt ggttgcgcac gaaaattgag agcgtcggcg
     8041 ttcgctcaat caacaacatc gtcgacatct cgaattttgt gatgctggag tttggccaac
     8101 cgacacacgc tttcgatgcc gataaattga agggcggcat caatgtgcgg cttgggcgcg
     8161 agggcgagaa atttctcgcg ctcgatggaa atagttactc gctcacgccc gacaattgcg
     8221 ttatcgctga tcaggaacgc gcggttggaa tcggcggcgt gatgggcggc gaagaaacgg
     8281 gtgtgaccga ttcgacgaaa aatattttac tcgaggccgc ttattttctg ccgggaagta
     8341 ttcgccgaac ggcgcgcgat ttgaatctac aaagcgatgc aagctaccga ttcgagcgcg
     8401 gcgtggatcc cgacatgatt ttgcgagcgt cgcaacgcgc agccgaattg atgggcgaga
     8461 tcgctggtgg aacgccagcg aaagaaattc atgttgccgg tgaacttcca gccgatccag
     8521 ctgacgtctc gttgagccac gaaaaatgtt cccgtgtaat cggcgtcgca attgacccga
     8581 aaaccattga cgaaattctc gcgcgtttcg ggcttcggaa aactgcggat gcgaccaatt
     8641 ccgcaacctg gaagattccg agttaccgcc gcgatttgca gcgcgacgtc gatctgatcg
     8701 aagaagtcct ccgcgcgtac ggaatagaca agattccggg aaggacgcgc ggacgcttca
     8761 tgccaaccag cgcggccgac cgttcacacg atgtcgaaag actttttctc cgagaccgat
     8821 tgaccgggtc cgggttgtca gaagttcggg catcaaaatt gatttcgagg aacaccatgg
     8881 cttccaacaa agcggtcgag ctacgcaatc cgctaagcga agatcacgtc gcgctgcggc
     8941 caaacttgat cagcggtttg ctcgacgtgc tggaacgaaa cattcgtgcc ggagccgaga
     9001 gcgtttccat cttcgagatc ggtcgtgca
//
LOCUS       DATDAJ010000141         5433 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_866095, whole genome shotgun sequence.
ACCESSION   DATDAJ010000141 DATDAJ010000000
VERSION     DATDAJ010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5433
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866095"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VIS53_03285"
     CDS             complement(<1..818)
                     /locus_tag="VIS53_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY5766842.1"
                     /translation="MTTRFRFGILALVWLVTANHNDAGPTPVDAPRSESDAVNISEHR
                     NRLAHEKSPYLLQHAHNPVDWYPWGEEAFRKARQENKPIFLSVGYSTCHWCHVMAHES
                     FESEEVAAVMNREFVNIKVDREERPDVDRVYMTFVQATTGSGGWPMSVWLTPDLKPFV
                     GGTYFPPEERYGQPAFTKVLERIATAWKEDHDKIVEQGSKIVEALRESQSATPGEGKI
                     DGSVADAAYRQIDRSYDPKEGGFGTAPKFPRPVTLNFLTRFYARDSKGDAGKHAL"
     gene            947..1684
                     /locus_tag="VIS53_03290"
     CDS             947..1684
                     /locus_tag="VIS53_03290"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY5766843.1"
                     /translation="MDTTHITLLFLAIGVVALLYSSVGHAGASGYIATMTLFGIAPIV
                     IRPTALVLNILVASIGTFQFWRAGYFSWKLFWPFALLSIPAAYLGGYLQPSASILRIL
                     IGVVLLFSAVRLVVRRSDPPQTFPPSQPVAISVGGALGFLAGLTGTGGGIFITPVLLF
                     CRWAHIRQAAAVSALFILVNSIAGLVGYFTKVRTIPLLGFILAAAAIIGGIIGSHLGS
                     RRFAVRVISLCLATVLIIAGIKLIFTR"
     gene            complement(1697..2194)
                     /locus_tag="VIS53_03295"
     CDS             complement(1697..2194)
                     /locus_tag="VIS53_03295"
                     /inference="COORDINATES: protein motif:HMM:NF015690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HEY5766844.1"
                     /translation="MNKRERISQWVAEATGEEVNPHQADVEKHSYYRAFFHCWNEQRY
                     YEAHDVLEQLWLNTKSSDADFFKGLIQAAGAFVHLQKHFEHPSHAKHGRRLPPAVRLF
                     RLAEKNLESFAPCHHALDVAALCQLLSRYADEIVLSDYTINPWSPETAPKLEVGAVHP
                     NRPGD"
     gene            2333..3598
                     /locus_tag="VIS53_03300"
     CDS             2333..3598
                     /locus_tag="VIS53_03300"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HEY5766845.1"
                     /translation="MSGPTLAIVLGAIAILIFCSALFSRVETALSLLKPHQLRRLEEN
                     HAGLTNFIQLFRENPRRVLNVLLLGDGLVNVLLVILCLFFLWEGPLAGRIPQWLAGIL
                     IFAIVVLICDLVPKLVTLAAPSKLSAIGAFTLQIAMPFLDRIGRGLESVSDYIIDCFT
                     PAHLRSRQRLSDEELGTLLQIGEEEGTLYQGEAEMIQEIIKLGDRTAKDCMTPRVDSF
                     MLPDDLTNEEAIAQLKEKRHRRVPVYADTPDQILGIIDVKLFLLDSSEHYTEKLIAPS
                     FIPETMRALELLKLFLTHPQGMGVVVDEFGGIEGIITMDDIVEEILSGTAPRDGSEFY
                     IEPLGNGKFLVSGDARLDDLTEHLGFQIEAEGIDTIGGFIFTRLGYVPSSGTKLEIPG
                     LAITVRHAGRKRIEEVLLEKTTNAFEEAA"
     gene            3595..4554
                     /locus_tag="VIS53_03305"
     CDS             3595..4554
                     /locus_tag="VIS53_03305"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HEY5766846.1"
                     /translation="MTVAIISIICCWIISFFFNGIESGLLSIDPVRLRQNVKRRVPAA
                     LQLNRLLKYPERLLATVLLITNAADIVALLLLTSQLVRWYGYAGFLLALVIALPVYLF
                     VLSVLPKSLFRRFPFRALARLAGVLQFTSILFSPLLEFGARLGKLLLPGHAGKRGRLF
                     AVREELKQITTESELEGSLTATERAMIHSVVDFRGSKVRDVMLPAAKVAALHSGASTQ
                     EALELSASTGLDRLPVLAPNGQPAGLVNVPDILLEPDGNKPLGEYVRRIVMTTDDEPA
                     YRVLQQLRGARLGLAAVVDRKDNFRGIVAIEDLVRRLVSTDNV"
     gene            complement(4834..>5433)
                     /locus_tag="VIS53_03310"
     CDS             complement(4834..>5433)
                     /locus_tag="VIS53_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEY5766847.1"
                     /translation="HSKMMAWLAFDRAIKLVEDCECAANEHFDRWQKIREQIHAEVCE
                     RGYNPKKKAFTQVYGDDALDASLLTMPLTGFLPVTDKRVRGTIEAIERELMEDGFVLR
                     YRPQETGVDGLPGDEGVFLPCSFWLADCWHLLGRKKEARELFERLLDVRNDLGLLAEE
                     YDPRAKRQLGNFPQAFSHVALVSCARILGDEDRFLARGD"
BASE COUNT         1092 a         1534 c         1475 g         1332 t
ORIGIN      
        1 agcgcgtgtt taccggcatc gcctttggaa tcgcgtgcgt agaatcgcgt gagaaaattg
       61 agcgtgaccg gtcgcggaaa tttcggcgcc gtaccgaatc cgccttcctt cgggtcataa
      121 ctgcgatcaa tttgacgata ggcagcatct gcaactgagc cgtcgatttt cccttcaccc
      181 ggtgtggctg attgagactc gcggagcgcc tcaacgatct tactcccctg ctccacaatt
      241 ttatcgtgat cttccttcca ggctgttgcg atccgctcga gcacttttgt gaaagctggc
      301 tgaccatatc gttcctccgg cggaaaatac gttccgccaa caaacggctt cagatccggc
      361 gtcaaccaaa cactcatcgg ccagccgcca ctgcccgtcg ttgcttgaac aaaggtcatg
      421 taaacgcggt caacgtcggg gcgttcttcc cggtcgacct tgatgttcac gaactcgcga
      481 ttcatgaccg cggccacttc ttcactttcg aatgattcat gggccatgac atggcaccag
      541 tggcaggtgg aatagccgac tgagagaaag atcggcttgt tctcctggcg cgccttacga
      601 aacgcttctt cgccccacgg ataccagtcc accggattgt gagcgtgctg gagaagatat
      661 ggcgacttct catgtgctaa acggttcctg tgttcgctta tgtttacagc gtcgctttct
      721 gagcgagggg catccaccgg tgtcgggcca gcatcgttat gatttgctgt caccaaccaa
      781 actaacgcca gaatgccaaa gcggaagcga gttgtcatgc tgcgccacct tgaatcctcg
      841 aacgattaaa ccgcaaatcc gatgtaacga tgctacgatg taacgaatca cgctcttttg
      901 tcattcgtca ttgattcgtc attggtaatt cgtcattcgt catttggtgg acacgactca
      961 tatcacgctt cttttcctcg ccatcggggt agtcgcgtta ctttactcct ccgtcggtca
     1021 tgccggtgcg tcaggttata tcgcaacgat gacgttgttt ggaatcgcgc ccattgtcat
     1081 tcgtccaacc gcgctcgtgc ttaatatttt ggtagcgtcc atcggcacgt tccagttttg
     1141 gcgcgctggg tatttctcgt ggaagttgtt ttggccgttc gcgctgctgt ccattccggc
     1201 agcatatctc ggtggttatt tgcagccgtc tgcttcaatt ctgaggattc tcattggggt
     1261 cgtgctgctt ttttcggcag tgcgacttgt ggttcgccgt agcgatccgc cgcaaacatt
     1321 tcctccgtcg caaccggtcg cgataagcgt gggtggagcg ctcggattcc tcgcaggact
     1381 aaccggaact ggaggcggaa tttttatcac gccggtcctg cttttttgtc gctgggctca
     1441 cattcgacaa gccgccgctg tctcagcgct attcatcttg gtgaactcga tcgccgggct
     1501 ggttggctac ttcacaaaag tccgcaccat tcctttgctc ggattcattc tcgcagcggc
     1561 agcaattatc ggcggcatta ttggctcgca tctcgggagc aggcgttttg ccgtccgcgt
     1621 aatttccctt tgtctggcca cagtgctgat cattgcggga atcaaattga tcttcacgcg
     1681 gtaggggcga ctgacctcaa tcgcctgggc ggttcgggtg aaccgccccc acctccagct
     1741 tcggcgccgt ttccggtgac caaggattga ttgtgtaatc cgacaacacg atctcatcgg
     1801 cgtaccggct caaaagctgg caaagcgctg caacgtccag cgcgtgatgg cacggcgcga
     1861 agctctctag atttttttcg gcgagccgga acaggcgaac ggcgggcggc aaacgcctgc
     1921 cgtgcttcgc gtgcgacgga tgttcgaagt gcttttgcag atgaacgaac gcgccggccg
     1981 cctggatcaa ccccttgaag aagtctgcat cagacgattt ggtgttgagc caaagctgtt
     2041 ccagcacatc gtgcgcttca tagtacctct gttcgttcca gcaatgaaaa aacgcgcggt
     2101 aatacgagtg tttttccacg tctgcctggt gcgggttcac ctcttccccg gtcgcttcgg
     2161 ccacccactg tgaaatcctc tcgcgtttgt tcatagggag cgttaacttg cttgcggctc
     2221 agaggatgag caaaccacga accaccaact cttcggaggg acctcgtccg tcctccccta
     2281 tccttcgtgc cggaaaggcc aggcagggcg cgccggtgtt ggtgccgcaa aaatgagtgg
     2341 ccctactctg gccattgtac tcggggccat cgctattctg atcttctgct ccgcgctgtt
     2401 ttccagagtg gagacagcgc tctctctgct gaagccgcat cagttgcgcc gcctcgaaga
     2461 gaatcatgcg ggcctgacga attttataca gctcttccgc gaaaatccgc gccgcgtttt
     2521 gaatgtgctg ctgctgggag acggattagt caacgtgctt ctggtcatat tgtgtctttt
     2581 ctttctgtgg gaaggccccc tcgcaggacg cattccgcaa tggctggccg gtatcctgat
     2641 cttcgcgata gtcgtgttga tttgtgactt ggtgccgaaa ctggtgacgc tcgcggcgcc
     2701 gtcgaagctt tcggcgatcg gcgctttcac cttgcaaatc gcgatgccat ttctcgatcg
     2761 catcggccgc ggactcgagt cggtaagcga ttatataatc gattgtttca cgccagcgca
     2821 cttgcgtagt cgacagcgct taagcgacga ggaactggga acgctgcttc aaatcggtga
     2881 agaggaaggc acgttgtacc aaggcgaagc cgagatgatc caggaaatca tcaagctagg
     2941 cgatagaacg gcgaaggatt gcatgacgcc gcgcgtggac agtttcatgc tgccggatga
     3001 tttaaccaac gaggaagcaa tcgcgcaact aaaggagaaa cgacatcggc gcgtccccgt
     3061 ttatgccgat acgcctgatc aaatcctcgg catcatcgac gtaaaacttt tcctgctcga
     3121 ttcgtcggag cattacactg agaaactgat cgcgccgtcg tttatcccgg agacgatgcg
     3181 cgcgctggag ttgctcaagc tttttctgac gcatccccag gggatgggcg tggtggttga
     3241 cgaattcggc ggcattgaag gaatcatcac catggacgat atcgtcgagg aaattctcag
     3301 tggcaccgcg ccgcgcgatg gttcggagtt ttacatcgag ccgctcggca atggcaaatt
     3361 tctcgtgagt ggcgacgcgc gtctggacga tttgaccgaa catcttggct ttcaaattga
     3421 ggcggaggga atcgacacca tcggcggatt tatttttacc cgccttggtt atgtgccgtc
     3481 ttccggaacg aaactcgaga tcccaggcct tgcgatcact gtccgtcatg ccgggcgcaa
     3541 gagaatcgaa gaagtcctgc tggagaaaac cacaaacgca ttcgaggagg cggcatgacg
     3601 gtcgcgatca tcagcattat ttgttgctgg atcatttcgt ttttcttcaa cggaatcgaa
     3661 agcggcctgc tgtcgatcga tccggtacga ttgcggcaaa atgtgaagcg gcgcgtgcca
     3721 gcagctttgc agttgaatcg cttgctcaaa taccccgaac ggttattggc gaccgttctg
     3781 ctcatcacaa atgcagcgga catcgtcgct ctgctattgc tgacaagcca gctggttcgg
     3841 tggtacggct atgccgggtt cttgctcgcc ctggtcattg cgcttccggt ttatctgttt
     3901 gtgttgtcgg ttctccctaa gtcgttgttc cgacgctttc cttttcgcgc gctggcgcgg
     3961 cttgccggcg tcctccaatt cacgtcgatt ttgttttcgc cgctcctcga attcggcgcg
     4021 cgtctaggca agctactcct gccaggccat gccgggaaac ggggccgtct tttcgctgtg
     4081 cgcgaggaat tgaaacagat cacaacggaa agcgagcttg agggctctct tactgcaacc
     4141 gagcgtgcga tgattcacag cgtcgtcgac tttcgtggtt cgaaagtccg cgacgtcatg
     4201 ttgcccgcgg cgaaagttgc cgcgctacac tccggcgctt caacacagga agcgctcgag
     4261 cttagcgctt ctaccggtct tgatcgtttg cccgtgcttg cgcccaacgg tcaaccggcc
     4321 ggcttggtga atgtaccgga catcctgctc gaaccagacg gaaacaaacc gctaggcgaa
     4381 tatgtacggc gtattgtaat gaccacggac gatgagcccg cctatcgtgt cctgcagcaa
     4441 ctgcgtggtg cgcggctcgg tctggcagct gtcgttgatc gaaaggacaa ctttcgcggg
     4501 attgttgcca tcgaggactt agttcgccgt ctcgtttcca cagacaacgt ttagcgcaag
     4561 gccgcgattt tcatcgtgtc atttgcgcat gtaaaagctg agcgccaaag gcgcggcaat
     4621 cacctgaagc ctggggcaac gccccaggat catggaattt agaaagcctc agcgctgaaa
     4681 gcgcgaatca gtttgcgagt tgcattgaag tgattgaatc gcgctttcag cgctggccga
     4741 tcccgaacaa tcgagttcct ggggcgatgc cccaggctcg agctgacgtg cgcctttggc
     4801 gcttaggtgc aatcctccag atgcgctgcc acctcaatca ccgcgagcga ggaacctgtc
     4861 ttcatcgccg agaattcgag cgcaacttac caacgcgacg tgcgagaacg cctgaggaaa
     4921 atttcccagc tgacgctttg cgcgcggatc gtactcttcc gcaagcagtc caagatcgtt
     4981 gcgtacatcg agcaacctct cgaacagttc gcgtgcttct ttcttgcggc cgagcagatg
     5041 ccagcaatcc gccagccaaa acgagcacgg aagaaatact ccttcgtcgc ctggcaaccc
     5101 atccacgccc gtttcctgtg gccgataacg taggacgaaa ccatcctcca ttagttcacg
     5161 ttcaattgcc tcaatcgtgc cgcgaacacg tttgtcggtg acaggcagaa aaccggtgag
     5221 cggcattgta agcaggctcg cgtccaacgc gtcgtcccca taaacctgag tgaaagcttt
     5281 cttcttcggg ttatagccgc gctcgcaaac ttcggcatgg atttgttctc gaattttttg
     5341 ccaccgatca aaatgctcgt tagccgcgca ctcgcagtcc tcgaccagtt tgatcgcgcg
     5401 gtcgaacgcc aaccacgcca tcattttcga gtg
//
LOCUS       DATDAJ010000142         6814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_868557, whole genome shotgun sequence.
ACCESSION   DATDAJ010000142 DATDAJ010000000
VERSION     DATDAJ010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6814
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_868557"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..749
                     /locus_tag="VIS53_03315"
     CDS             <1..749
                     /locus_tag="VIS53_03315"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5766848.1"
                     /translation="WTSLSATDETVRGPGIFATTHWSVVLEAQGESPAAQNALEKLCR
                     TYWRPIYGYVRRHGAGAEDAEDLTQGFFALLLERKDLNSVRKEKGRLRSYLLASVKHF
                     LADESRHAMALKRGKGQRLIPFDDIQEGERIESERSDRLTADQIYERRWAFTVLEQVM
                     ARLREDYRSAGNVRFFDQMKKMLMDEPDRPSQAQIAIEFGMTENAVKQAFYRFRQRYQ
                     TLLREEIAHTVAMPGDVEDELRYLIGVVRT"
     gene            855..2627
                     /locus_tag="VIS53_03320"
     CDS             855..2627
                     /locus_tag="VIS53_03320"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766849.1"
                     /translation="MDRTKAAIIALIIVLVALAVAIGWTLCKGKQPSEKVGITKGVAV
                     LPFEELSPDPDNAYFADGIHEEILARLATIHDLKVISRNSTRQYHHKPPNLRGIAREL
                     GVSNIIEGTVRREADQVRVNVQLISAQTNSYIWVDTYNRKLTDITAVESEIAKGIAES
                     LQVKLTAREAQALAVKPTNNPEAYDAYLRGLVFDARTAYSNDAQRNAITSYERAVQLD
                     PGFALAWARLSRADAALYFIRADQTAARRDVARRALENAQELNPNLPETQLALGYYQY
                     WVLRDYGLAKDTFEHLREMLPGSSDILYALGLVTRRQGKWDETIAYLERCLALDPRNV
                     EVLSNTAWTYAMLRKFSAALKLYDRALGITPNDLDLLAAKAGTYQADGNLKQAARLLT
                     EINTQSPIQAFITKMTQLRLERNHGEAVRLLQGRQAHFQFASQIDQATNQVILAFAQR
                     LAGDAAAAKATAEQASNKLKQLCRDQPDNSFFAQQLALANAALGEKEAALSEGERATT
                     LLPRAGDPLSGPTREEVLALIQMMFGDSARSISTLSRLLQTPYISWLYGPMPATPALL
                     RLDPIWDPLRGDPAFQKLCEENQK"
     gene            3419..3898
                     /locus_tag="VIS53_03325"
     CDS             3419..3898
                     /locus_tag="VIS53_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766850.1"
                     /translation="MKTKIINKLLLSLGLMFVLGSAITQVRGDRQAIPTPEQLPVVTI
                     HSTGDVKRGKTGSFVLDMRRPTSSEQGYNPYHPYVNFSVSGTAIAGVDYVVLVSPAQI
                     GPEGYGVILVKTLPDPRGSFSRKAYSVVVTLQPGLGYALAPFAATGGGTSAKITIMP"
     gene            4558..4935
                     /locus_tag="VIS53_03330"
     CDS             4558..4935
                     /locus_tag="VIS53_03330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766851.1"
                     /translation="MPDNILPIASINFAPVGLALGQTARLNLVNMDVANGITVSCRFI
                     DAGGATLAESVITLSLGKIASVDFQRGDPLPGESPEQLRAEVRVQLDIFTYGISSDSL
                     RRSLEVFNNNTGATTVYMGGGGS"
     gene            complement(5303..6724)
                     /locus_tag="VIS53_03335"
     CDS             complement(5303..6724)
                     /locus_tag="VIS53_03335"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5766852.1"
                     /translation="MAAQRKPNLILFLPDQQRADTLACYGGVKVHAPNLNKLASESVI
                     FERAYVTHPVCTPSRSSLMTGTWPHINGCTHNSVPLGRRFRVFPELMPDRDYRTAYIG
                     KWHLGEDGPAGRGFQHCISTDGDGDYSNFLISKSITPDKANGRFSEVAISNLPIELSR
                     PKFLEKHACDFIEKSQRDPFILVVAFVEPHSPYNGPLNNVNPLDDVTLDAPATIPESE
                     DIPLRYRLMREWQQAEALLDRERLPMQLFFGITPDEYRSIKQRYLGLVTLVDQSIGAI
                     LSCLERCGLTEHTIVMHTSDHGDGLGVHHLFGKETMFEEATRVPWLIRLPGQTRQKLI
                     SNPVSHIDFVPTLLDLLGESNHPQCAGKSLLPLINDAIASPNNVFLEWAPNRTKVKKG
                     SKLARRRMIKRAVEESTRTLVSPDGWKLCLRDKDLNELYNLNEDPFETRNLYSDAQYA
                     AVVSRFTTEIYRWQDATNDKLKL"
BASE COUNT         1622 a         1891 c         1830 g         1471 t
ORIGIN      
        1 cgtggacgtc actgagcgcg accgacgaga cggtccgcgg tcccgggatc tttgctacca
       61 cgcactggag cgtggtgctc gaggcacagg gtgaatcgcc ggccgcacag aacgctctcg
      121 aaaaactttg ccgcacgtat tggcggccga tctatggtta cgtgcggcgg catggcgccg
      181 gcgctgagga tgccgaagat cttacccagg gctttttcgc attgttgctc gagcgcaaag
      241 atctgaacag tgtgcgcaag gaaaaaggac gacttcgttc gtacctgctt gcctcagtga
      301 aacattttct cgctgacgag tcgcgtcatg ccatggcgct caaacgtggt aaaggacaac
      361 gcttaattcc gttcgacgac attcaagagg gcgagcgcat cgagtcggaa cgcagcgatc
      421 ggctcaccgc cgatcaaatc tacgaacggc gttgggcgtt cacggtattg gagcaagtga
      481 tggcgcgact gcgcgaagac tatcgcagcg ctgggaatgt gcgcttcttt gatcagatga
      541 agaaaatgct catggacgaa ccggaccgtc cgtcgcaagc ccagatcgcg attgaattcg
      601 gcatgaccga gaacgcggtc aaacaagcct tctatcgatt tcgtcagcgt taccaaacat
      661 tattgcgcga ggagatcgcc cacaccgtcg ctatgcccgg cgacgtcgaa gacgaattgc
      721 gctatctaat cggtgtagtt cggacgtagt gtctgaaaag aatttgacgc ggtaagagag
      781 agggcgcgct cgcgcctgcc ggacatacga acggtactta ggctttgctc acttgtcaca
      841 aatgcgtctc gcaaatggat cgaacgaagg cagccattat tgcgctcata atagtgctgg
      901 ttgccttggc ggtagcgatt ggttggacgc tttgcaaagg taagcaaccg tccgagaagg
      961 tcggcataac aaagggagtc gcagtacttc ctttcgaaga gctcagcccc gatccagata
     1021 acgcctactt cgcagacggt atacacgagg agatcctggc acggttagca acaatccatg
     1081 atttgaaagt catttcgcgc aattccacgc ggcaatatca ccacaaacca ccgaaccttc
     1141 gtggtatcgc gagagaactt ggcgtatcga acataatcga agggacagtg agaagagaag
     1201 ctgatcaggt gcgagtcaac gtgcaattga tcagcgcgca gaccaattcc tacatctggg
     1261 tagacacgta taaccgtaag ctgactgaca tcaccgctgt tgagagcgag atcgcgaaag
     1321 gaatcgccga gtcgttgcaa gtaaagctga ccgcgcgcga agcgcaggcc ctagccgtca
     1381 aaccgacaaa caatcccgaa gcctacgacg cgtatctgcg cggcctggtg tttgacgcac
     1441 gcaccgctta ctcgaacgac gcgcaaagga acgccatcac ttcttatgaa cgggcggtgc
     1501 aacttgatcc agggtttgcg ctggcctggg cgcgactttc ccgcgcggac gcggcgcttt
     1561 acttcattcg cgcggatcaa accgcggctc gacgcgacgt tgcgagacga gctttggaaa
     1621 atgcgcaaga attgaatcct aatctgcccg agacgcagct cgctcttggg tattatcaat
     1681 actgggtact gcgtgattac ggcctcgcca aagacacatt cgaacatctt cgcgagatgt
     1741 tgccaggcag cagcgacata ctctatgccc ttggcttggt tacccggcgg caaggaaagt
     1801 gggatgaaac cattgcatac cttgagcgat gtctcgctct cgatccacgc aacgtggaag
     1861 tccttagcaa tactgcatgg acttacgcca tgctgcgaaa gttctcagcc gcgctaaagc
     1921 tctacgatcg agccttggga attactccaa acgatctcga cctcctcgct gcaaaagccg
     1981 ggacttatca ggcagacggc aatctaaaac aagccgcgag gctcttaacg gaaatcaaca
     2041 cgcagagccc aattcaagct ttcattacga agatgactca actgagactc gaacgtaatc
     2101 acggtgaggc cgttcgattg ctgcaaggcc gacaagcgca ttttcagttt gcttctcaaa
     2161 tcgatcaagc tacgaatcaa gtgatactgg cttttgctca acggcttgcc ggtgacgccg
     2221 cagcggcaaa agcaaccgct gaacaggcga gcaacaagct gaagcagctc tgccgtgatc
     2281 aacccgataa ctcctttttt gcgcaacaac tggcgcttgc gaacgccgca ctaggggaaa
     2341 aggaggcagc gttaagtgaa ggggaacgcg ccaccacgct tttgccgagg gccggagatc
     2401 cactatccgg tcctacccgt gaagaggtac tggcgctgat tcagatgatg ttcggtgaca
     2461 gcgcccgctc gatctcaacc ctaagccggc tgttacaaac gccgtacatt agttggcttt
     2521 acggccccat gccagccacg ccggctcttc ttagacttga tccgatctgg gatcctttac
     2581 gcggtgaccc cgcctttcaa aagctctgcg aggaaaatca aaaataattt caccgcggat
     2641 cacacggata taggatcatt tagaaaaatc cggcagagcg agacgcgctg ttgcaaatcc
     2701 gatgagaatt gtagggcgtc tgtgtcagac gccaaccgaa atccaagtcg ccgcgccgac
     2761 cgctctccaa tccgtaacat ccgcataatc cgtggttcgg aagtcttctg gatttttccg
     2821 cgtaacctcg cgccaaattt tacgcattac gggggtgaac acagaaagga aggatcgaac
     2881 ctatgaacca tcaagatagc ggaacgataa ttataacttt tctacttctt cttccctggc
     2941 ttgggcgcgc tgccgtatcg gctgtggcga tatggcgaga ccgcatcgaa acagaaggca
     3001 ggaaaacaaa acaaaacttc tgacctcaac ttgcgtgccg tatgggttcc tgcggatgcc
     3061 gtaagcgaac ccgccattct tctagatctc aatcaggccg gacaccctgc agttgctggg
     3121 tgcctggcct tttggcgccc gccgacagaa gagtgcaacc acgggtgctt cgatcccttt
     3181 caatcaattg gtcggcggta acaacaccgc gcctggctgg cacattcgtc gtgttcaaca
     3241 caacgactca gcgagtgttg gctggctcat ccgcgatagt tgtgtgatcc gcggttctcc
     3301 gacgttttct acgtaacctc gcgccggctt ttacgcatta cctcagtgaa cggctggaaa
     3361 tgagttctca atgacgagag ttcattgaaa gccaaaacaa gaaagaaaaa taaataatat
     3421 gaaaacaaaa atcatcaaca aactccttct tagtctcggc ttgatgttcg tgcttgggag
     3481 cgcgatcact caggtgcgcg gcgatcgcca ggcgattccg actcctgaac aactcccggt
     3541 tgttacgatt catagcaccg gcgatgtcaa gcgcgggaaa accggttcat tcgtccttga
     3601 catgagacgg cccacatcca gtgagcaggg ttacaacccg taccacccat acgtaaactt
     3661 ctctgttagc ggcaccgcta tcgcaggagt tgattacgtt gtgcttgtct ccccggccca
     3721 gatcggcccc gaaggctacg gagtaatcct ggtcaaaacc ttgcccgatc ccagaggatc
     3781 attctcccgc aaagcgtaca gcgttgtggt aacgctccaa cctggattgg gatacgcact
     3841 agctcctttc gcagctacag gcggaggcac gtcagccaaa atcaccatta tgccgtaact
     3901 catgagtcat cggcaggcgg aaggaatgga gcgccgcgct gtcccggaag tattctgggc
     3961 ggcgcggcgc cgctgcgttg gtgcgcggcg ttccggttca tcgttgcacg ccttcaccga
     4021 agtttggaag tattgaacaa cgaggccaat gcgaacaccg tgttcatcgg cgggtagcct
     4081 cgtaacaatt gactgactcg gtgacttagc gactacgcaa gtaaacaccg cttgcaatca
     4141 accgtcacct tccgccggta tggcggttct tcgtttgtaa taacaaacga taagccgact
     4201 tctatccggc ctacggaatt cctgattcca acctcttctg catttccacg taacctcacg
     4261 cccgccttta cgcactacct ctgtgaaagg ccggaaatga gttctcaatg acgagaggtc
     4321 agggaaggcc aaacaaagaa agaaagaaat cacatgaaaa atcgaaacaa tgtattcata
     4381 accatagtct ctgcgcttgc gtttgcgctt gcgccaatcg tccaagcggc cccgtcgcct
     4441 gacggtggtc ccactcgggg gcaggctaac gcgggtccga cgcccgacgg tggtcctacc
     4501 cacgtgtttt ccagaacgcc caggaatgcg actagtgagg ctggagctaa gtccgccatg
     4561 ccggataaca tcctccccat tgccagcatt aacttcgctc cggtcggctt ggccttaggt
     4621 cagacggcgc ggctcaacct cgttaacatg gacgtagcaa atggtatcac ggttagttgc
     4681 cgtttcatcg acgcgggtgg cgctacgctt gccgaatccg taattacact gtcattaggc
     4741 aagatcgcct cggtcgattt ccagcgcgga gatccgctgc caggcgagtc tcccgaacag
     4801 cttcgagccg aggtgcgagt ccaactggac atcttcacgt atggaatatc aagcgacagc
     4861 ctgcgccgga gtttggaggt gttcaataat aacaccggtg cgacgacggt gtacatgggt
     4921 ggtggaggct cgtaagcatt ctgaaccatg gaacagaagt acagcctaac gaaaagtccc
     4981 aacgggcaag acaatgagag gaaaaggcca caaagtgcag gggcgcggcg ggacagcgcc
     5041 cctgccggga caatcaagcc tggttctccc cacttttgca catgcgcgaa ataaccatgc
     5101 tgcgctacac gaaggtcttc gtgtctgcgg cacggccaat tcgccgtcgc gaactggcga
     5161 caaatcattc cctgaccgtt tttggcagcc tggatttcca aacctgccgc atagccgatc
     5221 ccctcaaatc ggccaggcgc gaagcggcgc ttgaggtggg tttggaaacc tgtgctgcgg
     5281 cggtcaggcg gcgcaatctt actcataact tgagcttgtc attcgtcgca tcctgccacc
     5341 ggtaaatctc ggtagtgaaa cgggaaacta ctgccgcgta ttgcgcatcc gagtaaagat
     5401 tgcgcgtttc gaatggatcc tcattcaaat tgtataattc attcaagtcc ttatcgcgca
     5461 ggcacagctt ccagccgtcg ggagaaacca gcgtccgggt ggattcttcg acggcacgct
     5521 tgatcattcg ccgacgagcg agcttgctgc ccttttttac tttcgtccgg ttcggagccc
     5581 actcgagaaa gacattattt ggcgaagcga tcgcgtcatt gatcaacggc aacagacttt
     5641 tgccggcgca ctgcggatga tttgattcgc cgagaagatc gagcagtgtc ggcacgaaat
     5701 cgatgtggct tactggattt gaaatcaact tctgccgcgt ttggcccggc aaccgaatca
     5761 gccagggaac gcgggtggct tcttcgaaca tcgtctcttt tccgaaaaga tgatgcacac
     5821 ctaacccgtc gccgtggtcg ctcgtgtgca tcacaatcgt gtgctccgtt aggccgcatc
     5881 gttcaagaca actaagaatt gcgccgatgc tttgatcgac caacgtgact aggccgaggt
     5941 aacgttgttt gatgctgcgg tattcgtccg gcgtaattcc gaagaacaac tgcatcggca
     6001 gccgctcccg atccaacagc gcttcagctt gctgccattc gcgcatcaaa cggtaccgca
     6061 acggaatgtc ttcgctctcc ggaatcgtag ccggcgcgtc aagcgtcacg tcgtcgagcg
     6121 gattcacatt gttgagcggg ccgttgtaag gcgaatgcgg ttccacgaac gcaaccacca
     6181 gaatgaatgg atcgcgctga gatttctcga tgaagtcgca cgcgtgtttc tcaagaaact
     6241 ttggccgcga caactcaatc ggcagattgc tgatggctac ttcggaaaat cgtccgttcg
     6301 ctttgtccgg cgtaatgctt tttgaaatca gaaaattgct gtagtccccg tcaccatctg
     6361 tggaaatgca atgctggaat ccgcgtccgg cgggcccgtc ctcgccgaga tgccatttgc
     6421 cgatgtaagc ggtgcgatag tccctgtctg gcattagctc tgggaaaacg cgaaaccgcc
     6481 gaccaagcgg cacactattg tgcgtgcacc cgttgatgtg tggccacgtt cccgtcatga
     6541 gtgatgaccg cgaaggcgtg caaaccggat gcgtaacgta cgcgcgctcg aaaatcaccg
     6601 attcagacgc aagtttgttc agattaggcg cgtgaacctt tacgcctccg tagcaggcga
     6661 gcgtatcggc gcgttgctgg tccggaagaa acagaattag gtttggcttt cgttgtgcgg
     6721 ccattcggta cgagtccgca ctaaatcagc agtcgctatc gactgcaatg attcaactgt
     6781 agccgtcgcc ctgtgggcga cgcgcacgct tccc
//
LOCUS       DATDAJ010000143         4898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_874746, whole genome shotgun sequence.
ACCESSION   DATDAJ010000143 DATDAJ010000000
VERSION     DATDAJ010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4898
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_874746"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VIS53_03340"
     CDS             <1..203
                     /locus_tag="VIS53_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEY5766853.1"
                     /translation="METKSGQPLSPCVEINGHMLADISGEEVERYLVENKLVDASDAA
                     TDVPTNAPCANEQHEGVVKLNL"
     gene            341..2509
                     /locus_tag="VIS53_03345"
     CDS             341..2509
                     /locus_tag="VIS53_03345"
                     /inference="COORDINATES: protein motif:HMM:TIGR02074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEY5766854.1"
                     /translation="MKVFARLRRPKKARSNILFHYGWKVTLLLLLAGAVFAVFLFYGT
                     WAHTFDMKKVGEMPERSTVYDVDGKIYSRLAGANRLRVSLSEVSPEFIAAVLAREDTR
                     FYDHKGIDWRGVLRALSRDLVSMSAKEGASSLTMQLARNSLPLGGRTFSRKFLEAMVA
                     LRIERDFTKQQILELYVYRIYFGAGCYGVETASQAYFGKNASKLNLSEAALLAGLIRS
                     PNRFSPLKNPDGAAIQRDAVLDRMVTLKKITPSQAEQAKKTKIVTHPKRMPQIQENYA
                     MDAVQRALSQILTQDQMDVGGLSIYTTLDPSVQNAAQDALETQLSKVEHQSNFRHPTK
                     AEYKTPENEEGDAAMPYLEGAVVVIDNASGGIRALVGGRDYAQSKFNRALAPANRQVG
                     SAFKPFVYTVAFSHGLLPSSAISDGPIQSGEIDGAGNWSPANSDGTYGSTMPCSYGLI
                     HSRNTMSVRVGQFAGLDTVQKIANDLGIAQNIPHGPASYIGSFESNLKDLTSAYTVFP
                     NAGVRRQAYIIERIDDQQHKPIYLAAHISSQALDPGSVWMTSRLMQEVLTQGTAASAR
                     SLGFKLPAAGKTGTTNDYKDAWFIGYTSTLTCGVWVGFDQPTTIVARGYGAALALPVW
                     TQVMNKASRHYPAELLQPTMPLEHATVCSISNQLATTGCMSAATAFDIDLPVGKVPTS
                     ACPVHGGSQWPFAQRAPNGPQKAPAFSGRLFKSFRRFFGR"
     gene            2818..2976
                     /locus_tag="VIS53_03350"
     CDS             2818..2976
                     /locus_tag="VIS53_03350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766855.1"
                     /translation="MPASGEAIESGFDHTPGVGNAVILQSQFSGLHFLEDPPEKLMRM
                     IFDKRKFG"
     gene            complement(3334..3636)
                     /locus_tag="VIS53_03355"
     CDS             complement(3334..3636)
                     /locus_tag="VIS53_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766856.1"
                     /translation="MKTKTIALSLGLILVAGGLYAADPWEGTWKLNEMNDRTLSITVK
                     KGGEVLAHGLIIVSADGKSQDVSLTSSAAAMSVYNEEAREKAKDKAFRNKAVYDKE"
     gene            complement(3672..3742)
                     /locus_tag="VIS53_03360"
     tRNA            complement(3672..3742)
                     /locus_tag="VIS53_03360"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3708..3710),aa:Gly,seq:ccc)
     gene            complement(3905..4591)
                     /locus_tag="VIS53_03365"
     CDS             complement(3905..4591)
                     /locus_tag="VIS53_03365"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEY5766857.1"
                     /translation="MRQPAKNHPCGKFAIAGARSPAREARALPTRDRAFTLIELLVVI
                     AIIGILMAFLVPSLFSIYERARKTQAKNDLTQIVNAVNAFYTEYGRYPIATAGADVTF
                     QPGGTENEVLFKELRACQTGQQSCPNAASLNTRQIVYLSPRVLGTAPVRSAIASDNGQ
                     FYDPWQTPYRVRIDGNYDNQITTNPYGNNSGAGPMPLPQGVIAWSLGKDLILGNGGAF
                     TGSDDVISWQ"
BASE COUNT         1124 a         1319 c         1317 g         1138 t
ORIGIN      
        1 aaatggaaac caaaagtggg cagccgcttt cgccgtgtgt cgagatcaac ggccacatgc
       61 tcgccgacat cagcggcgaa gaagtcgaac gttatctcgt cgagaacaag ctcgtcgacg
      121 cgagcgatgc cgcgaccgac gttccgacca acgcaccgtg tgcgaacgag caacacgagg
      181 gcgtagtaaa actcaatttg tagacgttgt gcggcgtttc cttgaaacgc caccgcgtcc
      241 agctcggcgg acgcctcgca attcgcattc cgcgcagcga gcgatttggt tttctttcgc
      301 gcaacgcgat gtgcggctag attgtttagt tttctagcca atgaaagtgt tcgctcgcct
      361 tcgacgcccg aagaaagcgc gctcaaatat tctttttcat tacggctgga aggtaacgct
      421 ccttctattg ttggcaggcg ctgtgttcgc cgtctttctc ttttacggca cctgggcgca
      481 caccttcgac atgaaaaagg tcggagaaat gccggagcga agcaccgttt acgatgtcga
      541 tgggaagatt tacagccgtc ttgcaggcgc gaatcgtctc agggtttcgc tgagcgaagt
      601 ctcaccagaa ttcatcgcgg ctgtgctggc gcgcgaggac actcgattct atgaccacaa
      661 aggtatcgat tggcgtggag tgctgcgtgc gttgagccgc gaccttgtca gtatgtcggc
      721 gaaggaaggc gcgagcagtc tcacgatgca actggcgcgg aacagccttc ctctgggtgg
      781 ccgcacgttc agccggaaat tcctggaggc aatggtggcg ctgcgaatcg aacgcgattt
      841 cacgaagcaa cagattctcg agctatacgt ttatcgcatt tatttcggtg cgggttgtta
      901 cggagtcgag accgcttcac aagcttactt tggaaagaac gcttcgaagc tgaatctttc
      961 ggaggctgct ctgctggcgg gtctcattcg gagcccgaat cgtttctcgc cattgaaaaa
     1021 tcccgacggc gcggcgattc aacgcgacgc ggtcttggac cgcatggtga cactgaaaaa
     1081 aattacaccg tcacaggccg agcaggccaa aaaaacaaaa atcgtcaccc atccgaagcg
     1141 aatgccacag atccaggaga actatgccat ggacgctgtg cagcgcgcct taagccagat
     1201 cctgactcaa gaccagatgg atgttggagg cctttccatt tacacgacgc tcgatccatc
     1261 tgtgcaaaac gctgcgcagg acgcgctaga gacgcaactg agcaaggtcg aacaccagtc
     1321 gaacttccgg catccgacca aggcggaata caaaactcct gaaaacgagg aaggcgacgc
     1381 tgcgatgccg tacctcgaag gcgctgtagt cgtgatcgat aatgctagtg gcgggatccg
     1441 ggcgctcgtg ggcggccgcg attacgcgca aagcaaattt aatcgagcat tggctccggc
     1501 gaaccggcaa gttggttcgg ccttcaagcc ctttgtttac acggttgcgt tcagccatgg
     1561 cttattgccg agttcagcga tcagcgatgg cccaattcag tcaggcgaaa tcgacggcgc
     1621 gggcaattgg tcgcccgcaa actccgacgg tacttacggc agcaccatgc cgtgctccta
     1681 tggtctgatt cattcgagaa ataccatgag cgtgcgcgtt ggccagttcg ccggactcga
     1741 tacggtacaa aaaatcgcga atgatcttgg cattgctcaa aacattccgc acgggcccgc
     1801 cagctacatc ggttcgttcg agagcaatct gaaagatctg acttccgctt acaccgtgtt
     1861 tcccaacgcc ggggtgcgca ggcaggcata catcatcgag cgcatcgacg atcagcaaca
     1921 caaaccgatt tatctcgcgg cgcatatttc ttcgcaggcg ttggatcccg gctcggtctg
     1981 gatgacttcg cgcctgatgc aggaagtttt gacccaaggc accgccgcaa gcgcgcgttc
     2041 gcttggcttc aaattgccgg cagcgggtaa gactggcacc actaatgatt acaaggatgc
     2101 atggttcatt ggttatacga gcacgctcac ctgtggggtg tgggtgggat tcgatcaacc
     2161 gacgacgatt gtcgcgcgcg gttacggtgc tgctctggca ttgcctgtct ggacgcaggt
     2221 gatgaacaaa gcgtcgcgac attatccggc cgagctgttg caacccacca tgccactcga
     2281 acacgcgacg gtctgttcga tttccaatca actcgccacc acaggatgca tgtcggccgc
     2341 aaccgccttc gacatcgatc taccagtcgg caaggtgccg acttccgcct gcccggtgca
     2401 tggtggttcg caatggccct ttgcacaacg ggcgccgaat ggacctcaga aagcacctgc
     2461 tttttccggc cgcttgttca aatcgttcag gcgattcttc ggacgctaag cgatttagcg
     2521 gcaacgccgc cgattgcgat cggcataaca acagcggcag aattcagcct cgcatgaagc
     2581 aaaaaaggag cgcagcacaa agcgacacag gccgccgtgt ttgaaaggcg tttaccggac
     2641 tttgctgaag attacaactg gcttagtggc cagcaggccc ttgaggagga ggctcaggcg
     2701 gtggtggtgt cggtgtttct tttctttgtg ccatcccaaa tccttaaatg gacggagcgc
     2761 tatgtcgaga catgatttgt ataagaccaa agaataattg ctcaggagtc gccccacatg
     2821 ccggcaagcg gtgaagcaat cgaatccggt ttcgatcaca caccgggagt gggcaacgca
     2881 gtaatccttc aaagccaatt ctccgggttg cattttcttg aagatcctcc ggaaaagttg
     2941 atgcggatga tattcgataa acggaaattt ggttaggaaa aatctccagg aactgccgcc
     3001 aaagtctgca gttcgccgtt gcggcaggac gcacatcttt cggatagtta caccgatcct
     3061 tgtattctga tttggcatgt gataaacgcc aacacccttg ctccacatgt ccgttttgag
     3121 aagttacctg ctgggtttga tagtggctca cgtcgtgtgg ttttgagggt attatgaaaa
     3181 agcgggtgaa aggaatcgaa ctgcgtcagc aaaatccaga tcggtcgctc tttggaatca
     3241 atcggatggc aaatgaaata cctcccgatg ccacagacaa ttcccgcaca cgtttacttg
     3301 atccgcgtca atgtcaggat cgggcctaac ggattattct ttgtcgtaaa cggccttgtt
     3361 cctaaacgct ttgtccttcg ctttttccct cgcttcttcg ttgtaaacgc tcatcgcagc
     3421 ggcggacgag gttagactta catcttggct ttttccatcc gcagacacga tgatcaaacc
     3481 gtgggccaga acctcacctc cctttttgac ggttatggag agagttcgat cattcatctc
     3541 gtttagcttc cacgtcccct cccaaggatc agccgcgtat aaccccccgg cgactaagat
     3601 caatcccaag ctcagtgcaa ttgttttcgt tttcatttct ttcgtttttg gccctgtttc
     3661 ataggtgaat gagcgggtga ggggaatcga acccccgtgt gcagcttggg aagctgccgt
     3721 tctaccattg aactacaccc gcaaagagat ttttgatttt agatttccga ttgacgattg
     3781 caatcgaaac aaattcgcac tccaaattgc tgtagcgtgc actgtcctca ccgcaaagag
     3841 aatacatcgg agtctttgac cgctgaggac cgcagacctt acagcacggc gaactcgcaa
     3901 acaatcactg ccacgaaatc acgtcatcgg agcctgtaaa ggcaccgccg ttgcccagta
     3961 ttaaatcttt acccagagac cacgcgataa cgccctgtgg aagcggcatt ggaccggcgc
     4021 cgctgttgtt tccgtaggga tttgtagtga tttgattatc gtaattgcca tcgatcctaa
     4081 ccctgtaagg cgtttgccac ggatcataga attggccgtt gtcgcttgcg attgctgagc
     4141 gcaccggggc tgtgcccaag acgcgcgggg aaagatagac gatctgccgc gtgttaagag
     4201 aagctgcatt tggacacgat tgttgtcccg tttggcatgc tcgaagttcc ttaaatagaa
     4261 cttcattttc tgttccccca ggctggaacg tcacatcagc gccggccgta gcgatcggat
     4321 accttccata ttccgtgtaa aacgcgttca ccgcgtttac gatttgggtg agatcgtttt
     4381 tggcctgggt ttttcttgcc cgttcataga tgctaaacaa cgacggaact agaaaggcca
     4441 tcaaaatccc gatgattgca ataacaacca gcaactcgat aagagtgaag gcgcggtctc
     4501 ttgtggggag cgcacgcgcc tcgcgtgctg gcgatcgcgc ccccgctatc gcgaactttc
     4561 cgcagggatg attttttgcc ggctgtcgca tggcgccgcg attataccgc cttaaagagg
     4621 ttgaaccaac cggcgtccgg cgcggcggac gccctacaat tctggggtgc attgagccga
     4681 cattatgccg cgaaatgagt ttgcacaatg tttcgtcgaa gcagtagagg cggctgtgtc
     4741 agccgcgaat caaattcaat gcgggcggca cgcccgccac tacagctttc acttccagtt
     4801 cctcatttgt tccgggaaag ggcattgtgc gcaatcggaa ttgtcctgca tgcaaaaatc
     4861 ttcgtagatc tggagcagcc cttgttggtg cgcgaccg
//
LOCUS       DATDAJ010000144         3254 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_883134, whole genome shotgun sequence.
ACCESSION   DATDAJ010000144 DATDAJ010000000
VERSION     DATDAJ010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_883134"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VIS53_03370"
     CDS             <1..416
                     /locus_tag="VIS53_03370"
                     /inference="COORDINATES: protein motif:HMM:NF013614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HEY5766858.1"
                     /translation="ARTLQDHVSPRTASDLLYKNALDDRARTIFGGLIRVEPHAHFTD
                     AYQKVRNLLLSDDAEANSMPGLEILADNVRCTHGATSGQIDEDELFYLRTRGIPTNVA
                     QRLLVTGFLDEVIRRLDHPAIADHLHRLIEEKFGT"
     gene            complement(477..1406)
                     /locus_tag="VIS53_03375"
     CDS             complement(477..1406)
                     /locus_tag="VIS53_03375"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEY5766859.1"
                     /translation="MAKEPPSQRYSTPGGRFWGNVFLIALAHAALIAGLIRWSVAARA
                     SPNPESIVWLGGQGDLSAGESRKQESPAPKQPATDTEPSESEQDEAADEKTLGTTAKS
                     EIELPTATPKPTATATPVPKPSATPALRAKPTPKPIPKPTPKKTMAAKASPKPAAKPK
                     SSPPKANAKSEKKDKIVLSKKDSPSPSESGQSGSTGKAGSASGGSSASEFGWYGNMLH
                     DRFYSAWIQPTTKVPSGAKISTLVNVRIEKDGRVSKFEIAKPSENATVNESVAAVARQ
                     ISQVDPPPTGLIKGDHYDVKINFELNTEEKQEN"
     gene            complement(1407..1823)
                     /locus_tag="VIS53_03380"
     CDS             complement(1407..1823)
                     /locus_tag="VIS53_03380"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY5766860.1"
                     /translation="MRRYSQRQNLSTLSEINITPLLDLAFVLLIIFMITTPLLESSMN
                     LVIPSSGTKNPPINTAQVQTVSIDRTDTIRFNNQVIDLETLTTQLMQLKQANPEIAIV
                     IRPDHDLPVQKLIGVMDALQRAGITKVGIATKAEPN"
     gene            complement(1820..2626)
                     /locus_tag="VIS53_03385"
     CDS             complement(1820..2626)
                     /locus_tag="VIS53_03385"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY5766861.1"
                     /translation="MAFPQNGVITNAGDSGMLVPEIVAAGGGLLFAFDHATIAGKIVL
                     TLLAVVSIFSWSIMITKLRVIRFARRQNARFLAAFHKDRQPLRLFEKNARFPGAPVFN
                     VYRAGCEEMTFHLLGSSEVDDTFRARLEIADKISPAQMGAVNAAMERAVGETALSLES
                     QMILLATAVSGSPFLGLLGTVWGVMDAFVGVAEAGSPNLVAMAPGVSGALITTVVALC
                     VAIPAMFGYNFLVTSIRGIIVEMDNFAAELASEFEHKYVDHGSRESAFRR"
     gene            complement(2664..>3254)
                     /locus_tag="VIS53_03390"
     CDS             complement(2664..>3254)
                     /locus_tag="VIS53_03390"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEY5766862.1"
                     /translation="HKISWLNLGDNLVVTAPLGLFFGRCANFINGELYGRIANVPWAM
                     QFPKELFDHPQEAERAVAACAQTNPSLTTPDAIVGAVRSQPEVANALRSILSPRHPSQ
                     LYEAFFEGLVLFAILWFVRTRTRQPNGVLTGLFFICYAVFRIVVENFREPDAELIGPF
                     TRGQFFSFFLVAIGIAFIVAAKRRPTFPKNISVKSR"
BASE COUNT          692 a          914 c          878 g          770 t
ORIGIN      
        1 acgcacgcac attgcaggac cacgtctcgc cgcgcacggc gagcgacttg ctttacaaaa
       61 acgcgctcga cgatcgcgct cgtacgattt tcggcggtct gatccgcgtg gaaccgcacg
      121 ctcattttac cgacgcttac caaaaagttc gcaaccttct cctgagtgac gacgccgaag
      181 cgaattcgat gcccggcctc gaaatcctcg ccgacaacgt ccgttgcacc cacggcgcaa
      241 cctcaggcca gatcgacgaa gatgaactct tctatctgcg cacgcgcggc attccgacaa
      301 atgtagctca gcgcctcctc gttaccggct ttctggacga agtcatccgg cgtctcgatc
      361 atccagcgat agctgatcat ttgcaccgcc tcatagaaga gaagttcggc acataggccc
      421 tcgggagcac gcgtcttgcg tgtcgctttc ggcattctcg gcgaagattt tttcgatcag
      481 ttctcctgtt tctcctcggt attcagttcg aaattgattt tcacgtcgta atgatcgccc
      541 ttgattagcc ccgtcggcgg cggatcaacc tggctgattt gtctcgcaac cgctgcaact
      601 gattcattca ctgtggcgtt ctcggatggt ttggcgattt cgaatttcga aacgcgaccg
      661 tccttttcga ttcgcacgtt caccagtgtc gaaatcttgg cgcctgaagg gaccttcgta
      721 gtgggctgga tccacgcact gtaaaaacga tcatgcaaca tattgccgta ccagccaaat
      781 tcggacgcac tgcttccgcc gctcgcgctg ccagctttgc ctgttgatcc gctttgcccg
      841 ctttcgcttg gagacgggga atcctttttt gagagcacaa ttttgtcctt tttctccgac
      901 ttggcgttcg ctttcggtgg gctggacttc ggttttgccg ccggttttgg agaagctttc
      961 gcagccatgg ttttcttagg agtcggtttc gggatcggtt ttggagttgg cttcgctctt
     1021 aatgcaggag tggcgctcgg cttcggcacc ggtgttgctg ttgccgtcgg tttcggagta
     1081 gccgttggca attcgatttc gctcttcgcg gttgttccaa gagtcttttc gtctgcggct
     1141 tcatcctgtt ccgactcgct gggttcggtg tcagtggctg gctgctttgg tgctggcgat
     1201 tcttgttttc gcgattcacc ggcagagaga tctccctggc cacctaacca gacgatgctc
     1261 tctggattcg gtgatgccct cgctgccaca ctccaacgga tcagtcccgc gatcagcgcg
     1321 gcgtgcgcca gcgcgattag gaagacgttt ccccaaaaac ggccgcctgg cgtactgtac
     1381 ctctgcgaag gcggctcttt cgccatttaa ttcggttctg ctttggtggc gatgccgacc
     1441 ttcgtgattc cagcgcgttg caatgcgtcc atcacaccga ttaatttttg cacaggcaaa
     1501 tcgtgatcgg gtcgaatcac aatggcgatc tccggattcg cctgtttcaa ctgcatcaac
     1561 tgggtcgtca gagtttccag gtcgatcacc tgattattaa accggatcgt gtcggtgcga
     1621 tcgattgaga ccgtttgcac ctgcgctgtg ttgatgggcg gattcttcgt gccactggat
     1681 gggatcacca ggttcatgct gctttcaagc agcggcgtgg taatcatgaa tatgatgagc
     1741 aacacaaaag cgagatcgag cagaggcgtg atattgatct cgctcaacgt ggagagattt
     1801 tggcgttgcg agtaacgtct catctgcgaa acgcggattc acgcgacccg tgatcgacgt
     1861 atttgtgctc gaattcggat gcgagctcgg cggcgaagtt atccatctcc acgatgatcc
     1921 cgcgaatgct ggtaacgaga aagttgtaac caaacattgc cggaatcgcc acgcagagcg
     1981 cgacgactgt ggttatgaga gcgccagaaa caccgggcgc cattgccacg aggttgggtg
     2041 agcccgcctc agcgacgcca acaaacgcgt ccatcactcc ccagaccgtg ccgagcaatc
     2101 caagaaaagg cgaaccgctc accgcggtag cgagcagaat catctgcgac tcgagcgaaa
     2161 gagctgtctc gcccaccgcg cgttccattg cggcgttgac agctcccatt tgagccggtg
     2221 aaattttgtc agcgatttca agtcgcgcgc gaaatgtgtc atccacttcg gatgatccga
     2281 gcaaatggaa tgtcatttcc tcacaccctg cgcgatacac attgaaaacg ggcgcgccgg
     2341 gaaagcgcgc gtttttctca aacagacgaa gtggctgtcg gtctttgtga aaagcagcga
     2401 ggaaacgagc gttctgtctc cgcgcgaaac ggatcacgcg caatttcgtg atcatgatcg
     2461 accaactgaa aatcgatacg acagccagaa gagtgagaac gattttgccc gcgattgtcg
     2521 cgtgatcgaa cgcaaacagc agaccgccgc cggccgctac gatttccgga acgagcattc
     2581 ccgagtcacc ggcattagta ataacgccgt tttgcggaaa cgccacccgt catttcttcg
     2641 gaaggacagc gtagcgtgcc gtcctacctt gatttcaccg aaatgttttt cgggaacgtg
     2701 ggtcgcctct ttgccgcgac gatgaacgca ataccaatgg cgacgagaaa aaacgaaaag
     2761 aattggccgc gcgtaaacgg cccgatcagt tcggcatcgg gctcgcggaa attttcgacc
     2821 acgattcgaa acacggcgta acaaatgaaa aacagtccgg tcagaacccc gttcggttgg
     2881 cgagtgcgcg ttcgcacaaa ccacaaaatt gcgaacaaca cgagaccctc gaagaacgct
     2941 tcataaagtt gcgacggatg ccgcggcgac agaattgaac gcagtgcgtt tgcaacttcc
     3001 ggctgactgc gcaccgcgcc gacgattgcg tctggtgtgg tcaatgatgg attggtctgc
     3061 gcgcatgctg ctactgcacg ctccgcctcc tggggatgat cgaacagttc ctttggaaac
     3121 tgcatcgccc agggaacatt cgcgatccgt ccgtaaagct caccgttaat gaagttcgcg
     3181 catcgtccga agaacaatcc gagcggcgca gttacgacga gattgtcgcc gagattcaac
     3241 cacgaaattt tgtg
//
LOCUS       DATDAJ010000145         4016 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_885219, whole genome shotgun sequence.
ACCESSION   DATDAJ010000145 DATDAJ010000000
VERSION     DATDAJ010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_885219"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VIS53_03395"
     CDS             complement(<1..374)
                     /locus_tag="VIS53_03395"
                     /inference="COORDINATES: protein motif:HMM:NF013874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEY5766863.1"
                     /translation="MRIDIVTLFPEICRAPLSESIMKRAQENRIVDLHIHNLRDWTTD
                     KHHVVDDAPFGGGQGMVMKPEPIFAAVEALRKTPNIERPTSNAEHSAISNRKSKILLM
                     SPAGRRLDQQVAQQLSQESHLI"
     gene            complement(478..708)
                     /locus_tag="VIS53_03400"
     CDS             complement(478..708)
                     /locus_tag="VIS53_03400"
                     /inference="COORDINATES: protein motif:HMM:NF024483.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEY5766864.1"
                     /translation="MREFLEFIIRELIEFPDDMVLTEIPNGRMITFKLQLRRGDVGRV
                     IGRSGQTIHAIRALLASSAARHGQRAVLEIVE"
     gene            complement(881..1117)
                     /gene="rpsP"
                     /locus_tag="VIS53_03405"
                     /pseudo
     CDS             complement(881..1117)
                     /gene="rpsP"
                     /locus_tag="VIS53_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980239.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
     gene            complement(1124..2446)
                     /gene="ffh"
                     /locus_tag="VIS53_03410"
     CDS             complement(1124..2446)
                     /gene="ffh"
                     /locus_tag="VIS53_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEY5766865.1"
                     /translation="MFPQLSDKLQEIFKDLRGHGVISEANIDAALRQVRMALLEADVD
                     FQVARKFIARVKEKALGENVLRSITPGQQIVKIFHDELTVLLGGDAEPLRLENQTRIL
                     IVGLNGSGKTTSAAKLALLLKKQGRMPSLVACDLQRPAAIEQLATLGKQIDIPVHVPE
                     AGEKNVQRVAAAALEKTRTTAASNVQIFDTAGRQEIDEALMDELKALKEFLQPHEILL
                     VADAATGQQAVSIARRFDAALSITGIILTKLDGDARGGAALSMREVTHRPIKFAGTGE
                     KLDQFELFIPERLAGRILGMGDVVSLVEKAAEAVEAEDAARLERKLRTASFDFNDFLA
                     QFKMMRRMGPLENILGMLPGMSNVPGLSVDEKQLKRTEAIVLSMTREERTRPDILNAR
                     RRQRIARGSGSTVTEVNDLLRRFDQMRKLMKNAGKMKKMMAQMARMKT"
     gene            complement(2510..3796)
                     /locus_tag="VIS53_03415"
     CDS             complement(2510..3796)
                     /locus_tag="VIS53_03415"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY5766866.1"
                     /translation="MMIRFAILPLLLALNLSMCKKQQAVTDKPQPADSAAPGTAAATA
                     APVAAATPKIKKPVVDQTAQVLIFCYHRLVDKIRYPGTEITPAAFEAQMKELKDKGIT
                     VIPMQDLLAWKRGEKNIPPRCAVVTFDDGWKSQYDVAWPILKKYGYPFTMFIYTEGVR
                     GGALGGGEAITWEQLADLRDNGVDIQAHSGTHQDLREGHTVLVIEPGGKRSKKKLTGA
                     DYEKWVQNEVVGCKELLEQRLGIKVNCYAVPFGNYNEHVKELARNAGYEAMFTVYGQP
                     ITFTSPMDSIGRYAIEANKPKVFADAVSMIGASTGGGTAVAELGAKDLTTQPADGDTV
                     RTATPLIKANLSSVGQIEPGSVQMRVSGLGLVPANFDPKTGTVSYQVPQKLRDKSCTV
                     ILSAKSAGKKVETHWTFGIEEGPATAASSPAAAAKK"
BASE COUNT          835 a         1148 c         1029 g         1004 t
ORIGIN      
        1 attatgagat gcgattcttg tgacagctgc tgcgccacct gttgatccaa tcgacgtcct
       61 gcaggcgaca ttaacagaat tttcgatttt cgattgctga ttgccgaatg ttcagcattg
      121 gacgttgggc gttcgatgtt cggcgttttc cttaacgctt ccaccgccgc aaaaatgggt
      181 tccggcttca ttaccatccc ctgcccaccg ccgaacggcg catcatcgac cacgtgatgt
      241 ttgtccgttg tccaatcgcg caggttatga atgtgcagat cgacgattcg attctcctgc
      301 gcccgcttca taatgctttc gctcaaagga gcgcggcaga tttcaggaaa caacgtgaca
      361 atgtcgattc tcatttaacg aagaaaacgt ccaacgctga acgcccaacg tccaatgcca
      421 aactgcccta gcgttgctga ggaaatgcgg tggcgtcgga cacagccgcc cctactatca
      481 ttccacgatc tcgagcaccg cgcgctgtcc gtgacgcgcc gccgagctgg ccagcaaggc
      541 gcgaatagcg tggatggttt gaccagaccg gccgatcaca cggcccacat ctccgcgtcg
      601 aagttgcaat ttaaaagtga tcattctgcc gttgggaatt tccgtgagca ccatatcatc
      661 aggaaattcg atcagctccc gaatgatgaa ctccaggaat tctcgcatcc gtgaaaaggg
      721 taaccacgaa tggacacgaa taaacacgaa ttttgtcggg cgtccgtgtc gaacgccaaa
      781 tgccgggcta gcttgccgtc tctgcagaga gcgatgaatc tgcttcagcc ggttctgaac
      841 tctctccctc tggttcagat gctggctcgg cagtaaccgt cttcttttgt ttcttaatca
      901 aactccgcac agtgtcggac ggtcgcgcgc ccttgctgat ccaatattcg gcgcgctcaa
      961 cactgaacga actgttttga ccagtcagct tgggatcgta agtgccaatg atctcgataa
     1021 atttcccgtc gcgtgggctg cggctgtcgg caactacgat tctgtagtac ggccggtttt
     1081 tgctgccttc tctgcgtaat ctgattgaaa ctgccatggt taattaagtt ttcattcgcg
     1141 ccatttgcgc catcattttt ttcatctttc ccgcgttctt catcagtttc cgcatctgat
     1201 caaagcgccg cagcaaatca tttacctccg tgacggtgga accgctgccg cgcgcgatgc
     1261 gttgacgccg ccgggcattc agaatgtcgg ggcgtgtccg ctcttctctt gtcatcgaaa
     1321 gcacgatcgc ttccgtgcgc ttgagctgct tctcgtcaac ggagaggccc ggcacgttac
     1381 tcattccggg taacatgcca agaatattct ccagtggccc catgcggcgc atcattttga
     1441 actgcgccag gaaatcattg aaatcgaatg aagcggtccg gagtttgcgc tcaagcctgg
     1501 cagcatcttc ggcttcgacg gcctcagcag ctttttcgac gagactgaca acgtcgccca
     1561 ttccaagaat ccgacccgcg agccgctctg gtataaacag ctcaaactga tcgagctttt
     1621 cacctgtgcc ggcgaacttg atcggtcggt gcgtgacctc gcgcatcgac aatgccgcgc
     1681 cgccgcgggc gtcgccatca agcttcgtca gaataattcc tgtgatagac aaagcggcgt
     1741 caaacctcct cgcaatactc accgcttgct gcccggtcgc cgcatctgca acgagcaaaa
     1801 tctcgtgcgg ctgcaaaaat tctttgagcg ctttgagttc atccataagc gcttcatcga
     1861 tttcctgtcg gcccgccgta tcaaagatct gcacgttaga cgccgctgtt gttcgcgtct
     1921 tctcaagcgc cgctgcggcg acacgctgca catttttttc gcccgcttcg ggaacatgaa
     1981 ccgggatatc gatctgtttt ccaagcgttg cgagttgttc gatcgcagcg ggccgttgca
     2041 aatcgcacgc caccagcgat ggcatgcgac cttgtttctt caataacaac gccagcttgg
     2101 cagcggaggt tgttttaccc gagccgttga gtccaacgat caagatgcgt gtttgatttt
     2161 ccaggcgaag cggctctgcg tcgccgccaa gcagcaccgt caattcgtcg tgaaaaattt
     2221 ttacgatctg ctgaccgggc gtaatgctgc gaagtacatt ttcaccaagc gccttctcct
     2281 ttacgcgggc aatgaatttt ctggcgacct gaaaatcaac atccgcttcg agcaacgcca
     2341 tccgaacctg gcgcaacgca gcgtcgatgt tcgcctcgct gataacgccg tgtccacgga
     2401 gatctttgaa aatctcctga agtttgtcgc taagttgagg aaacataagt aaagggcgct
     2461 ttgcaagtgc gccgcggcga cggaaaacgc tcgctacttg ggctcgcgat tattttttag
     2521 ccgctgccgc tggcgagctt gcagctgtag cggggccttc ttcgattccg aaggtccagt
     2581 gtgtttcgac ttttttgccc gcggatttcg cgctcagaat gacggtgcaa ctcttgtcac
     2641 ggagcttttg tggcacctga tacgatacgg tgccggtttt cggatcaaag ttggccggaa
     2701 caaggccaag accgctcacg cgcatttgca cactcccggg ctcgatctgc cctacgctgc
     2761 ttaggttcgc tttgataagc ggcgttgccg tgcgcacggt gtcgccgtct gccggctgtg
     2821 tcgtcagatc tttcgcaccg agttcggcta ctgccgtgcc acctccagtg gaggcaccga
     2881 tcatgctgac tgcatcggca aacactttcg gcttattcgc ttcgatcgcg tagcggccga
     2941 tcgaatccat cggtgaagta aacgtgatcg gctgcccgta gacggtaaac atcgcctcgt
     3001 aaccggcatt tcgcgcgagc tccttcacat gctcgttata atttccgaac ggcaccgcat
     3061 agcaattcac cttgatgccg agccgctgtt cgagcagttc cttgcaaccg acgacttcgt
     3121 tttgaaccca tttttcgtag tcggccccag tcagcttctt tttggagcgt ttgccgccag
     3181 gctcaatcac cagcacggtg tgcccttcgc gcaaatcctg gtgcgtgcct gagtgcgcct
     3241 gaatatcaac gccgttgtcg cggaggtcgg cgagctgttc ccaagtgatc gcttctcctc
     3301 cgccgagagc gcccccgcgc acgccttcgg tgtagatgaa catcgtgaac ggatagccgt
     3361 actttttcag aatcggccac gctacgtcat attgcgattt ccaaccgtca tcgaaagtaa
     3421 ctacggcgca acgcggcggt atgttctttt cgccccgctt ccacgcgagc aaatcctgca
     3481 tcgggatcac cgtgataccc ttgtctttca attccttcat ctgcgcttca aaggcagcag
     3541 gcgtaatctc cgtgcccggg tatcggatct tgtcgaccag ccgatggtaa caaaaaataa
     3601 ggacctgggc agtttgatcg acgacgggct tcttgatctt gggagttgcc gccgccaccg
     3661 gagcagccgt cgcggcagct gttccagggg cagcgctatc cgcaggttgc ggtttatcgg
     3721 taacagcttg ctgctttttg cacatcgaaa gattcagtgc cagcagtaat ggaaggattg
     3781 cgaatcggat catcataaga gtgttaaggg attaaagatg gtggcgcaaa acacaagtgc
     3841 attttatacg cgatattgga aacatgcgaa tcgttgacac aattcaagtc tacttgttcc
     3901 aatttcagta aaacattttg atgcaccatc ggttttgcta cgagatgaga atgtcgtgtc
     3961 tggtcactcg gatcgttaca cccgcgtttg tcgccttatt agcggcgtgc ggcacg
//
LOCUS       DATDAJ010000146         6423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_892865, whole genome shotgun sequence.
ACCESSION   DATDAJ010000146 DATDAJ010000000
VERSION     DATDAJ010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6423
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_892865"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1623)
                     /locus_tag="VIS53_03420"
     CDS             complement(127..1623)
                     /locus_tag="VIS53_03420"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY5766867.1"
                     /translation="MTVRLPKDAEMHEKINQPIFVVGSPRSGTSILTWCLGQHPNMFP
                     VPESNWMGEFAVNIASSYQVGAARDNRTILSAMDISRAEFFANFGHAINDLILGHRKH
                     LERKRNLEGTLNRKHSTSEPKARWVDGTPEYSLHIHGLRKLFPEALFIHIVRDVESVV
                     RSMLNFHRVAGTQLVTNEEQAYKYWLRTVDACLKAEQSYGPRVIYRLQYAALIDNPEA
                     AIRSLLDFLGEPYSAKCLEPLAQRINSSNVPVDFKSGDPATDRKVVEVARRLYAEIQQ
                     TPQPAEGSPAVADQLEAAFQEPYLKATRLQQELSEEIAKVQHYAAESEQYKLQLGRQE
                     RHYTGEIDVLKSQVARQEQHYTGEIDVLKSQVARQEQHYTGEITRQEQHYTAEIEEYK
                     SQIARLHKQLQDAGKLSRLLDNVENVAERLSNSRRWKLANVGAVIKAKLSHGKVSTGY
                     DPLDKIVAAYSRWRASHPEIGKLGEEIDALESQAIPKTPAIEPKKISV"
     gene            complement(1595..2890)
                     /locus_tag="VIS53_03425"
     CDS             complement(1595..2890)
                     /locus_tag="VIS53_03425"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5766868.1"
                     /translation="MNKTEPTGEITGKINANPNPLFFGQRCVISWETNDPAGAEIRVS
                     IGTDDEKLVTQGGPSGHVEIPWIKDSKVYEFRLYVASSPEVAIDSVKARRDIESAPTA
                     LREIADEVKRGNIEMSELSRFISAVMPRCLKATNRRESFLNWERHGFHVTPVHFYEPI
                     PDTQSLPETLWSQTSELVGIDMNDSIQLELLRSHFAKLRDEYHNLPVEPPPGQKRPFR
                     GVDALVAYCMIRHFQPELIIEVGSGWSSLVLGQAAAKNKNSALICIDPFPGDALRKGF
                     PGLRSLIEKKIQDIDLEFFSQLGSGDVLFIDSSHTVKIGGDVNYLFLEVLPRLSPGVI
                     VHVHDIFLPFDYRRDWVLDEFHFWTEQYILQAFLTFNSQFEVLLANSYLNHYHQQELK
                     AAFPGLSSWAGGSFWMRRKSIAGLRASQTADDSAAPKRR"
     gene            complement(2887..>6423)
                     /locus_tag="VIS53_03430"
     CDS             complement(2887..>6423)
                     /locus_tag="VIS53_03430"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5766869.1"
                     /translation="GLYLGPKDALMPPQADNPDGFWEHLGFVALNDELLEALGGAWDL
                     PPKANENLSDERLDPLRMKARLLIEGFHSAQIWGWKDPRNSLTLPFWEDLLPGLKTLI
                     IVRNPLEVAYSMRKRNGTSYAFGLRLWEIYNRRLIEAAGKPERLFTHYDLFFENAEKE
                     LQRIANFVGLPDAKIHSAAQLVATKRRHTHFAIDQLVDAGVSGEVVELYRALIAQASP
                     TKRKTSGTKSAGRAKSHETELLPGSVSRLDSFVPDRFTQIEHLYGELLAQTQARHKAE
                     MEKLSAHLAHSEELHKAQVKELTTHLAKTEAAHKTQVKELTTHLSKTEKQYNAQIEEI
                     SAHLAKTEADHKAQVEELTTHYTNEIEHLRQRIVEMNALLHHRSVNLAEDEKYIAELT
                     DRLRKQLHNTRRLSRLLDDTDEAARKLRTSRRWQLANPGATLKAKLAHKKAPAGFGHL
                     EKIVTAYSKWRKEHPEIKKIDDEIKAVQIATIPRSGQPETDGQAPVSAPREEAAASPV
                     GPVLPLTSICFPQHEEVDVSIIIPVFNQLEYTHACLASLQAVQEQPRFEVIVVDDCST
                     DDTPEVITQIPGVVYLRNDSNSGFIASCNTGAKAARGKYLVFLNNDTLVKAGWLTALL
                     DTFKEERRAGIVGSKLLYPDGRLQEAGGIIWQDASGWNYGKSDDPGKPEYNYLRDVDY
                     CSAAALMIPKALFESVGRFDSRYAPGYYEDTDLAFKVRQAGYRVLYQPLSEVVHYEGA
                     TGGTDISTGAKKHQEINRSTFAEVWSDELAQRPANGDVTFLQRPRTQSGKNILVIDHH
                     LPMPDRDSGSLRMFQILKILHRLGHRVTFLPDNLADMPPYTCELQKRGIQVVHHPYVK
                     RVRDYLISHGPMFDVVVLSRCDFARKHIADVRLHAPQSRIIFDTVDLHFLREQREAQL
                     TQDPDVRRKAQERQLLEDSLIKEADETWVVSPIEQQMLQENWPHKSIQLVSNIVDVTG
                     PVTPFALRRDWLFIGGFQHRPNIDAVLFFVEEIYPLVRDRLPDTKFYIIGDKAPPEIV
                     ALAADRIIVAGLQRDARSFFDSVRLSVAPLRFGAGIKGKINQSMAFGVPVVATSIAVE
                     GMNLADHEHVLVADEPQDFARALIELYESEELWKRLSQNGISKTQELYSTDAAREKLE
                     FLFSDRHLRSLEPAQSVAEPELVVAADGDYRQ"
BASE COUNT         1396 a         1739 c         1701 g         1587 t
ORIGIN      
        1 ctcatgagtt caagaaagtt gaagccggga aacaaatcaa gtccagagac gcttagggaa
       61 ctcgcggtga aataggagaa gttttgggtg caagcgcggc ttcggaactg ccatttcccg
      121 gatggcttaa acactgattt ttttaggttc gatagctggt gttttcggaa tggcttgaga
      181 ttcgagggca tcgatttcct cgccgagctt gccgatttca ggatgagaag cgcgccatcg
      241 cgaataagct gcaacaattt tatcgagagg atcgtaaccg gtggatactt taccgtgaga
      301 cagctttgcc ttaatcaccg ccccgacatt agccagtttc catcggcgcg aattactcag
      361 ccgctcggca acgttttcga cattgtcaag cagacgtgaa agctttcctg catcctgcag
      421 ctgtttgtgc aggcgggcaa tctgcgattt gtactcttcg atttcggcgg tataatgttg
      481 ctcctgtctc gtgatttcgc cggtataatg ttgctcctgt ctcgcgactt gggactttaa
      541 cacgtcgatt tcgccggtat aatgttgctc ctgtctcgcg acttgggact ttaacacatc
      601 gatttcgccg gtataatgcc gctcctgtct cccgagttgt aacttgtact gttcgctttc
      661 agcggcgtag tgctggacct tagcaatttc ctccgataac tcctgctgga gtctggtggc
      721 tttaaggtat ggctcctgga atgcggcttc cagttgatcg gccacagcag gtgagccctc
      781 ggctggctga ggagtttgtt ggatttcggc gtaaagtcgc cgcgctacct ccacgacttt
      841 gcgatccgtc gccggatcac cggatttaaa gtcaactggt acattggaac tattgatccg
      901 ctgcgcgagt ggctcgaggc atttggcact atatggctcg cccaagaaat cgagtaacga
      961 gcggattgca gcttctgggt tgtcgatcaa agcggcatat tgcaagcgat aaatgacacg
     1021 cggtccgtag ctctgttcgg ccttgaggca tgcatcaacc gtgcggagcc agtatttata
     1081 ggcctgttcc tcgttcgtca ccaactgagt cccagccacg cgatggaagt tgagcattga
     1141 gcgcacgacc gactcgacgt cgcgcacgat gtgaataaac aaagcctctg gaaaaagctt
     1201 acgcaaaccg tggatgtgca aagagtactc cggcgttcca tccacccatc gggcctttgg
     1261 ttcagacgtt gagtgcttcc tgttcaacgt tccctcgaga ttccgtttcc gctccaggtg
     1321 ttttcggtga cccagaatca aatcgttgat ggcatggccg aagtttgcga agaattcagc
     1381 acgcgagatg tccattgcgc tcaaaatcgt gcgattgtcg cgggcggcgc caacctggta
     1441 actcgatgcg atattaaccg cgaactcgcc catccagttg gactctggga ctggaaacat
     1501 gttgggatgc tgacccaggc accacgtaag aatgctagtt ccagatcgcg gcgagcccac
     1561 cacgaaaatt ggttgattaa tcttctcgtg catttcagcg tcttttggga gccgcactgt
     1621 catccgccgt ttgcgatgct cttaagccgg cgatggactt tcgtcgcatc cagaagctgc
     1681 cgcccgccca ggaagataaa ccaggaaaag cggctttgag ttcttgctga tggtaatggt
     1741 taaggtagct attagctaat aacacctcga actgcgagtt aaatgtcaga aatgcctgca
     1801 gaatatattg ctcggtccaa aagtgaaact catctagcac ccagtcacgc cggtagtcaa
     1861 acggtagaaa gatatcgtgc acgtgcacga ttactcccgg gctgagacgc ggcaatactt
     1921 ccaggaacag ataattgacg tcaccgccaa ttttgacggt atgggagctg tcgatgaaca
     1981 acacgtcgcc tgagccgagt tgtgagaaaa attccagatc gatgtcctgg attttttttt
     2041 caattaatga tcgcaagcca ggaaatcctt tgcgaagagc atcgcccgga aatgggtcga
     2101 tacagatcag agccgagttc ttgtttttgg cagcggcttg acccaacacg agagatgacc
     2161 agccgctacc gacctcaatg atcaactctg gctgaaagtg gcggatcatg cagtaagcga
     2221 ccaatgcatc gacgccacga aacggcctct tctgtccagg cggaggctct acgggaaggt
     2281 tgtgatattc gtcacggagc tttgcaaaat ggcttcgcag caactcgagt tgtatcgagt
     2341 cattcatgtc aatccccaca agttcgctgg tttggctcca cagcgtctca ggcaacgatt
     2401 gggtgtcggg aatcggctcg taaaaatgta ccggcgtcac atgaaacccg tgcctctccc
     2461 aattcaggaa cgactctcga cggttcgtgg ccttaagaca acgcggcatc acggccgaaa
     2521 tgaatcgcga aagctctgac atctcgatgt ttcctcgctt tacttcgtcc gcaatttcgc
     2581 gcagagccgt cggcgcggac tcaatgtcac gccttgcttt gaccgagtcg attgctacct
     2641 cggggctact agccacatac aggcgaaact catatacctt ggagtccttg atccacggaa
     2701 tttccacgtg gccagacggt cctccttgcg tcaccagctt ctcgtcatcg gtcccgattg
     2761 aaacacgtat ctccgctccg gccggatcgt tcgtctccca ggaaatcacg cagcgttgcc
     2821 caaaaaaaag cggattcggg ttcgcgttta tttttccggt aatctctccg gttggctccg
     2881 tcttattcac tgccggtaat caccatcagc tgctacgacg agctcgggtt ccgcaaccga
     2941 ctgcgccggc tccaagcttc tcaggtgccg atcgctgaag agaaattcca gtttttcgcg
     3001 tgcagcatcg gtagaataga gttcttgcgt tttgctaatc ccgttttgcg agagtcgctt
     3061 ccagagctct tccgattcgt agagctcaat caacgcgcgt gcaaaatcct gcggttcgtc
     3121 ggctacgaga acgtgttcat ggtcggcgag gttcattccc tccacggcaa ttgaggttgc
     3181 cacaacgggc acgccgaagg ccatgctttg attgatcttg cctttgatgc ccgccccaaa
     3241 acgcaaagga gccacagaga gccgcacgct gtcgaaaaac gagcgcgcgt cgcgttgcaa
     3301 tcccgccaca atgatcctgt cggccgccag cgcgacgatt tcagggggcg ccttgtcacc
     3361 gatgatatag aatttcgtat cgggcagacg gtcgcgaacg agcgggtaaa tctcctccac
     3421 gaaaaacagc accgcatcga tgttgggcct gtgctgaaag ccgccgatga aaagccagtc
     3481 ccgccgaagt gcaaacggcg tgactggccc agtgacgtcg acaatgttcg aaaccaattg
     3541 aatagacttg tgaggccaat tctcctggag catttgctgt tcgatggggc ttactaccca
     3601 cgtttcatct gcttccttta ttaaggaatc ttccagtagc tgtctctctt gtgctttccg
     3661 gcgcacatcg ggatcttgag tgagttgcgc ttcccgttgt tcgcgcagga aatgcaaatc
     3721 aacggtatca aaaatgatcc ggctctgtgg cgcgtgcaga cggacatctg caatgtgctt
     3781 gcgcgcaaaa tcgcaccggc ttagcaccac gacatcgaac ataggaccgt gcgaaatcag
     3841 ataatcgcgc actcttttca catatggatg atgaacaact tgaatcccgc gcttctgcag
     3901 ctcacaggtg taaggcggca tgtctgccag attatcaggg aggaaagtca cgcgatgacc
     3961 gagccggtgc agaattttga ggatttggaa catccgcagc gatcccgagt cgcggtcggg
     4021 catcggcaga tgatggtcga tgaccagaat gttcttgccc gactgagtcc tgggccgctg
     4081 cagaaacgtg acatctccgt tggctggtct ctgcgccagt tcatcactcc acacctctgc
     4141 gaaagttgag cgattaatct cctgatgctt cttcgcgccg gttgagatat cggtgccgcc
     4201 ggttgctccc tcgtaatgga ccacctcgct cagcggttgg tacagaactc tgtaaccagc
     4261 ttggcgaacc ttaaatgcca ggtcagtgtc ttcatagtag ccgggcgcgt aacgcgaatc
     4321 gaaccggcct acgctttcaa acagcgcttt gggaatcatc aacgctgccg ctgagcaata
     4381 atctacgtcg cgcaggtagt tgtattcggg cttacccgga tcatcagact tcccgtagtt
     4441 ccatcctgaa gcgtcttgcc agattatgcc ccctgcctcc tgcaaacggc catctggata
     4501 aaggagtttc gaaccgacaa tgcctgctcg ccgctcctcc ttgaaagtat cgagcaaagc
     4561 agttagccaa ccagccttca cgagtgtgtc gttattcagg aagaccaggt atttgccgcg
     4621 cgccgctttt gcacccgtgt tgcaggaagc gatgaacccg gaattgctgt cattacgcag
     4681 atagacaact ccaggtattt gcgtaatgac ttccggagtg tcgtcggtcg aacagtcatc
     4741 gaccacgatc acctcgaaac gcggctgctc ctgcacagct tgcaacgaag cgaggcaggc
     4801 atgcgtgtat tccaactggt taaaaaccgg aataatgatt gagacgtcga cttcctcgtg
     4861 ctgaggaaaa caaatcgacg tcagcggcaa aacggggccg actggcgagg ctgcggcctc
     4921 ttcgcgcggc gcgcttacag gtgcctgacc gtcagtttcc ggctgcccgc tcctcggaat
     4981 tgttgcgatt tgaaccgctt tgatttcatc atcgatcttt ttgatctcag ggtgctcctt
     5041 gcgccatttg gaataggcgg tcacaatctt ttcaaggtgc ccgaacccgg ccggtgcttt
     5101 tttgtgggcc aattttgctt ttaacgttgc gccgggattg gcgagctgcc accgacgaga
     5161 agttcgcagc ttgcgcgcgg cctcgtcggt gtcatcgagg aggcgcgaga gtcgtctggt
     5221 attgtgcagc tgtttgcgca accggtccgt caattccgcg atgtacttct cgtcttctgc
     5281 aagatttacg cttctatggt gaagcagagc gttcatctcc acgatccgct ggcgtaaatg
     5341 ctcgatttcg ttggtgtagt gcgtggtgag ttcctccact tgagccttgt ggtcggcttc
     5401 ggttttggcc agatgagcac tgatttcttc aatctgcgcg ttgtactgct tttctgtttt
     5461 agacagatgc gtggtgagtt ccttgacctg cgttttgtgg gcggcttcgg ttttagccag
     5521 atgggtcgtg agctccttga cctgggcttt gtgcagctct tcgctatggg caagatgcgc
     5581 gctgagtttc tccatttccg ctttgtgccg agcttgggtt tgtgcaagga gctcgccata
     5641 cagatgctcg atctgcgtga agcggtctgg aacgaacgaa tcgagccggc tcaccgagcc
     5701 gggaagcaac tcggtctcgt gtgacttcgc gcggcccgcg gattttgtcc cagacgtctt
     5761 ccttttggta ggtgaggctt gcgcgatcaa cgcgcgataa agctcaacaa cttctccgga
     5821 cacgcccgca tcaaccagtt ggtcaatagc gaagtgcgtg tgacgtcttt tcgttgccac
     5881 taattgtgcg gcgctatgaa ttttcgcatc aggcaatcca acaaaattcg caatccgctg
     5941 taactctttc tcggcgtttt caaagaacag atcgtaatga gtaaaaagcc gctcaggttt
     6001 gcccgccgct tcaatcaacc gccggttata gatttcccag agtcgcaggc caaatgcata
     6061 cgaggttccg ttgcgctttc gcatcgagta agctacctcc agcggattgc gcacgatgat
     6121 cagcgttttc aaacctggca ggaggtcttc ccagaagggc aacgtcaaac tattgcgggg
     6181 atccttccat ccccatatct gtgccgaatg aaagccctcg atcaggagcc gcgctttcat
     6241 gcgcagcgga tccagtcgtt cgtcggataa attctcgttg gcctttggcg gcaaatccca
     6301 cgcgccaccg agcgcttcga gtaactcgtc attcaacgcg acaaaaccca agtgttccca
     6361 gaagccatcc ggattgtccg cctgcggtgg catcaaagca tccttcggac ccaggtagag
     6421 ccc
//
LOCUS       DATDAJ010000147         5002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_899104, whole genome shotgun sequence.
ACCESSION   DATDAJ010000147 DATDAJ010000000
VERSION     DATDAJ010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_899104"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1663
                     /locus_tag="VIS53_03435"
     CDS             <1..1663
                     /locus_tag="VIS53_03435"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766870.1"
                     /translation="AVKTAKAAADAGVRIFTIGVGTPQGSLIPVTGDNGETSFVKDSA
                     GQVVKSKLDDNRLREVAEATGGFYLHLENGPRTMQQVQSEGLAKMQAAEMDVRLSRRP
                     IERYEWPLGAALIALALSILIPERKRVRERAHVPAPAGNAGRSVAGGPVKAAGAAVAV
                     LMLLCSSVFATVPGINAYQQGKFEDAYKEFQDTLKSHPQSRAEDELQFDSGTAAYKLK
                     DYNKALESFSQALLTPDTGLQTKGHYNLGNTLYQRGEMQKSDDKKLSDWTNALDHYEQ
                     TLKLDPQNKEAKDNYEYVKRKIDELKDKKEQQQQPSPSPTPPQKNKQDKQDQQQEQQN
                     QQNQDQQQQQKDQQQKDQKDQQQQQQQQQQQQQQQDQNQQDQKDQQQAQDQQSQDKSN
                     SEKDQKEQQQKDQSQAKNEPQKRQQQQPGQSPSPSPGAEKQQDNQPSPSPAEQQAGQS
                     PSPGEGENEMPSPSPGEGEEENGSPTPGESPQKKFAGEVKGAGGDNSQKPTDKNEQVA
                     AEAEQEKEGQMSERQALALLESMKDEEARVRLDERKVKRHVYNDW"
     gene            1715..3565
                     /locus_tag="VIS53_03440"
     CDS             1715..3565
                     /locus_tag="VIS53_03440"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HEY5766871.1"
                     /translation="MHRRILLAFFAVIAIAQIARADSPSVTAVLSSSEVTVGETVELQ
                     IKVTGPGDARPPEEISIDGLEIHSTGTSRQFEIHNFSTNSSVTYNYTILPLRAGRFTI
                     PPQTVHAGGKILRTPELALNVADAPGQQTKTRPGRSTQSQSTNTGDLIFAELIVPKKT
                     AYVGEIVPVQIKMAFDARVHPRLTEPPEITGQGFTSQKLQQSSQNLETINGRPFEVVT
                     FKTAIAAARAGKFEIGPVKAKAQVVVPRRRNAPRSRSPFDLFDLDDPFSDPFFSNPFA
                     QIGERRDIQISSDPVALEVKPLPPNAPPSFSGAIGSFTMATDAKPKSVQVGDPITVTT
                     TIAGRGNFDRVNAPLLEDDQGWHKYPPSSKFKQDDEVGISGTKTFEMVVSPNENKQSL
                     PVLAFSYFDPAKEQYVTLHSEPMAITVQGGAAAPAVAAQPPSSAPAARGRAPVPNLTK
                     PQDILYQLTEPSRTAGSFKPLYTRRGFWAAQSLPLAALLVFAGWKIRRARLDDREARR
                     IGALQHEAAELMHKLRRDDASPREYYAEASRVVRLKAALASRNRGVDPNAVDAETAAE
                     TFKLDTDSRDRLRRLFEQNDEWQYSGTHNGPGRISPENRRDVLELIENLK"
     gene            3562..4413
                     /locus_tag="VIS53_03445"
     CDS             3562..4413
                     /locus_tag="VIS53_03445"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766872.1"
                     /translation="MKPLQQASEHRPVACAPIGFVTRWIGSSGQHVRWAHRLKVYVPI
                     CALAWIVWAPSAFAQSDPQFAKANQEYAQGHFKEAIAGYEALVHAGQWNANLFYDLGN
                     AYFRTRDFGRAILNYERVLALDQHHPEATANLQIARDESRALELKPTRLERYFQFASI
                     NQYSIAAAVAFWLGIFGIVGLIFTRRRSAALLSLSILCLLLCAVAVWAIYTLDKGSKG
                     RALAIVTGTDVQARLATADTANSVLALPAGSEIKILSTRGDWIYAALPNDLRGWIQTK
                     NAEQVRL"
     gene            4581..>5002
                     /locus_tag="VIS53_03450"
     CDS             4581..>5002
                     /locus_tag="VIS53_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5766873.1"
                     /translation="MNPQMEIGTDEKALHMNLDSEKYGTFAEIGAGQEVARRFFRVGG
                     AAGTIAKTMSAYDMTFSDAIYGQADRYVSRVRLQTMLDHEYDLLIERLDGKFGAEKTF
                     FVFADTIAARNFKERNESHGWLGVRFQSQPQGQPSQII"
BASE COUNT         1328 a         1343 c         1397 g          934 t
ORIGIN      
        1 agcggtgaaa actgcgaaag ctgccgccga cgccggcgtg cgaattttca ctattggcgt
       61 cggaacgccg caaggttcat tgattcccgt aacgggcgac aacggcgaga caagcttcgt
      121 gaaggattcg gccgggcaag tcgtcaaatc aaaactggac gacaatcgtt tgcgcgaagt
      181 ggcggaggcg acgggcggat tctatctaca tttggaaaac ggaccgcgca cgatgcagca
      241 ggttcagagt gaaggcttgg caaaaatgca ggctgccgag atggatgtgc gtttgtcgcg
      301 ccggcccatt gaacgttacg agtggccgct cggtgccgcg ttgattgcac tcgccttgtc
      361 gatcctgatt cccgagcgga aacgcgtgcg cgagcgagcg catgttcctg cgcctgctgg
      421 caatgccggg cgcagcgtcg caggcggacc ggtcaaagct gcgggcgctg ccgtagctgt
      481 cttgatgttg ctgtgctcat ctgtgttcgc aacggtgccg ggaatcaatg cgtatcagca
      541 aggcaaattc gaagatgctt acaaggaatt tcaagacacg ctgaagtcgc atccgcaatc
      601 ccgcgccgaa gacgagctcc agttcgattc aggaacagcg gcttacaaac tgaaggatta
      661 caataaggcg ttggaatcat tcagtcaggc attgctcacg cctgataccg gtttgcagac
      721 caagggccac tacaatctcg gcaacacgct gtatcaacgc ggcgagatgc aaaaaagcga
      781 cgacaagaag ctaagcgact ggacaaatgc gctcgatcat tacgagcaaa ccctaaaact
      841 agatccacaa aacaaagagg cgaaggacaa ctacgaatac gtcaaaagga agatcgacga
      901 gttaaaagac aaaaaggaac agcaacaaca gccatcccct tccccaacgc caccgcaaaa
      961 gaacaaacaa gacaagcaag atcagcagca agaacagcag aaccaacaga accaggacca
     1021 gcagcaacaa cagaaagatc agcagcagaa agatcaaaaa gatcaacaac aacagcagca
     1081 gcagcaacaa cagcagcaac aacagcaaga ccagaatcaa caggatcaaa aagatcagca
     1141 gcaggcacaa gatcagcagt cgcaagacaa atcgaacagc gagaaagacc aaaaagaaca
     1201 acagcaaaag gaccagtccc aggcaaaaaa cgaaccgcaa aagagacagc agcaacagcc
     1261 cggccagagt ccgtctccat cgcccggcgc agaaaagcag caggacaatc agccttcgcc
     1321 ttcgccggca gaacaacagg ctggacaatc accaagtcca ggcgaaggag aaaacgaaat
     1381 gccgtcgccg tcaccgggtg aaggcgagga ggaaaacggc tcccccaccc ccggggaatc
     1441 gccgcaaaag aaatttgccg gcgaagtcaa aggcgcagga ggagataact cacaaaagcc
     1501 taccgataaa aacgagcaag tagcggcgga ggctgaacag gagaaagaag gtcagatgag
     1561 cgaacgacag gcgctggcgc tgcttgaatc gatgaaagat gaagaggcgc gagtccgact
     1621 tgatgaacgc aaagtaaagc gtcatgtcta taacgattgg taggtcggag cgtcggtagt
     1681 tgagagttga tggttaatag ttaacggaaa tttcatgcat cgccgaatct tactcgcgtt
     1741 tttcgccgta atcgcgatcg cacagattgc gcgtgccgat tcgcccagtg tcacggcagt
     1801 cctgagcagc tcggaggtaa ctgtcggtga aaccgtggag ctgcaaatca aggtgacggg
     1861 tcccggcgat gcgcggccgc ccgaagaaat ttcgatcgac ggtttagaga ttcattccac
     1921 cggaacgtcg cgacaattcg aaatacacaa cttctcgacc aactcgagcg tgacatacaa
     1981 ctacacgatc ctgccgctca gagcaggacg gttcacgatt ccgccacaaa cagttcacgc
     2041 cggcgggaag atcctcagga cgccggaact cgcgttaaac gtcgctgacg cgccgggtca
     2101 acagacgaag acacgacctg gtcgcagcac tcagagccag tcgactaaca caggcgacct
     2161 gatcttcgct gaattgatcg tgcccaagaa gaccgcgtac gtcggcgaga ttgttccggt
     2221 gcagattaaa atggcatttg atgcgcgtgt tcatccccgg ctgaccgagc cgcctgagat
     2281 taccggtcaa ggctttacct cacagaaatt gcagcagtcg tcacaaaatt tggagactat
     2341 caacggcagg cctttcgaag tggtgacgtt taaaaccgcg attgcggcgg cgcgggcagg
     2401 gaaatttgaa atcggacctg tcaaggcaaa ggcgcaggta gtcgtcccgc gaagacgaaa
     2461 cgcgccgcgt tcgcgttcgc ccttcgattt attcgatctc gatgatccgt tttcggatcc
     2521 atttttctcg aacccatttg cacagattgg cgaacgtcgc gacatccaga tcagcagtga
     2581 ccctgtggcg cttgaagtaa aaccgctgcc accaaatgcg ccgcccagtt tctcaggagc
     2641 aattggaagc tttaccatgg caaccgatgc caagccgaag agcgtgcagg taggtgatcc
     2701 gatcacagtc acaacaacaa tcgccgggcg cggcaatttc gatcgcgtga atgcgccatt
     2761 gctcgaggac gatcagggct ggcataaata tccgccatct tccaagttca aacaggacga
     2821 tgaagttggc attagcggca caaagacctt cgagatggtg gtttcgccta acgagaacaa
     2881 gcaaagtctg ccagtgctcg cattttcata tttcgatccg gcgaaagaac aatacgtgac
     2941 gttgcacagc gaaccgatgg caatcactgt ccagggcggt gcagctgcgc cggccgtagc
     3001 cgcccagcca ccgtcgtcag cgccggctgc ccgggggcgc gctccggttc cgaatttaac
     3061 caagcctcag gacattcttt atcaacttac cgagccatcg cgaacggctg gatcattcaa
     3121 accgctttat acgcgtcgcg gtttctgggc ggcacaatcg ctgccgctgg cggcgctgct
     3181 cgtgttcgcg ggttggaaga ttcggcgagc aagattggac gatcgcgaag cacgccgcat
     3241 tggtgcgctg caacatgaag cagccgaact gatgcacaag ttgcgccgtg atgatgcgtc
     3301 cccgcgagaa tattatgccg aagcctcgcg agttgttcga ttgaaagccg cgctcgcctc
     3361 gcggaaccgc ggcgtcgacc caaatgccgt cgacgcggaa accgcagcgg aaactttcaa
     3421 gcttgatact gattcgcgcg accggcttcg ccgtttattc gagcaaaacg acgagtggca
     3481 atacagcgga acgcacaacg gcccgggaag aatctctccg gaaaaccgac gcgatgtatt
     3541 ggagctgatt gaaaatttga aatgaaacct ttgcaacaag cgtcggaaca taggcctgtg
     3601 gcctgtgcgc ccatcgggtt tgtaacccgc tggatcggaa gcagcggaca acatgtccgc
     3661 tgggcgcaca gactaaaagt ctatgttcca atctgcgcgc tcgcgtggat cgtttgggca
     3721 ccatccgcgt ttgcgcaatc ggatccgcaa tttgcaaaag cgaaccagga atacgcgcag
     3781 ggtcatttca aagaagcgat agccggttat gaggcgctgg ttcacgcagg tcagtggaac
     3841 gcaaatctgt tttacgatct gggaaacgcc tattttcgca cgcgcgattt tggccgcgcc
     3901 attctgaatt acgaacgcgt tctcgcgttg gatcagcatc atccggaggc aaccgctaat
     3961 ttgcagattg cccgtgacga atcgcgcgcg ctggagctga aaccgaccag attggagcgt
     4021 tactttcaat tcgcgagcat caatcagtac agcatcgcgg cggcggttgc tttctggctg
     4081 ggcatttttg gaattgttgg cctcattttc acgcgtcgcc gatccgctgc gttgctgtca
     4141 ttatcgattt tgtgcctact tttgtgcgct gtagctgtct gggcgattta cacactcgac
     4201 aaaggaagca aaggccgggc gctcgccata gtgactggta cggacgtcca ggcacgtctt
     4261 gccacagcgg acaccgcaaa cagcgttctg gcgttgccgg ctggcagcga aatcaaaatt
     4321 ctaagcacgc gcggcgattg gatatacgcc gcattgccga atgacctgcg cggctggatt
     4381 cagacgaaga acgccgagca agtgcggctg tagaagcgca aggggcaaca cttaaggagc
     4441 agcggtctca gtccgccgac attcaaggaa tgacggtttc ccaaccgtca aatttgaaat
     4501 cgaccccgaa agcgttcggg gtcgctcctt gccctattac acgatttgcg acggccgtga
     4561 atcgccgtta gagaaattat atgaatccgc agatggagat cggcaccgac gagaaggccc
     4621 tccatatgaa tttggattca gagaagtatg gtacgttcgc tgaaattggc gcgggacagg
     4681 aggtagcgcg cagattcttt cgcgtgggcg gcgcagccgg cacaatcgcc aagaccatgt
     4741 ccgcctatga catgactttc agtgacgcca tttacgggca ggccgaccgc tatgttagtc
     4801 gtgtgcggct ccagacaatg ctcgatcatg aatacgatct tctgatcgaa cggctggatg
     4861 gaaaattcgg ggccgagaaa acgttctttg tcttcgccga tacaattgcg gcgcgcaatt
     4921 tcaaagaacg caatgagtcg catggctggt tgggtgtgcg gtttcagtcc caaccccagg
     4981 ggcaaccaag ccagatcatt at
//
LOCUS       DATDAJ010000148         5754 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_903584, whole genome shotgun sequence.
ACCESSION   DATDAJ010000148 DATDAJ010000000
VERSION     DATDAJ010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5754
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903584"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VIS53_03455"
     CDS             complement(<1..825)
                     /locus_tag="VIS53_03455"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5766874.1"
                     /translation="MLTVSQLSKSFAGRALFDDVSLQVNRGDRIGLVGPNGAGKSTLF
                     ALLLGDVSPDKGTIAIEKNATIGFLPQETTAAGDETVLELALAVSPELVHAQKVIKEH
                     EAAVAGIADPGREAAYHDALHVFDEHGGWELEPKAKRVLAGLAFRETDFHRPARALSG
                     GWIMRAHLARLLVMEPDLLLLDEPTNHLDLESLQWFQEYLRSYPGAIVMISHDREFLN
                     QLVGSIVEIAHSKLVRYRGNWDSYVEQRVAREEQQLAAYKNQQKEIASLQLFADRFR"
     gene            1060..1380
                     /locus_tag="VIS53_03460"
     CDS             1060..1380
                     /locus_tag="VIS53_03460"
                     /inference="COORDINATES: protein motif:HMM:TIGR01439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766875.1"
                     /translation="MSKTNLDSVWFTTKGQVVIPAWLRRQFDIEDGTRAVVQATPEGI
                     LLKPMTAPSIRRLRGLIKRKPGEEPFNQWWAKYKTEEKQLEEAKYARSTRRVRQSRSA
                     KTTA"
     gene            1325..1747
                     /locus_tag="VIS53_03465"
     CDS             1325..1747
                     /locus_tag="VIS53_03465"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEY5766876.1"
                     /translation="MPAPPVVFDSHALLKLLRDEPGAEEVEKILIEAARRDERAHMTE
                     VNYAEVQCIVRRKDGEAAWQTIARELIAAPIQFHVADRVLADSAADFKTRFKISLADA
                     FAAALAKKQNADLVTGDPEFKPLEKEIGISWLKGRAAR"
     gene            1990..2250
                     /locus_tag="VIS53_03470"
     CDS             1990..2250
                     /locus_tag="VIS53_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY5766877.1"
                     /translation="MIHLIWYIIVGLIAGLIAKSVLHVHMTIFWTIVLGIIGSIIGGA
                     VTHMFSPPSGRFHPAGIIFSTLGAILVLYLCLKLHIRFPRVL"
     gene            complement(2602..3777)
                     /locus_tag="VIS53_03475"
     CDS             complement(2602..3777)
                     /locus_tag="VIS53_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766878.1"
                     /translation="MQTVLNFLRLSVFSLVVISTSSLFGEHPTSIAIVGGQGDAPYAA
                     IVRSDRSVMELAGLPAEGLTYRVAMNSSRRGIIGGTEGVNAYAALVSHKGELTPISGL
                     MAPGEIYTVAIDESGKGLVGGGHADSSVPYAALISSKGEAKSLSLPPSGLIYSVVVGF
                     FQNGIIGGKGPSNSAYAAFVSHKGVVEPLAGLPAIGAIFWISVSNSHNALIGGQDNES
                     VYAAFVSRSGVVTPIANLPQGINYSVAINNAGAGLMGGTSQSQPYAAFVSPQGVATPI
                     QNLPTTAGIIYNVAINASGTGLIAGLVASHPYGAFVAANGVLTPLQGLPTAEGFLDGI
                     ALDRSGYALVGGESDGAPFLALAAPNGQLTYLNDLPENGAINSISSTRLDQIISMYR"
     gene            4040..5095
                     /locus_tag="VIS53_03480"
     CDS             4040..5095
                     /locus_tag="VIS53_03480"
                     /inference="COORDINATES: protein motif:HMM:NF012335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY5766879.1"
                     /translation="MTSDKPRTMKVLVSQDNGFRVQEISRPLLSEGEMLLQVTACGVC
                     FSDVHKIRFQRMEDPVVLGHEVAGRVVESSAAKFKVGDRVVVAHHVPCGRCHYCCHGN
                     ISMCAEFKKTNLDPGGFAEFVRVPAEHVESVAFPIPDSLTDNEASFMEPLACCVRAVK
                     RAGIQPSDVVVVVGLGSIGLLFMQLIGHAGGKCIGLDLDPARRELADSLGSTATFAGS
                     EPDFEESLASMTNGRGADAVLLTAANPPLVPTALSWLRAGGTCLVFASLHPDSDVTLD
                     WNQLYYREINIVTSYSASPDDLREALQLLANGSVRVSLMTGHTFPLEGFSEALAAIES
                     RTILKAIMTPSPVTSDQ"
     gene            5100..>5754
                     /locus_tag="VIS53_03485"
     CDS             5100..>5754
                     /locus_tag="VIS53_03485"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY5766880.1"
                     /translation="MNALMKAVMFYAPGDLRLMETPIPSAGPGEVVVKIETALTCGTD
                     FKAYRQGHPVLLAHTPSPFGHEMAGIISEVGAGVTWLREGERVVVLNSAPCDDCFFCE
                     QGITELCENLELLNGAYAEYIRVPPQITRHNVHPLPEHLSFAEAALVEPFACALHAVD
                     KMRLKPSETIAVIGAGNMARLLICALKAAGARVLVIGRNAERLRLATAAGADDVIDLS
                     "
BASE COUNT         1281 a         1551 c         1614 g         1308 t
ORIGIN      
        1 gcgaaatcga tcggcaaaca attgcagcga tgcgatttct ttctgctgat tcttgtaagc
       61 ggcgagctgt tgttcttcgc gtgccactcg ctgctcaaca taactgtccc agttgccccg
      121 ataacgcacc agtttcgagt gcgcgatctc gacgatgctg ccgacaagct gattcaaaaa
      181 ttcgcggtcg tgcgagatca tgacaatcgc gcccggatag cttcgcagat actcctggaa
      241 ccattgaagc gattcgagat cgagatgatt cgtcggttcg tcgagcagaa gaaggtcggg
      301 ttccatcacc agcaaccgcg cgagatgagc gcgcatgatc cagccgccac ttaaagcgcg
      361 cgccgggcgg tggaaatcag tttcgcgaaa cgcgagtccc gccaggaccc gttttgcttt
      421 tggttcgagt tcccagccgc cgtgctcatc gaaaacatgg agcgcatcgt gataggccgc
      481 ttcgcgaccg ggatcagcga tcccggctac agctgcttcg tgctccttga tcactttctg
      541 cgcgtgcaca agctcgggcg aaacggcgag agcaagttcg aggacggttt cgtctccggc
      601 agcggtggtt tcctgcggaa gaaagccgat cgttgcgttc ttctcgatcg caatcgttcc
      661 cttatcgggt gagacatcac cgagcagaag cgcaaacaac gttgatttgc cagccccatt
      721 ggggccaacc aatccaatcc ggtcgccgcg attgacctgg agcgatacgt cgtcgaagag
      781 cgcccggccg gcgaaagatt ttgaaagttg ggaaacggtc agcattgcag aaagcgcgca
      841 gtgtcccctt gttccatgcc cggcgcaact cctcgccctc aacatctcaa ctcctacaca
      901 acgccggttt ggctcctcct cgggttggta gtgtcgaggg aggcgacacg cgtgtgattt
      961 tattcctgag ttctctccaa agctatcatc ggactttgcg gcgtccatcc gatattatat
     1021 ccattgacgg aatgttgttt taatatcaga attcaaactg tgagtaagac aaacttggat
     1081 tcggtatggt ttaccaccaa gggccaggtc gtgattccgg cgtggctgcg gcggcagttc
     1141 gacatcgagg acgggacaag agccgtagtg caggccacgc ccgaaggaat tctcttaaaa
     1201 ccgatgacgg ctcccagcat ccggcgatta cgcggcctga taaagcgtaa gcccggagaa
     1261 gaacctttta atcagtggtg ggcaaaatac aaaactgaag aaaagcaatt ggaggaagcg
     1321 aagtatgccc gctccacccg tcgtgttcga cagtcacgct ctgctaaaac tactgcgtga
     1381 cgaacctggt gcagaagagg tcgagaagat tctcatagaa gctgctcgtc gtgatgagcg
     1441 cgcgcatatg accgaggtga actatgccga agtccaatgc atcgtgcgac gcaaggatgg
     1501 agaagcggcg tggcagacca ttgcccgtga gctgatcgca gcgccgattc aattccatgt
     1561 cgccgatcgg gtccttgccg acagcgctgc cgattttaag acgcggttca aaatcagttt
     1621 ggcggacgct tttgccgcag cactggcgaa aaaacaaaac gctgacctcg tgaccggcga
     1681 cccggaattc aagccactgg aaaaggaaat cgggattagt tggctaaaag gccgcgcagc
     1741 tcgataaagt gaacgagcga atccgattcg cctgcacctc gcggcattaa cttctgaaca
     1801 gtctgtcgtg gctgtcacgc cgcctgctcg cgaatgcctt cggagttggc gttgagcgtt
     1861 ggacgttggg cgttgagcgt tgggcgtttt ccccgagtaa tcttctcaac tcgagaaaag
     1921 tctggccaat tgtgaaacgt ctgaccatgc tcagccacct ttctgcaggc aaacgacgga
     1981 ggaaaaatta tgattcactt aatctggtac attattgtcg ggttgatcgc ggggctcatc
     2041 gcgaaatcgg tgttgcacgt gcacatgacg attttttgga cgatcgtact cggcatcatc
     2101 ggatcgatca tcggcggcgc ggttacccac atgttttcgc cgccgtccgg acgatttcat
     2161 cccgctggta tcattttttc cacgcttggc gcgatcttgg tcctctacct ttgccttaag
     2221 ctgcatatcc gtttcccgcg tgttctctga tcaggcgcgg gctcacacac gaaatgcatt
     2281 tggtgtgtga gccgccagct tcgctggccg agccgtaggc gattgcgcgg gtaggggcgg
     2341 tctgtctcag ccgccttgag cgcagcgaac agctacatta gtttcctcta cgcctgtgca
     2401 attgttgctg ccggcctcat aacattggcc gccgtgctca ccctgcgagc cgcagaatac
     2461 ttcacgctcc gctgactctt ttgtactgcc gtagaggata ttaatgtagg aaaaaggaaa
     2521 actgtagccg tcgtcgttga ctgcggcgct gttcattcgg cgttgggcgt tgggcgttct
     2581 ctgctcccga atatttcaga attaccggta catagagata atttgatcga gtctggtgct
     2641 ggaaattgaa ttaatcgcgc cattttccgg gagatcgttc agataggtca attgcccgtt
     2701 gggagcagcg agagccaaaa aaggagcgcc gtcagattcc cctcccacga gagcatatcc
     2761 ggaacgatca agcgcgatcc catccaaaaa tccctcggct gtgggaaggc cttgcagagg
     2821 ggtcaagaca ccgttggcgg cgacgaacgc tccgtagggg tgtgatgcga cgagcccagc
     2881 aatcagtccc gtgccggaag cattgattgc gacattatag ataattcccg cggtcgttgg
     2941 cagattttgt ataggtgtgg caacgccctg aggtgatacg aaagcggcat aaggttgaga
     3001 ctgagaggtg cctcccatga ggcccgctcc ggcattattg atcgcaacgc tgtaattaat
     3061 tccttgaggc agattggcaa tcggcgtcac gacccctgag cgagaaacga aggccgcgta
     3121 caccgactca ttgtcttgcc ctccgattag agcgttgtgc gaattactca cggaaatcca
     3181 aaaaatggct ccaatcgcag gcaaccctgc cagaggttcc accacacctt tgtgtgaaac
     3241 aaaagccgca taggcagaat ttgacggacc ttttcctcca atgattccat tttggaaaaa
     3301 gccgactaca acgctataaa tcagtccact cggaggcaac gagagcgatt ttgcctcacc
     3361 cttggaggag atcagcgcgg cgtagggaac actggaatcg gcatgccctc ctccaacaag
     3421 tccttttccg gactcatcga tggcaaccgt atagatctct ccgggtgcca tgagtccgct
     3481 tatcggcgtt aactctcctt tgtgagagac caacgccgca taggcattca cgccttcggt
     3541 cccgccaatg attccacggc gagaggagtt catggcaact cgataagtaa gtccttcagc
     3601 cggcagccca gccaattcca tcacagatcg atctgacctg acaatagccg catacggagc
     3661 atctccctgg cctccaacaa ttgcgattga ggttggatgt tctccgaaca gagaggaggt
     3721 ggaaatgaca acgagactaa aaacggacaa tcttagaaag ttcaaaacgg tttgcatacg
     3781 tcaccttacc aagaaatttc aggagtccca tccataaagc acgttccgac gaccgtgtgg
     3841 acctccaccc aacggattat cgaatcagga agtcaggaaa aaaatctgta gccgacggtt
     3901 ctgaccgcgg cgctgtttca ttcggcgttg gatgttggag gttgggcgtt cggcgttatc
     3961 cgcttccgaa ttcttcaacc cgataccctc gatgaaggcg cttgtttcgc aaagccgtgg
     4021 aagaagttat tagtgacaag tgaccagtga caagccacgg acgatgaaag tgctggtttc
     4081 tcaagataac ggattccgcg tgcaggagat ttcgcggcct ttgctaagcg agggcgagat
     4141 gctcctccaa gtcacagcct gcggagtctg cttctccgat gttcacaaga ttcgttttca
     4201 acgaatggaa gaccccgtcg tcctgggtca tgaagtagcc ggccgggtgg tggaatcgag
     4261 cgctgcgaaa tttaaggtgg gcgatcgcgt ggtcgtagcg catcacgttc cgtgtggccg
     4321 atgtcattac tgttgccatg gaaatatttc gatgtgcgcg gagttcaaaa aaaccaatct
     4381 cgatccaggt ggattcgcgg agtttgtgcg tgtgccggca gagcatgtgg agagcgttgc
     4441 ctttccaatt ccggatagtc tgactgacaa cgaagcttct ttcatggagc cgttggcttg
     4501 ctgcgtgcgc gcggtgaagc gcgctggaat ccaaccgtcg gatgtcgtcg ttgtggttgg
     4561 tttaggttcg atcggtctgc tattcatgca attgatcggc cacgccggtg gtaagtgtat
     4621 cggcctcgat ctcgacccag ctcgccgcga gttagcagac tcgttaggct cgaccgcaac
     4681 atttgccggc tccgaacccg atttcgaaga atcgctcgcc tcgatgacga acggtcgtgg
     4741 cgctgatgcg gtcttgctaa ctgcggcaaa tccgccactt gttccgacgg cgttgtcgtg
     4801 gttacgcgca ggcgggacgt gcctcgtctt tgccagtctc catcccgact ccgatgtcac
     4861 actcgattgg aatcagctct attaccgtga aatcaatatc gtgacgtcgt attcagcttc
     4921 gccggatgat ctgcgcgaag cgctgcaatt gctggcgaat ggttctgtgc gcgtatcgct
     4981 aatgaccgga cacacttttc cgttggaggg gttctcggag gcgctggctg cgatcgaaag
     5041 ccgcacgatt ctcaaggcga tcatgactcc atcgccagtg accagtgacc agtgaccaga
     5101 tgaatgcgct gatgaaagcg gtgatgttct acgcacctgg cgacttgcgt ttgatggaaa
     5161 cgccaattcc ttcagccggc cccggcgaag tcgtcgtgaa gattgagacg gcgcttacct
     5221 gcggcaccga cttcaaagcc tatcgacaag gtcacccggt tttgctggca cacacgccat
     5281 cgccattcgg acatgagatg gcgggaatca ttagcgaagt cggcgcagga gtgacctggc
     5341 tgcgggaagg agagcgagtc gtcgtgctga actcagcgcc ctgcgacgat tgtttcttct
     5401 gcgaacaagg catcacggaa ctgtgcgaaa atctcgagct gctcaacggc gcttatgccg
     5461 aatacattcg cgtcccgccg cagatcacgc ggcacaacgt tcatccgtta ccggaacatt
     5521 tgagtttcgc tgaggccgcg ctggtcgaac cgttcgcgtg cgctttgcat gcggtcgata
     5581 agatgcggct caaaccgagc gaaaccattg ccgtgatcgg cgccggcaac atggcgcggc
     5641 ttttaatttg cgcgctcaaa gcggcgggtg cgcgcgtgct tgtgattggt cgaaacgcgg
     5701 aacggcttcg cctcgctact gcggccggtg cggacgacgt gatcgatctt agcc
//
LOCUS       DATDAJ010000149         7665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_914819, whole genome shotgun sequence.
ACCESSION   DATDAJ010000149 DATDAJ010000000
VERSION     DATDAJ010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7665
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_914819"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="VIS53_03490"
     CDS             <1..238
                     /locus_tag="VIS53_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766881.1"
                     /translation="ERAKSSSVEKRVRASTSEFRALQISQRPAFVIDTEIGDRAIFSG
                     VVKFEPLAATVDSMLDDAAAYAAHKAHFGDPPAK"
     gene            486..1058
                     /gene="infC"
                     /locus_tag="VIS53_03495"
     CDS             486..1058
                     /gene="infC"
                     /locus_tag="VIS53_03495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEY5766882.1"
                     /translation="MRVNGRIRAREVRVIVGSTGEQLGVMRLTDALRKAQTLGQDLVE
                     IAPTANPPVCKIVDFGKFRYDISKHSKDKKPSGSKLKEIKFRVNIDEHDYLTKVRHAE
                     EFLDRGNKVRVQLQFRGREMAHQELGTHLVEKVRDDLSSMSQVETDPKIAGRNITMTL
                     APLPANRRKRKFTAPRTDEESEEAPALTEP"
     gene            complement(1106..1744)
                     /locus_tag="VIS53_03500"
     CDS             complement(1106..1744)
                     /locus_tag="VIS53_03500"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766883.1"
                     /translation="MNRSFAFILVTSLAVCGSQVCQGAEKKNPEANKLAREGVEAAKK
                     QDFDKAVDLLKKATAMDQKYGDELSAVYQQRGYAAANDQKYGDAINDYNEALKLTPQQ
                     APRIHEQRAAVEMKIQDYDKALGDYSELIKLKPNEIKYVNYRAYIYELKNDLQNSLAD
                     NEKILKLDPNNQDAKTRKQRLEQKIAERTPLTPPPRSPTPSPAHSPAGKKKP"
     gene            complement(1823..2677)
                     /locus_tag="VIS53_03505"
     CDS             complement(1823..2677)
                     /locus_tag="VIS53_03505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEY5766884.1"
                     /translation="MLTILFLGDIVGQSGRAAVIARLPDLKAKYALDFVIVNGENAAG
                     GRGITGKITIDLLRAGVSVITSGDHIWDQKEILSFIDTEPRLLRPLNYPEGTPGSGSI
                     ILETAKGKIGVINVQGRTFMQPILDNPFRAVEAAVTKMRSETPNIIVDAHGETTSEKI
                     AFGRFLDGKVSAVIGTHTHVQTADEQIFPGGTAFLCDAGMCGPVNSILGRAVDPILNR
                     FISNLPSSFPVAGGEVRLRGALVQIDETTGRAVDITRVDEPGPSSSVTSSPEPKIDIE
                     NAPSPEQT"
     gene            2693..4066
                     /locus_tag="VIS53_03510"
     CDS             2693..4066
                     /locus_tag="VIS53_03510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766885.1"
                     /translation="MNRYIVTSDLRFNDLSVHRSSAAKRFAWYAIAWRTRVVRTSTCL
                     FIAIFAAGLQAAENISVLGNKPQWAVLEHYQQTITRDEFAHLINEVFGTHGFAPDLIE
                     IKDDTARILMNRDAQKSFTLQFAASDSARKRVPRLWRPVNSLSPTKREKPLSGLKIAL
                     DPGHLGGEWAKMEERWFQFADSKPIQEGDLTLRVARLLATRLRDLGAKVWFVRNDNEP
                     ITAKRPDDFRELARKILIKNGVPQPRPDVLDSTDPEKEKTIRWQSEILFYRYSEIRRR
                     AALVNFKLHPDLVLCLHFNAEGWGDPTSPMLTDANHLHLLVNGSYLAEELEFDDERFE
                     MVRRLLSRAYDEELPLADTIALAMSRETGLPPYAYPTTNSTTKVGSSGYVYARNLLAT
                     RLYRCPVVYCEPYVMNSKDVFARIQAGDYEGTRNINGVERKSIFREYADSVADGLVEY
                     YSKAREL"
     gene            complement(4107..5183)
                     /gene="aroB"
                     /locus_tag="VIS53_03515"
     CDS             complement(4107..5183)
                     /gene="aroB"
                     /locus_tag="VIS53_03515"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY5766886.1"
                     /translation="MISVRAGIGRILIGKQLLPRTGKRCQALGVSGQCVLISDRNVAP
                     LFADRVKKGLVSAGFRPTLITIPAGEKSKTLEQAGAICDRMIAAGLGRTSCVVGLGGG
                     VVGDISGFVAAIYHRGIPHVQIPTTLLAMVDSSIGGKTGVDTRAGKNLIGAFHEPSLV
                     IDDLDVLKTLPRRQFNQGFAEIIKHAIIADAEMFRILQSWDASSSLASGALALQSLIE
                     RNIRIKSRIVAQDERDQTGHRALLNFGHTVGHAIERAGNYRKFLHGEAVSLGIVAACA
                     ISAKRAGLPADQRAAIVDLLERFELPTRLPPKFPRKKILEAVNFDKKFESGKVRFVVT
                     PRIGAASVTDNVTLEDILEAIENL"
     gene            complement(5212..5499)
                     /locus_tag="VIS53_03520"
     CDS             complement(5212..5499)
                     /locus_tag="VIS53_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766887.1"
                     /translation="MQNHLSSNLDLAVPFRFRFAPKRNIMRCYSISMDKNSSRPVTRA
                     FTLIELLVVFAAIDILLGIAVPPLNSAYERAKITKDMSNLRQIGLGMQSKH"
     gene            5609..5947
                     /locus_tag="VIS53_03525"
     CDS             5609..5947
                     /locus_tag="VIS53_03525"
                     /inference="COORDINATES: protein motif:HMM:NF021221.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEY5766888.1"
                     /translation="MAAALACIPLIGGIIFYIVEKHDSFVRFYAMQSIIFGGAWLLFN
                     IVSRILFLILWSIPAIGGILVFFWGIIQALVHIAFLVVWIVATVKAFTGVRWDIPYIG
                     PVARRQEGAV"
     gene            complement(6012..7139)
                     /gene="holA"
                     /locus_tag="VIS53_03530"
     CDS             complement(6012..7139)
                     /gene="holA"
                     /locus_tag="VIS53_03530"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEY5766889.1"
                     /translation="MPKTKTKSETANIYAVVGSDESEVKHVAAELAQKLVPDDAGDFG
                     LEVIDGVADNADQAAGRIRSAIEALQTLPFFGSTKVVWLKNANFLGDDVKARSNAVQT
                     ALEELSALIDSGVGDGVMLLISATEVDKRRSFYKTLVKRAEVQVFDRLDSARAGWEEQ
                     ATEIVLGRAKKRKLEFDEAALELFVLLTGGDTRQIDNELEKIDTFLGEDRAVRIELVR
                     ELVPLSRAGVIFELSNALSVRDLELALTLVRRLLEQGEKAAGILLAAIVPTIRNLLLA
                     KDLMEQHGIRRPHSPFQFIAAMKRLPAKATEHLPRKKDGSINAYGLGIAAQHANQFES
                     SELIESMRACLDANVKLVTTQLDHELILTEVVVKLLQQRSS"
     gene            complement(7279..>7665)
                     /locus_tag="VIS53_03535"
     CDS             complement(7279..>7665)
                     /locus_tag="VIS53_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEY5766890.1"
                     /translation="DTITQSMEALMSISEYRRAKQMEYNETHGITPQTVRRAVQESLH
                     TIFRGREVESSVIRETGGDFNLSELLRELEQEMQEASANLEFERAALLRDQIMEVKSG
                     SGLAKIEPKRRPIRYSRNAGRRRSRV"
BASE COUNT         1669 a         2058 c         2100 g         1838 t
ORIGIN      
        1 cgagcgcgcg aaatcgtcgt cggttgagaa gcgggttcga gcatcgacct ccgaattccg
       61 cgcattacag atctcgcaac gacccgcatt cgttattgat actgagatcg gggatcgcgc
      121 cattttttcc ggagtggtca aattcgagcc attggcagcg acagtcgatt caatgctcga
      181 cgatgcggct gcgtacgcgg cgcacaaagc gcactttggc gacccgccgg caaagtgatc
      241 tcccggagat cgatacctaa acgtcacgag tttgaccttg ccagtgcaca attgttgcct
      301 acaacttctc ttctgcttgc gacctttaat gcgagcactt cgttgcggtg aatcgcagcc
      361 gtggcgaaga aagagtgacc tggcgtttgc gaatgctgac gcccggaatt gcgataaatg
      421 taacacggcg gcgcggcgca ctcccgcttc gccgttgagg agattgatct aatctgcaac
      481 cacaaattcg tgtaaacggt cggattcgcg ctcgcgaagt ccgagtcatt gtagggtcca
      541 ccggcgaaca gctcggcgtc atgagactaa ccgacgcctt gcgtaaggct caaactctcg
      601 gccaggattt ggtcgaaatc gcgcccacgg ccaatccgcc tgtgtgcaag attgtcgatt
      661 tcggaaagtt ccgatacgac atttcaaaac actcgaaaga taaaaagccg tccggctcga
      721 aactgaagga aatcaagttc cgcgttaaca tcgacgagca cgattatcta acgaaagtcc
      781 ggcacgccga ggaattcctg gatcgcggca acaaggtgcg tgttcagttg caattccgcg
      841 gccgcgaaat ggcgcaccag gagcttggga ctcatctggt ggagaaagtt cgcgacgatc
      901 tttccagcat gtcgcaggtg gaaactgacc cgaagatcgc cggtaggaat atcaccatga
      961 ccctggcgcc tttgccggcg aaccgccgga aacgaaaatt cacagcgccg agaacagatg
     1021 aggaaagcga agaagctcct gcattaaccg agccctaaag tgacccgctt ccaaggcgac
     1081 gcagtgggcc aggtgtcgag agcgcttagg gcttcttttt gcctgctggt gaatgggcag
     1141 gcgaaggcgt gggcgatcgc ggtggaggag taagcggcgt cctttcggca atcttttgtt
     1201 caagccgttg cttgcgcgtc ttcgcatcct gattgttggg atccagcttc aaaatctttt
     1261 cgttgtcggc cagcgaattt tgaagatcgt tttttagctc gtagatgtac gcgcgataat
     1321 tgacgtattt gatctcgttt ggcttcaatt tgataagttc ggaatagtct ccgagagctt
     1381 tatcgtagtc ctgtatcttc atttcgaccg ccgcacgctg ctcatgaatc cggggcgctt
     1441 gttgcggagt cagtttaagg gcttcgttgt agtcgttgat ggcgtccccg tatttctggt
     1501 cgtttgcagc cgcatatccg cgttgttgat aaactgccga gagctcatcc ccgtattttt
     1561 ggtccatggc agtcgccttc ttaagcaggt cgaccgcttt gtcgaagtct tgctttttag
     1621 cggcctcaac gccctcgcgg gccaacttgt tcgcctcggg attctttttt tccgctccct
     1681 ggcatacttg cgaaccgcag acggccaaag acgtgactag aatgaaagca aaggatctgt
     1741 tcatagattt ctgttagacg ttgatattct ttaaaccatt cgaacctaga ggcgtgaata
     1801 gttggctgta agttcaacag tttcaagttt gttccggcga tggcgcattt tcgatatcga
     1861 tctttggctc cggacttgac gtgacggatg aactgggccc gggctcatcc acccgcgtaa
     1921 tatcgaccgc acgacccgtc gtctcatcaa tttgaacgag tgcgccgcgc aagcgtactt
     1981 cgccgccggc taccggaaac gatgacggca gattcgagat aaaccgattc aggatcggat
     2041 ccacggcgcg tcccagtatg gagtttacag gtccgcacat tccggcgtcg cataggaaag
     2101 ctgtgccgcc ggggaagatt tgctcgtcgg ctgtctgaac gtgagtatgg gtgccgatga
     2161 cggcggacac tttgccgtct agaaatcgac cgaacgcaat tttttcgctc gtggtttcgc
     2221 cgtgtgcgtc gacgataatg ttcggcgttt cgctgcgcat tttggtgact gctgcttcga
     2281 cagcacgaaa tggattgtcc aaaatcggct gcatgaatgt gcgcccctgg acgttgatga
     2341 cgccgatttt tcccttggct gtttcaagaa tgatcgatcc gctacccggc gtgccctcag
     2401 gataattcag tgggcgcaac aacctaggtt cagtgtcgat gaacgaaagg atctctttct
     2461 ggtcccagat atgatcgccg cttgtgataa ctgagactcc ggcgcgtaaa agatcgatgg
     2521 tgattttgcc ggtaatgccg cggccgcccg cggcgttctc gccgttgacg atgacgaaat
     2581 ctaaagcgta tttcgccttg aggtccggca accgggctat taccgcggcg cgacctgatt
     2641 gcccaacaat atcgccaagg aaaagaatcg ttaacatgag aggcgtgatt cgttgaatcg
     2701 ttacatagtt acatcggatt tgcgattcaa cgatttaagc gttcaccgat cgagcgcggc
     2761 gaagcgattc gcctggtacg ccatagcctg gcgaacgcgg gttgtcagaa cttcgacatg
     2821 cttatttata gcgatctttg cagcaggtct gcaggccgct gagaacatta gcgtcctcgg
     2881 aaacaagcca cagtgggccg ttctcgaaca ttaccagcag acaatcacgc gtgatgaatt
     2941 cgcgcacctg atcaatgagg tcttcggcac acacgggttc gcgcccgatt taattgaaat
     3001 aaaagacgac acagcgcgga tcctcatgaa ccgcgacgcg caaaagtctt tcaccttgca
     3061 gtttgctgcc agtgattcgg cccgaaaacg ggtgccgcgg ctgtggcgac cggtgaactc
     3121 tttgtcccca accaaacgag agaagccgct ctcgggttta aaaatcgcgc tcgacccggg
     3181 gcatcttggc ggggaatggg cgaagatgga ggagcgttgg tttcagttcg ccgacagtaa
     3241 gcccattcag gagggcgatt tgacgttgcg cgtagcgcga ctgctggcga cgcgattgcg
     3301 cgatctcggg gcgaaagttt ggtttgtgcg aaatgacaat gaacccatca cagccaagcg
     3361 tccggatgat tttcgcgaat tggccaggaa gattctcatc aagaatggtg tgccacagcc
     3421 gcgccccgat gttcttgatt cgaccgatcc ggagaaagag aagaccatcc gatggcaaag
     3481 cgaaatcttg ttctaccgct acagtgaaat tcggcgacgt gcggcgctag tgaatttcaa
     3541 actgcatcct gaccttgtgt tgtgtttgca tttcaacgct gaaggatggg gcgacccgac
     3601 tagtccgatg ttgaccgacg cgaatcatct tcacctgctg gtcaacggat cgtatttggc
     3661 ggaggagctg gaatttgatg acgaacgttt cgaaatggtc cggcggctcc tcagtcgcgc
     3721 gtacgatgag gagttaccgt tggccgacac gattgctctg gcaatgtcgc gcgagactgg
     3781 cctgccgccg tacgcctatc caaccactaa cagcacgacc aaagtcggca gcagcggtta
     3841 tgtgtacgcg cgcaatttgc tggccacacg tctttaccgt tgcccagtcg tgtactgcga
     3901 gccgtatgtc atgaacagca aagacgtgtt tgcccgtatt caggccggcg attacgaggg
     3961 aacgcgcaac atcaacggcg ttgaacgcaa gagcatcttc cgagaatacg ccgacagcgt
     4021 agcggatggg ctggtggagt attactcaaa agcgcgagaa ttgtagggcg tctgtgtcag
     4081 acgccttggc gtttcacaga aacgccctac aaattttcta tcgcctctag aatgtcctcg
     4141 agcgttacat tgtccgtgac agaggcagcc ccgatgcgag gcgtcacgac gaaccgaact
     4201 tttccgcttt cgaatttttt gtcgaagttt actgcctcga gaatcttctt acgcggaaat
     4261 ttgggtggca atcgggttgg taactcgaat cgctcaagaa gatcaacaat tgcggcgcgc
     4321 tgatccgccg gcaggccagc tcttttcgct gagatcgcgc acgcggccac aattccaagg
     4381 ctcactgctt ctccatgcag gaatttccgg taatttcccg cgcgctcgat cgcgtggcca
     4441 actgtatggc caaaattcag aagcgcacga tggcccgtct ggtcacgctc gtcttgcgcg
     4501 acgattctag atttgatccg gatattgcgc tcgatcagtg attgtagggc aagcgctccg
     4561 cttgccaggc tggagcttgc atcccacgac tgcagtatcc ggaacatttc tgcatcggcg
     4621 ataatggcgt gcttgatgat ctccgcgaac ccttgattaa attgacgacg cggcagcgtt
     4681 ttcaaaacat cgagatcatc aatcaccagc gagggttcat ggaaagcgcc gatcaaattt
     4741 ttcccagcgc gcgtatccac accggttttc ccaccgattg agctatccac catggccagc
     4801 agcgttgttg gaatttggac atgcgggatt ccgcggtgat aaatcgccgc tacgaatcca
     4861 gaaatgtcgc caaccactcc gccaccgaga ccaaccacac acgatgtacg gccaagtccc
     4921 gccgcgatca ttcggtcgca aatcgcgcct gcttgctcaa gcgtcttcga tttctcgccc
     4981 gccggaatgg taatcagggt gggacgaaat ccggctgaca ccaagccttt tttcactcga
     5041 tcggcgaaaa gcggcgcgac gtttctatcg gaaatgagaa cacattgccc agataccccg
     5101 agcgcctgac atcttttccc ggtccggggt agtaactgct tgccgattag gatgcgcccg
     5161 atgccggcac gcacagagat catgtgagcg cgcttgttac ttcgttgggt ctcaatgttt
     5221 cgattgcatc ccaagtccaa tctggcgcag gttgctcata tcttttgtga ttttcgcgcg
     5281 ctcataagca ctatttaagg gtggaacggc gattccgagc aggatgtcga tggccgcgaa
     5341 cacaacgagc aactcaatca gggtgaaggc gcgcgtaaca gggcgagagg aatttttgtc
     5401 catggatatg gagtaacaac gcatgatatt gcgcttgggt gcgaagcgaa agcgaaaagg
     5461 aaccgctaaa tcaagattgc ttgacaagtg attttgcatt cggtgtatgt agatcatgcc
     5521 cgagcaagag cctatcccac ctccgcctgc gtcaggtccg ggccccgagc tcgggccgaa
     5581 atcaacatca accggtttac cttcgaacgt ggctgcggca ctcgcctgca ttccattaat
     5641 tggcgggatc attttttaca tagttgaaaa gcacgacagc tttgtgcgtt tctacgcgat
     5701 gcagtcgatc atcttcgggg gcgcgtggct tttgtttaat atcgtctcga gaatcctgtt
     5761 cctgattctc tggtcgattc cggcgattgg tggaattctc gtgtttttct ggggaatcat
     5821 ccaggcgctt gttcacatag cgtttttagt ggtgtggatt gtcgctaccg tgaaagcatt
     5881 cacaggcgtg cgttgggaca ttccgtacat cgggccggtg gcgcggcggc aagaaggcgc
     5941 ggtttaagcg cgtcattccg agtaaagttg agtagcccca tggcgaagct tcaggtgatc
     6001 ccgcgactca ctcaggatga ccgctgttga agtaatttca ccactacttc cgttagaatc
     6061 agctcgtggt cgagctgcgt ggtcacgagt ttgacgttcg catcgaggca ggcgcgcatg
     6121 gactcgatta attcactgct ttcgaactga ttcgcatgtt gcgcagcaat gccgagaccg
     6181 taggcgttaa ttgaaccgtc ttttttgcga ggcaagtgct ccgttgcttt tgcgggcaga
     6241 cgtttcatgg cagcaatgaa ttgaaagggc gaatgcggac gccgaatccc atgctgttcc
     6301 atcagatctt ttgccagcaa taaattgcgg attgtcggca cgatcgcagc cagcaaaata
     6361 cccgcggcct tttcaccttg ctccagcaaa cgtcgcacga gcgtcagcgc cagttccaga
     6421 tcccggacgc tcagtgcgtt gctcagttcg aaaattaccc ccgcacgtga tagcggaacc
     6481 aactcacgaa cgagctcgat acgcacggcg cgatcttccc cgaggaacgt gtcgattttt
     6541 tccagctcgt tatcgatctg tcgcgtgtcg cctccggtca gcaaaacgaa caattcaagc
     6601 gcagcctcat cgaattccaa ttttcgcttt tttgcgcggc ccagaacgat ttcagttgcc
     6661 tgttcttccc agccggcacg cgccgaatcg agccggtcga aaacttgaac ctccgcgcgt
     6721 ttaaccaacg tcttataaaa cgagcggcgc ttgtcgactt cggtggcgct gatcaaaagc
     6781 atgactccat ctccaacgcc gctgtcgatc agcgcagata attcttcgag cgcagtttgc
     6841 accgcgtttg agcgcgcctt tacgtcatcg ccgaggaagt ttgcgttttt cagccagacc
     6901 acttttgtgc taccgaagaa agggagggtc tgcaacgcct cgatcgccga tcgaattcgc
     6961 ccggcggcct gatcggcgtt atctgcgacg ccatcgatta cttctaggcc aaaatcgcca
     7021 gcatcgtctg gcacgagttt ttgcgccagc tccgccgcca cgtgtttcac ttcagattca
     7081 tccgagccga cgaccgcgta tatgtttgcg gtttccgatt tggttttcgt cttcggcatc
     7141 ggcgatttct cgcatgcggg atgaaaatcg acaaggtgga tcgtcttgtc ctcaagacga
     7201 tggcagagta accgctgaag gcgcgaacat caggtgtcag gccgcgagtc gcaacgagtt
     7261 gaggacaacg cgttccacct acacgcgcga gcgacgccga ccggcgttgc gggagtatct
     7321 tatgggtcgg cgctttggtt cgattttcgc cagtccggag ccgcttttta cttccataat
     7381 ctggtcgcgc agcagcgcgg ctcgctcgaa ttcgagattt gccgaagcct cctgcatttc
     7441 ctgctctaat tcacgcagca gttccgacag attaaagtcg ccaccggttt cgcggatcac
     7501 cgacgattcc acttcgcgtc cgcggaaaat tgtatgcaga ctttcctgga cggcgcgccg
     7561 gacagtttgc ggcgtgatgc cgtgcgtttc gttgtactcc atctgcttgg ctcgacggta
     7621 ttcggaaatc gacatgagcg cttccatgct ttgcgtgatg gtgtc
//
LOCUS       DATDAJ010000150         2483 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_915479, whole genome shotgun sequence.
ACCESSION   DATDAJ010000150 DATDAJ010000000
VERSION     DATDAJ010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915479"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1901)
                     /locus_tag="VIS53_03540"
     CDS             complement(<1..1901)
                     /locus_tag="VIS53_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEY5766891.1"
                     /translation="MPFQLESNFKPRGDQGQAIAKLLKSVEAGNRHQTLLGVTGSGKT
                     FTVANVIQKLDRPTLVISHNKTLAAQLYSEFKQFFPRNAVEYFVSYFDYYQPEAYIPR
                     SDTYIEKDSSINEEIERLRLSTASALLSRRDVIVVASVSCIYGITSPEDYAQMLLTVK
                     YGQHITREAVLGRLIDMLYERNDVNFARGRFRVRGDVVEVYPATADEEGIRLEFFGDE
                     IDAIRRFDPLTGHTHESLNVITFFPAKQFVTPADKLNRALRTIREELEQRIIELESQN
                     KLLEAQRLRMRTEYDLEMLQEMGFCNGIENYSRHLSGRPPGSRPYTIIDFFPDDFLTV
                     IDESHATIPQIGGMYEGDRSRKTVLVNYGFRLPSALDNRPLNFDEFMKLTDQTIYVSA
                     TPAEFEIQNSVAGNKGYVPHKRQRIGEEELIPFVLPGESVGASDHRPRGSGAQRGPSQ
                     TTVRISATDDPPEKFETHTAGAPLVVEQIIRPTGLLDPKITMKPLKNQIDETMELCRQ
                     RVEKGERVLVTTLTKRTAEDLADYLRDVGLKVRYLHSDIDAIERVEILRGLRAAEFDI
                     LVGINLLREGLDLPEVSLVCILDADKEGFLRSQTSLIQTAGRAARHINGEVVLFADTI
                     TQSMEALIS"
     gene            2069..>2483
                     /locus_tag="VIS53_03545"
     CDS             2069..>2483
                     /locus_tag="VIS53_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766892.1"
                     /translation="MDLVAYSTQLLDEERQYQEHLTEIVRGTEQVRSAKGAGKLIRLP
                     AGDGMALVFLDSPEAPVRCAIEISKKSKEYPQLKLRMGILSGPINEVRDVNDSANVAG
                     AGINLAQRVMDCGDDRHILLSKRVAEDLGHSREWGP"
BASE COUNT          548 a          653 c          701 g          581 t
ORIGIN      
        1 atcgagatga gagcttccat gctttgcgtg atcgtgtcgg cgaagagcac tacttcgccg
       61 ttgatatggc gtgccgcgcg accggctgtc tggatgagcg aagtctggct gcgcaaaaat
      121 ccttccttgt ccgcgtccaa aatgcacacc agcgaaacct cgggtagatc gaggccctcg
      181 cgcagcagat tgatgccgac aagaatgtcg aattccgctg cgcgcaatcc acgcaaaatt
      241 tccacgcgct caatcgcgtc gatatcgcta tggagataac gcaccttcaa tccaacatcg
      301 cgtaaataat cagccagatc ttccgcggtt cgcttggtca gtgttgtgac cagaacgcgc
      361 tcgccttttt ccacccgctg gcggcaaagc tccatcgttt cgtcgatctg attcttgagc
      421 ggcttcatcg tgattttcgg atcgagaagt ccggtaggcc gaatgatctg ctcgactacg
      481 agcggtgcgc cggccgtgtg cgtttcgaat ttctccgggg ggtcatcggt ggctgagata
      541 cgcactgtgg tttgcgatgg gcctctctga gcgccgctcc cacgcggtcg gtggtcggag
      601 gcccctacag attcacccgg cagtacgaac ggaattaatt cttcctcccc gatgcgctgt
      661 cgcttatgcg gaacatatcc tttgttgccg gcgacgctgt tttgaatctc gaattctgct
      721 ggcgtagcgc tcacataaat cgtctggtcc gtcaatttca tgaattcatc gaaattgagc
      781 gggcgattgt cgagcgcgct cggcagacga aacccgtaat ttacgagcac agttttgcgt
      841 gaccggtcgc cttcgtacat cccgccgatc tgcgggatcg tggcgtgcga ttcgtcgatg
      901 acggtgagaa aatcgtccgg aaaaaaatcg atgatcgtgt aaggccgcga gccgggaggc
      961 cgcccggaca aatggcggga ataattttca atcccgttgc agaaacccat ttcctgcaac
     1021 atctccagat cgtattcagt gcgcattcgc agccgttgcg cctcgagaag tttgttttgc
     1081 gattcgagtt caataatgcg ttgctcaagc tcttcacgga tcgtgcgcag tgcacgattc
     1141 agcttgtccg cgggcgtcac gaactgtttg gctggaaaaa atgtgatgac attgagcgat
     1201 tcgtgcgtat gaccggtcag cggatcaaat cgccggatcg catcaatctc gtcaccgaaa
     1261 aactccaggc gaattccttc ttcatccgca gtggcgggat aaacctcaac cacgtcgccc
     1321 cgcacacgga acctgccgcg cgcgaaattc acgtcgttgc gctcgtacag catgtcgatt
     1381 agccgaccga gcaccgcttc gcgagtgatg tgctgtccgt atttcacggt gagcaacatt
     1441 tgtgcgtaat cttcgggcga cgtgattccg tagatgcaag acacgctcgc caccacgatg
     1501 acgtcgcgtc gtgaaagcag cgcactggca gtcgacaggc gcaatcgctc aatctcttcg
     1561 ttgatggagg aatccttctc gatgtaggtg tcggagcgcg ggatgtaagc ttctggctgg
     1621 taataatcga agtagctgac gaaatattcg accgcgttac gcgggaagaa ttgcttgaac
     1681 tccgagtaaa gttgcgcagc cagtgttttg ttatgcgaaa tgaccagcgt cggcctgtcc
     1741 agcttttgga tgacattggc gacggtgaaa gtcttgcctg aaccggtcac acccagcagt
     1801 gtctgatggc ggtttcctgc ctcgacagac ttcaaaagct tggcgatcgc ctgtccctgg
     1861 tcgccgcggg gtttgaagtt ggattcaagc tgaaacggca tccgataatt ttagcacaag
     1921 atcgaaagca acgtcggggc tgacttttgt tgacaggctt tcacggaaat aggatttcag
     1981 aaatcgcaaa catcgcggaa gattgcgatt caacccatgg cctctgaatc aggaacgtca
     2041 gtccgattac agattggacg ttctgtttat ggatttggtc gcttattcta ctcagcttct
     2101 cgatgaggag cgtcaatatc aggagcatct gactgaaatt gtccgcggta ccgagcaggt
     2161 ccgcagcgcc aaaggagcgg ggaagctgat tcgacttccc gcgggcgacg ggatggcgct
     2221 cgtttttctt gatagtccag aagcgcctgt gcggtgcgcg atcgagatca gcaagaagtc
     2281 gaaagagtat ccgcaactga agctgcgaat gggcatcctc agcggaccga tcaatgaagt
     2341 tcgcgacgta aacgattcgg caaacgtcgc cggagcgggg attaaccttg cgcaacgagt
     2401 catggattgc ggagacgaca gacacattct gttgtccaag agggtcgcgg aagatctggg
     2461 ccattcgcga gagtggggtc cat
//
LOCUS       DATDAJ010000151         2425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_917183, whole genome shotgun sequence.
ACCESSION   DATDAJ010000151 DATDAJ010000000
VERSION     DATDAJ010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917183"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..238)
                     /locus_tag="VIS53_03550"
     CDS             complement(<1..238)
                     /locus_tag="VIS53_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766893.1"
                     /translation="MSANESKIREQILALLSRKDYRPLNKIEIANKLGVSGRARVALR
                     KTLRDIERAGEIARIRKDQYVLPAEADLVTGKLSV"
     gene            504..797
                     /locus_tag="VIS53_03555"
     CDS             504..797
                     /locus_tag="VIS53_03555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEY5766894.1"
                     /translation="MHPADCLLIGWWNIPPQTNSIAEGSAPKGVHGTNDFGKSGYGGP
                     CPPPGTHRYSFKIFALDHELDLSSAAKRSQVDAAMKGHVIAQGELIGRYVRKK"
     gene            901..1746
                     /gene="folP"
                     /locus_tag="VIS53_03560"
     CDS             901..1746
                     /gene="folP"
                     /locus_tag="VIS53_03560"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY5766895.1"
                     /translation="MRERIWKIGKRVFDVSRHGLIMGVLNVTPDSFSDGGEFLTADKA
                     TERGLQMAAEGAHIIDIGGESTHPGSQSVTVAEELRRVIPVIENLHRKLDVPISIDTS
                     KADVARAAIEAGASVVNDVTGGQGDEQMLPLVAESKAAFILMHMQGTPATMQIQPRYT
                     DVVAEISEFFRQQYARAIGLNIDPMAIAFDPGIGFGKTLEHNLELLAQLERLRTHDRA
                     LVVGVSRKSFLGKLIGSPEISDRLVPGLALTSLLRARGADVFRVHDVKENVYALRVTE
                     AILQR"
     gene            1748..>2425
                     /gene="cdaA"
                     /locus_tag="VIS53_03565"
     CDS             1748..>2425
                     /gene="cdaA"
                     /locus_tag="VIS53_03565"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: protein motif:HMM:TIGR00159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004016 - adenylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase CdaA"
                     /protein_id="HEY5766896.1"
                     /translation="MIHQLIDLWLRSWRSLVEILLLWVAIYYGYLYFRGTRGAKVLTG
                     LAIVFLTLTLISTLLNLVVIGWIVRSFSVFLAIALVVIFQPELRRGLAALGGHPIFSL
                     TSERRETVHDLAEAVTQLANKQYGALIAIERDTSIRVYEETGVIIDGEFSVELILTIF
                     HPKAALHDGGVIIRNGRIAAAACIFPVSQRETLDRSLGLRHRAGLGITEESDAVAVVV
                     SEETGAIS"
BASE COUNT          545 a          632 c          682 g          566 t
ORIGIN      
        1 gaaccgataa ctttccggtt accaagtcgg cctcagccgg caagacatat tgatccttgc
       61 ggatgcgcgc gatctcaccc gcgcgttcga tatcacgcaa tgttttgcgc aaggcgacgc
      121 gtgccctgcc gcttacgcca agtttgttgg cgatctcgat cttgttcagc ggccggtaat
      181 ctttcctgga cagcagcgcg agaatttgtt ctctaatctt agattcgttt gcgctcattt
      241 taggcgaaac aatatgctca ggtttgtcga tttagcgcga tttcaatcgg aggtctgaca
      301 atgcgaaagc cgataatcag tggggcagtc gtgatattac tcgcagtaat cacttcattc
      361 gcggtggaag gagcgagaat gaaaatcaaa agcgctgctt tccaggacgg cggcaacatt
      421 ccatccggac accaccccgc ctttgcagat aaccggtgtt ccttcagaag cgaaaagtct
      481 tgtcttgatt accgacgatc cggatgcacc cagcggattg tttactcatt ggctggtgga
      541 acatcccgcc acagaccaat tcaattgccg aaggcagtgc gccgaaaggc gtgcacggca
      601 caaatgattt tggcaaatca ggttacggcg gtccgtgtcc gcccccagga acacatcgat
      661 attcgttcaa gattttcgct ctcgatcacg aactggattt gagctctgct gcaaagcgga
      721 gccaggtgga cgccgcgatg aaaggtcatg tcatcgcaca gggcgagctc atcggacgct
      781 acgtaagaaa aaagtagcgc gcctccggct tgcggcggag ctcttaaatc gcaagcagga
      841 cgcattcgct accatggcgc gccttcgaat aaaccgtccc ctgtgttagt ctgactcgta
      901 atgcgcgaga ggatctggaa aattggtaag cgcgtcttcg acgtctcccg ccatggctta
      961 atcatgggag ttttaaatgt aacaccggat tcattttcgg acggcggtga atttctcaca
     1021 gcagacaaag caacagagcg cggcctacaa atggcagcgg aaggcgctca cattatcgac
     1081 attggcggcg aatcgacgca tcccggctcg cagtctgtca ctgttgcgga ggaactgcgt
     1141 cgcgtgattc cggtgataga aaacctacac cgaaagctcg atgtccccat ttcaatcgac
     1201 acgtcgaaag cagatgtggc gcgcgccgcg attgaggcgg gcgcttcggt tgtgaacgac
     1261 gtgacaggcg ggcaaggaga cgaacaaatg ctgccgctcg ttgccgagag caaagcggcg
     1321 ttcattctca tgcacatgca aggaacacct gctacgatgc agatccagcc gcgctacaca
     1381 gacgtcgttg cagaaatttc tgaatttttt cgacaacaat atgcccgcgc cataggttta
     1441 aacattgatc ccatggcgat tgcgtttgat ccgggcattg gtttcgggaa aacgctcgaa
     1501 cacaacctcg aattgctcgc gcagttggag cggctgcgca cgcatgatcg agccttggtg
     1561 gtgggcgttt cgcgcaaatc gttcctcggc aaattgatcg ggtcgccgga gatcagcgac
     1621 cggctcgtac ccggcctcgc gctaacttcg ctcctgcggg cgcgaggcgc ggacgtgttt
     1681 cgtgttcatg atgtgaaaga gaatgtttat gcattgcggg taactgaagc gattctgcag
     1741 aggtagaatg attcatcaac tcattgatct gtggctcaga agctggcgca gcctggtgga
     1801 aatccttctg ctgtgggtag ccatctatta cggctacctc tatttccgcg gaacgcgcgg
     1861 ggcgaaagtg ttgacgggat tagcgattgt ttttcttacg ctgaccctga tctccacgct
     1921 cttgaatttg gtggtgattg gctggatcgt ccggagtttt tctgtcttcc tcgcgatcgc
     1981 gctggtggtg atttttcaac ccgagctgcg acgtggcttg gctgcgcttg ggggacatcc
     2041 aattttctcg ctgacgagcg agagacgaga aaccgttcac gatttggcag aagcggtgac
     2101 gcagttggca aacaaacagt acggcgcact gatcgcgatc gagcgcgaca cgtcgattcg
     2161 cgtctacgag gaaacaggtg tcattatcga cggcgagttt tcagtcgaac tgatcctgac
     2221 gatctttcat ccaaaagccg ctttgcatga cggtggagtg atcattcgga acggacgaat
     2281 cgcagccgcg gcctgcattt ttcccgtaag tcagcgggaa acattggacc gcagcctagg
     2341 attacgccat cgcgccgggc tcggaatcac tgaggaatcg gatgccgttg ctgtcgttgt
     2401 ctccgaagag acaggcgcta tttcc
//
LOCUS       DATDAJ010000152        14716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_917189, whole genome shotgun sequence.
ACCESSION   DATDAJ010000152 DATDAJ010000000
VERSION     DATDAJ010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 14716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14716
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917189"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VIS53_03570"
     CDS             complement(<1..453)
                     /locus_tag="VIS53_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766897.1"
                     /translation="MQDAFRKQSWIRITLVVIALAAAAVVVTGEIVRSAAGRKLREAI
                     LAELQPVALKNCTLKRFGSANDGGYLMCENLISPLDTGYSYGVGTNDDWACEVSRRYH
                     VPVHQYDCFDPARPICDGAGFVFHNECVGNRTGYRDSRFFDTLENQISK"
     gene            1231..2493
                     /locus_tag="VIS53_03575"
     CDS             1231..2493
                     /locus_tag="VIS53_03575"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5766898.1"
                     /translation="MSIYTHTKRLVASAIVLACTSMLAETPEALVNQALQRNPELNFF
                     VAEIAAAKGAVRTAKTVRNPELSGEVGYKNSRDNSGGASGDGAILAFSLSQTFEYPGR
                     LALRKAIANHDLALAELHLQQFRFTLAARVRTLAYGISSAQQKSATAREVASRFQALS
                     DVLAQRPTAGVTPQLEARIIDANTLAFRRQERDAALATVTALTELNQLCGRPADAPLT
                     MAAAKVQFIAASLPRLLSAARANAFDVRIRQVEFAQQGFKVALSKNERFPAISVGPFY
                     SMENATDREQRAGLGISLPLPLWDRNVGNIATSKARQQQAEASLAMTQREVERRVAQN
                     AAIFTAKRAEIDNLKEDELAKFREAAATADRNYQLGAVPLTIYVETQKQYLELVGTLS
                     ELQKEALQAAQELEILTGLKLYGEEAQR"
     gene            2490..5657
                     /locus_tag="VIS53_03580"
     CDS             2490..5657
                     /locus_tag="VIS53_03580"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEY5766899.1"
                     /translation="MIDKILEFSVRQRILVLMGAIALLLGGLWSATKLPMDAIPDITG
                     VQVQVNTTVPALAPDEVEKLVTVPLEMALGGVAGVTEMRSLSRFGLSQITLQFTDKSD
                     IYRARQLVTERLQSVADSLPPGLTPKLIPITTGLGEVFYYTVDYAPNAPNAPPTREAQ
                     LMALWEMQEYILKPQLRAVPGVADVNAYGGYVKQFVVQPNIAKLRDAGLTVNDLAKVV
                     GENVENAGGGIVNAGSEQLVIRGVGRVASREEIAELPVKFAAGVMPLRVKDFAEVQIG
                     HAFRTGAATHSGQEAVLGVAMMLMGENSHAVAERVAEKIEEIQKRLPSGVIISPEYNR
                     KNLVHRTIRTVTTNLFEGALLVIAVLLFLLGNWRAALIVAAAIPLALLFAITGMTRFG
                     ISGNLMSLGAIDFGLIIDGAVVIVENVIRQLGVKQHQLGRRLTTDERLHTVMAASKQV
                     GTPMFFGVLIIAVVYVPILALSGIEGKMFHPMALTVMLALGGSLVLALTLMPALCSFL
                     LGGRIAERDNLIVRLIKRAYSPTLRWSLRLPSLVVLGAIALFALAILIFRHLGADFIP
                     KLDEGTFTMMVFRTSSINIDQSIEEQRKTEREIPKRVPEVTHVFSRIGSAEIATDPMP
                     PSDCDFYLYYKPQSEWRKVDSRPISKEDLAQIITTEIEVLNPGARVMVAQPVEMRFNE
                     MLEGIRADIAVKIFGNDYDVLERLGSEVKEVLEQIPGTREGEGEVEYETTGRAPMLEI
                     RVKRDVLAKYNLHAGDVNQTIAAALGGQTVGTMIEQNRRFDIVVRLAEADRENLEKIR
                     ALPVRVGDSGLLPLGDLADIQRVKTVSPILRDSAQRRAALMVNLRGRDVESWVREADA
                     KVRDHVKLPEGYTLEFGGQFENLREAKTRLALVVPAALVFIFVLIFMAFGSVRQALLV
                     YSGVPLAVTGGVFALWLRDMPFSISAAVGFIALSGVAVLNGVVMISYFNQLREEGRDV
                     RTAVIEGSLTRLRPVLMTAAVAAFGFIPMALSTSAGAEVQRPLATVVIGGIISSTFLT
                     LVVLPVLYEWAERNRVLNTQELRAQ"
     gene            complement(5763..6254)
                     /locus_tag="VIS53_03585"
     CDS             complement(5763..6254)
                     /locus_tag="VIS53_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766900.1"
                     /translation="MKNVLRSMVGTLVVAAFLAIAPPLYARGGHGGHRGHHGGHAVKH
                     AKAGHVKGKYAGFRARGGRGHYVARAARGHGRYAARAYNGRYAARAYNWNGGRRWGGN
                     YWYPSYGYSRVGYYSLGYGYPYYGTGYYGYRYGGYYPYYGNWGYYPYLYGYWPSVSFS
                     FGF"
     gene            complement(6368..6721)
                     /locus_tag="VIS53_03590"
     CDS             complement(6368..6721)
                     /locus_tag="VIS53_03590"
                     /inference="COORDINATES: protein motif:HMM:NF019401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1622 domain-containing protein"
                     /protein_id="HEY5766901.1"
                     /translation="MENFRQLMEIIGTAVDGVGVSIVAAGALVATARLLVHRAHNVGN
                     YYSSFRQDIGRAILLGLEFLIAGDIIRTVVVAPTIQNVLVLGLIVLIRTFLSLSLQLE
                     IEGRLPWRREGLPPD"
     gene            6968..7753
                     /locus_tag="VIS53_03595"
     CDS             6968..7753
                     /locus_tag="VIS53_03595"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEY5766902.1"
                     /translation="MTFAQTVSLGAIAGFTIYLGLPIGRLQKLSPWVRSFLTATSAGI
                     LLFLLFDIISHVEEPIETALRQAVEGKASATDAVLFLIIFVIGFGVGLLGLVAFESRF
                     LRAHVQQGQLAPARLALIIATGLGLHNFSEGLAIGQSAVQGEAALASLLIIGFALHNA
                     TEGFGIAGPLAGTRPSWNFLGLLGLIGGGPTFLGTIAGYSFTSRPISILFLAVAAGAI
                     LYVIGELYHVARRAEVKTAAAFGLLVGFLVANGTELVLEMSGS"
     gene            7831..8742
                     /locus_tag="VIS53_03600"
     CDS             7831..8742
                     /locus_tag="VIS53_03600"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEY5766903.1"
                     /translation="MTWKMLKLLIMAVVCLTAATPSRAQEAEAATVEVTGTDVEVTGP
                     APGVLRQDMPVGPYNQPEWTTERGFGTSRVYVRPPGSIEFNQFWTPEWKDGHVEHSFR
                     EEVEIGLPYRLQLDLYQNWGIEEGDTVYRGSSVELRYALANWGKIPLNPTLYGEWNFN
                     DAAPDKWELKLLLGQTFGKRWNWAGNFTYEQETGGEREQEVALSSALTYALIDQTLNA
                     GIEMLWEHKTTKDSRGDPEIEFLIGPSINVRPTRHSFITVAPLFGTTDDSPDAEIFVI
                     AGFNFRFGGPAGPDEEGPSAPASMFGR"
     gene            complement(8841..9221)
                     /gene="acpS"
                     /locus_tag="VIS53_03605"
     CDS             complement(8841..9221)
                     /gene="acpS"
                     /locus_tag="VIS53_03605"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEY5766904.1"
                     /translation="MSVIGIGVDVIECSRIQRSIERFGDRFLHRVFTDGEIEYSMSMK
                     FPERHLAARFAGKEAVAKAFGTGIGKAMGWRNIDIRKKESGEPYLVFSGPAEAFALER
                     GIASALITLSHTENYAVACVVLQR"
     gene            complement(9268..10020)
                     /locus_tag="VIS53_03610"
     CDS             complement(9268..10020)
                     /locus_tag="VIS53_03610"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY5766905.1"
                     /translation="MSSLRLGVNIDHVATLRQARYATMPESKNAEPDLLVAARICERA
                     GAGGIVAHLRSDRRHIQDHDIERLRQNIMTKLNLEMGNTEEIIDVALRIKPEEVCLVP
                     EKREEITTEGGLDVRAQRKELEPTIRRLQVAGIRVSLFIDPTLEQVDVAAELGVEMVE
                     LHTGRLANAFTEKIQKQELEQLRAAARAASESNMQVNAGHGINYKNIALIHQIPCLSE
                     LNIGHAIVSRAMWVGLENAVKEMLAAMANYPE"
     gene            complement(10322..10699)
                     /locus_tag="VIS53_03615"
     CDS             complement(10322..10699)
                     /locus_tag="VIS53_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766906.1"
                     /translation="MKIASLITALVATAALTAFGQDGVIQEVKHGAKKAGETIKDGLE
                     TAGEKAKETAKTVGKKTKEAAETVGEKTKETGETVVRKTKQTVDGTGEKVSETTQKTH
                     HKSRTSASKAKAQTTEEQTTDGD"
     gene            complement(10804..11520)
                     /locus_tag="VIS53_03620"
     CDS             complement(10804..11520)
                     /locus_tag="VIS53_03620"
                     /inference="COORDINATES: protein motif:HMM:TIGR04283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY5766907.1"
                     /translation="MQVSIIIPVFNEAPSMRLFLSNLRERTAGAEIIVVDGGSTDGTD
                     QLAQGLCDKVIRSAAPSRARQMNIGADAARGEIFWFLHADAEVPPDSLNEIARIMRNP
                     EVCGGFFRIRLPPEPAVYRLTDGFAHYAGLALRMRCGDHGIFCRRTAFVEAGGFPDVP
                     LMEDVEFFRRLRRCGRVVYSNKRIWASPRRYETVGPARLTFAYGSIAMLYLFGVSLST
                     LARIYRRTCCAPHEQAILPK"
     gene            11647..12108
                     /locus_tag="VIS53_03625"
     CDS             11647..12108
                     /locus_tag="VIS53_03625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766908.1"
                     /translation="MIAKIITAAAISLFFMPASALFSQEHPEHPEHPKAGGAKKQVST
                     ADISAGIKKNITAETNKSDGKFHVKHEGQDLALDLVKVHDDRLQDLGDGKYFACVDMK
                     GTDGKTYDIDFFLSGQPGKMKVTETAVHKIEGKPLYNWKEDNGKWNKVPVS"
     gene            12116..13075
                     /locus_tag="VIS53_03630"
     CDS             12116..13075
                     /locus_tag="VIS53_03630"
                     /inference="COORDINATES: protein motif:HMM:NF013961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEY5766909.1"
                     /translation="MVKLTMRLILASALFFAGALTIPAAGEPGIIQGADEFEFVYRVK
                     LPEITGSARIWIPLAKTDSFQTVSVEKLNIPMKWDKVQDRDYGNDICVVNAQPQDSGK
                     TIELRYKVVRKEKAAYPASNADAARYLRPEKLVPVNETFKTLAEKATAGKTDDLERAK
                     ALYDHVISRMRYDKSGNGWGRGDAVYACDARTGNCSDFHAYFIALARSINIPARFAIG
                     ATIPADKNEGKIEGYHCWAEFLADGQWVPMDISEAWKNPKLADYYFGHNPANRFELTK
                     GRDLVVDPEPESGPINFLVYPLLEMNGEVLKPETTFEFQRIGA"
     gene            13181..14077
                     /locus_tag="VIS53_03635"
     CDS             13181..14077
                     /locus_tag="VIS53_03635"
                     /inference="COORDINATES: protein motif:HMM:NF016041.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEY5766910.1"
                     /translation="MLTSPHFVRLTPMPAIPFMDYIGNPLLMCLFIILLLLQWRFPLR
                     RQHFSILHRLVRNFVLSIPGFALVRLAMLPIPIAIAIWALDRHVGLLNWFHLPTWAVV
                     ITTFLLMDYAYWWWHWAMHMVPFFWRFHNVHHTDLDLDVSTAARFHFGEMILSTGFLS
                     LAVLLFGIGPIMLVLFFATFEGATLFHHSNWRLPIRVERFLNLILVTPRMHGIHHSIV
                     QGETNSNWGTIFCWWDKLHRTLRRDVPQDAITIGVAAYREENELTLGKLFALPFRVQR
                     EWRLPSGEIPEREPQPTDELAR"
     gene            14235..14480
                     /locus_tag="VIS53_03640"
     CDS             14235..14480
                     /locus_tag="VIS53_03640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766911.1"
                     /translation="MLKLVQPLADASTETFQRLIEMNEFVAFCIINSRQLITRAVPRQ
                     AAGEIRQAPCADQPPSAAQFRQKRSADQRDRTDTNPE"
BASE COUNT         3280 a         4058 c         4001 g         3377 t
ORIGIN      
        1 cttgctaatc tggttttcca gcgtgtcgaa gaaacgcgaa tccctgtacc cggtgcgatt
       61 tccgacgcat tcattgtgaa agacaaaccc agcgccgtcg cagattggcc tcgctggatc
      121 gaagcaatcg tattggtgca cgggaacatg atatcggcgc gacacctcgc atgcccagtc
      181 gtcatttgtg ccgacgccat atgagtatcc tgtatcaagt ggcgaaatca gattctcaca
      241 catcaggtaa ccaccatcat tggcgctgcc aaagcgcttg agcgtacagt tttttaaagc
      301 gaccggctga agctcggcga gaatcgcctc tcgcaacttg cgccccgccg cgctacggac
      361 gatctcgcca gtaacgacga cagcggctgc cgcgagagca attacgacca gcgtaattcg
      421 aatccatgat tgtttcctga aagcatcttg catgggtcgc ggtctattaa gagcattctg
      481 acggtggcga ttacaacaaa gcttttgcga ttagttaatg agatgaagat tttccaaggc
      541 gcagcagtgt tgatattttg atgtgagcgg aaagcaatgg acaagaagaa cacgcatgca
      601 gatcgcgccg taatttgtgt ctccctcctc ccaagcgctg ataccgggca cttacaaagt
      661 gatctggcgt gtaacttccg cggatacaca tgtcaccagc gtgatttcca tttccaaatc
      721 accccgtaat acggccgttt caccgtccga tgaataatcg ttgtggtttg acactgcctg
      781 atggggacgc taagaaatca cattaatgag tttcctacgg acatcgcgac tccgtttgct
      841 agcggccttt cttgcggtgt tcgcattcgg cggcgacatc gttgcggatt cgatcgttga
      901 tgcgcgcgga gaacattgtg ccgcacaaac atgcccagcg gattctcacc acgagaaagc
      961 accttgttcc cactgctcat gcgccgttca caacggcagt gtcatcgctg ccaatagtgg
     1021 cgtgtacgtt aatgctgacg tccaaccatc cgttttcatc ttgataagcg atgaatcggc
     1081 gcgggttggt ccgcctgcgg caattgatca tccgcctcag ctcgcctaac aactgagcgc
     1141 aggcgcggtg tctccgcgca tcttttgctc aggtgtcctg cgtcggcaca acgcaaacgc
     1201 gttgtggctt tctgccattt ttgccaaaca atgtccattt acacacatac caaacgactt
     1261 gtagcgagcg ccattgtgct cgcgtgcacg agtatgcttg ccgaaacgcc ggaggcgcta
     1321 gtcaaccaag cgctccagcg aaatccggag ttaaactttt tcgtcgctga gattgctgct
     1381 gccaagggag cagtccgaac tgccaaaacc gttcgcaacc ccgagctaag cggcgaagtt
     1441 ggctacaaga actcgcggga caactcagga ggagcgagcg gcgatggcgc gatcctcgct
     1501 ttctcattga gccaaacctt cgagtatccc ggtcgacttg ccctacgcaa ggcaattgca
     1561 aatcacgatc tagcgctcgc ggaactacat ctgcaacagt ttcgcttcac attggccgcg
     1621 cgagtgcgga cgctggcgta tggcatttcg agcgcgcaac aaaaatcagc cacagcgcgt
     1681 gaagtcgcca gccgctttca ggcgctaagc gatgttctgg cacagcggcc gacagcgggc
     1741 gtaacgccgc agttggaagc acgaattatc gatgcaaaca cgctcgcctt tcggcgtcag
     1801 gaacgcgatg cagcattggc aacagtaaca gctttaacgg agctaaatca actttgcggg
     1861 cgccccgcag acgcgccgct cacaatggcc gcagccaaag tgcagttcat tgcggcatcg
     1921 cttcccagac ttctcagtgc tgcgcgcgcg aatgcgttcg atgttcgcat ccggcaggtc
     1981 gagtttgctc agcaaggctt caaggtcgcc ttatcgaaaa acgaacgatt tccggccatt
     2041 tctgtcgggc cgttttactc gatggaaaat gcaaccgacc gggagcagcg agcagggctc
     2101 ggcatttcat tgccgctgcc gctgtgggac cgcaacgttg ggaacattgc gactagtaaa
     2161 gcgcgtcagc agcaggcgga ggcctcattg gctatgacgc agcgcgaagt cgaacgacga
     2221 gttgcccaaa acgccgccat ctttacagcg aagcgcgctg agattgacaa tctcaaagag
     2281 gatgagttag cgaaattccg cgaagcggcg gcaacagcgg atcgcaatta ccagttgggc
     2341 gctgttccgc tgactatcta cgtcgaaaca cagaagcaat atctcgagct ggtcggcact
     2401 ctcagcgagt tgcaaaaaga ggcgctacag gccgcgcaag agttggagat cctgaccgga
     2461 ctcaagcttt acggcgaaga ggcgcagcga tgatcgacaa gattctggag ttctcagttc
     2521 gccagcgaat cctcgttctg atgggcgcta tcgcgcttct tctcggcggg ctttggtcgg
     2581 caacgaaact gcccatggac gccattcccg acattaccgg agtgcaagta caagtgaaca
     2641 cgacggtgcc agcgcttgcg ccggatgaag tggaaaagct cgtgaccgtg ccgctggaaa
     2701 tggcactcgg tggagtggcc ggtgtaaccg aaatgcgttc gctgtcgcgc ttcggtctgt
     2761 cacagatcac acttcaattc accgacaaga gcgacattta ccgtgcacgt cagctcgtga
     2821 ccgagcgttt gcaaagcgtg gccgattctc tgccacccgg gctaacaccg aagctcattc
     2881 cgattacaac aggactgggc gaagtatttt attacaccgt cgactacgcg ccgaatgcgc
     2941 caaatgctcc gcccacgcgc gaggcgcagt tgatggcgct ctgggaaatg caggaatata
     3001 tactgaagcc gcaactgcgt gctgttcccg gtgtcgctga cgtcaacgct tatggcggct
     3061 acgttaagca gttcgtcgtg cagccgaaca tcgcgaagct tcgtgatgcg ggcctcacag
     3121 ttaacgacct cgcaaaagtc gttggcgaaa acgttgagaa cgcgggcggc ggcatagtca
     3181 acgcgggaag cgaacaactt gtcattcgag gcgttggcag agttgcgtcg cgggaggaaa
     3241 ttgcagagct accagtaaaa ttcgctgccg gtgtgatgcc gctgcgggtg aaagatttcg
     3301 ctgaagttca aattggccac gcgtttcgca ccggcgctgc gacgcacagc ggacaagagg
     3361 cggtgctggg cgtggccatg atgctgatgg gtgagaacag tcacgccgtc gcggagcgtg
     3421 ttgcggagaa aattgaggaa attcaaaagc ggctgccatc gggcgtgatc atcagcccgg
     3481 aatacaacag gaaaaacctg gtgcatcgaa cgattcgtac cgtgacaacg aacctgttcg
     3541 aaggcgccct acttgtcatc gcggtcttgc ttttccttct tgggaactgg cgcgccgcgc
     3601 tcatcgtcgc agctgcaatt ccactggccc tccttttcgc gattacgggc atgacgcggt
     3661 tcggaatttc gggaaacttg atgagtcttg gcgcaatcga ttttgggctc atcatcgacg
     3721 gcgctgtcgt catcgtagaa aacgtcattc gacaactcgg cgtaaaacag caccagcttg
     3781 ggcgacgcct gacaaccgac gaacggctgc acaccgttat ggccgccagc aaacaagtcg
     3841 gcacgccgat gttctttggt gtgctgatca tcgctgttgt ttatgtgccg attctggcgc
     3901 tgtcgggcat cgaaggaaaa atgtttcacc cgatggcgct gacggtaatg ctcgccctgg
     3961 gcggatcatt ggtgctggcg cttactttaa tgccggcgct gtgttcattt ctactcggag
     4021 gacgaatcgc cgaacgcgac aatttgatcg tccgtctcat taagagggcc tattccccca
     4081 cccttcgctg gtcgttgcga ttaccctcgt tggttgtgct cggtgcgatc gcgctatttg
     4141 cattggcgat actcatcttt cgtcatctcg gagcggattt cattccgaag cttgatgaag
     4201 gtaccttcac catgatggtt tttaggacga gcagcatcaa catcgaccaa agcatcgaag
     4261 agcaacggaa gaccgaacga gaaatcccaa agcgtgtccc ggaggtcacg catgtctttt
     4321 cgcgaatcgg cagcgctgag attgccactg acccgatgcc gccgagcgat tgcgattttt
     4381 acctctacta caaaccgcag agcgaatggc gaaaggtcga cagtcgaccc atcagcaaag
     4441 aagacctggc gcaaatcatc acgaccgaaa ttgaagtttt aaacccaggt gctcgcgtca
     4501 tggtcgcgca gccggtcgag atgcggttca atgagatgct ggaaggcatt cgcgcggata
     4561 tcgcggtcaa aatcttcggg aacgactacg acgtgctgga gcgactcggc tccgaagtga
     4621 aagaagtgct ggaacaaatt ccgggtacac gcgaaggcga aggcgaggtc gaatacgaaa
     4681 cgaccggacg cgccccgatg ctggagattc gagtcaagcg cgacgtgctg gcaaaataca
     4741 atcttcacgc cggcgatgtg aaccaaacta ttgctgccgc cttgggcggg cagaccgtcg
     4801 gaacaatgat cgaacagaat cgtcgcttcg acattgtagt ccggcttgct gaagccgatc
     4861 gtgagaatct ggaaaagatt cgcgcattgc cagtccgcgt tggagactcc ggccttctgc
     4921 cactcggtga tctcgccgac atccaacggg ttaaaacggt ctccccaatt ttgcgcgatt
     4981 cagctcaacg ccgcgcggcg ttaatggtca acctgcgagg ccgcgacgtg gaaagctggg
     5041 tgcgagaagc tgacgcaaaa gtgcgcgatc acgtcaaatt gccggaagga tacacgctcg
     5101 aatttggtgg acagttcgag aatcttcgcg aagccaagac gcgactggcg cttgttgtgc
     5161 ccgcggcgct tgtgttcatc ttcgtcctga tcttcatggc cttcggcagc gtacgccagg
     5221 cgttgcttgt gtattccggc gttccgttgg ctgtgacagg tggcgttttt gccctgtggc
     5281 tgcgcgatat gccatttagc atatccgcgg cggtaggttt catcgcgttg agcggagtcg
     5341 ccgtgctcaa cggagtcgta atgatcagct atttcaatca actgcgcgaa gaaggtcgtg
     5401 atgttcgcac cgccgtgatc gaaggatccc ttacacggtt gcgtccggtg ctcatgaccg
     5461 cagccgtcgc agcgttcggt tttattccga tggcgctatc gacaagcgca ggcgcggagg
     5521 tgcaacgtcc gctggcgacg gtcgtcattg gcggcattat tagctcaacg tttctcacgc
     5581 tcgtcgtcct gcctgtttta tacgaatggg cggaacgaaa ccgcgtcctg aatacgcaag
     5641 aattgcgtgc tcaatagttc gccgctggca caatcgttat gcgctgcttc gaaataagct
     5701 catgagagat tagcaagcgg gccgcattac tggggcccgg cttacgtcag tagtgactcg
     5761 atctagaatc cgaagctgaa gctcacggac ggccagtatc cgtataggta agggtagtat
     5821 ccccaattgc cgtagtacgg atagtaccca ccgtagcggt aaccgtaata gccagtcccg
     5881 tagtatggat agccatagcc caagctgtaa tagcccactc gagaatatcc ataggacgga
     5941 taccagtaat tgcctcccca gcgacggccg ccattccaat tatatgcgcg agctgcatag
     6001 cgcccgttat atgcgcgagc tgcatagcgc ccgtgtccgc gcgcggcccg cgcgacatag
     6061 tgaccacggc caccgcgagc acggaaacca gcgtatttgc ccttaacgtg gccggccttg
     6121 gcatgtttga cagcatgccc accatggtga ccgcgatgtc cgccatgacc tccacgggca
     6181 tacaatggcg gtgcaattgc taaaaaagct gccaccacca gtgttccaac cattgaacgg
     6241 agtacattct tcatttaaca gcctcctttt tacttatttc gttaaaggag gcggtattgg
     6301 ccccctcggc acacgggaaa ttctattgcg cggtcaccga taatttacga tcaaccttgt
     6361 cggcagatta atccgggggt agtccttcgc ggcgccaagg caatcttcct tcgatttcca
     6421 gttggagcga caaactcagg aatgtgcgga tgagcacaat caatcccaga acaagcacgt
     6481 tttgaattgt cggtgcgacg actacggttc ggataatgtc gccggcgatc agaaattcga
     6541 ggcctaataa aatcgcgcgg ccgatgtcct gccgaaaaga cgaatagtaa ttgccgacgt
     6601 tgtgcgcgcg atggaccagg agtcgcgctg tcgcgaccag cgcgccagca gccacgatag
     6661 ataccccgac gccgtcgaca gccgtgccga tgatttccat gagttgtcga aagttttcca
     6721 tgaacgtctt agttgccgga aagcgcgccc cttttcaatg ctgtttaaat ctgccgtcat
     6781 ggatcacctt ctctctttgg gtgccgtgtc ccttaaccct tccaccgcaa ttcaccgcta
     6841 aaaatttgca accgaacgga agcgagccgc gattgtgggc gttaatctgc acgtcgtaga
     6901 tgcgacggag caagacaggt gcgcaatcaa cagcaagcca aaaaaccatg aagagggaga
     6961 aaatcgaatg acctttgctc aaacagtttc actcggcgcc attgccggat tcacgattta
     7021 cctcggcttg ccgatcggcc ggctgcaaaa actctcgccc tgggtccgct cgtttttgac
     7081 tgccacctcg gccggcattc tccttttcct tttgttcgac atcatttcgc acgttgaaga
     7141 gccgatcgaa acggcgctca ggcaggctgt cgaggggaag gcgagtgcaa ctgatgccgt
     7201 cctgtttttg ataatctttg taatcggatt cggcgtcggt ttgctcggtc tggtggcttt
     7261 tgaatcgcgc ttccttcgag cgcacgtcca gcaagggcaa cttgcgccgg cgcgactggc
     7321 tctcatcatc gctactggtc tcggcctcca caatttttcg gaaggtctgg ccatcggtca
     7381 gtcggcggtg caaggcgaag cggcattagc gtcgttgttg atcatcgggt tcgccttgca
     7441 taatgctacg gaaggttttg gtattgcagg cccgttggcc gggactcgtc cttcatggaa
     7501 ctttttgggg ctactgggcc ttatcggtgg cggccccact tttctcggaa caatcgccgg
     7561 ctacagtttc acctcacggc ccatttcgat tcttttcctg gcagtggccg ccggcgcgat
     7621 cctctatgtg atcggtgagc tttatcatgt cgcccggcga gcggaagtga agaccgcggc
     7681 cgcatttgga ttgttggtcg gctttctggt ggccaacgga accgagttgg tcctggaaat
     7741 gtcgggcagc tagccgcctg caacctaccg ctaaaaatcc gcaaccgaac ggcagtgaaa
     7801 tgcgacaagg cgtgctaatc tgcgcgccgt atgacttgga agatgttgaa gttgctgatc
     7861 atggcagtcg tctgcttgac tgcagccacg ccttcacgcg ctcaggaggc ggaggcggca
     7921 actgttgaag tcaccggcac ggatgttgaa gtcaccggtc cggctccggg cgttctccgc
     7981 caggacatgc cagtgggccc ttataatcag ccggaatgga cgacagaacg cggctttggc
     8041 accagccgcg tttacgtgcg gccgcccggg agcatcgaat tcaaccagtt ctggacgccg
     8101 gaatggaaag atggccatgt cgagcacagc tttcgtgaag aagttgaaat cggtctgccg
     8161 taccgccttc agctcgatct ttatcaaaac tggggcatcg aggaaggaga cacagtctac
     8221 agagggtcga gtgtggagct gcgctacgcg ctggcgaact ggggcaaaat tccactgaat
     8281 cctacccttt acggcgaatg gaatttcaac gatgccgctc ctgacaaatg ggagctaaaa
     8341 ctgttgcttg gccaaacatt tgggaagcgc tggaactggg ccggcaattt cacttacgag
     8401 caggagacgg gcggcgaacg cgagcaggag gtcgcgctga gcagcgcact gacgtatgcg
     8461 ttaatcgacc agactttgaa tgcgggtatc gaaatgctct gggaacacaa gacgacgaaa
     8521 gattcgcggg gtgacccgga aattgagttt ttgatcggcc cgagcatcaa cgtgcggcca
     8581 acgcggcaca gttttatcac cgtcgcacca ctctttggca cgacggacga ttcgccggac
     8641 gctgagatat tcgtcattgc gggattcaac ttccgcttcg gtgggcctgc tggaccggat
     8701 gaggaaggcc catccgcgcc tgcatcaatg ttcgggcggt gagcgaaaaa ttggaagacc
     8761 tactgagctt ctagtggtct gcgttgtcac tgcgcgcttc acgcgggcga tgtgatccct
     8821 gttcgaattc gcgctccgcg ttaacgttga agaacaacgc acgcgacagc gtaattttcg
     8881 gtgtgactga gagtgatgag agccgaagcg atgcctcgtt ctaaggcaaa agcctccgcc
     8941 ggtcctgaaa aaacgagata aggttcgccg ctctcttttt tgcggatatc aatgttgcgc
     9001 cagcccatcg ctttgccgat gcctgtgcca aacgcttttg ccactgcttc tttgcccgcg
     9061 aaacgcgcag ccagatggcg ctccgggaat ttcatcgaca tcgaatattc aatttcacca
     9121 tctgtgaaga cgcgatgcag aaatcgatct ccgaatcgct cgatggaacg ctggatgcgc
     9181 gagcattcga tcacatcaac gccgatgccg atcacgctca tgcgaaattg tcatagcgtt
     9241 gaggacaacg cgatccacct ttggcgctca ttcgggataa tttgccatag cggcgagcat
     9301 ttccttgacg gcattttcca agccgaccca catcgcacgc gatacgattg cgtggccgat
     9361 gttgagttcg ctcaaacatg gaatttggtg gatgagcgcg atgtttttgt aattgatgcc
     9421 gtggcctgcg ttaacctgca tattggattc cgatgcagcg cgcgcggctg ctcgcaattg
     9481 ttccagttct tgcttttgga tcttttccgt aaatgcattc gcgagcctgc cggtatgcag
     9541 ctcgaccatt tctacgccca actcggccgc gacatccacc tgttccaacg taggatcgat
     9601 aaacaggctg acgcgaatcc cggccacttg cagccgtcga atggtcggct cgagttcctt
     9661 gcgctgcgca cgcacatcca agcctccttc cgtcgtaatt tcttcacgtt tttccggcac
     9721 caagcagact tcctcgggct tgatgcgaag cgcgacgtca atgatctcct cggtgttgcc
     9781 catctcgaga ttcaatttcg tcatgatgtt ctggcgaaga cgttcgatgt cgtggtcttg
     9841 aatatggcgg cgatcacttc gtagatgggc gacgatcccg ccggcgcctg cgcgctcgca
     9901 aatccgtgcg gctacgagta aatccggctc tgcattcttc gattccggca ttgtggcata
     9961 gcgggcctgc cgcaatgtcg ccacgtgatc aatattcact ccgagacgca gactgctcat
    10021 cgcgccaaat aggactcact cgacgaaagt gagcaagttg gaacgagtaa aatcttgggt
    10081 cgcggtcagt ctgacgaagc aaagctgcaa cgcagcagat gaagtgcacg aggccaggct
    10141 ttcatgcctc ttgttggtcg actaagcagc gaacaaatcc ccagatattt gaaagcctgg
    10201 ccttctgctt cgcatttcgt tacacccctt cgctcaacat gacaggatgc tgagcagagg
    10261 cgttgtggct acaattgccg ccgattcact gtcagggcgt cgggcttggt gccggcgtac
    10321 ttcagtcgcc gtctgtcgtc tgttcttccg tggtttgggc ctttgctttg ctggcgctcg
    10381 tcctggactt gtggtgcgtc ttctgagtag tctccgatac tttttcgcct gtgccatcga
    10441 cggtttgttt tgtttttctg actaccgtct cgccggtttc tttcgttttc tcacctacgg
    10501 tctcggcagc ctcttttgtt ttcttcccaa ccgttttggc ggtctccttt gctttctccc
    10561 ctgctgtttc caatccgtct ttaattgttt cgccggcttt cttcgcaccg tgttttacct
    10621 cttgaatcac cccatcctgg ccgaaagcag tcaacgcggc cgtcgcaacc aaagcagtaa
    10681 tcaaactcgc gattttcatg ttctcttcct ccaattgatt ccgtcctact atcggttcgg
    10741 atcaggcagt gtcatcgcgc gcacgaccaa cgcgcgtgga tctaaattgg ctcatatgcc
    10801 ccgctacttg ggcagaatcg cctgctcgtg cggggcacaa cacgtgcggc ggtaaatgcg
    10861 ggcaagcgtg gacagggaga cgccgaaaag ataaagcatc gcaatcgatc cgtaggcaaa
    10921 tgtgagccgt gccggtccca ctgtttcata acggcggggg ctcgcccaaa ttcgtttgtt
    10981 gctatacacg acgcgaccgc agcggcgaag ccgccgaaaa aattccacat cttccatcag
    11041 cggcacgtct ggaaatcccc cagcctcaac aaacgctgtt cgccggcaga aaattccatg
    11101 atcaccgcat cgcattcgca acgcgaggcc cgcgtaatgc gcaaagccgt ccgttagtcg
    11161 atatacggcc ggctcgggcg gcaggcggat ccggaagaaa ccgccacaga cttctggatt
    11221 gcgcattatg cgcgcaatct cattcaagga atccggcggc acttcggcgt ccgcgtgcaa
    11281 aaaccagaaa atttcgccgc gggctgcatc ggctccaatg ttcatttgcc tggcacggct
    11341 gggtgcggcg ctccggataa ctttatcgca gaggccttgc gccaactggt cggtgccgtc
    11401 agtgctcccg ccatcgacga caataatttc cgccccagct gttcgctcac gcagattcga
    11461 cagaaatagg cgcatcgatg gcgcctcatt aaaaaccggg ataataatgg agacctgcat
    11521 tcaagatttt tggctgaact tctctttgcg cgacaaagca ccaaaagccg cggctcaaaa
    11581 taaaatggtt gctcgatacg tctcttcgac gaatagaatt caacaaatct taactgagaa
    11641 attcttatga tcgcaaaaat catcaccgca gcagccattt cgttattctt tatgccggca
    11701 tcggcgctct tttcgcagga acacccggag catcccgagc atccgaaagc aggtggcgcc
    11761 aaaaagcaag ttagcacggc tgatatctcc gccgggataa agaagaatat caccgccgag
    11821 acgaataaga gcgacggaaa attccatgtg aaacacgaag gtcaggatct cgctctcgat
    11881 ttagtaaagg tccacgacga tcgattgcag gacctcggcg acggaaaata tttcgcctgc
    11941 gtggatatga aaggcaccga cggaaagact tacgacatcg atttcttcct aagtggtcag
    12001 ccgggcaaaa tgaaggtcac tgagaccgcg gtgcacaaga tcgagggcaa accgctttat
    12061 aattggaagg aagacaacgg taagtggaat aaagttcccg taagctagga aacaaatggt
    12121 gaagttgacc atgcgcttga ttcttgcttc cgcgctgttc ttcgctggcg cgcttaccat
    12181 tcctgccgcc ggtgagcccg ggatcatcca aggcgccgat gaatttgagt ttgtttatcg
    12241 cgtcaagctt ccggaaatca ccggctccgc tcgcatctgg ataccgctcg cgaagacaga
    12301 ttcttttcaa accgtaagtg tggaaaaact gaacatccca atgaaatggg ataaagttca
    12361 ggaccgcgat tacggcaatg acatttgcgt ggtcaatgcg cagccgcagg acagtggcaa
    12421 gacgatcgag ttgcgataca aggtcgtgcg taaggaaaaa gcagcctatc cggcaagcaa
    12481 tgcagacgcc gcgcggtatc ttcggccgga aaaattggtg ccggtaaacg aaacgtttaa
    12541 gacacttgcc gaaaaagcga cggccggaaa aactgatgac ctcgagcggg ccaaagcgtt
    12601 gtacgatcac gtcatcagcc gcatgcggta cgataaatcg ggtaatggtt ggggtcgcgg
    12661 agatgccgtt tacgcgtgcg atgctcgcac cggaaattgc tctgattttc acgcgtattt
    12721 cattgctcta gctcgaagca tcaacatacc tgcgcgtttc gccatcgggg cgaccattcc
    12781 agccgacaag aatgagggca agatcgaggg ctatcattgc tgggctgaat ttctcgcgga
    12841 cggccagtgg gtgccgatgg atatcagtga agcgtggaag aacccaaagc tcgctgatta
    12901 ttattttggc cataatccgg cgaatcgatt tgaactgacc aagggtcgcg atctggtggt
    12961 cgatccagaa cctgaaagcg gaccgatcaa tttcctagtg tatccgctgc ttgagatgaa
    13021 tggcgaggtc ctaaaacccg agaccacttt cgagttccag cgcattggcg cataactcaa
    13081 gctttaagcc tgacaggtca ggcaggcttc ccagcctgct gcattttggc cggcaagatg
    13141 cctatgttat gaccagggca ttgtctctac gcgtcagcca atgttaacat caccgcattt
    13201 cgtccgcctc acgcccatgc ccgccattcc ctttatggat tacattggca acccgctgct
    13261 gatgtgcctg tttatcatcc tacttttgct tcagtggcga ttcccattac gacggcaaca
    13321 tttcagtatt ctacaccggc tcgtgcgtaa ttttgtgctg tcaattcccg gtttcgcgct
    13381 tgttcgtctc gcgatgttgc cgattccgat cgcaatcgcg atctgggcgc tggaccgaca
    13441 cgtcggctta ctgaattggt ttcaccttcc aacctgggcc gtcgtgatca caacattcct
    13501 tttaatggac tatgcctatt ggtggtggca ctgggccatg cacatggtgc cgttcttctg
    13561 gcgatttcac aatgtgcatc acaccgatct ggatctggat gtgagcaccg ccgcgcgatt
    13621 tcacttcggc gaaatgattc tttccacagg ctttctctcg ttggcagtgc tgctctttgg
    13681 tatcgggccg atcatgctcg tcctgttctt cgccaccttt gagggagcga cactttttca
    13741 tcattccaac tggcgcctgc caattcgggt cgagcggttt ttgaacctga ttctcgttac
    13801 accgcgcatg cacgggattc atcattccat cgtgcagggc gagactaatt caaactgggg
    13861 tacaatattt tgctggtggg acaagctgca tcgcacattg cggcgggacg tgccgcagga
    13921 cgccatcacg atcggggtcg cggcatatcg tgaggaaaac gaactgaccc tgggaaaact
    13981 ctttgcattg ccgtttcgtg tgcagcgcga gtggcgatta ccaagtgggg aaatccccga
    14041 gcgcgagccg cagccgacag acgaactcgc tcgatagtcg gtcgaattca cgagaatacc
    14101 aactgcgcta tttcacctga cggtacaatc aaccgcaact aacgcctcga caaagctcgt
    14161 tccggaagct tatcaaaacc tgtccccaag ctcgccggcg accacgcgca cgatcacgcg
    14221 ctggtggcga tgcggtgctg aagcttgttc agccgctggc cgacgcgtcc actgaaacct
    14281 ttcagcgact cattgaaatg aacgaattcg ttgccttttg tattatcaat tcccgtcagt
    14341 tgattactcg ggcagtaccg cgtcaagccg ctggcgagat tcgccaggcc ccatgtgccg
    14401 accaaccacc gtcagccgcg cagtttcggc agaagcgcag cgccgaccag cgcgaccgaa
    14461 ccgataccaa tccggaatag ttgctcacgc gaacccacat tctgtttcat cgtttcacct
    14521 cctctccata tgtttcgata ttcgttagcc gtgcggcttg cgtcatttta tattttttgc
    14581 tttgacaaaa ttgacgaaat tggaaagcag aatgtttctt gcaatcaatc tgttttgccg
    14641 cgacgaatcc cgtgggagga aacattatgt caaaacgatt actcattgct ttgctgggag
    14701 cggtgttcac ctgcgc
//
LOCUS       DATDAJ010000153         2084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_924964, whole genome shotgun sequence.
ACCESSION   DATDAJ010000153 DATDAJ010000000
VERSION     DATDAJ010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_924964"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VIS53_03645"
     CDS             complement(<1..384)
                     /locus_tag="VIS53_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEY5766912.1"
                     /translation="MGYRRCGFRYEKKLRVTGVSSIAGIDEAGRGALAGPVVAAAAIL
                     PEKFRHRRLNDSKQLASELREEIYCELISNSDIRWTVGIVDSVEIDRINILRASHRAM
                     RVAIEGLLEPPDHVLIDGLPVIPFPL"
     gene            complement(499..840)
                     /gene="rplS"
                     /locus_tag="VIS53_03650"
     CDS             complement(499..840)
                     /gene="rplS"
                     /locus_tag="VIS53_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEY5766913.1"
                     /translation="MNQIIDTIEKEQQKSDAKAFSVGDSVRVHTRVVEGDKERIQIFA
                     GVVIGRKGRGLNEMFTVRRISYGEGVERVFPLHSPRIAKVEVEKQGRARRARLNYLRT
                     RKGKEATAVRE"
     gene            1014..1087
                     /locus_tag="VIS53_03655"
     tRNA            1014..1087
                     /locus_tag="VIS53_03655"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1048..1050,aa:Arg,seq:ccg)
     gene            complement(1158..1487)
                     /gene="trxA"
                     /locus_tag="VIS53_03660"
     CDS             complement(1158..1487)
                     /gene="trxA"
                     /locus_tag="VIS53_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY5766914.1"
                     /translation="MENSAIITLNESNFDRELTQDDKPMIVDFWAEWCGPCKMIAPLL
                     DEIAREKAGTLKIAKVNVDENQSLSAKYNIRAIPALLFFKNGQLRDQVIGVASKKDLL
                     SRLEALA"
     gene            complement(1490..1981)
                     /locus_tag="VIS53_03665"
     CDS             complement(1490..1981)
                     /locus_tag="VIS53_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766915.1"
                     /translation="MAEPDQPKKETVRIQLPHPPVTKPSEPGVKPHETVRIQLPVRET
                     GTPPVPPPSQSAHENISPPNFFPPPKPPAASRPLSASVNPLPIPPPSGPKKETVRIPV
                     TPEPLRSSQKKTQPLIAMPNVVSENPPIAVAPVEKGSMRLYWMLLAMSALILIIQIWT
                     YFS"
BASE COUNT          461 a          578 c          567 g          478 t
ORIGIN      
        1 aagtggaaaa gggattaccg gcaaaccatc aatcaaaacg tgatccggcg gttcgagtaa
       61 cccttcaatc gcgacccgca tagcacgatg gctcgcgcgc aggatgttaa tccggtcgat
      121 ctcaacagaa tcgacaatgc cgacggtcca tctgatgtcg gaattcgaaa tcagctcgca
      181 atagatttct tcgcgtaatt ccgacgcgag ctgtttggaa tcgttcagac gacggtgccg
      241 aaacttttcg ggaagaatcg ccgcagcggc aacgaccggg ccggccaacg cgccacgccc
      301 ggcttcgtca attcctgcaa tgctcgagac tcccgtgacg cgaagttttt tttcataccg
      361 aaatccgcat cgccggtagc ccatcggcgc aaatcttcaa cagatttgcg cgaagtgaca
      421 agtgatgagt gacgagaatt gtagggcgtt tctgtgaaac gccatcggat ggcgtctaac
      481 cagacgccct acagtcgatc actctctgac tgctgtcgct tctttcccct tgcgagtgcg
      541 aagataattc agtctcgcgc ggcgagcgcg gccttgtttt tccacttcca cttttgcgat
      601 acgcggcgaa tgcaggggga atacccgctc gacgccctcg ccgtacgaga tgcggcgcac
      661 ggtgaacatt tcattgagtc cgcgaccctt ccggccgatc actacccccg caaagatctg
      721 aatccgttcc ttgtctcctt ccaccacgcg ggtgtgcacg cgcacgctat cgccaacaga
      781 aaacgccttg gcatcacttt tctgctgttc cttctcaatc gtatcgatga tttgattcat
      841 aaactcgtcg ccagccgcgc ggctgcgggc gcacactctc attcgacggc acgggttttg
      901 caacccaaaa tcccaatcat tcggacacca gggacgaagg aagaccggag gcaggacaac
      961 atcagaaagt ctgtgaaaac caggcggatc tatggctaat tcccgttctc attgcgctcg
     1021 tagctcaact ggatagagcg ttggcctccg aagccaaagg ttgtgggttc gacccccgcc
     1081 gggcgcatcg cttgtagggc aggcgctccg cctgccacgc tttgggtcta gaattttctc
     1141 cccttgcgaa gaattcccta agccagtgct tccagccggc tgagcagatc cttcttgctc
     1201 gcaacgccga tgacctgatc gcgcagttgg ccattcttga aaaaaagcag cgccggaatc
     1261 gcgcgaatgt tgtacttcgc tgagagactc tggttttcgt ctacgtttac tttcgcaatt
     1321 ttgagtgtgc ctgctttttc ccgcgcaatc tcgtccagca gcggcgcgat cattttgcac
     1381 ggaccgcacc attccgccca aaaatcgacg atcatcggtt tgtcgtcttg cgtcagttcg
     1441 cggtcaaagt tcgattcgtt aagcgtgata atggcagaat tttccatagc taagaaaaat
     1501 acgtccaaat ctggataatc aaaatcaacg cggacatggc cagaagcatc caatacagcc
     1561 gcatggagcc tttctcgacc ggtgctacag cgatcggagg attttctgaa acgacgttgg
     1621 gcatcgcgat gagcggctga gtctttttct gagacgagcg caacggttcg ggcgtcacgg
     1681 gaatgcgcac ggtctccttt ttcggtcctg acgggggtgg aatcggaaga ggatttactg
     1741 aagctgataa cggacgcgag gcagctggcg gcttcggcgg cgggaaaaag ttcggaggag
     1801 aaatattctc gtgcgctgac tgcgagggag ggggaacagg cggagtgccg gtttcacgaa
     1861 ctggcaactg gatccggacg gtctcgtgcg gtttcacacc tggctccgac ggcttcgtta
     1921 caggcggatg cggcaactgg atgcgaaccg tctctttttt tggttggtca ggttcggcca
     1981 ttagtatcgg agaaattgat cagaaatcgc cgacttgtca ttacgcaatc ttgccaggaa
     2041 aaggtgactc gcgtcaggcc agtagatcgt agccgcggct tcct
//
LOCUS       DATDAJ010000154         3977 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_927964, whole genome shotgun sequence.
ACCESSION   DATDAJ010000154 DATDAJ010000000
VERSION     DATDAJ010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3977
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927964"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1400
                     /locus_tag="VIS53_03670"
     CDS             <1..1400
                     /locus_tag="VIS53_03670"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEY5766916.1"
                     /translation="QWPIPKQVDYKLIGSALSRVRWELEVNPRWKRDPNFYIEQTLTA
                     LAEALTVPAPYDEARSREFLARIENIPSILHQGAQNLENPPAPFASVAAQNLDRIRDR
                     LRTMASALVGSTTLKQDELNAATDRAVDALEKFQQQLKDKLPKLPQRTALGRDAYVWL
                     LRNVALMPFTPEELLAMGRQEWNQAVAFEAYEKNRNKDVPPLKIATDINTWIKDAAEK
                     ELQIRKFLEEHSILTVPKWVQHYTLRPTPEYLRALEFTEHDDFTSPSRLNENCVRYVP
                     GPSEKLGYFWRATAMDPRPITVHEGIPGHYFQLCLSWKNDNPIRRHYYDSGANEGIGF
                     YAEEMMLQAGLFDDNPHTREIIYNFMRLRALRVEVDVKLALGEFTLEQAAKYLQEKVP
                     MDEQTSRQEAIAFSTNPGGAMTYQIGKLQILKFLADARMQQGDKFNLRAFHDFVWKNG
                     NVPIALQEWEFLNAK"
     gene            complement(1501..1926)
                     /gene="rplK"
                     /locus_tag="VIS53_03675"
     CDS             complement(1501..1926)
                     /gene="rplK"
                     /locus_tag="VIS53_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006676477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEY5766917.1"
                     /translation="MAKEVIAHIKLQIPAGQANPAPPVGTALGPRGVNIMAFCKEFNA
                     ATQKQAGDILPVVITVFKDKSFTFITKSPPAAVLLKKAANIAAGSKEPNKTKVGKVTR
                     KQVMDIVNTKRKDLNARNDEAGFRMIAGTARQMGLEVVE"
     gene            complement(1960..2529)
                     /gene="nusG"
                     /locus_tag="VIS53_03680"
     CDS             complement(1960..2529)
                     /gene="nusG"
                     /locus_tag="VIS53_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEY5766918.1"
                     /translation="MGQTLAAKDQWYVVHVLSGQENKVRENIVKRIKTEEMGDVVYDV
                     LLPTERVSEIKKGKKTETTRKFFPGYLIVNMHLLDENNQLVGRTWYFIRNTPGVIGFA
                     GTKDKPIPMRQSEVESMLAQMKEREEKVKPKVSFEVGESVKVADGPFQNQTGVVEEID
                     PERGKLRVSVTIFGRATPVELEYWQVERG"
     gene            complement(2533..2751)
                     /locus_tag="VIS53_03685"
     CDS             complement(2533..2751)
                     /locus_tag="VIS53_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEY5766919.1"
                     /translation="MMTKVKNFFSEVKVELQKCSWPWDPKEKGFRRYKELVDSTIVVA
                     IAMLLLGGYVALFDFILVNVVHFFTRLH"
     gene            complement(2778..2850)
                     /locus_tag="VIS53_03690"
     tRNA            complement(2778..2850)
                     /locus_tag="VIS53_03690"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2815..2817),aa:Trp,seq:cca)
     gene            complement(2939..>3977)
                     /gene="tuf"
                     /locus_tag="VIS53_03695"
     CDS             complement(2939..>3977)
                     /gene="tuf"
                     /locus_tag="VIS53_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003640798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEY5766920.1"
                     /translation="IDNAPEEKERGITINTAHVEYSSDKRHYAHVDCPGHADYVKNMI
                     TGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPSIVVFLNKVDMVDDPELLDLVE
                     MEVRDLLTQYEFPGDKIPIVRGSALKALNGDAESEKQVTALVEAVDDYVPVPDRPIDQ
                     PFLMPIEDVFNIEGRGTVATGRVERGILKKMGEVELVGIRPTAKTVATDIEMFRKLLD
                     EARAGDNVGVLLRGLKKEEVERGQVIAKPGSITPHKKFKAEVYVLSKEEGGRHTPFFT
                     NYRPQFYFRTTDVTGTVKLPDGVEMVMPGDNISIEVELITPIAMEKTIRFAIREGGKT
                     VGAGRVGDILD"
BASE COUNT          859 a         1100 c         1075 g          943 t
ORIGIN      
        1 cacaatggcc gatcccgaag caggtcgact acaaattgat tggctcagca ttgtcccgcg
       61 ttcgctggga actcgaagtt aatccccgtt ggaagcgcga cccgaatttt tacatcgagc
      121 agacgctcac cgcactagcg gaagcgctca ctgtgccggc accctacgac gaagcgcgca
      181 gccgggaatt tctcgcgcgc atcgaaaaca ttccgtcgat cttgcatcaa ggcgcgcaaa
      241 acctcgagaa tccgccggcg ccattcgcga gtgtggcggc ccagaatctc gaccgaattc
      301 gcgaccgtct gcggacgatg gcgagcgccc tcgttggatc gactactctg aagcaagatg
      361 aactaaacgc cgcaaccgat cgcgccgtag atgcactcga aaaatttcag cagcagctca
      421 aggataagct accgaagctt ccgcaacgaa ccgcactcgg tcgcgacgcg tacgtctggc
      481 ttttgcggaa cgtcgccctg atgcctttca cgccggagga gcttctggcg atgggacgac
      541 aggaatggaa ccaggcggtc gcgtttgagg cgtacgaaaa gaaccgcaat aaggatgtgc
      601 cgccgctaaa gatcgcgacg gacattaata catggatcaa agatgcggct gaaaaagaac
      661 ttcaaatccg caagtttctt gaagagcaca gcattctcac cgtgccgaag tgggttcagc
      721 attacacgct tcggccaaca ccggaatatt tgcgcgcgct tgagtttact gagcacgacg
      781 atttcacgtc gccgtcgcga ttaaatgaga attgcgttcg ttacgtgcct gggccttccg
      841 aaaagcttgg ctacttctgg cgcgcgacag cgatggatcc gcggccaatc acggtgcacg
      901 aaggaattcc tggccattac tttcagcttt gtctctcgtg gaaaaacgat aatccgatcc
      961 ggcgtcacta ctacgattcc ggtgccaatg aagggatcgg cttttatgcg gaagaaatga
     1021 tgttacaggc ggggttattc gatgacaatc cacacacgcg cgagatcatt tacaatttca
     1081 tgcggctgcg cgcgctgcgc gtggaagtgg acgtgaaact tgccctgggc gaattcacgc
     1141 tcgagcaagc tgcgaaatat cttcaggaaa aagtcccaat ggatgaacag acctcgcgac
     1201 aggaagcgat cgctttctcc actaaccctg gcggagcgat gacctaccag atcgggaaat
     1261 tacaaattct gaaatttctc gccgacgcgc gcatgcagca gggtgacaaa ttcaatctcc
     1321 gcgcgttcca cgatttcgtt tggaaaaacg gcaacgtgcc gattgcgttg caggagtggg
     1381 aatttttgaa cgcaaaatag gggttggtag ctgtctcgag gcggcatgca gctagcattt
     1441 catgactgca aactcggcgg gctagcctgc aagccgaatc aggcagttgc ctgaactcga
     1501 ttattcgacg acttcgagcc ccatctgccg ggcagtgccg gcgatcatgc ggaaaccggc
     1561 ttcgtcgttg cgcgcgttta ggtctttgcg cttggtgttg acgatgtcca tcacttgttt
     1621 gcgagtgacc tttccgactt tcgtcttgtt gggctccttc gaaccggcag cgatgttcgc
     1681 ggccttcttg agcagaacgg ccgctggcgg actcttggtg atgaacgtaa aggatttgtc
     1741 tttgaagaca gtgatcacta ccggaagaat gtccccggct tgcttctgtg tggcggcgtt
     1801 aaattccttg cagaacgcca tgatgttgac gccgcgtgga ccgagagcag tgcccactgg
     1861 aggcgcggga ttcgcttgtc cggccggaat ttggagtttg atgtgtgcga ttacttcttt
     1921 ggccatctcg aaaagttcct agttgagtgt tgagggattt tatccgcgtt cgacctgcca
     1981 gtattccagt tccactggcg tggcgcgacc gaaaatggtg acggaaacac gtagcttgcc
     2041 tcgctcagga tcgatctctt caacgacgcc ggtctgattt tgaaaaggac cgtcggcgac
     2101 cttaacggat tcgccaactt cgaagctgac ttttggtttc actttctctt cgcgctcctt
     2161 catctgcgcg agcatgcttt ccacttcaga ttgccgcatc gggatgggtt tgtccttggt
     2221 cccggcaaac ccgatcacgc cgggtgtatt gcggatgaaa taccaggtgc gcccgaccag
     2281 ctgattgttc tcgtcgagca gatgcatatt aacaatcaaa taaccgggga aaaattttcg
     2341 cgttgtttca gtcttcttcc cttttttgat ttccgagacg cgctcggtcg gaagcagcac
     2401 gtcgtaaacc acgtcgccca tctcttcggt tttaatgcgt ttcacaatgt tctcgcgcac
     2461 tttgttttcc tgaccggaaa gcacatgcac gacgtaccat tgatctttcg ctgcgagtgt
     2521 ttgtcccata aatcagtgca atcgggtgaa gaagtgcaca acgttcacca ggataaaatc
     2581 gaacaacgcc acgtagccac cgagcaacag catcgcgatg gcaaccacga tggtcgagtc
     2641 caccagttcc ttgtagcggc ggaaaccttt ttccttcggg tcccacggcc aggagcattt
     2701 ctgcagctcg accttcacct cgctgaagaa gtttttgact ttggtcatca ttgcttcgct
     2761 acgtgattca ttagccacac gccaggaggg actcgaaccc ccaaccgacg gttttggaga
     2821 ccgctactct accaattgag ctactggcgt atttaatctt cctctttggc ttaatcttcc
     2881 tcttcctcac cttcgccaca acattaccag acgcagagga agagatagag gaagattgtt
     2941 aatccagaat gtcgcccacg cgacccgcgc cgacggtttt gccgccttcg cgaattgcga
     3001 accgaatggt cttctccatc gctatcggcg tgatcagttc gacctcgatc gagatgttgt
     3061 cgccgggcat gaccatttcc acgccatcag gcagtttgac ggtgccggtg acatcagtcg
     3121 tccggaaata aaactgcggc cggtaattgg tgaagaacgg agtgtgacgt ccgccttcct
     3181 ctttgctcag gacgtaaact tccgccttga atttcttgtg cggtgtaatg gaaccgggct
     3241 tggcgattac ctgtccgcgc tcgacttctt ccttcttgag accgcgcaac agcacgccga
     3301 cgttgtcgcc cgcgcgtgct tcatcgagaa gcttgcggaa catttcgatg tctgtggcga
     3361 ccgtcttcgc cgttggacga atgccaacga gttcgacttc ccccattttc ttgagaatgc
     3421 ctcgctcgac acgaccggtc gcgacggtgc cgcggccttc aatgttgaat acgtcttcga
     3481 ttggcatcag gaacggctga tcgattggcc gatccgggac aggcacgtaa tcgtcgacgg
     3541 cttccacgag cgcggtgacc tgcttctccg attcggcgtc gccgttgagc gccttgagcg
     3601 cgctacccct gacgatcggg attttgtcgc ctggaaattc gtattgcgtc aacagatcgc
     3661 gcacttccat ctcgacgaga tcgagaagct cggggtcgtc caccatgtca accttattga
     3721 ggaaaacgac gatggaaggg actccgacct gtcgcgccag cagaatgtgc tcgcgcgtct
     3781 gcggcatcgg gccgtcagca gcggagacaa cgagaatggc gccgtccatc tgagccgcgc
     3841 cagtgatcat gttcttgacg tagtcggcgt gacccgggca atcgacgtgg gcatagtggc
     3901 gtttgtcgct ggaatactcc acgtgtgccg tgttgatggt gattccacgc tctttttcct
     3961 ctggagcgtt atcaatc
//
LOCUS       DATDAJ010000155         4352 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_928623, whole genome shotgun sequence.
ACCESSION   DATDAJ010000155 DATDAJ010000000
VERSION     DATDAJ010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4352
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928623"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VIS53_03700"
     CDS             complement(<1..209)
                     /locus_tag="VIS53_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEY5766921.1"
                     /translation="MAFNIDLHTHSFFSGDGISSPEDMIAAARATGLHGIAITDHNTC
                     DAVNYLLQKGLMRLDGLPVDDFLVLP"
     gene            complement(265..2142)
                     /locus_tag="VIS53_03705"
     CDS             complement(265..2142)
                     /locus_tag="VIS53_03705"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5766922.1"
                     /translation="MSDAKAAKKKQSFWQTLRAASGPYRRLLGYIKPYKGRFIVGLLL
                     GFAYGGVSSLLPLAISRVTGTIFHGAAPNPTDLRSNLGALDTGPKINSVLLICLAIPA
                     IMTVRSLCSYGNTYCMQWVSNKVVTDIRGQLFNKMVRLSMDFFNKMRSGLLISRITNE
                     TRVVQMALTAVGSDIFKQPILIVGAISVLFLMDWKFTLITLVLFPTCLLPLRIYGSRA
                     RKALRGQFEGMGEMVVTMQETFAGIRVIKSFAREAHQEKEFKRSNQMQFSQMMRIIRS
                     MEATGPLVETIAAVGIGLALLYVYTANLSAGRFFGLISGIFLLYDPIKTLSKLQIVMQ
                     QSITATTAIFALLDTEPTVRDSPDATKLTSATGQIAFENVTFRYANTVTDAVSNLTLH
                     IEPGKTYALVGASGAGKSTILSLILRLYDPTSGAVKIDGRDLRSVTQKSLREQMGLVT
                     QETFLFHDTIFSNIQFGRLDATPEEVHEAARAAYAHDFIVAQPKGYETVIGDKGCLLS
                     GGQQQRLAIARAVLKNAPILLLDEATSSLDSESEQQIQKALAELATGRTVIAIAHRLS
                     TVLSADQIIVMDAGHIKEIGTHAELLEKSGYYRRLYDHQFNRIQDEPVVESAFAVEEL
                     V"
     gene            complement(2139..3161)
                     /gene="rfaQ"
                     /locus_tag="VIS53_03710"
     CDS             complement(2139..3161)
                     /gene="rfaQ"
                     /locus_tag="VIS53_03710"
                     /inference="COORDINATES: protein motif:HMM:TIGR02201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipopolysaccharide heptosyltransferase
                     III"
                     /protein_id="HEY5766923.1"
                     /translation="MKILLLQLKRIGDLILTTPAIAALRSSYPDTHITLAVSNECAEL
                     LPAISNVDRVLIARRNLRDVAMASSVAGKRFDYCIDFTRNDRSAFLTLLSGARRRVAS
                     YRVREQSKTRAKVYTDLVGVRVRDMHTIDYNLALLEPLSVRAGSSAPQLDLPRTAREK
                     ADRLRHEWKILRPYVILHPGSARPEKLWDAARWAEVIDHFGQDHEFDFVLTSGPAVDE
                     QTHVAAITQRTRQKFINLSGKTDLLTLAALVGQAQLLVTVDSAPVHFAAASHTPQVIL
                     FGPTNPFHWRPKDSPALILHGKSDAPVTEFAPVRPRFPMSEISTEAVIGAMDSLLPQH
                     AAARTS"
     gene            complement(3233..>4352)
                     /locus_tag="VIS53_03715"
     CDS             complement(3233..>4352)
                     /locus_tag="VIS53_03715"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5766924.1"
                     /translation="GSGLDTDAFETLRASFRGGFLGKAVAYDNRQREIPASFIHSLRW
                     HPVRLISFLDRPYYYGAKKKYLDWIASRQLATGRYDLFHSWSGDCLRSLQVAKRLGIP
                     SIVEIPTWHRDGGKQKIHQPDKPASTGDVPTFERWKNRLLLQRKRFVREYELADLLLV
                     LSDKAAHTFRVRGFPEEKLFYLPRGVDVERFKPGSPPETFRVVFAGALIKRKGIQHVL
                     EAWHRLNLSNAELWLVGFVHDEAKPFLKEFWRDNIRVVGFVRDPENYLSQGTIHVFPS
                     QWEGSAKVTYEAAACALPQITTREAGDVVRNGIEGIIVKPGDVNGISTALEHLYRHPE
                     IVKEMGTAARRRVVENFTWDHFRTRLLDAYETAMRMAR"
BASE COUNT         1014 a         1176 c         1195 g          967 t
ORIGIN      
        1 gggagaacga gaaaatcatc aaccggcaac ccatccagtc gcatcaagcc tttttggagc
       61 aggtaattga ccgcatcgca tgtgttgtga tcggtgatgg caatgccatg caaacctgtg
      121 gcgcgcgcgg ctgcaatcat gtcttccgga ctggagatac cgtccccgga aaaaaacgag
      181 tgtgtgtgca ggtcgatgtt aaatgccatt gcctaaaggg caggaacaaa caattgaaag
      241 aattaaatgg ttaaaaggtg gttgctagac cagctcctca acagcgaagg ctgactcaac
      301 gacaggttca tcctgaatac gattgaattg gtgatcgtac aatcgcctgt agtacccgga
      361 tttttcgagc agctcggcgt gcgtgccgat ctccttgatg tgacccgcgt ccattacgat
      421 gatttggtcg gcggacaaga cggtggataa gcgatgggca atggcgatta ccgtgcggcc
      481 ggtcgcaagt tccgcgaggg ctttctgaat ttgctgttcc gattcggaat cgagcgaaga
      541 agtcgcttca tcgagtaaca gaattggcgc gttcttcaga acagcgcgtg cgatagcaag
      601 acgctgttgc tggccgccgg aaagaaggca gcctttgtcg ccaattactg tttcgtaacc
      661 ctttggctgg gcgacaataa aatcgtgcgc ataggccgct cgcgcggctt cgtgaacttc
      721 ttccggcgtc gcatcgagcc gaccgaactg gatattgctg aagattgtgt cgtgaaacag
      781 aaacgtctcc tgcgtgacga gccccatctg ttcccgcaat gatttctgcg tcacggagcg
      841 caggtcgcga ccatcgattt ttacagcccc ggaagtcgga tcgtataaac gcagaatcag
      901 cgaaagaatt gtgctctttc ctgcgccgct ggcaccgacg agcgcatagg ttttcccggg
      961 ctcgatatgc aaagtcagat tgctaacggc atccgtgact gtgtttgcat aacgaaacgt
     1021 cacattttca aaggcgattt ggcccgttgc cgaggtcagc ttggtggcgt ctggcgaatc
     1081 tcgtacagtc ggctcagtat cgagaagagc gaaaatcgct gttgtcgcgg tgattgactg
     1141 ctgcattacg atttggagct tactgagtgt cttgatcgga tcgtagagaa ggaaaattcc
     1201 tgagatcagt ccgaaaaatc gtcccgcgct caggttcgca gtgtaaacat agagcaacgc
     1261 caggcctatc ccgacggcag cgattgtttc gaccagtggg cccgtagcct ccatggaccg
     1321 gataatgcgc atcatctgcg agaattgcat ttgattgctg cgcttgaatt ccttttcctg
     1381 atgggcttca cgcgcgaacg acttgatcac ccgaatgccg gcgaatgtct cctgcattgt
     1441 cactaccatt tcgcccatgc cttcaaactg accccggagc gcttttcgcg cgcggcttcc
     1501 gtagatgcga agcggcagca aacaggttgg aaaaagaacc agtgtgatca gcgtgaattt
     1561 ccaatccatc agaaatagaa cgctgattgc gcccacgatc agtattggtt gcttaaaaat
     1621 atcgctaccg actgcagtca aagccatttg cacgacgcgg gtctcgttgg tgatgcgcga
     1681 gattaggagc cctgaacgca tcttgttaaa gaaatccatc gagaggcgca ccatcttgtt
     1741 gaaaagctga ccgcgaatat ccgtgacgac cttgttgctt acccactgca tgcagtaggt
     1801 atttccgtag gagcataggc tgcgtacggt catgatcgct ggaatggcga ggcagatcag
     1861 aagaaccgaa ttgatctttg gccctgtatc caaagctcct aaattggagc gcagatccgt
     1921 tggattagga gcagccccat ggaaaatcgt gcctgtcacg cgggaaatcg cgagcggcaa
     1981 aagcgaactg actccgccgt acgcaaagcc caaaagcaaa cccacgataa aacggccctt
     2041 gtacggctta atgtagccga ggagccgccg gtacggaccc gaggctgcac gtaacgtttg
     2101 ccagaatgac tgtttcttct tagccgcttt tgcgtcgctc atgacgttcg ggccgccgca
     2161 tgctgcggca gcagcgaatc catagcaccg atcacggctt ccgtcgagat ttcgctcatg
     2221 gggaaacgcg gacggaccgg cgcaaactca gtcaccggcg cgtccgattt tccgtgtaaa
     2281 atcagtgctg gactgtcctt tggtcgccaa tgaaacggat tcgtcggccc gaacaggatt
     2341 acctgcggcg tatgcgaggc agccgcgaaa tgcaccggcg ccgaatcgac tgtcacaagc
     2401 agctgcgcct gcccaactaa ggccgccagc gtaagcaaat ctgtctttcc agagaggttg
     2461 atgaattttt gccgagtgcg ctgtgtaatt gccgcgacat gcgtttgctc atcaacggct
     2521 ggtccactcg tcaaaacaaa atcgaattcg tggtcttggc cgaagtgatc aatgacctct
     2581 gcccatcgcg cagcgtccca cagtttttct ggccgagccg agccgggatg caaaatcacg
     2641 taaggtcgca ggatcttcca ctcatggcga agcctgtcag ctttttcgcg cgccgttcgt
     2701 ggaagatcaa gctgcggggc ggaagaacca gcccggacgc tgagcggttc aagcaaagcc
     2761 agattgtagt cgatcgtgtg catatcccgc acacggactc caacaagatc ggtgtaaact
     2821 ttggcgcgtg tcttggactg ctcgcggacc cggtaggagg cgacccgtct ccgcgcacct
     2881 gacaagaggg tcaaaaaagc cgaacgatcg tttcgcgtaa agtcgatgca ataatcaaat
     2941 ctcttgccgg cgacagaaga agccatggcc acatcccgca ggttgcgtcg cgcgattaga
     3001 acgcgatcga cgttcgagat ggccggaagt agctcagcgc attcgttcga aaccgcgagg
     3061 gtgatatgcg tatccggata gctgctacgc agtgcagcaa ttgcaggcgt ggtcagaatc
     3121 agatcgccga ttcgcttgag ttgcaggaga agaattttca tcagccttta acaaggagcg
     3181 gcggttttca aaccgccgcg ggcgatctgg agatcgcccc ttcttgaaga gatcatcgtg
     3241 ccatgcgcat cgcggtttcg tatgcgtcca gcaatcgcgt tcgaaaatgg tcccaggtaa
     3301 aattctccac gacgcgacgt ctggcggcag tgcccatttc cttcacgatt tccggatgcc
     3361 gatacaaatg ctccagcgca gtcgagattc cattcacatc tccgggtttt acgatgattc
     3421 cctcaattcc attacgcacc acgtcgcctg cctcgcgcgt ggtgatctgc ggcaatgcgc
     3481 aggccgccgc ttcgtacgtg actttcgcgc tgccttccca ttgcgagggg aaaacgtgga
     3541 ttgtcccctg gctgagataa ttctccggat cgcgaacgaa gccgacaacg cgaatattat
     3601 cgcgccagaa ctcctttaga aatggcttcg cttcgtcgtg cacaaacccg actagccaca
     3661 gttcggcatt tgaaagattg aggcggtgcc acgcttcgag cacatgttga attccctttc
     3721 gtttgatcaa tgcgccggca aatacgacgc gaaatgtttc cgggggcgag cccggcttga
     3781 agcgctcgac atccaccccg cgggggagat aaaacagctt ttcctctgga aagcctcgca
     3841 cgcgaaacgt gtgggctgcc ttgtctgaca ggaccagcag cagatcagcg agctcgtatt
     3901 ccctcacaaa ccgcttccgc tggagcaaca gccggttttt ccatctctca aacgtcggaa
     3961 catcgcctgt cgatgctggc ttgtccggtt ggtggatttt ctgcttgcca ccgtcacgat
     4021 gccaggtcgg gatttcaaca atggatggga tgccgagtcg tttcgcgact tgcagcgagc
     4081 gcaggcaatc ccccgaccag ctatgaaaca gatcgtaacg accggtcgcc aattgccgtg
     4141 aagcgatcca gtcgagatat ttcttcttcg ctccgtaata gtaaggcctg tcaagaaagg
     4201 agatcagtcg taccggatgc catcgcagcg agtgaatgaa cgaagcaggg atctccctct
     4261 gccggttatc ataggcgacg gctttaccca gaaatcctcc gcgaaaggag gcacgtagcg
     4321 tttcgaatgc atccgtgtcg agaccagacc ca
//
LOCUS       DATDAJ010000156         7025 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_935670, whole genome shotgun sequence.
ACCESSION   DATDAJ010000156 DATDAJ010000000
VERSION     DATDAJ010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7025
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_935670"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            353..547
                     /locus_tag="VIS53_03720"
     CDS             353..547
                     /locus_tag="VIS53_03720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766925.1"
                     /translation="MNLGEPPLDKSAQSRVSNSVVVALLVIIGALVLLAAFANIQRFW
                     QHKVETVVIKAATAPTPEAQ"
     gene            complement(1061..3811)
                     /locus_tag="VIS53_03725"
     CDS             complement(1061..3811)
                     /locus_tag="VIS53_03725"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEY5766926.1"
                     /translation="MIEVRYERGVYLPQQDFWLDPWDAKRFAFVSHAHSDHIARHQEV
                     IVSEPTARLMRVRLPGLRIEHPLPFGDRRSVRSVDLMLLPAGHIFGSAQCLVFVGEET
                     LLYTGDFKLRPGKSAEQAEWRHADTLVMETTFGVPRYRFPPTKEVIDRMVAFCSDTID
                     ADEVPVLLGYSLGKAQEILCALEGAGLTPMLHGSVYQMTRIYEQLGQSFCKYLRYNRN
                     DVVGKVLICPPSANRSPMLEKIPRKRVAFISGWAVDPNTVYRYQVDAAFPLSDHADYD
                     DLLRYIELVQPRRVLTLHGFAAAFASDLRARGLEAWALTEENQMELHFGQRVIALQSL
                     PKNSAAAPSPCESTQQSEFLDFANVGQDIGATPAKLEKIRLLSDYLRRLTSEQLPIAT
                     TYFTGRAFAQNDPRILQVGWAVIFRALQDATKIGDSEFHGIASRHGDAGKSAFDVLDG
                     GTAPHPFTILESTELFQNLQRARGPIAKAKLLRERFSILSAREGEYVVKILTGDLRIG
                     LREGLVEEAISRAFDVSLEEVKQANMLLGDIGRTALLASRKELHSAELSIFRPIKCML
                     ATPEPTADAVWNRFIEVADRDRSDASIPGTVYVEDKFDGIRAQLHRSRDRVEIFSRDL
                     RRITGQFPELVDQARGFDQELIADGEIIAFDEGRRLTFFDLQKRLGRKDDTADLFAGA
                     AADVPVAFVIFDLLWMNGRSLLKTPLRDRREQLGTLVLPPKFQRAILTPAGSAAEIEQ
                     IFQDARQRLNEGLMIKDAESFYLPGARGMFWFKLKRELATLDVIVVAAELGHGKRNNV
                     LSDYTFAVRDETTGELLPIGKAYSGLTDVEIAELTEHFKQNTIADHGRYRRVNPNVVL
                     EVAFNSIQPSTRHASGLALRFPRIKAIRRDKNVDSIDTLQYARELAMQSANSPNSFGK
                     SA"
     gene            3920..4510
                     /locus_tag="VIS53_03730"
     CDS             3920..4510
                     /locus_tag="VIS53_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766927.1"
                     /translation="MRFAAALLILTFLVVSASGRSTREEPKVIEKITPLPVALDPNFE
                     FRKTKLFFMGEKGLKASERAHDSTNKVGGKSNSPNQKTSVLQDAPIVFERQYRLFGAV
                     TRVDQHQRFGDYFDFFWRTKRASDVTVRLEYRQEKLHEHVQAQEITYRNVRGTQKTEF
                     KVIGDDYFDDGRVIAWRCLLIANGRIVAENRSFLWE"
     gene            4659..5174
                     /locus_tag="VIS53_03735"
     CDS             4659..5174
                     /locus_tag="VIS53_03735"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEY5766928.1"
                     /translation="MDSSIQVGVRGPTVWVKVEGKGSFLNSGNLKEFSREMLDRGYRE
                     FVVDLADCAMMDSTFMGTMASVALRLKELGQGHLHIVHCGNRSQQLLSGLGLDQIFDI
                     HSDGTRAPECEALDQASRSHTLDSRKKEQTETMLEAHEALCDAAPENIFRFKDVLDFL
                     RQDLHHETSSK"
     gene            5189..6625
                     /locus_tag="VIS53_03740"
     CDS             5189..6625
                     /locus_tag="VIS53_03740"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing SpoIIE family protein
                     phosphatase"
                     /protein_id="HEY5766929.1"
                     /translation="MWPTLFLGLLVASLAGWGITAYLQSRQIRRLERSHEEIQVEETL
                     VFDFLHGLGEAFRGTIRPQELHRLIVEGAVRILDAHGGALYVADRTGGRLMPGFISKG
                     CPPLVDIPQDILQQAAANPITLETFLRLHVVSANEGLIGRVWQTGQAVCINEFSEAPE
                     LAKLRGSAFGSVSVAVTALQYGDQNLGVLAVANGPTGAPFSQADFVVFKSIAEQSAFA
                     LYNAIIYSMANEKKRLDHDLEIARDIQRILLPSEAPAINGFQISGINVPARQVSGDYF
                     DYIHVDEERLGVAIADVSGKGVPASLIMAICRSVLRAEAARNPSPADVLRKVNRQLYP
                     DIKEDMFISMAYLVLDHQHDGVTLARAGHDAPLLYQQQSQTVTPIKSPGMVVGIDSGS
                     VFDRLTVDFSVPLERNDCLVLYTDGVTETLNSEGDEYGVDRMTQSVRASANDGAQAIV
                     KRIIEDVREFTGSVPQNDDITVIAIRKT"
     gene            6622..>7025
                     /gene="grpE"
                     /locus_tag="VIS53_03745"
     CDS             6622..>7025
                     /gene="grpE"
                     /locus_tag="VIS53_03745"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY5766930.1"
                     /translation="MKKNPSREREEELNPSVQTRQPTPTVAADADSDDAMAGLQADLD
                     RFRDLALRSQADFDNYKKRAAREKEDAVKYANSSLLQRLVSILDNFELGLAAAKTEGT
                     QSPIYSGMVLVQKQLNDLLEENGLQAIEAEGK"
BASE COUNT         1641 a         1901 c         1950 g         1533 t
ORIGIN      
        1 ggaaaagcta gagccaagac atctggacgc gtctccgaat gaaagcgccg caaccgcaac
       61 gccggggggc tctaaggctt tggccaccag ttcgcccgcc gaacctgcga agaagccaga
      121 aaagacacac aaaggtgagc gaccgaggaa cagcgaacgc atcggaattg tctcaccatc
      181 tccttcagtc actccacgat gaacgcgagt gcttccatct ttattcgcgt aattctcgcc
      241 ggtgtcggga aaatcactgc cggcgattca agcgatcgcg tcatggtgga gtacggggtc
      301 actcctcgaa tgaggcagct tgcgcttatg agatcgactt cgatactgag gcgtgaattt
      361 aggcgagccg cctctcgaca aatccgcgca atctcgagtc tcgaacagcg ttgttgtagc
      421 gctgctcgtc attattggcg cactcgtcct tttggctgcg ttcgcgaata ttcagcggtt
      481 ttggcagcac aaagtggaga ctgtagtcat caaagctgcc acggcaccaa caccggaggc
      541 gcaatgactt tcatttgact agccattggc tttccgtttc ttcgccgaac aaccgaagac
      601 gcactgaaat tcattcctga catgaaaaag ctttttgtcc catcgatgct cgtctcgctc
      661 gtgatggttt gctcgtgcca aaaacaagat tcaactgctg aacaacaact cgctcaacgg
      721 aaaacggagt tggatgcccg agagcaagca ttgaacgaaa gagagaaagc attggcagaa
      781 cgacagaaat tggtcgttaa accgagaatt gctcccgctc ctcgaacagc ccccgttcct
      841 cgaatggctc ccgcggagcc tcagcagaca gttcctcgaa tagctcccgc gcagcctcag
      901 cagacgattc ctgctgattt ccaggacctc gtgggcaaga tggaagaact acaaaaaaga
      961 agggttcccg cgtcacgacg tagccaggca acggttcctg ctacagaaga agctgcttcg
     1021 ccgaatccgt cgtctacgcc agagtagttt tgagacctgg ttaggcgctc tttccgaaag
     1081 agttcggtga gtttgccgac tgcatggcaa gctcgcgcgc gtattgaagg gtgtcgatgg
     1141 aatcgacgtt cttgtcgcgt cggatcgcct taattctggg gaaacgcagt gcgagtccgc
     1201 tggcgtggcg agtgctgggc tggattgaat tgaaagccac ctcgagcacg acattcgggt
     1261 tcactctgcg atagcggccg tggtcggcta ttgtgttttg tttaaaatgt tccgttaact
     1321 ctgcgatctc tacatcggtc aatccgctgt aggctttgcc gattggcaag agttcgccgg
     1381 tggtttcgtc gcgcaccgcg aacgtatagt cgcttagcac attgttgcgt tttccatggc
     1441 caagctccgc cgcgacaaca atcacatcca acgtcgctaa ttcgcgtttc agtttgaacc
     1501 aaaacattcc gcgggcgccg gggagataaa agctttcagc gtctttgatc atcaaacctt
     1561 cattcaaacg ctgacgcgca tcctggaaaa tttgctcaat ttccgcggca gaacccgctg
     1621 gcgttaagat cgctctctga aatttgggcg gcaatacgag cgtgccgagt tgttcgcgcc
     1681 ggtcacgaag cggggttttt aagagggacc gtccgttcat ccagagaaga tcgaaaatca
     1741 caaaagcgac cggcacatcc gctgccgctc cggcaaacag atcagcagtg tcgtccttgc
     1801 gcccaagtcg cttctgcaga tcgaaaaagg tcagtcgccg gccttcgtca aaagcgatga
     1861 tttcgccgtc agcaatcagc tcctggtcaa accccctggc ttgatcgacc agctccggaa
     1921 attgcccggt aattcttcgc aaatcgcgcg agaaaatctc gaccctgtct ctgctgcgat
     1981 gaagctgtgc acgaatccca tcaaatttgt cttcaacgta cactgtccct gggatcgatg
     2041 cgtcggaccg gtcgcggtcg gccacttcaa taaagcggtt ccagaccgca tccgcggtcg
     2101 gttctggagt ggcgagcatg catttaatag gacgaaatat tgatagctcg gcactgtgca
     2161 gctcttttcg tgaggccagc agcgccgtgc ggccgatgtc gcctaacaac atgttggcct
     2221 gttttacttc ttcgagcgaa acatcaaatg cccgggagat ggcctcctcc accagaccct
     2281 cgcgcaagcc gatgcgcagg tcgccagtca aaatcttgac cacgtactcg ccttcacgcg
     2341 cggataaaat cgaaaatcgc tctcgcagca gttttgcctt ggcgatcggt ccgcgcgcgc
     2401 gctgaagatt ttggaacaac tcggttgatt cgagaatggt gaaaggatgc ggcgccgttc
     2461 cgccatcgag gacgtcaaac gcactcttgc cagcgtcgcc atgtctgctg gcgattccat
     2521 gaaactccga atcgccgatt ttcgtcgcgt cctgcaacgc gcggaagatt acggcccatc
     2581 cgacctgcaa tatgcgcgga tcgttttggg caaatgccct tccggtgaag tacgtagtcg
     2641 caatcggaag ctgctcactt gttagtctgc gcaggtaatc ggacagcaac cgaatcttct
     2701 ccagtttcgc cggagtcgca ccgatgtctt gaccgacatt cgcgaaatcc agaaattcag
     2761 attgctgggt agactcgcag ggagacggcg ctgctgcgga atttttcggc agggattgca
     2821 gtgcgatcac cctttgtccg aaatgcagtt ccatctggtt ttcttcagtc agcgcccatg
     2881 cctcgaggcc gcgtgcgcga agatcggagg caaaagctgc cgcgaaacca tggagcgtca
     2941 atactcggcg cggctgcacc aattcgatgt accgaagcaa atcgtcataa tccgcgtgat
     3001 ccgatagagg aaatgccgca tcgacctggt agcgatacac cgtgttcgga tcgacagccc
     3061 atccactgat gaacgctaca cgtttgcgcg ggatcttctc cagcatgggc gagcggttcg
     3121 cgctgggcgg acagatcaac actttgccga caacgtcgtt ccggttgtat cgcaggtatt
     3181 tgcaaaacga ttgccccagc tgttcgtaga tgcgcgtcat ttgataaacc gagccatgca
     3241 gcatgggggt caaaccggcg ccctcgagcg cgcaaaggat ttcctgcgcc ttccctaatg
     3301 agtatcccag cagcaccggc acctcatctg cgtcaattgt gtcgctgcag aacgcgacca
     3361 tgcgatcgat cacctctttg gtgggcggga accgatagcg cggcacgccg aaggttgttt
     3421 ccatcacaag ggtgtcagca tgacgccact ctgcctgctc ggcggatttg ccgggacgca
     3481 gcttgaagtc gccagtgtag agcagcgtct cctcaccaac gaaaacaagg cactgcgctg
     3541 aaccaaagat atgcccggca ggtaacaaca tcagatcgac gctacgaaca gatcgtctgt
     3601 ccccaaatgg caatggatgc tcgatgcgca aacccggcag acggacccgc atgaggcgtg
     3661 cagtgggttc ggaaacgatc acctcctggt gccgcgcgat gtggtcactg tgggcgtggg
     3721 aaacgaacgc gaaacgtttt gcgtcccacg ggtccaacca gaaatcctgt tgcggcaagt
     3781 aaacaccccg ctcgtagcga acttcgatca cgcagaaaat tacttcgcaa tttgcgtgag
     3841 ttccatagca tgcgtgatac ggagcagcac cgccgggttg cacgttgaca cccgcctcaa
     3901 tgagccgctt aattatggaa tgaggtttgc cgctgcactt ctaattttga cgttccttgt
     3961 cgtttccgcc tccggcagga gcacacgtga agaacccaaa gtcatcgaga aaatcacgcc
     4021 gctgccagtg gcattggacc caaatttcga gtttcgaaaa accaagctct tcttcatggg
     4081 tgagaagggg ctaaaggcga gtgagagggc acacgattcg acgaacaaag ttggcgggaa
     4141 atcaaattcg ccgaaccaga aaacttctgt gcttcaggat gcgccgatcg tttttgagag
     4201 gcaataccgt cttttcggcg cagtcacaag ggtcgatcaa caccagcgtt tcggtgatta
     4261 cttcgatttt ttttggcgga ccaaacgtgc gtcggatgtc accgtgcgtc ttgaatatcg
     4321 ccaggagaaa ttgcacgaac acgtccaggc gcaggagatc acatatagaa acgtgcgcgg
     4381 cacgcagaag actgaattca aggtgatcgg cgacgattac tttgatgacg gccgcgtgat
     4441 tgcgtggcga tgtctcttaa tcgcaaacgg ccgaatcgtg gcggaaaacc gctcgtttct
     4501 gtgggaataa tggcgcaggg aggcgcgccc tgcctcgaag actcgaagcg atgcggctca
     4561 ttaagaactg cggtccgaat cagttgatga gggatttccc acgcgcgggc aggtttgaca
     4621 gcatgggttt cgggctggta tcgtttgaaa gagtaactgt ggactcatct attcaagttg
     4681 gggtaagagg gccgaccgta tgggtgaaag tggagggaaa aggtagtttc ctcaatagcg
     4741 gcaacctcaa ggagttctcg cgcgaaatgt tggaccgcgg gtatcgcgaa tttgtggtag
     4801 atctggccga ttgcgccatg atggattcga cgtttatggg aactatggcc agcgtggcgt
     4861 tgcggctaaa ggaactcggg cagggccacc ttcacattgt tcattgcggt aatcgcagtc
     4921 agcaacttct ttccgggctc ggattggatc agatattcga tattcacagc gatggcactc
     4981 gtgcacctga atgtgaagcg cttgaccaag cctccagaag ccatacgctg gattcccgaa
     5041 aaaaggagca gacagaaacc atgctcgaag cgcacgaagc gctttgcgac gcggctcccg
     5101 aaaatatctt tcgctttaag gacgttctcg atttcctcag acaagatctt catcacgaga
     5161 cgtcttccaa gtaagctggc ctcgcgcaat gtggccgact cttttcctag gactgcttgt
     5221 cgcgtctctg gccgggtggg gtatcaccgc ctatctccag agccggcaaa ttcgcagact
     5281 ggaacgctcg catgaggaga ttcaggtcga ggagacgctc gtcttcgatt tcctccacgg
     5341 gttgggcgaa gcattccggg gaaccattcg gccgcaggaa ttgcatcgac tcatagtgga
     5401 gggggcggtg cgtattctcg atgcacacgg cggcgcgctc tacgtcgcgg accggacagg
     5461 tggcaggctc atgcctggat ttatatcgaa aggctgtccg ccactggtag atatcccgca
     5521 agatattcta caacaggcgg ctgccaatcc cattaccctt gagaccttcc tgcggctcca
     5581 cgtggttagt gcgaatgaag gactgattgg gcgcgtttgg caaacaggtc aggctgtttg
     5641 tatcaacgaa ttctcggaag cgccggagtt ggccaaattg cgaggaagcg cttttggcag
     5701 cgtgtcggtc gcggtcacgg cgctccagta tggcgaccaa aacctcggtg ttctggcggt
     5761 ggccaacggt ccaacgggtg cccccttttc gcaggctgat tttgtcgttt ttaaatccat
     5821 cgccgagcaa tcggcctttg cgctctacaa cgcgatcatt tattcgatgg cgaacgaaaa
     5881 aaaacggctg gatcacgacc tcgaaatcgc gcgagacatt caacgcattc tgctcccatc
     5941 agaagcgccg gccatcaatg ggttccagat cagcgggatc aatgtgccag ctcgccaggt
     6001 aagcggtgat tatttcgatt acattcacgt cgatgaagag cgactgggcg ttgcaatcgc
     6061 agacgtttcc ggcaaaggcg tgcctgcatc gctaatcatg gcgatttgcc gcagcgtgtt
     6121 gcgcgcagag gccgcccgga acccgtctcc ggcggatgta ttacgaaaag taaaccggca
     6181 gctttatcca gacattaagg aagacatgtt catcagcatg gcgtacctgg tgctggatca
     6241 tcagcacgat ggcgttacgc ttgcgcgggc cggacacgac gcgccgttat tgtatcagca
     6301 gcagtcgcaa actgtaacgc cgataaagtc gccgggaatg gtggtgggaa ttgacagcgg
     6361 aagtgtgttc gataggctta ccgtcgattt ttcggtaccg ctcgagcgca acgattgcct
     6421 cgttctctac accgacggtg tgactgagac gcttaactcc gagggagacg agtatggcgt
     6481 tgatcgcatg acgcagtcgg ttcgcgccag cgcgaacgat ggcgcgcaag cgattgtaaa
     6541 aaggattatc gaggacgtgc gcgagtttac cggttcggtg ccgcaaaacg atgacattac
     6601 cgtgatagcc atccgcaaaa catgaaaaaa aacccttccc gtgaacgcga agaagaattg
     6661 aatccgtcag tgcagacgag gcagcccact cctacggttg cagccgacgc cgattccgac
     6721 gatgcaatgg ccgggttgca agccgatctc gaccgattcc gcgatctcgc gctacgcagc
     6781 caggctgatt ttgacaacta caaaaaacgc gctgcccgcg aaaaagagga tgcggtgaaa
     6841 tacgccaaca gctcgctgct ccagcgtttg gtctcaattc tcgacaattt cgagcttggt
     6901 ctggcggccg caaaaacgga gggcacgcaa tctccgatct attccggaat ggttctcgtt
     6961 caaaaacagc taaacgattt gcttgaggaa aacggattgc aagcgatcga agccgaaggc
     7021 aaaaa
//
LOCUS       DATDAJ010000157         5800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_938802, whole genome shotgun sequence.
ACCESSION   DATDAJ010000157 DATDAJ010000000
VERSION     DATDAJ010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5800
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_938802"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1888
                     /locus_tag="VIS53_03750"
     CDS             <1..1888
                     /locus_tag="VIS53_03750"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5766931.1"
                     /translation="GTWRDLTDNVNRLAANLTTQLRAIADVATAVTKGDLTRSIQVEA
                     QGEVAFVKELINEMIRNLRDTTLRNEEQDWLKTNLTGFTRMLQGQRDFLTVGKLILAE
                     LAPLVSAQQGAFYIVDPPNGENELKLLAGYAQHEANGAKDRFKVGEGLVGQAALEKRR
                     ILLTDVPGNYAKISSGLGEFHPMNVVVLPILFEGEVKAVMELSSVERFSPAHQAFLDQ
                     LTESIGIVLNTIEASTRTENLLKQSQSLATELQKTNLELEEKARSNLAKDQFLAMLSH
                     ELRTPLTPVLASALELENEPDVRPDVRESLQMIRRNVELEARLIDDLLDLTRIDQGKV
                     QLNFEVVDADKLLQNALEICQPEIDRKNLRPSLNLSAKRVHMRADPARLQQIFWNLIN
                     NAVKFTPPNGQITITTTNDSGEKLRVEIADSGMGIEPEALPKIFDAFEQGGRTQLGGL
                     GLGLAISKTLVEAHKGTITAQSDGRNKGSKFALVFPTCEKVETQIAPALSPRFAERQP
                     MRILLVEDHEDTNRSLTSLLRRRGYHVRSALTFQSALELSAKEKFDVLISDLGLPDGS
                     GIDLIQKLVSKPPLGIALTGFGMEQDIRKSREAGFHHHLVKPIDLNKLDSLIQEGAAS
                     LSTV"
     gene            2178..2948
                     /locus_tag="VIS53_03755"
     CDS             2178..2948
                     /locus_tag="VIS53_03755"
                     /inference="COORDINATES: protein motif:HMM:NF020442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FRG domain-containing protein"
                     /protein_id="HEY5766932.1"
                     /translation="MKKNKPYRAEPICSWDEYSDKVAALCDGWAFRGHADSTWPLMST
                     LGRYLNAYVKEEYWMVQEERIARIFQRKAHLFLTHIPERSDTFQWLALMQHHGAPTRL
                     LDFTWSPYVAAFFALVHTTRQAAVWAVNPKRLVNVTEGLNDFLGDSRAGLIGIGEPFV
                     MNTRLIAQSGTFIVTKQVGTPIEHIVVAYEDPKDTLVKFELPAELIRPPGMRALFMMN
                     ITNATLFPDLDGLARSLAYELEFHWAHDPRKVLSHPNK"
     gene            3026..3098
                     /locus_tag="VIS53_03760"
     tRNA            3026..3098
                     /locus_tag="VIS53_03760"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3059..3061,aa:Ile,seq:cat)
     gene            3152..4723
                     /locus_tag="VIS53_03765"
     CDS             3152..4723
                     /locus_tag="VIS53_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766933.1"
                     /translation="MGRFALIFFEITLLSALILATRCANYKDVFVAGNVYFVDADCYA
                     RMTRAQMVREKPGLIIRHHAFENFPQGTTPHTTAPLDYLIVALSLLLDPFTAHPLDLA
                     GAFASPLLALLGGWFLWWWSVKFRYRWVMLILYAISPILVHGTELGRPDHQSLLILLV
                     AIAICAGWSSRSLQTANMASAWWLTSAAAWALAIWVSAYEPLVLFLIVTATALVMNRR
                     AVFARDRRAGWILFAAIIAIAFAIEWRIPSFAILQSTAHLKNWGSTIGELAHVSPMNP
                     VWLNWCGYLLLITPILIWMGIRTRTDVAPGGRALPIYVFLVATYLLTVWQARWGYFFV
                     LIFALALPALLVPIKSGVAVWVAVALSMLPILRDWDERLWPNEAQLAKRIEKRIESAQ
                     IRDLALSLRSPTVHPFLAPWWLSPSIAYWSRQAGVAGSSHESFNGIEDSARFFLSENL
                     QKAREILEKRHVAWVFAYDSDRVAQNSAGILNEPLPREPLCRVLDRTPSHAPPFLVFS
                     AQTPACKLYGVAVER"
     gene            4948..5358
                     /locus_tag="VIS53_03770"
     CDS             4948..5358
                     /locus_tag="VIS53_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY5766934.1"
                     /translation="MADHGGKDILSSDVEIKGSIKFQKELLIDGKVEGDINSDGVLTV
                     GENAEIRGEIKTKSITVYGKVHGNITVGERCELKSKCVLQGDLKAARLVIEEGATFIG
                     KSEVTTGAVSAKAAPRPEVVRPSEPIKAAFGVRA"
     gene            5383..>5800
                     /locus_tag="VIS53_03775"
     CDS             5383..>5800
                     /locus_tag="VIS53_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766935.1"
                     /translation="MANPSPAKVSAECPHCGFKQMEYAAAKSSLCRQCGRSFTPFVPK
                     PALKLRTTEEAPAPETSSSIFGKLEDFWKRQTSSVVECFECKRKQEVSGAATSTICPS
                     CSAHIDLRDYKITSGFSRSIRTRGNVHLSGKGDLASS"
BASE COUNT         1364 a         1541 c         1569 g         1326 t
ORIGIN      
        1 ggggacatgg cgtgatttga ccgacaacgt gaaccgactg gcggcaaatc tcaccacgca
       61 gcttcgcgct atcgctgatg ttgctacggc agtcaccaag ggcgatctca cgcgatcaat
      121 tcaagtggag gcccaaggcg aggtcgcgtt cgtcaaagaa ttgattaacg aaatgatccg
      181 aaacctgcgt gacacaacgc tgcgcaacga ggagcaggat tggctgaaaa ccaatctcac
      241 gggatttacg cggatgctcc agggacagcg cgattttctc actgttggca aactgatttt
      301 ggcggagctg gcgccgctgg tgtcagcgca gcaaggcgca ttttacatag tcgaccctcc
      361 caacggagaa aatgagctca aactacttgc cggctatgct caacatgagg cgaatggcgc
      421 aaaagaccga ttcaaggtag gcgagggcct ggtcggccaa gcggccttgg aaaagcggcg
      481 cattctttta accgatgtgc caggcaatta cgcgaagata agttccggcc tgggagagtt
      541 tcacccaatg aacgtggtgg tgctgccgat tcttttcgaa ggcgaagtca aagcggtcat
      601 ggaactttcc tcagtcgagc ggttcagccc cgcgcaccag gcatttctgg atcaattgac
      661 cgagagcatc ggcatcgtgc tcaatacgat cgaagcaagc acgcgaacag aaaacctgct
      721 caagcagtcg caatcgttgg cgaccgagct acaaaaaacc aacctggaac tggaagagaa
      781 ggcgcgctcg aatctggcca aagatcaatt cctggccatg ctgagtcacg agttgcggac
      841 gcctctcacg cccgtgcttg cttccgctct cgagctggag aatgagccgg acgtccgtcc
      901 ggacgttcgc gaatcgctgc aaatgattcg tcgtaacgtg gagttggaag cgcgactcat
      961 cgacgacttg ctggatctga cgcgtatcga tcaaggcaag gtgcagctca actttgaagt
     1021 cgtcgatgcg gataagttgc tgcaaaacgc cctcgaaatt tgtcagccgg aaatcgatcg
     1081 aaaaaatttg aggccatccc tcaatctcag cgcgaaaaga gtgcatatgc gtgcagaccc
     1141 ggcgcgactg cagcaaattt tttggaatct gatcaacaac gcagtcaaat tcacgccgcc
     1201 aaacgggcaa atcacgatta cgaccaccaa cgattcaggc gaaaaattgc gcgtcgagat
     1261 tgccgatagc gggatgggaa ttgagccgga agcgctaccg aaaatcttcg atgcattcga
     1321 acaaggcggc cgaactcaat taggaggact gggtcttggg ctggcgatca gcaaaactct
     1381 tgttgaagcg cataaaggaa cgattactgc gcaaagcgac ggccgaaata aaggttcgaa
     1441 gttcgcatta gtttttccca cctgcgaaaa agtggagacg caaatcgccc cggcgctgtc
     1501 gccgcggttc gccgaacgcc agcccatgcg gattctgctg gtcgaagatc acgaagacac
     1561 caatcgctcc cttacgagtc tgcttcggcg gcggggttat cacgtgcgat cggcactcac
     1621 ttttcaatct gccctcgagc tcagcgcgaa agagaaattt gatgtgctga tcagcgacct
     1681 gggtttaccc gatgggagtg gaatagatct gatccagaag ctcgtctcga aaccgcctct
     1741 cggaattgct ctcactggtt tcggaatgga acaagatatc cgcaaaagcc gcgaggcggg
     1801 tttccaccat cacctggtaa aaccgatcga cctgaataag ctggactccc tcattcaaga
     1861 aggggccgca tcgttgtcga ccgtctgacg acttgaatcc ttcaaacgtc agcgcgggcc
     1921 gatagatttt cttcaatcct gttcatcagt tcgcggctga gacatggtag aaactcatcc
     1981 agctttcttg aaattgtcga tgactttcca gtacctcatc cggaccgatt ctgggtgttt
     2041 ttttcttcac acagcaatgg aaaaatgcta acgcacggac gcggctcagg aaactttggt
     2101 ggcaagactt gtatccgcag tcagctcatt agatgaccgt ctcgtaactc accggatctt
     2161 agacgtacgt cctggcgatg aaaaaaaaca aaccataccg agcggagcct atctgctcat
     2221 gggatgagta cagtgacaag gtcgctgccc tatgcgacgg ctgggcgttt cgcggtcacg
     2281 ccgattccac ttggcccttg atgagtacgc tcggacggta tctgaacgca tacgttaagg
     2341 aagagtattg gatggtccag gaagagcgaa tcgcgcgtat cttccagaga aaggcacacc
     2401 tgttcctgac gcacattccg gaacgctcag atactttcca atggcttgcg ctgatgcaac
     2461 accacggtgc ccctacacgt cttctggatt ttacctggtc tccctacgtc gccgctttct
     2521 tcgcattggt acacacgacg aggcaggcgg ctgtttgggc cgtgaacccg aagagactgg
     2581 tcaacgtcac cgagggactg aacgatttcc tgggagactc ccgggccggt cttattggca
     2641 tcggtgagcc attcgttatg aatacgcgtc tcattgcgca atctgggacc ttcatcgtca
     2701 cgaagcaggt aggcaccccc attgaacata tcgtcgtagc gtacgaagat cccaaagaca
     2761 ccctcgtgaa atttgaatta cctgcagagt tgatcaggcc acctggtatg cgggcactct
     2821 ttatgatgaa cataacgaat gcgacgctct tcccagatct cgacggactc gcacgatcgc
     2881 ttgcgtacga actggagttt cactgggcac acgatcctcg aaaggttcta tcgcatccga
     2941 acaaatagta ggatgctgaa tcaaatctct cgatatctta acgaggcgaa cttctttttc
     3001 actgcggtaa tttatctacg aaaatgggcc tgtagctcag cggttagagc aggggactca
     3061 taatcccttg gtcccaggtt cgaatcctgg cgggcccatt tagttttcga ttttcgatcg
     3121 tcgatttgta attgtcgatc ctgtgcaacg cgtgggacgt tttgcgttga tctttttcga
     3181 gatcacgctc ctcagcgcct taatcctggc gacacgctgc gcgaattata aggatgtttt
     3241 tgtcgctggg aatgtttact tcgtcgatgc ggattgttac gcgcgcatga cgcgcgcgca
     3301 gatggtcagg gaaaagcccg gcctgatcat ccggcatcat gcgtttgaga attttccgca
     3361 gggcacgacc ccgcacacga ctgcgccgct ggactatctc atcgtcgccc tgtcgctttt
     3421 gctagatccg ttcacggcgc atccactcga tctggcaggc gcgtttgctt cgccattgct
     3481 cgcgctgcta ggaggctggt ttctttggtg gtggtccgta aaattccggt atcgctgggt
     3541 aatgctgatt ttgtatgcga tcagccccat cctcgttcac ggcacggagc ttggcagacc
     3601 tgatcatcaa tcgttgctga tcctgctggt cgcgatcgcg atttgcgcag gctggagctc
     3661 gcgaagtctg cagaccgcca acatggcgag cgcttggtgg ctcaccagcg ctgccgcctg
     3721 ggcgctggcg atctgggttt cggcttacga gccgcttgtg ctgtttctga tagtgacggc
     3781 cacggctctt gtgatgaatc gccgcgcggt tttcgcgcgt gatcgtcgcg cgggatggat
     3841 tttgttcgca gcgataattg ccatcgcatt cgcaatcgag tggcgtattc cgtcattcgc
     3901 gatccttcag tccaccgcgc atttgaaaaa ttggggaagc accattggag aactcgcgca
     3961 cgtttcaccg atgaatccag tctggttgaa ctggtgcggg tatctactgt tgatcacgcc
     4021 cattttgatc tggatgggta ttcgaacgcg gacagatgtc gcgcctggcg gtcgcgccct
     4081 accaatttac gtttttctcg tcgccacgta tttgctcacc gtctggcagg cccgttgggg
     4141 atattttttt gttttgatct ttgcgcttgc gcttccggca ttgctcgtgc cgatcaaatc
     4201 aggcgtcgca gtctgggtcg cagtcgcgtt atcgatgtta ccgattttgc gagactggga
     4261 cgaacggctt tggccaaacg aagcgcaatt ggcaaagcgc atcgaaaaac ggattgaatc
     4321 ggcgcagatt cgcgatcttg cgctcagttt gcgatcgcca acggtgcatc cgtttcttgc
     4381 accatggtgg ctttcacctt cgattgccta ttggtccagg caggctggag tcgcgggaag
     4441 ctcgcatgag agttttaacg ggatcgagga cagcgcgcga ttttttcttt cggagaattt
     4501 gcaaaaagca cgcgagattc ttgaaaaacg gcacgtggcg tgggttttcg cctacgattc
     4561 cgatcgcgtg gcacaaaatt ccgcgggcat cctgaacgag ccgcttccgc gggaaccgct
     4621 ctgtcgcgtt ttagatcgaa cgcccagcca cgcgccaccg ttcctcgttt tttctgcgca
     4681 aactccggca tgcaagctct acggagtggc tgttgaacga taaaacgata aaaaactttt
     4741 cacttagaaa gagaatccgt tgacaggcat cggcgagtgt cacattacta ccagatgctc
     4801 aaaagattcg tccctcaaaa gccggcgccc ccgattcgag aagaactgcg gactccggtt
     4861 ccagatgaga ataatcatct tgcgagtcgc gaagaggcac caccaaaacc aaacataatc
     4921 gataatccaa atccaaaacc taatcctatg gcagaccacg gaggcaaaga cattctctcg
     4981 agcgatgtcg aaattaaagg ctcgatcaag ttccaaaagg aactactcat cgatggcaaa
     5041 gtcgaaggcg acatcaactc tgacggcgtt ttgacggtcg gtgaaaacgc tgagattcgg
     5101 ggtgagatca aaaccaaatc gatcaccgtc tacggcaagg tgcacggcaa tatcacagtt
     5161 ggcgagcgct gcgaactgaa atccaaatgc gtgttgcagg gagatctcaa agcggcgcgt
     5221 cttgtaattg aagagggcgc aacttttatc gggaaatcgg aagtcaccac cggtgccgtt
     5281 tccgcaaaag ctgcaccgcg tcctgaagtt gtgcggccca gcgagccgat caaggcggca
     5341 ttcggagtgc gcgcgtaaaa gaaaggtttc ggcaagcata cagtggccaa tccatcgcct
     5401 gcaaaagtca gtgcggaatg tccgcactgc ggcttcaagc agatggaata cgcggcggcc
     5461 aagagttcgt tgtgccgcca gtgcggccgc tcttttactc cgttcgtacc gaaaccggcc
     5521 ctgaagctgc ggacgaccga agaagcgcct gcgccggaga cttcctcatc tatcttcggc
     5581 aaactcgagg atttttggaa gcgtcaaacc agttcggttg tcgagtgttt cgaatgtaaa
     5641 cgcaaacagg aagtttctgg cgccgcgaca tcgacaatct gtccgtcttg cagcgcgcac
     5701 atagatctac gcgattacaa aatcaccagc gggttcagtc gaagcattcg cacccgcggc
     5761 aatgtacatc tttccggcaa aggtgatctt gccagcagta
//
LOCUS       DATDAJ010000158         4117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_939960, whole genome shotgun sequence.
ACCESSION   DATDAJ010000158 DATDAJ010000000
VERSION     DATDAJ010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4117
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_939960"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1649
                     /locus_tag="VIS53_03780"
     CDS             <1..1649
                     /locus_tag="VIS53_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5766936.1"
                     /translation="EAQQIELDQTLTELRKFLNADLDPAEIDRQADIPRSVIDGLGQI
                     GVLGMTAPKEYGGHGFSQMANCKVLEEIGRRCASTSVFVNAHHSIGIRALLLFGTHEQ
                     NQKWLPKLVTGEQLGAFALTEREAGSDAANVQMQARPSEDGSHFILNGEKRYITNAAI
                     AHELTVMARTPVPGSDKTAVTAFLVTPDMPGFEMLEARMPKTGIKGTATGRFALRDVK
                     VPKENILGPIGKGLKVALTVLDFGRTTFGACCTGAAKTCLELAVAHANTRRQFSKTLG
                     EFELVKKKIARIAADAYAMEAMTTVTASFIDRGLEDYMLETAMLKVFTTERLWECIND
                     VFQIYGGSAYFTDLPLERMLRDARINQIGEGANEVLTSFIALVGMRGPGMEFKEIYDT
                     MMKPSRNGMSKAWVAGKNRLSATVLVPDVPVQSEQLRAQARQLGRLIRHFNFAVNRAL
                     ITYREPILDMQLVQERIANAAMDLFASTCVLSRIDGEIQFAGRNGNAVSPDHSAADLF
                     LRQSFRRIRGFLAGLTDNDDKAVIAAAKSCLTSGSARTAA"
     gene            complement(2171..>4117)
                     /locus_tag="VIS53_03785"
     CDS             complement(2171..>4117)
                     /locus_tag="VIS53_03785"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5766937.1"
                     /translation="ELYIELGNAPEARQLLEQLQPVSVAERRERRVLRGRLELISHRP
                     ERAIEMFAAILKRPEGTPHPILLAALFGIAEAHLQLKTPETGDDVLERFIDRNHADPD
                     LPLLFAKLDELYRAEYKPSRNELEKWVRRPEQPRRTFARWYLARLEIRAGRRERARQL
                     FTDLRQTEIKTPTIAPALVEFAEFEINDGLFDEAIAILDDARLLRPDPALLTRIDFSS
                     ARAQYSARRFETAIASFEQIAQRDSRWAKAALFNASSGWLQVGNHTRFVADYNQLEKQ
                     GGDEQSRADLQLEEGLMQAAKGDKKAATSLQRFIRDFPKNPRVSEAWVALAELAFHSS
                     SPRLDEARKDLDHAVESSPTAAAAQRADYLRIWVEEAAGGNESNVIELGKRFLEQHGA
                     SQFAREVRMKLAELYYRRQDFANAQTQFEIIAQQNPNDPLTEKALFFAAESAMSSMSE
                     HTLDRALVLFDQVVQKNGAMRWAARNEQAVIERKLGKPKDALALYDEVLKSDAGASEK
                     REALCGKGDIFFEAGATDPSSYQRAIEAYDQLAADKEGSIHWRSQALFKKGLCLEKKG
                     DRAGALATFYKILEDESRPGERRELFWYYKAGFNAARLLEEDSKWESAVAIYDKLVAA
                     GGGRSEEAKARLNNIRLEHFLWTD"
BASE COUNT          897 a         1133 c         1157 g          930 t
ORIGIN      
        1 cagaggcaca acagatcgag ctggatcaaa cgcttactga acttcgcaaa tttttgaatg
       61 cagatctcga tcctgcggag atcgatcggc aggcagatat tccgcgcagt gtgatcgatg
      121 gattggggca aatcggcgtg ctcggcatga cggcgccaaa ggaatacggc gggcacgggt
      181 tctcacagat ggccaactgc aaagtgctgg aagaaatcgg gcggcgttgt gcgtcgacat
      241 cggtttttgt taatgcgcat cactccattg ggatccgggc attgctgttg ttcggcacgc
      301 acgaacaaaa ccagaaatgg cttcctaaat tggtaactgg cgagcaactc ggcgcgttcg
      361 cgctcaccga aagggaagcc ggatctgacg cggcaaacgt gcaaatgcaa gcgcgtccca
      421 gcgaggacgg ttcgcatttc attttgaacg gcgagaagcg gtacatcacg aacgctgcga
      481 ttgcgcatga gctcacggta atggcgcgca ctcctgtgcc cggctcggat aaaactgctg
      541 tcactgcgtt tctggtgacg ccggacatgc cgggtttcga aatgcttgag gcacggatgc
      601 ccaaaacggg aatcaaaggc acggccactg gccggttcgc gttgcgtgac gtcaaagtac
      661 caaaagaaaa tattctcggc ccgataggca aaggtctgaa ggttgcgctg acggtgctcg
      721 attttggacg taccacattc ggcgcgtgct gcacaggcgc agccaaaacc tgtttggaat
      781 tggcagtcgc gcacgcgaac acccgcagac aattcagcaa gacgctgggc gaattcgagt
      841 tggtgaaaaa gaagatcgca cggatcgcag ctgacgctta cgccatggaa gcgatgacca
      901 cagtcacggc gtcgttcatc gaccgcggcc ttgaggatta catgcttgag acggcgatgt
      961 tgaaagtgtt cacgaccgaa cggctctggg aatgtatcaa cgacgtgttc cagatttacg
     1021 gcggctcggc gtacttcacc gatctgccgt tggagagaat gttgcgggac gcgcggatta
     1081 accaaatcgg cgagggggcg aatgaagtgc tcacttcgtt catagcgcta gtcgggatgc
     1141 gcggaccggg aatggagttc aaagaaattt acgacacgat gatgaagccg tcgcgcaatg
     1201 gaatgagcaa agcgtgggtg gccggaaaga accgcctcag cgcaaccgtt cttgtgcctg
     1261 acgtgcccgt gcaaagcgaa cagcttcggg cgcaggcgcg gcaactgggc cggttgatcc
     1321 ggcattttaa ttttgccgtt aatcgcgcgt tgatcaccta tcgtgagccg attctggata
     1381 tgcagcttgt ccaggaacgg atcgcgaacg cggccatgga tctttttgct tcgacgtgtg
     1441 tgctgagccg catcgatgga gagattcaat tcgcaggccg aaatggcaat gcagtatcgc
     1501 cggaccactc ggcggcagat ttgtttttgc gtcaatcgtt ccgtcggatt cgcggtttcc
     1561 tggcggggct cacagataat gacgacaagg cagtgatcgc ggcggcaaaa tcttgcctaa
     1621 cgagcgggag cgccaggact gccgcgtaaa cgttttccta actcgcttta gatttcgccg
     1681 agcaattcag gcgaaacctg tcgtgatggg ctgatggcag gaaaatataa tctctcgtcc
     1741 gtgctgccgt gcgggcagca cagtattcgc ccgccataac cgtccgacct tttagtatcc
     1801 gcccggacgg cgaccgtaaa tgtccatgtg ggtgccagta gtcggaattg cagagagacg
     1861 atcgcatcgc tgcggaatgc gcgaaccacc agctaccacg taacaaattt tctttgtttg
     1921 cttggcaggc agtggctgcg atggcagcgc tactacattc ttgcttcgat catcagcgaa
     1981 tgctgatgtg cagaatgcaa gggcgaagat ccctattgca aatcggaccg accagccgca
     2041 cccgcgactc agtctgattc cttttcccat gctgtgattt tgaacccgct gcgaacttaa
     2101 gcaagcttat tccccaatcc acttcgtatt tttaggccag cccactttac catcctcggc
     2161 gaggactgct tcaatccgtc caaagaaaat gttcgaggcg aatgttgttc agacgcgctt
     2221 ttgcttcttc gctacggccg cctccggctg cgacgagctt gtcatagatc gcgacggcgg
     2281 attcccactt cgaatcttcc tccaacaatc gcgctgcgtt gaatccggcc ttgtaatacc
     2341 agaacaactc gcggcgctca ccggggcgcg attcgtcctc cagaatctta tagaacgtcg
     2401 ccagcgcgcc ggctcgatcg cctttttttt ccaggcataa tcctttttta aagagcgcct
     2461 ggctgcgcca atgaatcgac ccctctttat cggcagccaa ttggtcgtag gcctcaatgg
     2521 cacgttgata actactcggg tcggttgcgc cagcttcgaa gaaaatgtcg cccttcccgc
     2581 aaagcgcctc gcgtttttcg gatgcgccgg cgtcactctt caacacttca tcatacaagg
     2641 cgagagcgtc tttaggtttg cctagcttgc gctcgatcac cgcttgttcg ttgcgcgcag
     2701 cccatcgcat cgcgccgttc ttctgcacga cttgatcgaa taaaacgagg gcacgatcca
     2761 gggtatgctc gctcatgctc gacatggctg attctgctgc gaaaaagagc gctttttctg
     2821 tgagtggatc attcggattc tgttgcgcga taatttcaaa ctgcgtctgc gcatttgcga
     2881 agtcctggcg acgatagtac agctcggcca atttcattcg aacttcccga gcgaattgcg
     2941 acgcgccatg ctgctcgaga aatcgctttc caagctcaat gacattcgat tcgtttccgc
     3001 cggctgcttc ttcgacccag atgcgaagat aatcggcgcg ttgagcggca gcagcggtgg
     3061 ggctggattc gacagcgtga tccaggtctt ttcgcgcttc atccaggcgt ggcgacgagg
     3121 aatgaaacgc caactcggcc aaggccaccc aagcctccga cacccgcgga ttctttggaa
     3181 aatcacgaat gaatcgctgc aaagatgtcg cagctttttt gtcgcctttg gcagcctgca
     3241 ttaaaccttc ctccaattgc aaatcggcgc gcgattgttc gtcgccgccc tgtttttcca
     3301 gttggttata atcggcgacg aaacgagtgt gattgccgac ctgcagccag ccgctggatg
     3361 cgttaaacag tgcggctttc gcccaacgcg aatcgcgctg cgcgatttgc tcgaaagaag
     3421 ctattgcggt ctcgaatcgt ctcgccgaat actgcgctcg cgcagatgag aaatcgatcc
     3481 gggtcaacaa ggccgggtcg ggccgcaaca ggcgcgcatc gtccaggatt gctatcgctt
     3541 catcaaagag gccgtcatta atttcaaatt cggcaaactc gacgagagca ggggcgatgg
     3601 tcggcgtttt gatttctgtc tgtcgcagat ctgtgaacaa ttggcgtgcc cgctctctgc
     3661 ggcctgcgcg aatctccagc cgcgcaagat accagcgcgc gaatgttcgc cggggctgtt
     3721 ctggcctgcg gacccacttt tccagttcat tgcgcgacgg tttgtattcg gcgcgataca
     3781 gctcatcgag ctttgcgaat agcagcggaa gatcagggtc tgcgtggtta cgatcgatga
     3841 agcgctcgag tacgtcatct ccggtctcag gcgttttaag ctgcaaatgc gcttcagcga
     3901 tgccgaagag cgcggcgagc agaatgggat ggggcgttcc ctccggcctt ttcaaaatcg
     3961 ccgcaaacat ctcgatcgct cgctccggcc gatgcgaaat cagttcgaga cgcccgcgca
     4021 acacacgccg ctcacgccgt tctgcaacgg aaactggttg cagttgctcc aaaagctggc
     4081 gtgcctcggg agcgtttccc aattcaatgt acagctc
//
LOCUS       DATDAJ010000159         4205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_940722, whole genome shotgun sequence.
ACCESSION   DATDAJ010000159 DATDAJ010000000
VERSION     DATDAJ010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4205
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940722"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1572
                     /locus_tag="VIS53_03790"
     CDS             <1..1572
                     /locus_tag="VIS53_03790"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GreA/GreB family elongation factor"
                     /protein_id="HEY5766938.1"
                     /translation="ESLDGKASTQEIGEWLIGDVFTEPEWKRWWESTRKALKASGGFS
                     IPAKKTDPIEIRGEGVSHADEMLAAFNKARQPKQQIAAFEEIIKSYEQFKEPEKQLQP
                     IVVAIENAAARNQKLHPELAFELIIARDELLARVPSLHTTHIGLTLAKLIVEEEKRLT
                     LILPNLPAAKEKRVLQALPAALGAGWIERALRLMEASHGRMVAQIPRILNETGQHAEL
                     RMMLERSIREHSATSEMLIWLCGEKKNWGDLITPDLLWAILAALEREQHYSTGRASRL
                     LKALVDDRELLGEMFKRVDVGLARDAMRRLQVTPLFDELTKRSLLARMVKVYPELETM
                     IAGAETQEKTAPLIVSWSSLEKRRAEYEEIVKVKIPENTKEIAIARSYGDLSENFEFK
                     AAKQMQSVLMRRKAELEQMLHDARGTSFENPDTSRVSIGTIVTLRNGETNNEETYTIL
                     GAWDGNPDRHIISYQTAIGQVLLGHEVGETVSLNTEDSVAQFTIISIEPAPPDQTTPP
                     PELASESAVAAGVAE"
     gene            complement(1602..2969)
                     /locus_tag="VIS53_03795"
     CDS             complement(1602..2969)
                     /locus_tag="VIS53_03795"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5766939.1"
                     /translation="MKTILRPLLVTITLVLVCVVFFQKAWAVLPPPDGGYPNFNTAEG
                     TNALKNLTSGGANTAAGWYSLFTDTTGSFNTGVGAGTLVLNTGDENTAIGTAALLLNT
                     ASGNTAVGSRALLNNTTGGTLANIQGADVGPNVAIGQQALESNTVASANTAVGYQALH
                     SFTTGPVGLEQLGVSTAVGFQALANATGAGAGNSGFGYQALLNNTDGAGNTAIGLGAL
                     YANTTGGGNVAVGNNALSNNTGDGNIALGFNAGAGVTTANNVISIGTFGTNVSNSCFI
                     GNIYSNVQPVVGTDPDSVTVTSSGRLGRGNVSSRRYKHDIKPIEKASEALYALKPVRF
                     RYNKEYDTTQTLAFGLIAEEVAEVYPDLVGRNPKGEPESVRYDQVNAMLLNEFLKEHK
                     AFIEEQRKVEKQGHKIQEQEATIAQLKNEVKALVAHAKEQDSKIQRVTTTIELVTGAQ
                     LANVP"
     gene            complement(3118..3867)
                     /locus_tag="VIS53_03800"
     CDS             complement(3118..3867)
                     /locus_tag="VIS53_03800"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: protein motif:HMM:NF008692.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEY5766940.1"
                     /translation="MHRFYVMPENWDPRKLALRGSEAHHARNVLRMQAGDKLVLFNGE
                     GHELTAEITSVADHEMRLRKLHEAETQPLRCRIVLGQAIPKGKNMDLIVQKAVEIGAA
                     EIAPIISDRTIVQLDSESASQKQTKWQQIAIEAAKQCGQNWLPRVHAPKKLAEFFSTS
                     EQPFDLRLIGSLQPDAQQLKKILETYSSEHGDRPRNVLMLVGPEGDFTPAELALARRH
                     GCQPITLGPIILRVETAAIYCLSVLSYELLI"
     gene            complement(3889..>4205)
                     /locus_tag="VIS53_03805"
     CDS             complement(3889..>4205)
                     /locus_tag="VIS53_03805"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766941.1"
                     /translation="PDLLRSVFESVTSKYTDRDIGVHLHSAPAQAESKVLAAYDAGCR
                     RFDSAIGGLGGCPFAQNALIGNIPTERLLAALKQRGVELPVSNAFQNVVSLNSLIAAD
                     YS"
BASE COUNT          950 a         1117 c         1204 g          934 t
ORIGIN      
        1 gaaagcttgg acggcaaggc cagcacacag gagatcggag aatggctcat tggcgatgtc
       61 ttcaccgaac cggagtggaa acgctggtgg gaatcaacca ggaaagcgct taaagcaagc
      121 ggcgggttct ccattcctgc aaaaaagacg gaccccatcg aaatccgtgg cgaaggagtg
      181 tcgcacgccg acgagatgct ggcggcattc aacaaggcca ggcagccgaa gcaacaaatt
      241 gcggcattcg aggagatcat aaaatcttac gagcaattca aggaacctga aaaacaactt
      301 cagccgatcg tcgtcgcgat cgagaatgca gcggcacgca atcagaaact gcatcctgag
      361 ctggcattcg aactcatcat tgcgcgagat gaattgctcg cgcgcgttcc gtcactgcac
      421 accacacaca taggtctgac tcttgccaaa ttaattgtgg aagaggaaaa gcgtctgaca
      481 ttgatcttgc caaacttgcc agcagcaaaa gagaaacgcg ttttgcaagc gctgccggcc
      541 gcgcttggag caggctggat agagcgggcc ttgcgtctca tggaagcgag ccacggtcga
      601 atggtcgcgc aaattccgcg catcttgaac gaaaccggac aacacgccga gcttcggatg
      661 atgctggagc gaagcattcg cgaacattca gccacgagcg agatgctcat ttggttgtgc
      721 ggcgaaaaaa agaattgggg cgatctgatt accccggatt tgctgtgggc gatcctcgcc
      781 gcgctcgagc gcgaacagca ttattctacc ggtcgcgcca gcagattgct gaaagcattg
      841 gttgatgatc gggaattgct tggggagatg ttcaaaaggg tcgatgtcgg cctggcgcgc
      901 gatgcgatgc ggcgcctcca ggtcacgccg ctattcgatg agttaaccaa acgatcgctc
      961 ctggcacgga tggtcaaagt ttatccggaa ttggaaacca tgatcgccgg cgcagaaacg
     1021 caggaaaaaa ctgcgccgct cattgtgtcc tggagcagtt tggaaaaacg cagggcggaa
     1081 tacgaagaga tcgtgaaagt aaaaattccc gagaacacga aggagatcgc aattgcccgg
     1141 tcttacggag atttgagcga gaactttgaa tttaaagcag cgaagcaaat gcaaagcgtg
     1201 ctgatgcgac gcaaagccga gctggagcag atgctgcacg acgcgagggg cacgtcattt
     1261 gaaaatccgg acacgtcgcg cgtgtccatc ggcacgatcg tcacgttgcg caatggagaa
     1321 acaaacaacg aagagacata cacgatcctg ggcgcatggg acggcaatcc cgatcgccac
     1381 attatctcgt accaaacggc catcggccaa gtcctgctcg gtcatgaggt tggcgaaact
     1441 gtttctctaa atactgagga cagcgtcgcg cagtttacta tcatttcgat cgagcccgcg
     1501 ccgccagacc aaacgacgcc cccgcccgag cttgcgagcg aatccgccgt ggcagcggga
     1561 gtggccgagt aggctccgcg gggagcgcac gcaccttcac gtcacggaac attagcgagc
     1621 tgcgcacctg tgaccaactc gatcgtggta gttacccttt gaatttttga atcctgctct
     1681 ttcgcgtgcg caacgagcgc tttcacttcg ttttttaact gcgcgatcgt ggcttcttgt
     1741 tcctgaatct tgtgcccttg tttctccacc tttcgctgct cttcgatgaa cgccttgtgc
     1801 tctttaagaa actcgttaag caacatcgcg ttcacctggt cgtagcggac cgattcgggc
     1861 tcgcccttgg gattgcgtcc caccagatcg ggatacactt ccgccacttc ctcggcgatc
     1921 agcccaaagg caagcgtctg cgttgtatcg tattccttgt tataacggaa tctgacgggc
     1981 ttgagcgcgt agagtgcttc gctggccttc tctatcggct tgatgtcgtg tttgtaccgg
     2041 cgcgaggata cgttaccgcg gccaagtctg ccgctgctgg tcacggtgac tgaatccgga
     2101 tcagttccaa caacgggctg cacgttggag tagatgttgc cgataaagca gctgttgctc
     2161 acgttcgtgc cgaacgtgcc gatagagata acgttattgg ctgtagtaac gccagccccc
     2221 gcattgaaac ctaaggcaat attaccgtcg ccggtgttgt tagagagcgc attattgccg
     2281 acagccacgt tgccgccgcc agtcgtgttt gcatatagcg cgccgaggcc aatggccgtg
     2341 ttaccagcac catcggtatt gttaagcagt gcttggtagc caaatccgct attgcccgcg
     2401 cctgcacccg tggcattggc gagagcttgg aaaccgacag ccgtggaaac gccgagctgc
     2461 tccaacccga cgggcccggt tgtgaaacta tgaagtgcct ggtaacccac agccgtgttg
     2521 gcactggcaa cagtgttact ttcaagagcc tgctgcccaa tagccacgtt gggacctaca
     2581 tccgctcctt ggatgtttgc cagcgtgccg ccagtggtat tgttgagaag tgcccttgag
     2641 ccaacggctg tattgccgct ggcggtgttg agtaaaaggg cggcagtgcc gatggccgta
     2701 ttttcgtctc ccgtgttcag taccagcgtt cccgcgccga caccggtgtt gaagctgccg
     2761 gtagtgtctg taaacagcga ataccaacca gcagctgtgt tagcgccgcc gctggtgaga
     2821 tttttaagcg cgttggttcc ttccgccgtg ttgaagttgg gataaccgcc atccggcggc
     2881 gggagaactg cccatgcttt ttggaaaaag acaacacaga cgagcacgag agtgattgtg
     2941 acaaggagtg gtcgaaggat tgttttcatg cgacagagct tcccagaaat cgaggtagcc
     3001 tgtcgaggta aatgcgggat ccattccccg cgcacgggcg aattaccgaa agggtgtccc
     3061 ttttccaagc atcatgggat ccctcgactt cgctcggaac ggtggaccgc gccaaattta
     3121 gatgagcaat tcgtaagaga gaacactcag gcagtagatt gccgcggttt ctactcgcag
     3181 gataattggg ccgagtgtga tcggttggca accgtgccga cgcgcgagcg caagctccgc
     3241 aggagtgaag tcgccctcag gcccaaccag catcaatacg tttcgaggac gatcaccgtg
     3301 ctcgctcgaa taggtttcca gaattttttt taattgctgc gcatcgggct ggagcgatcc
     3361 gatcaggcga aggtcgaatg gctgttccga tgttgaaaag aattcggcta attttttcgg
     3421 agcgtgaacg cgcggcagcc aattctggcc gcattgcttg gccgcttcga tggcgatttg
     3481 ctgccatttt gtctgttttt gcgaagcgct ttctgaatcg agctgcacga tcgtgcgatc
     3541 ggaaatgatc ggtgcaattt cggctgcacc aatctcgaca gccttctgca caatgaggtc
     3601 catgtttttt ccttttggaa ttgcctgtcc caggacgatc cggcaccgca gcggctgcgt
     3661 ttccgcttcg tgcaattttc gcaaccgcat ctcgtggtcg gcgacactgg taatttctgc
     3721 cgtgagttcg tggccttctc cgttgaagag gacgagcttg tctccggctt gcatgcgcaa
     3781 gacgttgcgc gcgtgatggg cttcggagcc gcgtaacgcg agtttccgag ggtcccagtt
     3841 ctctggcatg acgtagaagc gatgcatggg acggctgtat tgattcgcct acgaatagtc
     3901 agccgcgata agcgagttta gcgacacaac attttggaac gcattgctga ccggcaactc
     3961 tacgccgcgc tgttttaaag cggcgagtag gcgttctgta ggaatgtttc caatcagtgc
     4021 attctgcgcg aatgggcagc cacccaatcc gccaatggcg gaatcaaaac ggcggcagcc
     4081 ggcgtcatac gcggcgagta ctttcgattc agcctgtgcg ggcgcgctat ggaggtgcac
     4141 tccgatgtcg cggtcggtgt atttacttgt cactgattca aacacacttc gaagcaaatc
     4201 aggac
//
LOCUS       DATDAJ010000160         5358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_946807, whole genome shotgun sequence.
ACCESSION   DATDAJ010000160 DATDAJ010000000
VERSION     DATDAJ010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5358
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946807"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(346..419)
                     /locus_tag="VIS53_03810"
     tRNA            complement(346..419)
                     /locus_tag="VIS53_03810"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(383..385),aa:Arg,seq:acg)
     gene            656..2383
                     /locus_tag="VIS53_03815"
     CDS             656..2383
                     /locus_tag="VIS53_03815"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY5766942.1"
                     /translation="MNKQDSDRTDLDDSITRRKFIGTAALGSAALLGGGLTSLVSRSA
                     SAAAGFQFVEATIPELQNAMASGQLTSAHLVRGYLERIQSLNPLLHSVIQTNPVAVCI
                     AQELDEERRNGHLRGPLHGIPVLVKDNIATEAEACNGNEQMMQTTAGSLALVGSVVPG
                     DAVIIRRLRNAGAVILGKANLGEWANFRGFDNVYPLAVGWSARGGDTINPYNLSYTSW
                     GSSSGSANGVAANLCSVAVGTETDGSITGPSAVECIVGLKPTLGLVSQQGIIPISHQQ
                     DTAGPMGRSVTDVAILLNALQSPFGRVIGQPLPDDYTRFLRRGALQGARIGRDVRYFD
                     YSYYGSGIPGDFSTVGFAEHALEVMKDLGATIVDCDTGDVFEYTDDEFTALLYEFKVQ
                     IAQYLATLTNTNMRTLADLIRFNQVHCKRELVYYGQEIFELAEQTIGYPTNPMYVHAR
                     NRAQYLARRGIDNALATRNLDAIVAPHLTNSTGPAVAGYPNLSLPVGIRPPSGRPAGM
                     LMYSTFLREPKLIGLAYDLEQRMKVRRQPQFLDSVTPVPNAHLCDHRAEPGRVFPGTA
                     KMPPHNRIF"
     gene            2438..3580
                     /locus_tag="VIS53_03820"
     CDS             2438..3580
                     /locus_tag="VIS53_03820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766943.1"
                     /translation="MTIFLGCGFAAKYREGGGNFSVPLQWMLGLRRLKLDAIWLELLP
                     GMDNVLADRSKIRNFQRQLRAHGLAGRYCLLYQKPAADTHDLDSLQCIGISKRELLER
                     LSGPNALLNLAYSIHPPLLLKFERRIFCDLDPSEIFYWMTKMEVGQSYHHEFWTIGLN
                     VHGQDCGLPKSALAWKTFYPLVDTKLFRPQSRPRSPKFTTVGQWYWGGAVEVAGEFPD
                     LSKRFAFEPYLSVPTRVPEARFELAMNIAADDPERKRLRRLGWQIADPHRVARTPGTY
                     RRYLATALAEFTAIKGVDVAWRTGWVSDRAAAFLALGRSVITEDTGAQRYLPAENGFC
                     FIRSVAEAEAAVREVLHDWSRLSKQARQCAVEVFDSVRNLRRILAF"
     gene            3634..3918
                     /locus_tag="VIS53_03825"
     CDS             3634..3918
                     /locus_tag="VIS53_03825"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006984006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY5766944.1"
                     /translation="MADLIKQSELKDRMKKIPEWELEKNQIERTFEFDDFVDAIDFVD
                     RVAEVAEEEEHHPDIDIRYNKVCLMLSTHSKGGLTELDFNLAERIDTLEE"
     gene            complement(3969..4400)
                     /locus_tag="VIS53_03830"
     CDS             complement(3969..4400)
                     /locus_tag="VIS53_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5069 domain-containing protein"
                     /protein_id="HEY5766945.1"
                     /translation="MAQVPLRSPSEKVGGIFYFARMLDKIRLHTKGELPSDYHDNLGK
                     GFDEKCVKFLRVDYDELVERVKKGGTDEEILDWCFTVGREPSEDDIYVWNEFMRKRGW
                     NDEVSEMVECRKAEAGMTDRSDIQTSFQFIDADEGRLPKSE"
     gene            4560..5021
                     /locus_tag="VIS53_03835"
     CDS             4560..5021
                     /locus_tag="VIS53_03835"
                     /inference="COORDINATES: protein motif:HMM:NF039588.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY5766946.1"
                     /translation="MKERYFDDLKTGDRFKSDPLSVTEKKLIEFAHKFDPQMFHLSRN
                     RAERTIFKGLIASGWHTAAMTMRLFVKTLNFAEGAIGLGVDELRWPNAVRPGDVLTVE
                     TEILELRPSRSRPGHGIIRLRNVTTNQRGEVVQTMLASAMVPRGEHERAKR"
BASE COUNT         1225 a         1446 c         1504 g         1183 t
ORIGIN      
        1 aataatcgaa tccacgccga aaccaacgag cgcgatgctg ccagctatga cacccgcacc
       61 gataccaaca actgcttcgg tgagattcca gccaagcgtg aaatactcaa ggcgacgacc
      121 tttgcgcgtg tcgctttcgc gcagatcaac gtgtgcagga atcgtcgatg acatactttg
      181 acatcgccga tgtgcccttg ggtttcaatc acgttgccca cgcggcagac aaaaacatct
      241 gtgcgtggtt caaatgtgca ggcatgggac tcgtagtttc acacgggcat gggagtctgg
      301 cgccaagata gggcaatata agggcaatga aagcggagaa gagcgcgcgc ccgagaggat
      361 tcgaaccact aaccttctga tccgtagtca gatgctctat ccagttgagc tacgggcgcc
      421 cgtgaagagc ggtaatttgc gggggaacgg cggggcggtc aaataaagcg gacagaattt
      481 cgaaccgatt taagtattgg aatcgattag tttaagtagg gctatggagt ttgcatcgcg
      541 aacagcacct gggctcgaat ccgaaccaag cggaacggac gtttttcagt cacatcaaac
      601 aaatcataac ctcacgtctg ttcactcgcg aaacagcgtt taaccgaaga ataccatgaa
      661 caagcaagac tctgatcgta ccgacttgga cgacagcatc acacgccgca aatttatcgg
      721 gacggccgct ctcggcagcg cggcgctgtt aggcggtgga ttaacttcgc tcgtttcgcg
      781 gtctgcttca gctgcggcgg gattccaatt tgttgaggcg acaatccccg agcttcagaa
      841 cgcaatggct tcgggtcagt tgaccagtgc gcacttggtg aggggctacc tggaacgtat
      901 ccagtcgctc aatccgttgc tgcattcggt aatccaaaca aatccagtcg ccgtatgcat
      961 cgcgcaggaa ctcgatgagg agcggcgtaa cggacacctt cgtggtccgc tccacggaat
     1021 tcctgtcttg gtcaaggaca acatcgcgac ggaagctgaa gcctgtaacg ggaatgagca
     1081 gatgatgcaa acaactgccg ggtcgctggc gctggtcggt agcgttgtgc cgggcgatgc
     1141 agtcatcatt cgccggctgc gcaatgccgg cgcagtgatc cttggcaaag caaacttggg
     1201 agaatgggca aactttcgcg ggtttgacaa cgtttatcct ctcgcggtcg gctggagtgc
     1261 gcggggcgga gacacaatca acccatataa cttgagctac acgtcatggg gttccagttc
     1321 cggttccgca aatggcgtcg ccgcgaattt gtgctcggtc gcagtcggca ctgagacaga
     1381 tggatcaatc actggaccat ccgccgtcga gtgtatcgtt ggtttgaaac cgactcttgg
     1441 tcttgtttcg caacaaggga taattccaat ctctcatcaa caggacacgg ctgggccaat
     1501 gggccgcagc gtcaccgatg ttgcgattct tctcaatgca ttgcagtcgc ccttcggtcg
     1561 cgtaattggt cagcccttac ccgatgacta tacgcggttc ctgcgacgcg gcgcactgca
     1621 aggcgcacgg atcggacgcg acgttcgcta ttttgattac agttactacg gcagcggtat
     1681 tcccggcgat ttctctacgg tagggtttgc agagcacgca ttggaagtaa tgaaagactt
     1741 gggtgcaacc atcgtcgact gcgataccgg tgacgtattc gaatataccg acgacgagtt
     1801 caccgcgttg ctctacgaat ttaaagtgca aatcgcgcag tacctcgcaa cgctcacgaa
     1861 caccaacatg cgaacgttgg ctgacctgat taggttcaac caagtacatt gcaagcgaga
     1921 actggtttac tacggtcagg agatctttga actcgcggaa cagacgatcg gttatcccac
     1981 caatcccatg tatgttcacg cgcgaaatcg cgcccagtat ttagctcgcc gtggcatcga
     2041 caatgcactc gccacgcgca atctggatgc aatcgtcgca ccgcacctca cgaattcgac
     2101 cggaccagcc gtggcgggtt atccgaactt gtcgcttccc gtggggatcc gtcctcctag
     2161 cggcaggccc gcgggaatgc tgatgtacag caccttcctg cgcgaaccaa aattgattgg
     2221 cctcgcttat gatctggagc agcggatgaa ggtacggaga cagccgcagt tcctcgattc
     2281 agtgaccccg gtgccgaacg cccatctctg cgatcaccgc gcggagccgg ggcgtgtgtt
     2341 cccgggaaca gcgaagatgc cgccgcacaa tcgcatcttc taaaactaga gaatctttga
     2401 agcttgagca cgcgagcaga aagaccattc tgctcgcgtg acgatctttt tgggttgcgg
     2461 ctttgctgcg aagtatcggg aaggcggcgg caatttttcg gttccgctgc aatggatgct
     2521 cgggctccgg cgactcaagc tcgatgctat ctggctggag cttttgccag gcatggacaa
     2581 tgtcctcgcg gaccgatcaa agatcaggaa tttccagagg caactgcggg cacacggatt
     2641 ggcggggcga tattgtttgc tttaccagaa gccggcagcg gatacgcacg atctggactc
     2701 gctgcagtgc atcggaatat ccaaacgcga gctactcgag cgccttagcg gacccaatgc
     2761 cctgctcaat ctagcatatt cgattcatcc gccgctgctc ctgaaatttg agcgacgcat
     2821 tttctgcgat ctcgacccga gcgaaatttt ttattggatg acgaaaatgg aagtggggca
     2881 gtcgtaccat cacgagtttt ggacgatcgg cctcaatgtg catggacaag attgcgggct
     2941 gccgaaatcg gcgctcgctt ggaaaacatt ttatccgctc gtggacacga aactgttccg
     3001 gccacaatcg cggccgcgct caccgaaatt cacaacagtc gggcaatggt attggggtgg
     3061 ggcggtggag gtcgccggcg aatttccgga tctgtccaaa cgatttgcct tcgaacctta
     3121 tctaagtgtt ccaacgcgcg tgcccgaggc gcggtttgag ctggcgatga acatcgctgc
     3181 ggacgatccc gaacgaaaac gattgcgccg gctcggctgg caaatcgccg atccgcaccg
     3241 cgtcgcccgc acgcctggga cgtaccgccg ctatctcgcc accgcgcttg cggagttcac
     3301 cgcgattaag ggcgtcgacg tggcctggcg tacgggctgg gtcagcgatc gcgctgcggc
     3361 ttttttggcg ttgggtcgct cggtgattac agaagacacc ggtgcacaac gttatctccc
     3421 ggccgaaaac ggattctgtt ttatccggtc cgtcgccgag gcggaggccg cggttcgcga
     3481 ggtgctgcac gattggtcgc ggctgtcgaa gcaagcgcga cagtgcgcag tggaagtctt
     3541 cgactcggtc cgaaaccttc gccgaatact tgctttttag gcgctcgatt tgccgttgca
     3601 aaacgatttt cgggtgatac tcgttgtccc gttatggctg acttgatcaa acaaagcgaa
     3661 ctgaaggatc gcatgaaaaa gatcccggaa tgggaattgg agaaaaacca aatcgagcgc
     3721 actttcgaat tcgatgattt tgtcgatgcg atcgattttg tcgacagggt cgctgaggtg
     3781 gctgaggaag aagaacatca ccccgacata gatatccgct acaacaaggt ttgtctgatg
     3841 ctttcgacgc acagcaaagg cggtttgacg gagcttgatt ttaatctggc cgaacgaatc
     3901 gataccttgg aggaatagaa agggtggcgg cggcacgctg cgtcgcccga ctgcgcggcg
     3961 tgccgactct actcggattt cggcagacgc ccttcatcgg catcgatgaa ttggaatgag
     4021 gtctgaatat cggaacggtc cgtcattcct gcctcggctt tccggcattc caccatttcc
     4081 gaaacttcgt cgttccagcc gcgcttccgc atgaattcgt tccaaacata gatgtcgtcc
     4141 tcagatggtt cgcggccgac tgtgaagcac caatccaaaa tttcctcatc ggtgccgccc
     4201 tttttgacgc gctcgaccag ctcatcgtag tcgacgcgga gaaacttcac gcatttttca
     4261 tcaaaacctt ttcccagatt gtcgtgataa tctgacggca attcgccttt ggtgtgcagc
     4321 cggattttgt cgagcatccg agcgaaataa aaaatgccgc ctactttctc tgagggactg
     4381 cgcagaggaa cctgggccat gaaatgaagt ttgagccttc tctcgcacca ttcaagcgcg
     4441 cgaaacaaaa ctcatttcgt acgatcgccc gagcatgagc aggtacgtgt cgacgccttc
     4501 acttatttat tgctcgactg tgaccgatca cgcaacaatg tgcttcggcc attcttatca
     4561 tgaaggagcg atatttcgac gatctgaaaa caggtgatcg gttcaaatct gacccgttga
     4621 gcgtgaccga gaagaagctc atcgaattcg cccacaagtt tgatccgcaa atgtttcacc
     4681 tcagccgcaa ccgtgccgag cgaacgattt ttaagggatt gattgccagc ggttggcaca
     4741 ccgcggcgat gaccatgcgc ctgttcgtga aaacgctgaa cttcgccgag ggcgcaatcg
     4801 gtcttggcgt ggatgaactg cgctggccga atgcggtgcg gcctggcgac gtgctcacgg
     4861 tggagaccga gattcttgaa ttgcgcccct cacgatcccg gcctggccac gggatcatcc
     4921 ggttgcgcaa cgtgacgacc aatcagcgtg gcgaagtcgt gcaaaccatg ctggcgagcg
     4981 cgatggtgcc gaggggggag cacgaaagag caaagagata agcggcaagc gtaaagcccg
     5041 aacatatgat tgcactcctc gcttccggaa ggcaacacga gcagacgatt atgagtgatt
     5101 atagcaaaca tgagacggaa gagagccgca aaatcaccag cttctctcgc aagctgtgac
     5161 ggctaggtgg gcgctttgcc cttacctctt tgcgcttgtc gcggccgctt ctttgaaatc
     5221 gtcaggcaat ggagcttcaa agtgcttcca ttcgccagtg cgcgggtgac gaaaaccgag
     5281 cttccatgcg tgcagcatct ggcgcggaaa atctttagcg aatctcggcg cgtagatttt
     5341 gtcacccaat acaggatt
//
LOCUS       DATDAJ010000161         4677 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_950142, whole genome shotgun sequence.
ACCESSION   DATDAJ010000161 DATDAJ010000000
VERSION     DATDAJ010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4677
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_950142"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..517)
                     /locus_tag="VIS53_03840"
     CDS             complement(<1..517)
                     /locus_tag="VIS53_03840"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY5766947.1"
                     /translation="MIQFLFKLILCLLLAIAAAFAYVAVKSGDPLYALYEWMSPARFH
                     QYDRLIGSVALEHHLDPMLVKAVVWRESRFDPKKRGSHGERGLMQVSEVAANEWAREN
                     KIAGFNVDQLFEPKTNLEAGTWYLHRAMEHWNHQSDPTPFALAEYNAGASRAQRWSGG
                     KGVAEIPEQQFL"
     gene            568..2844
                     /gene="priA"
                     /locus_tag="VIS53_03845"
     CDS             568..2844
                     /gene="priA"
                     /locus_tag="VIS53_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEY5766948.1"
                     /translation="MNHEHGTRYVRVIVDRAIHRELDYSLPENLAVRAGVGSRVRVPF
                     RDKSALATVVAILEQSEAKGIRPIEAIIGDGPILSQPLLELARWIGTYYCCPIETVMR
                     SMLPQVIRRAEVGWKKQLFVQPARGLDEADFEKLRRRAPRQAELLAAISKLEKPIRAA
                     ELLRQTSLDNQTLRALAKRGLAEIREEAVVRDPHGDEQFIATSNLVLNEEQTHALNDV
                     EQALDASENARPILLHGVTGSGKTEIYLQAIRAALDRGGTAIVLVPEISLTPQTVERF
                     KGRFAEAQDAVAVLHSHLSEGERHDEWHKIHSGRARIVIGARSAVFAPLKNLGLIVVD
                     EEHETTYKQEEAPRYHARDVAVVRAKIEKCVVVLGSATPSLESYHNATIGKYRLVTLT
                     QRVDQKQMPLMRIVDLRQERRKGKKAAILSERLSQAIAGRLEKREQTILFLNRRGFST
                     SLLCSNCGEARNCPNCSVALTFHQHFSKGGSASPKTMAGRLSCHLCGHTAAVPKKCPA
                     CGQDALIYHGFGTEKVESTVAQIFPTAVVRRMDADSMTRKEAYRETLRNFRTGKIDIL
                     VGTQMIAKGLHFPNVTLVGIINADLALHLPDFRAGERTFQLLTQVAGRAGRGETVGEV
                     FVQTYTPFSPSIQFARHHDFAGYFQQELEFRERCDFPPFKHAVLITVRSAHEGRAKLS
                     AETLKRRLSEALPEEFILGDATPAPLEKLQGQFRFHILIRGEAIVRLSRLVRETLEKL
                     PLPEDVTMTVDVDPYQLL"
     gene            complement(2879..3796)
                     /locus_tag="VIS53_03850"
     CDS             complement(2879..3796)
                     /locus_tag="VIS53_03850"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY5766949.1"
                     /translation="MQNEITLKRCEDASHAYSASHKSEPRSFYFAKFWKCARVLAPLL
                     LLVSSAVFGAEDKPLWKIQKVLASKKYVDLTHEFAPGIPRWPGFPDETRKTIYWYDKR
                     PDTMGSGFFSELFTHVGQWGTHVDPPAHFVKGLRTVDQIDPKEMLLPLVVIDVHEEAA
                     KNADYTLSLDRVKKWEKDHGQIPAGAFVAMRTDWSKRWPDAAKMENKDATGVAHYPGW
                     SLPALKYLYEGRKITASGHETTDTDPGLAASKDDYSLETYILSTNHYQIELLTNLDQV
                     PEAGALVVVSFPKPKGGSGFPARAFAIVP"
     gene            4052..>4677
                     /locus_tag="VIS53_03855"
     CDS             4052..>4677
                     /locus_tag="VIS53_03855"
                     /inference="COORDINATES: protein motif:HMM:NF021365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY5766950.1"
                     /translation="MNPFRILYPNRPDRGVRSLCALAVMTKAPQAGRVKTRLVPPLTP
                     EEAAELNKCFLRDTAAAISSVCSSRPVGDASKMQFEHAGASHSEAATGAAGIAVYTPI
                     GAEAVYTDILPADFSLLPQRGEKFGERLYFAVEDLIKCGFESVCLIDSDSPTVPGKNL
                     QQAVELLSMGEDRVVLGPTEDGGYYLIGVKKPHHHLFDRIDWSTERVL"
BASE COUNT         1079 a         1308 c         1274 g         1016 t
ORIGIN      
        1 gcagaaactg ctgttccggt atctcagcaa ccccctttcc accgctccaa cgctgggcac
       61 ggctggcgcc ggcgttgtac tccgccaaag cgaaaggagt tggatcggac tggtggttcc
      121 agtgttccat ggcgcgatgc aaataccagg tgcccgcttc cagatttgtc tttggttcga
      181 aaagttgatc cacattgaaa ccggcgatct tgttttcgcg cgcccactcg ttggccgcta
      241 cttcgctcac ttgcattagg ccgcgctctc catggctgcc acgctttttt ggatcgaatc
      301 ggctctcacg ccagacgacg gctttcacca gcatcggatc caaatgatgt tccaacgcaa
      361 cgctgccgat aagccgatcg tactgatgaa accgggctgg gctcatccat tcgtataatg
      421 cgtacagcgg atcccccgat ttcactgcga cataagcaaa ggccgcagcg attgccagca
      481 ataggcagag aatcaatttg aaaaggaact gtatcattta agtcatgcta caatagccga
      541 ttacaaatta agggcacgag cacgagcatg aatcatgagc atgggacgcg ctacgtccgc
      601 gtcattgttg atcgggcaat tcatcgcgag ctcgattatt cgttgccgga aaatttagcc
      661 gtgcgcgccg gggtcggctc gcgcgtgcgg gtaccgttta gggataaatc ggcgctcgca
      721 acagtcgttg cgatccttga gcagagcgaa gccaaaggca tccggcccat tgaagcgatt
      781 atcggcgatg ggccgatctt gagccagccg ttgctcgaac tggcgcgctg gatcggcacc
      841 tactattgct gtccgatcga aacggtgatg cgcagtatgc tgccgcaagt gatccggcgc
      901 gctgaagtcg gctggaaaaa acagctattc gtgcaacccg cgcgtggcct cgacgaagcc
      961 gacttcgaga aattgcgacg acgcgcgccg cgacaggcgg aactactggc ggcgatttcg
     1021 aaactcgaaa aaccgatccg cgcggcggag ctcctacggc aaacctcgct cgataaccag
     1081 acgttgcgcg cgctcgcaaa gcgcggtctg gctgagatac gcgaagaagc agtggtgcgc
     1141 gatccgcatg gcgacgaaca gttcatcgca acgtcgaatc tcgttctgaa cgaggagcaa
     1201 acgcacgcat tgaacgacgt cgagcaagca ctcgacgcat ctgagaacgc gcgtccgatt
     1261 ttgctccacg gcgtcacggg ttcaggcaaa acggaaattt atctgcaggc catccgcgcg
     1321 gcgctcgaca gaggaggcac agcaattgtt ctcgtacctg aaatttcgct tacgccgcaa
     1381 acggtggaac gtttcaaagg ccggttcgcc gaagcgcagg atgccgtcgc tgttttgcac
     1441 agtcatttgt ccgagggcga acgacacgac gaatggcaca aaattcattc cggccgcgcc
     1501 cggattgtga tcggcgcgcg tagcgctgtg ttcgcgcctc tgaagaatct cggactcata
     1561 gttgtcgatg aagaacacga aacgacctac aaacaggaag aagcgccgcg atatcacgcc
     1621 cgcgatgtcg cagtcgtccg cgcgaagatc gaaaaatgcg tggtcgtttt aggcagcgcc
     1681 acgccgtcgc ttgagagtta tcacaacgcg acgatcggaa agtaccggct cgttacgctc
     1741 acgcagcgcg tggaccaaaa gcagatgccg ctcatgcgca ttgtcgatct gcgccaggaa
     1801 cgacggaagg gaaagaaagc cgctattctg tccgagcgat tgtcgcaagc cattgccggt
     1861 cgtctcgaga aacgagagca gacgatcttg tttttgaacc ggcgcggatt ttccacgtcg
     1921 ctgctgtgca gcaattgcgg tgaagcgcgc aattgtccga attgcagtgt cgcgctcacg
     1981 tttcatcagc acttttccaa aggtggatcg gcttctccga agacgatggc cggccgatta
     2041 agctgccatt tgtgcggaca taccgccgcc gttccaaaga aatgtccggc ctgcggacaa
     2101 gacgcgttga tttatcacgg cttcggtact gagaaagtgg aatcaacggt cgcgcagatt
     2161 ttccccacag cggttgtgcg ccgcatggac gccgattcga tgacgcgtaa agaagcgtat
     2221 cgcgaaacgt tgcggaattt tcgcaccggc aagatcgata ttctcgtcgg cacacaaatg
     2281 atcgcgaaag gtctgcattt tccgaacgta acgcttgtcg gaatcatcaa tgccgatctc
     2341 gccctgcatc ttcccgattt ccgcgccggc gaacgcactt tccaacttct cacacaggtg
     2401 gccggacgcg ccggccgcgg tgaaacagtc ggcgaagttt tcgtgcaaac ctacacgcca
     2461 ttcagtccat caattcaatt tgcgcgtcac catgatttcg ccggctattt ccagcaggag
     2521 ctcgagttcc gcgagcgttg cgatttcccg ccattcaaac acgcggtcct gatcaccgtg
     2581 cgttctgctc acgaaggccg cgccaaactt tcagccgaaa ccttgaagcg tcgtttaagc
     2641 gaagcgttgc ccgaagaatt cattttgggc gatgcaacgc ccgcaccgct ggaaaaacta
     2701 caaggccaat tccgtttcca cattttgatc cgtggcgaag ccatcgtgcg cctaagccgc
     2761 ctcgtccgcg aaactctcga gaaactgccc ttgcctgaag acgttaccat gacagtcgat
     2821 gtcgacccct atcagttgct ataactccgg tgaggcaaac gcggccaatt cgcacgattt
     2881 aaggcacaat cgcgaacgca cgcgcgggaa aaccagagcc gcctttcggt ttgggaaaac
     2941 tgactacgac cagcgcgccg gcctcgggaa cttgatcaag attcgtgagc aactcgattt
     3001 gataatgatt cgtgctcagg atgtaagtct ccagcgagta atcgtcttta ctcgcggcaa
     3061 gccccggatc ggtatcggtg gtttcgtggc ctgacgcagt gatcttgcga ccctcgtaaa
     3121 gatatttcag cgcggggagg ctccagccgg gataatgggc gacgccggtt gcatctttgt
     3181 tttccatttt tgccgcgtca ggccaccgct tcgaccaatc cgtgcgcatc gcgacgaaag
     3241 caccggcggg aatttgacca tgatctttct cccacttttt cacgcggtcc agtgagagtg
     3301 tgtagtcagc atttttcgcc gcttcctcat gcacgtcgat gacgaccagc ggcaggagca
     3361 tttctttcgg atcaatctgg tcgacagtgc gcaggccttt aacgaaatgc gccggcggat
     3421 ctacgtgcgt gccccattga ccgacgtgcg tgaagagttc tgagaaaaac ccggagccca
     3481 tcgtgtcggg acgcttgtca taccaataaa ttgttttgcg cgtttcatcc ggaaaaccgg
     3541 gccagcgcgg aattcccggc gcaaactcgt gcgtaaggtc gacatatttc ttcgacgcga
     3601 gcaccttctg gattttccaa agtggtttat cctcggcacc gaacactgct gaactcacca
     3661 agagcaaaag cggcgcgagg acgcgcgcgc acttccaaaa cttcgcgaaa taaaatgagc
     3721 gcggttcact tttgtgcgaa gcgctgtagg cgtgcgacgc gtcctcgcat cgctttaacg
     3781 tgatctcgtt ctgcattccc gactttgtta aagcatttcg gagcaattcg ctaataagtt
     3841 tgaataacct tgaacaactg ctggtttgtt ttcgacaacg aaggtttgtc gttgcagcgc
     3901 acagatatta tcaacagctc atttgcaccc agatttgcga gggcacgcgc cgagacagat
     3961 ccttgttatt cacgccgcta agaagaagaa attctctaga aggaaaattc aaatcatctt
     4021 cttgagatgt gaaaaactct ctcactaaca gatgaacccg tttcgcattc tctatccaaa
     4081 tcgtcccgat cgcggcgtgc ggagtctttg cgcattggcc gtcatgacca aagcgccaca
     4141 agccggacga gtgaaaacgc gattggttcc accattaacg ccggaggaag cagcggaact
     4201 gaataaatgt tttctgcgcg acaccgcggc tgcgatttcg agcgtctgta gcagtcgccc
     4261 tgtgggcgac gcaagcaaga tgcaattcga acacgccggc gcttcgcaca gcgaagcggc
     4321 tacaggcgcg gccggaatcg cggtgtacac acccatcggc gcagaggccg tctacaccga
     4381 tattctcccg gccgatttca gcttgttgcc gcaacgcggc gagaaattcg gtgagcgtct
     4441 ctatttcgcg gtcgaggatt taatcaagtg cggttttgaa tcggtatgtc tgatcgattc
     4501 ggacagccca actgtgcccg ggaaaaattt acaacaagcc gttgaacttc taagcatggg
     4561 cgaggatcgc gttgtgctcg ggccgaccga ggacggggga tattacttga ttggagtgaa
     4621 gaaaccgcat catcacttgt tcgaccgaat tgattggagc accgaacgcg tgctgaa
//
LOCUS       DATDAJ010000162         4166 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_952041, whole genome shotgun sequence.
ACCESSION   DATDAJ010000162 DATDAJ010000000
VERSION     DATDAJ010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_952041"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(90..1040)
                     /locus_tag="VIS53_03860"
     CDS             complement(90..1040)
                     /locus_tag="VIS53_03860"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY5766951.1"
                     /translation="MQNSKTRTATHGPWLVGLGAALWGTESAWRIPLNELFDAKVIVF
                     WEHVFILIMFLPILISRLDEIPRVRARTWGFLIFSAFAGSAVGTIFFTLALKYGNPTV
                     VNVVLNIQPVISTLGAFLLFGDRLARQFFLYAGIAIVAGVFVSVAYPTQIGVSFERAG
                     LNVGTGYALICALFWGLSTVAGRGVMVGMSLRLASSMRIVIGLICMTLILLVYGKLNG
                     AALWSEAAQAHPVKAIVLLFFLASISGGIPLLFYFQGLHLTRASTAGYFEMMQTLAAV
                     CITWGFFHASLHPHQVIAAVVLIAAVAMVHHIQQKVEPHN"
     gene            1275..1835
                     /gene="nrdR"
                     /locus_tag="VIS53_03865"
     CDS             1275..1835
                     /gene="nrdR"
                     /locus_tag="VIS53_03865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY5766952.1"
                     /translation="MRCPKCGSRDDKVIDSRQSRDGSSIRRRRQCLKCKYRYTTYEEI
                     ERSDLRVIKSNRTHEPFDRRKLAASIAKAFEKRSTSLLTLEDMVNDIVHELETGGREV
                     PSSVIGARVLEKLRGIDEVAYLRYASVYQRFQDVDQFVDAIHTLGRRIKPNALQRELF
                     PAETTKENANVARHSREGAIKNHGRV"
     gene            1822..2382
                     /locus_tag="VIS53_03870"
     CDS             1822..2382
                     /locus_tag="VIS53_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766953.1"
                     /translation="MVAFKEEFPYLRTTSGQLFEFNRDWLHAALTRAANEAGYPGWWL
                     TEHVTESIAFYLHLRNDENVVAFNQLSQTVRDVLEAIGYKEICRHFTPAPPPVSISLV
                     EIAYCAGAGYELAFFGLLEKRIDALIEAGADNLRLSSLQVCVKHLRGTKTWTRACDAL
                     REEIVCFVREKLAFATDRARLDCSLR"
     gene            2399..2734
                     /locus_tag="VIS53_03875"
     CDS             2399..2734
                     /locus_tag="VIS53_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEY5766954.1"
                     /translation="MTIFEKIIARQIPAKIIWEDEDAIAFHDVDPQAPVHVLIVPKKA
                     VSRLADATDEDAALLGKLLLVARNVAKELELSSGYRVVINCGPDAGESVPHLHVHLLG
                     KRALAWPPG"
     gene            complement(2752..3039)
                     /locus_tag="VIS53_03880"
     CDS             complement(2752..3039)
                     /locus_tag="VIS53_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766955.1"
                     /translation="MKLLKIKTARFSQITEKCGKPQVYTLWQKPSADRHLQSQIKRTR
                     LMTILKSESGTDFGIVGFKESREAQYLIFPKSLKRFAEKRIIGIDWALVRE"
     gene            complement(3090..3184)
                     /gene="ffs"
                     /locus_tag="VIS53_03885"
     ncRNA           complement(3090..3184)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VIS53_03885"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(3413..3640)
                     /locus_tag="VIS53_03890"
     CDS             complement(3413..3640)
                     /locus_tag="VIS53_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766956.1"
                     /translation="MKVRTYAEARVINSGFCRLATKDFEVFRRTLFASYSSATKSPAA
                     FYPIERLENPAPFADKEFALSSAAQLEIVTQ"
     gene            3639..>4166
                     /locus_tag="VIS53_03895"
     CDS             3639..>4166
                     /locus_tag="VIS53_03895"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEY5766957.1"
                     /translation="MLHSKIYRFPFIRPSIPPVAEWVQYLEPAYRAKWFSNFGPVVRQ
                     LETQLTTRLCHPDEVITTANNCTAGISAALIALDVRGTVLIPAFTFPATMSAVIMAGA
                     KACVLDVDLETWCLSVALLEKTLRASKCGAVILVAPFGLRQDFSESLQICRRYNVPVL
                     IDNAAGLSGKGAAVLD"
BASE COUNT         1014 a         1113 c         1128 g          911 t
ORIGIN      
        1 aaacgaaaag taaggcgatc cgccgtaaac gaacagaagg acaacgcaga tgatcaccag
       61 ccagcggata agtttcattt ggagagcgat cagttatgag gttcgacctt ttgttggata
      121 tggtgcacca tcgccaccgc agcaatcaga acgacggccg cgattacctg atgtgggtga
      181 agactggcgt ggaagaaacc ccaggtgatg caaactgcgg cgagcgtttg catcatttcg
      241 aagtaaccgg ctgtggatgc gcgggtgagg tgcagtcctt gaaaataaaa tagcagcgga
      301 atcccgcccg aaatcgacgc gaggaaaaac agcaacacga tggcctttac tggatgcgct
      361 tgcgcggctt ctgaccagag cgctgcgccg ttcagttttc cgtagaccaa aagaataagc
      421 gtcatgcaaa tgagtccaat cacgatgcgc atgctcgagg cgagtcgcaa tgacatgcca
      481 accattacac cgcgtccggc gacggtagaa agaccccaaa acaacgcaca gatcagggcg
      541 tagcctgtcc ccacgttcag acccgcgcgt tcaaatgaaa ctccgatctg tgtcggatac
      601 gcaaccgaca caaacacgcc tgcgacaatt gcgatcccag cgtaaaggaa gaactggcga
      661 gcaaggcgat cgccaaaaag caggaacgcg ccgagcgttg agataacggg ctgaatattc
      721 agaaccacgt ttaccaccgt cgggttgccg tacttcaacg ccagcgtgaa aaagatggtc
      781 cccaccgcgg aaccggcaaa cgccgagaaa atcaaaaacc cccatgtgcg cgctcgcact
      841 ctcgggattt cgtccagtcg cgagatcaga atcggcagga acatgatcag gatgaaaacg
      901 tgttcccaaa aaacgattac ttttgcgtca aataattcgt ttagcgggat gcgccacgcg
      961 ctttctgttc cccacagcgc agcacccagg cccaccaacc acgggccatg ggttgcggtg
     1021 cgtgttttgc tattttgcat cggaacgggt gtaacgttcg ggactggctg cgtcaacggg
     1081 atgaatcccc gatcagaagc gatgcgagga cgcactccaa aaagcatgtg cgtgcgaata
     1141 acgagctcaa accaattttg cgaaagcttt ggagtgcgcg cgcgccctcg ccgcttttat
     1201 cacgacagct ccacaaaaca atcaaacaaa gattgacgcc acaatttatg gtgtggtaat
     1261 tagcctcaga cactatgcgt tgccccaaat gcgggtcgcg tgacgataaa gtcatcgatt
     1321 cccgtcaatc gcgcgacggt tccagcatcc gtcgtcgccg ccagtgtcta aagtgcaaat
     1381 accgttacac gacctacgag gagatcgagc gttcggacct gcgggtgata aaaagcaaca
     1441 gaacacacga gccgttcgac cgtcgcaaac ttgctgccag catcgccaaa gcttttgaaa
     1501 agcgttccac gagtctgctt acgttggagg acatggtgaa cgacatcgtt catgaactcg
     1561 agaccggcgg acgcgaagtt ccctcttcgg tgatcggcgc gagagtgctc gaaaagctgc
     1621 gcggaattga tgaggtcgct tacttgcgtt acgcctcggt ttaccagcgt tttcaggacg
     1681 tcgatcaatt cgtggatgcc atccacacat tgggacggcg aataaaacca aatgcgctgc
     1741 aacgggaatt atttcccgct gagacaacga aagagaacgc gaacgtcgcc cgccattcgc
     1801 gcgagggcgc aatcaaaaat catggtcgcg tttaaggaag aatttccata tctccggaca
     1861 acctcgggac aacttttcga gttcaaccgc gactggcttc acgcggcgct cacccgggct
     1921 gctaatgaag cgggttaccc cggctggtgg ctcaccgaac acgtgaccga aagcattgcc
     1981 ttttatctgc acctgcgaaa tgacgaaaac gtcgttgctt tcaaccaact gtcgcaaacg
     2041 gtgcgggacg tgttagaggc aatcggatac aaggagattt gtcggcactt tacgcccgca
     2101 ccgccgcccg tttctatttc gttggtggaa attgcttatt gtgccggtgc gggctacgag
     2161 cttgcgtttt tcggtctatt ggaaaagcga atcgacgcct tgatcgaagc cggcgctgac
     2221 aaccttcggc tttcgtcgct gcaagtttgt gtgaagcatc tccgtggcac gaaaacatgg
     2281 acgcgtgcct gcgacgcatt gcgcgaagaa attgtctgct tcgttcgcga aaaactggcg
     2341 ttcgctactg atcgggcgcg gcttgattgt tcgctgcgct aatgaaacgc tagggttcat
     2401 gacgattttc gaaaaaatta tcgcccgcca aattccggcc aagatcattt gggaagacga
     2461 ggacgcgatt gcgtttcacg acgtcgatcc ccaggcgcca gtgcatgtcc tgatcgtgcc
     2521 gaaaaaagcc gtttcgcgtc tcgcggacgc gaccgatgag gacgccgcgc tgctcggcaa
     2581 actgcttctg gttgcgcgca atgtggcgaa ggagttggag ctctccagcg gctatcgagt
     2641 cgtgatcaac tgcggaccgg acgcaggtga gagcgtgccc catctgcatg tgcatttact
     2701 cggcaaacgc gcactggcgt ggccgcctgg ataaagctgt ctttaaacgg gttactcccg
     2761 gacaagcgcc caatcgattc caatgatgcg cttttccgca aagcgcttta gtgattttgg
     2821 aaagattaga tattgcgctt ccctgctttc cttaaagccg acaatcccga aatcggttcc
     2881 gctttcgctc ttcaggattg tcatcaaacg ggttcttttg atttgcgatt ggaggtggcg
     2941 gtcagcggac ggcttctgcc acagcgtgta gacctgcggc ttaccgcatt tttcggttat
     3001 ctgggagaag cgcgccgttt taatcttgag aagtttcatt gcgaatcgct ggaccggcca
     3061 gaccgagtga agcggtttac caaaaagaag cccgccagag aactacggca aggaggatca
     3121 tactaccgtt gctgcattcc tgccctggcg ggatttgtaa gtcctcaatc catagcccct
     3181 gacggaggag aaatttcctc gcgccagagc gatgcgcaac tccaaaacgc agcgccgggt
     3241 cgatgccatt gtgtgcgcgt gtcggtaaac gcatcagcgc attgacagtg cgtcgtttta
     3301 ccaagggagc gtgtagtctg ttgactaaca gttgacaaat agcgcatctt ttcgtcacta
     3361 tgcgcacaac aaggctcgct ctcacaaaaa ccaaggtcaa cggccggcgg tactactgcg
     3421 tgacgatttc cagctgagcg gcggaagaaa gcgcaaattc tttatcggca aacggcgcgg
     3481 ggttttccag acgctcgatg ggataaaatg ctgcaggcga cttcgttgcc gaagaatatg
     3541 atgcgaaaag cgttcggcga aatacctcaa agtccttcgt tgctaaccgg caaaaccctg
     3601 aatttatgac ccttgcctcg gcataagtcc gaactttcat gttgcattcg aaaatatacc
     3661 gatttccctt cattcgcccg tccattcctc cagttgcaga atgggtgcag tatctggaac
     3721 cggcatatcg cgcgaagtgg ttttcgaatt tcggaccggt cgtacggcag cttgaaaccc
     3781 aattaaccac acggctatgt catcccgatg aggtcatcac cacagcgaac aactgtaccg
     3841 ccggcattag cgcggcactc atcgcgttgg acgtgcgtgg cactgtcctt attccagcat
     3901 tcacctttcc tgcgaccatg tctgcagtca tcatggctgg tgcgaaagca tgcgttttag
     3961 atgtagatct tgagacttgg tgcttgtcgg tcgcactact agagaaaacc ttgcgcgcgt
     4021 cgaagtgcgg cgcggtcatc ctcgtcgctc cttttggatt gcggcaggat ttttccgaga
     4081 gcttgcaaat ttgccgacga tacaatgtgc cggtgctgat tgataatgca gcagggctta
     4141 gcggaaaggg ggcagctgtg ctcgat
//
LOCUS       DATDAJ010000163         6642 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_966664, whole genome shotgun sequence.
ACCESSION   DATDAJ010000163 DATDAJ010000000
VERSION     DATDAJ010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6642
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966664"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1269
                     /locus_tag="VIS53_03900"
     CDS             <1..1269
                     /locus_tag="VIS53_03900"
                     /inference="COORDINATES: protein motif:HMM:NF024755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEY5766958.1"
                     /translation="SGLIKTKDDEQTSNLNPRTSYDRFRGRIMFPICNDVGEVIAFSG
                     RLLKDGEGAAKYLNSPETPLFRKGNVLFGLHKSKRALIEANSAIVCEGQLDLISLFEA
                     GITNVVAPQGTAFTENQARILKRFADEVVLCFDSDAAGAKAAERSLDALLENDFIVRV
                     VELPPGEDPDSLVRRDGKEQFEKRVANARDFFDYWIEREIASVDLTSMGAKIQAARNL
                     AATVSRVHDPVLRGEVVSKASARLGVAPADFESLLAKHARASSGRVDLSTTETHAAAS
                     PPHDIVMLCLLALRDVDARNFLHAQNWREILEQVPDTDILIRILESELKPDDVASLNA
                     FMATLSPEEERLISSWLMQKMPAATETVIEKWWQGTCQSVVRRRLETAKNRIKVSGLS
                     AGEVLNLQKQILDLQEQLHEFPRPVGRGDT"
     gene            1529..3178
                     /gene="rpoD"
                     /locus_tag="VIS53_03905"
     CDS             1529..3178
                     /gene="rpoD"
                     /locus_tag="VIS53_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEY5766959.1"
                     /translation="MPALGVTSLYSSVEVQARIRELIKLAKEQGYLTFDDLNEALPEG
                     VTDADELDLILTRLRRLEIDIIEASEVDRYRDGKKDVDEEEEEEEGRATPKVDILDDP
                     VRMYLKQMGQVPLLTRDQEVQISKRIEEAEAMVQKHLSRFGFVARGHLELAQKLIENR
                     ERFDRVILDKKIESRERYMKNLPRLCKQVEQLSASIDRHFSEVVRDLSKRASQKRRTL
                     QRTMATLQKIYPRFYLKQRVTEEFVHLADEAHHTSLYLQTELAKNPRSKKRRLQLQNK
                     IRHLEISLWFSVSDYSEEYRTLKSWLRQAFKAKTEMVEANLRLVISIAKKYTNRGLSF
                     LDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIET
                     INKLLRVHKQLVQEYGREPTPEDVAEEVLLPVDRVRAVLKMAQQPISLQSPVGESEET
                     NFGDFIEDRGAENPSDMTAIVLLKEKIKDVLETLTDRERQVLEQRFGLVDGYSRTLEE
                     VGRQFQVTRERIRQIEAKALRKMRHPTRIRQLEGFLEAPGI"
     gene            3245..3598
                     /locus_tag="VIS53_03910"
     CDS             3245..3598
                     /locus_tag="VIS53_03910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766960.1"
                     /translation="MEPQDDKELWDILGRLPKPTLSPFFARNVLRKIRQKPTRFAWAR
                     NWFSMRKVVGVSAVAAVFVAVAFVTHYPGPRTTSSSDSEVVAKIDPQDYDVVADLDAL
                     IAWDENSVWEDRPTL"
     gene            3828..4181
                     /locus_tag="VIS53_03915"
     CDS             3828..4181
                     /locus_tag="VIS53_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766961.1"
                     /translation="MPPDARQNFQRNAQLWMQMTPEQRNLMRQREDMRRQIMTRDADA
                     AVRDSGLQLNPQERARFESRYIQERRKVEQSLRQQIQTERQKEIPALIQQLRKEFQID
                     EPGKSPVSKPAPSPK"
     gene            complement(4295..4552)
                     /locus_tag="VIS53_03920"
     CDS             complement(4295..4552)
                     /locus_tag="VIS53_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766962.1"
                     /translation="MKKLLLIAVVAGGFMVAGTTRSDAQVYFSIGFGPGYYGGYYPYG
                     NYYPYRYYARPYYRSYYRPYYRYGGHRYYRNHYRYPYRYRY"
     gene            complement(4603..5634)
                     /gene="ribD"
                     /locus_tag="VIS53_03925"
     CDS             complement(4603..5634)
                     /gene="ribD"
                     /locus_tag="VIS53_03925"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEY5766963.1"
                     /translation="MRTHRDEEFMRAALAEAKKALGRTSPNPVVGAVLVIDNRVVAKG
                     HHTEAGGAHGEIDCLRDFGAPIPAHATLYVTLEPCSTAGRTAPCTDAIIKAGLKSVVI
                     GAIDPNPRHSGRGIIKLRNARVRVRDGILAEECTRLNEAFNKWIVTGRPFVIAKCGMS
                     LDGRLTRPPGESRWITGVEARRDTRQLRARMDAVLIGAETVRADNPRLTVRGVRRARQ
                     PWRVVLTRSGQLPRQTRVLSDKFAARTLIYKRKSLASVLKDLGKRGITSVLIEGGGKV
                     LGEVLDKRLIDKVKIYLGPILTGGPVIAFPGEGVEKTADALRLRDIEYEQIGQTVSLT
                     GYPDVPSGE"
     gene            complement(5657..5730)
                     /locus_tag="VIS53_03930"
     tRNA            complement(5657..5730)
                     /locus_tag="VIS53_03930"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5694..5696),aa:Arg,seq:tcg)
     gene            complement(5832..5903)
                     /locus_tag="VIS53_03935"
     tRNA            complement(5832..5903)
                     /locus_tag="VIS53_03935"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5869..5871),aa:His,seq:gtg)
     gene            5998..>6642
                     /locus_tag="VIS53_03940"
     CDS             5998..>6642
                     /locus_tag="VIS53_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766964.1"
                     /translation="MDRKSLPSRLGKAPGHRVARCRAAWLAAAFFFAATMLALAQQDD
                     PSEIFLKAYLSAQQGEKLERQDRFKTALAKYRFAGSLIEELRKSHAQWQPAVVEYRGR
                     KISEGILRLQERITRQTQLNASASPLPDIAPAAPESDAWSEPGPEALAPQPRETVTER
                     SRDTSVKVATKNLRDKVAELQAALDKAHGDLETARKEKEVVDTRLNETNSKLERT"
BASE COUNT         1636 a         1780 c         1851 g         1375 t
ORIGIN      
        1 agcggcctta tcaaaacgaa ggacgacgaa caaacatcaa acctcaaccc tcgaacttcg
       61 tatgatcggt ttcgcggccg gatcatgttc cccatctgca acgacgttgg cgaagtgatc
      121 gcgttcagcg gccggttgct aaaagacggg gaaggcgcgg cgaaatacct gaactcaccg
      181 gagacaccgc ttttcagaaa aggcaacgtc ctttttggat tgcacaaatc caagcgtgcc
      241 ctgatcgaag cgaactctgc gattgtgtgc gaaggccagc tcgatttgat cagcttgttc
      301 gaggcaggga tcacgaatgt cgtcgcgcca caggggactg cgttcacaga aaatcaggcg
      361 cgcatcctga agcgctttgc ggacgaagtg gttctgtgct tcgattcgga cgcagccggc
      421 gccaaagcgg ccgagcgctc gctcgatgca ctgctggaaa acgattttat cgtccgcgtc
      481 gtggagttgc cgccgggcga agaccctgat tcgctcgttc gccgcgacgg gaaggaacag
      541 ttcgaaaaac gcgtcgcgaa cgcgcgagat ttttttgatt actggatcga gcgagagatc
      601 gcgagtgtcg acttgacttc catgggcgca aagattcaag ccgcgcgcaa tttagcggcg
      661 acggtatcgc gagtacacga tcctgtcctg cggggagagg tggttagcaa agcatcagcg
      721 cgcctcggtg ttgcacctgc cgatttcgaa tcacttctgg caaagcacgc tcgcgcgtca
      781 agtggccgtg tggacttgag cacaactgaa actcacgccg cggcgagtcc accgcatgat
      841 attgtgatgc tttgcttgct ggcgttgcgg gatgtagacg cccgcaattt ccttcacgcg
      901 caaaactggc gtgagattct cgagcaagta ccggacacgg acattctgat ccggattttg
      961 gaaagcgaac tcaaaccgga tgacgtcgcg tcgctgaacg cgttcatggc tacgctttcg
     1021 ccagaggaag aacggctcat ttcctcatgg ctgatgcaaa agatgcccgc agccacagaa
     1081 acagtgatcg agaagtggtg gcaggggacc tgtcaaagtg tggtgcgtcg tcgtttggag
     1141 acggcgaaaa accggatcaa agtctctggg ttgagcgctg gtgaggtcct aaatttgcaa
     1201 aaacaaattc ttgacctgca ggaacagctc cacgaatttc ctcggcccgt cggcaggggc
     1261 gacacctagg tgtcttcaac tgccgtgtgg caggccgaag gtcctagacc aaattcttaa
     1321 ccaaacaaac ttggccaggc attcgaaacg aagggggagc agccgacagt cgtcggctcg
     1381 tcggcttaaa agcagccgtg gccgcagtgt accgaaaaga cgtttgaatt cgcaaggaaa
     1441 tcacagcaag ccgccgcgac tcaattctcg gaagcggacg cgtaccaaga cttcgtcaca
     1501 aggacgcaac cacaatggac ctctttcgat gccggctctc ggagtaacga gtttgtattc
     1561 ttctgtggaa gttcaagcgc gtattcgaga gctgatcaaa ctggcgaaag aacagggtta
     1621 tctcacgttc gacgatctga acgaggcgtt accggaagga gtcaccgacg ccgatgaact
     1681 cgatctgatt ctcacgcgtc ttcgccggct ggagatcgac atcattgagg cttccgaagt
     1741 tgaccggtac agggacggca aaaaagacgt cgatgaggag gaagaggaag aagagggcag
     1801 agcgacaccg aaggttgata ttctggatga tccggtgcgc atgtatttga agcagatggg
     1861 acaggttccg ctgctaactc gagaccagga agtccagatc tcgaagcgaa ttgaagaggc
     1921 tgaagcgatg gtacaaaaac atctcagtcg cttcgggttt gttgcgcgtg gtcatctcga
     1981 actagcccaa aaactcatcg aaaaccggga acgattcgat cgcgtgatcc tggataagaa
     2041 aatcgagagc cgtgagagat acatgaagaa cctgccacga ttgtgtaagc aggtggagca
     2101 attgagcgca tcgatcgatc ggcacttttc cgaggttgtc cgcgatctgt caaaaagagc
     2161 gtcacaaaag cgcaggacac ttcaaagaac gatggcgaca ctgcaaaaga tttatcctcg
     2221 tttttaccta aagcagcggg tgaccgagga atttgtgcac ctcgccgacg aggcgcatca
     2281 cacgtcgcta tatctgcaga ccgagctcgc caaaaatcct cgcagcaaaa aacggcggtt
     2341 acagcttcag aacaagatcc gccatttgga aataagcctg tggttctccg tttccgatta
     2401 ttccgaggaa tatcggacgc tgaaaagctg gctgcgccag gcattcaagg ccaaaaccga
     2461 aatggtcgag gccaatcttc gtctcgttat ttccatcgcg aagaaatata ccaatcgcgg
     2521 tttatcgttt ctcgacctga tccaggaagg aaacatggga ttgatgaagg cagtcgagaa
     2581 gtttgagtat cggcgcggat acaagttttc gacctatgcg acttggtgga ttcgtcaggc
     2641 gattacccgg tccatcgccg accaggcgcg cacgatccgt attcccgtgc acatgattga
     2701 gacgatcaac aaactgttgc gcgtgcacaa acagctggtc caggaatacg ggcgggagcc
     2761 gacgcctgag gacgtagctg aggaagtttt gctgccggtg gaccgggttc gggccgtgct
     2821 aaagatggca cagcaaccga tctcgctgca gtcaccggta ggcgagagcg aggaaaccaa
     2881 ttttggtgat ttcatcgaag acagaggcgc cgaaaatccg agcgacatga ctgcgatcgt
     2941 tttgcttaag gaaaagatta aggatgtctt ggaaacgctc acggaccggg aacggcaggt
     3001 cctggagcaa cgatttggtc tcgtcgacgg atacagccgc acattggaag aagtagggag
     3061 acagttccaa gttactcgcg agcggatccg ccagatcgag gcaaaggcct tgcgcaaaat
     3121 gcggcatcca acccggattc ggcagctgga aggtttcctt gaagcgccgg gaatttgaat
     3181 ataattttcg actgcgttcg agcgcaactt cgaggcatgc agactgttga atcggatgga
     3241 caacatggaa cctcaagatg acaaagagct gtgggatatt ctcggtcggc ttcctaagcc
     3301 cacgctttcg cctttttttg cccggaatgt cctaagaaaa atccggcaga aaccgacccg
     3361 tttcgcgtgg gcgcggaact ggttcagcat gcgaaaggtt gttggagtgt cggccgtggc
     3421 agcggtgttt gtcgcggttg cttttgtcac gcattatccg ggtccgcgga caacgtcttc
     3481 gagcgactca gaagtagtag ctaaaatcga tccacaggat tatgacgtcg tggctgatct
     3541 ggatgcattg atcgcctggg atgaaaatag tgtgtgggaa gataggccaa ccttgtaagt
     3601 tcttcgtcgg tttggcggct tttgctctgt cttgcgctta cgcgcaagca cagccacaac
     3661 aacaacatcg cggcccggtt ggtcgcccgc cgccaatgtc ggcacctcat ggaccggcgc
     3721 aaatggcagc gcctcacggg ccaccgccaa gtcaacctcg tggaccgtca tcgggtcagc
     3781 ctcagaggcc accttcacgg cagagcgtaa gggaacgctg gctcgcgatg ccgccagatg
     3841 cccggcaaaa tttccagcgc aacgcccagc tttggatgca gatgactccg gagcagcgca
     3901 acctaatgcg tcaacgcgag gatatgcgac ggcagattat gacgcgcgac gcagacgcgg
     3961 cagttcgcga ctcgggtctt cagctgaatc cacaggagcg cgctcggttt gaatctcgct
     4021 acattcagga acgccgaaaa gtcgaacaat cgctccggca gcaaatccaa acggagaggc
     4081 aaaaggaaat acccgcactc attcagcagt tgagaaaaga attccagatc gatgagccgg
     4141 gcaaaagccc tgtgtccaaa ccggcgcctt cgccaaagta agaaaataga accgcctgtc
     4201 tcgcgccgct gaatctcctc agcgaagttt ctgctcgaaa aattaggctg gctcgaaata
     4261 gtcgagccag cccggtgtgg ctattccggt caaactagta ccggtaacga tagggataac
     4321 gatagtgatt gcgataataa cgatggccgc catatcggta gtacggccga taataggatc
     4381 ggtaataagg tctagcgtaa taccggtacg gataatagtt cccgtaaggg taatatcctc
     4441 cgtaatagcc cggcccgaag ccgatactga agtaaacttg agcatcagaa cgcgtcgtcc
     4501 ccgcgaccat aaaacccccg gccacgactg caattaacag aagtttcttc atgatttcac
     4561 ctccgactaa tttaacaggg gaatcgctgg aaagtttcct agttattcgc cactcggaac
     4621 gtccggatac cccgtgaggg agacagtttg accaatctgc tcatattcga tatcgcgcag
     4681 ccgtagcgca tcagcagttt tttctactcc ttctccgggg aatgcgatta ccggtcctcc
     4741 agttaagatc ggccccaaat agatcttcac tttgtcgatg agccgcttgt cgagcacctc
     4801 accaagaact ttgccgccac cctcgatcaa cacgctggtg atgccgcgtt tacctagatc
     4861 cttcagcacc gatgccagag attttcgttt atagatcaaa gttctggcag cgaatttgtc
     4921 ggacaagacg cgagtctggc gtggcagctg acctgagcgg gtcagcacaa cgcgccacgg
     4981 ttgcctcgcc cggcgcacgc cgcggacagt caaacgcgga ttgtcggctc ggacggtttc
     5041 cgctccaatg agcacggcat ccatgcgtgc gcgcagctga cgtgtgtcgc gtcgagcttc
     5101 cactccggtg atccaccggg attcaccagg cgggcgcgtc aatcgtccat cgagagacat
     5161 gccgcatttt gcgattacaa agggccgtcc cgtgacgatc catttgttga acgcttcgtt
     5221 aagccgcgtg cactcttctg ccaagatccc atcgcgcact cggacacgtg cgtttcgcaa
     5281 tttgataatg cctctgccgg agtggcgcgg atttggatct atcgcgccta tgacgacgct
     5341 tttaagtcca gccttgatta tcgcatcggt gcacggcgca gtgcgcccgg cggtcgaaca
     5401 cggctccaaa gtcacgtaga gcgtagcatg cgcgggaatc ggtgccccga aatcgcgtaa
     5461 acaatcaatc tcaccatgag cgccgcctgc ttcagtatga tgtcctttcg ccactacacg
     5521 attatcaatg accaggacgg ctcctacaac ggggttgggg cttgtccggc cgagtgcctt
     5581 ttttgcttca gccagggcag cgcgcatgaa ctcttcgtct cggtgggtcc tcatgatgca
     5641 ggcaaatcaa acaacacgtg cctggaggga ttcgaacccc caaccttctg atccgaagtc
     5701 agaagctcta tccagttgag ctacaggcac tgtgaaattt gcgattttca atctcagatt
     5761 tccgattgga tgtaatcttg tcgatctttg cgtttaaatc gacaatgggc attcgaaaac
     5821 ctaaaatacc gggtggccga cgggactcga acccgcaaca accagaacca caatctgggg
     5881 ctctaccatt gagctacggc caccacaatt taagcgaaac agagtttagg attcccattc
     5941 tgctttgcaa acaaagggct cgacttttcc cgtcggcccc actaattgtc agcgccggtg
     6001 gaccggaaat ctctccccag ccggttaggt aaggccccgg ggcatcgtgt cgcgcgatgc
     6061 agggcggctt ggctcgcggc cgcatttttc tttgccgcaa cgatgctcgc tctcgcgcaa
     6121 caggacgatc caagcgaaat tttcctcaaa gcttatctct ccgcgcaaca gggcgaaaaa
     6181 ctcgagcgcc aggaccgatt caagactgcc ttggccaagt atcggtttgc cggcagcttg
     6241 attgaggaac tgcgcaaatc gcacgctcag tggcagccag cggttgtgga atatcgcggg
     6301 cgcaagatca gcgaagggat tttgagactt caggagcgaa tcacaaggca aacccaactc
     6361 aacgccagcg ccagtccgtt gcccgacatt gcgcccgcag cgcctgagag tgacgcctgg
     6421 tctgagcctg gtcccgaagc cttggcgccc caacccaggg agaccgtcac agagcggtcg
     6481 cgggatacct cagtcaaagt cgccacaaag aacttgcgcg acaaagtcgc tgagttgcaa
     6541 gcggcactcg ataaggccca cggggatctg gagacggcgc gaaaagaaaa agaagtagtc
     6601 gatactcgtt tgaacgagac aaattccaaa ctggagcgaa cc
//
LOCUS       DATDAJ010000164         6678 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_968210, whole genome shotgun sequence.
ACCESSION   DATDAJ010000164 DATDAJ010000000
VERSION     DATDAJ010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6678
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968210"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..440
                     /gene="cutA"
                     /locus_tag="VIS53_03945"
     CDS             120..440
                     /gene="cutA"
                     /locus_tag="VIS53_03945"
                     /inference="COORDINATES: protein motif:HMM:NF015077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEY5766965.1"
                     /translation="MAEKILLALSTFPDRETARDISNALVTKKLAACANILPAVESIY
                     RWKEQIESGNETLVLFKLSEDSQSAFQKELRSLHPYEVPEIIFVPISSGLPEYLRWVT
                     ENCS"
     gene            complement(437..1855)
                     /locus_tag="VIS53_03950"
     CDS             complement(437..1855)
                     /locus_tag="VIS53_03950"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY5766966.1"
                     /translation="MRTELQRAEEKVETRSESLKKPLGLFDLVLTQILFVVGSSWVGA
                     AAKLGQAHLFFWLLAILLFYIPQAAVVIYLSNRMPLEGGIYQWAKLGFNEFAGFIVAW
                     NLWLLSITVIALGGMFVTTNISYAIGDSAAWMPHSKWCVSLVSCAMVLGLGLIAVRGL
                     SLGKWVHNIGGFAMLAVYAALVALPFIALMRGDLKTYHPLVLAAPTMSMFYCVNIFTK
                     LSVGALSGFEYVAILAGETRSPARDIGRSVMIASPVIALAFILGTSSVLAFIGDKPID
                     LIGPVPQTLRLGLRFFPIASAIASIAIILMTIRTIASTSVHVTGSSRLPMVAGWDRLL
                     PSWFSHLHAKFKTPINSVIFVSALTVTIAIVSQIGTGIQEAFQLVDNAANVFYGIVYF
                     TMFAIPIFGASAIRSGAPIWLRITAICGAAVSLSAIFFTIYPIIDVPSPLSFAVKIIA
                     VTGIANAIGVAIYLVGKKRRRG"
     gene            complement(2007..2513)
                     /locus_tag="VIS53_03955"
     CDS             complement(2007..2513)
                     /locus_tag="VIS53_03955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766967.1"
                     /translation="MIDSIFRGLQQPEYVHVLLNPLPVYGLLIAWIGLLIAFFLKSRR
                     AQIAALVLVLISSLSAWPVYEFGQQGYDRVLSMTDEDGERWLDEHQDRADDLIWIFYA
                     LAVLSAIAIAAPIKWPKSSAPLVTAVIFLAAGTLGTGVYVAYAGGKIRHREFRNQPAP
                     PKRSEHEH"
     gene            complement(2510..3172)
                     /locus_tag="VIS53_03960"
     CDS             complement(2510..3172)
                     /locus_tag="VIS53_03960"
                     /inference="COORDINATES: protein motif:HMM:NF013586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY5766968.1"
                     /translation="MQKFNVYICRLGAIAMALISVNANADAILVDVRSVDPTISVELR
                     YAGRKNFLGHPLYPRGTHALARPEVASALATAQSFLRRYQYGLKIWDAYRPVAVQAML
                     WQASHNDDYVANPEVGAGSLHSWGIAVDATLIDSRTRDVRMPTDFDDFTPAAMLPYMG
                     SSYEIRWNLRLLRYAMHKAGFCGLRTEWWHFTIVDWQKYVPPEKAKSTAQLLGTHSEG
                     GL"
     gene            complement(3186..5111)
                     /locus_tag="VIS53_03965"
     CDS             complement(3186..5111)
                     /locus_tag="VIS53_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766969.1"
                     /translation="MSFFRTGFRELALKVKRQKTRMALRHDRRLLQRSEINLGREGTA
                     QAANFPELRNEIVALKKLEQEQKEVALRIARIDEGIKRIEEERQQIAREQANAIAKLE
                     AEKKPLLNKRNQARSTAEVCERELAGVERRVQESEAADRDLLKQLSDLHALDPAPPDL
                     EALSAGIMAKRARLPDERAELVRARLGSTDAVRMAKEKLNTADSELAAVEKNMARTRS
                     EFEGRDRKLAESIKTQQQAARDARTRHQTVEERKNPAYLSIGRHLSEKGVAPPNAPHL
                     LEEAHRRRRAVDLQLKHQAELAQLSSQIDKQELRKFYFSAFSVLVLLAITSLVVFQSP
                     RGREWLPQETDTILSINADQFERANLAKRWRDAKPRLLPGLIGAAASVPGLNPSRDTA
                     RITRALTTDETGETKEFNLVQSRRGLAKVIRTVADDKNFRRRSINGLPVWERQSGSDE
                     PPPQGSGVPGATTRKPDFALARVGPATLAVGAPQQVDELVLVRLGMKPDLKITGQLFD
                     RFQSLDHESALRLISRDPRDLSRVFHPIFSPELLDTSQLIGLAVNLQNPVKARILIKV
                     NAPKNATDVARDLRTNQDQWLRLPDSPLLLYSQPPEIQTQGNSNLELRFMMPEDSARL
                     LLERLAKMDTPAAVTAY"
     gene            complement(5202..>6678)
                     /gene="acs"
                     /locus_tag="VIS53_03970"
     CDS             complement(5202..>6678)
                     /gene="acs"
                     /locus_tag="VIS53_03970"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF001208.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEY5766970.1"
                     /translation="ARVGAVHSVVFGGFSSDSIRDRINDSGAIALITADGSYRRGGIV
                     PLKKNVDDALRDGTSVRRVIVFRRAANDIHMEEGRDVWWHRELEYVDANCPPAPLDSE
                     HPLYLLYTSGSTGKPKGILHTTGGYLVNVYCTTKYVFDIRDEDIFWCTADVGWVTGHS
                     YIVYGPLANGATVVMYEGAPNWPEPDRFWRIIEEYRVNILYTAPTAIRAFIRWGDDWV
                     RKHDLSSLRLLGSVGEPINPEAWMWYHKTIGGGRCPIVDTWWQTETGSIMITPLPGAT
                     PTKPGSGTLPFFGVDPAVVDQKGQEVGPNIGGKLIIRRPWPSMLRTIYGDNARYRQQY
                     WSEFKGNYLTGDGARRDEDGYFWIVGRIDDVLNVAGHRLGTSEIESALVSHPRVAEAA
                     VVGRPDELKGQGVVAFVTVKSGIEVSRGLKEELRDHVSKHIGAIAKPDEVRFAETLPK
                     TRSGKIMRRLLKEIASGAKVTGDTTTLEDFSVLAKLAAPEE"
BASE COUNT         1468 a         1871 c         1895 g         1444 t
ORIGIN      
        1 catctacgcg tcatcctgag gccggaaagc tttcggggtc gaaggagccc gcgatcgtag
       61 cgtgaggtaa tgtcacgggg ttcttcgact tcgctcggaa tgactgtgtc acgtagcaca
      121 tggctgaaaa aatccttctc gcgctaagca cctttccgga tcgggaaacc gcgcgggaca
      181 tttcgaatgc gctcgtcacc aaaaagctcg cagcctgcgc gaacattttg cccgcggttg
      241 aatcgattta ccgctggaaa gagcaaattg aatctggaaa cgaaaccctc gtgctgttca
      301 agctgagcga ggatagccaa tcagcgtttc agaaagaatt gcgctcattg catccctacg
      361 aagttccgga aatcatcttc gtaccaattt cgagcggcct gcccgaatat ttgcgctggg
      421 ttaccgaaaa ctgcagttag ccgcgccgac gtttcttgcc aacgagataa attgcgacgc
      481 caatcgcatt cgcaattccg gtcacggcaa taattttcac ggcgaaactt aacgggctcg
      541 gcacgtcgat aatcggatag atggtgaaaa aaatcgcgga cagcgagacg gcagcaccac
      601 agatcgccgt aatgcgcaac cagatcgggg cacccgaacg aatcgcactc gcgccaaaaa
      661 tcggtatggc gaacatcgta aagtaaacaa taccgtagaa aacgttcgcg gcgttatcga
      721 ccaattgaaa tgcttcctga atgcccgtgc cgatctggct cacgatggca atagtgacgg
      781 tgagcgcgct gacaaaaatg accgagttta tcggcgtttt gaatttcgca tgcagatgcg
      841 agaaccagct cggcagcaat cgatcccagc cggcgaccat tggcaatcgc gaactgccgg
      901 tgacgtggac gctcgtggac gcgatcgttc gaatggtcat caagataatg gcgatggacg
      961 cgatcgcgct tgcgatggga aaaaatcgca agcccaggcg cagcgtttgc ggcaccgggc
     1021 cgataagatc gattggtttg tcgccgatga atgcgagcac tgaactggtg ccgagaatga
     1081 acgcgagcgc gatcaccgga gacgcgatca tgacggaacg accgatatcg cgcgcgggtg
     1141 aacgtgtttc gccggcgaga atggcgacgt actcaaatcc gctgagagcg ccgaccgaga
     1201 gttttgtgaa aatgttgacg caataaaaca tggacatggt cggcgcggcg aggacgagcg
     1261 gatgatatgt ctttaaatcg ccgcgcatca gcgcgatgaa cggcagtgcg accagcgccg
     1321 cataaactgc aagcatggca aagccaccga tgttatgcac ccatttgcct aacgaaaggc
     1381 cgcgcacggc aatcaagccg agaccgagga ccatcgcgca actcaccagc gagacgcacc
     1441 atttgctgtg cggcatccag gcggcgctgt cgccgattgc gtacgagatg ttggtggtca
     1501 caaacatacc gccgagtgcg atgaccgtga tcgacagcaa ccagaggttc caggcgacga
     1561 taaatccggc gaactcgttg aatccgagct tggcccattg atagatgccg ccttcgagag
     1621 gcatgcgatt gctcaaataa atgacgacgg ccgcctgcgg aatgtagaag agcaaaatcg
     1681 cgagtagcca aaagaaaaga tgcgcttgtc cgagcttcgc cgcggcaccg acccaactcg
     1741 agccgacaac gaagagaatc tgcgtcagaa cgagatcgaa aagaccgagc ggtttcttga
     1801 gagattcgct gcgcgtttcg accttttcct cagcgcgctg gagttcagtt cgcatcggtc
     1861 aagcgttgaa gcggtgaagc gaacgtcatt ccgagcgaag tcgaggaatc ccgtgacagt
     1921 acggtgggta gtatcgcagg atccttcgac tccgctgcgc tccgctcagg atgacgacag
     1981 aaacccgcct caacgtttca ctattctcag tgctcgtgtt ccgatcgctt cggcggcgct
     2041 ggttggttgc gaaattcgcg gtgccggatt ttgccgccgg cataagcgac gtagacaccg
     2101 gttcccaacg tgcctgcggc gagaaagatt accgcagtga cgagtggtgc agacgatttt
     2161 ggccatttta tcggcgccgc gattgcgata gcactcaaga ccgcgagtgc gtaaaagatc
     2221 cagataagat cgtccgcgcg atcttgatgt tcatccagcc agcgttctcc atcttcatca
     2281 gtcatcgaca ggacgcgatc gtatccctgc tggccaaatt cgtacactgg ccaagcggaa
     2341 agcgaactga tgagtaccag cactaatgcg gcgatctgag cgcggcggct ttttaaaaaa
     2401 aaggcgatga gcaatccaat ccaggcgatg agcaagccgt aaaccggcaa cggattgagc
     2461 agcacgtgaa catactctgg ctgctgcaaa ccacggaata tcgaatcgat cacaatccgc
     2521 cttccgagtg agttcctaaa agttgtgcgg tactctttgc tttttcaggc ggcacatatt
     2581 tttgccaatc aacgatggtg aaatgccacc attcagtgcg taagccgcaa aaaccagcct
     2641 tgtgcatagc gtaccgcaac aaacgcaggt tccagcgaat ttcgtaagag gaacccatgt
     2701 aaggcaacat tgcggccgga gtaaaatcgt cgaagtccgt tggcatgcgg acgtcgcgag
     2761 tccgtgagtc gatcagagtg gcgtcgacgg cgatacccca actatgcaac gatccggcgc
     2821 cgacttcggg attggcaaca taatcatcgt tgtgtgacgc ctgccagagc atggcctgca
     2881 ctgctaccgg ccgatacgca tcccagattt ttaggccata ttggtaacgc cgcagaaagc
     2941 tctgagccgt agccaaagct gaggcgactt cgggacgagc gagtgcgtgt gttccacggg
     3001 gataaagcgg atgtcccagg aaattctttc ggccggcata gcgtaactcg accgagatcg
     3061 tcggatcaac ggatcggaca tcaaccaaaa tcgcatcagc atttgcgttc accgagatga
     3121 gcgccatcgc gattgcacca agccggcaaa tgtaaacgtt gaacttttgc attggccttg
     3181 ttcgatcaat acgctgttac cgctgcggga gtgtccattt ttgccaggcg ttcgaggaga
     3241 aggcgtgcgc tgtcttcggg catcatgaaa cgcaactcga gattggagtt gccctgtgtt
     3301 tggatctccg gcggctgcga gtaaagcaac agcggcgaat caggcaggcg tagccattgg
     3361 tcctgattgg tacgcaaatc gcgcgcgacg tcggtagcat tttttggagc attcactttg
     3421 atgagaattc tggcttttac tggattttgc aggttcactg caaggccgat caattgcgac
     3481 gtatcgagta attcaggcga aaagatggga tggaaaacgc gggacagatc ccgcggatcc
     3541 cgcgatatga gccgcagcgc gctctcgtga tcgagagatt ggaaacgatc gaacagctgc
     3601 ccggtgattt tcaggtccgg cttcattccc agccgcacga gtaccagctc atccacttgt
     3661 tgtggcgcgc caacggcgag cgttgccggc ccgacgcggg cgagcgcaaa atccggcttg
     3721 cgagttgtag cccctggcac gccggagcct tgcggaggcg gctcgtcgga gccggactgt
     3781 cgctcccaaa caggcaaacc gttgatcgag cgccttcgga aattcttgtc gtcggcgacg
     3841 gtccgaatca ccttggcaag tccgcgacgg ctttggacga ggttgaactc tttggtctcg
     3901 ccggtctcgt ccgtcgtgag tgcgcgggtg atgcgcgctg tatcgcgcga tggattcaat
     3961 cccggaacgg aagcggcggc gccgatcaat cccggcaaca gtctgggctt cgcatcgcgc
     4021 cagcgctttg cgaggtttgc gcgttcgaat tgatccgcgt taattgacag aatagtatcg
     4081 gtttcctgcg ggagccattc gcgtccgcgc ggcgattgga agacaacgag cgacgtgatc
     4141 gccagcagaa ccagaaccga aaatgcgctg aagtaaaact ttcgcagctc ctgcttatcg
     4201 atctggctgg agagctgggc cagctctgcc tggtgcttta actgcagatc cacggccctt
     4261 ctgcgacgat gagcctcctc cagcagatgc ggcgcattcg gcggagcaac gcccttttca
     4321 gacaaatgcc ggccgatgct caaataggcc ggattctttc gttcttcgac agtctgatgc
     4381 cgcgttcgcg cgtcgcgcgc tgcttgttgc tgggtcttaa tgctctcagc cagtttccgg
     4441 tcgcgacctt caaactcgct acgcgtgcgc gccatgtttt tttccaccgc cgcaagttcg
     4501 gagtcagcag tattcaactt ttccttcgcc attcgcaccg cgtcggtgct gcccaagcgc
     4561 gcccgcacga gttcggcgcg ttcgtccgga aggcgggccc gttttgccat gattcctgca
     4621 gacagcgctt cgaggtcggg aggcgcggga tcaagcgcgt gcagatcgga aagttgtttc
     4681 aaaagatcgc gatcggcagc ttcgctctct tgaacgcgac gctccacgcc ggccagctcc
     4741 cgttcgcaca cctcagcggt gctcctcgcc tggttgcgtt tgttaaggag cggcttcttc
     4801 tctgcttcga gtttcgcaat tgcgttcgcc tgctcacgag cgatttgctg ccgttcttct
     4861 tcaattcgtt tgatgccttc gtcaatccgc gcgatccgca gcgcgacttc tttttgttcc
     4921 tgttccagtt tctttagtgc aacgatctcg ttgcgcagct cgggaaaatt tgctgcctgc
     4981 gctgttccct cgcgtccgag attaatttcg cttctttgca gaagacgccg gtcgtgccgg
     5041 agtgccatgc gcgttttctg gcgcttgacc tttaaggcta gttcgcgaaa gcctgtgcga
     5101 aagaagctca cgggaaaacg ctatacgaag ccggagtggg aaaaagattt ttcggcttca
     5161 ttcggcccat gtgtcgtagg agcggcatca gacagatgtg gctattcctc aggtgctgcc
     5221 agctttgcca gcacgctgaa atcctccagc gtcgtcgtgt ccccggtgac ctttgcgccg
     5281 ctggcaattt ctttgaggag ccgtcgcatg attttgccgc tgcgcgtctt tggaagcgtt
     5341 tcggcaaaac gcacttcatc gggttttgca attgcgccaa tgtgcttgct gacgtgatcg
     5401 cgtagttcct ctttcagccc gcgactgacc tcaattccgc tcttcactgt cacaaatgcg
     5461 accacaccct gacccttcaa ttcatccggt ctgccgacta ccgccgcctc tgcgactcgc
     5521 gggtgactga caagcgcgct ctcgatttct gatgtgccga gtctgtggcc ggccacgttc
     5581 agaacatcat cgatgcggcc gacgatccaa aaatagccgt cttcatctcg gcgcgcgccg
     5641 tcgccggtga gataattgcc tttgaattcg ctccaatatt gctgccggta gcgcgcattg
     5701 tcgccgtaga tcgtgcgcaa catcgaaggc caaggccgtc gaataatcaa tttaccgccg
     5761 atattcgggc cgacctcctg tcccttttga tcgacgacgg cagggtcgac gccgaagaac
     5821 ggaagggtgc cgctacccgg cttggttggt gttgcccctg gaagcggagt gatcatgatc
     5881 gagccagtct cggtttgcca ccacgtatcg actatcggac aacgtccgcc gccaatggtt
     5941 ttgtggtacc acatccaggc ctccggattg atcggttcgc cgactgagcc taacaaccgc
     6001 agcgatgaga gatcgtgttt ccggacccag tcatcacccc aacggatgaa ggcgcggatc
     6061 gcggtcggag cagtgtaaag aatgttgacc cggtactctt cgatgattct ccagaaccga
     6121 tcgggctctg gccagttcgg tgcgccctca tacatgacaa ctgtggcgcc attcgcgagc
     6181 ggaccataga cgatatagct gtgaccggtg acccagccga catccgcggt gcaccaaaag
     6241 atatcctcat cgcggatatc gaagacgtat ttggtggtgc aataaacgtt caccaggtaa
     6301 ccgccggtgg tgtgcaaaat tcctttcggt ttgccggtgg agccgctggt gtaaagaagg
     6361 taaagcggat gctcgctgtc gaggggcgcg ggcggacagt ttgcatcgac gtactccagt
     6421 tctcgatgcc accaaacatc ccggccttcc tccatgtgga tgtcgtttgc cgcgcggcga
     6481 aaaacgatta cgcgccgcac cgaggtgcca tcgcggaggg cgtcatccac gtttttcttt
     6541 agcggcacaa tccctccgcg acgatacgag ccatcggcgg tgatgagcgc aatcgcaccg
     6601 ctgtcgttga ttcggtcgcg gatgctatcg gagctaaatc cgccgaacac cactgaatgc
     6661 accgcgccaa ctcgcgcg
//
LOCUS       DATDAJ010000165         3056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_968532, whole genome shotgun sequence.
ACCESSION   DATDAJ010000165 DATDAJ010000000
VERSION     DATDAJ010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_968532"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VIS53_03975"
     CDS             <1..359
                     /locus_tag="VIS53_03975"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator
                     substrate-binding protein"
                     /protein_id="HEY5766971.1"
                     /translation="SQRFLLLHEMHCLSQQVHHLLESRRLRPEIGLAGSQLTTIAHMV
                     AAGIGVSIVPHMMVKHQETPGCVSLPFAPPVPERELNFLRNPLRFQSKAAAAFHREAA
                     ALLSGDDSSPADDVKN"
     gene            complement(617..1036)
                     /locus_tag="VIS53_03980"
     CDS             complement(617..1036)
                     /locus_tag="VIS53_03980"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HEY5766972.1"
                     /translation="MKIEVRESGVHGRGVYAAQFIPKGTRIIEYTGERVAWEAAPDDR
                     DDPHTFNFGLENGEVINPEVGGNDARWINHSCDPNCETVEEDDRVFIYALRDIQPGDE
                     LLYDYHMELDEPITESAKKKFACHCGASNCRGTMIEL"
     gene            complement(1123..1830)
                     /locus_tag="VIS53_03985"
     CDS             complement(1123..1830)
                     /locus_tag="VIS53_03985"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766973.1"
                     /translation="MTAESLFRAFAQLSTPLVADAALRLKIPFRISPPGIRPITPNQR
                     LAGPALPVRHFGSVDVFLEAMQGAQPGDVLVIDNGGRLDEGCIGDLTALEAENCRLAG
                     IIVWGAHRDTSELRQIALPIFSYGMWPSGPLHLDVRDSSALDSARFGNFVVERSDVVF
                     ADDDGCLFVLAQHADNLLSVAHEIWERERRQAEAIKSGRSLREQLDFGRYLEERVADS
                     SYTFREHLRKISGAIEE"
     gene            1943..2350
                     /locus_tag="VIS53_03990"
     CDS             1943..2350
                     /locus_tag="VIS53_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766974.1"
                     /translation="MKQSITRVLGLCIIASSASANLGADSERIEDAYGTIVQRRLRDD
                     GKVSVVYAKGRYLYMVTFADSRSVLESYARANGTDLSEREITKFLKANSSAKWVPTNT
                     GAERRFKTSDGSAEATYGILNGRPALTVRALNP"
     gene            2515..>3056
                     /locus_tag="VIS53_03995"
     CDS             2515..>3056
                     /locus_tag="VIS53_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY5766975.1"
                     /translation="MAGHSKWSKVKRFKGAIDAKRGKIFSKLSKEITLAAKTGGGDPS
                     ANPRLRSAILAARAQSMPNDNVERAIKRGTGEGKDGEQLNEITYEGYAPGGVAIIVET
                     ATDNRNRTGAEVRRIFTQHSGNLASSGSVSYMFHRKGQITVPRSSIDEDRLLEIALEA
                     GAEELTIEEDQYVIITSHDQL"
BASE COUNT          712 a          848 c          841 g          655 t
ORIGIN      
        1 aatcacaacg gtttctcctc ctccacgaga tgcactgcct gtctcagcaa gtgcatcacc
       61 tgctcgagtc acgtcgtctc cgtccggaga ttgggctggc cggtagccag ctcacgacca
      121 ttgcgcacat ggtcgcggct ggcatcggcg tctcaatcgt gccgcacatg atggtgaaac
      181 atcaagagac ccctggatgc gttagcctac cgtttgctcc gccagtcccc gagcgggaac
      241 tgaattttct tcgcaacccg ctacggtttc agagcaaagc ggcggcagcc ttccatcgtg
      301 aggccgcagc tttattgtca ggcgatgatt cgtcgccagc tgacgacgtg aaaaactaag
      361 cttatctcat cgtctccaac gccgtcgcta ccatggataa catgggccaa acggcgagga
      421 tcaagatgac cccaaagagg gcgagctcag gtagataatc aggtcgcgcc ctgtgcacat
      481 atcgttcctc gaggaagcgt gagatgcgct gtcctatcgg tattctagtt tccatgcctt
      541 aaccggccac agtcggaggg cggattgaaa gactttattc gtctaggcgc gataggtttt
      601 gcctattcgc aggattttag agctcaatca ttgtgccgcg gcaatttgag gcgccgcagt
      661 ggcacgcgaa ctttttcttg gccgattcgg taatcggttc gtccagctcc atgtgataat
      721 cataaaggag ttcgtcgccc ggttggatat cgcgcagcgc atagatgaaa acacggtcgt
      781 cttcctcgac cgtttcgcag tttggatcgc aggaatgatt gatccagcgc gcgtcgttac
      841 cgccaacttc tggattgatt acctcgccgt tttccagacc gaagttgaaa gtgtgtggat
      901 cgtcacggtc gtcaggagca gcttcccagg cgacgcgttc acctgtgtat tcgatgatac
      961 gcgtgccttt tggaatgaac tgcgcagcgt aaactccgcg gccgtgcacg ccggattcgc
     1021 gaacctcgat cttcacggtc cgccgcctag ctttgttttt cttcgccatg cgcagtcgtg
     1081 gaattatttc tggttaactc ctgcttgcgg cggggattga cgctattcct caatcgcgcc
     1141 gcttatttta cgcaggtgtt cccggaacgt gtaactcgaa tcggcgacgc gctcttccag
     1201 atatcgcccg aagtccagct gttcgcgcag cgagcgcccg ctcttgatcg cctccgcctg
     1261 acgccgttct cgttcccaga tttcgtgtgc caccgaaagc aggttatcgg cgtgttgtgc
     1321 aaggacaaac aaacaaccat cgtcatccgc aaaaaccaca tcactgcgtt cgacgacaaa
     1381 attcccgaag cgtgccgagt ccaaagccga ggaatcgcga acgtcaaggt gcagtgggcc
     1441 cgacggccac atcccgtaac tgaaaattgg cagagcaatc tgccgcagct ctgaagtgtc
     1501 gcgatgcgcg ccccacacaa tgattccagc gagacggcag ttttcagctt caagcgcggt
     1561 tagatcgccg atgcagcctt cgtcgagacg gccgccatta tcgatcacca gaacatcgcc
     1621 gggttgcgcg ccttgcattg cttccagaaa aacgtcgacg cttccaaaat gtctgaccgg
     1681 cagcgccggg ccagcgagac gttgattcgg cgttatcggc cgaatgccag gcggactgat
     1741 tcggaaggga atcttcaacc gtagagcagc atccgcgacc agcggagtag aaagctgcgc
     1801 aaaagcgcga aataatgatt ccgctgtcat gctgcgatca tgcgccgttt ggccgggttt
     1861 gcaaaaggaa cagacatttc gaaacttagg attcaaagag cagtccggtt gcggatttct
     1921 gccagatgtt agaatggaac gtatgaagca gtcgatcaca cgggttctcg gcttgtgcat
     1981 aatcgcaagc tctgcatccg caaatctcgg tgccgacagt gaaagaattg aagatgcgta
     2041 tggcacgatc gttcaacgac gcctgcgaga cgacgggaag gtaagtgttg tctacgctaa
     2101 aggtcggtat ctctacatgg tcacgtttgc tgacagccgg agcgttttgg aaagctacgc
     2161 ccgcgcaaac ggcaccgatc tttccgaaag ggaaattacg aagttcctga aggcaaactc
     2221 ttctgccaaa tgggtgccaa ccaacaccgg cgcggagcgg cgttttaaaa cgagtgacgg
     2281 aagcgcagag gcgacatacg gcattctaaa cggtcggccg gcattgacag tgcgcgcgct
     2341 taacccctga ccgtctctgc tagtgtcggc ggcggttcct tgtgagaggc gattgacgaa
     2401 ataagtttcc atgcgattaa ttggcgcggt aaatttctcc ccctcgcaag tcatttctct
     2461 cgcgaggtga acacaactcg caagttttca ggttgaaaat aactccgcac acctatggcg
     2521 ggacatagta agtggtcgaa ggtcaaacgc tttaagggcg caattgacgc caaacgcggc
     2581 aagatcttca gcaaattatc caaggaaatc acgctcgcgg caaagaccgg cggcggcgat
     2641 ccgagtgcca atccccgtct gcgcagtgcg atcctggcgg cacgcgccca gagcatgccc
     2701 aatgacaatg tcgaacgcgc gatcaaacgc ggcacgggag agggcaagga cggcgaacag
     2761 ctgaacgaaa ttacttacga aggttatgcg cccggcggcg tggccatcat cgtagagacc
     2821 gcgacagaca atagaaaccg cacgggagcg gaagtacgca gaattttcac gcaacatagc
     2881 ggcaacctcg cctcgagtgg cagcgtctcg tacatgttcc accggaaagg acagatcacg
     2941 gttccgcgct ccagcatcga cgaggatcga ctgctcgaaa ttgctttgga agctggcgcg
     3001 gaggagttga caatcgagga agatcaatat gttatcatca cttcccacga tcagct
//
LOCUS       DATDAJ010000166         2311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_981370, whole genome shotgun sequence.
ACCESSION   DATDAJ010000166 DATDAJ010000000
VERSION     DATDAJ010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_981370"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1067
                     /locus_tag="VIS53_04000"
     CDS             <1..1067
                     /locus_tag="VIS53_04000"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY5766976.1"
                     /translation="CFLIGEFGQQLHLSREMGALVAGVALSTFPYALDVTAKVISLRD
                     FFVTLFFVAIGMQIPLPTGSLIGWVLAFAAFVVITRTATVFTPLYFMRQGLRTSIIPA
                     LNLCQVSEFSLVVLAIGAQAAHLASPATRGIVALAFTLLAVVSTFGMAKSDNLARALI
                     PWLKKFGFRDLDHVPADAHTVGAAAHGHGARIIFVGFFRTASSLLEELQRHDPELVAE
                     VAVVDFSPVARDGLLKRDVPVIYGDVSHRDTLVHAGVDKAEVLVSTVPDSLLKGTTNA
                     RLVRLLRELNPTAKIIGTCDVLAQARELLDAGADYVNVPRLHQAGDLLQAVRAAREGL
                     LDEKRAALREILLDRCEVLA"
     gene            complement(1281..1541)
                     /locus_tag="VIS53_04005"
     CDS             complement(1281..1541)
                     /locus_tag="VIS53_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766977.1"
                     /translation="MIANPHKVGLVIAVLIGGWHVAWSLLVLIGWAQPILDFIFWAHM
                     IKPVYIVKPFDPTAAVALIAITSVIGYVFGFLGAVIWNRLHR"
     gene            complement(1670..>2311)
                     /locus_tag="VIS53_04010"
     CDS             complement(1670..>2311)
                     /locus_tag="VIS53_04010"
                     /inference="COORDINATES: protein motif:HMM:NF021619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY5766978.1"
                     /translation="CPFGLTETAVPVNLGAKIIGYLRIGSVLRHTPVKADTSKVSREL
                     ERCGVRFTGQIRKAWEKTPLIPPDKYNATVRLLTFFAEQLSALANQIVLEQSNSEPPL
                     VLKAREYIEKHKNEELSLADAAKVAGASVFHFCKVFHKSTGLKFTDYVARVRLEDART
                     RLLNPNLRISEIAYDVGFQSLTQFNRTFKRVFGQSPTEFRARVSSGRRAGKTT"
BASE COUNT          466 a          634 c          653 g          558 t
ORIGIN      
        1 ggtgttttct cattggcgag ttcggacagc agctgcatct ctcccgtgag atgggcgcgc
       61 tagtggcggg ggtggcgctc tccaccttcc cgtatgcgct cgatgtgacc gccaaggtga
      121 tcagtctgcg cgatttcttt gtgaccctgt ttttcgtcgc gatcgggatg caaattccgt
      181 tgccgactgg cagtctcata gggtgggtac tagcgtttgc tgcgtttgtt gtcataactc
      241 gaacggcaac tgtttttacg ccgctttatt ttatgcgtca gggcttgcgg acaagcatta
      301 tcccggcgtt gaatctttgc caggtcagcg aattctcgct tgtggttctc gccattggcg
      361 ctcaggcagc tcacctagcc agcccggcca cccgcggcat cgttgcgctc gcattcactc
      421 tgcttgcggt tgtttccacc ttcggcatgg cgaaatccga taatctggcg cgggcgctca
      481 ttccgtggtt gaagaagttt ggtttccgtg atctcgacca tgtgccagcc gatgcccaca
      541 cagtcggcgc cgctgcccac ggccacggcg cccgcattat ctttgttggc tttttccgga
      601 ctgccagttc gctgctggaa gagctccaac ggcacgatcc cgagttagtt gccgaagtcg
      661 cggtggtgga cttcagtccg gtcgcacgag atggccttct caagcgagac gtgcccgtta
      721 tctatggtga tgtttcgcac cgggacacac ttgttcatgc cggagtggat aaagccgagg
      781 tgcttgtctc cactgttcca gattcactgc tcaaaggtac aacaaacgcg cggctcgtcc
      841 gtcttctgcg cgaactgaac ccgactgcaa aaatcattgg tacttgcgac gtgcttgcgc
      901 aagcaaggga gcttctcgat gcaggcgctg attacgtcaa cgttccgcgt cttcaccagg
      961 ctggtgatct gctgcaagcc gtgcgcgccg ccagggaggg gctgcttgat gaaaagcgcg
     1021 cggctctgcg cgaaatcctg ctcgatcgct gcgaagtgct cgcgtgaacg cgagccaggg
     1081 acaattttgt gatcttgccg cacagccgcg aaacggtcac ggcggtcgag catttgttca
     1141 ggattcgtgt tttgtcgtgc catgaattgg cgatctccga ctgatggttc cgggcggtga
     1201 agcgcgagac attccattcc aggaacgcgc ggcgctaaat attttctggt cgcaaattag
     1261 ctgacgagga cgctaatttg ctagcggtgc agccggttcc agatcaccgc gccgagaaaa
     1321 ccaaagacat agccgatgac actggtgatc gcgatgagcg caacggccgc cgttggatcg
     1381 aatggcttga cgatgtacac cggcttgatc atatgcgccc agaaaatgaa atcgagaatc
     1441 ggttgcgccc agccgatcag aacaagaagc gaccaagcta catgccagcc gccgatcagc
     1501 acggcgatca ctaacccaac cttgtgggga ttagctatca tctcacaatg tcattctgag
     1561 cgcggcgaag aatctcgaat caaatcttta tcgatctacc aaaatagacc gagatgtttc
     1621 gcttcgctcc ctcgtacagt gagttccagc tatcgttact ttttctcaac taggtggtct
     1681 taccggcgcg tctaccagaa gaaacccgcg cccggaattc ggtgggtgat tgaccaaaaa
     1741 cgcgtttgaa cgtgcggttg aattgcgtga gcgattgaaa gccgacgtcg tacgcgatct
     1801 cgctgatgcg gagattcggg ttgagcaacc gggtgcgcgc gtcttccagg cgcacacgcg
     1861 cgacgtagtc ggtaaatttc aatcccgtgg atttgtggaa gactttgcaa aaatggaaaa
     1921 cgctcgcgcc cgcaaccttt gccgcatcgg ccagagacaa ttcttcgttt ttgtgcttct
     1981 cgatgtactc gcgcgctttg agaacaagag gcggttctga attgctctgc tccaagacga
     2041 tttgattagc cagtgcggaa agttgttcgg cgaaaaatgt gagcagtcgc acagtcgcat
     2101 tgtatttgtc cggtggaatg agcggagttt tctcccatgc tttgcgaatc tggcccgtga
     2161 atcgcactcc gcaccgctcc agttcgcggc tgaccttcga ggtgtccgct ttcaccggag
     2221 tgtgacgcaa caccgagccg atacgcaggt atccgatgat cttggcccca aggttcactg
     2281 gaactgctgt ttcggttaac ccgaagggac a
//
LOCUS       DATDAJ010000167         7191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_984764, whole genome shotgun sequence.
ACCESSION   DATDAJ010000167 DATDAJ010000000
VERSION     DATDAJ010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7191
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_984764"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VIS53_04015"
     CDS             <1..205
                     /locus_tag="VIS53_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766979.1"
                     /translation="YIQDKGPKNEGRDMGQPGKELYFDNGKLIKFEDRSGESSVDADQ
                     EKKMYEARLPQEISELLDILKKK"
     gene            388..936
                     /locus_tag="VIS53_04020"
     CDS             388..936
                     /locus_tag="VIS53_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEY5766980.1"
                     /translation="MHIQPDSLPTGHDGIVPRLQKGPTIHSSAWVVPGATVLGDVILE
                     EESSVWYGAVLRGDINRIIIGPRSNVQDNAVVHIDTGYPTTVGELVTIGHTAIVHACK
                     IDNEVLIGMGSIILDDVEVGARSIIGANALVTMGMKIPPGSLVLGSPAKIRRQLTLEE
                     QNDIARWAWSYVDTAKQYREFY"
     gene            976..1464
                     /locus_tag="VIS53_04025"
     CDS             976..1464
                     /locus_tag="VIS53_04025"
                     /inference="COORDINATES: protein motif:HMM:NF025852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5766981.1"
                     /translation="MKTVLRFVVVVLFSVFFDHAPLAAADTQPADMRLYAAETIEWKL
                     GPAALPPGAKMAVLEGDPTKEGPFVVRFQFPEGYYIAPHTHPKTERVTVISGALYLAT
                     GEALDRNSAKKLPAGSFGYWPAGMKHAGWSEGDTVIQLHGVGPWQINYVNPADDPRNA
                     KK"
     gene            complement(1500..2633)
                     /locus_tag="VIS53_04030"
     CDS             complement(1500..2633)
                     /locus_tag="VIS53_04030"
                     /EC_number="2.7.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR00045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEY5766982.1"
                     /translation="MRILIAPDKFKGTLNAREVAQNIAKGLLGVLPDAQIEVVPMADG
                     GEGTADAVCDARGCSWLECKAHDPLGREIDARYGWIDQEKLAVMEMSEAAGMRRLSES
                     ERDPIRATTFGVGEMILDATNRGACEIILGLGGSATNDGGFGMARALGFRFELEKEHE
                     HEHEQEQVRVTDLLELKRIVKPSRIEWPKVIAAVDVKNRLLGENGATRVFGPQKGVSK
                     SDLENLEHALTRLADVVATEFGFDYRNQAGAGAAGGLGFGLLSFCDATIRPGFEVVAE
                     AVGLEPKMKNADVVITGEGSLDRQTLEGKTPVGVARLARKLGKPVFAIVGRASEDREV
                     REIFDGIYQNARPGMRQQENMKRAAELLRENARELAETFGAGL"
     gene            complement(2765..4219)
                     /gene="gatB"
                     /locus_tag="VIS53_04035"
     CDS             complement(2765..4219)
                     /gene="gatB"
                     /locus_tag="VIS53_04035"
                     /inference="COORDINATES: protein motif:HMM:NF004012.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEY5766983.1"
                     /translation="MNYIATIGLEVHVQLKTRSKMFCASPVEFGAEPNTHTCPVCLGL
                     PGALPVMNQEALRMTVLTGLMLGCDIAPVSKFDRKNYFYPDMPKNYQISQYDMPLCTN
                     GSVPLHDLAYPKHAQKNIVTHDKEVHLVRIHLEEDVAKSFHFENSTGIDFNRAGTPLM
                     EIVTQPEINSPEEAFAFLSALKQILIYGAVSDADMEKGQLRCDCNVSIRPEHQTELGA
                     KIELKNLNSISGVRRALAYEIRRQTSILERGEHFEQETRGWDDTAGETFLMRTKEFAH
                     DYRYFPDPDLVSVKTDALVADVRKRVPELPKAKRARFVEQYQVSPYDAAVLANDLELA
                     RYFEAAAKGAKKPKNVVNWILNDLQNALGAAGKGINECPIPPEALDEFVNLIDSGKIS
                     GKQGKEVFAEMFGTGKSAAAIVEEKGVEQLSDISAIETLCDEVIAANPKPVADFRAGN
                     VTSLNFLKGQVIKLSKGKANPQLVGEILERKLKV"
     gene            complement(4410..5519)
                     /gene="aroC"
                     /locus_tag="VIS53_04040"
     CDS             complement(4410..5519)
                     /gene="aroC"
                     /locus_tag="VIS53_04040"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEY5766984.1"
                     /translation="MGNSFGQLFRVTTFGESHGGGIGVVIDGCPPRIEISEAEIQRDL
                     DRRRPGQSKLTTQRKEEDRCELLSGVFEGRTLGTPIAILVRNKDARPEDYSEIARKFR
                     PSHADYTYEAKYGIRNWQGGGRASARETIGRVAAGAIAKETLSALYADFELVAYVMQI
                     HEVTAKIDRSTVTMNDVEKNVVRCPDAAAAKKMISLVEQIRDAGDSVGGVIECVARGI
                     PPGLGEPVFDKLEADLAKAILSIPAAKGFEIGSGFAATRMRGSQHNDAFETRAGRIRT
                     TTNNSGGVQGGISNGEDIYFRVAFKPPATIALEQKTVTTLNEETELAARGRHDPCVLP
                     RAVPIVEAMAALVLCDHALRQRAIAIADRGLRIAD"
     gene            complement(5612..6772)
                     /locus_tag="VIS53_04045"
     CDS             complement(5612..6772)
                     /locus_tag="VIS53_04045"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HEY5766985.1"
                     /translation="MKKEQGFATRAIHAGQQPDPTTGAVMTPIYATSTYVQESPGTHK
                     GYDYARSINPTRLAYEKCIADLESGSRGFAFASGLSAMATVLEVLDSGSHIVASDDLY
                     GGTFRLFDRVRRRSANLDFTYVDLTDAKDLERAIKPNTRMVWIETPSNPLLKLIDLDA
                     IAKIARKRKLISVSDNTFATPWIQRPIESGFDIVVHSATKYLNGHSDLVGGVAVVGKN
                     KELADQIAFLQNSVGAIAGAFDSFLVLRSLKTLALRLERHCSNALEIARWLEDQREIK
                     SVHYPGLKSHPQHDLARQQMRGFGGMVTIVLKTDLAGTRRFLENTHLFALAESLGGVE
                     SLINHPALMTHASVPEEQRQKLGITDSLVRLSVGVEDVRDLIDDLKSALEAI"
     gene            complement(6841..>7191)
                     /locus_tag="VIS53_04050"
     CDS             complement(6841..>7191)
                     /locus_tag="VIS53_04050"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5766986.1"
                     /translation="LLTAFKRMRDSDVSQLPVVDKSGRAIGLIDESDLLVKVHREPSH
                     FNDPVSKAMTDQLETLPPDAKITDLLGVFDRGRVAIVMDGNKFLGLITRTDWLSYLRL
                     HMPKSSAPPEREFV"
BASE COUNT         1543 a         2101 c         1882 g         1665 t
ORIGIN      
        1 ctacatccaa gacaagggtc caaaaaacga gggaagggac atgggacaac ccggcaaaga
       61 actctatttc gacaacggca agctgatcaa attcgaagac cgtagcggag agtcgagcgt
      121 cgatgctgat caggagaaga agatgtacga agctcggcta ccccaggaaa tctccgagtt
      181 gctcgacatc ctgaagaaga aatagcaaac tgcaggttca cggttacgcc gggcacattg
      241 tgctgctgcg aaataccgga ggttgaatcc aggcgaacgg gactcttcgc tgctgttgaa
      301 tacatgttgc cattcggcga tggatgcttg ccacgctgca gccttgcgga ggcgtgttga
      361 gcgttcaatg ttgaacgtaa ctgccgaatg catattcaac cagattcact gccgaccgga
      421 cacgacggca tcgtcccgcg actgcaaaaa ggccccacca tccattcgag cgcatgggtt
      481 gttcctggcg cgactgtgct gggcgacgta attctcgaag aagaatcaag cgtctggtac
      541 ggcgcggttt tgcgcggtga tatcaatcgc atcatcatcg gaccgcgctc gaacgttcag
      601 gacaacgctg tcgtccacat tgacacgggc tatccaacaa ccgtaggcga actggtcact
      661 atcgggcaca ccgcgattgt tcacgcgtgc aagatcgaca atgaagtgct catcggcatg
      721 ggatccatca ttctcgacga cgtcgaagtt ggcgcgcgtt ccatcatcgg cgcaaacgcg
      781 ctcgtgacga tgggaatgaa aatcccgccc ggctcactgg tgctcggctc gccggcaaaa
      841 attcgcagac aactgacgtt ggaagaacaa aacgacatcg cccgatgggc atggagctat
      901 gtcgacacag cgaagcagta ccgcgaattt tattgaacga cttgcctcaa caaattcaga
      961 aacaataatc agcgcatgaa aactgttctt cgcttcgtag tagttgttct cttctccgtt
     1021 ttcttcgatc acgcaccgtt agccgccgca gacacgcaac ccgcggacat gcgcctttac
     1081 gctgctgaaa ccattgaatg gaaactggga ccagccgcct tgcctcctgg cgcaaagatg
     1141 gctgtgctcg aaggcgatcc aacgaaagaa ggaccgttcg tagtgcgctt ccagttccct
     1201 gaaggctatt atatcgcacc gcatacccat ccaaaaactg agcgcgtcac ggtaatttcg
     1261 ggtgctcttt atctcgccac gggagaagcg cttgatcgca atagcgcgaa aaaacttccg
     1321 gcaggatcct tcggttactg gcccgctgga atgaaacacg caggctggtc cgaaggcgat
     1381 acggtaattc aacttcacgg cgtcggtccg tggcagatta attatgtcaa tcccgcggac
     1441 gatccgcgga acgccaagaa atgacgcatt gaggcggcgc ttcacggcaa cagtcgccgt
     1501 tacaggccag cgccaaatgt ctctgccaac tcgcgtgcgt tctcgcgcaa aagttcggct
     1561 gcgcgtttca tattttcttg ctgcctcatt cccggacgcg cgttttggta aataccgtcg
     1621 aaaatttcgc gaacttctcg atcttcagat gcacgcccaa caattgcgaa cactggcttt
     1681 ccgagctttc gcgccaaccg cgccacgccg actggcgtct tcccttcgag cgtctgccga
     1741 tccagactcc cctcgcctgt aatcaccacg tccgcatttt tcattttcgg ttcaagcccg
     1801 accgcttcag cgacaacttc gaatcccggc cggattgtcg cgtcgcaaaa gctcagcaaa
     1861 ccgaagccga ggccgcctgc ggcgcccgca cccgcttggt tccgatagtc gaatccgaat
     1921 tccgtggcca cgacgtccgc gagccgcgta agcgcgtgtt ctaaattctc gaggtcgctt
     1981 ttgctcaccc ctttctgtgg accaaacact cgtgtcgcgc cattttctcc gagcaaccga
     2041 ttcttcacat cgaccgccgc gataactttt ggccattcga tacggctcgg tttcacgatt
     2101 cttttaagct caagtaaatc cgtgacgcgc acctgctctt gctcatgctc gtgctcgtgc
     2161 tctttctcga gctcgaaccg aaatcctaac gcacgtgcca tgccgaaacc gccatcgttt
     2221 gtggcgctcc caccaaggcc gagaatgatt tcgcacgcac cgcggttggt cgcatccaaa
     2281 atcatttcgc ccacaccgaa cgtagtcgcg cgaattggat cgcgttcact ttcggaaagt
     2341 cgccgcatac cagcagcttc gctcatctcc attaccgcaa gtttttcctg gtcgatccat
     2401 ccgtagcgcg cgtcgatctc gcggccgagc ggatcgtgcg ccttgcattc aagccaggag
     2461 cagccgcgcg catcacacac tgcgtccgcg gtcccctccc cgccgtcggc cattggcacc
     2521 acttcgattt gcgcgtccgg cagcacaccg agcagccctt tcgcgatgtt ttgcgcgact
     2581 tcccgcgcgt ttagcgtgcc cttgaactta tccggggcga ttaaaatgcg cacaggttga
     2641 atttcatcgg tcggcttcct gttgtcatcc tgagcgaagc ggcagcgaag tcgaaggatc
     2701 ccgtcgcgtt acccaacatt gcgtcgcggg gttcctcgac ttcgctcgga atgacagact
     2761 gcggctatac ttttagtttt cgttcgagaa tttctccaac cagctgcgga ttagctttgc
     2821 ctttagatag cttaatcact tgtcccttga gaaagttcaa tgatgtaacg ttgcctgctc
     2881 gaaaatccgc taccggtttc gggttcgccg cgatcacttc atcacacagc gtttcaatcg
     2941 cgcttatgtc gctcagttgc tcgacgcctt tttcttccac aatggcggct gcgctctttc
     3001 cggtcccaaa catttccgca aaaacttcct tgccctgctt gccgctgatt tttccgctgt
     3061 cgatcaagtt tacgaattca tcaagtgcct ccggcggaat tggacactcg ttgatccctt
     3121 tgccagcggc gccgagcgcg ttctgcaaat cgttcaagat ccagttgact acgttcttag
     3181 gctttttcgc gcctttggca gccgcctcga aatatctcgc taactccaga tcgttcgcca
     3241 gcacggcggc atcgtatgga ctcacctggt actgctcgac gaagcgcgcg cgcttcgcct
     3301 ttggcaactc cggcacgcgt ttccgcacat cggccaccag ggcatccgtt ttcaccgaga
     3361 caagatctgg atcaggaaaa taacgatagt cgtgcgcgaa ttccttggtc cgcatgagaa
     3421 atgtttcacc tgcggtatcg tcccaaccgc gcgtctcttg ctcaaaatgt tcaccgcgct
     3481 ccagaatgct ggtttgacgg cgaatctcgt aagcgagagc acgccggaca ccgctgatgg
     3541 agttcaaatt cttgagttcg atttttgctc cgagttcggt ttgatgttca gggcgtatgg
     3601 aaacgttgca atcgcagcgg agttgtccct tctccatatc agcatcgctc accgcgccgt
     3661 agatcaggat ttgtttcaac gcgcttaaaa acgcgaacgc ttcctcgggc gaattgattt
     3721 ccggctgggt cacgatttcc atcaacggcg tgcccgcgcg attgaaatca atcccggtgc
     3781 tattctcgaa atggaaactc tttgctacgt cttcctcgag atggattcgt acgaggtgta
     3841 cttccttgtc atgcgtgacg atgtttttct gtgcgtgttt gggataagcg agatcatgca
     3901 acggcacgct gccgttcgtg cacagcggca tgtcgtactg cgagatctga taatttttcg
     3961 gcatgtccgg gtagaaataa tttttgcgat caaacttgct gaccggcgcg atatcgcatc
     4021 cgagcatcag tcccgtcagc acggtcatgc gcaacgcttc ctgattcatc accggcaacg
     4081 cgccgggcaa cccgaggcaa accggacagg tatgcgtgtt cggctcggcg ccaaattcaa
     4141 ccggcgaagc gcaaaacatt ttggatcggg tcttaagctg cacgtgcact tccaacccga
     4201 tcgtggcgat gtagttcatg cttgcgcaat attggttgaa gcgttgaagc gttaaaacgt
     4261 taaaacgtta aaacggctgt cattctgagc gaagcgaaga atctctgatt atttctgtcg
     4321 actcaagtag cagagaaaca tagccagaga tgtttcgctc cgctcaatat gacaccgaaa
     4381 gcggatgttg cgtcggagtt ccaagctgat caatccgcaa tccgcagtcc gcgatcggca
     4441 attgcgatcg cccgttgccg caacgcgtga tcgcaaagaa cgagcgcggc cattgcttcg
     4501 acaatcggca cggctcgtgg aagaacacac ggatcatggc gtccgcgggc ggccagctca
     4561 gtctcctcgt ttaaagtggt gacggttttc tgctcgagcg caatcgttgc aggcggctta
     4621 aacgcaacgc gaaagtaaat gtcttcgcca ttgctaatgc caccctgcac gccgccggag
     4681 ttgttcgtgg ttgtccgaat tcttccagcg cgggtttcga atgcatcgtt gtgctgcgag
     4741 ccccgcatcc tcgtcgccgc aaatccagag ccgatctcaa aacctttcgc cgctggtatg
     4801 ctcagtattg ctttcgccag gtctgcttcg agcttgtcga atacgggctc gccaagtccg
     4861 ggcgggatgc cccgcgcgac acactcgatc acgccaccga cggagtcgcc tgcgtcccga
     4921 atctgctcga ccagcgagat catctttttc gcagcggcag catccgggca gcggacaaca
     4981 tttttctcaa cgtcgttcat tgtcacggtg gaacggtcaa tcttcgcggt cacttcatgg
     5041 atttgcatca cgtaggcgac gagttcgaaa tccgcataca aagcggacaa tgtttctttt
     5101 gcaatcgcac ccgccgcgac gcggccaatc gtttcacgcg cagacgcgcg accgccgccc
     5161 tgccagtttc gtattccgta tttggcctcg taagtgtaat ccgcatgcga tggccgaaat
     5221 ttgcgcgcga tttcgctgta atcttcgggt cgagcgtcct tgttccgaac aagaatcgcg
     5281 atcggcgtcc cgagcgttct gccttcaaaa acgccggaca gaagttcgca gcggtcttcc
     5341 tccttccgct gcgtagtgag tttgctttga cccgggcgcc gacgatccag atctcgttga
     5401 atttccgctt cggaaatttc gatacgtggc gggcaaccat cgatcaccac gccgatgccg
     5461 cctccatggg actcgccaaa tgtggtgacg cggaacaatt ggccaaatga gttgcccatc
     5521 agcgggtaca gtagcacagc cgtctcggct gtgggcaggc gggcgtctcg cctgcggtca
     5581 ctctggctca gcaggcgaga tgcctgtgct attaaatcgc ttccagcgcg ctcttcagat
     5641 catcgattaa gtcgcggacg tcctcgacgc cgacagacag ccggacgagc gaatcggtga
     5701 tgccgagttt ttgccgttgt tcttccggca cggaggcatg cgtcatgagc gcaggatgat
     5761 tgatcaggct ttccacgcct cccaggcttt ccgccaaagc aaacaagtgc gtgttctcaa
     5821 gaaaacgccg cgttccagcg aggtcagttt tcaaaacaat ggtgaccatt ccgccgaacc
     5881 cgcgcatctg ttgccgcgct agatcgtgtt gtggatgcga tttcagtccg ggataatgga
     5941 ccgatttgat ttcgcgctgg tcctcaagcc agcgcgcaat ctccagcgcg tttgagcaat
     6001 gccgttccaa gcgaagcgcc agcgttttca aactgcgcag aacgagaaaa ctatcgaagg
     6061 cgccggcaat ggcgcccacc gaattttgca aaaacgcaat ttgatcagcg agttccttgt
     6121 ttttcccaac aacggccacg ccgcccacca gatcggaatg cccgttcaaa tatttcgtgg
     6181 cggaatgcac aacgatatcg aaccccgatt caatcggtcg ctgaatccat ggagtagcga
     6241 aggtattatc gctaaccgaa atcaatttcc gtttgcgcgc gatcttcgca atcgcgtcaa
     6301 gatcgatcag cttgagcagc ggattactcg gggtctcgat ccaaaccatg cgtgtgtttg
     6361 gtttgattgc ccgctcgaga tctttcgcat cggtcaaatc gacataggta aaatcaagat
     6421 tagcggagcg acggcgcacc cggtcgaata acctgaaagt gccgccgtac aagtcgtcgc
     6481 tcgcgacaat atgcgagccg ctatctagta cctccagcac tgtcgccatc gcagacaaac
     6541 cggatgcgaa cgcgaacccg cgcgatccgc tttccaaatc ggcgatgcat ttttcgtatg
     6601 ccagccgggt gggattgatt gagcgcgcgt aatcgtagcc tttgtgtgtc ccggggcttt
     6661 cctgcacgta cgtcgacgtg gcgtaaatcg gtgtcatcac tgcgccagtg gtgggatccg
     6721 gctgctgccc ggcgtgaatg gcgcgcgtcg cgaagccctg ttcttttttc atgcgatatg
     6781 gtagcgcatg gctctggctt gcgctccaaa attactcgca agcgggacgc gtgcgctacg
     6841 ttagacaaac tcgcgttccg gcggcgcgga cgatttcggc atgtgaagcc ggagatacga
     6901 aagccaatcg gtgcgcgtaa tcagcccaag aaatttgttg ccgtccatca cgatagcgac
     6961 tcggccgcga tcgaatacgc caagcaagtc tgtgattttg gcgtccggcg gcagcgtttc
     7021 caactggtcc gtcatggcct tgctcacagg atcgttaaaa tgcgatggct cacggtgcac
     7081 ttttaccagg agatccgatt catcgatgag cccgatggcg cggccgctct tgtcgaccac
     7141 cggaagctgc gacacatctg agtcgcgcat tcgtttgaac gctgtgagta a
//
LOCUS       DATDAJ010000168         3820 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_985691, whole genome shotgun sequence.
ACCESSION   DATDAJ010000168 DATDAJ010000000
VERSION     DATDAJ010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3820
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985691"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1167)
                     /gene="maeA"
                     /locus_tag="VIS53_04055"
     CDS             complement(<1..1167)
                     /gene="maeA"
                     /locus_tag="VIS53_04055"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF010052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate-decarboxylating malate
                     dehydrogenase"
                     /protein_id="HEY5766987.1"
                     /translation="MPEPIAQRVAETVPPRIPRGMDLLDTPLLNKGTAFTEEERTVFG
                     LLGLLPPHVETLQEQVVRAYEAYQRKDDDLERHIYLRALQDTNEVLFYRLLLDHIEEM
                     TPIVYTPTVALACQQFSHIYRRPRGLFVSYPRRDSIITLLRNRPNPNVDVIVVTDGER
                     ILGIGDQGAGGLGIPIGKLSLYTLIGGIRPERTLPIVLDIGTNNRERLDDPEYLGWRH
                     ERITGQDYFDFIDQFVQAVKKEFPETCLQWEDFANSHARPILERYRDNLLTFNDDIQG
                     TAAVALGAILSAIKVTGKALGEQQIVMFGAGSAAIGVADGLRAAMKEEGLSEQEARSR
                     FWLLNSKGLLHSGRKDLSPEQNVYAQPESRISGWPRSSNGRIGLADVIGKIDATI"
     gene            complement(1380..1622)
                     /locus_tag="VIS53_04060"
     CDS             complement(1380..1622)
                     /locus_tag="VIS53_04060"
                     /inference="COORDINATES: protein motif:HMM:NF045445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766988.1"
                     /translation="MNIEFTRSFLLWCTVINYGILLVWFLVFAIAHDWMRRFHGRWFR
                     LSDEQFDFLHYLGMSIYKIGILLFNLVPLIALLIVG"
     gene            1824..2171
                     /locus_tag="VIS53_04065"
     CDS             1824..2171
                     /locus_tag="VIS53_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766989.1"
                     /translation="MSLQTIAARFTDKPVKLDGAQERRVLTTLKMIYEGGSLDGKTAT
                     FATRDLSCVVVGRHRGNWHFFETYNRTIWINLRNGRTIFRCAGHTVKSSKSSWWKELL
                     AVLRIRKLKAIVI"
     gene            2283..3776
                     /locus_tag="VIS53_04070"
     CDS             2283..3776
                     /locus_tag="VIS53_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766990.1"
                     /translation="MQIHTNKSASAMNAVELRQCYYQHADVRVRICEFIGATTVHKSS
                     CEFLAASDENAAAPFKPYPPRALNSLLAGGFEISRSLWDHDALIADFDIEYVNFDNPA
                     EAFVDPERVFAIQQPVVETIEQLLREYGIDALHVLSGRGHHFVWRIAQNSALFKQLAE
                     IGRGPPSLWECETEVHPPNAHPVPTQLARAFAGLGLVMEFLAHRVKQIAAPQTEIPVE
                     LTAVEVGPSKHAREMISIDISEYGDPLFSRAVRVPFSVYLKPWQQSWDFDVDVLANLQ
                     SLFVIPLQGIDWRQGVATMRDARLTVKLAGRASSKIPDATPGTAKLLRAYEQSKLAKF
                     HADFYSQEQHPPKRWPETYDRQRLDILPACARIALEQPNDLLLRPAFIRRLVRVMLAL
                     GWHPRHIAGLICSKYRRDFGWTQFVNVDPATRADFYTRVFAGLFAAGTDDLVDFNCAS
                     AQEQGTCTFSNCGFNLLNFKESALERRKHDKLAHRPFNRLLLSSEHS"
BASE COUNT          874 a         1044 c         1011 g          891 t
ORIGIN      
        1 aattgttgcg tcgatctttc caatcacgtc ggcaagaccg atgcgtccat tggagcttcg
       61 aggccagcca gaaatgcgac tctctggttg agcataaaca ttctgctccg gactaaggtc
      121 ttttcggcct gaatgcagca ggcctttgct gttaagaagc cagaagcggc tgcgcgcctc
      181 ctgttcgctc agtccttcct ctttcattgc cgcacgcaat ccatcggcaa caccgatcgc
      241 cgctgaacct gcgccgaaca tgacgatctg ttgttccccc aaagcctttc cggtcacttt
      301 gatggcgctc aaaatcgcgc cgagtgcaac ggcggctgtt ccctggatat cgtcgttaaa
      361 ggtcagcaag ttgtcgcgat aacgctcgag aataggccgg gcatgcgaat tcgcgaaatc
      421 ttcccactgc aggcatgttt ccggaaactc cttttttacc gcctgcacga actgatcgat
      481 aaagtcgaaa taatcctggc cagtgattcg ttcgtgacgc cagccgaggt actcaggatc
      541 gtcgagccgt tcccgattgt tagttcctat gtccagcacg atcggtaggg ttcgttccgg
      601 acgaatccca cctatgagcg tgtaaaggga aagcttaccg attgggatgc ccaggccgcc
      661 tgctccctga tcacctattc ccaggattcg ctcaccgtcg gttacaacaa tgacatccac
      721 gttcggattc gggcgatttc gcaaaagtgt aatgatggag tcgcggcgcg gataagaaac
      781 aaagaggccg cgcggtcggc gatagatgtg actgaattgc tggcaggcta gcgccactgt
      841 tggcgtgtaa acaattggtg tcatctcctc gatgtggtcg agaagaagcc tgtaaaagag
      901 cacttcgttt gtgtcctgca gagcccgcag gtagatgtgc cgctcgaggt cgtcgtcctt
      961 tctctggtaa gcttcgtaag cacgcaccac ttgctcttgc agtgtttcta cgtgcggcgg
     1021 cagaaggccg agcagcccaa atacggtgcg ctcttcctcg gtgaaagcgg tgcctttgtt
     1081 cagtaatggt gtatcgagca gatccatccc gcgaggaatc cgcggcggga cggtttccgc
     1141 gactcgttgt gcgatcggct ctggcatatt ttactctgct tctgactgag gattctccga
     1201 ctcgttagcg gaaaaggcga ggtcatgcga atagaatcgg tactcatcga actcgcccgc
     1261 ttgcccgtaa tgtgtttcga tcaccttgga tgaaagttgt acatccaaag aggcagcgct
     1321 tcttctatca gctgtgatta gccgcatgtt aggcatgcgt cttcaagagc gacccatctt
     1381 cagccgacga tcaatagagc aatcaaaggc accaggttga acagaagaat tccgatctta
     1441 taaatcgaca tcccgagata gtgaagaaag tcgaactgct catcggatag acgaaaccat
     1501 cggccgtgga agcggcgcat ccagtcatgt gcgatcgcaa agaccagaaa ccacaccaac
     1561 aggattccgt agttgatgac tgtgcaccac agaagaaagc tgcgcgtaaa ttcaatattc
     1621 atcttcttca ctcctcctcg gcatcttacg agaagagata aaccacggta ggaaagccgc
     1681 ggcaacttcc acgaagcact cgcttcgtaa gaaaaggaaa caattccgat atcgctgggc
     1741 aattttcgcc caataaaacg caatagatga agagcagact tcgtcctcaa caagaaattg
     1801 gatgcaagaa aggaggtttt tccatgtcat tacaaacgat tgcggcacgg ttcacagata
     1861 aacccgtcaa actcgacggt gctcaggagc gcagggtttt aacgacgctc aaaatgattt
     1921 atgagggcgg ctccctcgac ggcaagaccg ccactttcgc cacccgcgac ctctcctgcg
     1981 tcgtggttgg ccggcaccgg ggtaattggc atttctttga gacctacaac cgcacaatct
     2041 ggatcaatct tcgcaacgga cgaacaatct ttcgctgcgc cggccacact gttaaatcca
     2101 gcaaaagcag ttggtggaag gagctgctcg cggtgcttcg catccgcaaa ctgaaggcga
     2161 tcgtcatttg aattttttgc cgcggcggcc catcaacata gtttttaagt cctgtggtta
     2221 tctgcggcgc aacatttgac cagcaaaacg caagcgtcgg ctagccacgc tcgcaattag
     2281 cgatgcagat tcacacaaac aagtcagctt cggcaatgaa tgcagtcgaa ttgcgccagt
     2341 gctattacca gcacgccgat gtgcgcgtgc ggatctgtga atttatcggc gcgacgacag
     2401 ttcataaatc gtcgtgcgag tttctcgccg ccagcgatga gaatgcggcc gcgccattca
     2461 agccctatcc gccacgcgct ctaaattcgc ttttagctgg tggttttgag attagccgct
     2521 cgctctggga ccacgatgca ttgatcgcgg atttcgatat cgaatacgtc aacttcgata
     2581 atccggcgga agcatttgtc gatcctgagc gagtctttgc gattcagcag ccggtcgtgg
     2641 aaacaattga gcagcttctg cgagagtacg gtatcgacgc gctgcacgtg ctcagtggac
     2701 gcggccacca ctttgtctgg cgaattgcgc aaaattcggc cctgttcaaa caactggcgg
     2761 agatcgggcg tggtcctccg agcctgtggg aatgtgaaac cgaagttcat ccgccaaacg
     2821 cgcatccggt tccgacgcag ctggcccgag cctttgccgg tctcggcttg gtcatggaat
     2881 tccttgcgca tcgggtaaaa caaattgccg cgccgcaaac ggaaattccg gtggaactga
     2941 cggctgtgga ggtcgggcca tccaaacatg ctcgggaaat gatttccatc gacatctccg
     3001 agtacggcga tccgcttttc tcgcgcgccg tacgcgtgcc gttcagcgtt tatttaaagc
     3061 cgtggcaaca atcctgggat ttcgatgttg atgttctggc caacttgcaa tcgcttttcg
     3121 tcattccatt gcaaggaatc gattggcggc agggagttgc cacgatgcgc gatgcgcgac
     3181 taacggtgaa actggcaggg cgagcctcga gcaaaattcc cgacgctacg cccggcacgg
     3241 caaaattgct gcgcgcctac gagcaatcga agctcgcaaa atttcatgct gacttttatt
     3301 cgcaggaaca acatccgccg aaacgctggc cggaaactta cgatcggcag cgtttggaca
     3361 ttctgccggc gtgcgcgcgc atcgcactcg aacagccaaa tgatctttta ctacggcccg
     3421 catttatccg gcggcttgtt cgcgtgatgt tggcgctcgg ctggcacccg cggcacatcg
     3481 cgggcttgat ctgctctaag taccgccgcg atttcggctg gacgcaattc gtcaatgtcg
     3541 atccggccac gcgcgccgat ttctacacgc gtgttttcgc cggtcttttc gcggccggca
     3601 ctgacgatct tgtcgatttc aactgcgcct cggctcagga gcaaggcacg tgcacatttt
     3661 caaactgcgg attcaatctg ctgaatttta aagaatccgc tttggaaagg aggaaacatg
     3721 acaagctggc ccatcggcct ttcaaccggc tgcttttatc atcggagcat tcttgattgt
     3781 ttgccgctga ttcgcgagag cggtttcagc atgatcgagg
//
LOCUS       DATDAJ010000169         5371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1002628, whole genome shotgun sequence.
ACCESSION   DATDAJ010000169 DATDAJ010000000
VERSION     DATDAJ010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5371
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1002628"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(268..2067)
                     /locus_tag="VIS53_04075"
     CDS             complement(268..2067)
                     /locus_tag="VIS53_04075"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VCBS repeat-containing protein"
                     /protein_id="HEY5766991.1"
                     /translation="MEKRRGAQPAITLFVFGVACAMTFSEVSAQIATFTTQQYPLLGN
                     THIAADFNGDGKPDLAGAGANAVSVMLGNGDGTFRPKTDFPIGMQTQAVAAGDFNSDG
                     RMDLMVTLNTPQLSLALLTGTGTGTFNAPTFFPNTSGFDSPAIAATDLNGDGRLDLVV
                     MHTIACFTAPCRSARSITILLGNGNGTFQTPSEIDVGTGPMTMAVLDLNRDGIKDVAI
                     GGGNTELSILLGVGNGSFVRQPVVTLVPGGDLFSACNDIGVGDLNRDSILDLVVPLGN
                     GNGNAILIGNGNGTFQVRSRIQIDETFAPLHVAVADYNRDGLLDIARTLGDGTNGLLQ
                     ILRGNGDGTFQAPNRYLVPPPVSSRGGIMILAGDWNADAKPDIAFVEGGAGAPTIDVL
                     TNTTGGVPSPTPPPSPTPPATPTPSPALGVASLSLNPTAVTGGNSSTGTVTLTAIAQA
                     ATTVTITSNNPAATVPTSVTVPAGSQSRSFSISTTQVQATTSAVITASLNGTSRSATL
                     TINPAAGGADTVSITRAEYDPGNRRLRIEATSTRANATLQAFVTSSNQLIGTLSNDGG
                     GRFRGEFSWPVNPQNITVRSNFGGQATRAVTAR"
     gene            complement(2512..2781)
                     /locus_tag="VIS53_04080"
     CDS             complement(2512..2781)
                     /locus_tag="VIS53_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766992.1"
                     /translation="MIRLTFYAEAANLEQQLLGIYRTVTLCVRKEEDLDKVAAWWQAM
                     TSICDEFGGRLAILSNEHPLCGAEFFYDRVLDLRNRCQRLQEMHR"
     gene            complement(2838..5030)
                     /locus_tag="VIS53_04085"
     CDS             complement(2838..5030)
                     /locus_tag="VIS53_04085"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HEY5766993.1"
                     /translation="MEFEKNTLLFGADPTSRIVAVELGESGTVRVYRRETDGSTVTDV
                     EPFHPFVWADSDVVDLGIETEKLRGNLNYGWLITVDSWKELIALRNGLKNAGRDFFAF
                     TDSIQHYLTATGRTLFKDLPFEELKRMQLEVLAIGGVGDPGNNDHVMSIALSDNTGWE
                     ELIVVDANNAEESERNALRRLTALIKQRDPDVIEGHDLFRVHLSLLVARAKKLKTKLD
                     WGRSGGFLRSRPSRLQIAEKTIDYPKFTIDGRHFVDTFLLAQFYDVGMRSLAGFERTD
                     VARHFDLCDSDQVSGLAGKELERAYLGDSEMFGRRAQCGVRETRALSDLLSPSYFIQA
                     QIFPYNYQDVIVRGNATRINALFLREYFRQRHSIPELPMPRAFEGGYTDIFFTGVACN
                     VWHCDVASLYPSIMLQFDCFPTTDELQIFRHLLTDLRNFRLEAKARMRAERDPARQHH
                     LQALQNTFKILLNSFYGYLGFAQGHFADFDAAARVTQIGRDLLKKMIDWLNARGAQVI
                     EVDTDGIYFVPPEKIDIDNLQEDLAKELPAGIDVEIDEQFDAKLSYKAKNYALLTKGG
                     DVIIKGGALKSRGLEKFQRVFLEEMIKMIMQGRSEAIADLRQEFERKIRNREWKIDML
                     MKTDTLQDSLDKYRAKIAGSARNRAAAYELALASGRNYRPGDQISYYIKTTPKKVAAY
                     EAAKLASEFDPENPDENVDYYAAKLDELVKKFSGFTTAAAPTQESLGL"
     gene            5184..>5371
                     /locus_tag="VIS53_04090"
     CDS             5184..>5371
                     /locus_tag="VIS53_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766994.1"
                     /translation="MKIRSLLILLLSMRIAPLILAQQMPQSLADAELPSLLGIYKDIH
                     SHPELSTQEQRTAAIVTK"
BASE COUNT         1159 a         1500 c         1497 g         1215 t
ORIGIN      
        1 gagcacgaga agatcgtacc gcttcaggtc cgcttttccc aaggcggtct caccgtcgtg
       61 gaccatgacg gactcatggc cagcttcagt aagggcgcgg cagatatgct gtgcaaggcg
      121 aacttcatct tcgacgacta ggatttccat aagttcaggt gtcggcgcgc cgccatcggc
      181 tagatgcgcc cgatgttgct gacgcgagtc gcgcgagtca taaaggaaga atcgcggagc
      241 cggagacgat tgagcttgcg cgaagggtta cctcgcagtt accgcacgtg tggcttgacc
      301 gccgaaattg ctgcgcacgg taatgttctg cggattgact ggccaggaga actcaccgcg
      361 gaaccgtccg ccgccatcgt ttgaaagcgt gccgatcagt tgattgctgg acgtgacaaa
      421 cgcctgcaag gttgcgtttg cgcgcgtgct cgtagcctca atacgaagtc ttcgattacc
      481 ggggtcgtat tccgctcgcg tgatcgaaac agtgtcggca ccacccgctg caggattgat
      541 ggtcaaagta gccgagcgcg atgtgccgtt gagcgaagcg gtgatcacgg cactcgttgt
      601 tgcctgcact tgtgtagtgc tgatgctgaa actcctcgac tgcgagccag ccggaactgt
      661 gacgctggta ggcacggtgg cagcggggtt gttgctggtg attgtaaccg ttgtcgcggc
      721 ctgggcgata gcggttagcg ttaccgttcc agttgaggag ttaccgcccg ttaccgccgt
      781 gggattcaac gacaagctgg caacgcctag agctggtgat ggagtcggcg ttgcgggcgg
      841 tgttggtgat ggcggtggtg ttggtgatgg cactccaccc gttgtgttgg tcaagacgtc
      901 aatcgtcggt gcacccgcac ctccttctac aaaagcgatg tcgggtttag catcggcatt
      961 ccaatcgcca gcgaggatca taatgccgcc cctactggaa acaggtggcg gcacaaggta
     1021 acgatttggt gcctgaaaag tgccgtcgcc attaccccgc aggatctgca gcaagccatt
     1081 agtgccgtca ccgagggtcc gggcaatgtc gagcaagccg tcgcggttgt aatcggccac
     1141 ggctacgtgc aggggagcga aagtctcatc gatctgaatg cgcgacctga cctgaaacgt
     1201 gccgtttccg ttgccgatca gaatggcgtt cccgttgccg ttacccagcg gcacgaccaa
     1261 atccaggatg ctatcgcgat tcaggtcgcc gacaccaatg tcattgcagg cagaaaaaag
     1321 gtcgccgccc ggcaccagtg tgacaactgg ttgccgcaca aaacttccat tgcccacacc
     1381 aagcaaaata gagagctccg tgtttccgcc gccgatcgcc acatccttaa ttccatcgcg
     1441 attcaaatcc agtaccgcca tggtcatggg gccggttccg acatcaatct cactcggcgt
     1501 ttgaaatgta ccgttcccgt tgccgagcag aatagtgatg ctgcgcgctg aacggcacgg
     1561 cgcggtgaaa caagcaatgg tatgcatcac cacgagatcg agcctgccat cgccattgag
     1621 atccgtcgcc gcgatagcgg gtgaatcgaa gccagaagtg ttcggaaaaa aggtcggtgc
     1681 gttgaaggtg cccgtgccgg taccggtaag cagcgcgagg ctcaactgag gagtgtttag
     1741 cgtaaccatt aaatccatcc tgccgtcgct gttgaaatca cccgcggcta cagcctgcgt
     1801 ctgcattccg ataggaaaat cggttttcgg tcggaacgtt ccatcgccat tccccaacat
     1861 gactgacact gcattcgcgc cggcaccggc gaggtcaggt ttgccgtccc cgttgaaatc
     1921 agcggcgatg tgggtgttgc ccagcagcgg atactgctgg gtcgtgaacg tcgcgatctg
     1981 cgccgaaact tcgctaaacg tcattgcgca cgccacgcca aaaacaaata aagtaatagc
     2041 cggctgcgca cccctccgct tttccattgt gtagctcctc atgcgtcaag agcatggaaa
     2101 acgatgcaac tgccagcaaa ccccaaaagg ttaccaactc gttaccttct cgcgcacgcc
     2161 gacggtcgct tgcgtgcgca gatatgtcat tctgcttacg ctgggtaccc ttgcgccgct
     2221 agcagacggt cttcatgagc atctcgaagt gaatttctcg ctcagccgag cgatcgctac
     2281 attgagggcg gtctatcgct tacgcgcaga tgggcgcgac agagtgcgat caggtggcga
     2341 cgaaacacgc gaaagtcggg tttgggagca ggcaaagtat cgaacagcct cgcaagctcg
     2401 cattgaatgt ctgctcggct agatccacgc tgggatcaaa tggatcgagg gcatgtgcga
     2461 agcggtcgta gagaactgcc aaacgcggga tctcctcccg ccaaaattcc gctagcggtg
     2521 catttcctgg agtcgctgac atctgttacg gaggtccaga acacgatcat aaaagaactc
     2581 cgccccacac agcgggtgtt cgtttgatag tatggcgagc cgcccgccga attcgtcaca
     2641 gatactggtc atcgcttgcc accaagccgc gactttatcg agatcctctt ctttgcgcac
     2701 acacagcgtc acagtgcgat aaatgccgag taactgttgt tcgagatttg ccgcttctgc
     2761 gtagaacgtc agacgtatca aagcaggacc tcatttcgtc cagaatacca ctttgcaatg
     2821 cgttcccgca agtgctgtca caaccccaag ctctcctgtg tcggcgcagc cgccgtggtg
     2881 aagccgctga attttttcac caattcgtcg agcttggctg cgtagtaatc aacattttcg
     2941 tcggggtttt ccggatcgaa ttcgctggcc agttttgctg cttcgtaggc ggcaaccttc
     3001 ttcggtgtcg ttttgatgta gtagctaatt tgatcgcccg gtctgtagtt gcggccacta
     3061 gccagtgcga gctcgtacgc cgcggcgcga ttacgcgccg acccggcgat cttagcgcgg
     3121 tacttatcaa gcgaatcctg gagcgtgtcc gtcttcatca gcatgtcgat cttccactca
     3181 cggttgcgaa tttttcgctc aaattcctgg cggagatcgg caattgcttc ggatctcccc
     3241 tgcatgatca tcttgatcat ttcttccaga aaaacgcgct ggaatttttc gagtccgcgg
     3301 gatttcagcg cgccgccttt gatgatgacg tcgccgcctt tcgtgagaag cgcgtaattt
     3361 ttcgctttgt aactgagctt ggcgtcgaac tgctcgtcga tttctacgtc aatcccggcc
     3421 ggcaattctt tcgccaaatc ttcctgcaag ttgtcaatgt cgatcttctc gggcggcacg
     3481 aagtaaattc cgtcagtatc gacctcgatc acctgcgctc cacgtgcgtt aagccagtcg
     3541 atcatcttct tgagcagatc gcgcccaatc tgcgttacac gcgcggcagc gtcgaagtcc
     3601 gcgaaatgtc cctgcgcgaa tccaagataa ccgtagaagc tgttgagcag aatcttgaag
     3661 gtgttttgca acgcctggag gtgatgctgt ctcgcgggat ctcgttcggc ccgcattctt
     3721 gctttggctt cgagccggaa gttgcggaga tccgtaagta aatgccgaaa gatttgcagc
     3781 tcatccgtcg tcgggaagca gtcgaactgc aacatgatag acggataaag cgacgcgacg
     3841 tcgcaatgcc agacgttgca cgccacaccg gtgaagaaga tgtcggtgta accgccttcg
     3901 aacgcgcgcg gcatcggtag ttcgggaatg gaatggcgtt gccgaaaata ttcgcgcaag
     3961 aacagcgcgt tgatgcgtgt ggcgttgccg cgcacgatca cgtcctggta attgtaagga
     4021 aaaatttgcg cctgaatgaa gtagctcggg ctcaggagat ccgataaagc gcgcgtttcc
     4081 cgaacaccgc attgcgcgcg tcgtccgaac atttccgagt cgccaaggta cgcgcgttcc
     4141 aattctttcc cggcaagtcc tgaaacctgg tcgctatcgc acaggtcgaa atgtcgggcg
     4201 acatcagtcc tttcgaatcc tgcgagagaa cgcatgccga catcgtaaaa ttgcgccagc
     4261 agaaatgtgt cgacgaaatg gcggccatcg atcgtgaact tcgggtaatc gatggttttc
     4321 tccgcgattt gcagccgtga cgggcgcgag cggagaaagc cgccactgcg tccccaatcg
     4381 agtttggttt tcagtttctt cgcgcgggcg acaagcagcg acagatgcac gcggaataga
     4441 tcgtggccct cgattacgtc cggatcacgt tgtttgatga gtgcggtgag tcgcctaagc
     4501 gcattcctct cggattcttc tgcgttgttc gcatcgacaa cgattaattc ctcccagccg
     4561 gtgttatccg acagcgcgat gctcatcacg tgatcgttgt tgccggggtc accgacgccg
     4621 cctatagcga gcacttcgag ttgcatgcgt ttcagctcct cgaagggcaa atccttgaac
     4681 aaggtgcgtc cagttgcagt gagataatgc tgaatcgaat cggtaaacgc gaagaaatcg
     4741 cggccggcgt tcttgagtcc gttgcgaagc gcaatcaatt ccttccagct atcgactgtg
     4801 atcagccagc catagttcag attgccccgg agtttctccg tctcgatgcc aagatcgaca
     4861 acgtccgagt cggcccagac aaacgggtga aacggctcga cgtcggtaac ggttgaacca
     4921 tcggtttccc gccgatacac gcgcacggtg ccgctctcgc ccaactcaac agccacaatc
     4981 cgcgatgtgg ggtccgcgcc aaagagcagc gtgttctttt cgaattccat cagtatccac
     5041 agattgcgca gatttacgca gattcaaaat cactcaccct cacctcaatc ctctccctcg
     5101 tagggagagg cggacgtgaa gcgccggtga gggtctaaaa caaatctgcg gcaatctgcc
     5161 aaatctgtgg atataagtcc ggcatgaaga ttcgttcgtt gttgattttg ttgctgtcga
     5221 tgcggattgc gcctctcatt ttggcgcagc aaatgccgca atcgctcgct gacgctgagc
     5281 ttccgtcttt gcttgggatc tacaaagaca ttcacagtca tcccgaatta tccacacagg
     5341 agcagcgcac cgccgcaata gtcacaaagg a
//
LOCUS       DATDAJ010000170         3130 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1016603, whole genome shotgun sequence.
ACCESSION   DATDAJ010000170 DATDAJ010000000
VERSION     DATDAJ010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016603"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..805)
                     /gene="prpB"
                     /locus_tag="VIS53_04095"
     CDS             complement(<1..805)
                     /gene="prpB"
                     /locus_tag="VIS53_04095"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEY5766995.1"
                     /translation="MTRQTKPARLRELIAKGAIMLPGVPNAAMARQVEHVGFDAVYVS
                     GAGMANSTAGVPDIGLLTLTEVAQLAGYIARAVKIPAIVDADTGFGGSENVARTIREL
                     EAAGLAGCHIEDQQFPKRCGHLSGKSLVDVEEMTEKIKAAVAARREPDFMIIARTDAR
                     AVEDFDRTVDRAQRYMEAGADAIFPEALQNAEEFRDFANKIDSPLLANMTEFGKSPLL
                     SFTELAGFGYRMVIFPQSAFRVSMKATDEFLRALKKSRTQKGSLDEMQTR"
     gene            complement(827..2197)
                     /locus_tag="VIS53_04100"
     CDS             complement(827..2197)
                     /locus_tag="VIS53_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY5766996.1"
                     /translation="MKTTLAHQLADYACALRFEDLSKEVVHEVKRRVIDSLGCALGAW
                     KEEPFVIARTVAGDFSAKHGSTIFGTDHKVPPDWAAFANGCGIRYFDFNDTYLSKEPA
                     HPSDNISAALAVAESVGSGGHELIAAIALAYEVQCRLCDAASIRARGWDHVTYGTFST
                     ALASAKLMKLDPANTRHAVNIAGVAGAAMRQARAGELSHWKGVAFATAARHGVFSALL
                     ARHGMTGPAPIFEGEMGFEKQLGVSLGNVGKKFLGSPSMILKTSIKYWPAEYHSQSAI
                     EAALFLRSQVDDLSKIKGVVIESHDASVDIIGSEPEKWTPRTRETADHSLPYITAIAL
                     IDGEITDRQFEPERFKDPEVWKFLENVKVERNKELSAMYPDAVGNIVHLDLADGRRLT
                     QRVDYPLGNAKNRLKDSAVEGKFLALVERIIGANRAKKIIELVWKLDEAKNVDALMQA
                     LHVQEN"
     gene            complement(2298..>3130)
                     /gene="hflC"
                     /locus_tag="VIS53_04105"
     CDS             complement(2298..>3130)
                     /gene="hflC"
                     /locus_tag="VIS53_04105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY5766997.1"
                     /translation="KMKLPVLDKVQRFDKRILAWEGPPIECPTKDKLYIIVDCFARWR
                     ISDPMLYYNRLNDERSALSRLDDILGSETRSAVATHDLVEIIRVTKGRKPVRDEELEK
                     TGTVLPTTIPDIEYGRGEIEKQITERTRQKIADFGIELLDERFKRSKYNPAVADKIIE
                     RMSSERHQIAARFRSEGRGEAANTNGQKESDVASISSTATKNALEIEGKADAQAAAIY
                     AAAFGTPEAQELYTFLRSLDVMRAAFEKDTTAVLSTNSDLGRMLKSMAEAVAPANPPR
                     "
BASE COUNT          616 a          950 c          817 g          747 t
ORIGIN      
        1 cgcgcgtctg catttcatcg agcgatccct tttgggttct acttttcttg agagcgcgca
       61 gaaactcatc ggtcgctttc atcgacacgc ggaatgcgct ctgcggaaaa atcaccatgc
      121 ggtaaccgaa tccggccaac tccgtaaacg aaagcagcgg gcttttccca aactcggtca
      181 tgtttgccag cagcggcgaa tcgatcttat tcgcaaaatc gcgaaactcc tcggcgtttt
      241 gcaatgcttc cgggaagatt gcgtcggcgc ccgcttccat gtaccgctgc gcccgatcaa
      301 ctgttcgatc gaaatcctca acggctcgtg cgtccgtccg cgcgataatc ataaaatcgg
      361 gttcgcgtcg tgcagctacc gccgctttga ttttttctgt catttcctcg acatcgacca
      421 gcgattttcc agaaagatgt ccgcagcgct tcggaaattg ctggtcttca atgtgacaac
      481 cagccagacc tgctgcttca agctcgcgga tcgtacgcgc gacattttcc gaacctccaa
      541 acccagtatc cgcgtccacg attgccggga tcttgaccgc cctcgcgatg tatccagcca
      601 attgggccac ttccgttagg gtcagcagac cgatatcggg aacgccagct gttgaattcg
      661 ccatccccgc gccactcacg tacaccgcat caaacccaac gtgctccacc tgtcgcgcca
      721 tcgccgcgtt cggcactccg ggcagcatga tcgcgccttt tgcgataagc tcgcgcagtc
      781 gtgccggttt tgtttgtctt gtcatatcag cgaagtcgag acatctctag ttctcctgga
      841 cgtgcagcgc ctgcatcagc gcatccacat ttttggcttc atccagcttc caaacaagct
      901 cgatgatctt tttcgctcgg ttcgccccaa tgatgcgctc gacgagcgcg aggaattttc
      961 cttcgactgc cgaatctttg agccggttct tcgcgttgcc tagcggataa tcgacgcgct
     1021 gggttaatcg ccggccatcg gcaaggtcaa ggtgcacaat attgccgacc gcatctggat
     1081 acatcgcgct caattccttg ttccgctcca ccttcacgtt ctccaaaaac ttccatacct
     1141 ccggatcctt gaaccgctcc ggctcgaact ggcgatcggt gatttcgccg tcaatcagcg
     1201 cgatcgccgt gatgtagggc aaactgtgat ctgcagtctc gcgtgttctg ggtgtccatt
     1261 tctccggttc gctcccgatg atgtccactg aagcatcgtg gctctcaatc accacgcctt
     1321 tgatcttcga gaggtcgtcg acctggctcc gtaaaaaaag cgccgcttca atcgcgctct
     1381 gactgtgata ttccgctggc caatatttga tgcttgtctt caaaatcatt gaaggcgatc
     1441 cgagaaattt tttgcccacg ttgcccaggg acacgccgag ttgcttctcg aatcccattt
     1501 ctccttcgaa aatcggcgcc gggccggtca taccgtggcg ggcaagtagc gcggagaaaa
     1561 cgccgtggcg cgccgcagtg gcaaaagcta cgcctttcca atgcgagagc tcacctgcgc
     1621 gggcctggcg catggccgcc ccggcgacac cggcaatatt cacggcatgc cgagtgtttg
     1681 ccgggtcaag tttcatcaac ttcgcggacg ccagcgcagt cgagaaggtc ccataggtca
     1741 catggtccca gcctcgcgca cgaatgctcg ccgcgtcgca taaccggcat tgcacttcgt
     1801 atgcaagcgc gatggccgcg atcaattcgt gtccgccaga gcccacgctt tccgcgacgg
     1861 ctagcgcagc tgaaatgtta tcgctgggat gcgccggctc tttcgacaaa tacgtgtcgt
     1921 tgaaatcgaa atagcgaatg ccgcagccgt tggcgaatgc tgcccagtcc ggcggcacct
     1981 tgtgatcagt gccaaaaatc gtggatccgt gtttcgccga gaaatctccc gctactgttc
     2041 gcgcgatcac aaacggttct tccttccacg cgccaagcgc gcagcccagg gaatcgatta
     2101 cgcgcctttt cacttcgtgc acgacttcct tcgaaagatc ctcaaatcgg agcgcgcacg
     2161 cgtaatcagc aagttgatga gcaagcgttg tcttcattga aaaagttggg atttcaatct
     2221 gccgacgatt tatgcaggag caagggcagc cgcccattcc ggctactgaa actcccaaac
     2281 aacggactgg acgccggtca acgcggcgga ttcgccggag ccacggcctc ggccatcgat
     2341 ttcagcattc ggccgagatc gctattggtc gagaggaccg ccgtcgtgtc cttttcaaac
     2401 gcggcgcgca tgacatcgag gctgcgcaaa aacgtataga gttcctgcgc ctcaggcgtg
     2461 ccaaatgctg cggcgtaaat cgccgcggct tgggcgtcgg ctttgccttc aatttcaagc
     2521 gcattttttg tggcggtgga actgatcgag gcgacgtcgc tttctttttg gccgttagtg
     2581 ttcgccgctt cgccgcggcc ttcggaacga aaacgcgctg cgatttggtg tcgctcactg
     2641 gacattcgtt caatgatctt atcggccacc gcaggattgt atttgctacg cttgaaacgt
     2701 tcgtcgagca gttcgattcc aaagtcggcg atcttctggc gggtgcgctc cgtgatctgt
     2761 ttctcgattt cgccacgccc gtactcaata tcgggaattg tggttggcag aacggtgccg
     2821 gttttttcca actcttcgtc gcgcaccggt tttcgcccct tggttacgcg aatgatttcg
     2881 accagatcat gcgtggccac ggcgctgcgc gtttcgctgc cgaggatgtc gtcgagacgc
     2941 gaaagagcac tccgctcgtc attcagccga ttgtagtaca gcatcggatc gctgatccgc
     3001 caccgggcga aacaatcgac gataatgtac agcttgtcct tggtcggaca ttcgatcggc
     3061 ggcccttccc aggcgagaat gcgtttgtcg aaccgctgca ccttatcgag gaccggcagt
     3121 ttcatcttca
//
LOCUS       DATDAJ010000171        13263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1019439, whole genome shotgun sequence.
ACCESSION   DATDAJ010000171 DATDAJ010000000
VERSION     DATDAJ010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 13263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13263
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1019439"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..786)
                     /locus_tag="VIS53_04110"
     CDS             complement(154..786)
                     /locus_tag="VIS53_04110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766998.1"
                     /translation="MVAINQKRSLLSRVGRWTAELVLVFVGVYAAFWLSNYQQHQQDA
                     ERRDRILAYIEQTLSEGIEGSKVNRAKEQEPEAAEFRRALDAGEMPPVRPFVFITDYS
                     PSDLATILQSGGVQLFDVQTLRALRNDESVIRWGLARMARYQKLSDELIVPNLDQDIS
                     FFYDPATRKLRKQFEIYPKALEARVNFANELERTHTELLKQIQAERKRNR"
     gene            878..1663
                     /locus_tag="VIS53_04115"
     CDS             878..1663
                     /locus_tag="VIS53_04115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5766999.1"
                     /translation="MEKSESVANLIQFVVDSVRQAHADDAPFHHLQFDRIFPDDFYAQ
                     MLEAMPVTEDYRAMSGKSKMGSNRPDGKPTRTKIDLFPEYVRHLPPKKRAVWDATGRV
                     RRSKELHSAFVQRLAPGLKGRFGENFAKVNMYPVPILTRDIPGYRIFKHTDSLWKGIT
                     VQFYLPADNSTPHIGTIFHEVLPNGRKPKKAQMPFSPNTGYAFAVADNTWHSADPVGP
                     EVKTRDSILLTYFVDAGPWRFVRNRGRRLANFVLNEARNLKRN"
     gene            complement(1758..3104)
                     /locus_tag="VIS53_04120"
     CDS             complement(1758..3104)
                     /locus_tag="VIS53_04120"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY5767000.1"
                     /translation="MFSPQTLSELKQLQKAALESDYAYRQVAHLANNIGPRLSGSAQA
                     AKAVEYVAAELKALGCEVQLEKVMVPHWVRGEETAALIQFPGQAPNTTQKVVLCALGG
                     SVATPTNGIEAEVLVVKNFDELKSMPREKVAGKIVLFNHPFDKQMAAEGRSFQAYGKA
                     VVYRSDGPSAAARQGAIACLIRSVGGADYRLPHTGMTDYAKDAPKIPAGAVTAEDADL
                     IVDLVRQGPVKMKLVLTPQTLPDVESANVIADIKGTEHPEQVVIVSGHLDSWDLGTGA
                     IDDAAGVAVSMETANLIQKLRLKPKRTIRVIAWMNEENGEAGSKQYAKNHEKEIANHF
                     AAMETDGGAGHPIGVNMKASPEVKKMFAPVANILQESGAGILDLVEHCGADIEPLEKA
                     GVPAFSPIQDNRFYFNYHHTAADTMDKIVPKELAENSAVVAVAAYALANMERSLPR"
     gene            complement(3441..3920)
                     /locus_tag="VIS53_04125"
     CDS             complement(3441..3920)
                     /locus_tag="VIS53_04125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767001.1"
                     /translation="MSSSNLAWLQGVGVAIGLCSLAFTSCNYDVPITSAPTRNVEQRL
                     LGDWISLDGKENMKVRALDDSNYVVYYDGDLFRTYHSDVAETPFASVQNLNSSDRKYA
                     YVIWKLSNDGKNLRLRNVNDKVVPKETRNSATVVALLTKNASNPELFGEEIEFKKEK"
     gene            complement(3917..4360)
                     /locus_tag="VIS53_04130"
     CDS             complement(3917..4360)
                     /locus_tag="VIS53_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5069 domain-containing protein"
                     /protein_id="HEY5767002.1"
                     /translation="MTTYPKSPKEMTKGMMYFPRMLDKIRLHLRGELHEDYQENFGAL
                     KAADGVCCNFLRVHHRDLIERVKQGGTDEEILEWCFEQGRRLNDGDLFVWNGFASKLG
                     WRDSVTPRLEERKKKMGIADRNDIQCIPDLIDFDEGRFPEASKTP"
     gene            complement(4405..5103)
                     /locus_tag="VIS53_04135"
     CDS             complement(4405..5103)
                     /locus_tag="VIS53_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767003.1"
                     /translation="MNETLFSQIQRLFERTYAQVGINLEDCLIDRTRCAQLSMLAGAS
                     ARELSELARTFLRRAGDQLYVGIYYSRWLIDQLEQHDPRAALGDRNIRSLITFVEELN
                     HALHAALQFKRGVREIASEDFARNLELQAQVDTYLVLLLFVAFFRKTQRVSATDRRWL
                     RFHLFVRQCPEAFRDANLRGRYLETSNLAASYTSFLDTLNAVRRLDEIRRFHSLDYGA
                     KRERILALTAGHAK"
     gene            complement(5100..5792)
                     /locus_tag="VIS53_04140"
     CDS             complement(5100..5792)
                     /locus_tag="VIS53_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767004.1"
                     /translation="MVRANCRARFTAADFDFIVRTLARSQTDQVSLVDLLSDVETRDS
                     ILDHPRLVDAILNHCGHLRISSQFYFYVLARHVLQQGGIGDRKLCDYVASLLETFSHA
                     SRLQISEETHHLAEQYISDILIALNRATPEQAFLLRAHIGNYSLFITGIFHENTQRRS
                     LRGGPDIKFYEQIGRTNYQLVSSHVVARRCELNDVFEGLADRFREVRLALNQLSDQLL
                     NLDEDARPSLSL"
     gene            complement(6345..7031)
                     /locus_tag="VIS53_04145"
     CDS             complement(6345..7031)
                     /locus_tag="VIS53_04145"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY5767005.1"
                     /translation="MLLSLRQLYEKKLGASDGDIGHVKDFYFNDQQWAIRYVVADTGS
                     WLSGRLVLIPPPAFGNLRQDADCLLVSLTRQQIENSPAIESHKPVSLQYQAYWDGVET
                     WGVGGFPEAPPPPHLMPSQQASACDDLRLQSTQALSGYPIQTSEGAIGHVIDFIMDDR
                     SWTICHLVVETGHWYSRKEIVISPKHIDRISYEESKVFVNVTKEAILEAPQYHVSPLG
                     EAYGDTRNFD"
     gene            complement(7950..8435)
                     /locus_tag="VIS53_04150"
     CDS             complement(7950..8435)
                     /locus_tag="VIS53_04150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767006.1"
                     /translation="MRLTIAAFVFLILGVTSVIHAERPDSTAGTSNGGTRKLFIDPSS
                     TSVALRGKASLIVSPLTHRHGNYVGDYQLKVRPYFFKSEKGSLLLAASDDAVRKLQTG
                     TAINFTGKAVTHKDGRTHIVLGRATPSSGNRGGVTFSIITDDAKIVFNTSYHFGTQPG
                     T"
     gene            complement(8456..9418)
                     /locus_tag="VIS53_04155"
     CDS             complement(8456..9418)
                     /locus_tag="VIS53_04155"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEY5767007.1"
                     /translation="MNDSSFISNGGDFTFPDKAKVGPERLFFRLPLDRINWFTSSFLI
                     GTLALTLTAVPLYLWFFGLDWFQVVLFFGMLAACGFSISLGYHRLFSHITFQASWPIR
                     LFTLIFGAAAFENSVLMWASEHRRHHKHVDHDDDPYCISKGFFFAHIGWLLFKLKTDQ
                     PYDNVADLQKDKLVCWQDRYVQWIAVLVSFGIPAILGALWNGWHGALGAFLIAGVARI
                     VVLQHCTFLINSACHTIGRQPYSTRCSARDSFLLALFTMGEGYHNYHHEFQHDYRNGV
                     KPWQFDPTKWLIWTLSKLRLVRNLRRVAEDKIESAQRQTRNASC"
     gene            complement(9415..9771)
                     /locus_tag="VIS53_04160"
     CDS             complement(9415..9771)
                     /locus_tag="VIS53_04160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767008.1"
                     /translation="MEPTITQNGALFAVQHRPVKGNYFQRHHRQIASPNKTISTLRTS
                     VGEFVFRQTPLGCYLELVVGNARWALGLFGTNEAAVRALKNGRTGFRTWDSLGRKTAA
                     NQIGTLSRWNKGEQTP"
     gene            complement(9809..10234)
                     /locus_tag="VIS53_04165"
     CDS             complement(9809..10234)
                     /locus_tag="VIS53_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family peroxiredoxin"
                     /protein_id="HEY5767009.1"
                     /translation="MNRNASALWKGNLHEGDGTLTTESGVLSKTQYSFRTRFAEGRGT
                     NPDELIAASLGGCFSMALSNELGLCGFHPQRIETTATATLEDLAAGWTVTHIQLDVHA
                     NVPDASQAGFMDAAIAAKTNCPISRLLKTNISMTASLDR"
     gene            10409..11302
                     /locus_tag="VIS53_04170"
     CDS             10409..11302
                     /locus_tag="VIS53_04170"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY5767010.1"
                     /translation="MELRHLRYFVGVAEALSFTKAAKKLHTAQPSLSRQVKNLEEELG
                     VRLLNRTKQLVTLTDEGRSFLADAKRLLALAAETVESVRRSHSGEVRALNIGYVSNLF
                     YDLLPRTLASFRQLFPTVSVNLFDMSCGEQFRALEDGKLDLGFVGLHEPIARRGLEFR
                     TIASYKTVAALPKDNPLAGKTTVALKALAPMFFIGMSEASYPYYHEWLSKTCHRAGFT
                     PKVLQDVDLERTMIHAISAGLGVALVPEQLKKLPHKNVVFRPVMPAVATEACVAWKGE
                     NPSAPLKAYVEIVERVGRSIR"
     gene            11497..11919
                     /locus_tag="VIS53_04175"
     CDS             11497..11919
                     /locus_tag="VIS53_04175"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5767011.1"
                     /translation="MDEAQNRLNRIFLGGFPSRIGSGEIHSLAVADWSPEVDISEDDQ
                     GYLLKADLPEMKKDDVRVTVEDGILSVSGERRCQKEDQKKKFHRIERSFGTFRRSFTL
                     PEDADSTKVTAEFREGVLKVHLPTTATPRSKAIQVKVA"
     gene            complement(12351..12560)
                     /locus_tag="VIS53_04180"
     CDS             complement(12351..12560)
                     /locus_tag="VIS53_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767012.1"
                     /translation="MSYPIHTYTELQQQIHDDLRIQHPEWVKPNGESPKCDSYDACLT
                     EMLGTLTRKGSNRPILPSHRALERQ"
     gene            complement(12584..12808)
                     /locus_tag="VIS53_04185"
     CDS             complement(12584..12808)
                     /locus_tag="VIS53_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767013.1"
                     /translation="MRKTTPTLTQSGLLVVLLQRQRYKIRQLAWRRAQRNQMGAALWS
                     TLTWPWRALTAPMPVRRSRPAFVGTVPRRT"
     gene            complement(12970..>13263)
                     /locus_tag="VIS53_04190"
     CDS             complement(12970..>13263)
                     /locus_tag="VIS53_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767014.1"
                     /translation="VEVLVAGVASPIQISIDERRRTSVPPREQAPIATSTQHQQMTTD
                     ALEKVITAINQADVSEQEKNEAKTLLRRLLRSKAAVSVLGPGAQSLAAKYFTE"
BASE COUNT         3038 a         3541 c         3544 g         3140 t
ORIGIN      
        1 gcgaagcatg aggccaggct ttcaaacatc tctgatttag cttcatgagg agcggttcca
       61 gaaatgattc tgagattgaa agcctggcct cgcggacttt gtccgctgcg ttgcagcttc
      121 gcttcgctca gaatgacatg atgaagtggg gtattaacgg tttcgctttc gttcggcttg
      181 gatttgtttg agcaattccg tgtgggttcg ttcaagctcg ttcgcaaagt tcactcttgc
      241 ttccagagct ttgggatata tctcgaactg ttttcgcaat ttcctggtgg caggatcgta
      301 aaagaaggaa atgtcctgat ctaggttggg tacgattagt tcgtcgctca atttctggta
      361 ccgcgccatg cgggccagtc cccagcggat aactgattcg tcgttgcgca gcgccctgag
      421 cgtctgcacg tcgaacagtt ggacgcctcc ggattgcagg atcgtggcta agtcgcttgg
      481 gctgtagtcg gtaatgaaaa caaacggacg caccggtggc atctcaccgg cgtccagcgc
      541 gcgccgaaac tccgccgctt ctggttcttg ttctttcgcg cggttaactt ttgagccttc
      601 gattccttcg ctcaatgttt gctcgatgta cgccaggatt cggtcgcgac gttctgcatc
      661 ctgctggtgt tgctgataat tactgagcca aaacgccgcg tagacgccta caaaaacgag
      721 gaccagttct gctgtccagc gcccaacacg tgagagaagc gaacgctttt ggtttattgc
      781 gaccacgggt accacgacgg cctgaagacc gccgctcctt gcttatccat tgcgtaacag
      841 aatgacattc ttaaattagc cgcctaaagg acaattgatg gaaaaatccg agtcagttgc
      901 aaatcttatc caattcgttg tcgattcagt acgacaggcc cacgcagatg atgcgccgtt
      961 ccatcacttg caatttgatc gcatttttcc cgatgatttt tacgcgcaga tgctggaagc
     1021 aatgccggta accgaggatt accgggcgat gtccggcaaa agcaagatgg gcagcaacag
     1081 gccggatgga aaaccgaccc gtacgaagat cgatcttttc cccgaatatg ttcgccattt
     1141 gccgccgaaa aaacgcgcag tctgggatgc gaccggtcgc gtgcggcgtt ccaaggagtt
     1201 gcactctgct ttcgtccaac ggttggcgcc ggggctgaaa ggccggttcg gagaaaactt
     1261 cgcaaaggtg aacatgtatc cggtacccat cctcacgcgc gacattcccg gataccgtat
     1321 cttcaagcac accgacagtc tttggaaggg gatcaccgtt caattttatc tgccggcgga
     1381 taattccacg ccgcacatcg gcacgatctt ccacgaggtg ttgcctaatg gacgcaaacc
     1441 gaagaaggcg cagatgccat tttcgccgaa tacaggttac gcgttcgccg tggccgacaa
     1501 cacctggcat tcggccgacc cggtcgggcc ggaggtaaaa acgcgtgaca gcattctcct
     1561 cacctatttc gtcgatgccg ggccgtggcg atttgttcgc aatcgcgggc gccggctggc
     1621 gaattttgtg ctcaacgagg cgcgcaattt aaagcgcaac tgaatgaaat tttcgccgct
     1681 gtagccacgg ccctgtgggc tgtcttccca gtcggaaaag agcgaaagtg ggaccggcca
     1741 caagccggtg gctacagtca acgaggcaat gacctttcca tgttcgccag cgcatacgca
     1801 gccaccgcca ctacagcaga attttccgcc aattctttcg gcacaatttt gtccatggtg
     1861 tcggcggccg tgtggtgata gttgaagtag aaacgattgt cttgaatcgg actaaaagcc
     1921 ggcacgccgg ctttctcgag cggctcgatg tcggcgccgc agtgttcaac caaatcgagt
     1981 atgccagcgc ctgattcctg caagatgttc gctacgggtg cgaacatttt tttcacctca
     2041 gggcttgcct tcatgttaac gccaatcgga tgaccggcgc cgccgtctgt ttccatcgct
     2101 gcgaaatgat tggctatctc tttctcgtga ttctttgcgt actgctttga tccggcctca
     2161 ccgttctctt cattcatcca cgcgatcacg cgaatcgtgc gctttggttt gagacgaagt
     2221 ttttggatca ggttcgccgt ttccatcgag actgcgacac ccgcggcatc gtcgatcgcg
     2281 cccgtaccca ggtcccatga atccaaatga ccggaaacga taacgacctg ttcggggtgc
     2341 tcggtccctt tgatgtcggc gatcacgttc gcgctttcca cgtcaggcag agtttgcggc
     2401 gtgagaacca atttcatttt cactggtcct tgtcgcacca gatcgacaat caaatctgca
     2461 tcctcggcag taaccgcgcc cgccggaatt ttcggcgcat cttttgcgta atctgtcatt
     2521 ccagtgtgtg gaagccgata gtcggcacca cccactgagc ggatcaaaca cgcgatagcg
     2581 ccttgcctcg cggctgcgct cggtccgtca ctgcgataga caactgcttt gccataagct
     2641 tggaagctac gaccttccgc ggccatttgt ttgtcgaacg ggtgattgaa cagcacgatt
     2701 ttgcccgcga ctttttcacg aggcatcgat ttcaattcat caaaattttt gaccacaagg
     2761 acctcggctt cgatcccgtt tgttggtgtg gccacactgc ctcccagcgc gcacaggaca
     2821 accttctggg tcgtgttcgg tgcctgtccg ggaaattgaa taagcgccgc tgtttcttcg
     2881 ccgcgcaccc aatgggggac catcactttc tcgagctgga cctcgcagcc gagtgctttc
     2941 aattcggcgg cgacgtactc gaccgctttt gccgcctgcg ccgatccact tagacgcggc
     3001 ccgatgttgt tggccagatg cgcgacctgc cggtaagcat aatcgctttc cagagcggcc
     3061 ttctgcaatt gtttcagttc cgacagtgtc tgcggcgaaa acacagatgg ggtcggcgat
     3121 ggcgatccgt tcggacttga tgcgaccgcc ggtatttgtt gcgcaatcgc tcgctgagca
     3181 cagagaaaca aggcgaatga gagaagaaag acgacggata attgattttc caatctgcgc
     3241 atctcgaacc ttgccagaag agccttcaat catcaattgt tgcaaatagg gaaccgagct
     3301 ggccgattac ttcttcgtca cacttcatgc agcttgtcat tctgagcgaa gcgaagaatc
     3361 tcaaatcctt tctgtctacg cgcttattaa gccaataatc agagatgttt cgcgtcgctc
     3421 aacatgacaa aaggcgacag ctatttttcc ttcttaaatt cgatctcctc cccgaacagc
     3481 tcggggttgc tggcgttttt cgtcaggagc gcgactacgg tggctgagtt cctggtttcc
     3541 tttgggacaa ccttgtcgtt gacgttccgc aacctcaggt tcttgccatc gttcgacaat
     3601 ttccaaatga cgtaagcata cttgcgatcg ctcgagttga ggttctggac actcgcgaaa
     3661 ggcgtttccg cgacgtcgga gtggtaagtg cgaaaaagat ctccgtcgta gtaaacgacg
     3721 taattactgt cgtccaacgc ccgcactttc atgttttcct taccgtcgag cgaaatccaa
     3781 tcgccaagaa gccgttgctc tacgtttcga gtcggagccg atgtgattgg gacgtcataa
     3841 ttgcaagacg tgaaagccag agagcaaaga ccaatcgcta cgccgacgcc ttgtagccaa
     3901 gctaagttcg atgaactcac ggagttttgc tcgcctctgg gaaccggcct tcgtcaaaat
     3961 cgatgaggtc tggaatgcac tgaatgtcgt tgcgatcggc gattcccatc ttcttttttc
     4021 gttcttcgag ccgcggcgtg actgaatcgc gccatccgag cttcgatgcg aatccattcc
     4081 agacaaagag atcgccatcg ttcaagcggc ggccctgttc gaaacaccat tccagaattt
     4141 cttcgtccgt cccgccctgc ttcacacgct cgatcagatc gcgatggtgc acgcgcagaa
     4201 aattgcagca cacaccgtcc gccgctttca gcgcaccgaa gttttcttga taatcttcgt
     4261 gcagttcgcc gcgcagatgc agccgaatct tgtccagcat ccgcgggaaa tacatcatgc
     4321 ctttggtcat ttctttggga ctttttggat aggtagtcat agacaaatga atcgcatcat
     4381 cccgtggcgg cgcaattttg cggcttactt tgcgtggcca gccgtcaacg ccagaattcg
     4441 ctctctcttc gcaccgtaat cgagggaatg aaaccgccgg atttcgtcca gacgacgaac
     4501 ggcattgagg gtgtcgagaa aacttgtgta gctggccgca aggttactcg tctcgaggta
     4561 acggccacgc aggttcgcgt cgcgaaatgc ctcgggacat tgccgcacga aaaggtgaaa
     4621 acgcaaccag cggcggtccg ttgccgagac gcgttgcgtt tttcggaaaa aggcgacaaa
     4681 cagcagaaga accagataag tgtccacctg cgcctgaagc tcaagattgc gcgcaaaatc
     4741 ttccgacgcg atctcgcgca ctccgcgttt gaactgcagc gcggcgtgca acgcatgatt
     4801 gagttcttca acaaacgtga tcagcgatcg gatattcctg tcccccaacg ccgcacgcgg
     4861 atcgtgttgt tcgagttggt caatgagcca gcgggaataa taaatgccga cgtaaagttg
     4921 gtcgccggcc cgccgcaaaa acgtgcgcgc gagttcgctc aattcccggg cggatgcccc
     4981 tgccagcatc gacaactgcg cgcagcgggt ccgatcaatc agacaatctt cgagattgat
     5041 tccaacctgc gcatatgtgc gttcaaataa tcgctggatt tggctgaaca gtgtctcgtt
     5101 cacaaagaaa gcgagggacg cgcgtcttcg tccagattca gtaactgatc ggaaagctga
     5161 ttcaacgcga gccgcacttc tctaaatcgg tccgccaatc cttcgaacac gtcattcagt
     5221 tcgcaacggc gcgccaccac atgcgaggaa acaagttgat agttcgtccg gccgatctgc
     5281 tcgtaaaact tgatgtccgg tccgccgcgc agactgcgcc gttgggtgtt ctcgtgaaag
     5341 attccggtga tgaacagcga gtaattgcca atgtgcgccc gaagcaggaa cgcctgctcg
     5401 ggagtggcac gattcagcgc gatcaagata tcggaaatgt attgttcggc gagatgatgt
     5461 gtctcctcgg aaatctggag ccggctcgcg tgcgaaaatg tttccagcaa cgacgcaacg
     5521 taatcgcaaa gctttcggtc cccgattccg ccctgttgca gtacgtggcg agcgagcacg
     5581 taaaagtaaa attgagacga aatccggaga tgcccgcagt ggtttagaat ggcgtcaacc
     5641 aagcgaggat gatcgagaat ggaatcgcgc gtctcgacgt cgctcaatag atcgaccaga
     5701 gaaacctgat ccgtttgcga acgcgctagc gtgcgcacga tgaagtcgaa atcagctgcg
     5761 gtaaaccgcg cccgacaatt cgccctgacc atcggggctt cataatgcgt gatctccgcc
     5821 cctgtggcaa gcaagattgc tagcgctgcg tgtattgtcg gaacaaggca tcttgtcttt
     5881 gcaccgcgcg gacttctaag cctgcctgcc cacgagcgcg atcttgcgaa atcgccaagc
     5941 gtttgctttt agccgggcct gctcatcaac gtgcgcaaga tcagggtcga gcctgacaat
     6001 aagcggtgag catgacacac caaaatggct ttaatacgtc aaataaatct atttcaaatt
     6061 cttaattaca aagtgactat gacaattgaa aaatgggtga gggaagaaaa gatgcgctta
     6121 ggacgctttg agatttactg tgctaatgca cagaaaaaag aagcaaaatc gtttccactt
     6181 aagatgccgc gaagttgttg gagtggacag tatcgcacct gggatgattc attagatagg
     6241 acctattgaa ggtggcggga atggcgtatc aaagactacc aaatggagga gccgccccgg
     6301 ataagtaccg attggtagag gggttcacac ctcgttataa ttcattagtc gaaattccgg
     6361 gtatcgccat atgcctcgcc gagcggagaa acatggtatt gcggcgcttc caggatggct
     6421 tccttggtca cgttcacaaa taccttggat tcctcgtaac tgatccggtc gatatgcttc
     6481 ggtgaaatca cgatctcttt gcgggaatac caatggccag tctccacaac caggtgacaa
     6541 atcgtccaac tcctgtcgtc catgataaaa tcaatgacgt ggccgatcgc tccttcgctg
     6601 gtttggatgg ggtagccgct gagagcctgt gtgctttgca gacgaagatc gtcgcatgcg
     6661 cttgcctgct gactcggcat aagatgcggc ggaggaggag cctcgggaaa accgcccacg
     6721 ccccacgttt cgactccgtc ccagtatgct tgatattgta gcgagactgg cttgtgcgac
     6781 tcaatcgcgg gactgttttc aatctgttgc cgagtcagac tcactagcag gcagtcggcg
     6841 tcttgacgca ggtttccgaa agcaggggga ggaatcagca ccaagcggcc cgatagccat
     6901 gaacctgtgt ccgcgacaac atagcggata gcccattgct gatcattaaa atagaagtcc
     6961 ttcacatggc cgatgtcgcc gtcagaggcg ccgagctttt tttcgtaaag ctgcctaagg
     7021 cttagcaaca taactttagc ctttctgaag acggatttga tctatccaga ccatgcgacc
     7081 aatacttgaa ttcgcaagcg cgggccaaac aagccacagc agcgcgtgcc atcgtatcac
     7141 ctcctgtgcg atcatgggcc cgtcaggaag ggcgtttatc cttccgcaaa ggaggtattg
     7201 cattgtgaac cttcactgcc cgcgctgccg gcgcgcgtaa tctcgcgacc gccgtcgcgg
     7261 cgatcgttgt gcccgacggg atcaagcgaa aggcaggtaa gggactcccg tgattattcc
     7321 ggcaaattca ccacccctcc aaaattaggc cgtacgaagt cagctggggt tggtgccgct
     7381 cgactatggc gattaaagtt taattcttat cttgatgctc cgaaggctct cctgaaggtt
     7441 cttaagcatt tcatgagtac gaattgtagc ctcatcaatt ccacgtcgaa actctgtcgt
     7501 gtcgcagctt gactgcgcgc agacaacttg ccgcggagct gcactacagc ggagatccga
     7561 acgattccgc ttcaatgaat gtttggctgc acaaggaagt gctgaagaag ctgtctgaga
     7621 acggtgaaag gttcctcagg aactgttgag gtaacgagcg tggccggagg cgtgattggt
     7681 ttgaccgatc cgaatgtgcc gatcgcgctt ctcattttcc acgttgtttg agagcacgca
     7741 cgtgggcccc gcgtgagaga atccgccatc tggtagaaca aagaactacg tttccgcgat
     7801 ttcgttgcct cgtacgccga gttttcgaaa cgaagcggac gggtggtcga atgcgtattc
     7861 cgattcatga tgcttcgagt tattccaccc ggatctgcct taggaccgac tgagccgtag
     7921 tcgattacaa ggaaagtcga tttgagcggc tatgtccccg gctgtgtccc gaagtgatag
     7981 gaagtgttga agactatctt tgcgtcgtcc gttatgattg aaaatgtgac gcccccgcgg
     8041 ttacctgatg acggtgttgc cctcccaagt acgatatgag ttctgccgtc tttgtgcgtg
     8101 acggccttgc cggtaaagtt gatggctgtt cccgtctgga gtttccgaac cgcatcatcg
     8161 gatgccgcca ggagtaaact gcctttctca ctcttaaaaa aatacggcct caccttgagc
     8221 tgatagtcac ccacataatt tccgtgtcga tgtgtaagcg gactgacgat caggctagct
     8281 ttcccccgca gggcaacgga agtggagctt ggatcaataa acagtttgcg tgtgcccccg
     8341 ttcgatgtcc ccgccgtcga atcaggcctc tcagcgtgaa taacacttgt gacgccgagt
     8401 attagaaaaa cgaaagccgc gatcgtcaat ctcacgatca gggagggtcc gcacatcagc
     8461 aactcgcgtt tctggtttgt cgttgcgcgg actcaatctt atcttccgcg acgcggcgca
     8521 gatttcgaac aagtcttagt ttcgacagtg tccagatgag ccacttggtc gggtcaaatt
     8581 gccacggctt cactccgtta cggtagtcgt gctgaaattc gtggtggtag ttgtgatagc
     8641 cttcgcccat ggtgaaaagg gcgagtaaga aagagtcgcg cgcactacac ctcgttgaat
     8701 acggctgtcg tccgatcgtg tgacacgcac tgttaatcag aaatgtgcaa tgctgcagca
     8761 caacgattcg cgcaactccc gcgatcaaga aagcaccgag cgctccatgc catccattcc
     8821 acagagcgcc gaggatggcc gggataccga agctgactag gacggcgatc cactggacgt
     8881 accgatcttg ccagcaaacg agcttgtctt tctgcaggtc cgccacgttg tcgtacggct
     8941 gatcggtctt cagcttgaaa agcagccaac cgatatgcgc gaaaaagaaa cctttcgaaa
     9001 tacagtacgg atcatcgtca tgatccacat gcttatgatg acgccgatgt tcactcgccc
     9061 acatcaaaac cgaattttca aacgcggcgg cgccaaaaat aagtgtgaaa aggcggatcg
     9121 gccagctagc ctggaaggta atgtgcgaga aaagccgatg ataacctaac gagatgctaa
     9181 acccgcaagc ggcaagcatc ccgaagaaga gtacgacctg aaaccaatca agcccgaaga
     9241 accagagata gagcgggacg gcggtcaatg tgagagccag cgtgccaatg agaaaggaac
     9301 tggtgaacca attgatacga tcgagtggca accggaaaaa caggcgctcc ggccccactt
     9361 tcgctttatc gggaaacgtg aagtcccctc cgttggagat aaaggaactg tcgttcatgg
     9421 cgtctgctcg cctttgttcc agcggctcag cgtaccgatt tgattggcag cggtcttgcg
     9481 tcccagcgaa tcccatgtgc ggaaacccgt cctgccgttt ttcagcgcgc ggacagccgc
     9541 ttcattcgtc ccaaataatc cgagtgccca acgagcattg ccgacgacga gctcgagata
     9601 acagccgagc ggagtttggc gaaagacaaa ttctccgaca gacgttcgta aagtggagat
     9661 cgttttattg gggcttgcga tctgtcggtg atgacgctgg aaataatttc cttttaccgg
     9721 tctgtgttgc accgcgaaca gggcgccatt ttgtgtgata gttggttcca taatcgtttg
     9781 tttgaagcgt ttcgaaagcg gcctgatgtc atcggtcgag actcgctgtc attgagatat
     9841 ttgttttaag caggcgagag atgggacagt ttgtttttgc cgcgatcgcc gcatccatga
     9901 aacccgcttg agaggcgtcc ggaacgttcg catggacgtc gagctggatg tgcgtgaccg
     9961 tccagcccgc ggctaaatct tccagcgttg cggttgcggt ggtttcaatg cgctgcgggt
    10021 gaaaaccgca aagaccaagc tcattggaca gggccatcga aaaacacccg cctaacgaag
    10081 ccgcgatcag ttcgtccgga ttggtgcccc ggccttccgc gaatcgcgtc cgaaaagaat
    10141 attgcgtttt agaaagaacg ccgctttcgg tggttaaagt cccgtcgccc tcatgaaggt
    10201 ttcctttcca aagagctgaa gcgtttcgat tcataaatgg caaagcaaag ggttacccct
    10261 ccgctcgttg gccggccaat atgttcttgg tagcgcgtca tgctttttaa gtatggccct
    10321 ctgtctgtcg ccgaccgatc tgtcgtaatt cgcaattcct tctttgcatt aacgtgccga
    10381 gtcggtttac gataggtctc tttctccaat ggaacttcgt catctgcgct acttcgtcgg
    10441 cgttgcggaa gcgctgagct tcacaaaagc cgccaaaaag ctgcacaccg cgcagccttc
    10501 actttcgcgg caggttaaaa atctggaaga agagcttggt gtccggcttc tcaatcggac
    10561 aaaacaactg gtcacgctga cagacgaggg ccgctccttt ctcgccgatg ccaaacgcct
    10621 tcttgctcta gcagccgaaa cggtcgagtc cgtgcggcga tcgcacagcg gcgaggttcg
    10681 cgcgctcaat atcgggtacg tcagcaatct cttttacgat ttgctgccga ggactctcgc
    10741 ttcgttccgt cagttgtttc ccactgtttc ggttaacctc ttcgacatgt cgtgcggtga
    10801 acaatttcgc gcgcttgaag atggcaagct cgatctgggt ttcgttggat tgcacgagcc
    10861 aattgcgcgg cgtggattgg aattccggac cattgcgtcc tacaaaaccg tcgccgcctt
    10921 gcccaaagac aatccgctgg cgggcaaaac gacggtcgcg ctgaaagctc tcgcgcccat
    10981 gtttttcatc ggaatgtcag aagcgagcta tccctactat cacgaatggt tgagcaagac
    11041 ctgtcatcgc gccggtttta ccccgaaggt tttgcaggat gtcgatcttg aacgaacgat
    11101 gatccacgcc atctccgctg gtttgggtgt cgccctcgtc cccgagcagt taaaaaaact
    11161 cccgcacaaa aatgtcgtgt ttcgcccagt catgccggcc gtggcgacgg aggcttgtgt
    11221 cgcgtggaaa ggcgaaaatc cgtctgcccc tttgaaagcc tacgtggaaa tcgtcgagcg
    11281 cgttggccgg agcatccgtt gatcaacgga atggccgccg gcgaaatcgc cgggcgtttg
    11341 cttttagccg ggcctcctca tcaacgtgtg caagattggg gtcgagcctg acaataagcg
    11401 gttagcgcga tgtaccaacc cggctttaac tcaatccaga aagaaaaata aatgaataca
    11461 ttgaataaag taacaacatg gaatccgctt agagagatgg acgaagcgca aaatcgctta
    11521 aatcgaatct tcttgggcgg ctttcccagc agaataggca gtggcgagat ccacagcctg
    11581 gcggtcgcag attggtcacc ggaggttgat atcagtgagg atgatcaagg gtatctcctc
    11641 aaagctgacc tgcctgaaat gaaaaaggat gacgttaggg taacagtcga agacggcatt
    11701 cttagcgttt ccggagaacg cagatgccag aaggaagatc agaaaaagaa attccatcgc
    11761 atcgagcgat cctttggcac tttccgacgc agcttcacgc tgcccgagga tgccgatagc
    11821 acgaaagtaa cggcggagtt ccgcgagggc gtgctgaaag tgcacctccc gacaacggca
    11881 acaccaagat caaaagccat ccaagttaag gtggcgtaat gctctaacac tgacggtgag
    11941 cgtgcggaac ggtccgcgcg tttgccccgg tgtaaggcgg ctaacttagt agcctgttcc
    12001 tttgaaccaa cgaagaacga cctcatgatc tcgaaaatta ttagccgcgc agcctgtctg
    12061 agagaactcg cttctaatcc caagtccttc tccaactgtc cagacttgca cggtggtgtc
    12121 ccggacttgc ccgaagataa aatcgacctg tcgcagactg gcgtgtgtcc tgtaaaacca
    12181 aggagcgaga ataatagcag ctacaacaac gaactgaatc acctagatgt gttaccggtc
    12241 atttacttcg cgtagctacg aaagcccgag gccctaagga ggttgtcgcc agacggaata
    12301 aggatagctc aacgagcttt aaaacatttt tataaatctt tagctcccag ttactgccgt
    12361 tccagtgcgc gatgagaggg aaggatgggt ctgttggatc cctttcgcgt caaagtgccg
    12421 agcatttccg tgaggcacgc gtcgtaagaa tcacacttgg gggattcgcc atttggcttg
    12481 acccattcgg gatgttggat ccgcagatcg tcgtgaatct gttgctggag ttcggtgtac
    12541 gtgtgaattg gataagacat ggcaattggc ctcggtaaaa gattcaagtg cggcgcggga
    12601 cggttccgac gaaagctggg cgcgaacggc ggacgggcat cggtgccgta agcgcgcgcc
    12661 acggccaggt aagggtactc caaagggcag cgcccatctg gttgcgttgt gcacgacgcc
    12721 aggccaactg ccttattttg tagcgctggc gttgcagcaa cacgaccagc agtccgcttt
    12781 gtgtaagagt cggcgttgtt tttctcatga cgtaatcttt ctatttttcc ttgtccgaaa
    12841 ggactctgta atttacgtcg tctttgagta cggtctggcc gtattttccg aaagactcac
    12901 cgtttcttgt cttgcgaatc ccagagtcgg aaagggagcc aacgaatctt ttgacgcccg
    12961 ctctctgctt tattccgtga aatacttcgc ggcgagggat tgcgcgccag ggcctaatac
    13021 gctaaccgct gctttgctac gcagcagtct tcgtaacaaa gttttcgctt catttttctc
    13081 ctgctcggac acatcggctt gattgatcgc tgtgatcacc ttctccaatg cgtctgtagt
    13141 catctgctga tgctgagtgc tcgttgcaat cggcgcctgt tcccgcggtg gaacgctggt
    13201 tctccggcgt tcatctattg agatctggat cggcgacgcg acaccagcta cgagtacttc
    13261 gac
//
LOCUS       DATDAJ010000172        13600 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1034649, whole genome shotgun sequence.
ACCESSION   DATDAJ010000172 DATDAJ010000000
VERSION     DATDAJ010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 13600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13600
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1034649"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..247)
                     /locus_tag="VIS53_04195"
     CDS             complement(<1..247)
                     /locus_tag="VIS53_04195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767015.1"
                     /translation="MSVSKRFRIAFFLGSLAILVAIARAQADSLEKLTDDFWAWRAKH
                     APFTADDVNRIERPGGIRDWSPASIDRRRKDLTGFEAR"
     gene            complement(244..1344)
                     /gene="ddlA"
                     /locus_tag="VIS53_04200"
     CDS             complement(244..1344)
                     /gene="ddlA"
                     /locus_tag="VIS53_04200"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: protein motif:HMM:NF002525.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY5767016.1"
                     /translation="MVKKIRVGIAFGGRSAEHEVSLQSAKNIIDAIDTNKYEVVLIGI
                     DKKGQWHLNEESRFLLPVTESGLPELPITGENLALVPGKQNNQLVAISGQQTLGSLDV
                     IFPVLHGPFGEDGTIQGLLKFANIAFVGAGVLGSAVGMDKDVMKRLLRDAGVPVARFI
                     VASRYSSQEIDFGYARAQLGQPLFIKPANLGSSVGIHKVKNREEFDRAVRDAFNYDNK
                     ILIEECISGREIECSVLGNDNPIASVPGEILPRHEFYSYEAKYLDENGAALEIPAKLP
                     AETSERIRQLAIKTFTVLCCEGMARVDFFLRNGEEIIVNEINTIPGFTRISMYPKLWE
                     ATGIAYSELIDRLIQLAIERFQREQRLKTDRA"
     gene            complement(1357..3192)
                     /locus_tag="VIS53_04205"
     CDS             complement(1357..3192)
                     /locus_tag="VIS53_04205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY5767017.1"
                     /translation="MKSSLLAAALCAGFATNIIAQSPTPAPSPAQPPPEYDLRWGVKI
                     PMRDKVELNATLHLPKTPDGSPPKTPVIFTLTPYISDTYHARAAYFASHGYVFALVDV
                     RGRGNSGGEFEPFANEPRDGHDVVEWLAKQPFCDGKVAMWGGSYAGFDQWATAKEFPP
                     HLATIVPAAAAHPGLDYPSYNNIGMTYDVQWFTLTSGRTPQDNLFGDQRFWRTKFLDA
                     YKKHLPFKSLDSFVGNPSVNFQRILKHPMADAYYDAMLPTREQFQKIALPILTITGQY
                     DGDELGALTYYRDHLANASPETRAKHFLIIGPWDHAGTRTPTDEVAGVKFGPGAIVDL
                     NDLHRQWYDWTMKAGTKPAFLKDHVAYYLLAPGNSGANGEWKYADNFETLTANPKTFY
                     LDSKNGDANGVFRSGTLDEKQPNTGTEAFVYDPLDLRRGENVEGTDPKEKTAALDQTF
                     ALSIGKDGLVYHTDPLPNETPLVGCPALTLWVSIDTPDVDLSADLYEIQPDGTSIALW
                     SDLRRLRYRESLREAKLMMPGEIVRCDFNPGTFVARRLMKGSRVRLVVTAVNSISWQK
                     NYCSGGIVAEETAKDARTCNVQVYHDAEHPSAIQLPLREATSPQK"
     gene            3432..5426
                     /locus_tag="VIS53_04210"
     CDS             3432..5426
                     /locus_tag="VIS53_04210"
                     /inference="COORDINATES: protein motif:HMM:NF022481.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2723 domain-containing protein"
                     /protein_id="HEY5767018.1"
                     /translation="MFLVALVVYSWTLAPTVTLTDSGELIVVAYGLGVAHPPGFPLWV
                     MLAHLASLVPVGSVAVRINFSSAVFAAFACAMLTLVVAELLVTASCFAAPRRRNRAAR
                     QGSNIESSKRGGILVFAPAVAAGLLMAFSRTLWSYATITEVYTLNTLLVLLVFFLVVR
                     WRRRIIETRTNSSAVFATHDTWIYTAAFVFGLAMGVHHVTVALTLPAIAVVVYRTEGP
                     KFFASRRLLYAALISITALILVYTYLPWAALRSPAMNWGNPRSLQEIWWHITGRQYRV
                     FFSFSPAAMGAQFIEFCRMVFREFGFAWLPLPLFLAGAGLASAYKRDRTAFWFLLLTV
                     LADLAYALSYEIAEDKDAYYLPAFISIAIGAGLGIHWLIQLAASRRSPIWTPSVAAAT
                     AIVLTLGTAFAANWPFNNRRHYFIADDYVENFFSTIATNGLLLTQDWQVASPMLYAQE
                     IEQRRRDVKVVDINLLRRSWYFDYLKLAYPSMIDRSREKIDPYVEILKQWERDPAAFA
                     RNQELTRRISMAFLEMIQAIVRNEIKVAPVYITNEVLVADSLNAYLTRWIPQTYQLVP
                     QGLVFNLTTDQSFHGSPDPRLRIRGLADGTVRFAKDDVANIKILPAYTKMLTNRGKYL
                     ALFNQHEGAILAFKEALALDPNLAAAQQGLAESMAKMGKP"
     gene            5581..6285
                     /gene="rplA"
                     /locus_tag="VIS53_04215"
     CDS             5581..6285
                     /gene="rplA"
                     /locus_tag="VIS53_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003637773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEY5767019.1"
                     /translation="MQTNRSKRYRAAAEQVNRTKDYSLADSVATLKKFSPTKFDQTVT
                     LSFRLGVDPKQSDQMVRGTCPLPHGSGKQVRVLVFAEGEAAKAATDAGAEFVGMKDLI
                     QKCQEGFQDFDVAIATPAAMADVRKLGKVLGPRGLMPNPRTGTVTEDTAKAVQEVKAG
                     RIEFKLDKNGNVAVPVGKFSFEENALVENANAVIEAVVRARPPTAKGRYLEGVTISAT
                     MSPGVRIDPGPYLSGV"
     gene            6310..6834
                     /gene="rplJ"
                     /locus_tag="VIS53_04220"
     CDS             6310..6834
                     /gene="rplJ"
                     /locus_tag="VIS53_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEY5767020.1"
                     /translation="MRPEKASIVSELSEALKRSPFVLVTDYRGMKVADFSELRSRLTP
                     AGAEVHVVKNNFLKLAMADSGFPVVGDQFAGQTAVVTGEADVAPVAKIFKTFATEFKL
                     AALRVGFVDRAVLSTAELETLAELPSREILQAQLLGLLLSPAVRLVSLFNQPAAALAR
                     LLSAKAEKEGASTA"
     gene            6958..7350
                     /gene="rplL"
                     /locus_tag="VIS53_04225"
     CDS             6958..7350
                     /gene="rplL"
                     /locus_tag="VIS53_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007654177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEY5767021.1"
                     /translation="MADTDKLVEQLSSLSVLEIAGLVKQLEEKWGVSAAAPVAVAAGP
                     AAGAGAGAAAPAAEEKTTFDVILTEMGANKIAVIKEVRSAVPGLGLAEAKALVEGAPK
                     TIKEGVTKQEADEIKKKVEAAGAKVEVK"
     gene            7631..11425
                     /gene="rpoB"
                     /locus_tag="VIS53_04230"
     CDS             7631..11425
                     /gene="rpoB"
                     /locus_tag="VIS53_04230"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEY5767022.1"
                     /translation="MSERIYFGSIKEAIEPPNLIEVQANSYVDFLQKDVSYSKRKNQG
                     LQAVFKEVFPIESYDEKAVLDFSHYDIGEPKLSPLEAQREGQTYSAPLHVTFQLREEK
                     GTKEEKVYMGEIPLMTPQGTFVINGAERVVVSQLHRSPGIAFESTVHVNGKVLYSFRI
                     IPDRGSWIEVQFDTADLLYIYLDRRKRRRKFLATTFLRALGYGSDEEVIKLFYSIETL
                     KLSDKLDEEQLASKVLTADIRDGEVTVARAFEPLTLATVRQIMALNIHEAKVIDISND
                     DTIVKALRKDPAHDQEEALKDIYRRLRPGDPPTVANARALLKRLFFDPKKYDLGRVGR
                     YKINQKLGINVDSSERILTDKDFIAAIKYLINLRRGEGTLDDIDHLGSRRVRTVGELL
                     ANQCRVGLARTERLVKERMTLFDINVDGMTPQKLINPKALSAVIRDFFGRSQLSQFMD
                     QTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRICPIETPEGPNIGLISS
                     MSTFARINEFGFIETPYRKVVNGRVTDEIEYLTADREENFLVAQANAPIDGRGHFSGE
                     KVSVRYRGDFLEVDPSKVNYMDVSPKQLVSVAAGLIPFLEHDDANRALMGSNMQRQGV
                     PLIVSEMPLVGTGLEEKVARDSHAVVLAVDSGKVASVTADQIIVTKDGHLPESKKKIK
                     TDSESGTYVYELRKFMRSNAGTCVNQKPIVRKGQHVKRGQVIADGPNTDRGELALGRN
                     VLVAFMPWNGYNFEDAIMISEKTVKEDIYTSIHIDEFEIGARDTKLGPEEITRDIPNV
                     SEEALRNLGPDGVVRVGAEVKPGDILVGKITPKSETELAPEERLLRAIFGEKAADVKD
                     TSLTVPSGTYGIVMDVKVSSRREVAHEKLTPAETKRQLKNIGEDHKRKREGLIEQLTD
                     SLSNVLLGEKIPLDVVNAKSGEIIIPANRKITKTLLRKLATAHDHIEIDPSPIRNRIR
                     EIIGGYEHKFAELELEKDRATDRVESGEEIEPGIIKQVKVYIASKRKLSVGDKMAGRH
                     GNKGVVARIVPEEDMPFLADGTPVDIVLNPLGVPSRMNVGQVLETHLGVAAKALGFRV
                     ATPVFDGIKEKQIRDYLREAKKKEGFTWVQENGKARLFDGRTGDPFDQEVVVGHIYMM
                     KLGHLVADKIHARAVGPYSLVTQQPLGGKAQYGGQRFGEMEVWALEAYGAAYTLQELL
                     TVKSDDVQGRTRIYESIVKGDNSLEAGTPESFNVLIKEMQSLGLDVKVGSQAPTFLES
                     VA"
     gene            11456..>13600
                     /gene="rpoC"
                     /locus_tag="VIS53_04235"
     CDS             11456..>13600
                     /gene="rpoC"
                     /locus_tag="VIS53_04235"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY5767023.1"
                     /translation="MNEHSWRELVGEERPVGFDQVAIGIASSDTMRSWSKGEVKNPET
                     INYRTFKPEKGGLFCERIFGPTRDWECSCGKYKRIKHKGVICDRCGVEVTLARVRRER
                     MGHIELAVPVSHIWFYKCMPSRIGLMLDMSARQLERVIYYEDYIVIDPGKTPLQKTQL
                     LNEVEYREAQEQYGEDFVAGMGAEAIKKLLSEIDLNKLNKELEKAMGATKSKQIRKKL
                     AKRLKLVQGFQSSRARPEWMILEVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINR
                     NNRLKNLLMLKTPDVIIRNEKRMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKG
                     KGGRFRQNLLGKRVDYSGRSVIVIGPELKLNQCGLPKKMALVLFEPFIIRRLKDLGYV
                     HTVRSAKKMIERQTPEVWDILDEVTRGHPVLLNRAPTLHRLSIQAFEPQLIEGEAIRI
                     HPLVCTAYNADFDGDQMAVHVPLSVEAQLEARMLMLAPNNIFSPSSGKPITTPSQDIT
                     LGCYYITQNPRAPKKDGRHLPLFADAYEVEFAMVEGTIKTHDRILFKNPDRGVQTIFG
                     NSDINVIETTAGRVIFNQIWPKELGFFNKAAGKKQLSDIIWRCYQIAGPAVTVTTLDK
                     LKELGFREATRAGISIGIEDMIIPKRKETELENAYKQVKQVDQQYRRGIITDGERYNK
                     IIDIWTHAGDQISNVMFREIEENQDRKEYNPIN"
BASE COUNT         3150 a         3523 c         3868 g         3059 t
ORIGIN      
        1 agcgcgcttc aaagccagtc aaatcttttc gacggcgatc aatacttgcc ggtgaccaat
       61 cgcggattcc gccgggccgc tcgatccggt tgacgtcgtc ggctgtgaac ggcgcgtgtt
      121 tcgcacgcca cgcccagaaa tcatccgtta atttctccag cgagtctgcc tgggcgcggg
      181 caatcgcgac gagtatcgcc agcgaaccca gaaaaaaggc gatcctaaat cttttgctaa
      241 cgctcacgcc cgatcggttt tcaatctttg ctcgcgctga aatctttcaa ttgcgagctg
      301 gattagtctg tcgattaatt cgctgtaagc aatgccggtc gcttcccaaa gcttcgggta
      361 catgcttatt cgggtgaatc caggaatcgt attgatttcg ttaacgatga tttcttcgcc
      421 atttctcagg aagaaatcga cccgcgccat tccctcgcag cagagcacgg taaacgtttt
      481 aatcgccaac tggcggatac gctccgaagt ctccgccgga agtttcgccg gtatttccag
      541 cgcagcgccg ttctcatcga gatacttcgc ttcgtacgag taaaattcgt ggcgaggcaa
      601 aatctccccg gggactgatg cgatgggatt gtcgttgccg aggacggaac attctatctc
      661 gcggccgctg atgcactcct cgatcaagat cttgttgtcg taattgaatg catcacgaac
      721 cgctcggtcg aattcctcgc gatttttgac tttatgaatg ccgaccgatg agccgaggtt
      781 tgcaggctta ataaaaagcg gctgtccgag ttgcgctcgc gcatacccga aatcgatttc
      841 ctgcgaggaa tatctgcttg ctacgataaa tcgggcaacg ggaacgccgg catctctcaa
      901 caatcgtttc atcacatcct tatccatgcc gacggctgag ccgagcacgc cagcaccgac
      961 gaacgcgata ttggcaaatt tcagcaatcc ttggatggtg ccatcttcgc cgaatggacc
     1021 gtgcaaaacc ggaaagatca catccaagga tccaagtgtt tgctgtccgg aaatcgctac
     1081 cagttggtta ttttgtttcc cagggacaag cgcgagattt tcgcccgtta tcggtagctc
     1141 cggcaatcct gactcagtta ccggaagaag aaatcgagat tcttcattga gatgccattg
     1201 ccctttctta tcgatgccga tcagcacaac ttcgtattta ttggtgtcga tagcgtcgat
     1261 aatgttcttc gctgattgca gggagacttc gtgctcggcg gaacgcccgc caaaggcgat
     1321 tccgacacga attttcttga ccacagcgtt ttcgctctat ttttgcggac tagttgcctc
     1381 gcgcaacggc aattgaattg cgctggggtg ttcagcgtcg tgatatactt ggacgttgca
     1441 agtgcgcgcg tctttggcgg tttcttcggc tacaattcct ccggagcaat aatttttttg
     1501 ccatgaaatc gaattcaccg cggtgacgac caggcgcaca cggctgccct tcatcaaccg
     1561 gcgcgcgacg aacgttcccg gattgaaatc gcagcgcacg atttcgccgg gcatcatcag
     1621 ctttgcttcg cgcaacgatt cgcgataacg taacctgcgc agatcgctcc acagcgcgat
     1681 actagtgccg tcgggttgga tttcgtaaag atcagcggaa agatcgacat cgggggtatc
     1741 gatggaaacc cacagagtca atgcagggca accgaccaat ggcgtttcgt ttggtagcgg
     1801 atcagtgtga taaaccaatc cgtctttgcc gatactcaat gcgaacgtct gatcgagtgc
     1861 ggcggttttt tcttttggat cggttccctc cacgttctcg ccgcgccgta gatccaacgg
     1921 atcgtaaaca aaagcctccg tgccagtgtt cggctgcttt tcgtccagcg tgcccgagcg
     1981 aaagacgccg tttgcgtcgc cgttcttcga gtcgagataa aaggtctttg gattcgcagt
     2041 caacgtctca aagttgtcgg cgtatttcca ttcgccattc gcgccggagt tgccgggcgc
     2101 gagcaaataa tacgcgacgt gatctttgag aaatgccggt ttcgttccgg ctttcatggt
     2161 ccagtcgtac cactgacggt gcagatcgtt taaatcgacg attgctccgg ggccaaattt
     2221 tacgccagcg acttcgtccg taggcgtgcg cgtgccggca tggtcccacg gaccgatgat
     2281 gagaaaatgt ttcgcccgcg tttcgggcga cgcgtttgcg agatgatccc ggtaatatgt
     2341 gagcgcaccc agttcgtcgc cgtcgtattg accggtgatt gtgagaatcg gcagcgcgat
     2401 cttttggaat tgctcgcgcg tgggcagcat cgcgtcgtag taagcgtcgg ccatcgggtg
     2461 cttgagtatc cgctggaaat taacggatgg atttcccacg aatgaatcga gtgatttgaa
     2521 aggaagatgc ttcttgtaag cgtccaggaa tttcgtgcgc cagaaccttt gatcgccgaa
     2581 aaggttgtcc tgtggggttc gcccgctggt gagcgtgaac cattgcacgt cgtaagtcat
     2641 cccgatgttg ttgtaggatg gataatcgag gccgggatgc gcggcggcag cgggcacgat
     2701 cgtcgccaga tgaggcggaa attccttcgc cgttgcccat tgatcgaagc ccgcgtacga
     2761 accgccccac atcgccactt tcccgtcaca gaatggttgc ttcgccagcc actcaaccac
     2821 gtcgtgtccg tcgcgcggtt catttgcgaa cggctcgaac tcgccgccag aattgccgcg
     2881 gccgcgaaca tcgacgagcg cgaacacata accgtgtgac gcgaagtagg cagcgcgcgc
     2941 atggtacgtg tccgagatgt acggcgtcag tgtaaagatt accggtgtct tcggcggcga
     3001 accatcggga gtctttggca aatgcaacgt cgcgttcagt tcgactttgt cgcgcattgg
     3061 aatcttgacg ccccaccgca gatcgtactc cggaggtggt tgcgcggggg atggcgccgg
     3121 agttggcgat tgcgcgatga tgttcgttgc gaaaccggcg cacaaagcag cggcgagaag
     3181 tgatgatttc atgttcgtgg tgattgaagc gggctaacga caggagaaca agattgtttg
     3241 ttgtagccga caatgcgtct tgcatcgcct tgatggtttg cagctacgcc agtttgcgac
     3301 acgataggca aatggcgcgt cgacccgcaa ggcccgtcca acgtcccaag gagacgctgc
     3361 ggaagcctgt acgcgaaacg agtagcgcgc gaccattctg ctctcaagca gaactgatct
     3421 gcgctggcgc ggtgtttctt gttgcgctgg ttgtatacag ttggacgctt gcccccacgg
     3481 tcactttgac cgacagcggc gagttgattg tggtggctta cgggctgggc gtggcgcatc
     3541 cgccgggttt tccgctgtgg gtcatgctcg cacatctcgc gtcgcttgtg ccggtcggaa
     3601 gcgttgctgt gcgaatcaat ttctcgtccg ctgttttcgc tgcgtttgcc tgcgcaatgc
     3661 tcactctcgt cgtggccgaa ttactcgtta cggcttcttg ttttgctgca cctcggcgaa
     3721 ggaacagggc tgcgcggcag ggcagcaata ttgagagttc gaagcgcgga gggattttgg
     3781 tattcgcgcc cgcggtcgcc gcgggattgc tgatggcgtt ctcccgcacg ctttggtcgt
     3841 atgcgacgat caccgaagtg tacactctca acacgctgct agtcctactc gtgttctttt
     3901 tggtcgttcg gtggcgtcgt cggatcattg aaacgcgaac gaattccagc gcggtcttcg
     3961 cgacacatga cacatggatt tatacagccg ccttcgtatt cggccttgcg atgggtgttc
     4021 atcacgtgac tgtggcgtta acgcttccgg ccattgccgt agtcgtttac aggacagagg
     4081 gtccgaagtt cttcgcgagc agacgccttt tatacgccgc gctgatttcg atcaccgcgt
     4141 taattcttgt ctatacttat ttgccgtggg cagccttgcg ctcgcctgcg atgaactggg
     4201 ggaatccgcg ttcgctccag gaaatttggt ggcatatcac cgggcggcag tatcgcgtat
     4261 tcttctcttt ttcgccggcg gccatgggag cgcagtttat tgaattttgt cgaatggtct
     4321 tccgtgagtt tgggtttgca tggctgcctt tgccgctatt tctggcgggg gcggggctcg
     4381 cgagcgcgta caagcgtgac cgcacggctt tttggttttt gctgttgacc gtactcgccg
     4441 acctagctta cgcgctgagc tacgaaattg ccgaggacaa ggacgcgtac tatttgccgg
     4501 cgttcatttc gatcgcgatt ggagctggac taggtatcca ctggttaatc cagcttgctg
     4561 cttcaagacg ttcgccgatt tggacaccat ctgtggctgc tgcgactgcg attgtcctga
     4621 cattgggtac agcgttcgct gcgaattggc cattcaacaa tcgcaggcat tatttcattg
     4681 cggatgatta tgttgagaac ttcttcagca ccatcgcgac caatggactg ttgctgacgc
     4741 aagattggca ggtcgcgtct cccatgttgt acgcgcagga gatagaacaa cgccgtcgcg
     4801 atgtgaaggt ggtggatatc aatctgctgc gccgctcgtg gtatttcgat tatctgaagc
     4861 ttgcgtatcc cagtatgatc gaccggtcgc gcgagaagat cgatccatac gttgagatcc
     4921 taaagcaatg ggagcgcgat cctgcggctt ttgctaggaa ccaggagctt actcgacgga
     4981 ttagcatggc attcctggag atgattcagg caatcgtcag gaatgaaatc aaggtcgcgc
     5041 cggtttacat caccaatgag gtgctggtcg ctgactcact gaatgcgtac ttgacccgat
     5101 ggatccctca aacctatcaa cttgtgccgc aagggctggt tttcaatctc actaccgacc
     5161 aaagctttca tggatcccct gacccgcgtc tccggatacg ggggttggct gatgggacgg
     5221 tgcgttttgc gaaagatgat gtcgcaaaca tcaagattct gccggcgtat acgaaaatgc
     5281 tgaccaatcg tgggaagtac ctggccttgt tcaaccagca cgagggtgcc atcctcgctt
     5341 tcaaagaggc gttggcgctc gatccaaatc tcgccgcggc acaacaagga ctggcagaga
     5401 gcatggcaaa aatgggcaag ccatagcagc gcacggctcg tttgctccgc aggtaaatca
     5461 tctttttgac aacaaaaaga taaccgctac gttccgtgtc ccgcttgctc ggctgagcgg
     5521 gataattaag caggagcctc gctattaagg tagcgaacgg cgtttgaact gcaccgaaca
     5581 atgcaaacaa atcgaagcaa acgttaccgc gcagctgcgg agcaagtaaa tcggacgaag
     5641 gactacagtc tcgccgattc ggtcgcgacg ctgaagaaat tttcgcccac taagtttgac
     5701 cagacggtga cgctctcatt tcgccttggc gttgatccga aacagtccga ccagatggtg
     5761 cgcggaactt gcccgcttcc acatggcagc ggaaaacagg tgcgagtgct cgtttttgca
     5821 gaaggtgaag cggcaaaggc ggccacagac gccggggcgg aattcgtcgg catgaaagat
     5881 ttgatccaga aatgccagga aggttttcag gattttgatg tcgcgatcgc tacacccgcg
     5941 gcaatggccg atgttcggaa gctagggaaa gtgctcggtc cgcgcgggct gatgcccaac
     6001 ccgcgtacgg ggaccgtcac cgaagacact gccaaagcag tgcaggaagt gaaagccggc
     6061 cgaattgaat tcaagctcga taagaatggc aacgttgccg tgccggttgg aaagttttcc
     6121 tttgaagaaa acgcgctggt ggagaacgca aatgcagtga ttgaagctgt agtgcgagct
     6181 cgtccgccga cggctaaggg ccgctacctt gaaggtgtga caatcagtgc gactatgtcg
     6241 cccggcgtcc gcatcgatcc aggcccatat ctgagcggag tgtaagaccg gaataattag
     6301 ctcgacagta tgcgaccaga aaaagccagc attgtttcag agttgtccga ggcattgaaa
     6361 cgctcccctt ttgtgctcgt gaccgattat cgcggaatga aggtagccga ttttagcgag
     6421 ttgcgaagtc gactgacgcc cgccggcgcc gaggtgcacg tagtgaagaa caattttctt
     6481 aaactcgcga tggcggactc tggtttccca gtagttggtg accagttcgc ggggcaaacc
     6541 gcggttgtta caggcgaagc agatgtagcc ccggtggcca agatttttaa gacgtttgcg
     6601 accgagttta agctggctgc gctcagggtt ggttttgtcg atcgcgcagt cctctccacc
     6661 gcggaattgg agactttggc ggaattgccg tcgcgcgaaa ttttgcaggc acaattgctg
     6721 gggctgctgt tgtccccagc ggtccgtctg gtgagtttgt tcaatcaacc ggccgcggcg
     6781 ttagcgcgac tgttgagcgc gaaagctgaa aaggagggcg catccactgc atgaattttg
     6841 tacggcagac attttgtctg tcggacaaat caacacaaac gaaattgtcc gagctagtgg
     6901 ctaccggctt taattcttcg aaggctttcg gagacggcaa ctggaggaaa aactaaaatg
     6961 gcagatacag ataaattagt agagcaactc agcagcctat cggttctgga gattgctgga
     7021 ttggtcaagc agctcgagga aaaatggggc gtcagcgccg ctgcgccagt agcggtcgcg
     7081 gcgggacctg ccgcaggggc aggcgccgga gcagcagctc cagcagccga ggaaaagacc
     7141 acatttgacg tgatcctgac agaaatgggc gcaaacaaaa ttgcagtgat caaagaggtg
     7201 cggagcgcgg ttccggggct cggccttgcg gaggcgaaag cgctcgtaga aggcgcgccc
     7261 aaaacgatca aggaaggcgt gaccaagcag gaggcggacg agatcaagaa aaaggtcgag
     7321 gccgcaggtg caaaggtcga agtcaaataa acaactcgaa tttgggcgct gtgcggcata
     7381 aaatctgttg cgcagcgcca acatccataa taagattaaa attcactaca gcacgccaga
     7441 cgtattttta acccggcgct aacaaggcaa atcacattac cggctacgag acggaggtcg
     7501 tcaatttgac aggtcaccgt tttggtggca tttttgcgct cttcgcccag cccagaaccg
     7561 gtaaatctgc ctgcgtcggt ccgcgtttgg tggagccggt gtgaggtttt agctcgtgag
     7621 ctcaagcact atgtcggaac gcatctactt cggaagtatc aaggaagcca tcgaaccgcc
     7681 caacctcatt gaggttcagg caaattcata cgtcgatttt cttcagaaag acgtctctta
     7741 ttcgaagcgc aaaaatcagg ggcttcaggc tgttttcaaa gaagttttcc ctattgaaag
     7801 ctacgatgag aaggcggtcc ttgatttcag ccactacgat atcggcgaac caaaattgtc
     7861 gccacttgaa gcgcagcgtg aagggcaaac ctacagcgcg ccgctgcatg tgacgttcca
     7921 gttgcgggag gagaaaggca caaaggaaga gaaggtgtac atgggcgaaa tcccgctcat
     7981 gacgccgcag ggtacgttcg tcatcaatgg tgcggagcgc gtggtggtga gtcaattgca
     8041 tcgttctccc gggatcgcgt tcgaatccac cgtccacgtc aacggcaagg tcctctatag
     8101 cttccgcatc attccagacc gcggctcgtg gatcgaggtg caattcgata cggctgacct
     8161 gctttacatt tatctcgacc gacgtaagcg ccgccgaaaa ttcctcgcga cgacgttcct
     8221 tcgcgcactc ggctacggct ctgacgagga ggtcatcaag cttttttata gcatcgagac
     8281 tcttaagctg agcgacaaac tcgacgaaga acagctcgcc agtaaagtgc tcacggcaga
     8341 tatccgcgat ggtgaggtga cggtcgcgcg cgcgtttgag cccctgactc tggcgaccgt
     8401 tcgccagatc atggcgctga atattcatga ggccaaagtc atcgacatct cgaacgatga
     8461 cacgatcgtg aaggcgctta gaaaggatcc ggcgcacgac caggaagaag ctctcaaaga
     8521 catttaccgc cgtctccgtc caggcgatcc gccgacagtg gccaacgccc gcgctttact
     8581 caagcgactc tttttcgatc cgaagaaata cgatcttggc cgagtcggcc gctacaagat
     8641 caatcagaag ctcgggatta acgtcgactc ttccgagcga attctgaccg acaaagactt
     8701 tatcgcggcg attaagtatt tgatcaatct gcgacggggc gaaggcacgc tcgatgacat
     8761 tgaccatctt ggcagtcggc gcgtccgcac tgtgggcgaa ttactggcga accagtgccg
     8821 ggtcggtctt gctcgcaccg agcgtctcgt caaggaacga atgacgctgt tcgacatcaa
     8881 cgtggatggg atgacgccgc aaaagctcat taatcccaaa gcgctcagcg cggtcatcag
     8941 agatttcttt ggtcgctcac agctgtcgca attcatggat cagacgaatc cactcgcaga
     9001 attgacgcac aagcggcgtt tgtccgcgct cggccctgga ggtttgagcc gggagcgcgc
     9061 cggctttgaa gtgcgcgacg ttcatccgtc gcactacggc cgcatttgtc cgatcgagac
     9121 acccgaaggc ccaaacattg ggttgatcag ctcaatgagc acctttgcgc gcatcaatga
     9181 gtttggtttt atcgaaactc cctatcgtaa ggtggtgaac ggccgtgtca cggacgagat
     9241 cgagtatctc actgctgacc gtgaagagaa cttcctcgtt gcgcaggcga atgcgcctat
     9301 cgatgggcgt ggccatttca gcggtgaaaa agtttcggtg cgttaccgtg gcgatttcct
     9361 cgaagtcgat ccgtcgaagg tcaattacat ggatgtttcg ccgaagcagc tcgtgtcggt
     9421 agctgccggc ctcattccgt ttctcgaaca cgacgatgcg aaccgcgcgt taatgggttc
     9481 caacatgcaa cgccaaggcg tgccgctgat tgtttctgag atgccgcttg ttggcaccgg
     9541 tcttgaagaa aaagtcgcgc gcgactcgca tgcagttgtt ctggcggtcg acagcggcaa
     9601 ggtcgcttca gtcacggctg accaaattat cgtcacaaag gacggccatt tgcccgagag
     9661 caaaaagaag ataaaaaccg attccgagtc tgggacatac gtttacgagc tccggaaatt
     9721 catgcgatcg aacgccggca cctgcgtgaa tcagaaaccg atcgttcgca aaggtcagca
     9781 tgtgaagcgc ggccaagtta tcgccgatgg gccgaacacc gatcgtggcg aactggcgct
     9841 cggccgcaac gtgctcgtcg cgttcatgcc gtggaacggc tacaacttcg aggacgcgat
     9901 catgatctcg gagaagacgg taaaggaaga tatttacacg tccattcaca tcgatgagtt
     9961 cgagatcggc gcgcgtgata caaagttagg cccggaggaa attacgcggg acattcccaa
    10021 tgtcagcgaa gaagctttac gcaatctcgg tccggacggc gttgtgcggg tcggtgcgga
    10081 ggtgaagccg ggagatattt tggttgggaa aattacgccg aagagcgaga cggaactggc
    10141 tccggaagag cggttgcttc gggccatctt tggagagaaa gccgccgatg taaaagacac
    10201 gtcgcttacc gtgccttctg gaacctacgg tatcgtgatg gacgtgaagg tttcatcccg
    10261 ccgcgaagtt gcacacgaga aacttactcc ggcggaaacc aaacggcagc tgaagaacat
    10321 cggcgaagac cataagcgca agagagaagg gctcattgag cagctcactg actcgctttc
    10381 caacgtcctg ctgggcgaaa aaattcctct cgatgtggta aatgccaaga gcggtgaaat
    10441 tatcatcccg gcgaatcgca aaatcacgaa aacgcttttg cggaaattgg cgactgccca
    10501 cgatcacatc gagatcgatc caagcccgat tcggaatcgg atccgcgaaa tcattggcgg
    10561 atacgaacac aagtttgccg agttggagct cgaaaaggat cgcgcgaccg accgcgtgga
    10621 aagcggcgag gagatcgaac cgggaatcat caaacaggtc aaagtttaca tcgccagcaa
    10681 gcgcaagctc agtgttggcg acaaaatggc gggccgtcac ggcaataagg gcgttgtcgc
    10741 gcgcattgtg cccgaggaag acatgccgtt cctcgcggat ggaaccccgg tcgacattgt
    10801 gcttaatccg ttaggcgtcc caagccgtat gaatgtgggc caggttttgg aaacccacct
    10861 cggcgttgct gccaaagcgc tcggattcag agtggccact ccggtcttcg atggaatcaa
    10921 agaaaaacaa attcgcgatt atctgcgtga ggccaaaaag aaggagggct tcacgtgggt
    10981 gcaggaaaac ggaaaggcgc gtctgttcga tggtcgcacg ggcgatccgt tcgatcagga
    11041 agtcgtagtt ggccacatct acatgatgaa gctcggccac cttgtggcgg acaagattca
    11101 tgcgcgggcg gtaggaccgt attcgcttgt cactcaacag ccgctcggcg gtaaagcgca
    11161 gtatggcggc caacgcttcg gtgagatgga ggtctgggcg ctcgaagcct atggggctgc
    11221 ctatacctta caggaattgt tgacggtaaa gtccgatgac gttcaaggcc ggacgcgaat
    11281 ttatgagtca atcgttaagg gcgacaactc gctcgaagct ggaacgcccg aatccttcaa
    11341 tgtgttgatc aaggaaatgc aaagccttgg tctggacgtg aaggtcggca gtcaggcgcc
    11401 cacctttctg gaaagcgtcg cataattttt agtttgacac ttaatcggag aaatcatgaa
    11461 cgaacattcc tggcgtgagt tagtgggcga agagcgccca gtaggttttg atcaagtcgc
    11521 aattggcatt gcctcgagcg acaccatgcg ctcgtggagc aaaggcgaag tcaaaaatcc
    11581 ggagacaatt aattaccgca cctttaaacc cgagaagggc ggacttttct gcgagcgaat
    11641 ttttgggccg actcgcgact gggagtgttc gtgcggaaaa tacaagcgca tcaagcataa
    11701 aggcgtgatt tgcgaccgtt gtggtgtgga agttacgctc gcgcgcgtcc gtcgtgaacg
    11761 gatggggcac atagagctgg cagtgccggt ttcgcacatc tggttttaca aatgcatgcc
    11821 ttcgcgcatc ggactcatgc tcgacatgag cgcccgtcag ctcgagcgcg tgatttacta
    11881 cgaagactac atcgtcatcg atccgggcaa gacaccattg cagaaaacac aactgttgaa
    11941 cgaagtcgaa tatcgcgagg cccaggaaca atacggcgaa gatttcgttg ccggaatggg
    12001 tgctgaagcg attaagaaac ttctctccga gatcgacctc aacaagctca acaaagagct
    12061 ggagaaagcg atgggagcga caaagagcaa gcagattcgc aagaaactag cgaaacgttt
    12121 gaaacttgtt cagggcttcc agagttcacg tgcgcgaccc gagtggatga ttctcgaggt
    12181 gctgccggtg attccgccgg atttgcgtcc tttagtccca ctagaaggcg gacgtttcgc
    12241 cacgtcggat ctcaatgatc tttatcggcg cgtgatcaat cgtaacaacc ggctcaagaa
    12301 tctgctcatg ctcaagacgc cggatgtcat cattcgaaac gagaaacgca tgttgcagga
    12361 agccgtcgac gctttgttcg acaacggcag acacggtcgc gccgtgaccg gcgcaggcaa
    12421 ccgtccgctc aaatcgctga gcgacatgct caaaggcaag ggcggccgct tccgtcagaa
    12481 cttgttaggt aaacgcgtcg attattcggg ccgctcggtg attgtcatcg gtccggagct
    12541 caagctgaat cagtgcgggc tgccgaagaa gatggcatta gttcttttcg agcctttcat
    12601 cattcgtcgg ctgaaagatc tcgggtacgt ccacactgtg cgcagcgcga aaaagatgat
    12661 tgagcgtcaa acgcccgaag tgtgggacat tcttgacgaa gtaaccaggg gccatccggt
    12721 cctcctgaat cgtgctccga ctttgcaccg tctctcgatt caagcgtttg aaccgcagtt
    12781 gatcgagggt gaagccattc gcattcaccc gctggtttgc accgcgtaca atgccgactt
    12841 cgacggcgac caaatggcgg tgcacgtgcc gctgtcggtc gaggcgcagt tggaagcgcg
    12901 catgctgatg ctcgcgccga acaatatttt ctctccatcg agcggtaaac cgatcactac
    12961 gccaagtcag gacatcaccc tgggttgcta ttacataact caaaatccgc gagcgccgaa
    13021 gaaggatggg cgtcatctac cgctatttgc agacgcgtac gaagtcgaat tcgcgatggt
    13081 cgaaggcacg atcaaaacgc atgatcggat tttgttcaag aaccccgatc gcggggtcca
    13141 aactattttt ggaaattctg atatcaacgt tatcgagaca actgccggtc gcgtcatttt
    13201 taatcaaatt tggccgaaag aacttggttt cttcaacaaa gcagcgggca agaagcaact
    13261 cagcgatatc atttggcgtt gctatcaaat cgccggaccc gcagttacgg ttactaccct
    13321 cgataagctg aaagagctcg ggtttaggga agcgactcgg gctggtatct cgattggcat
    13381 cgaggacatg atcattccaa aacggaaaga aaccgagttg gagaatgcat acaagcaggt
    13441 caaacaggtg gaccagcaat atcgtcgcgg catcatcact gacggcgaac ggtacaacaa
    13501 aatcatcgat atctggacgc acgccggcga tcaaatctcc aacgtgatgt tccgcgagat
    13561 cgaggaaaat caggatcgca aagagtataa tccgatcaat
//
LOCUS       DATDAJ010000173         4411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1040128, whole genome shotgun sequence.
ACCESSION   DATDAJ010000173 DATDAJ010000000
VERSION     DATDAJ010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4411
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040128"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..863)
                     /locus_tag="VIS53_04240"
     CDS             complement(63..863)
                     /locus_tag="VIS53_04240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5767024.1"
                     /translation="MRSLEGPDLTSEKTTQTDMSVPGKSAATRILVLEEHPLLREGMT
                     DFLNAQPDLQVCGEADNIRDARNAIAKSKPQLLVTALRLGTGDSLEFVKALKAEKPGL
                     LILVYSAFEEAIFAERSLRAGADGYVMKTAPKEEFLAAIRDVLSGNIYVSRDVAMRAF
                     KKSLESRPDHRSAPSAIGIEKLSDREMHIFNLLGSGLGNTQIAHSLSLSVKTIESHRE
                     NIKRKLDLSCSRDLVASAKKYVEGTFLPAAKGALVIKAKKKVVSFPAA"
     gene            complement(1399..2355)
                     /locus_tag="VIS53_04245"
     CDS             complement(1399..2355)
                     /locus_tag="VIS53_04245"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HEY5767025.1"
                     /translation="MSGQTAFTFQIVQAFVLVLFAIAPSSNFAAVKDRSASPQLAGYK
                     AVRVHYGPMNKMIMSAHINGQPANLLVDTGSNEIFLDTDAAATFGIGPSPRGLRYVGF
                     TEINGQLLPIAFMQSLTAGSMNFGSSPVLLRDSARSGTGKTHVDGVLGLQTLFRHKAV
                     INCRTRLVFFRVDQSRHMNLSPVASSEKFTRVPMHREASGALTVQCSIHGQPGRMLVD
                     TGAFVTTFPDTFFRSLGISSEPTRVSAHFPTGTTRRISAAQINDLKIGDFKVPPAKFG
                     VAALPRFALRQGGTRISGILGMDTLYICHAIIDLDGMNLFLK"
     gene            complement(2601..3356)
                     /locus_tag="VIS53_04250"
     CDS             complement(2601..3356)
                     /locus_tag="VIS53_04250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEY5767026.1"
                     /translation="MPLLSDIVSYTDRFLRIRDVGDWDNALNGLQIENSGRVTRIGAA
                     VDVSTRVLTEARKRGVDFLIVHHGLFWPGLRPVRGASRLQLLIAFENDIALYGAHLPL
                     DIHARVGNNAQLVAALGLKSAQPFLEEKGQPVGLKVRASLPRRELARKLQKALNGPVK
                     VFGFGPKQTREIGVVTGAAGSEIYRIADEGIDTFITGEAPHWAAVAAEEIGVNLLLGG
                     HYATEVFGVKALAAHLSKRFGIPWKFIDCPTGL"
     gene            complement(3431..>4411)
                     /locus_tag="VIS53_04255"
     CDS             complement(3431..>4411)
                     /locus_tag="VIS53_04255"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY5767027.1"
                     /translation="LRGRGIVWAVSASICPIASLLLLVLAPRSPATNAAWLAVFVGVI
                     GIAFGIFTALMMSRLVAKPIDQLRSAADAVSRGNLAVDLSRAGARRADEFGRLLCEFD
                     QMVRELRDKEKLRQTFGLHVGRRAAERILARDPGLSGVEEEITVMFVDMRSWTARASS
                     SPPAEIVEIMNDFFRVSVRAVEEEHRGMVNKYLGDGFMAIFGAGDSDSNHACDAVSAG
                     CEILGAVKGLNDELAARERAPIQIGIGIHSGPAIVGSVGSPQRLEFTAIGNTVNVASR
                     IQGLTKTVGRPLLVTKAVYDRAGDSFAFEELPPQEVRGIEGRVMIFAVRA"
BASE COUNT          974 a         1262 c         1207 g          968 t
ORIGIN      
        1 aatccgtgtt atccgtgtta tccgtggtga cccttcaagc aatcacccgg ggcgaagcct
       61 ccctacgcgg cggggaagct gaccaccttc tttttggcct tgatgacgag cgcgcccttt
      121 gctgccggca agaaagttcc ttccacgtat ttcttggcgc tggcaacaag atcgcggctg
      181 caactgaggt cgagcttgcg cttaatattt tcgcgatggc tctcaatcgt ttttacactg
      241 agactaagtg aatgcgcgat ttgggtgttg ccgagccccg agcctaacaa attaaaaatg
      301 tgcatctcgc gatcggacag cttttcaatg ccgatggcag aaggcgccga acgatggtct
      361 ggtcgcgact ccaacgattt tttaaatgcg cgcatggcca cgtcgcggct gacgtaaatg
      421 ttcccgctga gaacatcgcg aatcgcagcc aggaattctt cttttggtgc tgttttcatg
      481 acgtaaccgt ctgcgccggc gcgcaggcta cgctctgcga agattgcttc ctcaaaggca
      541 gaatagacaa ggatcagcaa accgggtttc tcagccttga gcgccttaac aaattccaga
      601 ctgtcaccgg taccgaggcg caaagctgtg accagcaact gaggcttgga tttagcgatc
      661 gcattgcgtg catcgcgaat gttgtcggcc tcaccgcata cctgcaagtc cggctgagca
      721 ttcagaaaat cggtcattcc ttcccgaagc aacggatgct cttccaagac caggattcgc
      781 gttgcggcgg actttcctgg aacgctcatg tcggtctgag tggtcttctc ggatgtgaga
      841 tcaggtcctt ccagtgaacg catgttgggt cctgggggga acagcatcac ctctgttatc
      901 agtatccatg ccaactcccg aaaaacgctc gctatgaacg aaagtttact atgcttacct
      961 ttgaatctgt aagcacttac aagagcgcgg tcttttgcag aataagtagt taatatcatt
     1021 aaagactaca atggtacgga ttcattctaa ggccgggttg gcgcattttt aggccggtcg
     1081 tgccggaatt tgatgcgcgc ttgatggcac cgccgccttg gctgtggggc ggaggagaca
     1141 aagcaggcga ttggggtcaa tcgcccctac cttcgtcggg catgctgtct gccgcaggga
     1201 tggacgcgcc gtggtgagcc tgccactttg attttgctgc ggagcgcgcc cgtctgggcg
     1261 cgtgccggca taacacaggc atccttgcct gtcccgtcga acgggcatcc tgcctgttcg
     1321 cgaacgagca ggctgggaag cctgcgcgac tcgtcagcct gaaaggctga gttactttgc
     1381 cgcagcgccc tcactcgctc atttcagaaa aagattcatg ccatcgagat cgattatggc
     1441 atgacagatg tacagcgtgt ccatccccaa aatgccactg attctcgtgc cgccttgccg
     1501 caaggcgaag cgaggtaacg cagccacgcc gaatttcgcc ggcggcactt tgaaatcgcc
     1561 gatcttcaag tcgttgattt gcgcagcgct gattcgacgt gtcgttccgg ttgggaaatg
     1621 cgccgatacc cgggttggtt cggaggagat tccgagcgat ctaaaaaagg tgtcgggaaa
     1681 agttgtgacg aatgcgcccg tatcgacgag cattcggccc ggctggccat gaatcgagca
     1741 ctgcaccgtc aacgcgccgc tggcttcgcg atgcataggg actcttgtga atttttctga
     1801 cgaagccact gggctgaggt tcatgtggcg cgactgatcg actctgaaga aaacaaggcg
     1861 cgttcggcaa ttgatcaccg ccttgtgacg gaacaaagtt tgcagcccaa gaacgccatc
     1921 gacgtgagtt tttcccgtac cggaacgggc tgaatcccgc agcagcaccg ggctgctgcc
     1981 aaaattcatg cttccggcag taaggctttg cataaaagca ataggtaaca gctgcccatt
     2041 aatttctgtg aagccaacgt accgcagacc tcgtggcgag ggccctatgc cgaatgttgc
     2101 ggccgcgtcc gtgtccagaa agatttcgtt tgagcccgta tcaaccagca aattcgccgg
     2161 ctgaccgttg atgtgggccg acatgatcat tttgttcatc ggtccgtagt gaactcgcac
     2221 ggctttgtag ccggctaact gcggcgaggc ggagcgatct ttaactgcgg cgaaattcga
     2281 gctcggcgcg atcgcgaaaa gaacaagcac gaatgcttgc acgatctgaa atgtgaaagc
     2341 ggtttgtccg ctcaaaattc ggttgcgcca acggcaccgt attatttcga gcctgaggcg
     2401 acgccccagg attcgcgaga ttaaaaagcc aacagcgctg aaagcgcgat ttacggccga
     2461 gacgaagttg gattccccca ctctaattga accgcgcttt cagcgcttgt tgctgctaat
     2521 catttccctg gggagaatgc cccaggttag agatgatcgc gcgcctttgg cgcttagggg
     2581 gcaaaatgcc tgtggtccgc tcacaatccg gttgggcaat cgatgaattt ccatggaatc
     2641 ccaaaccgtt tggataaatg cgcagccagt gcttttacgc cgaacacttc tgtagcgtaa
     2701 tgtccgccca atagaagatt cacgccgatt tcttcggcgg caacggcagc ccagtgcggc
     2761 gcttcccccg tgatgaatgt gtcgattcct tcgtctgcga tccgataaat ctccgagccc
     2821 gcggctccgg tcacaacgcc tatctcgcgc gtctgtttcg gaccgaaacc gaaaactttt
     2881 accggaccat ttaacgcctt ttgtaatttg cgagcgagtt cgcggcgcgg cagcgaggcg
     2941 cggactttta aaccgaccgg ctggcccttt tcttccagga acggttgcgc ggattttagg
     3001 ccaagcgcgg cgacgagctg tgcgttgttg ccgactcgcg catggatatc cagagggaga
     3061 tgtgcgccat atagcgcgat gtcgttttca aatgcgatca gcagttgcag gcgcgacgcg
     3121 cctcgcaccg gccgtaatcc cggccagaac aaaccgtgat ggacgattaa aaaatcgacg
     3181 ccacgttttc gagcctcggt caaaacgcgc gtcgaaacat caaccgccgc cccgatgcgc
     3241 gtgacgcgac ctgaattttc gatctgaaga ccattgagcg cgttgtccca atcgcccacg
     3301 tcgcgaatgc gcaaaaagcg atcggtgtaa ctgacaatgt cggaaagcaa aggcatgcct
     3361 gacgagtgta gaggcgtttg tgtgaaacgc cgaggcgaaa cataggcgca gacgcttggc
     3421 acaagcgcct ctacgcgcgc accgcgaaaa tcattacgcg cccttcgatc ccgcggactt
     3481 cctgcggcgg caattcctca aacgcgaacg agtcccctgc tcgatcgtac acggctttgg
     3541 taacgagcaa aggtctgcca accgtcttcg tcaggccttg aatgcgcgaa gcgacgttca
     3601 ccgtgtttcc aattgcagtg aactccaggc gttgcggcga accgacgctg cccacaatcg
     3661 ccgggccgga atgaattcca attccaattt ggatcggcgc gcgctctctt gcggccagct
     3721 cgtcattcaa acctttaacc gcgcccaaaa tttcgcaccc cgccgacaca gcatcgcagg
     3781 cgtgattcga atcggagtcg cctgcgccga agatcgccat gaaaccgtcg cccaaatatt
     3841 tgttgaccat tccacgatgt tcctcttcaa ccgcgcgcac gctaacgcgg aaaaagtcat
     3901 tcataatttc cacaatttcg gccggcggcg acgagctcgc gcgcgccgtc cacgaacgca
     3961 tgtcgacgaa catgacggtg atttcttctt cgacgccgct caatcccggg tcgcgcgcga
     4021 ggattcgttc tgctgcgcgt ctacccacgt gcaggccgaa agtttgacgc aatttctctt
     4081 tgtccctgag ctcgcggacc atctgatcga attcacatag caacctgcca aattcatccg
     4141 cgcgccgtgc gccggcacga ctaagatcga ccgcgagatt tccacgcgag acggcgtcgg
     4201 ctgcgctgcg cagttgatcg atgggtttcg ccacgagccg gctcatcatc agcgcggtga
     4261 aaattccaaa tgcgattcca atcacaccga cgaaaacggc gagccatgct gcgttcgttg
     4321 ccggtgatcg cggagccaaa accaacaaca aaagcgacgc gatcggacag attgacgccg
     4381 ataccgccca tacgattccg cggccgcgca g
//
LOCUS       DATDAJ010000174         2494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1044789, whole genome shotgun sequence.
ACCESSION   DATDAJ010000174 DATDAJ010000000
VERSION     DATDAJ010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1044789"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VIS53_04260"
     CDS             <1..776
                     /locus_tag="VIS53_04260"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEY5767028.1"
                     /translation="AVQSDVSVITPVALDHEELLGNTLSEIAGEKAGIIKPRVPVVSA
                     PQQPQAEEIIRARAAECGSPVQFVNETYDRSAVALRGEHQKQNAAVAIAAIQAANIEL
                     SEKSIVRGLAAIEWPARFQKWDERTIIDGAHNPAAARALGQTWREVFGEQKATLVLAV
                     LSDKDLRGICEALAPIAGSVILPKIRSERAAAPAELAKIFSIITPSLPHSISSTVGDA
                     LMLARENPNPILITGSLHFAGEVLAHLRGEPAAFEECAQ"
     gene            complement(834..>2494)
                     /locus_tag="VIS53_04265"
     CDS             complement(834..>2494)
                     /locus_tag="VIS53_04265"
                     /inference="COORDINATES: protein motif:HMM:NF020892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY5767029.1"
                     /translation="VSCARRLRPPVCHAPMPKTFFITTAIYYTNSSPHVGHAYEMVLA
                     DVIARYHRLKGEEVFFLTGVDQHGQKVQQSAAKAGVPPAEFVKGISQKFVDLAKTLDV
                     QYDDWAETIDDRHKKVVQGILQRLFEEGEIYKDKQAGYYSVRQEQFLTDKERGPDGEF
                     GPEWGDIEFREEENYYFKLSQHKDWLLQYLNKRADAVIPDFRQTELRNAVEKLSGDLC
                     ISRPRSRLDWGIELPFDKDFVTYVWFDALTNYISFAGYDPSLSTLSSQPSTFRDKWPA
                     LQIIGKDILVPAHGIYWLIMLHAIGFPDDQMPQLLVHGWWNIGGAKMSKSVGNIVDPF
                     VLADKYSAEALRYYLMSDIATGRDADFSEERLVERYNSDLANSLGNLLNRTLNMAQQY
                     RQGILRRPSDPTALLLTNTPVEFESAAAFFKSVLFGYSGSFDAFDVDASLDDAVMCAV
                     SCNGFIDSGKPWKIAKDPTQGSRLDEILYTLCESLRIIAILISPVTPRAAHGIFDQLN
                     WKMESSGKEERFSLGDAEWGRLPDKHGVGKPTPLFPRIEICEGV"
BASE COUNT          584 a          687 c          639 g          584 t
ORIGIN      
        1 acgctgttca gtccgatgtt tcagtcatta ctccggtcgc tctcgatcat gaagagttgc
       61 tcggaaatac attgtctgag atcgctggtg agaaagcagg aattatcaaa ccgcgcgtgc
      121 cagtcgtttc cgcgccgcag caaccgcaag ccgaagaaat cattcgcgcg cgagccgctg
      181 aatgcggttc gccagtgcaa ttcgtaaatg agacttacga caggtcggca gtagctttgc
      241 gtggcgaaca ccaaaaacag aatgccgcgg tagcaattgc cgcgattcag gccgcgaaca
      301 tcgagctcag cgaaaaatcg attgtgcgcg gactcgcggc aatcgaatgg cccgctcgct
      361 ttcagaaatg ggacgagcgc accatcatcg acggcgcgca caatcctgct gctgcgcgcg
      421 cgctcggcca aacgtggcgc gaagtttttg gcgagcagaa ggcgacgctg gtgctcgcgg
      481 ttctttccga taaagatttg cgcggtatct gcgaagcact cgcgcccatt gccggctccg
      541 tgatcctgcc gaaaatccgc agtgaacggg ccgccgcacc ggcggaattg gccaaaatct
      601 tctcgatcat tactccatca ctcccccact ccatctcttc aaccgttggc gacgcactga
      661 tgcttgcacg ggaaaatcca aatccgatcc tgatcaccgg ctcactccat ttcgccggcg
      721 aagtcctcgc tcatttacgc ggcgaacccg cagcattcga agaatgcgcg caatagttcg
      781 gcatctcaca gagacgccct acaaaatccg gttcaacttg tagggcgttt gtgtcaaacg
      841 ccttcacaaa tctcaatccg cgggaatagc ggcgttggct tgccgacccc atgcttatcg
      901 ggcaatctcc cccactctgc gtctccaagt gaaaagcgtt cttcttttcc gctcgattcc
      961 attttccaat ttagctgatc gaaaattcca tgcgctgcac gcggcgttac cggcgaaatc
     1021 aaaatcgcga tgatgcgtag cgattcacaa agagtgtaaa gaatttcatc taatcgactg
     1081 ccttgtgtgg ggtcttttgc aatcttccaa ggttttccgg aatctatgaa accgttacat
     1141 gaaactgcgc acatgacagc gtcatccaat gaggcgtcga cgtcgaaagc gtcgaaagaa
     1201 ccagaataac cgaataaaac tgatttgaag aatgccgccg cactctcaaa ttcaactggc
     1261 gtatttgtca gtaatagagc ggttgggtca gatggtcttc tcaaaattcc ctgccgatat
     1321 tgctgcgcca tgttgagagt gcggttaagc aggttgccta acgaatttgc cagatcacta
     1381 ttataacgct cgacaaggcg ttcttcggaa aaatcggcat cccgtcccgt ggcgatgtcg
     1441 ctcatcaaat agtaacgcag cgcctcggcg ctgtatttat cggcgagcac gaatggatcg
     1501 acaatgttgc cgacgctctt gctcatcttc gcgccgccga tattccacca gccgtgtact
     1561 aacaattgcg gcatctgatc atctggaaaa ccgatcgcgt gcagcatgat cagccagtaa
     1621 atgccgtgcg caggaacgag aatgtcctta ccgatgattt gcagcgcggg ccacttatct
     1681 cggaaagttg agggttgaga gctgagagtt gagagactcg gatcgtagcc ggcgaagctg
     1741 atgtagttcg ttagggcgtc gaaccagacg taggtgacga aatccttgtc gaacggaagc
     1801 tcgattcccc agtcaagccg cgatcttggg cgcgagatgc agagatcacc gctgagtttt
     1861 tcgaccgcat ttcgcagctc cgtctggcga aaatcgggaa tgactgcatc tgctcgcttg
     1921 ttgagatact gaagcaacca gtctttgtgc tgactgagct tgaaatagta attttcctct
     1981 tcgcgaaact cgatgtcccc ccactccggg ccgaattcgc cgtccgggcc acgttccttg
     2041 tcggtaagaa attgctcctg acgaaccgaa taatacccgg cttgtttgtc cttatagatt
     2101 tcaccctctt cgaataagcg ttgcaaaatt ccttgaacga ctttcttgtg ccgatcgtcg
     2161 atcgtctccg cccaatcgtc gtattgcacg tcgagtgttt tcgcaagatc gacaaacttt
     2221 tgtgaaattc ctttgacgaa ttcggccgga ggaacacctg ctttcgccgc ggactgctgg
     2281 accttctgtc cgtgttgatc gacgccggta aggaaaaaga cttcttcacc cttgagccgg
     2341 tgataacgcg caatcacgtc ggccagcacc atctcgtagg cgtgcccaac gtgcggcgaa
     2401 gagttcgtgt aatagatcgc tgtggtgatg aaaaacgtct tcggcattgg tgcgtgacac
     2461 actggcggac ggagacgacg cgcgcaactt acct
//
LOCUS       DATDAJ010000175         3608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1046038, whole genome shotgun sequence.
ACCESSION   DATDAJ010000175 DATDAJ010000000
VERSION     DATDAJ010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1046038"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /locus_tag="VIS53_04270"
     CDS             complement(<1..438)
                     /locus_tag="VIS53_04270"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5767030.1"
                     /translation="MIRIEILGSAAGGGLPQWNCACANCVAARAGEIDSQTQSSIAIG
                     ADSEEFQNWWLINASPDLPRQIENTTWLQPRRNASRNTPIAGVLLTNADIDHALGLLL
                     LRQQEKPLVVYATDETRTALGWLDRTLTRFCGIEWRTVTSKFQS"
     gene            complement(597..1103)
                     /locus_tag="VIS53_04275"
     CDS             complement(597..1103)
                     /locus_tag="VIS53_04275"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEY5767031.1"
                     /translation="MNAFWNSFETLLGLGVEPRDLTFVQISLRGIIVFLVTLATVRLG
                     HKRSLSRKTPFDAVLLVILAAVLSRAINGSAAFFATLGGGVVLVLLHRLFAFLAFYSH
                     RFGILVKGRPDVIVRDGQCDVAMMWRNHVSTHDLDEDMRLSVQADDLSHIRLARVERS
                     GDISFIKK"
     gene            1337..2056
                     /locus_tag="VIS53_04280"
     CDS             1337..2056
                     /locus_tag="VIS53_04280"
                     /inference="COORDINATES: protein motif:HMM:NF021492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767032.1"
                     /translation="MPTAPPPSRDVALETRFFWERFRKPIISAAIVILLAATAFTGYR
                     FYSDRRAAAASAALASANSAQDYEQIIARYPNTPAGADAYILLAAAQRKERKFTEANK
                     ALETFIAKYPEHELLSTAKMAMAANLDSMGKTDEALATYQQIASAYPNSYTAPLAMLS
                     QVYILKSKNRNDDARRICETMLTQYRTSIWAGEAMQQLRLLKPVTTSMPPPAAGPTVP
                     PMLAPAAPAPQAPPAPPPKKP"
     gene            complement(2118..2513)
                     /gene="rpsI"
                     /locus_tag="VIS53_04285"
     CDS             complement(2118..2513)
                     /gene="rpsI"
                     /locus_tag="VIS53_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY5767033.1"
                     /translation="MPQADEFTATGRRKTSVARVRMMAGSGKIDINGRTFEDYFPTVP
                     LQNVVLQPLQNAKAVNIYDVFIRASGGGIMGQAGAAQLAIARALLQVDANLRGPLKSE
                     GLLRRDPRMKERKKSGQPGARKRFQFSKR"
     gene            complement(2526..2954)
                     /gene="rplM"
                     /locus_tag="VIS53_04290"
     CDS             complement(2526..2954)
                     /gene="rplM"
                     /locus_tag="VIS53_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019394039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY5767034.1"
                     /translation="MKTFSAKASEVPRKWWLIDASDKVLGRVAVKAANLLRGKEKTIF
                     TPHVDTGDFVIVINAEKVRLTGKKEEQKSYMSFSGYVGGHKSESARSRRARHPELLVE
                     RAVRGMIPHNRLGRHVYRKLKVYRGDSHPHTAQQPEAVKL"
     gene            3134..>3608
                     /locus_tag="VIS53_04295"
     CDS             3134..>3608
                     /locus_tag="VIS53_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEY5767035.1"
                     /translation="MATSQNPKTAITPRRDEDFPEWYQQVVRAAELAEPSDVRGCMVI
                     RPWGYGIWENMQRQLDALIRATGHRNAYFPLFIPLSYFAKEAEHVEGFAKECAVVTHY
                     RLKQDEEAGLVPDPESKLTEPLVVRPTSETIIGASYAKWVQSYRDLPILINQWCNI"
BASE COUNT          804 a         1013 c          989 g          802 t
ORIGIN      
        1 agattgaaat ttcgaagtta ccgtccgcca ttcgattccg cagaaccgcg tgagagtgcg
       61 gtcaagccat ccgagcgcag ttcgggtctc gtccgtagcg taaacgacga gcggcttctc
      121 ctgttggcgc aggagcagga gacccagcgc atgatcaata tctgcattgg ttaaaagaac
      181 acctgcgatc ggagtgttac gcgatgcatt gcggcgcggc tgcaaccacg tcgtgttttc
      241 gatttgccgg ggcaggtcag gcgatgcgtt tattagccac cagttctgaa attcttccga
      301 gtcggcgccg atcgcgatgc tggattgcgt ctgcgaatca atttctcccg cgcgcgctgc
      361 gacgcagttt gcgcaagcac agttccattg tggcaggccg ccgccggccg cgctgccgag
      421 gatttcgatc cgaatcaacc gaacttatgg tctaatttcc cgcctgatca gaccgcgccg
      481 gcgtaacagg tgcattcaaa aaagatcggc accgttttga gcgtcggttt gatccacctt
      541 tttttcgttc tcatgagtcg ctcaactccc ataaatcata tgccatatgg gtcaacttat
      601 tttttgataa agctgatgtc gccgctgcgt tccacgcgtg cgagacgaat atgggagagg
      661 tcgtccgctt gtacgctaag gcgcatgtct tcgtccaaat catgggtgga gacgtggttg
      721 cgccacatca tcgctacatc gcattgtcca tcgcgcacga tgacatcagg cctgcctttg
      781 accaggatcc cgaacctatg ggaatagaat gcgagaaatg cgaaaaggcg atggagcagc
      841 actagaacca cgccaccgcc gagcgtcgca aaaaaagctg ctgaaccgtt gatggccctc
      901 gaaagtactg cggcaagaat gacaagtagg acggcgtcga acggagtttt ccgcgagagt
      961 gagcgtttgt gtccaagccg aacggtggcc agcgtgacaa gaaaaacgat gatcccgcgc
     1021 agtgaaattt ggacaaaggt caaatccctc ggttccacac cgaggcccag taaggtttca
     1081 aaagaattcc agaatgcgtt catagactac attgtatcgt ggcgggcaat tctccgtacg
     1141 agagaggtcg gtggtggaac acgttgtcct caacgagttg caagaatgca gcccggctgt
     1201 ctaacattcg cgccttcggc gattcccgct gtcatcgtct tcgggagaag ccgatccacc
     1261 gcttgcgcga caaaccttcg cgtggcataa gaccacgctt acccggtttt caaactgatc
     1321 cagcacacgc acgtctatgc caacagcgcc acctccatct cgcgatgtcg cactggaaac
     1381 gcgttttttt tgggagcgtt tcagaaagcc aattatctcg gcggcgatcg ttatcctgct
     1441 cgcagctact gcgttcaccg gttatcggtt ttattccgat cgccgcgcgg ccgctgcatc
     1501 agccgcattg gcgagcgcaa acagcgcgca agactacgaa caaataatag ctcgttatcc
     1561 caatacgcct gccggcgccg atgcgtacat tttgctcgct gcagcgcagc ggaaagaacg
     1621 gaaattcact gaggcaaaca aagcgctcga aacttttatc gcgaagtatc ccgagcatga
     1681 gcttttgagc acggctaaga tggcaatggc ggctaatctg gattcgatgg gcaaaacgga
     1741 tgaagcgttg gcgacgtatc aacaaattgc gtcggcttat cccaatagtt acactgcgcc
     1801 gctcgccatg ctttcgcagg tgtacattct aaagtcgaaa aatcggaacg acgacgcgcg
     1861 gcgcatctgc gagacaatgc tcacccaata ccggacgagt atttgggcgg gcgaggcgat
     1921 gcagcaactc cgcctgttga agccggttac gacgtcgatg ccgccaccgg cagcgggacc
     1981 aaccgtcccg ccgatgttgg ctcctgccgc gccagcgccc caagctccgc ctgcgccgcc
     2041 gccgaagaaa ccatagggta gggcgcgtca ctctgtgcgc gccgccttcg gcgggcagag
     2101 gactgccgcc ctacctctta gcgcttggag aactgaaaac gcttccgcgc gccgggttgc
     2161 ccggatttct ttcgctcctt catgcgcgga tcgcgacgca gtaggccctc ggatttgagt
     2221 ggacctcgca aatttgcgtc gacttgaaga agcgctcgcg cgatcgcgag ttgtgccgcg
     2281 ccggcttggc ccataatgcc gccgccgctg gcgcgaatga acacatcgta aatgttaact
     2341 gccttcgcat tctgcagagg ttgcaacaca acattctgca agggcacagt cgggaaataa
     2401 tcttcgaagg tccggccgtt gatatcgatt tttccgctgc ccgccatcat gcgaacgcgt
     2461 gcgactgatg ttttgcggcg acctgtggcg gtgaattcgt cagcttgtgg catagatttg
     2521 gacctctaaa gtttgacagc ttcgggctgt tgcgcggtgt gcggatgcga atcgccgcga
     2581 tacactttca gcttccgata aacatgccga ccgagccgat tgtgcggaat cattccgcgg
     2641 acggcgcgtt cgactagcaa ttcaggatgg cgagcgcggc gcgaccgggc actctcagat
     2701 ttgtgtccgc cgacgtaacc ggaaaaactc atataacttt tctgttcttc cttcttcccg
     2761 gtgagtcgga ctttttccgc gttgatgacg atgacgaaat ctcccgtgtc cacgtgtggc
     2821 gtaaaaatgg ttttctcttt gccccgcagc agattagccg ctttcacagc tactcttcct
     2881 agcaccttgt cgctcgcatc gatcagccac catttgcgtg ggacttcgct ggctttggca
     2941 gaaaacgttt tcatcgctgg aaaaagggca cgaaaactac gggagcggca aggacctgtc
     3001 aacctgagcg tgactgattt acatcgacaa ttgcttctct cttgcacaaa tcatccccgt
     3061 caaaaacacc tcttggcggc tgacacagcc gccctacaat tgtagggcgt ttctgtgaaa
     3121 cgccgatttt acaatggcaa cttcacaaaa tccaaagacc gcaatcacgc cgcggcggga
     3181 cgaagatttt ccggagtggt accagcaggt ggttcgcgcc gctgaattgg cggagccttc
     3241 tgacgtgcgc ggttgcatgg tcattcgccc gtggggctat gggatatggg aaaacatgca
     3301 acggcagctc gacgcgctga ttcgcgccac cggccatcgc aacgcttatt ttcccttatt
     3361 cattccgtta agttatttcg ccaaggaagc tgagcatgtc gaaggcttcg ccaaagaatg
     3421 cgccgtggtt acgcattacc ggctcaaaca ggatgaggaa gccgggttgg tgcctgaccc
     3481 ggaatcgaaa ttaaccgaac cgcttgtggt tcggccgacg agtgagacga tcatcggcgc
     3541 gagctacgcg aaatgggtgc aatcgtatcg cgatttacca atcctgatca accagtggtg
     3601 caacatcg
//
LOCUS       DATDAJ010000176         5634 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1059920, whole genome shotgun sequence.
ACCESSION   DATDAJ010000176 DATDAJ010000000
VERSION     DATDAJ010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5634
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1059920"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..5611
                     /locus_tag="VIS53_04300"
     CDS             26..5611
                     /locus_tag="VIS53_04300"
                     /inference="COORDINATES: protein motif:HMM:NF019323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
                     /protein_id="HEY5767036.1"
                     /translation="MALKRCRRILVSFSCVLALGFTVAAFAQDEEEASNAKPDAGGIV
                     MEPSSGKIAEGDTITITFPVSMIAADLIDVGDQASPFVSEPKLDGTFLWKSQTEGVFT
                     VSGVVAEAQHRLTLAPGLKDATGKPFVVKDWSAEFKTPKFAITTEFNERKRLPARPQI
                     YLDSTYAVRLDEAAQHIYFQDREERQRFPVEVIQTAEGKAADSLEATGFRVTSRAPLP
                     VGHTFDLIVNGLLDAKSRRPLPYLQVMPAGKTEPLEVQWLGAFNHPLEDPVIRIKFDD
                     FMDPVEVTPERIRVVPAVEKVKLLASGDQIAITGDFDLKQHYKVTISPELKGDRGYGV
                     QSESRWGATFRPKESCLIFPSTQVFARARQELRFAFFQVNTPQVTWKLARIPAEKLSA
                     VTTRVKEFEKDARDSVTGTVVINPRTGFAKEFQTELLVEAFQLPVASSGAFEATSNDT
                     ETRRDVRCTPAEASAKAGVLPANEVFAGPYLFEASATLPDGRVVGNRSIICVNDYLLT
                     QKRTPTKVIMRLAKMSDASSMAGVTIRALTDENIELARAITDKEGIAEFPKGRVFPKS
                     RDSKAKNTHLFIADTTAGPALQFAEATAYSSGIDSAPSPNRPQAEIITDRNLYRPGHT
                     VKMKGLARDVTDSSGLTIPVGTSVHWTIKESDGSRVVGEGDTTLSAYGGWEAEWNVPE
                     KAKLGSYEVRCALGGRDYGGVTVISVQEYRVPLFSVMVETTTPEVGTTAHARIASAYF
                     HGAPNAGARVHWKASWTTLADFVSDSDEPYRKRFNAYSEVGPRLDVDSEDIKTIEGDT
                     QLDAHGFATIACESPFKDNPAVGRTSIIWRADVTSIDGQTLSGGDTATLFATETRLGV
                     RVEEQTTEPAGIKVDIDALDPEDEKKDGVLVRADLFHVTTKTVKEQIAPFVYRYRNTD
                     QFAKVASQESKTPAELVFPTTETGRYVVAVNATKVKAPVVSDEITVTGEKPAQLPVVN
                     ETTFKIDRRAEPFLPGEKAAFTIEAPFGGVAWVSVETDEVLDTLLVPVKGNAGRIEVP
                     IKENYAPNAAVSIYLVKPGRENELPLERFAYSEIDVRRPDRELKVAPRLASNTAKPGD
                     VVRGEVLVTSQDKPVADADLLVFAVDDAVLTLGDWKLPDIGARFYPRNGFAVRTYEAL
                     HGYIESLAKLSLTQKGFVIGDGGEEAISNIKNVRKEFRTLAFWQGSLKTGADGKVAFE
                     FVAPDNLTTYRIVAVGQTRMNQFGGDATETVKISKPLLIDLALPRFLREGDEVELRAV
                     VRQNFAEKDGVTTRCVTDANIKLLGGDVTTESSQRDAPTVFRFKAKVTDPNLAPTKVR
                     FEAVSDSNKQMSDAVEITIPVQAPTIVRKESVAAAFNGPQFDARRAMPEVWRRGRGHF
                     TTTISTSPWLPQMSGLPVILEYPHGCFEQISTKLLGYSLLANVLTYLPDFQQRDAEYR
                     ATLERGMKQYADSVQEDGTLPYWPGGNTGNGFVTCQALWSVNESVKAGFEPPSDLQEK
                     LGGAVKKMVKGQVPASRFQKCFALFVLTQSENGDDYKNESQELYLHRNEGSDEDRVLL
                     AIALHQQNIMAHEQQQLLREIDKPIKERAFNPATFSSMTRAEAMRAFAFNAISPPTWT
                     KQRKQQARERMSKLMDDAGSLSTQENLWLLLAFTSMIGTEATPELHPAQPPAAVVSKN
                     GRSAAWVDHKMENDLVIKGLNQSALTFLMQAEYSTSEVDTDRVDRGFRIERVVKNLTD
                     ATRVGTPNTPLKLGDQLLITYRLNTRKLQNFVALEDALPAGLEVVNPNLALVGKFYQL
                     PPPDPQDRLLGLSYSEMRDRSALLYFDTVDPGSGTYSILARATAAGTFRWPATQIAPM
                     YDSRFSGLSPSSVCVVSAD"
BASE COUNT         1326 a         1592 c         1595 g         1121 t
ORIGIN      
        1 ccaggctcat ctgaccagag cgccgttggc gctaaaaaga tgccgacgca ttctcgtttc
       61 tttctcttgt gttctcgcgc ttggcttcac tgttgcagca ttcgcgcaag acgaagaaga
      121 agcatcgaat gcaaaacccg atgccggcgg cattgtgatg gagccatcga gcggaaagat
      181 tgccgaaggc gacaccatca cgatcacgtt tcccgtctcg atgatcgccg ccgatctcat
      241 cgatgttggt gatcaggcaa gcccgtttgt cagtgagccg aagctcgacg gcacgtttct
      301 gtggaaaagt cagactgaag gcgttttcac ggtgagcggc gtcgtggccg aagcgcaaca
      361 tcgactgaca ctggctccag ggttgaagga cgcgacgggc aaaccgttcg tggtgaaaga
      421 ttggagcgcc gaattcaaaa ctccgaagtt tgcgatcacg acggagttca acgagcgcaa
      481 acgattgccg gcgcgcccgc aaatctatct cgactcaact tacgcggttc gtctcgatga
      541 agcggcgcag cacatttact ttcaggaccg cgaggagcgc cagcgttttc cagtcgaagt
      601 aatccaaacg gctgaaggca aagctgcgga ttcgctggaa gcgacagggt ttcgagtcac
      661 gtcgcgcgct ccccttccag taggacacac attcgacctc atcgtgaatg gcttgctcga
      721 cgcgaaaagc cggcggccac ttccgtattt gcaagtgatg cctgccggta aaaccgaacc
      781 gctcgaggtg caatggctcg gcgcgttcaa tcatccgcta gaggaccccg tgattcgcat
      841 caaattcgac gacttcatgg atcccgtgga agtgacccca gaacgaatcc gcgtggtgcc
      901 tgcggtggag aaggtgaaac tacttgcgag cggggaccaa attgcaatca caggcgactt
      961 cgatctcaag caacactaca aagtcaccat ttcaccggag ctaaagggcg accgcggcta
     1021 cggagtccag tctgaatcgc gatggggcgc aacgtttcga ccgaaagaat catgcctgat
     1081 cttcccatca acgcaggtgt ttgcccgcgc gcgccaggaa ttgcgctttg cgttcttcca
     1141 ggtgaacacg ccacaggtca catggaaact ggcgcgcatt cccgcggaga agctgtcagc
     1201 agtcactacg cgcgtgaaag aatttgaaaa ggacgccagg gattcagtca cggggacggt
     1261 ggtaatcaat ccccgcacag gattcgcgaa agaatttcag actgaattgc tcgtcgaggc
     1321 gtttcaactg ccggtggcga gcagcggcgc cttcgaggcc accagcaacg ataccgaaac
     1381 acgacgcgat gttcgttgta cacccgccga agcctcggca aaggcgggcg ttctaccagc
     1441 aaacgaagtc ttcgccgggc cgtatctctt tgaagcaagc gcaactctgc ctgacggtcg
     1501 cgtcgttggg aatcgatcga tcatttgcgt taacgattac ctgctcacgc agaaacgaac
     1561 gccgaccaaa gtgatcatgc gtctcgcgaa aatgtcggac gcgagctcca tggccggcgt
     1621 aacaattcgc gccctcaccg acgaaaacat cgaacttgct cgcgcgatca cagacaagga
     1681 aggcatcgca gaatttccga agggaagggt tttcccgaaa tcgagggatt ctaaggcgaa
     1741 gaatacgcat ctcttcatcg ccgacaccac ggccggtccg gcgctgcaat ttgctgaagc
     1801 cacagcgtat tcctcgggga ttgattccgc tccttcaccg aatagaccgc aggctgagat
     1861 tatcaccgat cgcaatcttt atcggccggg ccataccgtg aagatgaagg ggttggcgcg
     1921 ggatgttacc gactccagcg gccttacgat ccccgtcggg acctccgtgc actggacaat
     1981 aaaagaaagc gacggcagcc gggttgttgg tgaaggagac acgacgctat cggcgtatgg
     2041 cgggtgggaa gcggagtgga atgtgccgga aaaggcaaag ctcgggagtt acgaggtgcg
     2101 gtgcgcctta ggtggtcgcg attacggagg cgtgactgtg attagcgttc aggagtaccg
     2161 cgtcccgctg ttttcggtca tggtcgaaac aacgacacca gaggtcggca ccactgcgca
     2221 tgcgcggatc gcttctgctt attttcacgg cgcaccgaac gcaggtgcgc gggtgcactg
     2281 gaaagcgagc tggacaacat tggcggactt cgtcagtgat tccgacgaac catatcgaaa
     2341 gcgtttcaac gcttactccg aggtcggtcc gcgcctcgat gttgatagtg aggacatcaa
     2401 aacaatcgag ggcgatacgc aactcgatgc gcatggtttc gcgacgatcg cctgcgaatc
     2461 gccgttcaaa gacaatcccg ccgtcggccg caccagcatt atctggcgcg cagacgttac
     2521 ttcgatcgat ggacaaaccc tcagcggcgg cgacacggcc acgcttttcg cgacagaaac
     2581 gcggcttggt gtccgcgtcg aagagcagac taccgaacct gcgggaataa aagtcgacat
     2641 cgacgcgctc gatcccgagg acgagaagaa ggacggcgtt cttgttcgcg ccgacctctt
     2701 tcacgtcacc acgaagacgg tcaaagaaca aatcgcgccg tttgtttatc gctatcgtaa
     2761 caccgaccag ttcgccaaag tcgcatccca agagtcgaaa acgccggccg aacttgtttt
     2821 cccaacaact gagaccggcc gttacgttgt tgccgtcaac gccacaaagg tcaaagcgcc
     2881 ggtggttagt gatgaaatca ctgtgaccgg tgaaaaaccg gcgcaactac cggtggtcaa
     2941 cgagaccacg ttcaagatcg atcgtcgcgc cgaaccgttt ttaccgggcg agaaagccgc
     3001 gttcacaata gaggcgccat tcggtggcgt ggcgtgggta tcagtcgaaa cggatgaggt
     3061 gctcgacacg ctactcgttc cggtaaaagg caacgccggt cggatcgaag tgcccatcaa
     3121 agaaaattat gcacccaacg cagcagtttc gatctatctg gtgaagcccg gccgcgaaaa
     3181 cgagcttccc ctcgaacgtt tcgcttacag tgagatcgat gttcgtcggc ctgaccgtga
     3241 actaaaagtt gcgccgcgtc tcgccagcaa caccgcaaaa ccgggcgatg tggtgcgcgg
     3301 tgaagtgctg gtaacgtcgc aagacaaacc ggttgccgac gccgatctgt tagtgttcgc
     3361 ggtcgacgac gccgttctta cgctgggcga ttggaaactg ccggacattg gcgctcgctt
     3421 ttatcccagg aatggcttcg cagtgcgcac ttacgaggcg ctccacggtt atatcgagag
     3481 tctcgccaaa ctcagtttga cccaaaaagg atttgtcatc ggcgacggcg gagaggaagc
     3541 gatctcgaac atcaaaaatg ttcgcaaaga atttcgcact ctcgcgtttt ggcagggcag
     3601 tttgaagact ggcgctgacg gtaaagtcgc gttcgaattc gtcgcgccag ataacctgac
     3661 cacgtatcgc atcgtggcgg tcggccagac caggatgaat caattcggcg gcgacgcgac
     3721 cgagacggta aaaatatcga aaccgctcct gatcgatctg gcgttgccgc gttttctacg
     3781 cgagggcgat gaagtcgaat tgcgtgccgt tgtccggcaa aacttcgctg aaaaggacgg
     3841 tgtcacgacg cgttgtgtga cggacgccaa cattaagcta ctaggcggcg atgtaaccac
     3901 cgagtcgtcg caacgcgacg cgccaacggt gtttcgtttc aaggcaaaag tcaccgaccc
     3961 aaatctcgcg ccgacaaagg tacgcttcga agcggtctcg gattcgaaca aacaaatgtc
     4021 cgacgcggtg gagatcacga ttccggtgca agcgccgacg attgtgcgca aggaaagcgt
     4081 ggccgctgcg ttcaatggtc cgcagttcga tgctcgccgc gcaatgcccg aagtgtggag
     4141 gcgcggccgc ggccatttca ctacaacgat ttcaacttcg ccgtggctgc cacagatgtc
     4201 cggccttccg gtgattctgg aatatccaca cggttgcttt gaacaaattt cgaccaagct
     4261 gctggggtac agtttgctcg cgaacgttct cacttacctg ccggattttc agcaacgcga
     4321 tgccgaatat cgcgccacgc tcgagcgcgg gatgaaacag tacgcagact ctgtccaaga
     4381 ggacggcacg ctcccctact ggcctggcgg caacacaggc aacggttttg tcacgtgtca
     4441 ggcgctttgg tccgtcaacg aatcggtgaa ggccggtttc gagccgccgt cggatttaca
     4501 agagaaactc ggaggcgccg taaagaaaat ggtcaaaggc caggtgccag cttcgcgatt
     4561 tcaaaaatgc ttcgcgcttt tcgtgctgac acaatctgag aacggcgacg attacaaaaa
     4621 cgagtcgcag gaattgtatc tccaccgaaa cgaaggcagc gatgaagatc gtgttttgct
     4681 cgcaatcgcg ttgcatcagc aaaacatcat ggctcacgag cagcagcaac ttcttcgcga
     4741 gatcgataag cccatcaaag aacgcgcctt taatcccgcc acgttttcat caatgacccg
     4801 cgcagaggcg atgcgcgcct tcgccttcaa cgcgatctcg ccgccgacgt ggacgaagca
     4861 gcggaaacaa caggcgcgcg aacgcatgtc gaaattgatg gacgacgccg gctccctttc
     4921 gactcaggaa aatctatggc tcctgctggc gttcacatca atgattggca cggaagcaac
     4981 gccggaactt cacccggcgc agccgccggc agccgtggtt tcaaaaaatg gccgatcggc
     5041 cgcgtgggtc gatcacaaaa tggagaatga tctcgtgatc aagggcctga atcagagcgc
     5101 gctcactttt ttaatgcagg cggaatattc caccagcgaa gttgataccg accgcgtcga
     5161 ccgcggattt cgcatcgagc gcgtcgtaaa gaatctcact gacgcaacac gcgtaggcac
     5221 tccaaacaca ccgttaaaat tgggcgatca attacttatc acgtaccggc taaatacgcg
     5281 gaagcttcag aattttgtcg cgctggagga tgccttgccg gcgggcctgg aagtggtgaa
     5341 tccgaatctt gcgctcgttg gaaaattcta ccagctgccg cctcccgatc cgcaggatcg
     5401 tttgctcgga ttgtcgtact ccgagatgcg cgatcgctcg gcccttcttt attttgacac
     5461 tgttgatccc ggctccggca cgtactcgat tctggcccgc gcaacagcag cgggcacgtt
     5521 tcgctggcca gccacgcaaa tcgcgcccat gtacgacagc cgtttctccg gcctgtcgcc
     5581 ctcaagtgta tgcgtcgtat ccgccgactg actgccctac tccggcgcaa agga
//
LOCUS       DATDAJ010000177        12014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1061873, whole genome shotgun sequence.
ACCESSION   DATDAJ010000177 DATDAJ010000000
VERSION     DATDAJ010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 12014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12014
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1061873"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VIS53_04305"
     CDS             complement(<1..941)
                     /locus_tag="VIS53_04305"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEY5767037.1"
                     /translation="MEARSVEEIPTGDEWQYEPKWDGFRCLAFRDRDKIFLQSKNGQP
                     LARYFPDVAANVAKLPQPEFVLDGELVIPIGGALSFDELQLRLHPAASRVQKLAATHP
                     AVYIVFDLLAKDGESYLKLNLRERRRLLEKFARSNLRSAKNIRLSPATSDYRVASSWF
                     RKTGRDLDGIIAKRLDAPYASGERTAAVKVKQIRTVDCVVGGFRYATGARVIGSLLLG
                     LYDDDGLLHHVGFTSAFKASQRRELTKKFEALRKPPGFTGNVPGGPSRWSTERTGEWE
                     PVAPKVVVEVAYDHFTGGRFRHGTKVLRWRPDKNPRQ"
     gene            1110..2036
                     /locus_tag="VIS53_04310"
     CDS             1110..2036
                     /locus_tag="VIS53_04310"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY5767038.1"
                     /translation="MKQPKSSGSFFANVFGLLKQTGQEFLEDKGPQLGAALAYYTVFS
                     LAPLILVLLAVVGIIFRHDPAGAWEKITQQMSYFLDASAVQVVQNIAQQASQPGKSTI
                     ATIMGVALALFGASGVFGQLQDALNTIWDVKAKPTRGIWGFLRNRFLSFAMVGGICFL
                     LLVSLTLESLLKAFSHYVQSVLPGGLVVAMSVYLIFDFAVIVFLFAMIFKFLPDAEIQ
                     WRDVWVGAVITAILFGIGKWLLGLYLGSGAAGSAYGPASSLITLLLWVYYSSQILLFG
                     AEFTQVYADRAGREVKPDEYAVRVETKEVEKR"
     gene            2201..2530
                     /locus_tag="VIS53_04315"
     CDS             2201..2530
                     /locus_tag="VIS53_04315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767039.1"
                     /translation="MKRTLISMALAIAAPFAWAQVSETTTTTTTTEGNGTITEYTPGS
                     VIVLKETSGPRTYHFGKTVTYVTRSGKVLDEDVVRTRVKVGAPVRVHYVGTGDNVMVD
                     RVILDED"
     gene            2756..2908
                     /locus_tag="VIS53_04320"
     CDS             2756..2908
                     /locus_tag="VIS53_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEY5767040.1"
                     /translation="MSTILIIILILLLIGVLPAWPHSSGWGYWPSGGLGLIVLILIIL
                     ALTGHL"
     gene            complement(2961..3107)
                     /locus_tag="VIS53_04325"
     CDS             complement(2961..3107)
                     /locus_tag="VIS53_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEY5767041.1"
                     /translation="MLWTIIVILIVLWLLGFIGHVGGSLIHLLLVIAVVVLIINLLQG
                     RRGL"
     gene            3866..4948
                     /locus_tag="VIS53_04330"
     CDS             3866..4948
                     /locus_tag="VIS53_04330"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5767042.1"
                     /translation="MRIAQVAPLIESVPPKHYGGTERIVSYLTEELVRVGHDVTLFAS
                     GDSVTNARLIASCERSLRKNERCKDPVAREVLLVDHVIEYVNEFDLIHFHTGYLHFPV
                     CRYLPVPHVTTLHGRLDLPDLVPVFDRFRTEPLISISNAQRQPLPWANWQATIYHGLP
                     KDLFVFQPNEGDYLAFLGRISPEKRVDRAIAIAKRVSMPLKIAAKVDRADRRYFKRDI
                     EPILTQSHVEWVGEISDQQKNEFLGNAYALLFPIDWPEPFGLVMIEAMACGTLVIAYD
                     CGSVPEVMEDGVTGFIVRDLDDAVEGVNRIRDLSRLRCREVFERRFAAERMASDYVDV
                     YQRLIDSDVEGTQTNPSTPPRALVNA"
     gene            5014..5643
                     /locus_tag="VIS53_04335"
     CDS             5014..5643
                     /locus_tag="VIS53_04335"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HEY5767043.1"
                     /translation="MSVPVPEKNVDLHGSAPDKHKIALLLIDVINDFDFPGADQLLRY
                     ARPMARNLVRLKRRAYKAGVPVIYVNDNFGRWKSDFRRTLDHCARYGRGRDVVKLLRP
                     EENDYFVLKPKHSGFFSSALDTLLRYLQTQTLILTGIAGNFCVLFTANDAYMRDFNLF
                     VPSDCTVSNTKRENGSALLLMKKFLKADTRPASRIVLHSSPCGDFKRHR"
     gene            6273..6797
                     /locus_tag="VIS53_04340"
     CDS             6273..6797
                     /locus_tag="VIS53_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY5767044.1"
                     /translation="MNLETLKELYVNELRDLYNAENQLIKALPKMAKGASSDELKEAF
                     EKHLEQTKGHMQRLEQVFEELGEKPKGKTCQAMKGLIEEGSDVLKADGEDSVLDAAII
                     VAAQKVEHYEIASYGSVRTFAQLLGQDKSAELLQQTLDEESEANELLNKLAEDIVNPE
                     ALMEPELASASSAR"
     gene            complement(7321..8862)
                     /locus_tag="VIS53_04345"
     CDS             complement(7321..8862)
                     /locus_tag="VIS53_04345"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5767045.1"
                     /translation="MPKKLPSSAALHETVEQFHILVDSVEEYAIYLLDPSGNVITWNT
                     GAEKIKGYSADDIIGKNFASFYTADDVAAGKPQRNLREASRRGSIRDQGLRVRKDGST
                     FEAEVVITALRDESGEIRGFSKVTRDITDQIRSREFEAEKIAAQKASKAKDDFLAALS
                     HELRTPLTPALAAATYLQDQAEKFPPEFAQDIEIIKRNVQLQARLIDDLLDLTRIARG
                     MLHLELEDCDAHKIIENALEMAKSTLAAKQFNLSTRLKAKRYHILADCIRLQQVFWNL
                     INNAVKFTSQGGQITLRTFNDKDGRFHFEIEDTGIGIEPQRLASLFQPFEQADPSVSR
                     QFGGLGLGLAISKRLIDLHHGRIEADSRGRSFGATFKVTLDAQPEGTAAAGVNHRLGG
                     KTSKPLRILLVEDHNDTRRTLSRLLTHFGHDVVTADNVEAAMARMASNNIDAVLCDIG
                     LPDGSGYEVAAKARANRGIKTIALTGFGTEQDVQRSKEAGFDFHLVKPINFQELQKIL
                     DQSGA"
     gene            complement(9101..9919)
                     /gene="surE"
                     /locus_tag="VIS53_04350"
     CDS             complement(9101..9919)
                     /gene="surE"
                     /locus_tag="VIS53_04350"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0008254 - 3'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEY5767046.1"
                     /translation="MRILISNDDGVYSPGILALAKAAKQFGEVRIVAPDVEQSSMGHA
                     ITASRPLRLKRIQLDSLHAYRVNGTPADCVALGMHRWGHVDVVLSGINLGLNLGNSCW
                     HSGTLAAAKQAALLGSRGIAFSTNVSDSREPDFATLESYVVRVFRLLLPIKTLSLVNV
                     NLPENPKGIRWTRQSVRHYDGKVVPDKDPAGRPIFWFTVTPLEGAAEGTDRWAVEHGW
                     VSITPLRLDLTDEADLARALALSDIPVARVRGKRRQRHSSSTSTSKSKSSRGQK"
     gene            9995..10921
                     /locus_tag="VIS53_04355"
     CDS             9995..10921
                     /locus_tag="VIS53_04355"
                     /inference="COORDINATES: protein motif:HMM:NF039905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEY5767047.1"
                     /translation="MRVLLIHNPKAGDRKHSKKQLMASLTRCGHQAFYQSAKIRGWKK
                     AFKKPVDLVIAAGGDGTVHKTAWPLLDSGIPLAILPLGTANNLARSLGFTGSVDEILQ
                     SLHCGKSQPFDIGVARNGSQRDWFFEAAGGGLFADYFPAAKANEKKGASPEEELNAHL
                     SLLRQLSLAYETRAWKMSVDGKDISGRYILWGAMNIRSAGPGLHLAPKAKTDDGRLDF
                     VAVREHERKDFIKHVDTHLAARKERVPLTARKFRELKITSPPGAMHLDGEPWPSTKKS
                     NGKVRGRVEITVKRAALLIWQARRRHSHYEIE"
     gene            complement(10938..>12014)
                     /locus_tag="VIS53_04360"
     CDS             complement(10938..>12014)
                     /locus_tag="VIS53_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767048.1"
                     /translation="SIRKRISSVLSNTDIAELLAQQAETETGILSRAFRRAARSAFLW
                     PEEVSDLVAQNRSLTELRGIGPFIEKQIRQWMEKPYRSKTIPAIRQDFLSLAEGLRQL
                     ATRPAWKKKLRGDLQMHTQWSDGSGTAAEMADAAANRSYEYIAITDHSKTLKIAGGID
                     ETALKRQGMEIAKVNAALSTSAPHVTVLRSIEMNLNPRGEGDMSPDSLRSLDIVLGSF
                     HSALRTTEDQTERYLAALRNPHVHILGHPRGRIYNFRIGLKADWPRVFAEAARLEKAL
                     EIDCYPDRQDLNVELLKIARDHGTHISLGTDAHHGWQLEFIDLGLAAALRAKIPADRI
                     LNFMPILELKAWAKCVHDRTMSKR"
BASE COUNT         2823 a         3150 c         3251 g         2790 t
ORIGIN      
        1 cactggcgag gatttttgtc gggacgccag cgcagaactt ttgtgccgtg ccggaatcgg
       61 ccgcccgtga agtgatcgta agcaacttcc acgaccacct ttggggcgac aggctcccat
      121 tcacccgtgc gctctgtgct ccaacggctc ggtcctccgg gcacattgcc agtgaaacca
      181 ggtggttttc taagcgcctc gaactttttt gtaagctcgc ggcgttgtga cgctttgaac
      241 gcggacgtga atccaacgtg atgcagcaaa ccgtcgtcgt cgtagagccc gagcaaaaga
      301 gaaccgatca cacgcgcgcc agtcgcgtaa cgaaatccgc ctaccacgca atcaactgtt
      361 cgaatttgtt ttaccttcac cgcggcagtg cgttctcccg atgcgtacgg agcgtcaagg
      421 cgtttagcaa tgatgccgtc aagatcgcgc cccgtttttc gaaaccaact gctcgcaacg
      481 cgataatcac tcgtagcagg ggaaagtcgt atgttctttg ctgatcgcag attcgaacgc
      541 gcgaattttt ccagaagccg cctccgctcg cgcagattca gcttcaaata tgactcgccg
      601 tctttggcga gcagatcgaa cacgatataa actgctggat gagttgcggc gagtttctga
      661 acgcgactcg cggcaggatg cagacgcaat tgcaattcat cgaacgaaag tgcgccgcca
      721 atcggaatca ccaattcgcc gtcgagaacg aactctggct gtggcagctt cgccacattg
      781 gcagcgacat ctggaaaata acgcgccagc ggctggccgt tctttgattg caagaaaatc
      841 ttgtcacgat cgcgaaacgc gaggcagcga aatccgtccc atttcggctc atactgccac
      901 tcatcgccgg tcggaatttc ttcgaccgag cgtgcttcca tcggtggtag ggacggtttc
      961 aacagcatct taaactaagt ttcgctgccc agacaaaagt ggacgcactt agcctcgccg
     1021 ctgaggggaa tcccaacaac aaaggcttaa ccaaacttct acgcaacagc caaatacacg
     1081 cctgtcagcg atctgttttg gggcgtgtca tgaaacaacc aaaatcatcg gggtcgttct
     1141 tcgccaacgt ttttggtctg ctcaagcaaa cggggcagga atttctcgag gataaagggc
     1201 cgcagttggg cgcggcgctg gcgtactaca cagttttttc acttgcgccg ctgattctcg
     1261 ttttgctcgc ggtcgtgggg atcatcttcc ggcatgatcc agcgggagcc tgggagaaga
     1321 tcacgcagca aatgagctac tttctcgacg cgagcgctgt gcaggtcgtg caaaacatcg
     1381 cgcaacaagc atcgcagccc ggtaaaagca caattgccac aatcatgggt gttgccctcg
     1441 cgcttttcgg cgcaagcggc gtgttcggtc aactgcagga cgcgttgaac acaatttggg
     1501 atgtgaaagc aaaacccact cgcggtattt ggggatttct gcggaaccga ttcctttcgt
     1561 ttgccatggt ggggggaatc tgttttctgt tactcgtctc actgacgctg gaaagcctgc
     1621 tcaaagcctt cagccactat gtgcaatccg tcttaccggg cggtcttgtg gtcgcgatga
     1681 gcgtttatct catattcgat tttgcggtca tagtttttct cttcgcgatg atatttaagt
     1741 ttctgcctga cgctgaaatt cagtggcgag acgtttgggt tggggctgtc ataaccgcga
     1801 ttcttttcgg catcggcaaa tggctactcg gtctgtatct gggcagcggc gctgccgggt
     1861 cagcttatgg accagccagt tctctaatca cactgttact gtgggtttat tattcgtcac
     1921 agattctgtt gtttggcgct gagtttactc aggtgtatgc cgatcgagca gggcgcgaag
     1981 tgaaaccgga tgaatacgcg gtgcgcgttg aaacaaaaga agtggagaaa cgttaaagca
     2041 cggtccgctt gtgtcaatcg ggtgaagaga gcggcgctct tgcatccgaa ccgaacgcgg
     2101 cgcccgatta ctgcaggaac aacggcggga cgcgtttcgt taccgaggaa agctcgttcg
     2161 cggaagtgtt tatctgccgc gtaatagaaa gaaaaaataa atgaaaagaa cattaattag
     2221 tatggccctc gcgattgcag ctccgttcgc atgggcgcag gtctcagaga caactacaac
     2281 aacgaccacc accgagggca acggaacgat caccgagtac actccgggca gcgtaatcgt
     2341 gctcaaggaa accagcgggc cgcggacata ccattttggt aagacggtca cttacgtgac
     2401 gcgaagcggt aaagtgctcg acgaagatgt cgtacggacg agagtgaaag tcggcgctcc
     2461 ggtccgggta cactacgttg gcacgggaga caacgtgatg gttgatcgag tgattctcga
     2521 cgaagattaa gaattagaga gcaaatctac caacgcgcct ttcccgtttc gccgatggcg
     2581 agtaggaagg gcgcgttatg cgtacatgtc tggcggtcag atcggatctt aggatagcct
     2641 aggcgcaatg ttggcatgtt tccttccacg cggactcttt aaacttcagc cgtcggagat
     2701 atcacaacat ccaaagtgcc tcgatgcagc gaacatactt cggaaaggaa tagccatgag
     2761 cacaattcta ataatcatat taatcctgct gctgatcggc gttttgccgg cctggcccca
     2821 tagctcgggc tggggctact ggccgagcgg aggtctcggc ttgattgttt tgattttaat
     2881 aattctcgct ttaacgggac acctgtgatc ggtgtcgcgt tcggctgacc cgcccctgca
     2941 gcaattggga gggccttggt tcagagacct cgtctgcctt ggagcaggtt aatgatcagg
     3001 acaacaacgg caatcacgag caagagatga attagactgc cgccgacgtg gccgatgaag
     3061 ccaagaagcc aaagaacgat gagaatgact attatggtcc agagcatggg atatgtcttt
     3121 ccgttaagtt tgtttgagcg ccgtatttgg gcagagtcgc gtgaaataat caagcaaaaa
     3181 cttggacatc aaggcggcgc gctgcgaatg ggggttagcc agtgacaaat cctgagcgtc
     3241 cgatgaagca aatcgaaacg ctcaacttct ttcggacgaa acgacttctc taacgttttc
     3301 aaccttctcc ttaatttcgc ttacctgcgg atgcacgtca ctaatcaaat cgtgctcggc
     3361 ccgagaaagc ttttcaatgc gggctgtcat ttcatggagc tcttccaacg tcgcattctg
     3421 acgggctgag atgcgatgca tccaccaaaa acatacgatc cagcacagcg ttccgatgca
     3481 gctaagtact aacgccaagt tttgcatata aaatttcgta gctggttctg acacctattt
     3541 tgacgttctc gcttgaatac caacgcggtt cttaactgcc tccgccaaat cgccgcgtgg
     3601 aagttcgcat gctgcataac tagactattt cgcgagcacc taacgcggcg gatgtaaatc
     3661 tgtttctcag gttgtattgc tcacgtgcgt ttaggaactc gtcactttgt agcggataca
     3721 caaaaccgaa gcatcgatcg cgtgcgaatt gtgagcgaca acacttaaat tcgtggggac
     3781 tggcagcgcc attacggcct cgggaagttg gacggctgtt agtggtgcgc cgccgaaggc
     3841 ggaacctgcg agggacaaag ggaatatgcg aattgctcaa gttgcgccac tcatcgagag
     3901 cgttcctccg aaacattacg gagggacgga acggatcgtc tcgtacctta ctgaggaact
     3961 ggttcgcgtc ggacacgacg tgactttgtt tgccagcggc gattctgtta caaatgcgcg
     4021 gcttatcgca tcgtgcgagc ggtcgctccg gaagaatgaa cgctgcaaag atcccgtggc
     4081 gcgggaagtc cttctggtag atcacgttat tgagtacgtt aatgagttcg atctgattca
     4141 ttttcacact ggataccttc attttcctgt gtgtcgctat ctgccggttc cacatgtcac
     4201 tacgttgcac ggacgcctcg accttcctga cttggttcct gtattcgacc gctttcgaac
     4261 cgagccgctt atatccatat cgaacgctca gcgacaacct ttgccctggg ctaactggca
     4321 agccaccatt taccatggct taccgaaaga cctgtttgtg tttcagccga atgaaggaga
     4381 ttacctggct ttcctgggac gaatctcgcc agaaaaaaga gtggaccggg cgatcgcaat
     4441 cgcaaaacgc gtgtcaatgc cgcttaagat cgcggcaaaa gtcgatcgcg ctgatagacg
     4501 ctatttcaag cgggacatcg aaccgatcct gacacagtct cacgtggaat gggttggcga
     4561 aatcagcgat caacagaaga acgaatttct ggggaacgcc tacgctctgc tatttcccat
     4621 tgattggccg gaaccgtttg gccttgtgat gattgaggcg atggcgtgcg gcacactcgt
     4681 catcgcttac gactgtggat ctgttcctga ggtgatggaa gacggagtaa caggtttcat
     4741 cgtacgagac ttggacgatg ccgtggaagg ggttaaccgg attcgcgatc ttagtcgatt
     4801 gcgttgcagg gaagtgtttg agagacgctt cgcggcggag cgcatggcaa gcgactatgt
     4861 cgacgtttac cagcggctga tcgatagcga tgtggaggga actcaaacca acccgtcaac
     4921 gcccccgcgt gctctcgtaa acgcataaat gaccattact gatgacctgg tgaaatatgt
     4981 gccgccaatg gcgaggaagc cacggcctca gaaatgagtg tccccgtacc ggagaaaaac
     5041 gtcgatctcc acggcagcgc gccagacaag cacaagatcg ctctgctttt gatcgatgta
     5101 atcaacgact ttgattttcc aggcgcggat caactactga ggtacgcgcg tccaatggcc
     5161 agaaatcttg tacgcttgaa gcgacgcgct tacaaagcgg gtgtcccggt aatttatgta
     5221 aatgataatt tcggccgatg gaaatctgac tttcgacgaa cgcttgacca ttgtgcacgc
     5281 tatggccgcg gccgggatgt ggtgaagtta ctgcgaccgg aagaaaatga ctactttgta
     5341 ctcaaaccaa agcattccgg atttttttcg agcgctctcg atacactgct tcgctacttg
     5401 cagactcaaa ctttgatcct taccggcatt gccgggaact tttgcgttct tttcaccgca
     5461 aacgacgcct acatgcggga ctttaacttg tttgtgccgt cggattgcac ggtttccaat
     5521 acgaagcggg agaacgggtc ggcgcttctg ctaatgaaga agttcttgaa agctgacacg
     5581 cgcccggctt ctcgtatcgt gttacattcg tcaccgtgtg gcgatttcaa aaggcatcgg
     5641 tgaaaacgcg caagccggaa atttcgaacc cagctaattg aatgctgctg gtgacaatgt
     5701 caccgggacc ttacgtgcag ccgcgcagta gaaagataag cagcaaaatg ggaattggaa
     5761 tgccgaggag ccacaataag atgtaaccgg tcgcacctgc ctgctgtatt gttttattaa
     5821 agttcataat gtgttctttc cagtaaatcg aattgggagg gcttttgcgt gtttccatgc
     5881 gagtcacaac gcctaaccag ttgctagctg agcagctctg ctcttaccag aatctaacaa
     5941 agccctcctt atccctagta acaacacgtc gagaggattc gccatcgtca gcttcccttc
     6001 caggaattca tccgagatcg aacgaaagac agctccctaa gctaaaccac tttcaactcc
     6061 taagcattaa tctgagaaac cgacggcata tttttgagta tcttttcgga atgccgatga
     6121 ccggatctgt tcggaattct ctcaagctta aaagttcaca atcaagacgc gcacttcgat
     6181 gtcttgccac gtttcctttc tgtagccggt gcaagcgtac cgcgcataca acaactcata
     6241 atcaaaccag aaacagaaag gaaaaaggga atatgaattt ggagacacta aaagaacttt
     6301 acgtaaacga actccgtgat ctgtacaatg ccgagaacca actaatcaaa gcattgccga
     6361 agatggcgaa aggcgcttca tcagacgaat taaaggaagc tttcgaaaag catctcgaac
     6421 agacgaaagg tcacatgcag agactcgagc aagtcttcga agaactcggc gagaagccaa
     6481 aaggcaaaac gtgccaggcc atgaaagggt tgatcgaaga gggatcggac gtgcttaagg
     6541 cagatggcga ggattccgtg ctcgacgccg cgatcattgt ggctgcgcaa aaggtcgagc
     6601 actacgagat cgccagctac ggcagtgtgc gcacatttgc gcaattgctt ggacaggaca
     6661 aatccgcgga gctccttcaa caaactttgg acgaggaatc tgaggcaaac gagcttctga
     6721 ataagctggc cgaagacatc gtgaatcccg aggctctgat ggagccggaa ctggcgtctg
     6781 cgtcttcagc ccggtagcta ttcacaagtt tcgcaacgta attagggtgc attgcttgca
     6841 gctcgtgccg cttcgcaacg ctgggcgcaa gcaatgcatc cgcgccgcgg cgggcagagg
     6901 actgcccgcc ctacccattt ttttttggcg tcggcgatga acgcgtactg aaagggtgct
     6961 tttcgttgcg ctcgtgaggc tccttatcga atggcgcata agccgtcccg ataaaagcga
     7021 aggcgaaagc cattgtcctc cgcaaaccgc gcgacgtttg gttttcgctg atttccgtcg
     7081 ggccagatgc agctgagttc ttcctcgtaa aacagcgcaa tgtttcgccg tcttcagctc
     7141 gcgcctaatc tgtcgcaaca gtcttcgcat ctcccaattc cacaaacagt tccaaaggtt
     7201 acttacaatt ccgaaaagca ttgggtaacc gggtcgtact taggtactaa caagcgtcgg
     7261 cagcgacgga tgggatcggt atccgcatag cgtcgttcgt gaagtagctg ctgggttaag
     7321 ctacgcgcct gactggtcga gaatcttttg cagctcttgg aagttaatgg gcttgaccag
     7381 atgaaaatcg aatccggctt ctttagagcg ttgcacatct tgctcagttc cgaacccggt
     7441 gagcgcgatt gtcttgattc ccctgtttgc ccgggctttt gcggccacct cgtaaccact
     7501 tccatcgggg aggccgatgt cgcacaagac cgcatcgatg ttgttcgagg ccatcctggc
     7561 catggcggct tccacattat ctgcagttac aacgtcgtga ccaaaatgag taagcagacg
     7621 cgacaatgta cgccgggtat cgttgtgatc ttccacaagc agtatacgca gcggtttgga
     7681 tgtcttgccg ccgaggcgat ggttaacgcc ggccgctgca gttccctctg gctgagcgtc
     7741 cagcgtaacc ttgaacgtcg caccgaaact tcggccacgg ctatccgctt caattctgcc
     7801 gtgatggaga tcgatgagac gtttggaaat cgcgagtccg agaccaagtc ccccaaactg
     7861 ccggcttaca gaaggatcag cctgttcaaa tggctgaaac aaagaagcca gccgctgcgg
     7921 ctcaattcca atccctgtgt cttcaatttc gaaatgaaaa cgtccatctt tgtcgttaaa
     7981 cgtgcggagc gtgatctgtc cgccttgcga ggtgaacttc accgcgttgt tgatcaagtt
     8041 ccagaacacc tgctgaagcc ggatgcagtc agccaggatg tgatagcgtt tcgccttaag
     8101 cctggttgag agattgaact gcttcgccgc gagcgtcgac tttgccatct cgagcgcgtt
     8161 ttcgataatt ttgtgcgcgt cgcaatcttc cagttccaga tgaagcatgc cgcgagcaat
     8221 ccgggtgaga tcgagcaggt cgtcaatcaa tcgggcctgc agttgcacat tgcgttttat
     8281 gatctcgata tcttgggcga actctggcgg aaatttctcc gcttgatctt ggaggtacgt
     8341 ggctgctgcc aaagcagggg tcagtggcgt gcgcagctca tggctgagcg ctgccagaaa
     8401 atcgtccttc gccttacttg ctttttgcgc tgcaattttt tccgcttcaa actcccggct
     8461 gcgtatttgg tcggtgatgt cgcgggtgac tttggagaaa ccgcgaattt ccccggattc
     8521 atcacgaagg gcagtaatga cgacctccgc ttcgaaagtt gatccgtctt ttcggacccg
     8581 cagaccctga tcacgaatgg atccgcgacg actcgcttcg cgcagattgc gctgcggttt
     8641 gccggcggca acgtcatctg ctgtatagaa cgaggcgaag tttttcccga tgatgtcgtc
     8701 cgctgagtaa cctttgattt tttccgcgcc tgtgttccag gtgatcacgt tcccgctggg
     8761 atccagcagg taaatggcgt attcctcgac gctatccacc agaatgtgga attgttcgac
     8821 ggtctcgtgc agtgcggcgc tgctgggcaa cttcttaggc atcggctgcg acggcaagtc
     8881 tcgaatacga ttcgaagttt tcctctgatg tggttccctc cgcacagaaa taatttattg
     8941 gagaagtagc tccgcaagca agtagcagct tgtagtcacc caacgcgttg gaacccaacc
     9001 ctgtagccac gccccgatgg ggcgtccaat ctgaaccggg ccacaggccg gtggctacag
     9061 gtttgtgggc tgctgcgaga gtcttcctct tccgctttct ctacttctgt cctctggaag
     9121 atttagattt agacgtagag gtagaggaag agtgtcgttg acggcgtttg ccgcggaccc
     9181 tcgcaaccgg gatatctgaa agagccaggg cgcgagcaag gtccgcctca tccgtgagat
     9241 cgagacgcaa cggagtaatc gatacccaac cgtgctcgac tgcccagcga tccgtccctt
     9301 ccgcagcgcc ttcaagcggg gtaactgtga accaaaaaat cggccgaccg gccgggtctt
     9361 tgtcgggaac aactttgccg tcgtaatgcc gcacagactg ccgcgtccaa cggatgccct
     9421 tcgggttctc cggcagattc acgttgacca gcgaaagcgt tttgatcggc aacagcaacc
     9481 tgaacacacg cacaacgtag gactcaagcg ttgcgaaatc cggttcacga ctgtcgctca
     9541 catttgtgct gaacgcgatg ccgcgtgacc ctagcaatgc tgcctgcttc gctgcagcga
     9601 gcgtgccgga atgccaacac gagttgccca ggttcaaacc aagattgatt cccgacagaa
     9661 cgacatcaac atgcccccag cgatgcatgc cgagcgcaac gcaatcggcc ggcgtgccgt
     9721 tgacgcggta cgcgtgcaag ctgtcaagct gaatacgttt aaggcgcagt ggtcgcgatg
     9781 ccgtgatcgc atgtcccatt gaagattgct ccacatcggg agcgacgatg cgcacctctc
     9841 cgaactgctt tgctgctttc gccaacgcca ggatccctgg actgtaaaca ccatcatcgt
     9901 ttgagatcag aatccgcatc ttcacaaaca aaacccgtat gcgaatggtt ttggccgatt
     9961 aggtggtaag aatgattcaa gtaatgagca aatcatgcga gttctgttga ttcataaccc
    10021 caaagcggga gaccgtaaac atagcaaaaa acaattgatg gcgagcctga ccaggtgcgg
    10081 gcatcaggcg ttctatcaat cggcaaagat ccgcggctgg aaaaaggcgt tcaaaaagcc
    10141 agtggatctc gtcatcgcag ccggaggcga cggcacggtg cacaaaactg cgtggccact
    10201 cctggacagc gggattccgc tggcgatttt gccgcttggc acggcgaaca atctggcgcg
    10261 cagcctcggt ttcaccggat ctgttgacga aattcttcaa tcgcttcact gcggaaaaag
    10321 ccagccgttc gacatcggcg tggcgcgcaa tggatcgcag agagattggt ttttcgaagc
    10381 tgctggcggc ggcctgttcg ctgactactt tcccgctgca aaggcgaacg agaaaaaagg
    10441 tgcttcgccg gaggaagaat tgaatgcgca cctatcgctt ctgcgtcagt tgtcgctcgc
    10501 ttatgagacg cgcgcgtgga agatgagcgt cgatggaaaa gatatttccg gtcgctacat
    10561 cctttgggga gcgatgaata tccgttcggc tggcccgggt ctacatctcg ctccaaaagc
    10621 aaaaacggac gatgggcggc tggactttgt cgcggtgcgc gaacacgagc ggaaggactt
    10681 cattaagcat gtcgatacgc acctggccgc acgaaaggag cgggtcccct taacggcgcg
    10741 caaatttcgc gagctcaaaa ttacgtcgcc gcctggtgca atgcatcttg atggcgaacc
    10801 gtggccgagc acgaagaaga gcaatggaaa agtccgcggc agagttgaaa tcacggtgaa
    10861 acgggccgcg cttctgattt ggcaggctcg acgacgacac agtcactacg agatagaatg
    10921 acgccgttcc caaaagttca tcttttggac atagtgcgat cgtgtacgca tttagcccaa
    10981 gcctttaact caaggatggg catgaagttg aggatgcggt cggcgggaat ttttgcgcgt
    11041 agtgccgcgg ccagccccag atcaataaac tctagctgcc agccgtgatg agcatctgtg
    11101 ccgagcgaaa tgtgcgttcc gtgatcgcgc gcaattttga gtagctcaac gttcaagtcc
    11161 tgccggtccg gataacagtc aatttccagc gccttttcga gccgggcagc ttctgcaaag
    11221 acacgcggcc aatctgcctt caacccgatc cgaaagttgt aaatacgacc tcgcgggtga
    11281 ccaaggatgt gaacgtgtgg attgcgcaac gctgcgaggt aacgctcggt ttgatcttcg
    11341 gtagtacgta aagccgaatg gaacgagccg agaacaatat ccagagatcg cagcgagtcg
    11401 ggcgacatgt cgccttcgcc gcgcgggttc agattcattt cgatcgagcg aaggacagtc
    11461 acgtgcggag ccgatgttga aagtgcagca ttaacttttg ctatctccat tccctggcgt
    11521 ttcaacgcgg tctcgtcgat tccacccgcg atcttcaacg ttttggagtg atcggtaatg
    11581 gcgatgtact cgtaggaacg gttcgcagcg gcatcggcca tttccgcggc cgtgccggat
    11641 ccgtcgctcc attgagtgtg catctgtaaa tcaccgcgca gcttcttttt ccaggcaggt
    11701 cgcgtcgcga gttggcgtag tccctcagcg agcgagagaa aatcctgacg aattgcgggt
    11761 atcgttttcg agcggtatgg cttttccatc cactgccgaa tttgtttctc gataaacggg
    11821 ccgatgccgc gcagctctgt caatgaccga ttctgcgcga caagatccga tacttcctcc
    11881 ggccacaaaa acgcgctgcg cgcggctcga cgaaacgcgc gcgaaagaat gcctgtctca
    11941 gtttctgcct gctgagcaag caactccgca atgtcagtgt tcgatagcac acttgagatt
    12001 cgtttccgga tgga
//
LOCUS       DATDAJ010000178         6329 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1067359, whole genome shotgun sequence.
ACCESSION   DATDAJ010000178 DATDAJ010000000
VERSION     DATDAJ010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6329
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1067359"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..534
                     /locus_tag="VIS53_04365"
     CDS             118..534
                     /locus_tag="VIS53_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767049.1"
                     /translation="MKQPFGIRILSWFAALASAGMFVSIALAILDIGPHLMGGEKVTR
                     SEWLHIAAPLVAVIGCLMAAIAYALATRKAWSRHLVLAIFALIIVYASALGTLNVLRH
                     TIMWRAIVNASLFGCASAWYFYFKATVAEYFRKLGG"
     gene            621..1223
                     /locus_tag="VIS53_04370"
     CDS             621..1223
                     /locus_tag="VIS53_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767050.1"
                     /translation="MTTRTLFFVFAFLLVVSLAHAGDERSINNLAKALTGLSSDVDPA
                     EAQALSYTAHTTARRLKKEYRVVLNPEFTVFLYNVGKRKRGWCGHWAQDIGEELIKLA
                     PKTLVLHWGEAYPDTTSENNALVVTARNQPFKDGIIIDGWRRAGRLFWCPVIKDHEYE
                     MEQHYGHSGITMWKENMKWSAWLQSYQTAEENPETASASR"
     gene            1292..2167
                     /locus_tag="VIS53_04375"
     CDS             1292..2167
                     /locus_tag="VIS53_04375"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEY5767051.1"
                     /translation="MHILKVQDANVQTERAEEYKPPTEETAWSRIKKALGPVVVVGVV
                     IAKFLAKLKFVLPVLLKSGGTMLLMVWVYMQLWGWQFALGFVLLLLVHETGHLIVAKK
                     FGLKVGAPVFIPFMGAFIALKEAPRNAWMEACVGIGGPLLGSLGALVCNALGEFFAAP
                     IFIALAWFGYFLNLFNLTPVGMLDGGRIVTALSRWLWLPGFALLIWFGWKYPNFIIWL
                     IILMSVPRVYSLFRKRTEEEQRYFEVTPSQRWIMSVLYFGLITVLLFGMHVAQQDLNK
                     YGVRSHGHGRDVIVQ"
     gene            complement(2168..3832)
                     /locus_tag="VIS53_04380"
     CDS             complement(2168..3832)
                     /locus_tag="VIS53_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767052.1"
                     /translation="MNRKDFFAELKRRKVYSVAVTYAVVAWLLIQVVTQVFPPFEVPN
                     WAERLVIIAIVLGFPIALAFAWIYDITSHGIVRTREAQRERTEKTVEPSHSTDRSIAV
                     LPFTDLSPDQDHAYFSDGVAEEILTALAKVDGLRVAARRSSFWFRGKEAELPEIAQRL
                     NVDHVLEGSIRRDGNLVRVAAELIDARNGFTIWSETYEREMHGIFAVQDEITCSIVDA
                     LKLKLEISPPPRSGSTDAYDLYLQGLFLSDKSTEEGLRASLEFFGRALDKDPRFARAW
                     TGIAKSWLWLADGYVEPLEAYSKVREAAVNAINIDDGEAEAHVYLAETKRILDWDLRG
                     AEAEYLRAFEIDSNSTTSNYFIAAFYAAIGEREKALTYLGRTAKIDPASLWVSNFACE
                     IYRYFGLIDEAMAAGERSLQLDPTFLYSEPLVAALYREMGRFDDAIALYKKSQDLSGR
                     VPFGLAITYAKMNRREEAREILEAVCASRGSYTPGDAIAHVYVVLNEHEDAMRELERA
                     YEEHSSSLHFIGIAPEFAPLRSDKRFVSIVERIGLKPQKVFAVTAA"
     gene            complement(3922..>6329)
                     /locus_tag="VIS53_04385"
     CDS             complement(3922..>6329)
                     /locus_tag="VIS53_04385"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767053.1"
                     /translation="NQERQSDYRLDVLFMDLVAYSTQLLDEQRQYQEQLNEIVRGTEQ
                     VRSAKEAGKLIRLPAGDGMALVFFDSPEAPVRCAIEISKKLKENPQLKLRMGIHSGPI
                     DEVRDVNDRINVAGAGINLARRVMDWGDAGHILLSKRVAEDLSHSRQWGHYLHDLGEC
                     AGKHGVPIFLVNFYGDGIGNPELPKAIRQARLDQAAKAAATGAPRTFRRVYLAIAATV
                     VSIGVIGLCLWFYWRQNQASLLPEEKSIAVLPFENFSPAKDNAFFADGMQDDILTSLA
                     KIKDLRVISRSSVMAFRDAAGQNLRDIGRKLAVANILEGSVRKEGDRVVVNVQLINTR
                     NNRQIWANRYDRTLVDSLGLQGELASEIADTLRATLSDDEKAQAAAKPTQNADAYVFY
                     LRANQISRNPDTLLEDYKTAEQLYMQAIELDPNFALAHARLASVCAEVFRYYEPTDSW
                     RTKAFAEAETALRLQPNLAEGHFALGQCIYWMDKDYDRALEQFEIASRLSPSNADTRR
                     LIAAIQRRRGKWQEALEAYERVAKLDPQNPSTARELMYTNSSMRRWPEAVRWAEQMRA
                     LAPSSLVAKIQNGYAHFQWKGDTRLLKLMLEEIPAGVDPDGSVTATRWDVAMLQRDYS
                     AARRILETSSANETSYSIAGLTPKIFLEGCTYVALGDNANAQKAFEQARPAFEAAVKE
                     APESAERHASLGWLYALMGRKNDAIAEGRRAVELKPESKDAVDGSLMNGYLALIYARV
                     GENDLAIPLIERLLTTPGAVDSTDYSITGNDLKHRWEWDPLRNDPHFQRLIENDAPSQ
                     LNH"
BASE COUNT         1354 a         1774 c         1688 g         1513 t
ORIGIN      
        1 actggcgcgg gcacaattcg ccgcaaggac tagccgtgtg ccggaaggga cgttcgccgc
       61 agcgaacgct ctcaggcttg gcacaagcgc ctctacaaca catcttccac ggttcaaatg
      121 aagcaacctt tcggcattcg aatcttgagc tggttcgcgg cgctcgcgtc cgcaggaatg
      181 tttgtttcga tcgcgctcgc gattctcgac atcgggccgc accttatggg cggcgagaaa
      241 gtgactcgct cggaatggtt gcacatcgcc gccccgctcg tcgccgtgat cggctgcctg
      301 atggctgcga tcgcgtacgc gcttgccacc cgcaaagcgt ggtcgcgcca tctcgtgctg
      361 gcgatatttg cgctgataat cgtgtatgcg tccgcgctcg gcacactcaa tgtgcttcgg
      421 cacacgatta tgtggcgtgc catcgttaac gcctctttgt ttggttgtgc gagtgcgtgg
      481 tatttctact tcaaagcaac cgtagcagag tatttccgaa aacttggagg gtgatacatt
      541 cgggcatgcg aggatatttc ttggtgtttc ctattgcact gttgaaaccg gagtgcgaaa
      601 tgcaggcctg aggagataaa atgacaacgc gcacattgtt tttcgttttc gcattcctgc
      661 ttgtggtcag tttggcgcat gccggtgacg aaagatcaat caacaacctg gccaaagctc
      721 tcacagggct ttcgtcggac gtcgatccag ctgaagccca ggcattgtct tacactgcgc
      781 atacgactgc ccgccgactt aaaaaagaat accgtgtcgt tcttaacccg gagtttactg
      841 tgtttctcta caatgtcggc aagcgaaagc gcggctggtg tgggcattgg gcccaggaca
      901 ttggagaaga gttaataaaa ctcgcgccga aaaccctcgt gctccactgg ggtgaagcgt
      961 accctgacac aacgagcgaa aacaatgcac tggtcgtgac tgcgcgtaac cagcctttca
     1021 aagatgggat catcatcgac ggctggcgca gggccggtcg attattctgg tgtccggtga
     1081 taaaggacca cgagtacgaa atggaacaac attacggcca ttccggcatt accatgtgga
     1141 aagaaaacat gaaatggagc gcctggctgc aatcttacca aacggccgaa gagaacccgg
     1201 aaacagccag cgcgtctcgc tgaaacattc gactgcaaat tcgtcggacg cagagcgctg
     1261 ccactgaaag ttggcgtttc acattaacgc catgcacatt cttaaagtgc aagacgcgaa
     1321 tgttcagacc gaaagggccg aggagtacaa gccgccaact gaagagacgg cttggagccg
     1381 gataaaaaag gcgctgggcc ctgtcgtggt cgtgggcgtc gtgatcgcaa aatttcttgc
     1441 gaaactcaaa ttcgtcctgc ccgtcctgtt gaaatccggc ggcaccatgc tgctgatggt
     1501 ctgggtttac atgcagctgt ggggatggca gttcgcgctg ggttttgtcc tgctcttgct
     1561 cgtccatgaa acgggccatt tgattgtcgc caaaaaattt ggactcaagg tcggcgcgcc
     1621 tgtctttatt ccgtttatgg gcgccttcat tgcgctcaag gaagcgccgc gaaatgcgtg
     1681 gatggaagcg tgcgtaggca tcggtggacc gttgctcgga agcttgggtg cattggtctg
     1741 caacgcgttg ggcgagttct ttgccgctcc gattttcatc gcgctggcat ggttcggata
     1801 ttttctaaat ctgtttaacc tcacaccggt cggaatgctc gatggcggac gcatcgtgac
     1861 agcgttgtcc cgctggttat ggttgcccgg gtttgcattg ctcatctggt ttggatggaa
     1921 atatccaaac ttcattatct ggctcattat ccttatgtcg gtgccgaggg tctattcgct
     1981 cttccgtaaa aggaccgaag aagaacagcg ctatttcgaa gtcacaccgt cgcagcgttg
     2041 gataatgtca gtgttatact ttgggttgat tacggttttg cttttcggca tgcacgtggc
     2101 gcagcaggat ttaaacaaat acggcgtccg ctcccacggc cacggtcgcg acgttatcgt
     2161 tcaatagtca ggccgctgtt actgcaaaaa ccttttgagg tttcagccca attctttcga
     2221 cgatcgagac gaaacgtttg tccgaacgca ggggcgcgaa ttcgggagcg atgccgatga
     2281 agtgcaatga cgaggaatgt tcctcgtatg cacgttccaa ttcgcgcatg gcgtcctcgt
     2341 gttcgttcaa gaccacatac acgtgcgcga tggcgtctcc gggcgtgtaa ctcccgcgac
     2401 tcgcgcaaac ggcctcgaga atctccctcg cttcctcccg gcggttcatc ttcgcgtagg
     2461 taatcgcaag accaaagggc actcgaccac tgaggtcttg cgactttttg tataacgcga
     2521 tggcgtcatc gaagcgtccc atttcccggt aaagggcggc caccagcggt tcactataaa
     2581 gaaacgtcgg atcaagctgc aacgagcgct cgccagcggc catcgcttca tcgatcaatc
     2641 cgaagtatcg gtagatctcg caggcgaaat tgctgaccca gagggaggca ggatcaattt
     2701 tcgcagtgcg gcctagatac gtaagagctt tctcgcgttc gccgatcgcg gcgtagaatg
     2761 cagcgatgaa ataattcgag gttgtagaat ttgaatcgat ttcaaacgcg cggaggtatt
     2821 cggcctcggc gccgcgcagg tcccaatcga ggatccgttt ggtttccgct aagtaaacat
     2881 gcgcctcggc ttcgccgtcg tcgatgttga tcgcatttac ggcagcctcg cgaaccttcg
     2941 aatatgcttc gagtggttcg acgtagccat cggccagcca gagccacgac tttgcaatgc
     3001 cggtccaggc gcgtgcgaat cgcggatctt tatcgagtgc acgcccgaag aactccagac
     3061 tcgcccgcag cccttcctca gtgcttttgt cggacaggaa caagccctgc aaatacaggt
     3121 cgtaggcatc tgtgctgcca gaccgcggcg gaggtgagat ttcgagcttg agtttcagcg
     3181 catctacgat cgaacacgtg atctcatctt gtacggcgaa aatgccatgc atttcgcgct
     3241 cgtacgtctc cgaccagatc gtgaacccgt ttcgggcatc aatcagctcg gcagcgactc
     3301 ggacaagatt gccgtcacgc cgaatgcttc cctccagtac gtgatccaca ttgagcctct
     3361 gtgcaatctc cggcagttcg gcctcttttc ccctgaacca aaacgaagag cgccgtgccg
     3421 ccactcgcag gccgtccact tttgccagcg ctgtcagtat ctcttcggca actccgtcgc
     3481 tgaaatacgc atgatcctga tcgggactta gatcggtgaa cggcagcacc gcgattgatc
     3541 tatcggtgga atgcgaaggt tccaccgttt tttccgtccg ctcccgctga gcctctcgtg
     3601 tccggacgat cccatggctc gtgatgtcat aaatccacgc aaacgccaac gcgatcggga
     3661 accccagcac aatggcgatt atcacaagtc gctcggccca attgggtact tcaaacgggg
     3721 gaaacacctg cgtcacgact tgaatcagta gccacgccac gactgcgtac gtgactgcga
     3781 cgctataaac ttttcttcgc ttcagttccg caaaaaagtc tttccggttc acgggtcgat
     3841 caggcttggc agcaagcctc ctatttgctt ctcggttggc aacgggaact ttgagatctg
     3901 ctcgaacctt agttggattc gttagtgatt gagctgcgac ggcgcatcgt tctcaatcag
     3961 cctttgaaaa tgcggatcgt tgcgaagcgg atcccattcc cagcgatgtt tcagatcgtt
     4021 gccggtgatg ctgtaatcgg tgctatcaac tgcccctggc gttgtgagca gacgctcgat
     4081 caacggaatg gccaagtcat tttcgccgac ccgagcgtag atgagggcga gatagccatt
     4141 catgagtgaa ccatcgacag catctttcga ttccggttta agctcaactg ctcgtcgtcc
     4201 ctccgcgatg gcatcgttct tccgccccat caacgcgtaa agccagccga ggctcgcatg
     4261 tcgctcggcg ctttccgggg cttctttcac ggccgcttca aaagctggtc ttgcctgttc
     4321 gaacgctttt tgagcattcg cattatctcc cagagccaca tacgtgcagc cttccaggaa
     4381 gattttcggc gtcaatccgg cgatgctgta agaagtttcg ttggccgacg atgtttccag
     4441 aatccttctg gccgcagaat aatcgcgttg caacatcgcg acgtcccacc gggttgcggt
     4501 aacactgccg tctggatcaa caccggctgg aatctcttcc agcatcaact tcagcagacg
     4561 agtgtctcct ttccattgaa aatgggcgta gccgttttgg attttggcca cgagcgatga
     4621 tggagccaag gcgcgcattt gctcggccca gcgcaccgct tccggccatc gccgcattga
     4681 cgagttcgta tacataagtt cgcgagcagt gctcggattt tgcggatcga gcttcgcaac
     4741 ccgttcgtag gcttcaagcg cctcctgcca tttcccacgc cggcgctgaa tcgccgcgat
     4801 cagccggcgt gtatccgcat tactcggcga taaacgggac gcgatctcaa attgctccag
     4861 agcccggtcg tagtctttat ccatccagta aatgcactgg ccgagcgcga agtggccttc
     4921 cgcaagattc ggttgcagtc gaagcgcagt ttccgcttca gcgaaggctt tcgttctcca
     4981 actgtcggtc ggttcatagt aacggaacac ttcagcacaa acggatgcga gccgcgcgtg
     5041 agcgagcgcg aaattcggat caagttcgat tgcctgcatg taaagctgct cagcggtctt
     5101 ataatcctcc agcagcgtgt cgggattgcg ggaaatctgg ttcgcgcgga gatagaaaac
     5161 gtacgcatcg gcgttttgcg tcggcttcgc tgctgcctgg gctttctcat catcgctaag
     5221 cgttgcgcga agcgtatcgg caatttcgct ggccaattct ccctgcaagc cgagcgaatc
     5281 aaccagagtg cggtcgtaac gatttgccca aatctggcga ttatttcgcg tattgattaa
     5341 ctgcacattc accaccactc ggtcgccttc cttgcgcacg ctgccctcca gaatgttcgc
     5401 cacggcaagt tttctaccga tgtcgcgcag gttctggcct gccgcgtcgc gaaaggccat
     5461 taccgaggaa cgactgatca ctctgaggtc cttgatcttt gccaaactcg ttaggatgtc
     5521 atcctgcatg ccgtccgcga aaaacgcgtt gtcttttgcc gggctgaagt tctcgaacgg
     5581 caacaccgcg atgcttttct cttcaggtag caacgatgcc tgattttgcc tccaataaaa
     5641 ccagaggcac agaccgatga caccgatcga aacgactgtg gctgcgattg ccagataaac
     5701 acgtcgaaac gtccgaggag cgccggtagc cgcagcctta gccgcctggt ctaatcgggc
     5761 ttgccgaatc gctttcggta gttcgggatt tccgataccg tctccgtaga aattaaccag
     5821 gaagatggga acgccgtgct ttccggcgca ttctcccaag tcatgcaaat agtgacccca
     5881 ttgtcgcgag tgcgaaagat cctcggccac tcttttagac aacaggatat ggcccgcatc
     5941 tccccaatcc atcactcgcc gggcaagatt gattcccgcg cctgcaacgt ttattcggtc
     6001 atttacgtcg cgaacttcat caattggccc gctgtgaata cccatccgaa gcttcagttg
     6061 cggattttcc ttcaactttt tgctgatctc gatcgcacac cgcaccggtg cttcgggact
     6121 gtcaaagaac acgagtgcca tcccgtcgcc ggcgggaagt cgaattagct tccccgcttc
     6181 ttttgcactg cggacctgct cggtaccacg gacaatttca ttcagctgtt cctgatattg
     6241 gcgctgctcg tcgagaagct gcgtagaata agcgaccaaa tccataaaca gaacgtccaa
     6301 tctgtaatcg gactgacgtt cctgattca
//
LOCUS       DATDAJ010000179         4758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1068103, whole genome shotgun sequence.
ACCESSION   DATDAJ010000179 DATDAJ010000000
VERSION     DATDAJ010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1068103"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..480)
                     /locus_tag="VIS53_04390"
     CDS             complement(<1..480)
                     /locus_tag="VIS53_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767054.1"
                     /translation="MTRGLIALAVLIVMGLVKLPVERDLAALHRQEHFRGVEFNLDLR
                     EKLGQLGFIAALSGFRAIVADGLFIQAHAAWENTQWGRMLLLFRQITTLQPRVLLFWD
                     TAAWHMAWNASVAAMNDTNQPRQALRVKAQREYFALGKDFLERGIKNNPDRPELYEAL
                     "
     gene            complement(477..1412)
                     /locus_tag="VIS53_04395"
     CDS             complement(477..1412)
                     /locus_tag="VIS53_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767055.1"
                     /translation="MTDGEATSALQPFKASTIPKRHRAFSLSRILAITSNTLTELTRL
                     KVFYVLLVFGLLLIGSSIFMAQFSFQQEFQILKDVSLGAISMFTSLLAIVATSRMLPR
                     DIDDRTVYTILAKPVPRFEYVVGKIAGVLLLLAISTLIMVAAFLAVLYMREQAVLQAT
                     AKQMASAPPDQLADALRAVRASAFNVDLVPGIIIIFLKACLLTALTLFVSTFATSTIF
                     TIVVMVFIYFIGHLEATAREYWLAVQGGGLVTRVSLAIVALLFPDLQAFNLVDDIVAG
                     TVISMAVFTKTALLGIFYTVIYTLLAVFVFYGKEL"
     gene            complement(1431..2330)
                     /locus_tag="VIS53_04400"
     CDS             complement(1431..2330)
                     /locus_tag="VIS53_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767056.1"
                     /translation="MTNPSSLSNGEASAAVAVHGLTKIFPVPFHPTRGVVAVKDLSLR
                     IEPGEVYGLLGPNGSGKSTTLKIILGLVSPTRGRTEIFGRDSRLVESREAVGFLPENP
                     YFYKYLSGAETLRFFGRLCGMSGATLKSRVNELLDLVGLNKARDRRLGTYSKGMLQRI
                     GLAQALIHDPRLVVLDEPTAGVDPAGSREIRDLIMDLKRRGITVLLSSHLLAQAQEIC
                     DRIGILADGVMVREGRLQELIAIENQTELVIADASDDLMQEIESFISRSNAKLLERRK
                     STTTLERLFLESTGGNDKISTRE"
     gene            complement(2323..2601)
                     /locus_tag="VIS53_04405"
     CDS             complement(2323..2601)
                     /locus_tag="VIS53_04405"
                     /inference="COORDINATES: protein motif:HMM:NF012911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEY5767057.1"
                     /translation="MMISLQVFYEGRVQGVGFRFTVRHIAKGFDVTGWVRNLPDGRVE
                     LQVTGDEEEVRAFLDGVAQSELHSLIREQIENKLNEPIAARGFEIRHD"
     gene            complement(2630..3064)
                     /locus_tag="VIS53_04410"
     CDS             complement(2630..3064)
                     /locus_tag="VIS53_04410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767058.1"
                     /translation="MKYCLSSLLLILALGASVVLRADTDAEVSARKDALELAGAFGND
                     GFKIRDGHSCGALKAHDHALIAVNLYAGNQYWFSVGTAEPLKKVAVSLYDEAGNQMTT
                     ENFSDGDKAAAGFAPENSGQYFVSVDSVEDQEGSFCLVYSYK"
     gene            complement(3061..3873)
                     /locus_tag="VIS53_04415"
     CDS             complement(3061..3873)
                     /locus_tag="VIS53_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767059.1"
                     /translation="MIRLVGLSMLALVAAIPAAVAEEGQHLSSDQMAKAVKSDSMTVP
                     TPGELFAALGKSGKINWSAQYRAPIPMTYGNRPQIALNLGGLIADGFIAVEAKDGQQV
                     KNIGSDIMKLGKALGVSEQLLSRGNSINEFAEHNEWDTLQEELEATQNEVKTSMQSHA
                     DQDLVILVTLGGWIRGTQVVTGAIVKNYNESAAKVLREPALVHFIQAKLNAISPELRQ
                     EPLVKDVSEQLTAIEKLVSFPEGKAPTAEDVKKLNEAVAKLMTKIESKESPK"
     gene            4016..>4758
                     /gene="eno"
                     /locus_tag="VIS53_04420"
     CDS             4016..>4758
                     /gene="eno"
                     /locus_tag="VIS53_04420"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000103948.1"
                     /note="catalyzes the formation of phosphoenolpyruvate from
                     2-phospho-D-glycerate in glycolysis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY5767060.1"
                     /translation="MPSSSIIHIHAREILDSRGNPTIEADVQVESGALGRAAVPSGAS
                     TGEHEALELRDGDKSRFGGKSVRKAVANVNHKIAPILKGLDARDQANIDKKLIELDGT
                     PTKRNLGANAILTVSLAVARAASAAENLPLFRYLGGHEARVLPVPMMNILNGGAHSDA
                     PIDFQEFMVVPRGAPSFSEALRYGTEVYHALKSVLKARNLSTAIGDEGGFAPQLDSAE
                     DALESISAAVEKAGYKLGEQIFIALDPAAS"
BASE COUNT         1105 a         1326 c         1258 g         1069 t
ORIGIN      
        1 aagcgcttcg tacagctccg gacggtcagg attattttta attccgcgct cgagaaaatc
       61 tttgccgagc gcgaaatatt cgcgctgcgc tttgactcgc agtgcctggc gcggctggtt
      121 ggtatcgttc atcgccgcta cgctcgcgtt ccacgccatg tgccacgcgg ctgtgtccca
      181 aaacagaagc acccgtggtt ggagcgtcgt gatttgtcga aataacaaaa gcattcggcc
      241 ccactgagta ttttcccaag ccgcatgcgc ctggatgaac agaccatcgg ccacaatggc
      301 tcgaaacccg ctcagtgcgg cgatgaatcc gagttgcccg agtttttcgc gaagatcgag
      361 attgaattcg acgccgcgga aatgttcctg acggtgaaga gctgcgagat cgcgttcgac
      421 tggcaattta actagcccca tcacgatcaa taccgccagc gcgatcaggc ctcgcgtcat
      481 aattctttgc cgtaaaacac aaaaaccgcc aataacgtgt agatcacggt gtagaaaatg
      541 ccgagtaacg ccgtcttggt gaacactgcc atcgagatca cggtgccagc gacgatgtca
      601 tccaccagat tgaaagcctg cagatcagga aagagcagcg ccacgatcgc aagagacacg
      661 cgtgtgacta aaccgccgcc ctgtacggcg agccaatact cacgcgcagt agcttccaag
      721 tgtccgataa aataaataaa aaccatcacc acgatggtga agatcgttga ggtggcgaag
      781 gtagaaacaa acagagtcag ggccgtgagc aggcacgctt tgaggaaaat aataatgatt
      841 ccgggaacaa gatcgacgtt gaacgcggac gcgcgaaccg cgcgcagagc atcggcgagc
      901 tggtccggcg gcgcgctggc catttgtttc gcggtagcct gcagcaccgc ctgctcgcgc
      961 atgtacagca cggccaggaa cgccgcgacc attatcaggg tactaatcgc cagtaacaaa
     1021 agaactccgg cgattttgcc gacaacgtat tcgaaacgcg gcaccggttt ggcgagaatg
     1081 gtatagacgg tgcggtcgtc gatatcgcgc ggcagcattc gcgacgtggc tacgattgcc
     1141 aatagcgaag tgaacattga gatcgcgcct aacgagacgt ccttcagtat ttggaattcc
     1201 tgttggaaag agaattgcgc catgaaaatc gagctgccaa tcaacagcag cccgaacacg
     1261 agcagcacgt aaaaaacctt caggcgcgtt agctcagtca acgtgttgct cgtgatcgcg
     1321 agaatgcgcg acagagagaa agcgcggtga cgcttcggaa tcgttgaagc cttaaatggt
     1381 tgaagggctg aagtagcttc gccgtctgtc atttgtgttt tgttagttcg tcactcgcga
     1441 gttgagattt tgtcattccc tccggtcgat tccaggaata atctttccag cgtggtggtc
     1501 gattttcgcc gctcgagcaa tttcgcgttc gaccggctga tgaacgattc aatctcttgc
     1561 atcaggtcgt ctgaggcatc ggcgatcaca agctcggttt gattttcgat tgcgattaat
     1621 tcctgcaaac gcccttcgcg taccatcact ccgtcggcaa gaatcccgat gcggtcgcaa
     1681 atttcctgag cttgcgcaag caaatgtgac gaaagcaaaa cggtgattcc gcgacgcttg
     1741 aggtccatga tcaaatcccg aatctcgcgc gagccggccg gatcaacacc agccgtcggt
     1801 tcatccagga ccaccaaccg cggatcatga atcaaggctt gggctaaccc gatgcgttgc
     1861 agcattccct tggaatacgt gcccaatcgg cggtcgcgcg ccttgtttag cccaacaaga
     1921 tcgagaagtt cgtttacacg gctcttcaat gttgcccctg acattccgca aaggcgtcca
     1981 aaaaaacgca gcgtttccgc gccgctgaga tatttgtaga aatacgggtt ctcggggaga
     2041 aaaccaactg cttcgcggct ctcgactagg cgactgtctc gtccaaaaat ttcggtgcgg
     2101 cctcgggttg gcgataccag gccgagaata attttcagcg tggtgctctt gccggagccg
     2161 ttcggcccca gcaagccgta cacttcgcca ggttcgatgc ggaggctgag gtcttttacc
     2221 gcgaccacgc cacgagtggg atgaaacgga acaggaaaaa ttttagtcag tccgtgaacg
     2281 gcgacggccg cactcgcctc cccgttgctg aggcttgacg gattagtcat ggcgaatctc
     2341 aaagccgcgc gcagcgattg gttcgttcaa cttattctca atttgttcgc gaataagcga
     2401 gtgaagttcg ctttgagcga ccccatcgag aaatgcgcgt acctcctcct catcaccggt
     2461 aacctgaagt tctacgcgac cgtccggcag attgcgcacc caaccggtca cgtcgaagcc
     2521 tttggcgatg tgacgcacag tgaagcggaa cccgacgccc tggacgcgac cttcgtaaaa
     2581 cacctgaagc gagatcatca tctgctccaa gatagaaccc aggcatcgtc tatttatacg
     2641 aatagacgag acagaaactg ccttcctgat cctcaacgga atcgacggat acaaaatact
     2701 ggccgctgtt ctccggcgcg aagcccgccg cggctttgtc cccgtcgctg aaattttccg
     2761 tggtcatttg gtttccagct tcatcataaa ggctgacggc aacttttttt agcggctccg
     2821 ccgtgcccac agaaaaccaa tattgatttc ccgcataaag gttcaccgcg atcagggcat
     2881 gatcgtgcgc cttaagcgca ccgcacgaat gtccgtctcg aatcttgaac ccgtcatttc
     2941 caaatgctcc cgcaagctcg agtgcgtctt tgcgcgcact cacttcagcg tctgtgtctg
     3001 cgcggagaac aacgcttgcg cctagcgcta aaatcaaaag caaagacgac aggcaatatt
     3061 tcattttggc gactccttgc tctctatttt tgtcatcagc ttggccaccg cctcattgag
     3121 ttttttcaca tcttccgcgg tcggcgcctt tccttccgga aatgaaacga gtttttcaat
     3181 cgccgtcagt tgttcgctta cgtctttgac cagcggttcc tgacgtaatt caggcgagat
     3241 tgcattcagc tttgcctgga tgaagtggac caatgccggt tcgcgcagaa ccttcgcggc
     3301 ggactcgtta taatttttca caatcgcgcc ggtgaccacc tgcgttccgc gaatccaccc
     3361 gccaagagta acaaggataa ccagatcctg atcggcatgc gattgcattg aggttttgac
     3421 ctcgttttgc gtcgcttcca attcctcctg gagcgtgtcc cattcattgt gctcggcaaa
     3481 ttcattgatg ctgttgcccc gactaagcag ttgctcgctc actcccagcg cctttccgag
     3541 cttcatgatg tccgagccga tattcttcac ctgctgaccg tccttcgctt ccacggcgat
     3601 gaatccatcg gctatcaaac cgccgaggtt gagggcaatc tgcggacgat tgccgtacgt
     3661 cataggaatt ggcgcgcgat attgagctga ccagtttatt tttcccgatt ttccgagggc
     3721 agcgaatagc tcgcccggcg tggggacagt catcgaatcg ctttttacag cttttgccat
     3781 ttgatccgac gacagatgtt gcccttcttc ggctaccgct gcggggatag cagcaaccaa
     3841 ggcaagcatg gataggccaa ccaaacgaat catcgcgaag attatgcgtg ccttagcgaa
     3901 attgccaatc ggaatctctc acgcctccaa tcggttcctc ccggccttgt ttatgcattt
     3961 ggccggtacg gatttgcccc gtgacgccaa agctgttcta attcgtacag gacttatgcc
     4021 aagcagcagt attattcaca ttcacgcccg cgaaattttg gattcacgcg gcaatcccac
     4081 gatcgaagca gatgttcagg tcgaaagcgg cgcacttgga cgagcagcgg ttcccagcgg
     4141 ggcgagcacg ggcgaacatg aagcattgga attgcgcgac ggcgacaaaa gccggttcgg
     4201 cggaaaaagc gtaagaaaag cggttgcgaa tgttaaccac aagattgcac cgatcctgaa
     4261 aggactggac gcacgagacc aggcgaacat cgacaagaaa ctgatcgaac ttgatggcac
     4321 accgaccaaa agaaatctcg gcgccaatgc gattttgact gtttctctgg cggtcgcccg
     4381 tgcggcgtcg gctgctgaaa acctgccgct gttccgatat ctcggcggac atgaagcacg
     4441 ggtgctcccg gtgccgatga tgaacatcct gaacggtggc gcgcactcgg atgcgccgat
     4501 cgattttcag gaattcatgg ttgtgccccg cggtgcgccg agtttctcgg aagcattgcg
     4561 ttacggcacg gaagtgtatc acgcgctcaa atctgttctg aaagcgcgca atctttccac
     4621 ggccattggc gacgaaggcg gatttgcgcc gcagctcgat tccgcggaag acgcgttgga
     4681 atcgatttcc gcggccgtcg agaaggctgg ttacaagctg ggcgaacaga tcttcatcgc
     4741 gctggatccc gctgcgtc
//
LOCUS       DATDAJ010000180         4833 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1072870, whole genome shotgun sequence.
ACCESSION   DATDAJ010000180 DATDAJ010000000
VERSION     DATDAJ010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4833
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072870"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..1058)
                     /locus_tag="VIS53_04425"
     CDS             complement(246..1058)
                     /locus_tag="VIS53_04425"
                     /inference="COORDINATES: protein motif:HMM:NF013328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HEY5767061.1"
                     /translation="MPELPEVETFKRYLDSTSLHQRITGVEVRDAYVLKRVSPRELAR
                     RLKGRRFENSSRHGKHLFVRAGHEVWLRLHFGMTGWLQYLKRDEETPTTARVLFRFAN
                     NHRLAFDDQRKFGEVELIKNVDEFLQRRGIGPDALNVGRSEFKTMFRKHRGAVKAILL
                     NQQLIAGIGNLYADEILFRAGMHPATAAVSLSDKDLKRLFRATRHVLERAIALKTDFN
                     RLPKSWLLPHRGKRGRCPRCGRALKSATIGGRTSWFCAHCQKRAHSKVTPAT"
     gene            complement(1231..1683)
                     /locus_tag="VIS53_04430"
     CDS             complement(1231..1683)
                     /locus_tag="VIS53_04430"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5767062.1"
                     /translation="MKHAKDIMSANPACCTPEHNVQQAAELMVKHDCGEIPVVESDGN
                     MKPIGVITDRDIACRVVAMGKNPNQTRVRDAMSRPPVTITPDASLEECCRIMEESQIR
                     RVPVVDQSGICCGIVSQADIAKAASTQQTAEVVKQVSEPSQHASRVAA"
     gene            1789..2175
                     /locus_tag="VIS53_04435"
     CDS             1789..2175
                     /locus_tag="VIS53_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767063.1"
                     /translation="MGIDSLEQFLRLLKKSPSGGVFNPWWQVDEQNDIGPSAPAIRRQ
                     QLRAYLRERVGSAKLAVIGEAVGYRGGHFSGIPMTSERLLLRGGKNVQLAASKIFSGV
                     KPRRTSKPSVCPNGFSEPTATIVWGA"
     gene            2191..2472
                     /locus_tag="VIS53_04440"
     CDS             2191..2472
                     /locus_tag="VIS53_04440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767064.1"
                     /translation="MPDEFVLWNAFPWHSFDPQRGLLSNRMPNKAEQLSGRPVLKAFL
                     ELFPCEQIVALGKIAAAQLKQLDLNAHCVRHPASGGAKRFRQQIARIVR"
     gene            complement(2486..3271)
                     /locus_tag="VIS53_04445"
     CDS             complement(2486..3271)
                     /locus_tag="VIS53_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEY5767065.1"
                     /translation="MELLEALPRLISWAIPVIVLAVIILPQAIRILREYERGVIFRLG
                     KLLGAKGPGIIFLIPIVDRMVRMDLRVVTISVERQEVMTRDNVPVTVDAVVYFRVVDP
                     QAAVVKVENFLKATSLMSQTTLRSVLGQAPLDDLLSQRESINQKLQEIIDRQTEPWGI
                     KVTAVEVKDVALPDTMKRAMAKQAEAERERRAKIVNAEGEFQAAEKMVQAAAMMSKEP
                     IALQLRFLQTMREISSEHNTTTFFPLPIDLLTALIKKSEPPKS"
     gene            complement(3281..4372)
                     /gene="mqnC"
                     /locus_tag="VIS53_04450"
     CDS             complement(3281..4372)
                     /gene="mqnC"
                     /locus_tag="VIS53_04450"
                     /EC_number="1.21.98.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic dehypoxanthinyl futalosine synthase"
                     /protein_id="HEY5767066.1"
                     /translation="MVSLNRDALTEKILEGARISTDDALELYRSPLEELAALANARRD
                     LAKAKSYGGRGREIVTYIIDRNINYTNVCNVYCKFCAFYRTEKDEDHYVLSFEQLDQK
                     LDELTAAGGVQILMQGGHHPKLAFQWYIDLLQHIRAKYPHINIHGFSPPEFQHFAETF
                     RMPLREVISEFKTAGLGSIPGGGGEILVDRVRKRISPLKINSDEWLEVMQVAHELGLK
                     SSATMMFGHVETIEDRVEHLQRIRDQQDRSGGFTAFICWTFQPQHTVLKVKQPTGVSE
                     YLRMQALARIFLDNIDNIQSSWVTQGPDIGQIALRYGANDFGSVMMEENVVSSAGTTF
                     RLDAAQIESLIHGAGYEPRRRNNWYELLN"
     gene            4456..>4833
                     /locus_tag="VIS53_04455"
     CDS             4456..>4833
                     /locus_tag="VIS53_04455"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5767067.1"
                     /translation="MTRRKKFADGSAIRPYHLEMERNVAIVGAGVSGLTCGVVFAEHG
                     YRTAIFAKEIGQQTTSSVAAAVWFPYHVEPAERVIPLALETYQVLLDLVRVPESGVSI
                     IESRQFLRTGRIEIPDWAIPLGAS"
BASE COUNT          962 a         1377 c         1343 g         1151 t
ORIGIN      
        1 aagctggctg cgaccgccga gcgcagcgaa aatgttttcc ccgttctgct cgaagcagcc
       61 gaagtctgtt cgttaggcca gatcaccggc cgcttgcagg aagtggtcgg ccgttttcgg
      121 ccgatggtgt gaaacatcaa atgctgtagt gtgcgctgtc ctcagcgcac ttaatgccga
      181 aggcgcggcg ccgaagaatg cactcacact gctagaaatg ttgcgctgag agtcgacagt
      241 cgcggttatg tggccggcgt aactttggaa tgcgctcgct tctggcaatg cgcgcaaaac
      301 catgaagtgc ggccgccgat cgtcgctgat ttcaacgcgc gaccgcaacg cggacatctg
      361 ccgcgttttc cacgatgcgg aagcagccac gatttcggca aacgattgaa atcggttttc
      421 aacgcaattg ctctttccag aacatggcgc gttgcgcgaa acaacctctt cagatccttg
      481 tcacttaaac tgaccgctgc agtggccggg tgcatgcccg cacggaaaag aatttcgtcg
      541 gcgtaaaggt tgccgatccc ggcgatcaac tgctggttga gcaaaatcgc tttcacggct
      601 ccgcggtgtt ttcggaacat cgttttgaac tcggagcgac cgacattgag cgcgtccgga
      661 ccgatgccgc gtctttgcaa aaactcatcc acattcttga tcaactcgac ctcgccaaat
      721 tttcgttgat cgtcgaacgc gagccggtgg ttgttggcga atctaaaaag gacgcgcgca
      781 gtggtcggcg tttcttcgtc gcgcttgagg tactgaagcc agccggtcat gccgaaatgc
      841 agccgtaacc acacctcatg accggcgcgc acgaacaaat gtttgccgtg ccggctactg
      901 ttttcgaagc ggcgcccttt cagtcgccgt gccagctcac gcggggaaac acgtttcaaa
      961 acatacgcgt cccgcacctc gacaccggtg atccgctgat gcaatgacgt gctgtccaaa
     1021 tatcgtttga acgtttcgac ttcgggcagc tctggcatcg ggaggcgtaa tctaggcatc
     1081 ctgcctccga cgagtgaggc aggcaaacat tgtccgtcag tggcggtctc ccctctccgt
     1141 cgtagccgtg gcggaaccgg gcagtccgcg gctgccgatc aggagattac tcctccggat
     1201 cgtttcgcac acaggattgt gtgggtcacc tcaagccgcc acgcgggagg cgtgctgact
     1261 gggttcggac acttgcttta ctacttcggc tgtttgctgg gtggatgcgg ctttcgcgat
     1321 gtctgcctgt gacacgatgc cacagcaaat tccgctttga tccacaacgg gtacgcgcct
     1381 gatttggctt tcttccataa ttcggcagca ctcctcgagg ctagcgtcag gcgtgatcgt
     1441 cacaggcggt ctcgacatcg cgtcgcgcac tctggtttgg ttcgggtttt ttcccatagc
     1501 gacgacacgg caagcgatgt cgcgatcggt gatcacgcca atcggtttca tgttcccgtc
     1561 gctctcgact acgggaatct cgccacagtc gtgcttgacc atcaactcgg ctgcttgctg
     1621 cacattatgc tcgggcgtgc agcaagcggg attggcgctc ataatgtctt tggcatgttt
     1681 catggcattt gctccttgga attgcggttg ttgctgattg gttctattaa ggtttcgaat
     1741 ttcggccatc tgtagcgtgt aacgtgagtc cctggcgcgt agtccatcgt gggcattgat
     1801 tcactcgagc aatttctaag gctgctaaaa aagtcgccat ccggtggggt gtttaatccc
     1861 tggtggcaag tcgatgagca aaacgacatt ggtccgagtg ctccagccat ccggcgccaa
     1921 caattacgtg cttatctgcg agaacgtgtc ggaagcgcga aactcgcggt gatcggggaa
     1981 gcagttggct accgcggcgg tcatttcagc ggaattccca tgacctctga acgcttgctg
     2041 ctcagaggag gcaagaacgt tcagttagca gccagcaaga ttttctccgg cgttaagcca
     2101 cgccgcacaa gcaaaccgag tgtttgtccg aatggttttt cggaaccgac ggcgacgatt
     2161 gtctggggcg cgtagctaaa gatcggcgta gtgccggacg agttcgtctt gtggaatgcg
     2221 tttccgtggc actcattcga tccgcagcgc gggttgttga gcaatcgtat gcctaacaaa
     2281 gcggagcaac tttccggtcg ccccgtgctg aaggctttcc tcgaattatt tccttgcgag
     2341 caaatcgtcg cgctgggaaa aatcgccgcc gcacagctta agcaacttga tttaaatgcg
     2401 cactgcgttc gccatccagc atccggcggt gccaaacgtt ttcgccagca aatcgccagg
     2461 atcgtccgct aattcgactg acaaattacg atttcggcgg ttcgctcttt ttgatcaatg
     2521 ccgtcaaaag atcgatcgga agggggaaaa aggtcgtggt attatgttcg ctggaaattt
     2581 cgcgcatcgt ttgcaggaaa cgcagttgca gcgcaatcgg ttccttgctc atcatcgccg
     2641 cggcctgcac cattttttcc gctgcctgaa attcgccctc ggcgttgacg atcttcgcgc
     2701 ggcgttcccg ctcggcttcg gcctgcttcg ccatcgcgcg tttcatggta tcgggcagcg
     2761 ccacatcctt gacctcgacc gccgtgactt tgattcccca gggttcggtt tgccggtcga
     2821 tgatctcctg caacttctgg ttgatcgact cgcgttgcga aagcaggtca tccaaggggg
     2881 cctggccgag cacgctgcgc aacgtcgtct gcgacatcag cgaggtggct ttgagaaagt
     2941 tctccacttt caccacggcg gcctgcggat cgaccacgcg gaaatacaca accgcgtcga
     3001 ccgtcaccgg cacgttgtca cgcgtcatca cctcctgtcg ctcgacgctg atggtcacga
     3061 cgcgcaaatc cattcgcacc atccgatcaa cgatcgggat aaggaaaatt atgcccggac
     3121 ctttcgcgcc gagtaatttc ccgagacgaa agatcacgcc gcgctcgtat tcccgcagga
     3181 tccggattgc ctgcggaaga atgattacgg cgaggacgat gacggggatg gcccaactga
     3241 tcagtcgcgg caatgcttcg agtaattcca tggttgtctc ctagttcaat agttcgtacc
     3301 agttatttcg ccgacgcggt tcgtagcctg cgccgtggat gagcgactcg atttgcgctg
     3361 catccagccg aaaggttgtc ccggcgctgc taacgacatt ttcttccatc atcaccgagc
     3421 cgaaatcgtt cgcgccatat ctgagcgcga tctggccaat gtccgggcct tgcgtgaccc
     3481 aggagctttg gatgttgtcg atgttgtcca ggaaaatccg tgccaacgct tgcattcgca
     3541 gatattcgga cacgccggtg ggctgcttca ctttcaacac cgtatgctgc ggttgaaagg
     3601 tccagcaaat gaacgcggtg aagccgccac tgcgatcctg ttgatcgcga atccgctgca
     3661 aatgttcgac ccgatcttcg atcgtctcca cgtgaccgaa catcatcgtg gcgctcgatt
     3721 tcaatccgag ctcatgcgcc acctgcatca cctccagcca ttcgtcgctg ttgattttca
     3781 aaggcgatat tctttttcgc acccggtcca cgaggatttc gccgccgccg cccgggatcg
     3841 agccgagccc ggccgtctta aattccgaga tcacttctcg cagcggcatc cggaacgtct
     3901 ccgcgaaatg ctgaaactcc ggcggactga atccatggat gttgatatgc ggatattttg
     3961 cgcggatgtg ctgcagaaga tcaatgtacc attggaacgc caatttcgga tgatgcccgc
     4021 cctgcatcag gatttgcact cctcctgcag cagtgagttc gtcgagtttt tgatccagct
     4081 gctcgaagct cagcacgtaa tgatcttcgt ctttctctgt ccgataaaac gcgcagaact
     4141 tgcagtagac gttgcagacg ttcgtgtaat tgatgttgcg atcaatgatg taggtcacga
     4201 tctcgcggcc gcggccgccg tagctttttg cctttgccag atcgcgccgc gcattcgcaa
     4261 gcgccgccaa ttcttccagc ggcgaccgat acagttccag cgcatcatct gttgagatgc
     4321 gcgcgccctc caggattttc tccgtgaggg catctcggtt aagtgaaacc atgtcgcggc
     4381 aattgtagac gctgccaggc aatttcgcac gtaccttgat cgtggtagag cgcgaccgcc
     4441 gggcgcgccg tggtcatgac gcgtcgcaaa aaatttgcgg acggctcggc gatccgtccc
     4501 taccatttgg aaatggagcg aaacgtcgca atcgtaggcg cgggcgtatc gggacttacc
     4561 tgtggtgtag tttttgctga gcacggttac cgcacggcga tctttgcgaa agagattggt
     4621 cagcaaacaa cctccagtgt ggctgcggcg gtttggtttc cctaccatgt cgagccagcg
     4681 gaaagagtga tcccgttggc gctcgaaacc taccaggtgc tcctcgatct cgtccgggtt
     4741 cccgagagcg gtgtatcgat catcgaatcg cggcagttct tgcgcaccgg tcgaattgaa
     4801 attccagatt gggccattcc gcttggcgct tct
//
LOCUS       DATDAJ010000181         2332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1080963, whole genome shotgun sequence.
ACCESSION   DATDAJ010000181 DATDAJ010000000
VERSION     DATDAJ010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080963"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(777..986)
                     /locus_tag="VIS53_04460"
     CDS             complement(777..986)
                     /locus_tag="VIS53_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767068.1"
                     /translation="MNLLNLPDGRIINLEHLTYAERAGEYLALHFDSGAEGGMGSVVR
                     LKQGEGARRVWTYLASKCTVKIEAA"
     gene            complement(1270..2136)
                     /locus_tag="VIS53_04465"
     CDS             complement(1270..2136)
                     /locus_tag="VIS53_04465"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HEY5767069.1"
                     /translation="MHTKTIGLIAHTGKRGVAELINSIAQEFERFSISILFEKETARV
                     AGKERGYPIAELGAMTDLLVVAGGDGSILRVIGQLGETIKPIFGINVGSLGFLTCASS
                     SNYREAVECIAKDRINFSRRALLEVRVILGDKRTNKMLALNDAVLSRGELSRLVMLRT
                     RVNGESLTEFNADGLIVATPTGSTAYSLSAGGPILDPESGVFVITPICPHVLTNRSII
                     VADGSMIEIEASHPDYPVYLTLDGRRPIHVERGSLVTIRKARKTLPLASLPDASFFSV
                     VRQKLKWSGSNV"
     gene            complement(2112..>2332)
                     /locus_tag="VIS53_04470"
     CDS             complement(2112..>2332)
                     /locus_tag="VIS53_04470"
                     /inference="COORDINATES: protein motif:HMM:NF013856.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY5767070.1"
                     /translation="ILALIKPQFELQRSEVGKGGIVRDPRLHQKAQDKIVAFVNDLRH
                     VISGIAPAAIKGADGNQEFFACIRKRSA"
BASE COUNT          569 a          640 c          608 g          515 t
ORIGIN      
        1 cgagacgcga aaatacctca cttctctgcc attagaaaca catcgttttc gggtcgttcg
       61 ttagatttgc cgacttccta gcaatcagca ttgacacaaa agctactttc taactacaat
      121 tccgcgcgcg gaggtttacg cgaatcgtat gcagacactc gcgaaccaag ttgcaaacaa
      181 atccagcgcg aagtagcagc cggcctaacc ttgcatgaca aacagagaca caactaaata
      241 aacgacccgc aaaggagaat taacaaacat gcagggcaag gaaaagaaaa ccaagaaaag
      301 ggtcaaaatt gatgacctca agccagcaaa agatcccaag gggggtacgt cccggggtcc
      361 tccccacgac cttaagtggc ttttgagaca tctccaactg ggtcaggatc ccggccagac
      421 cgattccaaa cgaaaatcgg cttcctgaaa aatttctgaa aaaactatat gtcatgtgaa
      481 atcggtacgt gtcggttccg attcgtgaaa ttgacaaaaa gagcgcggtc agagtttttg
      541 cccgtgcccg cgctggttat gaaaattgag ctatcctcac ccgaagcagc ccgggtgcga
      601 tactggttag tgccccttat ttttgttaat gcttatttcc gcgtaaacgg taatcggaac
      661 caacaccaaa tcgtccgcgt cggtgctgat tgctgcaagc gcggcaacgc caatcatttc
      721 gtgcggatga gccctaaatc gagtggcgag aatcgttggg caacgatcgc ttggaactaa
      781 gccgcctcga tcttcacggt gcatttgctg gcgaggtatg tccatactcg ccttgcgcct
      841 tcaccttgtt ttagcctaac gacagagccc atcccgcctt cagcgccgct atcaaaatgc
      901 aaagccaggt actcgcccgc gcgttctgcg tacgtgagat gttcgaggtt tatgatccgc
      961 ccatccggca agttcaacag gttcatgagc aatgctgatt atcaggtttc gaggggctgc
     1021 acaagaactc ggtaggctga cttctgacct tcagtgcgtc atcggatggt cgaattctgg
     1081 ccgttagcgg gaagaatatg cgcggattgc cggtaggggc ggttcacccg aatcgccctc
     1141 gcgaatgtga gcatgtaatg aaacaggcga ttgaggtcaa tcgcccctac ctacgcgatc
     1201 taggttcgcg accccgaggg cgcgctcacc aggtcgccgt ggcgaaccgc tcccaagagg
     1261 cgaggccaat cagacgttgc tcccgctcca cttaagcttt tgccggacta cgctgaagaa
     1321 tgaagcatcc ggcaaggacg ccagtggaag cgtttttctt gctttgcgga tggtgacgag
     1381 cgacccgcgc tcaacgtgga tgggtctgcg gccgtccaga gtcaggtaca ctggataatc
     1441 gggatgactc gcttcgattt cgatcatcga tccatccgcg acaatgatcg aacggttcgt
     1501 gagaacgtga ggacaaatcg gcgtgatgac gaacacgccg gactcagggt cgagaatcgg
     1561 tcctccggcc gatagcgaat acgctgtgga tcctgtcggc gtcgcgacaa ttaagccgtc
     1621 ggcgttgaac tccgtgagcg attcgccgtt gacccgcgtg cgcaacatca ccaggcgcga
     1681 aagttcgccg cgactcagga cggcgtcgtt tagagcgagc atcttgttcg ttctcttgtc
     1741 accaagaata accctgactt cgagcaacgc acggcgactg aagttaattc gatcctttgc
     1801 gatgcactcg acagcttcgc gataattcga cgaactcgcg caagtcagga aaccaagcga
     1861 gccgacattg atgccgaaga ttggtttgat ggtctcgccg agttgaccga taacgcgcag
     1921 aattgagccg tcgccgccag cgacgaccaa cagatcggtc atagctccga gctccgctat
     1981 tggatagccc cgttcttttc cagcaacacg cgcggtttcc ttttcgaaca gaatcgaaat
     2041 tgagaatcgc tcgaattcct gggcaatcga attgatcaac tccgcaacgc cgcgctttcc
     2101 ggtgtgcgct attaagccga tcgttttcgt atgcatgcaa agaattcctg attgccatcc
     2161 gcgcctttga tggcagccgg tgcgatccca gagataacgt gccttagatc gttcacaaaa
     2221 gcgacgatct tgtcttgtgc cttctggtgc aagcgaggat cgcgcacaat tccgcccttt
     2281 ccgacctccg accgttgcag ctcgaattgc ggtttgataa gcgccagaat ca
//
LOCUS       DATDAJ010000182         6926 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1084086, whole genome shotgun sequence.
ACCESSION   DATDAJ010000182 DATDAJ010000000
VERSION     DATDAJ010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6926
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1084086"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIS53_04475"
     CDS             complement(<1..204)
                     /locus_tag="VIS53_04475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767071.1"
                     /translation="MDAARTRSTVLGALSAGLLVIVFSLILLWHNPLVFWNDDYELSV
                     LPVFADMARSWSEGHWPLLSPYSW"
     gene            complement(272..769)
                     /locus_tag="VIS53_04480"
     CDS             complement(272..769)
                     /locus_tag="VIS53_04480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5767072.1"
                     /translation="MKRKTPNAERPTLNIEWPGVREDEGVYVLKTATPNFHRPTSNAQ
                     SASKSRFDLEGRMLDFSARIIQLVDALPNTRAANHVAGQLLRCGTSPYGNHGEVEAAE
                     SRKDFIHKLKVCLKELKETRRWLRLIAKSSMLPTPKMTAILKETEELIKIFFSSVRTT
                     ERNAK"
     gene            complement(766..1731)
                     /locus_tag="VIS53_04485"
     CDS             complement(766..1731)
                     /locus_tag="VIS53_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5767073.1"
                     /translation="MPIRFPKKKRRNIVRQSPDGDTPVPAGRHSTRVRLRPRSDWHKR
                     NFLTSVLIPSLFVKRSGDYVPPQFPKIREGEICITWIGHASFLIQTHEVNILIDPIWS
                     KWLKVIKRLKRPGFEIHHLPSIDFVLVTHAHFDHLDRRTLRRVAANQPLVVPTGVGNL
                     VHDLGFHIVHELDYWQTVELGPLKISLTPCHHWGARFLADLHRDFGGFVIASNGRTIF
                     HCGDTAYFPGFKEIGDRFSVDLALLPIGAYEAPTGREVHMNPEEAVRAFLELRAKKLI
                     PMHYGTFPLGFEPLHEPPQRLLAAARAHGLEKNVLVMTEGKPVVL"
     gene            1883..2770
                     /locus_tag="VIS53_04490"
     CDS             1883..2770
                     /locus_tag="VIS53_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HEY5767074.1"
                     /translation="MRSWRVCVTLFFICSAGIASESRLPFGTVFKGQEQFNRLVAKAK
                     AENWKSLPIGDRTAAVGKALVGTRYKHFTLEIDNRIESPSVNFYGMDCWTFFETALGF
                     ARMLNEPESNWTPERLLHYIEMDRYRGGQCTGDYLSRLHYLEDWLYDNDRRGLVNDMT
                     RQLGGRSVPHSAREMSVGWRHYRYLASNRSLLGPLARMEANVSSRPLYEIPKSEVAKI
                     EPKLSSGDVIGVISRERNGLRSTAHVGLALRTSDGVLHFMHASSPRNYGKVVVDDQLS
                     KYLYRYGSDSGILVARPLR"
     gene            2836..3798
                     /locus_tag="VIS53_04495"
     CDS             2836..3798
                     /locus_tag="VIS53_04495"
                     /inference="COORDINATES: protein motif:HMM:TIGR01728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY5767075.1"
                     /translation="MKRAKFLASISLCFATTAYCLGETKIRVGHFPNITHAQGVVAHA
                     LSRQGKGWFEQRLGSDVKIEWFIYNAGPSAMEAIFAKSIDLTYVGPGPALNAYNKSNG
                     QEVRLIAGAANGGAGLVVQPDANLKAPADFRGKKIATPQLGNTQDISCRAWLTEGGLK
                     ITQLGGDAQVIPTQNPDQLSLFKAKKIDGVWTVEPWLSRLEQEASGKVIVEEKDSPTT
                     VLVSSAKFLNQQRELVKKFANAHAELTEWITKNPEEAQRLIKAELLAETKSDMNPQLI
                     DAAWKRIVFTAVTPRAAVEKFVQNSVKAGFIKTAPDLSKLFENP"
     gene            3798..4610
                     /locus_tag="VIS53_04500"
     CDS             3798..4610
                     /locus_tag="VIS53_04500"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767076.1"
                     /translation="MSLQEELRGPPPAKLVVDHVSKWFQQKRQNVHALDDVSLEVAEG
                     EFIVMVGPSGCGKSTLLDIIAGLEKPDKGRVLADNQPVLRPGRHRLVMFQESALFPWL
                     NVFGNVMFGLKLKPGLRNRERREVAKFFLHLVGLEKFMESNVHELSGGMKQRVALARA
                     LAPNPRVLLMDEPFAALDAMTREQLYGDIQQIWQKRRKTIIFVTHNVREAACLADRVV
                     IMTPTPGRIRDIFEIKLPRPRDFNSIEIARHASQLTGALKGYLAPEPVVSVE"
     gene            4607..5374
                     /locus_tag="VIS53_04505"
     CDS             4607..5374
                     /locus_tag="VIS53_04505"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5767077.1"
                     /translation="MRRALLAILFFIALLAIWVALVHAEIWSPVLLPSPRNVSEYLVN
                     AARDGTLVSASGVTLRRLIVGYFIGLAIGLPLGLLTASLKFAEDTVGVLALGLQTLPS
                     VCWVPLALLWFGQTEGAMLFVVIMGTIWSVVIATDTGVRTISPIYARAARTMGSGPFH
                     RWIRVILPASLPHLISGMKQGWAFAWRSLMAAEIYVTILTGFGLGHLLHYGRELSAMD
                     QVIGIMLVIVVIGLLADKILFSPWERFLHRRWGTGRT"
     gene            complement(5394..6353)
                     /locus_tag="VIS53_04510"
     CDS             complement(5394..6353)
                     /locus_tag="VIS53_04510"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEY5767078.1"
                     /translation="MAVEITSESLAGGQTEAAADYKESQLTTVSEFPSSSQRSLRSRF
                     RLTNPTWTRRNFSSRARELSGGDAIILSIPKSGRTWLRAFFCAYFCRRFGLEFTLRPG
                     RYALPGFPRIVFSHDLFEHRTKGDRWDRIRGKYLVPRRELNRAKIILLARDPRDCFVS
                     LYLQLTRRDPNAPVDLRQKTVSEMLRDEKLGVRAIVNAMNNWLNEFSHRDNFTLVRYE
                     ALRGSPAEHFRDLLAVLGEPSPDANIFREALEFSRFENMQKLEAAGAFDSNILHPGDV
                     RDPESFKVRRGKVGGYREYLSAEDQQFAEAALTELDRRFGYTA"
     gene            6425..6783
                     /gene="ssrA"
                     /locus_tag="VIS53_04515"
     tmRNA           6425..6783
                     /gene="ssrA"
                     /locus_tag="VIS53_04515"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         1592 a         1828 c         1952 g         1554 t
ORIGIN      
        1 ccacgaatag gggcttaaca gtggccaatg gccttcggac cagctgcgcg ccatgtcggc
       61 gaacacggga agaacagaca attcataatc gtcattccaa aaaacgagcg gattgtgcca
      121 gagcagtatg agactaaaga caatgacgag taatccggct gaaagcgcgc caagaactgt
      181 ggaacgcgtg cgcgctgcgt ccatcgctgt ttctttcaac gcccaacgtc caacactcaa
      241 cgctcaacgc tcaatgagaa gattcgcagc gtcacttcgc gttcctttca gtcgttcgaa
      301 cgctggagaa gaaaattttg atgagttctt cagtctcctt cagaatcgcg gtcattttcg
      361 gcgttggcag cattgacgat ttcgcaatca atcgcaacca gcgacgagtc tctttcagtt
      421 ccttgagaca aacctttaat ttgtgaatga aatccttgcg cgattcggcg gcttcaacct
      481 cgccgtgatt tccatatggc gaagttccac aacgcaagag ctgcccagcg acgtgattag
      541 ccgctcgcgt gtttggcagc gcgtcaacca attgtataat ccgcgcgctg aaatcaagca
      601 ttcgaccttc tagatcgaag cgggatttgc tggctgattg agcgttggac gttgggcggt
      661 ggaagttggg cgttgccgtt ttcaagacat aaacaccttc gtcttcccga acaccaggcc
      721 attcgatatt gagcgtcggg cgttcggcgt tcggcgtttt tctcttcata gcacgactgg
      781 tttgccctca gtcatcacaa gcacgttttt ctcgagtccg tgcgcgcgtg ccgctgccag
      841 caatcgctgc ggcggttcgt ggagcggctc gaaaccgaga gggaacgttc cgtaatgcat
      901 cgggattagc ttcttggcgc gcagctccag aaaagctctt accgcctctt cgggattcat
      961 gtgaacttcg cggccggtgg gcgcttcata agcgcctatc ggaagcaatg ccaagtcgac
     1021 actgaagcgg tcgccaattt ctttgaagcc cgggaaataa gctgtgtcgc cacaatgaaa
     1081 gatcgtgcgg ccgttcgacg cgatcacaaa cccaccgaaa tcgcggtgca aatccgcaag
     1141 aaaccgggct ccccagtggt gacagggcgt gagcgaaatc ttgagcggtc cgagttcgac
     1201 ggtctgccag tagtcgagtt cgtgcacaat gtgaaacccg agatcgtgga ccaagtttcc
     1261 cacgccggtt ggaaccacga ggggttggtt cgcggctacg cgccgcagcg tgcgtcgatc
     1321 aaggtgatca aaatgcgcat gcgtcacgag tacgaagtca atggaaggca aatgatggat
     1381 ttcgaagcca ggccgtttca atcgtttgat gaccttgagc catttcgacc aaatcggatc
     1441 gatcaggatg ttcacctcgt gcgtttggat gagaaatgac gcgtgaccga tccaggtaat
     1501 gcagatctcg ccttcgcgga tcttcggaaa ttgcggcggg acgtaatcgc cggatcgctt
     1561 cacgaacagc gatggaatta aaacactcgt cagaaaattg cgtttgtgcc aatcggaccg
     1621 cgggcgcagc cggacgcggg tggaatgccg ccccgctgga acaggagtat cgccgtctgg
     1681 cgactggcga acaatatttc gccgtttctt tttcggaaag cggattggca cggtcttaga
     1741 acgatattgg acagttacaa agtggaaagc gttaaaacgt tacaaacttc agacatagca
     1801 atccagcgag cgtccgacgg tctaagcctg tagccctttg accttgtaac tttctacaac
     1861 cggcgttcag ttaattcttc atatgaggag ctggagggtc tgcgtcacac tatttttcat
     1921 ttgttcagcc ggaatagcgt ccgaatcgcg cttgccgttc ggcactgtgt tcaaggggca
     1981 ggagcaattc aaccggctgg ttgccaaggc gaaagcagag aactggaaat cactaccgat
     2041 cggcgatcgg actgcggcgg ttggaaaagc gctggtcggt acccgctaca aacatttcac
     2101 cctcgagatc gataaccgga tcgaatcgcc ttcggtgaat ttctacggga tggactgctg
     2161 gacgtttttc gaaacggcac ttggctttgc gcgaatgttg aacgaaccgg aatcaaattg
     2221 gactccggaa cgtttactgc actacatcga gatggaccgg tatcgcggcg gccaatgcac
     2281 aggcgattat ctttcccggc tgcattacct ggaagactgg ctttacgata acgatcgccg
     2341 cggtttggtt aacgatatga cgcgtcagct tggcgggcga agcgtcccgc attccgcgcg
     2401 cgagatgagc gttgggtggc ggcattatcg gtaccttgct tcgaatcgct cgttgctcgg
     2461 gcctcttgcg cgcatggaag cgaatgtgtc atcgcggccg ctctatgaaa ttccaaaaag
     2521 cgaggtcgcc aagatcgaac cgaaattgag cagcggcgat gttatcggag tcatttcgcg
     2581 ggagcgaaac gggctccgtt cgaccgcgca tgtggggctt gcactacgca cgagcgatgg
     2641 cgtcttgcat ttcatgcacg catcctcgcc gaggaattac ggcaaagttg tcgtggacga
     2701 ccagctctcg aaatacctgt atcgctacgg ctccgacagc ggaatccttg tcgcgcggcc
     2761 cctgcgataa ggccaattat atctctctcg gcgattcggt cttgcgctga tggtcgccaa
     2821 aacgagaatg ccaaaatgaa acgcgcaaag tttttagcat cgatctcgct ctgttttgcc
     2881 acaacagcct actgtctcgg cgaaacgaaa attcgcgttg ggcattttcc aaacatcacc
     2941 cacgcacaag gggtcgtggc acacgcgctt tcgcgtcagg gaaaaggttg gtttgaacaa
     3001 cggctcggct ccgacgtgaa aatcgagtgg ttcatttaca acgcgggtcc gagcgcgatg
     3061 gaagccattt tcgcaaaatc gattgatctg acctacgtcg gtcccggacc cgcgctcaac
     3121 gcttataata aatccaatgg acaggaggtt cgtctgatcg cgggcgcggc caatggcgga
     3181 gctggtttgg ttgtgcagcc ggacgcaaat ctaaaggcgc cggcggattt tcgaggtaaa
     3241 aaaatcgcta cgccacaatt aggcaacacg caggacattt cgtgtcgagc atggctgacg
     3301 gagggtggac tcaagatcac gcaactcggc ggcgatgccc aggtaattcc aacccaaaat
     3361 ccggatcagt taagcctttt taaagccaag aaaatagacg gcgtttggac tgtcgaaccc
     3421 tggctatctc gcctcgaaca ggaagcatcc ggaaaggtta tcgtcgaaga aaaagactcg
     3481 ccaacgacag ttctggtttc gagcgcaaag ttcctgaatc aacagcgtga actggtaaaa
     3541 aaatttgcca acgcgcatgc ggagttgacc gagtggatca caaagaaccc ggaagaagcg
     3601 cagcgtttga tcaaggccga actgctggca gaaacgaaga gtgacatgaa cccgcaactt
     3661 atcgacgcgg catggaaacg cattgtattt accgcggtaa ccccgcgcgc cgcagtggaa
     3721 aaatttgtac agaattcggt caaagccggc ttcatcaaga cagcacctga tctttccaag
     3781 ttgttcgaaa atccctgatg tcgctccagg aagagctccg aggtccgccg cctgcaaagc
     3841 tggtggtgga ccatgtttca aaatggttcc aacaaaagcg acagaacgtg cacgcgctgg
     3901 atgatgtctc gctggaagtc gccgaaggtg agttcatcgt catggttggc ccgagcgggt
     3961 gcggaaaatc aacgttgctc gacatcatcg ctgggctgga aaagccggac aaaggtcggg
     4021 tgctcgcgga caatcagccc gtcctccggc cgggacggca tcgactggtt atgtttcagg
     4081 aatcggcact gtttccgtgg ttaaatgttt tcggcaatgt gatgtttggt ttgaaactca
     4141 aacccggttt gcgcaatcgg gagcggcgcg aggtcgcaaa attctttctt catctggtcg
     4201 gccttgaaaa atttatggaa tccaacgtgc acgaactctc tggcggtatg aaacagcgtg
     4261 tggccctggc gcgcgcgctc gcgccgaacc cgcgcgtgtt actcatggac gaacccttcg
     4321 ccgcactcga cgccatgaca cgtgagcaac tctatggcga catccaacag atttggcaga
     4381 agcgtcgtaa gacgatcatc ttcgttaccc acaacgtgcg agaagcggcc tgtcttgcgg
     4441 atcgagtggt gatcatgacg ccgacgcccg ggcggattcg cgacattttc gaaatcaaac
     4501 tgccgcggcc gcgcgatttc aacagcatcg agatcgcccg acatgcgtcg caattgacgg
     4561 gagcactaaa aggttacctg gcgccggaac cggtggtaag cgtggaatga gaagggcttt
     4621 gctggcgatt ttgtttttca tcgcgctcct tgcgatttgg gtcgcactag tacacgcaga
     4681 aatttggtca ccagttcttt taccctctcc gcgcaacgtt tctgagtatt tggttaatgc
     4741 cgcacgcgat ggcactctcg taagcgcttc gggtgtcacg ttgcggcgtc tgatcgtcgg
     4801 gtatttcatc ggcctcgcga ttgggctgcc gctcgggctt ctaactgcat ctttaaaatt
     4861 tgctgaagac acagtcggtg ttctcgcgct tggcctgcaa acattgccga gcgtctgctg
     4921 ggttccgctg gcgttgctct ggttcgggca gaccgaaggc gccatgctct tcgtcgtcat
     4981 catgggcacg atctggtcag tggtgattgc gaccgacacc ggcgttcgta cgatttcacc
     5041 aatctatgcg cgagctgccc gaacgatggg ctccggcccg ttccatcggt ggattcgcgt
     5101 cattttgccc gcatccctgc ctcatttgat cagcggaatg aaacaaggct gggcttttgc
     5161 atggcgttca ttgatggccg cggaaattta cgtcacgatt ctgaccggat tcggtctcgg
     5221 ccatctgctt cactacggtc gcgagctaag tgcgatggat caggtgatcg gcatcatgtt
     5281 ggtgatcgtt gtgattggtt tacttgccga taagatcttg ttttccccat gggagcgatt
     5341 cttacaccga cgttggggaa ccggcaggac gtgagtctac cgaggcaccg cgttcaggcg
     5401 gtatagccga atcgacgatc gagctctgtt aatgcagctt cggcaaattg ttggtcttcc
     5461 gccgacaggt attcgcgata ccctccaact tttccgcggc gcaccttgaa cgattctgga
     5521 tcgcgcacat cgcccggatg cagaatgttt gaatcaaaag ctcctgcggc ctcgagcttt
     5581 tgcatgttct cgaaccggga aaactcgagc gcctcccgga aaatattcgc gtcgggcgat
     5641 ggttcaccga gcaccgcaag caaatcacgg aaatgttcgg ccggtgaacc gcgcaatgct
     5701 tcgtatcgga cgagggtgaa attgtcacga tgagagaact cgttaagcca gttgttcatg
     5761 gcattaacaa tggcgcgcac acccaacttt tcgtcgcgca acatttcgct caccgtcttt
     5821 tgcctgaggt caaccggcgc atttggatcg cgccgtgtca gctgcaagta gagagaaacg
     5881 aaacaatcac gcggatctcg ggcgagcagg atgatctttg cccggttaag ctcgcgtcgc
     5941 ggaacgagat atttgccgcg aattctgtcc caccgatcgc ctttggtgcg atgctcaaac
     6001 agatcatgag aaaagacaat ccgcggaaaa ccgggcaaag cgtaacgtcc cggacgcaac
     6061 gtgaactcga ggccgaagcg tctgcagaag taagcgcaaa aaaatgcccg aagccatgtg
     6121 cggccactct tggggatgga gagaatgatg gcgtcgccgc ctgaaagttc ccgcgcacga
     6181 ctactaaagt tccgccgggt ccacgtcgga tttgttaggc gaaatcgcga ccgcaagctg
     6241 cgctggctgc tacttggaaa ctcagaaacg gtcgtcagct ggctttcctt gtaatcggcc
     6301 gccgcttccg tttgtccacc ggccaaagat tcagatgtga tttcgaccgc cattgctcgg
     6361 ggggatcctc ggactgcttg cataagactg caaacagcgg tacatattca agcagaaatt
     6421 atttgggggc gtactggctt cgactcatcg ttggaagcgc agacggcatg tcgaggatgg
     6481 ttccgttggc ctcgttaaaa accggaccaa acaaataaac gcagatcacc aagatctcgc
     6541 tctcgcggct taattgaccg tgacgtttgg agttggacgc ctgctacggc gccaaacgtg
     6601 gacagcaggc taatcagacg gcggagcgac cgcgccggat ggtgaaggaa attcgtggac
     6661 gctcgggagt cggcagtgtg ccggcgcaac gttcggctcc ctaaaatttt tcaccggata
     6721 aacatgtaga tgtttgcgcg gatagcgacg aggacagggg ttcaactccc ctcgcctcca
     6781 gccttcgctc gcaacgtagt gaagagcgaa ggctgtcgcg ccgtagcatt ggcgaaggcg
     6841 gaccgtaccg tatccatgga acgtttgttg cgagctacgg ctcggcaggc cagccacgaa
     6901 taatggtaaa gtttagctat gtttgc
//
LOCUS       DATDAJ010000183         2757 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1091489, whole genome shotgun sequence.
ACCESSION   DATDAJ010000183 DATDAJ010000000
VERSION     DATDAJ010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091489"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1186
                     /locus_tag="VIS53_04520"
     CDS             <1..1186
                     /locus_tag="VIS53_04520"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY5767079.1"
                     /translation="RTEDLVMLTREENEKITRVGPGTPAGELLRRYWFPVGVASELTA
                     ESPTQIVRILGETLVLFRDKKGNVGLLNDRCSHRGASLCYGRVEERGIACPYHGWLYD
                     TKGNCLETPAEPAGSKFHLTVKQKSYPVQKLVGLYWAYLGPQPLPLIPNFDVWFRKDG
                     HRKIFIQPQLDCNWFQAMENSMDPAHLQILHQDTANRGRPIKDSTRGLTDDVQEFDFY
                     EVSYGLMKRRTYKNGMIDEHPVIFPNILRQGNVGQIRVPMDDTHTKVYFVRFFPSQNG
                     EIVENDEPPMEYIKPYKNPPDALHPYTKFRMDMVQAQDHMAWETQGPIADRTNERLTS
                     SDRGVILLREVMFRELKKVQQGQDPMGIVRDPANNPFIDTHLLESIAQIGDDRAPRAV
                     NQ"
     gene            1416..2144
                     /locus_tag="VIS53_04525"
     CDS             1416..2144
                     /locus_tag="VIS53_04525"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY5767080.1"
                     /translation="MADLTKLRELVAQSCRVLGKLNLTKEPSGHVSARVPGEDKVLIK
                     ARGPEESGLRFVSARDIITVDFNGKKLAGDDGLDVPQEVFIHTWLYKTRPDVECVVHV
                     HPLTVVLFTICGKPLQPLFGAYDPSGLRLLVEGLATYPRSITVSNEKLGEEFAHAMGN
                     KQACLMRGHGITSAGPNVEDATLTAIKLNDAAVINYQASLLGTPQPISQEDIEILVGK
                     SRGGNKAVHANSNWRYYCKLLDEE"
     gene            2242..>2757
                     /locus_tag="VIS53_04530"
     CDS             2242..>2757
                     /locus_tag="VIS53_04530"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767081.1"
                     /translation="MAQPVLEFREVVKRFGAVRAVDGVNFSVQRGEIFTLLGPSGCGK
                     TTTLRLVAGLEEPDGGEIHLDGKIVAAPQRGVFLPPEKRQLGMVFQSYAIWPHLTVFE
                     NVAFPLRVRRESTELIRQRVDHALESVGLGGFADRGAMQLSGGQQQRVALARALVYEP
                     AVLLLDEPLSNL"
BASE COUNT          624 a          779 c          769 g          585 t
ORIGIN      
        1 aaggacggag gatttggtca tgctcactag agaagaaaat gaaaagatca cgcgcgtagg
       61 accggggacc cccgccggtg aactgttgcg ccgctattgg tttcccgtcg gcgtcgcgag
      121 cgagcttacc gctgaaagcc ccacgcaaat cgtacggatt ctcggcgaga ccctggtgct
      181 gtttcgcgac aagaaaggca acgtcggtct gttaaacgat cgctgctcgc accgcggcgc
      241 ttcgctttgt tatggacggg tcgaggaacg gggcatcgct tgcccgtatc atggctggct
      301 ttacgacacc aagggaaact gtctggagac gcccgctgaa cccgccggaa gcaaatttca
      361 tctgaccgta aaacaaaaat cctatccggt gcaaaaatta gtcggtcttt actgggctta
      421 tctggggcca cagccgctgc cgctgatccc caacttcgat gtttggttcc gaaaggatgg
      481 tcaccgaaaa atcttcattc aacctcaact cgactgcaat tggtttcaag cgatggagaa
      541 ttccatggac ccggcgcatc tgcagattct ccatcaggat acggccaatc gcggccggcc
      601 gattaaagac agcacgcgcg gactcacgga tgacgttcaa gaattcgact tttacgaggt
      661 ctcttatgga ctcatgaaac gccggacgta caaaaacggc atgatcgacg agcatccagt
      721 gatcttcccg aatatattgc gtcagggaaa cgtcggccaa attcgcgtgc cgatggacga
      781 tacacacaca aaagtttact tcgtgcgctt tttcccatct caaaacggcg agatcgtcga
      841 gaacgacgaa ccgccgatgg aatacatcaa gccttacaag aacccgcccg acgcgctcca
      901 tccctacacg aagttccgca tggacatggt gcaggcccaa gatcatatgg cctgggaaac
      961 tcaggggcca atcgcggacc gcacgaacga gaggctgacc agctcggatc gtggcgtcat
     1021 tctgctgcgc gaagtgatgt tccgtgaatt gaaaaaggtg cagcagggtc aagatcccat
     1081 gggcatcgtg cgtgatccgg cgaacaatcc atttatcgac acccacttgc tggagtccat
     1141 cgcacaaatc ggcgacgatc gcgcgccgcg cgccgtcaat cagtaacgct ccaaccgagc
     1201 tcctcgatca ccctccgagg ggctcggttg tttttgcttc gagtccagag tctgctactc
     1261 gggttttctc aacgaacgcc gaattcaaat cgcgattatc cgcccggttt cccgcgcgcc
     1321 cgaccaaact cttagcttgc cttggcattg gaccgaggct atgatccagt cgcttcagtg
     1381 acgatcgaat tcaagaacag cggagaataa tttttatggc tgatctaaca aagttgcgcg
     1441 agctggttgc ccagtcctgc cgcgtcctcg gcaaacttaa ccttacaaaa gagcccagcg
     1501 gccacgtcag cgcgcgggtg ccgggcgagg acaaagttct catcaaagcg cgcgggcccg
     1561 aggagtcggg tctgcggttt gtcagcgcgc gcgatatcat caccgtcgat ttcaacggca
     1621 agaaactggc gggcgacgac ggcctggatg tgccgcagga agttttcatt cacacttggc
     1681 tctacaaaac gcggcccgat gtcgaatgcg tcgtgcacgt gcacccgttg accgtggtgc
     1741 tgttcacgat ttgcggtaag cctttgcaac ctctattcgg cgcgtacgat ccgtctggac
     1801 tacggctgtt ggtcgagggc ctggcgactt acccgcgcag tatcactgtg tcgaatgaaa
     1861 agctgggcga ggaattcgct cacgcgatgg ggaataaaca agcatgcctc atgcgcggcc
     1921 atggcatcac cagcgcgggg ccgaacgtcg aagacgcgac gctgacggcc atcaaactca
     1981 acgacgcagc ggtaatcaac taccaagctt cattgcttgg cacgccgcaa ccgatttcgc
     2041 aggaagacat tgaaattctc gtcggcaagt cgcgcggcgg caacaaagca gtccacgcca
     2101 attccaactg gcgctattac tgtaagctgc tcgatgaaga atagttccta aacgcgttcg
     2161 cgtcgttcaa gacgttccaa tcgttccaga cgttcgagca atgctcggtc catccaaggg
     2221 ataaccgttc gtttgtttgt catggcgcaa cccgttctcg aatttcgcga agtcgtgaaa
     2281 cggtttggtg ccgttagagc cgtcgatggc gtgaattttt cggttcagcg cggcgagatc
     2341 tttactttgc tgggtccgtc cggctgcggc aaaacaacca cgttgcgctt ggtggcggga
     2401 ttggaagaac cggacggcgg cgagattcat ctcgacggca aaatcgtcgc ggcgccgcaa
     2461 cggggagtat tcttaccgcc tgaaaagcgc caacttggaa tggtttttca gtcctatgcc
     2521 atctggccgc acctgacggt tttcgaaaac gtcgcgtttc cgttacgcgt gcgacgtgaa
     2581 tccaccgagt taatccgaca acgggtcgat catgcgctgg agagcgtcgg cctaggcggt
     2641 tttgctgatc gcggcgcaat gcagctttcc ggcggtcaac agcagcgtgt cgcgctggcg
     2701 cgggcgctgg tgtacgagcc cgccgtatta ttgctcgatg aaccgctgtc gaatctc
//
LOCUS       DATDAJ010000184         2614 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1094324, whole genome shotgun sequence.
ACCESSION   DATDAJ010000184 DATDAJ010000000
VERSION     DATDAJ010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094324"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..>2614)
                     /locus_tag="VIS53_04535"
     CDS             complement(20..>2614)
                     /locus_tag="VIS53_04535"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY5767082.1"
                     /translation="DFLKPHGFCFGPDVATSSRATLGGMIANNSSGARCPVYGTTADH
                     VISLEIVLADGRVEEIGASHESLVRERAKIEELVRAASTEIAERWPPGLIKRWPGYGL
                     ERFLRVPDDLTNILAGSEGTLAAIFSAELKISPLPREKGLGLIFFASVAEAMQATVEL
                     LDLKPAAIEHIDRPLFDGTKGQLQFQAARDLLDLDTKPCESILIVEFYEDVAERLSLL
                     QSRKIGLRTKILTDPAQMNMVWSVRKSGLSLLTGCIGPAKPVAFIEDAAVRPAQLPEY
                     VRGLQSIMKPLGLTASYYGHAASGLLHVRPVLDMHSAADLKKFRQVADETSALVRQFK
                     GSLSAEHGVGIARTEYMRDQLGNQLLEVMREIKRAFDPKNVFNPGKIFDCSHGAVSPC
                     PGSCGERLDTARRLQSHKIDNHLRENFTRPLELPFQPVLAFAFKDRSFTGNLEQCNGC
                     GGCLKQSGIMCPTFIATHDEVMSTRGRANIIRAALELRTNGHDPLKSAELDAALSNCL
                     SCKGCTPECPSNVNLALLKAEMLHARWRRDGLPLRERILSNIDLLGKLGCLMPRLTNR
                     LLGSRAARVAMEKTIGISARRSLPHYANERFDKWFRRHCRASVSDAEALHTNALQKNR
                     GKVILWDDTFVRYHEPHIGIAAVKVLEALGFEVSLIKNRRCCGRPAFSQGNLEAAASL
                     AKHNISQLSTLNSQVSTAPILFLEPSCWSMFVDDYRELKIENAENIAGRCFLFEKFVA
                     DLLAKEPEALRFKHESSSRGILIHPHCHAKSILNPTFMATLAERLPGIKATMLDTACC
                     GMAGAFGALAEKYDLSLQVAQRLLDQIANQPQGTAVIASGTSCRHQITDLTNLRPKHM
                     AELLAEAL"
BASE COUNT          535 a          705 c          774 g          600 t
ORIGIN      
        1 ccctagcgcg aattttccgc tacagcgctt ctgcgagcaa ttcggccatg tgttttggtc
       61 gcagattcgt taggtcggta atttgatggc ggcaacttgt gcctgacgcg attactgctg
      121 ttccctgggg ctgattggca atttgatcga gcaagcgttg tgcgacttgg agcgatagat
      181 cgtatttttc tgcgagcgcg ccgaatgcgc ctgccattcc gcagcacgct gtgtctaaca
      241 tagtggcttt tatgccaggt aaacgttcgg ctagcgtggc catgaacgtg ggattgagaa
      301 tggattttgc atgacaatgc gggtggatga ggatcccgcg gctgctggac tcgtgcttaa
      361 accgaagtgc ctccggttct ttcgccagta aatcggccac gaatttctcg aacaggaaac
      421 agcgtcccgc gatgttttcg gcgttttcga ttttcagctc gcggtaatcg tcgacaaaca
      481 tcgaccagca cgagggttcg aggaagagga ttggagcggt tgagacttga gagttgagcg
      541 ttgagagttg agagatgttg tgcttggcga ggcttgccgc ggcttcgaga tttccctggc
      601 taaatgcggg gcgaccgcaa cagcggcggt tttttatgag cgacacctca aagccgaggg
      661 cttcgagtac tttcacggca gcaatgccga tgtgcggttc gtgataacgc acgaacgtgt
      721 cgtcccaaag aatgactttg ccgcggtttt tctgtagggc gtttgtgtga agcgcctcgg
      781 cgtctgacac agacgcccta caatgtctgc gaaaccactt atcgaagcgt tcatttgcgt
      841 aatggggcag cgagcgtcgt gcggagattc caattgtttt ctccattgcg acgcgcgccg
      901 ccctagaacc gagaagccga ttcgtcagcc tcggcatgag acagccgagt ttgcctaaca
      961 aatcgatatt gctcagaata cgttcgcgca gcggcaggcc atcgcggcgc catcgggcgt
     1021 gaagcatttc cgccttgagc agcgccaggt tcacgttcga cggacattcc ggcgtgcaac
     1081 ctttgcagga gagacagttg ctcagcgcgg cgtcgagctc ggcggatttc agtgggtcgt
     1141 gtccgtttgt tcgcagttcg agcgcggccc gaatgatgtt ggcgcggccg cgtgtggaca
     1201 tcacttcatc atgtgtggcg atgaaggtcg ggcacatgat gccgctctgt ttaaggcagc
     1261 cgccgcagcc gttgcattgc tcgaggttgc ctgtgaatga ccgatctttg aacgcaaacg
     1321 cgagcaccgg ctgaaatgga agctcgagcg gacgagtaaa attttctcgc aagtgattgt
     1381 cgattttgtg ggactgtagc cgcctcgctg tgtcgaggcg ctcgccgcac gatcccggac
     1441 acggcgacac agcgccgtgg ctacagtcga aaatttttcc aggattgaaa acattcttgg
     1501 gatcgaacgc gcgtttgatt tcgcgcatca cctccagcaa ctgattgcca agttggtcgc
     1561 gcatatattc ggtgcgcgcg atgccaacgc cgtgctcggc ggagagcgaa cctttgaact
     1621 gacgcaccag cgcggaagtt tcatccgcga cttgccggaa ttttttcaga tcggcggcgc
     1681 tgtgcatatc gagcaccggt cgcacatgca aaagcccgct ggcggcatgc ccgtaatagc
     1741 tcgccgtcaa ccccagtggt ttcatgattg attgcaaacc gcgcacgtat tcgggcaatt
     1801 gcgcgggacg aacagcggcg tcttcgatga acgcgaccgg cttcgccggt ccgatgcatc
     1861 ccgtcaaaag cgacagcccg gatttgcgca cagaccagac catgttcatt tgcgctgggt
     1921 cggtgagaat ctttgtgcgc agcccgattt ttctcgattg cagaagtgac aagcgctccg
     1981 cgacgtcttc gtagaactcg acgatcaaaa tcgattcaca cggttttgtg tccaagtcga
     2041 gtaagtcacg cgccgcctga aactgaagtt gacccttggt tccatcgaac aatggtcgat
     2101 cgatgtgttc gatcgcggca ggcttaagat cgagaagctc aaccgtcgcc tgcattgctt
     2161 cagctaccga tgcgaaaaag atcagaccca aacctttctc ccggggcagg ggagaaatct
     2221 tgagctcagc ggaaaagatg gccgccagcg ttccttcgct gccggccagg atgttggtca
     2281 gatcatctgg cacgcgcagg aatcgttcga ggccgtagcc gggccaccgt ttgatcaaac
     2341 cgggcggcca gcgctcggcg atttcggtgc tcgccgcgcg aacgagttcc tcaatctttg
     2401 cccgctcgcg gactaacgac tcgtggcttg ctccgatttc ttcaacgcgg ccgtcagcca
     2461 acacgatttc cagtgaaatc acgtgatcgg ctgttgtccc ataaactggg caacgcgcgc
     2521 cggacgaatt gttcgcgatc attccgccga gggtggcgcg agagctcgtt gctacgtcgg
     2581 gcccgaaaca aaaaccgtgc ggctttagga agtc
//
LOCUS       DATDAJ010000185         5119 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1094887, whole genome shotgun sequence.
ACCESSION   DATDAJ010000185 DATDAJ010000000
VERSION     DATDAJ010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1094887"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VIS53_04540"
     CDS             <1..382
                     /locus_tag="VIS53_04540"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF012496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HEY5767083.1"
                     /translation="ILLKPNMVLSGKESPQQASVQEVAEATVRCLKRVVPAAVPGIVF
                     LSGGQSDQQATEHLNAMNRMEDLPWQLSFSYGRALQAPVLKAWKGDTSNVSAAQTAFH
                     HRAWCNSKARFGKYTEEMETAKAA"
     gene            696..857
                     /locus_tag="VIS53_04545"
     CDS             696..857
                     /locus_tag="VIS53_04545"
                     /inference="COORDINATES: protein motif:HMM:NF015798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HEY5767084.1"
                     /translation="MASGSEFAARICGICAEICQACGDECAKHKAQHCQDCAKACQRC
                     AEECRKMAA"
     gene            1031..3391
                     /locus_tag="VIS53_04550"
     CDS             1031..3391
                     /locus_tag="VIS53_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008063311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEY5767085.1"
                     /translation="MKLSAQNRGTDHVCCHADHHSTSDAAVAAPERKAAKKYFCPMCK
                     GVENDAPGSCPRCGMALERNPAFPKPERIIYTCPMHPQIQQDRPGNCPICGMTLEPKT
                     LRVGDQEEQNEIKWLSRKFWIALVLTIPVLIIAMGHAVPGLHLDAIVPRQIGKWIEFG
                     LTTPVVLWAGGFFFTRAWQSIINRSLNMFTLIAVGVGAAYVYSAVAVIAPGIFPESFR
                     RHGEVDLYFEAAAVITALILLGQLIEAKARSRTGQAIKALLGLAAKTAHRIRDDHEEE
                     ISVDAIQKGDLLRVRPGEKVPIDGVMVEGQSNVDESMITGEPMPVSKGAGDRVVGATV
                     NQTGSFLMRAEKIGSETLLAQIVQMVAEAQRSRAPIQKLADNVSGYFVPAVISIAVIT
                     FIVWSIVGPVPAMAYALVNAVSVLIIACPCALGLATPMSIMVGVGRAAQTGILIKNAE
                     AIEITEKVTHLITDKTGTLTAGKPEVVSRVTDKGTSEHDLLQIAASVEAHSEHPLARA
                     IVEAAKKEQIGLREITDFQSTTGGGVSAQLATVSPSGGGLDGKRVLAGKEKFLADSNV
                     TFSNELKRQADRLQEQAQTTVWIALDGHAVGVLGIADPIKPTTRTAIRALHDMGLKII
                     MCTGDNRRTAESVARELDIDEVRAEVMPDEKIEIVKRLKASGAIVAMAGDGINDAPAL
                     AAADVGIAMGTGTDVAIESASITLVKGDLMGIVKAMHLSRAVMRNIRQNLFFAFIYNA
                     LGVPIAAGVLYPLFGILLSPMIAGAAMSFSSVSVIANALRLRTVKL"
     gene            3689..4039
                     /locus_tag="VIS53_04555"
     CDS             3689..4039
                     /locus_tag="VIS53_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767086.1"
                     /translation="MTEATMSDVSDGLKKFISGYAAKSSDNKFHIPYQRKDLALDLVK
                     LHDDRFSNLGGDKYFACVDMKGADGKIYDIDFFMVVKPGKLTVTETSVHKINGKALYN
                     WKQEGGVWKKVKAS"
     gene            complement(4448..5080)
                     /locus_tag="VIS53_04560"
     CDS             complement(4448..5080)
                     /locus_tag="VIS53_04560"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY5767087.1"
                     /translation="MSATLAIPLITGLIPGMWLDAAAQAQLADRPPSLGGVEAFSAPL
                     NEGNALIGIRPGGWTARDWINSEPLELDALRGKVVLVRWWTAPGCAFCEASAPALNDF
                     WKRYGSRGLLVVGFYHHKSSEPLSVANVKRQSRKFGFEFPVAIDPDWKTLRRWWLDKH
                     DRGWTSVTFLLDRRGVIRHVHPGGAFFKGEPGYNLLEKKIQELLDKSFTT"
BASE COUNT         1234 a         1382 c         1430 g         1073 t
ORIGIN      
        1 aatattgctg aagccaaaca tggtgctttc gggcaaagag agtccacagc aggcttcggt
       61 gcaggaagtc gctgaagcca cagttcgttg tctgaagcgg gtggttccag cggctgtgcc
      121 tggtattgtg tttctctcgg gcggccaatc cgatcagcaa gcgaccgaac atctaaacgc
      181 gatgaatcgt atggaagact tgccttggca gttgagcttc tcctatggac gcgccttgca
      241 agctccggtc ctcaaagcct ggaaagggga cacatcaaac gtcagcgcag cacaaacggc
      301 attccatcac cgtgcgtggt gcaatagcaa agcgcggttc ggcaaataca ctgaagagat
      361 ggaaaccgct aaagccgcat aatatttggg ctccttagcc caagtagcga cgtatcatcg
      421 aaattctttt ttgttccatc cgccggctgc ggttcgtgcg atagctacgt tgaaagccgc
      481 gacatgtaac acccgaagtt acgtagcagg gtaaccggag gaatattatg ccacacgaaa
      541 aatatcagag ctgtatcgac gtatgtaacg actgcatggt tgcttgcgaa cattgcgcga
      601 cggaatgcct gcatgagcag gatgtgaaaa tgatggcgcg ctgcatcgaa ctggatcgcg
      661 cctgcgccac aatatgcgcg actgcagcgc gcttgatggc gagcggttcg gagtttgccg
      721 cacggatctg cggcatctgc gccgaaattt gtcaggcctg cggcgatgaa tgcgcaaaac
      781 acaaggcgca acattgtcag gactgcgcaa aggcatgtca gcgctgcgcg gaagaatgcc
      841 gcaagatggc agcttgagtt aggcgtacca cttcagaaac cacaaacgtc agcttctgga
      901 aatggccgaa tcctggaagc cctccaggtt gagggctgtg cggcggtgct acgcgcgact
      961 ggacgtgcag cgttgcgctt cgagttgacc ctgccgaatg tgctacccct agcacgacat
     1021 cggctcgcca atgaaattat ctgcgcaaaa cagaggtaca gatcatgttt gctgtcacgc
     1081 ggatcatcat tccacgtcag acgcagcggt agcagcaccg gaacggaaag cggcaaaaaa
     1141 atatttctgc ccgatgtgca aaggcgtgga gaacgacgcg ccgggcagtt gtcccaggtg
     1201 cggcatggcg ctggagcgca atcctgcttt ccccaagccg gagaggatta tctacacctg
     1261 cccgatgcat ccgcagattc agcaggatcg cccgggaaat tgcccgatat gcggcatgac
     1321 gctggagcca aagactctga gagtagggga tcaagaagag caaaacgaga tcaaatggct
     1381 atcgcggaag ttctggatcg cactagtgct taccatcccg gtgttaatca tcgcgatggg
     1441 ccacgccgtc cccggactgc atcttgatgc aatcgttcca aggcaaatcg gaaagtggat
     1501 cgagtttggc ctaacgactc ccgttgttct ttgggcgggc ggctttttct tcactcgagc
     1561 ctggcaatcg atcatcaacc gcagtctcaa tatgtttacg ctgatcgccg tcggcgtggg
     1621 cgcagcttat gtctacagcg cagttgcggt aatcgcgccc ggaatttttc ccgaatcttt
     1681 ccggcgacat ggcgaggtag atctttattt tgaagcagca gcggtcatca cggcgctgat
     1741 tttgttaggc caactaatcg aggcgaaggc acgcagtcgc accgggcagg ctatcaaagc
     1801 cttgctcggg cttgcggcaa aaaccgcgca tcgcatccgc gatgaccatg aagaagagat
     1861 ttcggtggac gcaattcaaa aaggcgacct gctgcgtgtg cgtcccgggg aaaaggtgcc
     1921 gatcgacggt gtgatggttg aaggccaaag caacgtcgac gaatcgatga tcacaggtga
     1981 accgatgcct gtgagcaaag gcgcaggcga cagagtggtc ggcgccaccg tgaatcagac
     2041 cgggtcattt ttgatgcgcg ccgagaaaat cggatcggaa acgctgctgg cccagatcgt
     2101 tcaaatggtc gcggaggcgc agcgcagccg cgcgcccatt caaaaactcg ctgacaacgt
     2161 ttcaggttat ttcgttccgg cagttatcag cattgccgtg attactttta tcgtctggtc
     2221 gattgtcggc cctgtgcctg cgatggctta cgcgctagtg aatgctgtat cggtgctaat
     2281 tattgcatgt ccatgcgcgc tcgggcttgc gacaccgatg tcgattatgg tcggtgtcgg
     2341 gcgcgcggca cagacgggga ttttgataaa aaacgccgag gctattgaga tcaccgaaaa
     2401 agtaacacac ctgatcacgg ataagactgg cacattaaca gccggcaaac cggaggtcgt
     2461 cagccgagtg actgataaag ggacgagcga acacgatctc ttgcagattg cggcttcagt
     2521 ggaagcgcac agcgagcatc cgcttgctcg cgcaattgtg gaagcggcca aaaaggaaca
     2581 aatcgggttg cgcgaaataa cggattttca gtctacgact ggtggcggcg tgtccgcgca
     2641 gctcgccacg gtgagtccgt ccggtggcgg actcgatggc aagcgagtgc ttgccggcaa
     2701 ggagaaattt ttggctgatt cgaatgtcac gttttcgaac gagctcaaga gacaagcaga
     2761 tcgcttacaa gaacaagcgc aaacaaccgt ttggatcgca ctggatggac atgcagtcgg
     2821 agtccttggt atcgcggatc ccatcaagcc aaccacccga acagcgattc gcgcgcttca
     2881 cgacatgggc ctgaaaatca tcatgtgcac cggcgacaat cggcgcactg ccgaatcggt
     2941 tgcgcgcgag ttggacatcg atgaagtccg cgcggaagtg atgcccgatg aaaaaatcga
     3001 gatcgtcaaa agattgaaag ccagtggcgc aatcgtcgca atggcgggcg acggaattaa
     3061 cgacgcgcct gcgcttgcgg ccgctgatgt ggggattgcc atggggactg ggaccgatgt
     3121 cgcgatcgaa agcgccagca ttacgctggt gaaaggcgat ctgatgggca tcgtcaaagc
     3181 aatgcatctc agtcgcgcgg tgatgcgaaa catccggcag aatctattct tcgcgttcat
     3241 ctacaatgcg ctcggcgtac cgatcgccgc cggtgttctt tatccgctgt ttggcattct
     3301 tctaagcccg atgatcgctg gcgcggcgat gagctttagc tcggtttcag tgatcgcgaa
     3361 cgcattacgc ttgcgaacgg tcaaactgta gccgcttcgg tgtgcgaagc gcgtattcgg
     3421 tcgctcctcc cggtgcgccc aaacgccgcc cgcagggcgg cggctacaag caagccaagc
     3481 gcttgcccta caacgattcg tccagcagtt ttcggggtaa caaacttcaa cgtgcaagcc
     3541 tatgactaca cgacccgcgt tctcagtatt cgttgcactt cttcttgcac ccgttgtgtc
     3601 gctccttgcg caggaccatc caagagctcc gcagcaatcc caatcgcagc aactgccgcg
     3661 gaccggagga ggcgctcctc gagctgcaat gacggaagca actatgtcag acgtttctga
     3721 cggactaaag aaattcatca gcggttacgc tgcgaaatcc tccgacaaca aatttcatat
     3781 cccatatcag cgtaaagatc tcgcgctcga cttggtcaaa ctccacgacg atcggttctc
     3841 gaatcttggc ggcgataaat atttcgcctg tgtcgacatg aaaggcgccg acgggaaaat
     3901 ttacgacatc gatttcttta tggtggtaaa gcccggcaaa ttaaccgtga cggaaacatc
     3961 cgttcacaag atcaacggca aagcccttta caactggaag caggaaggcg gcgtttggaa
     4021 gaaagtgaag gcttcctgaa gacgcgccca tgagcgtcgc ctagcggcga tatgctttag
     4081 cgccaacggc gcaaattcat gccagcctgg ggcatcgccc caggaatggt gccatttttc
     4141 tacaaccagc gctgcaaagc gcgattcaaa ccgacaatta ggggtataaa aaccaaatga
     4201 gtcgcgcttt cagcgctttg agctggcaat cacatcaaac ctggggcgtt accccaggct
     4261 aaccaagtga ttgccgcgcc ttcggcgcta atcgtattcg aatcacgagc gcacgtcctg
     4321 tagcggcggt ctctgaccgc cgacgtttgg agtcacagac tcccgctaca gatgagacag
     4381 caatgtcgaa cacctttttc atcactacgg cgattgatta cacgaattag tccctttcag
     4441 attggaccta tgtcgtaaag gacttgtcca gtaactcctg gattttcttt tcaagaagat
     4501 tataaccggg ttcccctttg aaaaacgctc ctcccggatg gacatgtcgg attacaccgc
     4561 gtcgatcgag aaggaaggtg acggaggtcc agccgcgatc gtgtttgtcg agccaccaac
     4621 ggcgcagcgt tttccaatct ggatcaattg ccaccgggaa ctcaaagccg aatttgcgag
     4681 actgtctttt cacattggcc acacttagag gctctgatga cttatgatgg taaaatccga
     4741 cgacaagcaa tccgcggcta ccgtaacgct tccagaagtc attaagagcc ggtgcgctgg
     4801 cttcacaaaa cgcacagccg ggcgccgtcc accagcgcac cagcaccact ttgccgcgga
     4861 gcgcgtctaa ctccagcggt tctgaattga tccaatcgcg ggctgtccaa ccgcctgggc
     4921 ggatgccgat cagggcatta ccttcattca acggagcaga gaaggcctca acgccgccaa
     4981 gcgacggtgg gcggtcagct aattgcgcct gcgctgcagc gtctaaccac atgccgggta
     5041 tcaaccctgt aattaatggg atagccaaag ttgcactcat ccacctgcac agcatcgtca
     5101 cattctacac ctaagagtc
//
LOCUS       DATDAJ010000186         3591 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1099082, whole genome shotgun sequence.
ACCESSION   DATDAJ010000186 DATDAJ010000000
VERSION     DATDAJ010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1099082"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..1517
                     /locus_tag="VIS53_04565"
     CDS             183..1517
                     /locus_tag="VIS53_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEY5767088.1"
                     /translation="MKPSPMEMTARKVAARVREHGHIAYFAGGCVRDMVRGLTPKDYD
                     IATDARPETVQALFPRTYAVGAHFGVIIVLEDGFQFEVATFRSDDAYIDGRHPSAVHF
                     SSPEADAKRRDFTINGMFYDPVAGEVIDLVGGQTDIGAKLVRAIGDPAKRFAEDRLRM
                     LRAVRFAAVLDYQIDKGTWDALVANAPSINQISAERIRDELVRIFLSPNRVRGWDMLD
                     ASGLMRAILPELDAMKGVLQPEQFHPEGDVFVHTRLMLSLLPETVSVPLVFAVLFHDV
                     AKPVTARVDKTGRIRFNEHDRIGAHMTEAIMRRLRFSGAEIEAAVEMVRQHMVFKDTP
                     KMRVAKLKRFMARPTFKEELELHRVDCESSHRMLDNYEFLLRKREEFANEPIIPPPLV
                     RGDDLIALGFQPGPEFGEILEAVETRQLEGNLRTADEALEWVKERYLPGKQN"
     gene            1542..2993
                     /locus_tag="VIS53_04570"
     CDS             1542..2993
                     /locus_tag="VIS53_04570"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HEY5767089.1"
                     /translation="MRILMSSAEGPPMQRTGALVDVMDALPGALRDRGHEVSVALPFY
                     REIRENRAFKKKDTGITVEVQLGDTAHVARYLEGRSTTGVQLFFIRCDEFFDRAGIYG
                     ERGKPYDDNAARFIFFCKATLELARRLTPQLEILHLHDWAPALVPVFVHAHGLPFSTV
                     LTIHHVADQGSFWGLDFDLTNLPEQFFTLHGVEFFGRLNFLKSGILYADRTTTVSEHY
                     RREILTPAGGSGLDGVLRENAHRLTAILDGVDYTRWNPASDRLLPARYEARRLRGKGV
                     CREALLKQMNLAAAPGGPVFGMVTRVVQEKGFEILVPLLDRLLWDDVRLLILGEGDPA
                     FETALAVTARKFPTKFAYQKDYDEKLAHLIQAGMDISLIPSRFEPAGLGAMYNLKYGA
                     LPVARVTGGIQEIIEDYDPTTDSGYGFLCYEYSSDAFWDAMKRARQIFCDQDLWMGLM
                     KRAMARNFSWDASAQRYEALYSELVGAPDKAAV"
     gene            3332..>3591
                     /gene="rplU"
                     /locus_tag="VIS53_04575"
     CDS             3332..>3591
                     /gene="rplU"
                     /locus_tag="VIS53_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY5767090.1"
                     /translation="MAYAIIKTGGRQFRVAEGDTIDVDLLDVEPGKTATFGDVLLFAD
                     GKDVSHGNPLISGVNVTAEVVEQRKDKKVVAFKYKRRKGYHRT"
BASE COUNT          773 a          947 c         1081 g          790 t
ORIGIN      
        1 gtattttcgc ggcgcaaggg ctgaaggcgc gactcacatg tggtctgaat cgcgccttca
       61 gcgctgggtg ttgccacata tttgctccta ggacgttgtc ccaggctgga gttgagtcgc
      121 gccttcggcg ctgaatgaca cgttgattgc gcttcgcaca gcgaagcggc tacagtggtc
      181 gtgtgaaacc ttcgcccatg gaaatgaccg cgcgtaaagt tgcggcgcgc gtgcgtgagc
      241 atgggcacat cgcgtacttc gcaggcggtt gcgtgcgcga catggtgcgc ggtttaacac
      301 ccaaggatta cgacatcgcc actgacgcgc gtcctgagac tgtgcaggcg cttttcccgc
      361 gcacgtacgc ggtcggtgcg catttcggcg taatcatcgt gctggaggac ggctttcaat
      421 ttgaggtagc cacgtttcgc tccgatgacg cttatatcga cggcaggcac ccaagcgcgg
      481 tgcatttttc ctcgccggaa gcggatgcaa agcgacgcga tttcaccatt aacggaatgt
      541 tttacgatcc ggtcgcgggc gaggtgattg atcttgttgg cggccagacc gacatcggcg
      601 caaagttagt ccgcgcaatt ggcgatccgg cgaaaagatt cgcggaagat cgtttgcgca
      661 tgctccgggc ggtgcgcttc gccgcagtgc tcgattacca gatcgataaa ggaacctggg
      721 acgcgctcgt ggccaacgcg ccttcgatta atcaaatcag cgcagaacga attcgcgacg
      781 agctggtgcg gatttttttg tcgccgaatc gggtgcgcgg gtgggacatg ctcgacgcca
      841 gcggcctcat gcgcgcgatt ttgccggagc tcgatgcgat gaaaggcgtt ttgcagcccg
      901 aacaatttca ccccgaaggc gacgtcttcg tacacacgcg gctgatgttg tcgctgctcc
      961 ccgaaacagt ttccgttccg ctggttttcg cggtgttatt tcacgacgtg gccaagccgg
     1021 tgaccgcgag agtggataaa acgggccgca tccgtttcaa cgaacatgac cgaatcgggg
     1081 cgcacatgac agaggcgatc atgcggcgcc tgcgattctc aggcgctgaa attgaagcgg
     1141 cagttgaaat ggtcaggcaa cacatggttt tcaaagacac gccgaagatg cgagtggcca
     1201 aattgaaacg attcatggcg cgaccaacgt tcaaggagga actggagctg caccgggttg
     1261 attgcgaaag cagtcatcgc atgctggaca attacgaatt tttgctgcgc aaacgcgaag
     1321 aatttgctaa cgaaccgatc attccgccgc cattggtgcg cggtgatgat ttgatcgcgc
     1381 tcggctttca gcctggcccg gaatttggcg agatcctcga ggcagtcgag acgcgacaac
     1441 ttgagggaaa tcttcgcacg gcggatgaag cgcttgagtg ggttaaagaa cgatatttgc
     1501 caggcaaaca gaattaagca acgtcaagca gcgaaggcca aatgagaatt ctgatgagca
     1561 gcgcggaggg gcctccgatg caacggacgg gcgcgctggt agatgtaatg gatgcgttgc
     1621 cgggcgcact gcgcgatcgt ggccatgagg tcagcgtggc gctgccgttc tatcgcgaga
     1681 ttcgagagaa tcgcgcgttt aagaagaagg acaccggtat aactgtcgag gtacaactcg
     1741 gcgacacggc ccacgttgcg cggtatctcg aaggccgaag caccactggc gtgcagctgt
     1801 tctttatccg ctgcgatgaa ttttttgatc gcgctggaat ttacggagag cgcggcaagc
     1861 cgtacgacga caatgccgcg cgattcattt ttttctgcaa agcaactctc gagctcgccc
     1921 ggcggttgac accgcaattg gagattctgc acctgcacga ttgggcgccg gcgttggtac
     1981 ccgttttcgt gcatgcacat ggactacctt tcagcacggt tctgaccatt caccacgtcg
     2041 ctgatcaggg cagcttctgg ggactcgatt ttgacctaac gaatttgccg gagcaattct
     2101 ttacgcttca cggcgtagag tttttcggac ggctaaattt tctcaaaagc ggcatacttt
     2161 acgccgaccg aaccacaacg gtcagcgagc actaccggcg cgaaatcctg acaccggcag
     2221 gtggatccgg cctggatggc gtgttgcgcg aaaatgcgca tcgcctcacc gcaattttgg
     2281 atggcgtaga ttatacgcgc tggaatccgg cgtccgatcg tttgcttccc gcgcgttacg
     2341 aggcgagacg cctccgtggg aaaggagtct gtcgtgaggc gctcctgaag caaatgaacc
     2401 tcgcggctgc gccgggcggt ccggttttcg gcatggtaac tcgtgtggtc caggaaaaag
     2461 gcttcgaaat cctcgtgccg ctgcttgatc ggctactctg ggacgatgtt cgtttactca
     2521 tcttgggcga aggcgaccct gcgtttgaaa ccgcacttgc agtcacagcc agaaaatttc
     2581 caaccaagtt tgcttaccaa aaagactacg acgagaagct ggcgcacttg attcaggcgg
     2641 gcatggacat cagcctgatt ccatcgcgct tcgaaccggc aggcttaggc gcgatgtaca
     2701 acttgaaata cggcgcactg ccggtcgcgc gcgtgaccgg tggaattcag gagatcatcg
     2761 aggattacga tccgacaacg gacagcggtt atggtttttt gtgttacgaa tattcaagcg
     2821 acgcgttctg ggacgcgatg aaacgggcgc gtcaaatctt ctgtgaccag gacctttgga
     2881 tggggctgat gaaacgcgcg atggcccgca atttttcgtg ggacgcgtct gcgcagcgtt
     2941 atgaggctct atattcggag cttgtcgggg cgccggataa agctgctgtg tagcgccaaa
     3001 ggcgcaattc actgcgagcc tggggcagcg ccccaggaat cgtgaatccc gcagagggcc
     3061 agcgctgaaa gcgcgattca ccacttttgg cccatcgttg gcgtatcctc cggagccatt
     3121 caaccgggat gtttgggatt gagaaagtgc ccctgattcg cgctttcagc gcttgagatc
     3181 tgcgcaattg tttccttggg cggtgcccaa ggctgtcgat gagacagcgc ctttggcgct
     3241 aaaacttcga acagcgcttg cctcgacgtt tccgtttgcc aagcgcgctt agatgtggaa
     3301 ttgtgggcgg ctttttctcc ccagaaaaac tatggcttac gcaatcatca aaactggcgg
     3361 caggcaattt cgcgtcgcgg aaggtgacac tatcgatgtc gatcttctcg acgtcgaacc
     3421 gggcaaaact gccacgtttg gtgatgtatt gttgtttgcc gacggaaaag acgtgagtca
     3481 cggcaacccc ttgatctccg gagtcaacgt gactgcggaa gttgtcgaac aacgcaagga
     3541 caaaaaggtc gtcgcgttca aatacaagcg gcgcaagggt tatcaccgca c
//
LOCUS       DATDAJ010000187         3978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1100295, whole genome shotgun sequence.
ACCESSION   DATDAJ010000187 DATDAJ010000000
VERSION     DATDAJ010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3978
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1100295"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1501)
                     /locus_tag="VIS53_04580"
     CDS             complement(116..1501)
                     /locus_tag="VIS53_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767091.1"
                     /translation="MEAETPKRPGRYELWIAIAISLLAAVAFYFSTNPTLHDLDYTFE
                     IASAFLRGELGLREKPPEWLNEMIPYGNKYYSAFPLGAVFSMVPVALLQKASLIDNFP
                     ARILAALIAGACVYFFFQLAKAFGPDYSSLKPKPLVRRILLALFPVFATWTWCNLGMG
                     GAWQIALGLALLGETAALYFTLARPSPFIAGAFFTLAFGNRTELLLTAPFYVYLFWRR
                     PVFVRQAHLPAVAFAKAGPLPEPGEQNDYPATSVSSASGLEAPAAAPVRWKNLKEALR
                     VNAPTVFDFLILPVTLALLTGAYNLARFHSIGDFGYFHIPEVRDEPWYAHGLFSIHSI
                     PWNMNKMIFEGFRDDPNFPFLSFPPFGCSIFLTTPLLFLLFRAGGRYRVISWIAIGIM
                     TFVLWCHGNPGGWQFSYRYAMILLPWMFLLLTGNGPPRITVTEVSLFAVSVAINGIAT
                     WLFLWTDTIQP"
     gene            complement(1501..2223)
                     /locus_tag="VIS53_04585"
     CDS             complement(1501..2223)
                     /locus_tag="VIS53_04585"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEY5767092.1"
                     /translation="MTERLMDLPVKIFADGADLLGIAELSRQPYIHGLTTNPTLMRKV
                     GLTDYESFAKAVLKEVKSKPISFEVFSDDFAEMRRQALKMHEWQDNVYVKIPITNTSG
                     ESSVPLIERLAGEGVKLNITAMLTPRQVTAVAAVLNPSIPSILSVFAGRIADTGVDPL
                     PIMKESLQIVRALPKGELLWASVREVLNVFQAAACSCHIVTVPHDILKKLLELGGKDL
                     DELSLDTVRMFHRDAVSAGFKL"
     gene            complement(2268..2831)
                     /locus_tag="VIS53_04590"
     CDS             complement(2268..2831)
                     /locus_tag="VIS53_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY5767093.1"
                     /translation="MGKHELARRAVFLDRDGVINRVVVRNGMPYPPSHVEEFELYEDV
                     PDGCARLKAANFLLVVITNQPDVGRGTQSREAVEAMNLKMQSALPLLDRIEICYHAGE
                     RYGQPCGCRKPRPGLILRAVAELNIDPKRSYVIGDRWRDVDCARATGCRAIFIQRGYK
                     ETLREAPDFTVANFSDAVSAVLRDSGL"
     gene            complement(2813..3409)
                     /locus_tag="VIS53_04595"
     CDS             complement(2813..3409)
                     /locus_tag="VIS53_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEY5767094.1"
                     /translation="MSYSKQHLREATEIIAKLDPALCEKAVELLAAVRARGGRLFILG
                     VGGSAANASHAVNDFRKLAGIEAYAPTDNVSELTARTNDDGWPSVFAEWLKGSRLNEK
                     DAILVLSVGGGSLEKNVSPNLVSALQLAKERSSAILGIVGRDGGYTAQVADVAIVIPT
                     VNSANITPHTEAFQAVVWHLWISHPTLKIGETKWESMN"
     gene            complement(3406..>3978)
                     /locus_tag="VIS53_04600"
     CDS             complement(3406..>3978)
                     /locus_tag="VIS53_04600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase"
                     /protein_id="HEY5767095.1"
                     /translation="RKIVLCVGYLGEMIEAKIGNGNRLGLQIDYSFDGPTLLGTGGAL
                     KRAISKLGEHFLVVYGDSYMPVDYAAIMEAFVPSEKPALMTVFENEGRWDASNVWFET
                     GEIHRYDKKVRTPQMRHIDYGISVLTAGVFAGFADNMPFDVADLYSRLVSEKQMAAYE
                     VKQRFYEIGSAEGLAELDALLRKNTVSVSP"
BASE COUNT          960 a         1076 c         1080 g          862 t
ORIGIN      
        1 actttcaccg gctgatgatg tcgatttttg ttccagcgtc aatcagagcg cgtcgagagg
       61 gcagtttaat tgatcaccga tcagtcttca cccggggaag aaaccacggg tggaattacg
      121 gttgaattgt atcggtccaa agaaataacc acgtcgctat cccgttaatc gcgaccgaca
      181 cggcgaaaag tgagacttcg gtgacggtta tcctgggcgg tccgttgcct gtgagcaaaa
      241 gaaacatcca cggaagaaga atcatggcgt agcgataaga gaattgccac ccgcccgggt
      301 ttccatggca ccagagcacg aatgtcataa tcccaatcgc aatccacgat atgacccggt
      361 atcttccgcc ggctctaaaa aggaggaaaa ggagcggagt ggtgagaaaa atagagcacc
      421 caaatggtgg aaaactaagg aacggaaagt tgggatcatc ccggaaacct tcgaatatca
      481 ttttgttcat gttccacgga atggagtgga tcgaaaacag cccgtgtgcg taccaaggtt
      541 cgtcgcgcac ttcagggata tgaaagtagc caaaatcgcc gattgaatga aaccgggcca
      601 aattataagc accagtcagc agtgccaaag ttactggcag aattaaaaaa tcgaaaactg
      661 ttggtgcgtt cacacgaagc gcttccttaa ggtttttcca acggaccggt gccgcggccg
      721 gagcctccaa acctgacgct gacgacacag atgttgcagg gtaatcattc tgttcgccgg
      781 gctccggcag gggacccgcc ttcgcgaagg ctacggcggg caagtgcgcc tgccgtacaa
      841 acacaggacg tcgccagaaa agataaacgt agaaaggtgc tgtgaggagg agctcggttc
      901 gatttccaaa agcaagagtg aagaacgccc cggcgatgaa cggcgacggt cgggccaatg
      961 taaaatagag cgctgcggtt tctcccaata acgcgagacc gagagcgatt tgccacgcgc
     1021 cgcccatccc gaggttacac caggtccagg ttgcaaatac tgggaacagc gccaacaaaa
     1081 ttctccgaac gagcggtttt ggtttgaggc tggagtaatc gggtccgaat gctttcgcga
     1141 gttgaaagaa gaaataaacg caggctccgg cgatcagcgc agccagaatg cgagccggaa
     1201 aattgtcgat cagtgacgct ttttgtagca gtgcaacggg caccatgcta aacacggcgc
     1261 ccagcggaaa cgcggaataa tatttattcc cgtacggaat catctcgttg agccactcgg
     1321 gcggcttttc gcggaggccg agttcgccgc gcaggaatgc tgaagcgatc tcgaaggtat
     1381 aatccagatc gtgcagcgtg ggatttgtag agaaatagaa ggccacagct gcgagcaacg
     1441 agatggcaat cgcaatccaa agctcgtacc gccccggcct tttgggtgtt tcggcctcca
     1501 tcagagcttg aaaccggcag agacggcatc ccggtggaac atgcggacgg tatcaagaga
     1561 gagttcgtcg agatctttgc ccccgagttc gaggagtttt ttcagaatgt cgtgcggcac
     1621 cgtaacgata tgacaactgc aggccgcagc ttggaaaacg ttaaggacct cacgaacgct
     1681 cgcccagagg agttcgccct tcggcaaagc ccgcacgatc tggagtgatt ccttcattat
     1741 cggcaacggg tccaccccgg tatcggcgat ccgtccggcg aagaccgaca gaatcgatgg
     1801 tatgctcgga ttcagcacgg cagcgacggc tgttacctga cgcggcgtta gcattgccgt
     1861 tatatttagc ttcacgcctt caccggctaa tcgctcgatc aatggaacag aggattcgcc
     1921 actggtgttg gtgatcggga ttttaacata aacgttgtcc tgccactcgt gcattttgag
     1981 tgcttgccgg cgcatctctg cgaaatcgtc ggagaagact tcaaatgaga tgggtttaga
     2041 tttcacttct ttcaagactg ctttggcaaa gctttcataa tcggtcagac cgacttttcg
     2101 catcagagtc ggatttgttg tcaggccatg gatgtagggt tggcgcgaaa gctccgcgat
     2161 ccccagaagg tccgcgccgt ccgcgaagat tttcacgggc aggtccatca agcgttcagt
     2221 catccctttc agcctactca acggccaccg ccaaatgcaa gcagttctca gagacccgag
     2281 tcgcggagaa cggcgctcac ggcatcgctg aaattcgcga cggtaaaatc aggcgcttct
     2341 cgcaaggttt ccttgtaacc gcgctggata aaaatcgcgc gacaacctgt ggcgcgcgcg
     2401 caatcaacat cgcgccagcg atcgcctatg acgtaactcc tttttggatc aatgttcagc
     2461 tcagcaactg cgcggagaat cagacctggt cgcggcttac ggcaaccgca cggttggccg
     2521 taacgctcgc cggcgtggta gcaaatctca atacgatcaa gtaatggaag cgccgattgc
     2581 attttcagat tcatcgcttc aacggcttcg cgactctggg tgccgcggcc aacgtcgggc
     2641 tggttggtga tgacaaccag gagaaagttc gcagctttaa gccgcgcaca tccgtcggga
     2701 acatcctcgt aaagctcgaa ctcctcgacg tgagatggag gataaggcat tccgttacgg
     2761 acaacgaccc ggttgattac tccgtcgcga tcgagaaaga ctgcgcgtcg cgctagttca
     2821 tgctttccca tttcgtttcg ccgattttga gagtgggatg cgaaatccac aaatgccaca
     2881 ccacggcttg gaatgcctcg gtgtgcggcg tgatgtttgc ggaattgact gtcgggatga
     2941 caatcgccac gtcggcaacc tgcgcggtgt atccgccgtc gcggcccacg atccccagga
     3001 tcgcgctact tcgttccttc gcgagttgca gcgcgctcac caaatttgga ctcacattct
     3061 tttcaaggct gccgccgcct accgacaata caagaatcgc gtctttttca ttgagtcggc
     3121 ttcctttaag ccattcggcg aaaactgagg gccatccatc atcgttcgtg cgtgcggtca
     3181 gctccgagac gttatcggta ggggcgtacg cctcgatccc tgcgagcttg cggaaatcgt
     3241 tcaccgcatg ggaagcattc gccgcgctgc ctcccacgcc gagaatgaaa agccggccgc
     3301 cgcgcgcgcg cactgcagcg agtaattcca ccgctttttc gcaaagtgcc gggtctagct
     3361 tcgcgatgat ttcggttgcc tcgcgcaagt gttgttttga atagctcatg gagaaacgga
     3421 aactgtgttc ttgcgcaata gcgcatcaag ttccgcaaga ccctccgccg agccgatctc
     3481 atagaaccgt tgtttcactt catacgcagc catttgtttc tcggatacga gacgcgagta
     3541 cagatcggcc acatcaaatg gcatattgtc ggcaaagcca gcgaatactc ctgcggtcag
     3601 aacgcttatg ccgtaatcga tgtgccgcat ttggggtgtg cgcactttct tgtcatatcg
     3661 atgaatttcg cccgtttcga accaaacatt gctcgcatcc cagcggcctt cgttctcgaa
     3721 cactgtcatc aaagccggtt tctcgctggg aacgaaagct tccatgatcg cggcgtaatc
     3781 gaccggcatg tatgagtccc cataaactac cagaaagtgc tcgccgagct tggaaatggc
     3841 gcgcttgagc gcaccgcccg ttccgagaag cgttggccca tcgaacgaat aatcaatttg
     3901 caagccaagt cggtttccgt tgccaatctt cgcctcaatc atctcaccga gatagccgac
     3961 acatagtacg atcttacg
//
LOCUS       DATDAJ010000188         6156 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1103268, whole genome shotgun sequence.
ACCESSION   DATDAJ010000188 DATDAJ010000000
VERSION     DATDAJ010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6156
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1103268"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /gene="map"
                     /locus_tag="VIS53_04605"
     CDS             complement(<1..682)
                     /gene="map"
                     /locus_tag="VIS53_04605"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEY5767096.1"
                     /translation="MIPIKNAREIDKMRRACRTASDILDRVSDLIRPGITTKEVDESA
                     ADFMSDAAVKSAFLGYRLGHREFPGNICISLNDEVVHGIGSQRRIQYGDVVKLDIGII
                     QDGWVGDNATTVPVGIIDERTDQLLRATENALARAISVANEGRRVGDICAEIEDEARR
                     YGFSVVREFVGHGVGRKMHEEPQIPNYGKRGSGPKLKAGMTLAIEPMINIGTSDVRLL
                     DDGWTVCTA"
     gene            complement(679..1338)
                     /locus_tag="VIS53_04610"
     CDS             complement(679..1338)
                     /locus_tag="VIS53_04610"
                     /EC_number="2.7.4.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050145 - nucleoside monophosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HEY5767097.1"
                     /translation="MKRRLVLLGPPGSGKGTQAEMITRHFGIPVTSPGAILRRERDLG
                     TPLGQETAEVLRSGGLVSDKIIIELIEDWLRLHGGHGFVFDGFPRTLPQAESLMSMLT
                     KLRTALDLAIWLEVSEETVRDRITGRLQCGECGFTTSSSSAQFANRPVCPYCDGRLER
                     RNDDDLGVLQTRLQEFHTKTEPLGAFYKKLSILHRIDGNRERDEVFADISKLIEDKTV
                     K"
     gene            complement(1339..2844)
                     /gene="secY"
                     /locus_tag="VIS53_04615"
     CDS             complement(1339..2844)
                     /gene="secY"
                     /locus_tag="VIS53_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY5767098.1"
                     /translation="MISAFLNTVKIPELRRRIFFTLAVIVLVRLGAAITTPGVNQGVL
                     QEWFRTSLEQRTGGGLAALFNLFSGGALENCAVFSLGIMPYISASIMMQLLTAVIPRL
                     GRLAREDGGRQKIMQLTRYTTLVLCIFQGYLLALSFQHPESYHTMLPGITDTIRQLGV
                     PLVDDLGWKFRIVTVVSLTTGTLVLMWLGDQITERGIGNGISLIITIGIVARLPAALV
                     QAWKTFVPSGQGASQVNPMVLVLLVLVLIFVIAAVIAITQGVRKITVQYAKRVVGRKM
                     YGGQTQYMPLKVNYAGVMPIIFAWALLLFPATIVSYGFQNSPTANRIAAALSTGWPHY
                     VALAAMIFFFSYFWVATQFQPTQIADDLKKYGGYIPGVRPGKPTADFLDYTMTRLTFA
                     GAIFLTLIAVFPSLLSQWLNVPVITAQFFGGTSLLIIVGVMLDTMRQVETHLIQRHYD
                     GFLRKGRIRGRSFDRAAYARGESVGSGTLIWFGVGIAVLVIAGVAIFLYGR"
     gene            complement(2979..3407)
                     /gene="rplO"
                     /locus_tag="VIS53_04620"
                     /pseudo
     CDS             complement(2979..3407)
                     /gene="rplO"
                     /locus_tag="VIS53_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016911111.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
     gene            complement(3394..3957)
                     /gene="rpsE"
                     /locus_tag="VIS53_04625"
     CDS             complement(3394..3957)
                     /gene="rpsE"
                     /locus_tag="VIS53_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003328273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEY5767099.1"
                     /translation="MNHTHSGRRPDSRRQERASTAKGDTSEKVVFINRCAKVVKGGRR
                     FSFSALIVAGDHDGRVGYGFGKANEVSEAIRKASEAARKGMEKVSLNENTIPHEVLGE
                     FDGARVLLRPASPGTGIIAGGGVRAVAEAAGIRDVLAKSLGSSNHANVVKATIAALRS
                     LRRKDQIFKLRGITSRDGRGESHDAAS"
     gene            complement(3962..4324)
                     /gene="rplR"
                     /locus_tag="VIS53_04630"
     CDS             complement(3962..4324)
                     /gene="rplR"
                     /locus_tag="VIS53_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_026114014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEY5767100.1"
                     /translation="MATFRKAARQRIHRRIRKKVAGTAQRPRLAVHFSGKHIYAQVID
                     DDAGRTIAAASTAESSLLGETKAHANQAAAERIGKAIAERSLERKLERVVFDRGGFRY
                     HGKMKALADAARAGGLKF"
     gene            complement(4327..4866)
                     /gene="rplF"
                     /locus_tag="VIS53_04635"
     CDS             complement(4327..4866)
                     /gene="rplF"
                     /locus_tag="VIS53_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY5767101.1"
                     /translation="MSRIGNKAVEIPDKVKVNVGDGGQVSVEGPKGKLQWTLPREIMA
                     SVQDNRVSVVRQAETRSAKALHGLSRSLVYNMVQGVSEGFTKQLEIEGVGFRAAVQGS
                     NLNLSLGFSHPVAFAIPKDIKITVADNTKITIQGVDKKLVGQVAADIRGFYPPEPYKG
                     KGVRYAGEQIRRKEGKTVQ"
     gene            complement(4903..5301)
                     /gene="rpsH"
                     /locus_tag="VIS53_04640"
     CDS             complement(4903..5301)
                     /gene="rpsH"
                     /locus_tag="VIS53_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY5767102.1"
                     /translation="MSTVTDPIADFLARVRNGVRAQKPEVLIPYSKIKAEIARIFKEE
                     GYISDYSVDTSGAHPRIKVINKLVDRSSAIAGLRRVSRPGLRRYVGADEIPRVLGGMG
                     LAILSTSRGILSGREARKQKVGGELLAYVW"
     gene            complement(5309..5881)
                     /gene="rplE"
                     /locus_tag="VIS53_04645"
     CDS             complement(5309..5881)
                     /gene="rplE"
                     /locus_tag="VIS53_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003638072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY5767103.1"
                     /translation="MENEFRRHYKEHVMPALQKRHGYKNAHQIPKVEKVVINTSVGSQ
                     SDVKQALEEAKAELALITGQRPMETLAKKSISNFKLRKDQAIGAKVTLRGERMYEFLE
                     RFIKAALPRIRDFRGVSPRCFDKNGNYTIGVSDQSIFPEVELDKIKRNIGFDVTIVTT
                     ARTDEEAKSLLSEMGMPFSDRAKKPAAQAA"
     gene            complement(5897..>6156)
                     /gene="rplX"
                     /locus_tag="VIS53_04650"
     CDS             complement(5897..>6156)
                     /gene="rplX"
                     /locus_tag="VIS53_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY5767104.1"
                     /translation="NFRGSSGRVLAVFAGKQRVLVEGVRIIKKHLRKSQDNPSGKIAE
                     REGPIHISNVRLLEREKSEKGGKSEKGKKGKHAERSGATPK"
BASE COUNT         1278 a         1861 c         1573 g         1444 t
ORIGIN      
        1 ccgccgtgca tactgtccag ccatcgtcga gtaatcggac atcggacgtg ccgatgttaa
       61 tcatcggctc aatcgcgagc gtcatccccg ctttcagttt tggtccgctg ccgcgtttgc
      121 cgtaattcgg gatttgcggc tcctcatgca ttttgcgccc gacgccgtgc ccaacaaatt
      181 cgcgcaccac cgaaaaacca tatcggcgcg cttcatcctc aatttcggcg cagatgtccc
      241 ccacgcgccg gccttcatta gcaacgctga ttgcgcgcgc gagcgcgttt tcggtcgcgc
      301 gcagcaactg gtccgtgcgc tcatcgatga ttccaaccgg cacagttgtg gcgttatcgc
      361 caacccaacc atcctgaata atgccgatgt cgagcttcac gacgtcgcca tactgaatac
      421 gccgctggct gccaatacca tggaccactt cgtcgttaag ggagatgcaa atgttcccgg
      481 gaaactcgcg atgccccagc cgataaccga gaaacgcgct cttcacagct gcgtcgctca
      541 tgaagtccgc ggctgactca tccacttcct tggttgtaat tccagggcga atgagatcgc
      601 tgacccggtc gagtatgtcg ctggctgtgc gacaagcccg ccgcatcttg tcaatttccc
      661 gggcgttctt gatcggaatc atttcaccgt cttgtcctcg atcaattttg agatgtcggc
      721 aaacacttca tcgcgctcgc ggttcccgtc gatacgatgc aaaatcgaca gctttttata
      781 aaaggctccc aacggttcgg tcttcgtgtg gaactcttgt aaacgtgttt gcaacacgcc
      841 cagatcatcg tcgttgcggc gctccaatcg gccgtcgcaa tacggacaca cgggacggtt
      901 agcgaactgt gcgcttgacg aactcgtcgt aaaaccgcac tcgccgcatt gaagccgacc
      961 ggtgatgcga tcgcgcacag tctcctccga tacttccagc cagatcgcca gatccagcgc
     1021 tgtgcgtaac ttcgtcaaca tcgacatcaa actttcagcc tgcggcaatg ttcggggaaa
     1081 tccgtcgaag acgaacccgt ggccgccatg caagcgcaac cagtcctcga tgagttcgat
     1141 gatgatcttg tccgagacca gtccgccgct gcggagcact tcggcagtct cctgcccgag
     1201 cggcgtccct aaatcgcgtt cacggcgcag aattgccccg ggtgaagtca cgggaatgcc
     1261 gaagtgccgc gtaatcattt ccgcctgagt tcctttgccg gaaccgggcg ggccgagaag
     1321 aacaagccgc cttttcacct atcgcccata aagaaagatc gcgaccccgg cgatcacgag
     1381 cacggcaata cccacaccaa accagatcaa ggtgccactg cccaccgatt cgccgcgcgc
     1441 gtaggcagcg cgatcaaacg agcgcccgcg gattcgcccc ttgcgcaaaa atccatcgta
     1501 atgccgctgg atcaggtgcg tctccacttg ccgcatggta tcgagcatga cgcctacaat
     1561 gattaacagg cttgtgccgc cgaagaattg agccgtgatc acgggcacat tcaaccattg
     1621 gctaagtaaa cttgggaaca ccgcgatcag cgttaaaaag attgcgccgg caaaagtcag
     1681 gcgcgtcatg gtgtaatcga ggaagtcggc agtcggtttt cccggtcgga ctccggggat
     1741 gtagcctccg tattttttaa ggtcatcagc gatttgggtg ggttgaaact gcgtggcgac
     1801 ccagaagtaa ctgaagaaga aaatcattgc cgcaagagcg acataatgcg gccacccggt
     1861 cgaaagcgct gcagcaatgc gattggcggt gggactgttc tggaagccgt agctcacgat
     1921 cgttgcaggg aacaagagca gcgcccacgc aaagatgatc ggcatcacgc cggcataatt
     1981 cactttcaaa ggcatgtatt gcgtttggcc gccgtacatt ttccgcccca ccactcgctt
     2041 cgcgtactgc acggtaatct tacggacgcc ttgcgtaatc gcgatcactg cggcgatgac
     2101 aaagatgagg accaacacga gcagcaccag caccatcggg ttcacctgac tcgctccctg
     2161 ccctgatgga acaaaagtct tccacgcctg caccagcgca gcgggcaacc gcgcaacaat
     2221 ccctatcgtg atgatgagag agatgccgtt gccgataccg cgctcggtaa tttgatcgcc
     2281 caaccacatc aaaaccaatg tgccggtcgt tagggagacc accgtgacga ttcggaattt
     2341 ccaaccaaga tcgtccacca gcggcactcc aagttgcctg attgtgtcag taattccggg
     2401 cagcatcgtg tgatacgact ccgggtgttg aaaggagagc gccagcaagt aaccttggaa
     2461 aatgcacagc actaatgtcg tgtagcgcgt caactgcatg atcttctggc gcccgccgtc
     2521 ttcgcgcgcc aacctgccga gtcgcggaat cactgcagtc agcagctgca tcatgattga
     2581 cgcgctgatg tacggcatga ttccgagaga aaagaccgcg cagttttcca gcgcgccgcc
     2641 actaaacaaa ttaaacagcg cggccagacc gcctccggtg cgctgctcca gcgaagtgcg
     2701 aaaccattct tgcaaaacgc cctgattcac gcccggtgtc gtgatcgcag cgcccaaacg
     2761 cacaagcaca atgacggcca gcgtaaagaa aatgcgccgg cgcagctccg gtatcttgac
     2821 ggtatttagg aacgccgaaa tcattcgcgt ttcttgttgc gcgatttcgt ttttctaacc
     2881 cgcggcttag ctgtcgcgac agccgcgtcc ggctccgctt ccgacgaagc aacgtctgtt
     2941 tggttttttc cagcgctgcg cgcttcacgc agcgtgacag ttccaccggc cttttcaatt
     3001 ttttcgcgcg cgctcgcact gattttgtcg atttgcactt ggaggtcgtg cttcaactcg
     3061 ccctcgccga ggattttgat ccccgcaaaa tgacctcgga tgagattcga ttcgcgcaat
     3121 aattgttcgt ttacaactgt gccggcctta aatgcgttga ggtcactcac gttcacaaca
     3181 gcgtaatgct tatgaaatgc tgcattatta aatccgcgtt tcggcaatcg tcgaatgagc
     3241 ggcatttgtc cgccttcaaa gccgagccgg atgctcccac ccgagcgcgc tttttgccct
     3301 ttgtgcccct tcccgctggt tttcccgtgt cctgagcttt cgccgcaacc gaggcgttta
     3361 acgcggtggc gcgagccggg acgagggcgc aaattatgaa gccgcatcat gtgactcacc
     3421 tcttccatcg cgggacgtaa tcccgcgcag tttaaaaatt tgatccttgc ggcgaagcga
     3481 tcgcagtgcg gcgatcgtcg ctttcaccac gttggcgtga ttgcttgacc caagcgattt
     3541 cgcaagcacg tcgcgaatgc cggccgcttc cgcaacggct cgcacgccgc cgccggcgat
     3601 gatccccgtt ccgggcgatg caggacgcag cagcacgcgc gcaccgtcga actcgccgag
     3661 cacttcgtgc ggaatcgtgt tttcgttcag cgaaactttt tccatccctt tgcgtgctgc
     3721 ctcagaggct tttcgaatag cctcggaaac ttcgttggct ttaccaaacc cgtatcccac
     3781 ccgtccatca tgatcgccgg caacaatcaa ggcgctgaag ctgaaacgcc ggccgccttt
     3841 cacgactttc gcacagcgat ttatgaatac gactttctca cttgtgtcac cctttgcagt
     3901 cgatgccctt tcttgcctgc gcgagtctgg tcgccttcct gagtgtgtgt gattcatgaa
     3961 tttaaaactt taaaccgccc gcgcgcgccg catcggcgag tgccttcatt tttccgtggt
     4021 aacggaatcc gccgcgatca aaaacaaccc gctcgagctt cctctcaagt gaacgttccg
     4081 caattgcctt gccgattcgt tccgcagcag cctggtttgc atgcgcttta gtttcgccaa
     4141 gtaacgaact ctcagcagtc gatgcagcgg cgatcgtgcg tccggcatcg tcgtcgatca
     4201 cctgcgcata aatatgtttc cccgaaaaat ggactgccag gcgtggccgt tgcgcggtgc
     4261 ctgcaacttt tttcctgatc cttcgatgaa tgcgctgccg cgctgccttg cgaaacgtcg
     4321 ccatgcttat tgaacggtct tgccttcctt gcgacgaatc tgttcgcctg cgtagcgaac
     4381 acctttccct ttgtaaggtt ccggcggata aaaacctcgg atatcggctg caacctggcc
     4441 tactaatttt ttatcgacgc cctggatggt gatcttggtg ttatcggcca ccgtgatttt
     4501 gatgtctttc gggatcgcaa atgcaaccgg gtgcgagaag ccgaggctca agttgaggtt
     4561 cgatccctgg acggccgccc tgaaaccgac gccttcgatt tccagttgct tcgtgaatcc
     4621 ttcgctgact ccctgaacca tgttgtacac gaggctgcgc gaaagtccgt gcaacgcttt
     4681 cgcgctacgc gtttccgctt gccgcactac cgatacacgg ttgtcttgca cgctcgccat
     4741 gatttcgcgg ggaagagtcc actgcaattt ccccttcggc ccttctaccg acacctgtcc
     4801 gccgtcgccg acgttcacct tgaccttgtc gggaatctcg accgctttat ttccgattcg
     4861 tgacatgagc tgtaattccg taaattgtta caacgtaaat catcaccaga cgtaggccag
     4921 cagttcgccg ccgacctttt gctttcttgc ttcacggcct gataaaatgc ctcgtgaagt
     4981 ggaaaggatc gccagaccca ttccaccaag gacccgcggg atctcatccg cgccaacgta
     5041 tcggcgcaaa ccgggacgac tgacccgccg cagccccgca atcgcactcg atcggtctac
     5101 aagtttattg atgaccttga ttcgcggatg agcgccgctc gtgtcgaccg aataatccga
     5161 aatgtaacct tcctctttga agattcgtgc aatttcggct ttgattttcg agtacggaat
     5221 aagcacctcc ggcttttgcg cacgcactcc gttgcgcacg cgcgccagaa aatcagcaat
     5281 agggtctgta acagtgctca tacaaaaatc aggcggcttg cgcggcgggc ttctttgccc
     5341 ggtcgctgaa tggcatgccc atttcgctta atagcgattt agcttcctcg tccgttcgcg
     5401 ccgtggtgac aattgtaaca tcaaatccga tgttgcgctt gattttgtcg agttcgactt
     5461 cgggaaaaat cgactggtca gaaacgccga tcgtgtaatt gccgttcttg tcgaaacacc
     5521 gcggtgacac accgcggaaa tcgcgaatgc gcggcagggc agccttgatg aagcgctcca
     5581 gaaattcgta catgcgctcg ccgcgcaacg tgaccttcgc tccgatggcc tgatctttac
     5641 gcaatttaaa attggaaatg cttttcttcg ccagcgtctc cataggccgc tgtcccgtaa
     5701 tcaacgcaag ttccgctttg gcttcttcca gcgcttgctt gacgtcggac tgcgagccga
     5761 ccgaagtgtt gatcacgacc ttctcgacct ttggtatctg atgggcgttt ttgtagccgt
     5821 ggcgtttctg gagcgccggc atgacgtgct ctttgtagtg acgacgaaat tcgttttcca
     5881 tggaaagcaa tctgtcctat ttgggtgtcg ccccgctccg ctcggcatgc ttgccttttt
     5941 tgcccttttc tgatttaccg cccttctccg atttctcccg ctcgagtaat cgtacattgg
     6001 aaatgtgaat cggcccctcg cgttcggcga tcttcccgct cggattatcc tgcgatttcc
     6061 gcaggtgctt cttgataatg cgaacgcctt cgaccaacac gcgctgcttg cctgcaaaga
     6121 ctgcgagaac gcgtccggac gaaccacgga agttcc
//
LOCUS       DATDAJ010000189         2429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1106399, whole genome shotgun sequence.
ACCESSION   DATDAJ010000189 DATDAJ010000000
VERSION     DATDAJ010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1106399"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1199
                     /locus_tag="VIS53_04655"
     CDS             <1..1199
                     /locus_tag="VIS53_04655"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5767105.1"
                     /translation="LVAWIIGWDLILESAVGAATVAIAWSEYANRVLDWFGMRIPYQW
                     SHSPFEHDIDSGVHGIMNAPAVFILLLLTLLLIRGTKESAFVNGIIVVLKVSIVLLVI
                     GIGWGFVNPANHSPLIPAPTTYVTPQGITHAYGGILGILGAAGVVFFAYIGFDAVSTA
                     AQEARNPKRDMPIGILGSLVICTILYVLFSYVLSGVATVQDFRSHGREASVAFAITKY
                     MTGYEWLSKSVTVAILAGFSSVILVMLLGQSRVFYSMSRDGLVPKTFSDVHPKFRTPY
                     KSNILFFLFTGVFGAFVPEDVVGEMTSIGTLFAFMLVCAGVWILRSSRPDLERAFRVP
                     AVPIISTLGIIVCGAMIYGLGWTNWMRLLVWLLIGLIFYFSYGKYHSRINTPPPEMPE
                     GIQLTR"
     gene            complement(1214..1996)
                     /locus_tag="VIS53_04660"
     CDS             complement(1214..1996)
                     /locus_tag="VIS53_04660"
                     /inference="COORDINATES: protein motif:HMM:NF027583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4912 domain-containing protein"
                     /protein_id="HEY5767106.1"
                     /translation="MAKRKRKRNAGRSLAHRAFKIRQGPMVHLAEDARLPDVDERVDP
                     TRVCGQPFLFAIARDARTIFASWNINWRSVFEKAMPADRQVHLRVIGGEGVIETRVAV
                     EPMSAMHYVTISGLHNSYRVEIGYFHPFDTWHSVATSGEVEMPPRGSVELGDVDLATI
                     PFHLSFQQLANLFGAANDTSVASLVSEFQKRVLVRDKPNEATPFDTQILRSLNLSLPE
                     IAMAERNFKKIDTEKLARRARAMLSICRDHSSAWIRSETSWS"
     gene            2071..>2429
                     /locus_tag="VIS53_04665"
     CDS             2071..>2429
                     /locus_tag="VIS53_04665"
                     /inference="COORDINATES: protein motif:HMM:NF013621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HEY5767107.1"
                     /translation="MSPKIVELEELSNRCEKLRSAGKKIVATNGCFDLLHVGHVRYLQ
                     AARALGDLLVVGLNGDRSVRELKGAGRPITTQSERAEILAALASVDLVTVFPEIRATT
                     FLAAVRPAIYVKGGDYTP"
BASE COUNT          509 a          673 c          658 g          589 t
ORIGIN      
        1 aactcgtagc atggatcatt ggctgggatt tgatcctcga gtccgcggtc ggcgcggcga
       61 ccgtggcgat cgcgtggagc gagtatgcaa accgcgtcct ggactggttc ggcatgcgca
      121 taccctacca atggtcccac tcgccctttg agcacgacat cgacagcggt gttcacggca
      181 tcatgaacgc gccggctgtg ttcatcctgc tactactgac gctactgctc attcgcggca
      241 ccaaagaatc ggcattcgta aatggcatca tcgtcgtttt gaaggtaagt atcgtactgc
      301 tcgtgatcgg catcgggtgg ggctttgtga acccggcgaa ccactcgccg ctcattccag
      361 cgccgaccac ctacgtcaca ccgcaaggca tcacccacgc atacggagga attctcggga
      421 tcctcggcgc ggcgggggtt gtgtttttcg cgtacatcgg gtttgatgcc gtgagcacag
      481 cagcacaaga ggcgcgaaat cctaagcggg acatgccaat cggcatcctc ggttctttag
      541 tcatctgcac gattctgtat gtgctgtttt cgtacgtgtt gagcggcgtc gcgaccgtgc
      601 aggacttccg cagccatggc cgtgaagcat ccgtcgcgtt cgcgatcacg aaatacatga
      661 ccggctacga atggttgtcg aagtctgtga cagttgcgat ccttgccggc ttctcatccg
      721 taattctcgt gatgctgctt ggccaatcgc gcgttttcta ttcgatgagt cgcgacggac
      781 ttgtcccgaa aaccttttcc gacgtgcacc cgaaatttag aacgccgtac aaatcgaaca
      841 ttcttttctt tttgttcacc ggcgtctttg gcgcattcgt tccggaggac gtcgtcggcg
      901 aaatgaccag tattgggacg ctgtttgcat tcatgcttgt ttgcgccgga gtttggatct
      961 tgcgctcctc acgccccgat ctcgaacgtg cgtttcgggt accggccgtg ccgattattt
     1021 ccaccctcgg catcatcgtt tgcggcgcaa tgatttatgg tctcggctgg acgaattgga
     1081 tgcgattact tgtttggctt ctgattggac tgatcttcta ttttagctac ggcaaatatc
     1141 acagccgcat caatacgcca ccgccggaaa tgcccgaagg cattcaactg acgcgctaag
     1201 ccatagcaaa agtctaactc cagctagtct cgcttcgaat ccacgcgctg gagtggtcac
     1261 ggcagatcga aagcattgcg cgcgcgcgtc gcgcgagctt ttcggtgtcg atctttttga
     1321 aattgcgctc cgccattgct atttcaggca gcgagagatt caggctccgg agaatttgtg
     1381 tgtcgaacgg tgttgcctcg ttaggcttgt cgcgaactaa aactcgcttt tgaaattccg
     1441 agactaagct cgctaccgaa gtgtcgttag ccgctccaaa caaattagcg agctgttgga
     1501 aactaaggtg aaacggaatg gtcgccaaat ccacatcacc aagctcaacg cttccccgtg
     1561 gcggcatttc aacctcaccc gacgtcgcga cagaatgcca ggtatcgaat ggatgaaaat
     1621 aaccgatctc cactcggtat gagttgtgca aaccggatat cgtcacgtag tgcatcgcgc
     1681 tcatcggttc gacggcaacc cttgtttcta tgacaccctc cccgccaatc actcgaagat
     1741 ggacctgtcg atccgcgggc atcgcctttt cgaagacgga tcgccaatta atgttccaac
     1801 tggcgaagat agtgcgtgca tcacgtgcaa tggcgaatag aaatggctgc ccacacacac
     1861 gcgtcgggtc cacgcgctca tcgacatcag ggagtcgtgc gtcttcggcg agatgcacca
     1921 tggggccctg ccgaattttg aaggcgcgat gggccagtga tcgtcccgcg ttgcgttttc
     1981 tttttctttt cgccattctt ggaagaccgt cgcgaaatca gttaaaggcc aactgcaatt
     2041 gccgtgcaat ctcaaaatca gtgagaaaga atgagcccaa aaatcgtcga gcttgaggag
     2101 ctttccaatc gctgcgagaa gctgcggtcg gccggaaaga agattgtagc aacaaacgga
     2161 tgttttgatc tgctgcacgt tgggcacgtg cggtatttgc aggcggcacg agcgctcggc
     2221 gatcttctgg ttgtcgggtt gaacggtgac cgttccgtcc gtgagttaaa aggagcaggg
     2281 cgcccgatca caacccagag tgagcgcgcg gaaattctcg ccgcgttggc atccgtagat
     2341 ttggtcacgg ttttcccaga aatccgggcc acgacgtttc tcgctgccgt ccgccctgct
     2401 atttatgtca aaggcggcga ttacacccc
//
LOCUS       DATDAJ010000190         8494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1108191, whole genome shotgun sequence.
ACCESSION   DATDAJ010000190 DATDAJ010000000
VERSION     DATDAJ010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8494
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108191"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(169..1125)
                     /locus_tag="VIS53_04670"
     CDS             complement(169..1125)
                     /locus_tag="VIS53_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEY5767108.1"
                     /translation="MAKNSEPVSVVTGGAGFLGSHLVDRLLGEGHRVIAIDNLITGNT
                     ANIGHLAGNENFRFIKHNVSNFIFLPEQQIDYVFHFASPASPIDYLELPIPTLKVGAL
                     GTHNTLGLAKDKKATFILASTSEVYGDPLEHPQKEDYWGNVNPIGPRGVYDEAKRFAE
                     AITMAYHRYHRVDTRILRIFNTYGPRMRLRDGRVVPAFIGQALSGQPLSVFGDGSQTR
                     SFCYVSDLIDGIFRLAMSDFHEPVNLGNPREMTIKQFAEEIIRITGTKSTIEYKPLPV
                     DDPKVRQPDITRAKKVLSWEPRVQFEEGIKETIEYFKQSLKS"
     gene            1510..2490
                     /gene="trpS"
                     /locus_tag="VIS53_04675"
     CDS             1510..2490
                     /gene="trpS"
                     /locus_tag="VIS53_04675"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEY5767109.1"
                     /translation="MTEKERMRILSGIQPSGALHIGNYFGMMRPAVALQTEGEALYFV
                     ADYHALTSLRDPEMLRANSRRVALDFLACGLDPERATLFRHSDVPQVTELAWILSTVA
                     PMGLLERAHSYKDKLARGMSANVGLFSYPILMAADILIYDSDVVPVGKDQKQHIEMTR
                     DLAVKMNETYGQIFKLPEPRIQPATETVPGIDGQKMSKSYGNNIDIFGDEKEMRKRVM
                     SIVTDSLTVDVPKDPATSTIFKLYSLVASNDEIADMRERFVKGGTGYGDFKKQLFEKL
                     WEYFAPMRKRREEILKEKSYIEDVLARGASRANEIANQVMDRVRKAVGLR"
     gene            complement(2487..2819)
                     /locus_tag="VIS53_04680"
     CDS             complement(2487..2819)
                     /locus_tag="VIS53_04680"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEY5767110.1"
                     /translation="MAPNEFRELALSFPDAIESAHMHHPDFRVGGRIFATLGYPNENS
                     AMVKLSPAEQKEFVRSSPGVFTTAKGAWGRQGSTIVYLPAATIDIVREALTAAWRNTA
                     PKRLSKNR"
     gene            complement(2826..3158)
                     /locus_tag="VIS53_04685"
     CDS             complement(2826..3158)
                     /locus_tag="VIS53_04685"
                     /inference="COORDINATES: protein motif:HMM:NF022643.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2834 domain-containing protein"
                     /protein_id="HEY5767111.1"
                     /translation="MKARHFYLVCCVLGLVLPYSQFVPWVLEHGLNVTSFCRELFANR
                     ISAFFAMDVIVSAIVLIWFIRSEGKRLRVRLLWLPIVGTLLVGVSLGFPLFLFLREAT
                     LDRTIARA"
     gene            3231..3497
                     /locus_tag="VIS53_04690"
     CDS             3231..3497
                     /locus_tag="VIS53_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HEY5767112.1"
                     /translation="MAILRVHVVPNAKVDSVVGVHGGAIKIKLRAPAVDGKANAALIR
                     FLAEQLKLSRDAIVLKRGDKSRGKTIQIHGLSEEDVCRRLRSGG"
     gene            complement(3555..4445)
                     /locus_tag="VIS53_04695"
     CDS             complement(3555..4445)
                     /locus_tag="VIS53_04695"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY5767113.1"
                     /translation="MNRHERGLEFKVGVFVFVGLAMLAALVVQFGRLGEGFKTYYTIT
                     VRFSDASGLLKGTDVLLAGARIGKVAGGPKLLSEGSGVAVPLKIYDYIKIPEGTKFTV
                     GSSGLLGDRFVNVTIPPGTPKAYLPPNADVKGARETGIDDLTRSGGALVNDLRGTVQK
                     IDTTVNRLNQDTLSPANMENLKASMEHLNQATGALAESSKKLDGVIEQADSAMGSAKK
                     AADGLQNAIADTRKVLSSATQGKGLVAALLNDQQLANDLHALITNLRAHGVLFYRDSA
                     AGRQPAPPAQTTPSRRAPRR"
     gene            complement(4545..5354)
                     /locus_tag="VIS53_04700"
     CDS             complement(4545..5354)
                     /locus_tag="VIS53_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767114.1"
                     /translation="MIEAPPSPKMSPEPPLASDNSSPMIAVRSLQKKIGQQEILRGVD
                     LKISSGETLAIIGRSGGGKSVLLKHMVGLMEPDSGEIWIQGQNIIGMNERQLGAIRKK
                     VGILFQGGALFDSMTVEDNIAFPLREAGERDRKVLRSKVSEMLEVMEMEGQEDKMPEN
                     LSGGMKKRVGLARAIIRRPSCVLYDEPTAGLDPVVADSINRLIRRLQQRFGVTSVVVT
                     HDMKSAFDVADRIAYLHEGQIYFNGTANQLQQSSDPLIQDFLLGRSNGGGY"
     gene            complement(5404..6198)
                     /locus_tag="VIS53_04705"
     CDS             complement(5404..6198)
                     /locus_tag="VIS53_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5767115.1"
                     /translation="MVRFFSALGAPLLAFVQYLGELVLLAADTFRSIFTHKLRWKLFL
                     NQVVEIGLLSQLVVIITGAFTGAVFSAQTFFQFNKLGMGSAVGAVVSVSLCRELAPVL
                     TALMVAGRVGAAMSAEIGTMKVTEQIDALRALAVYPVDYLVVPRVLAMMVSMPLLVAE
                     CIAVGIASGYLVAIFMLDINGTYYMANMVRWTRNRDIIMGLSKAFCFGILIVFISCQK
                     GLATREGAVGVGRATTEAVVNSSLAVLVCNFFLTMMFNIIYPAGYQ"
     gene            complement(6293..6556)
                     /locus_tag="VIS53_04710"
     CDS             complement(6293..6556)
                     /locus_tag="VIS53_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767116.1"
                     /translation="MFEVEIYARGLREMANILELDRQLVEIAGLRYKMDTNHDIVYLE
                     FDEPTLSIREIRTIFLKLDLEPLFIGAIPPELQSRTKTERLSV"
     gene            6688..7182
                     /locus_tag="VIS53_04715"
     CDS             6688..7182
                     /locus_tag="VIS53_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767117.1"
                     /translation="MRSVGQYLLATNVVLGALFFVSCETVPQGIQQARIEMVQQIAAE
                     PSGDYYIGRRYYKPDYKFWGYVRKPGQPWSTAELVMLNEKEKLAPDRERLEFGSDNNY
                     EYKLHGYFSGDKVYEPASNGIYPEFVLKGYELISTTPTPIFKSQMSGRSNPTDLRYVV
                     EKPE"
     gene            7179..8114
                     /gene="xerA"
                     /locus_tag="VIS53_04720"
     CDS             7179..8114
                     /gene="xerA"
                     /locus_tag="VIS53_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008907 - integrase activity [Evidence
                     IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase/integron
                     integrase"
                     /protein_id="HEY5767118.1"
                     /translation="MSGSSSLADRANARAVEGSRDPLAEEFLRYLANERNASPRTLKA
                     YRHALTSFRAENKTSWKKCAADDFRNYLFAVMKRGQARSYVRLQFSALRTFYQFLAAR
                     KRLRHNPVREVQLPKMEKKLPLVLTRQQVDELLTAPTREPKSRSAPSWMPLRDVGIME
                     LFYSSGLRLSELAALDVSDVDPYTESVRVFGKGRKERVCPVGLPALEAIQKYRAMANV
                     HTGPLFINKARRRISARSVWLVLKRYVRRTSIPISMSPHKLRHSFATHMLDRGADLRS
                     VQALLGHASLSTTQIYTHVTVERLKKAYADAHPRA"
     gene            complement(8116..>8494)
                     /locus_tag="VIS53_04725"
     CDS             complement(8116..>8494)
                     /locus_tag="VIS53_04725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY5767119.1"
                     /translation="SEEVRHLASTDSLACAQHGQAEVIAALHRKYREGSLTLTVYQSV
                     LQQFAEDIDADAFRWLPLSPTVLDRVRVDFETLPRRNFLRASDALHLVIARENGFRQL
                     YSNDKNLLAAAPHFGIRGVDVLD"
BASE COUNT         2009 a         2354 c         2269 g         1862 t
ORIGIN      
        1 caaatcgcag taaacgccag taaaatttca gcgcctgagt ccaggcgatc ggttgaaaca
       61 gttaaaattc tgtagccgct tcgctgtgcg aagcgcttcc ctcatggctc ggatacacac
      121 gcgccgcgtc gctcacagag cgacggctac aaatactctt taaccctttc aactcttcaa
      181 cgactgtttg aagtactcga tcgtttcctt gatcccctcc tcgaactgaa ctcgcggttc
      241 ccaactgagg acttttttcg cgcgggtgat gtccggttgg cgcaccttcg ggtcgtccac
      301 gggcaagggt ttatattcga ttgtggattt cgtccccgtg attcggatga tttcctctgc
      361 aaactgtttg atggtcatct cgcgtggatt gccgaggttg accggctcgt ggaaatcgct
      421 catcgcaagc ctgaaaattc catcgatcaa atcggagacg taacaaaatg agcgcgtctg
      481 cgatccgtcg ccgaatacgc tgagcggttg cccgctcagg gcctgcccga taaacgccgg
      541 caccacgcgg ccgtcgcgca agcgcatccg cggaccgtac gtgttgaaga tccgcaagat
      601 tcgcgtgtct acgcggtgat agcggtggta agccatggtg atcgcttccg cgaaccgttt
      661 cgcttcgtcg taaacgccgc gcggccctat aggattcacg ttgccccagt aatcttcctt
      721 ttgcggatgc tccaagggat cgccgtacac ctccgacgtg gaagcgagaa tgaacgtggc
      781 ttttttgtcc ttggctaaac caagcgtgtt gtgcgtgccg agcgcaccaa ctttgagcgt
      841 cggaatcggg agttccaaat aatcgattgg actcgccggg gatgcgaagt gaaacacgta
      901 gtcgatctgt tgttccggga ggaaaataaa attcgagaca ttgtgtttaa tgaaccggaa
      961 attctcgttc ccggcgagat ggccgatatt cgcggtgtta ccggtgatta gattgtcgat
     1021 ggctatgacg cgatgacctt ctcccaatag ccggtctacg agatgcgagc caagaaaacc
     1081 cgcacctccg gtgacgaccg aaacgggctc ggaatttttg gccatttaag gagttgttct
     1141 aatcgctgcc gcgcaagttt accagcagga agtgggttcg ctccgttgaa tcgttaaatc
     1201 gttgaatcgt gaatcgttag tcccgtgtaa cgatgtaacc atgtaacgaa ttacgaaatc
     1261 ccatcattcg tgattcgaca tcaggcattc gtcattaatt cgacattcga aaagttcgga
     1321 ataaaactga gattcttcga ctccgctcag aatgacagat aaaaacccat gagaattctt
     1381 tccggtatcc agcccagcgg tgccctgcac atgcccggtt gtcattccga gcgaagtcga
     1441 ggaatctctc gacattggtt gaacgtagca gccgattaaa cagttagaga tggctcgact
     1501 ccgctcgaca tgacagagaa agaacgcatg cgaatccttt ccggtatcca gcccagcggc
     1561 gccctgcaca tcggcaatta ttttggcatg atgcggcctg cagtcgccct gcaaaccgag
     1621 ggtgaagcgc tttatttcgt cgccgattac catgcgctca cgagtttgcg cgacccggaa
     1681 atgttgcgcg caaacagccg ccgcgtcgca ctcgattttc tggcgtgcgg actcgatccg
     1741 gagcgcgcga cgctgtttcg gcattcggat gtgccgcagg tgacggaact cgcctggatt
     1801 ttgtcaacgg tagcaccgat ggggttgctt gagcgggcgc actcgtacaa ggacaaactc
     1861 gcccgcggta tgagcgcgaa cgttggactc ttcagctatc ccatcctgat ggcggcggac
     1921 attttgattt acgacagcga tgtcgtgcca gtggggaagg accagaaaca acacatagaa
     1981 atgacgcgcg atctcgccgt gaaaatgaac gaaacgtacg ggcagatttt caagctgccc
     2041 gagccacgta ttcagcccgc aaccgaaacc gtgcccggca tcgacggcca gaaaatgagc
     2101 aagagctacg gcaacaacat cgacattttc ggcgacgaga aggaaatgcg aaagcgcgtg
     2161 atgagcatcg tcactgattc cctgacggtg gatgtcccca aggacccggc gacatcgaca
     2221 atctttaagc tctactcgtt ggtcgcctcg aatgatgaaa tcgcagacat gcgtgagcga
     2281 tttgtaaaag gcggtactgg ctacggcgat ttcaagaaac agttgttcga aaaactctgg
     2341 gagtatttcg cgccgatgcg caaacgccgc gaagaaattc tcaaggagaa atcgtatatc
     2401 gaagatgtcc ttgcccgcgg cgcgagccgc gccaacgaaa ttgccaacca agtcatggac
     2461 cgcgttcgca aagcggttgg tctgcgttag cgattttttg ataaccgctt cggggcggtg
     2521 ttacgccatg ccgcggtgag cgcttcgcgc acgatgtcga tcgttgccgc cggcaagtaa
     2581 acaattgtgc ttccctgccg gccccaggcg cctttcgccg ttgtgaaaac gcccggacta
     2641 cttcggacaa attctttttg ctcggctggc gatagcttca ccatcgccga gttctcgttg
     2701 ggatatccaa gggttgcgaa aatccttcca ccgacgcgaa aatcgggatg atgcatgtgc
     2761 gccgattcaa tcgcgtcggg aaaactcagc gccagttcgc gaaattcatt tggtgccatg
     2821 gctctttaag ctcgagcaat tgttcgatcc aacgtcgcct cccttaaaaa aagaaaaagc
     2881 gggaacccaa gcgatacacc gacgagcaat gttccaacga tcggcaacca aagaagccgg
     2941 acccgcaaac gtttgccttc gctccgaata aaccagatca gcacgattgc agaaacgatc
     3001 acatccatcg caaaaaacgc gctgatccga ttggcgaata actcacgaca gaacgaggta
     3061 acattcaagc cgtgctccaa tacccacggc acaaattgcg agtaaggcag aaccaatcca
     3121 agcacacagc aaaccaggta gaagtgtcgc gctttcatgg ctgcatatca tcgcatgcgg
     3181 cgccaaaatc ggtcgagcaa gttcactcct gccctgatat gatccggtga atggcaattc
     3241 tgcgggtcca cgttgttccg aatgcgaagg tggacagcgt cgtaggcgtg catggtggcg
     3301 caattaagat caaactacgc gcaccggcag tcgacggaaa agcgaacgcg gcgttgattc
     3361 gctttctcgc cgagcaatta aaactgtctc gggacgccat cgtgctaaaa cgcggtgata
     3421 aatcgcgcgg caaaacaatt cagatacatg gcttgagcga ggaagacgtg tgcaggcgat
     3481 tgcgctcggg gggttgagcg atcaaagcaa gcttgggcgc atcacgggca ctgatcgcga
     3541 ctgctcttag tacctcagcg gcgtggagct cgtcgtgacg gcgtggtttg tgccggcggg
     3601 gcaggctggc ggcctgcggc gctgtcgcgg taaaacaaga cgccgtgtgc ccgcaaatta
     3661 gtaatgagcg cgtgaagatc gttcgccagt tgttgatcat tcagcagtgc cgccaccaaa
     3721 cctttgcctt gcgtggcgct gctcaaaact ttgcgcgtat cagcaatcgc gttctgcaag
     3781 ccgtcggcgg cctttttcgc ggagcccatc gcggaatccg cctgttcgat cacgccgtcc
     3841 agtttcttgg acgactcagc caacgcgccg gtagcctggt tcaaatgttc catgctcgcc
     3901 ttcaggtttt ccatgttcgc cggggaaagc gtgtcctgat tcagacggtt cacagttgtg
     3961 tcgatctttt gcacggtacc gcggaggtcg ttcaccagcg cgccgcctga gcgtgtgaga
     4021 tcgtcgatgc cggtctcgcg tgcacctttg acgtcggcat tcggcggcag atacgccttc
     4081 ggagttccgg gcggtattgt tacattcacg aaccgatcgc caagcaaacc cgaactgccg
     4141 actgtgaact tcgttccctc agggatctta atgtaatcat agattttcaa aggtacagcc
     4201 acaccactgc cctcactgag taacttcggg ccacccgcga cttttccgat tctcgctccg
     4261 gcaagcaaga catcggtgcc tttcagcagt ccgctcgcat cactgaagcg cacggtgatg
     4321 gtgtaatacg tcttgaagcc ttcacccagc cggccgaact gcacgaccag cgcggctaac
     4381 atcgccagcc ctacaaaaac aaaaacgccc actttgaatt ccaaacctcg ctcgtgccgg
     4441 ttcatcttgg atgtttattg tcgatcttgc tgctaatttc cgcaaggtaa cggcagggct
     4501 cacctccggc gcttttcgcc atttgagact acggtcaatt gaggtcaata acctccaccg
     4561 ttagatcggc cgaggaggaa atcctgaatg agtggatcgc tcgattgctg aagttgattc
     4621 gctgtaccgt taaaatagat ctgaccttcg tgcaggtagg cgattcggtc ggccacatca
     4681 aacgcgcttt tcatatcgtg ggtaaccacc acgctggtca ctccaaaccg ctgttgtagc
     4741 cggcgaatca atcgattgat actatcggcg actacaggat caagcccggc tgtcggctcg
     4801 tcgtataata cacacgaggg ccgccgaatg atggcgcgcg ccagcccgac ccgttttttc
     4861 atcccgccgc tcaaattttc cggcatctta tcttcctgac cttccatttc catcacctca
     4921 agcatctcgc taacttttga gcgcagaact ttccgatcgc gttcgccggc ttctcgcaaa
     4981 ggaaaggcaa tgttgtcttc aaccgtcatc gaatcaaaaa gggcgccacc ttgaaataga
     5041 atgccgacct ttttgcggat cgcgccgagc tggcgctcgt tcattccaat gatgttttgc
     5101 ccctggatcc aaatttcccc ggagtcgggc tccatcaacc caaccatgtg tttcagcaaa
     5161 acgctcttgc cgccaccgct gcgtccaatg atcgccagcg tctcgccgct gctgatctta
     5221 agatcgacgc cgcgcaaaat ttcctgttgc ccgattttct tttgcaacga acgcacggca
     5281 atcatgggcg acgaattatc cgaagccaga ggaggctccg gtgacatctt cggagatgga
     5341 ggcgcttcga tcattgcaac gccaagtgtc gactctcaac ctgcaacact caactacaca
     5401 gcgtcactga tagccggctg gataaataat gttgaacatc atggtgagaa aaaaattgca
     5461 aaccaggact gcgagcgagg agttcaccac cgcctcagtg gtggcccgac cgacgccaac
     5521 tgctccctcg cgtgtggcca atcctttttg acaactgatg aatacgatga gtatcccgaa
     5581 acagaacgct tttgacagac ccatgatgat atcgcgattg cgcgtccagc gcaccatgtt
     5641 cgccatgtag taagtgccgt taatgtcgag catgaaaatc gcaacgagat aaccggatgc
     5701 gatgcccaca gcgatgcatt ccgccaccag aagtggcatc gagaccatca tggccagtac
     5761 gcgcggcact accaggtaat caaccggata cacagcaagc gcccgcaagg catcgatttg
     5821 ctcggtgact ttcatcgtgc cgatctcggc tgacatcgct gcgccaacgc gtccggctac
     5881 catcagagca gtcaacaccg gcgcgagttc gcggcagagt gaaaccgaaa ctactgcgcc
     5941 tacagctgag cccattccca gcttgttaaa ttggaaaaag gtttgtgccg agaagaccgc
     6001 accagtgaac gcgccggtaa ttatgacgac gagctgcgaa agcaacccta tttcgacaac
     6061 ctggttgagg aacaatttcc accggagctt atgggtgaaa atcgaacgaa acgtgtcagc
     6121 agccagcagg acgagttcgc cgagatattg gacgaacgcg agcagcggcg caccgagggc
     6181 gctaaagaag cggaccatta tggaagaagc gacgagagat aactggacag tgaacggcta
     6241 aagagcgtgc tgcgcaacgt tttgttctga tcactaatcg ccgattacgt cgctagacgc
     6301 tcagccgctc ggtctttgtt cgcgactgta attcgggcgg gatcgcgccg ataaaaagcg
     6361 gttcaagatc gagtttaagg aagatggtgc gaatttcgcg aatgctcaaa gtcggttcat
     6421 cgaactcgag ataaacgata tcgtgatttg tatccatctt gtaacgcaga ccggcgatct
     6481 ccacgagctg ccggtccaat tccaggatgt tcgccatttc gcgcaagcca cgcgcataaa
     6541 tctcaacttc gaacatgctt cgaatactag cggtccggtc caagccatgc aatcgatctc
     6601 gcacgagaaa atgattgccg gaccttgtgc ctccgagcta gcaattgcgc ccggcccaaa
     6661 gctgcgtaaa tgatgcccgt tcaagcaatg agatccgtcg gtcagtattt gttggctacg
     6721 aatgtggtgc tcggcgcact gttcttcgtc agttgcgaaa ctgttccgca agggattcag
     6781 caggcgcgaa tcgagatggt gcaacaaatc gcagccgaac cgagcggcga ttattatatc
     6841 gggcggcgtt actacaaacc cgattacaaa ttctggggtt acgttcgcaa gccggggcag
     6901 ccatggagca cagcggagtt ggtgatgctc aatgagaaag agaaacttgc gccggaccgc
     6961 gaacgtctcg agttcggcag tgataacaat tacgaataca agctccacgg ctacttcagt
     7021 ggcgacaaag tgtatgagcc tgcgagcaat gggatttatc cggagttcgt tttgaagggg
     7081 tacgagctta tttccactac cccgacgccg atcttcaaaa gccaaatgag tggtcgctct
     7141 aatccaaccg acctgcggta cgttgtcgag aaacccgaat gagtggttcg tcatcgctgg
     7201 ccgatcgcgc aaacgcgcga gcagttgagg gatcccgaga tcctctcgca gaggaattcc
     7261 tgcgttatct cgcgaacgag cggaatgctt cgccgcgcac gctcaaggcg tatcgccatg
     7321 cgttgactag tttccgcgcg gaaaacaaaa cgtcgtggaa aaaatgcgcg gccgacgatt
     7381 ttcgcaatta cctctttgcg gtgatgaaac gcgggcaggc gcgttcgtac gtgcgactgc
     7441 aattctcagc actacgcact ttctatcaat ttctcgccgc ccggaaacgg ctgcgacata
     7501 atcctgtccg cgaagttcaa ctgccaaaga tggagaaaaa gctcccgctg gtcctgacgc
     7561 gccaacaggt ggacgagctt ctcacggcgc cgacacgcga gccaaagagc cgatccgcgc
     7621 catcatggat gcctctgcgc gacgtaggca taatggaatt gttttatagc agcggcttgc
     7681 gcctgagcga actggctgcg ctcgatgtgt cggatgttga tccttacaca gagtcggttc
     7741 gcgtattcgg caagggccgc aaggaacgcg tctgcccggt aggtttgccg gcgctggaag
     7801 cgatccaaaa gtatcgggcg atggccaacg ttcacacggg tcccctcttc atcaacaaag
     7861 cgcgacggcg aatctccgcg cgctcagttt ggctggtgtt gaaacggtat gttcggcgga
     7921 cgtccattcc gatttccatg agcccacaca aattgcgcca cagcttcgcc acgcacatgc
     7981 tcgatcgcgg cgcggatctg cgcagcgtgc aggcgttgct cggccacgcc agtctttcca
     8041 cgacacagat ctacacgcac gtaaccgtcg aacgtctcaa gaaagcgtac gcggatgcgc
     8101 atccgcgagc ctaatttaat ccaacacatc tacacctcgg attccgaagt gcggagcagc
     8161 ggctagcagg tttttgtcat ttgagtacaa ttggcggaat ccgttttccc tcgcaattac
     8221 aagatgtagt gcatcggatg cgcgaaggaa attccttctg ggtagcgtct cgaagtcgac
     8281 ccggacgcgg tctagaacgg tcggggacaa cggcagccat ctgaaggcat cggcatcgat
     8341 gtcctcagcg aattgctgta acaccgattg atacacagtc agtgtcaaac tgccttcacg
     8401 atacttacgg tgaagagccg caattacttc cgcttgtccg tgttgagcac aggcaaggct
     8461 gtcggtgctg gccagatgac ggacttcttc agag
//
LOCUS       DATDAJ010000191         3615 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1118128, whole genome shotgun sequence.
ACCESSION   DATDAJ010000191 DATDAJ010000000
VERSION     DATDAJ010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118128"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VIS53_04730"
     CDS             complement(<1..254)
                     /locus_tag="VIS53_04730"
                     /inference="COORDINATES: protein motif:HMM:NF012492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5767120.1"
                     /translation="MKAGLAIGLVIPDLWQQEAVRALQQGKDVVVQAPTGSGKTYIFE
                     LLYPNLKTQAVFTVPTRALANDKLSEWRVRGWDVGISTGDV"
     gene            complement(730..936)
                     /locus_tag="VIS53_04735"
     CDS             complement(730..936)
                     /locus_tag="VIS53_04735"
                     /inference="COORDINATES: protein motif:HMM:NF021560.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2283 domain-containing protein"
                     /protein_id="HEY5767121.1"
                     /translation="MKISYDPEVDALSITFRETTVTTKHLAEGIAADYDSEGRLAGLE
                     ILDAQKRFGGTETMRRVELEGVGT"
     gene            complement(933..1196)
                     /locus_tag="VIS53_04740"
     CDS             complement(933..1196)
                     /locus_tag="VIS53_04740"
                     /inference="COORDINATES: protein motif:HMM:NF025442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4258 domain-containing protein"
                     /protein_id="HEY5767122.1"
                     /translation="MKPIRLSNHASRYMTRRGFTVLEVEEAIRTVTWQPAELERLECR
                     KTFAYGKEWNGRVYAAKQVRPIFVEEASEIVVVTVYTYYFDQP"
     gene            complement(1301..1828)
                     /locus_tag="VIS53_04745"
     CDS             complement(1301..1828)
                     /locus_tag="VIS53_04745"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY5767123.1"
                     /translation="MKSIWIGVIGVMLFVASASAASSVLQGIVKDVNGHPIKGADIRI
                     EATKTGRLLTTVKTNVNGRYSLEGLAAGNYRVTLVVNGAVKASINNTTLEPGESTQLN
                     FGLKQTRASVTVTKGKHRVWMPAFTGSRLPGRWVEVDDSGGWSAENATANHIIRVSAE
                     ELERVKHNRTDKSPP"
     gene            complement(1910..2890)
                     /locus_tag="VIS53_04750"
     CDS             complement(1910..2890)
                     /locus_tag="VIS53_04750"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlxA family transcriptional regulator"
                     /protein_id="HEY5767124.1"
                     /translation="MGKRIGFFIFDGLTALDLVGPFDTFAVATELASSRENGRAYDLV
                     TVGLKSKAVVAESGMRFHPDTTILKAPALDTLIIPGGEGLRRADVASKISDWLQRRAP
                     NTRRLVSICTGIYGLAYAGLLDDRRVSTHWRFASRIIREFPKLKVEPDALFVKDGAFY
                     TSAGIAAGIDLCLALIEEDYGPKLALDVARELVVYLKRPGSQEQYSQPLQFQIRSSDR
                     FSEIIAWIAGHLGEDLSQEVLASKAAYSPRHFGRLFRNAYGVTPARFVEKLRMDEARA
                     RLAIPRSTVENVAESVGFKNRFVFSRAFERRFGLSPNAYRQSFQSSAKPV"
BASE COUNT          860 a          984 c          963 g          808 t
ORIGIN      
        1 acgtcacccg tggatatgcc gacatcccag ccgcgcacgc gccattccga taatttatcg
       61 ttagcgagtg cgcgggtcgg gacggtgaac accgcctgag ttttgaggtt cggataaagc
      121 agctcgaaga tgtaagtctt gcccgatcct gtcggcgcct gcaccaccac gtctttcccc
      181 tgttgcaacg cacgcactgc ctcctgttgc cacagatcgg gaattaccag cccgatggcc
      241 agccctgcct tcattgagaa aacatccgtg cgccaaatgc agatgcaatt tgtggcttca
      301 acacgccagt cgtatggcac attgacgtaa aggtagtcag ttgtcggtcg tcagcggtca
      361 gtggtcacgc gcagcgattc tgccacaaat tgcgaataac cagtcggccc gaatcgagct
      421 gatgggatca gcgagataga aggtaaagtc gcgagggtag cgacgagcga gttgggaagc
      481 gagcgagttt caaaatccct ccatcacccg ccaagatgtt gcaacgtggt cgccttgcaa
      541 cgggaacagc ggagcgatcc ctatggagct gccttaggag cgggtgaagc gattgatcaa
      601 ggcgctgaag gcgacggctg cgacttcagg ttagcaaata gccccggcac gaatttttca
      661 tccgctttaa cgatgtaacg tttcaacgga tcacgcgacg atgaccgaat ccaaaggcgc
      721 cttggatctt taagtgccaa cgccttccaa ttccacgcga cgcatcgtct cggttccacc
      781 gaagcgtttt tgcgcgtcga gaatttcgag gccggccaat cgaccttcgc tgtcgtagtc
      841 agcggcgatc ccttcggcca aatgtttggt cgtaacggta gtttcgcgga acgtgatgct
      901 gagtgcgtcg acttcggggt cgtagctgat tttcatggct gatcaaaata gtatgtgtag
      961 accgtcacca caacaatttc ggaagcttcc tcgacaaaga ttggtcgaac ctgttttgcc
     1021 gcatagactc tgccattcca ctccttgcca taggcgaaag tttttcggca ttcgagacgt
     1081 tcgagctcag ccggttgcca agtaacggtc cgaattgctt cttccacttc gaggacagta
     1141 aaaccgcgcc tagtcatgta gcgcgatgcg tgattggaaa gccgaatcgg tttcaccgca
     1201 tgcgattaaa cagcgaagct aatcaaaaca aaaccaagaa cgagcgacga agtcgaagag
     1261 ctttgcagtt aatactgcgt cacgggcatt ctggtttgcg tcatggaggc gatttatccg
     1321 ttctgttgtg ctttacccgt tccagttctt ccgcactaac gcgtatgatg tgattagcag
     1381 tagcgttttc ggccgaccag ccgccactgt catcaacttc cacccagcga ccgggcagac
     1441 gacttccggt aaatgccggc atccaaaccc tatgtttacc tttcgttacg gttacggacg
     1501 cgcgcgtttg tttgagccca aaattcagct gtgtcgattc acctggttcg agcgtcgtat
     1561 tattgatgga agccttcacg gcaccattca caaccagtgt cacccggtaa ttgcctgccg
     1621 cgagaccctc taaactgtaa cggccgttta cattcgtttt aaccgtcgtg agcaatctgc
     1681 cagtctttgt cgcttcaatc cggatatccg cgcctttaat cggatgtccg ttaacatcct
     1741 tgacgattcc ctgcagtacg gaactggcgg ccgatgcact tgcgacaaaa agcatgactc
     1801 caataacacc aatccaaata gatttcataa acatggccag agagtgcaag cgtaagcaac
     1861 cctgtcgagg acaagattgt gatgaattca gtcagaaacg acgatttcgc taaaccggtt
     1921 tggccgaaga ctgaaaactt tgtcgatatg cgttcgggct cagaccgaac cgacgctcga
     1981 acgcgcggct aaagacgaag cgattcttaa agccaaccga ttccgcaaca ttctcgaccg
     2041 tgcttcgtgg aatcgccagg cgtgctctgg cttcgtccat gcgcaatttc tccacaaacc
     2101 gcgctggcgt cacgccatat gcatttctga acagacgccc gaaatgtcgt ggcgaatacg
     2161 cagccttgct agctaacacc tcttgagaaa gatcttcgcc gagatggccg gcaatccagg
     2221 cgatgatctc ggaaaatcga tcgctggacc gaatctggaa ctgcaaaggt tgtgagtatt
     2281 gttcctggct gcccggccgc tttaagtaaa cgaccagctc acgcgcgaca tcgagtgcca
     2341 gtttgggtcc gtaatcttct tcaattaacg caaggcacag atcaatcccc gccgctatac
     2401 cggccgaagt ataaaacgct ccgtctttca caaagagagc gtcgggttcc actttgagtt
     2461 ttggaaactc gcgaataatt cgcgaagcga agcgccaatg cgtgctcact cgccgatcat
     2521 caagtaagcc ggcgtaagcg agaccatata tacctgtaca aatcgacacc agccggcggg
     2581 tgtttggggc tcgtcgctgt aaccagtcgg aaatcttgct cgcaacatcc gcacgacgca
     2641 gtccttcccc tcctggtatg atcagagtgt ccagagcagg agccttcaga attgtggtat
     2701 caggatgaaa gcgcatccca gactctgcca ccactgcctt gctctttagc cccacagtca
     2761 cgagatcgta ggcacggcca ttttcacgag atgacgcgag ctcggtcgcg actgcgaagg
     2821 tgtcgaatgg ccccaccaga tcgagcgcag ttaggccatc gaaaataaaa aaaccgatcc
     2881 gcttgcccat caacctatcg taactccatt cggtgtagtg tccacgccgc ctcaatgtta
     2941 cgattagcgg agcacggact gatgcaaaca cgactgtccg acccatgccc gggaagtcat
     3001 tttagcacta gtttcgcgac gaaggctgcg accaatgccg cttcttcaaa ccgggctctt
     3061 gtccggatag ccgcctgttg ccacagatcg ggaataacca actccgccga atcgagctga
     3121 tgggatcagc gaggtagaat acgtcgcgat ggggatcgcg cggatagacg gcaacgcagc
     3181 tagggtagct ggcgcaagca ctgggaagtg cgagtgatca aggtaaagtg acgagggtag
     3241 gagcgagcga gtgcgggcag cgagcaagtt tcaatcggga tagggatctg gcgtacgaac
     3301 cgcactgatg ttcatcggtg tttgtggcag tcgacgaccg cgacttcagg ttagtagacg
     3361 gcgcggcagc atttttttat ccgccgcttt aacgatttaa catttcaacg gatcacgcgg
     3421 cgatagcccg tggtcgacct gagttcggta cccgctgccc gttgtcacga catggatcga
     3481 ctgcttcatc aatgagaacg gcaaagcccc ttgcctgggt atggagtgag taggtctcgg
     3541 gtgttcaggg gagtaagccg atggaagtcg acgatcgtta gccatgacgg tggggaaagc
     3601 gactttgcag cagcg
//
LOCUS       DATDAJ010000192         2814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1122239, whole genome shotgun sequence.
ACCESSION   DATDAJ010000192 DATDAJ010000000
VERSION     DATDAJ010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2814
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1122239"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VIS53_04755"
     CDS             <1..272
                     /locus_tag="VIS53_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767125.1"
                     /translation="ASLALSSAAFAAGAKTYEVTGPVLEVNDSMIVVQKGKDRWEINR
                     DANTKVTGDVKVGDKVHVTYTMSATDIEVKAGKGAKKEAKAAPTP"
     gene            complement(458..1996)
                     /locus_tag="VIS53_04760"
     CDS             complement(458..1996)
                     /locus_tag="VIS53_04760"
                     /inference="COORDINATES: protein motif:HMM:NF017669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEY5767126.1"
                     /translation="MAEPILVAQSKEPIFLLPKMANRHGLIAGATGTGKTVTLQTLAE
                     NFSARGVAVFMADVKGDLAGLSQPGANNPKIVERAKELKIGNFTGEACPVVFWDVFGE
                     QGHPVRATVSEMGPLLLGRLLNLNDTQAGVLNMVFKIADDNGLLLLDLKDLRSMLQYV
                     ADNADQFKTQYGNISAASAGTIQRNLLALESQGADKFFGEPALNLEDLIQTQNGRGVI
                     NILAADKLMQKSPKVYATFLLWMLSELFENLPEIGDPEKPKLVFFFDEAHLLFTDIEP
                     AVEQKIEQMVRLIRSKGVGVYFVSQNPLDIPEVVLGQLGNRVQHALRAFTPRDQKAVK
                     AAAETFRQNPKLKTETVLTELAVGEALVSMLDENGSPEVVERAKVIPPRSQVGAITLE
                     QRKQIINSSVLAGHYEKAIDRESAYEKLQARAGEKTQSAGTPPVTESESTTERPQSSV
                     LSDALGTVTAAFQPTIGPRGGVHDSFATSMAKSAMRAASSSIGRQIARGLLGGILGGG
                     GRRR"
     gene            complement(2061..2465)
                     /locus_tag="VIS53_04765"
     CDS             complement(2061..2465)
                     /locus_tag="VIS53_04765"
                     /inference="COORDINATES: protein motif:HMM:NF009150.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEY5767127.1"
                     /translation="MPWAKSSKSGHLRRGARGEKLACRFLKRSGYKILFRNFRGRSGG
                     EIDIVCRDNDTLVFVEVKTRTREDFGRPFAAVDRDKRKRISRGALAWLRMLDNPDILF
                     RFDVVEVIVADKAKARVELIRNAFPLSKPYLY"
     gene            complement(2380..>2814)
                     /locus_tag="VIS53_04770"
     CDS             complement(2380..>2814)
                     /locus_tag="VIS53_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEY5767128.1"
                     /translation="DRINILRASHRAMRLALEALLEPPDHVLIDGLPVIPFPLPQTAI
                     IDGDCISLSIAAASVIAKVTRDRIMRDFCAQFPHYCFSQHKGYGTELHLLKLHEFGPC
                     PIHRRSFEPVAQPLLALGEIVQIRSSPARRARREISVPVPEA"
BASE COUNT          626 a          776 c          777 g          635 t
ORIGIN      
        1 ccgcaagcct cgcgctaagt agcgcagctt ttgccgcggg tgcgaagact tatgaggtca
       61 cagggccggt cctggaagtg aatgattcaa tgatcgtggt gcagaagggg aaagaccgtt
      121 gggaaattaa tcgcgacgcg aataccaaag tcacaggtga cgtcaaagtt ggcgataaag
      181 ttcatgtcac ctatacaatg tccgcaaccg acatcgaagt gaaagcgggc aagggcgcta
      241 agaaagaagc gaaggctgcg ccaacgccat aaactgagaa tgacttagat cgccggatgc
      301 gcttcgcgtg tccggcgatt tcttgtgtgg ccacgtcgct gtgcgacgtc ccggacacgg
      361 cccgcaaggc cgtggcgcta catcaccttc ggtcgtcaga gaccgccgct acagagaagc
      421 ggatgcgttt cggagtttga cacaaacgcc gctacaatta cctgcgtcgt ccgccgccgc
      481 cgaggattcc gccaagcagg ccgcgagcga tttgccggcc gattgagctg ctcgcggcgc
      541 gcatcgcgct cttggccatt gaagtagcaa acgaatcgtg aacaccgccg cgcggaccga
      601 ttgttggctg aaaggcagca gtcacggttc ccaatgcgtc cgaaagaact gaggattgcg
      661 gtctttccgt tgtagactcg ctttctgtca ctggcggcgt gccagcgctt tgggtcttct
      721 cccctgctct cgcctgcaat ttttcataag ctgattcccg atcaatcgcc ttttcgtagt
      781 gacccgcgag caccgatgaa ttgatgattt gcttccgctg ctccaacgtg atcgcgccaa
      841 cctgactgcg tggcgggata actttcgcgc gctcgacaac ttccgggctg ccattttcat
      901 ccagcattga tacaagcgct tcgcctacag ctagctcggt gagcaccgtt tcagtcttca
      961 gtttggggtt ttgccgaaat gtctcggcag cggctttcac tgccttctga tcgcgcggag
     1021 taaaggcgcg taaagcgtgt tgcacccgat tgccgagctg cccaagaaca acctctggaa
     1081 tatcgagcgg gttctggctg acgaagtaaa caccgacgcc tttggaacgg atcagtcgca
     1141 ccatctgctc aattttctgt tcaactgccg gctcgatgtc cgtaaagagc agatgcgctt
     1201 catcaaaaaa gaaaacgagc ttcggttttt ccggatcgcc aatttcagga agattctcaa
     1261 acaactccga cagcatccag agcagaaacg tcgcgtaaac tttcggcgac ttttgcatca
     1321 gcttgtcagc agcaagaatg ttaatgacgc cgcgcccatt ttgcgtctgg attaaatctt
     1381 cgagatttaa cgcaggctca ccaaaaaatt tatctgctcc ctgcgattcc agcgcgagca
     1441 ggttgcgctg gatcgttccg gcgctggcag cggaaatatt tccatactgg gttttaaatt
     1501 ggtcggcgtt gtcggcgacg tactgcaaca tcgatcggag atctttgaga tcgaggagaa
     1561 gtaacccgtt atcatcggcg attttgaaaa ccatgttgag aacgcccgcc tgcgtgtcgt
     1621 ttaaattcag caatcgtccg agtagcaatg ggcccatttc cgaaaccgtc gcgcgcacgg
     1681 gatgtccctg ctcaccgaac acatcccaga aaacgaccgg gcaggcttcg ccggtaaaat
     1741 tgccgatttt aagctccttg gcccgttcga cgattttcgg attgttcgcg cccggctggc
     1801 tcaggccggc gagatcgcct ttgacgtcgg ccatgaatac cgccacacca cgggcactaa
     1861 aattttccgc gagtgtttgc agtgtgaccg tttttcctgt gcccgtggcg cctgcgatta
     1921 acccgtggcg gttcgccatt ttaggcagca aaaaaatcgg ctccttggat tgcgcgacga
     1981 gtatgggttc ggccatgacg cagaattatg attgtgccaa cggtagcgtc tttgtccagc
     2041 gcggacgaaa ggcttccgga tcagtacagg tatggtttcg atagcggaaa cgcatttctg
     2101 attaactcaa cgcgcgcctt cgctttgtct gcgacgatta cctccaccac atcgaagcgg
     2161 aaaagaatgt cggggttatc gagcattcgt agccacgcca gcgcgccgcg tgagattcgc
     2221 ttccgtttgt ctcggtccac tgccgcgaat ggccggccga agtcttcgcg agtccgagtc
     2281 tttacttcga caaacaccag tgtgtcgttg tcgcggcaca caatgtcgat ttcgccgcca
     2341 ctgcgtccgc ggaaattgcg gaaaagaatt ttgtagccgc tacgcttcag gaaccggcac
     2401 gctaatttct cgccgcgcgc gccgcgccgg agatgaccgg atttggacga tttcgcccaa
     2461 ggcaagaagc ggttgcgcca ctggctcgaa agatcggcga tggatcgggc aaggaccgaa
     2521 ttcatggagc ttcaaaagat gcagttctgt tccgtaacct ttgtgctggc tgaaacaata
     2581 gtgcgggaac tgcgcgcaaa agtcacgcat gatccggtcg cgggtgacct tcgcaataac
     2641 gcttgccgca gcgatactca agctgatgca atccccatcg ataattgccg tctgcggaag
     2701 tggaaaagga atcaccggca aaccatcaat taaaacgtgg tccggcggtt cgagtagcgc
     2761 ttcaagcgcg aggcgcatcg cacggtggct ggcgcgcagt atgttaatcc gatc
//
LOCUS       DATDAJ010000193         6519 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1128605, whole genome shotgun sequence.
ACCESSION   DATDAJ010000193 DATDAJ010000000
VERSION     DATDAJ010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6519
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1128605"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..3152)
                     /locus_tag="VIS53_04775"
     CDS             complement(162..3152)
                     /locus_tag="VIS53_04775"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY5767129.1"
                     /translation="MAKEASSANPSIPLHEVLKAEFAVLHGKLPPDPPNSTDPNTRLR
                     AIWAAVHELPEKRAALCISGGGIRSATFGLGVLQGLARCGLLDKFHYLSTVSGGGYIG
                     SWLSAWINRAGLTSVTTQLAHQSEHTRPNPEPLEIQNLRSYSNYLSPRLGFFSADSWT
                     LVGTYLRNLMLNWFVIIPLLAAFLALPWIFSSIVMMDPPLRTDALFWSGAALVVIGVA
                     YMGLNLPSGGDRRWNQKRFLLFCLLPLFLASVLMTIHWAWFNYYGRSLIALPFFGFGQ
                     PQTWVPFLYLGIALHIVSWLTSLLPAHGFRPLEFLAVIVSGALGGVVLWLGAQKLFPH
                     PVMQMELYICIAVPGFMALFFLAIMAFAGMSSRWTEDPDREWWGRAAGWLLAIALSWL
                     IASGLVVFGPLSLKWTWSFITAGGLAGLLTVLGGRSPMVAASEKERATASPLGLILSK
                     ASTIAALIFAAILLILITQATTSVMKKLIQAYHIKLSYQAMLNSKSGLLGRPEEYLNV
                     IFYTPWWLVVPFGALLLLASVVMARLINANKFSLHGMYRERLIRAYLGASNSNRNENP
                     FTGFDENDNIKMRDLWVQEKFGRKLMPVINIALNLVSGEKLGWQERKAQSFTVSPLHC
                     GSSAMHPGYRSTTGADGTVYGGPQGISLGSAITISGAAASPNMGYHSSPFVTFILTLL
                     NVRLGAWLGNPGEAGDHTFHLGYPESSVQPIIDEALGLTNDRSPYVYLSDGGHFENLG
                     LYEMVLRRCHFIVISDAGQDPECSFADLGESVRKIRIDFGIPIEFESMTIHPRSAIDA
                     LKSKCQKGHNCAIGRIRYSAVDPDVNGKKAPDGIIIYIKPACYGEEPRDIYEYFKRSE
                     TFPHESTADQFFAESQFESYRMLGAHTMEKLCTDCDGQFRRFDGDFRSLISVIFGSHL
                     QIEVPKWLKELIQPSPSASDAAGAVGEPNKNCTVATALPRFGLRSLLDLLQTWISIAY
                     PISRLIDLRWINWNRARNFFASRH"
     gene            3308..3381
                     /locus_tag="VIS53_04780"
     tRNA            3308..3381
                     /locus_tag="VIS53_04780"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3342..3344,aa:Arg,seq:tct)
     gene            complement(3415..4497)
                     /locus_tag="VIS53_04785"
     CDS             complement(3415..4497)
                     /locus_tag="VIS53_04785"
                     /inference="COORDINATES: protein motif:HMM:NF013222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional activator/DNA
                     repair protein Ada/methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEY5767130.1"
                     /translation="MKTLELLPPTETMYRALVNRDPSFEGIFYIGVRTTGIFCRPTCS
                     AKKPARENVDFFATSSDALESGYRPCLRCHPLDPNARPPKLIERLRAEVERAPDGRLT
                     DKELAALSIDPSTARRQFMRHYGMTFQAYHRARRIGLALNQVRQGDRVDQARDGSGFE
                     SESGFRDAFTKIFGESPTNARTHAPLFAERIDSPLGPMIAVADDQGLRLLEFIDRRAT
                     ERELSILRKRLRTNVVPGKHRYLDTVCSQLRDYFAGRKLEFEVPLAPVGSEFQLRAWK
                     ILQSIPVGETRSYSWMAKRLGDENARRAVGRANGTNMICIVIPCHRVIRADGTLCGYG
                     GGLWRKKWLLDHEQRYAGGRKAGSDQ"
     gene            complement(4577..5044)
                     /locus_tag="VIS53_04790"
     CDS             complement(4577..5044)
                     /locus_tag="VIS53_04790"
                     /inference="COORDINATES: protein motif:HMM:NF018430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1203 domain-containing protein"
                     /protein_id="HEY5767131.1"
                     /translation="MKTSSFRIVPLPTEIADAARHVANAGAADHALITVDEPGSAPCR
                     HCLRWAQPGERVILFPYAAIPSGQPYSETGPIFVHANECPRYSATNEYPADFRNGRVF
                     RAYDSKYNIIDAQIVNGSEPEVVIESLFQNPDTAFVDVRSITRGCFTFRVRRA"
     gene            complement(5209..6129)
                     /gene="bla"
                     /locus_tag="VIS53_04795"
     CDS             complement(5209..6129)
                     /gene="bla"
                     /locus_tag="VIS53_04795"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF033103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA];
                     GO_process: GO:0046677 - response to antibiotic [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class A beta-lactamase"
                     /protein_id="HEY5767132.1"
                     /translation="MVAALLLLLAAATGGASSASPTAQRDGAASQSSALQKGNTSKIH
                     FEDRIAAVERRTGARIGVAALDSGSGKRLDYRSEERFPMCSTFKFLAAAAVLRRVDGE
                     KEKLDRFVSYAEKDILEYAPVTKAQVKDGGMTLGALCAAAIEQSDNTAGNLLLDVIGG
                     PAGLTNFVRSIGDEKTRLDRKEPELNSAIPGDERDTTSPAAVCANMQRLLLGNVLSES
                     SRHQLEDWLRHNKTGALMIRAGISKTWTVGDKTGRCANGATNDVAIIRPPGRAPILIA
                     IYSIGSRSSADDRAATVAEAARAAVEFLSP"
     gene            complement(6123..>6519)
                     /locus_tag="VIS53_04800"
     CDS             complement(6123..>6519)
                     /locus_tag="VIS53_04800"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY5767133.1"
                     /translation="SFLKNSDKSRAGGEIVAEWKPEKKYEAFDGVLNGGIIGTLLDCH
                     CNWTAAYHLMKRAGENRPPCTVTAEYAIKLLRPTPTNDSVFLNAKVVEITDDRATIEG
                     TLSASGKICARCRGVFVAVKEGHPAYHRW"
BASE COUNT         1499 a         1862 c         1748 g         1410 t
ORIGIN      
        1 agcggccgtg gcaggattgc gaccggatgt tttattatgc catgcgttgc agcggggttg
       61 gcgcgaccga agccaagacc atgtattacg ctctctacaa attcgggcat cattggaaat
      121 ttcccatcaa gcgcgccaaa cctgtgaaat atgaaggcgg gctagtggcg agaggcgaag
      181 aaattccgcg cgcgattcca gttaatccaa cggagatcaa tcaggcgcga gattggataa
      241 gcaatactga tccaagtctg gagcagatcg agcaacgagc gcaaaccgaa gcgtggtaac
      301 gccgtagcga ccgtacaatt tttattcggc tctcccacag cacctgcagc gtcggaggcg
      361 cttggagatg gttggattaa ctctttgagc cacttcggca cttcgatctg caagtggctt
      421 ccaaagatca cactaatcaa actgcgaaaa tctccatcga atctgcgaaa ctgtccatcg
      481 caatctgtgc aaagcttctc catcgtgtgc gccccgagca ttcggtagct ttcgaactgc
      541 gattcggcga aaaactggtc agcggtgctc tcgtgcggga atgtttcgct cctcttaaag
      601 tattcgtaaa tgtcgcgtgg ttcttcccca taacaggctg gctttatgta aataattata
      661 ccgtcgggcg ccttctttcc gttcacgtcc ggatccaccg ccgaatagcg gatgcgacca
      721 atggcgcagt tgtggccctt ctggcattta ctcttcaatg cgtcgattgc actgcgcgga
      781 tgaatggtca tcgactcgaa ctcaatcggg atcccaaaat cgatccggat tttgcgcacg
      841 gattcgccca gatcagcaaa tgaacattcg ggatcctggc ctgcgtcgct gattacgatg
      901 aaatggcagc gacggagcac catttcgtag agaccaagat tttcgaaatg gccgccatcg
      961 gagagataca cgtacggact tctgtcgttc gttaggccca aggcttcgtc gataatcggc
     1021 tgcacactgc tctccggata tccaaggtga aatgtgtgat cgcctgcttc gccgggattt
     1081 ccaagccatg cgccgagccg cacattgagc aatgtcagga tgaaggtgac aaaaggggat
     1141 gagtgatagc ccatattagg actggcagcg gcaccggaaa tcgtaatcgc cgatccgagc
     1201 gagatacctt gcgggccgcc atacacggtc ccatccgcgc cggttgtaga gcgatagccc
     1261 gggtgcatcg ctgacgagcc gcagtgcaac gggctgaccg tgaagctctg cgccttgcgt
     1321 tcctgccagc caagcttttc gccagaaacc agattgagcg cgatgtttat aacgggcatc
     1381 agtttcctgc caaatttttc ctgcacccaa agatcgcgca ttttgatgtt gtcgttctca
     1441 tcgaatcccg tgaatggatt ttcgttccgg ttcgaattcg acgcgccgag gtaagcgcga
     1501 atcaaccgtt cgcgatacat tccgtgcaat gaaaacttgt ttgcgttgat cagacgtgcc
     1561 atcacgacgc tcgcgagcaa aagtagcgcc ccgaacggaa ccaccagcca ccatggcgtg
     1621 tagaaaatca cgttaagata ttcctcagga cgtccgagca gcccggactt ggagttcaac
     1681 atcgcctggt aactcaattt aatgtgatag gcttgaatca acttcttcat caccgaagta
     1741 gttgcctggg tgatgagaat taagaggatc gccgcaaaga tcagcgccgc gatcgtcgat
     1801 gccttggaca aaataagacc gagcggactc gcggtcgccc gctccttttc gctcgccgca
     1861 accatcgggc tgcggccgcc aaggacggta agaagtcctg ccagacctcc ggcagtgatg
     1921 aacgaccacg tccattttag cgaaagcggt ccgaagacga ccaatccgct ggcgatcagc
     1981 caactaagag caattgccag caaccaacca gctgcacgcc cccaccattc acgatccggg
     2041 tcctcggtcc aacggctcga cattccggcg aatgccatga tagccagaaa aaacagtgcc
     2101 atgaaaccgg gaacagcaat gcaaatgtac aactccattt gcatcacagg atgcggaaac
     2161 aacttttgcg cgcctaacca cagaaccacc ccacccaggg cgccagatac gattaccgcg
     2221 aggaattcca atggtcgaaa tccgtgcgcg ggaagtaacg acgtcagcca tgagacgata
     2281 tgcagcgcta ttccaagata gagaaacggc acccatgtct gcggttgccc gaagccgaag
     2341 aatggcaagg caatcagcga acgtccataa tagttgaacc aggcccaatg aatggtcatg
     2401 aggaccgagg cgaggaatag cggcaaaaga cagaacaaca ggaatcgctt ttgattccat
     2461 cgccgatcgc cgcccgacgg caaattcagt cccatgtaag cgacgccgat cacgaccagt
     2521 gcggctccgc tccagaatag cgcgtcggtt cgcagcggcg gatccatcat cacgattgag
     2581 ctgaaaatcc acggcagcgc gagaaacgcc gcgagcaatg gaatgatcac aaaccagttc
     2641 aacatcaggt tgcgcaaata ggtgccaaca agcgtccaac tatccgccga gaaaaacccg
     2701 agccgcgggc tgagataatt gctgtagctg cgcagattct gaatctcgag cggttccgga
     2761 ttgggtctcg tgtgctcgct ctgatgtgcg agttgagtgg taacacttgt taggccggca
     2821 cggttaatcc aggcgctcag ccaactgccg atgtatccgc cgcccgagac ggtggaaaga
     2881 tagtggaact tgtcgagcaa accgcagcga gcgaggccct gcaacactcc cagtccaaat
     2941 gtcgcgctgc gaatgccgcc accggaaatg cagagcgcgg cacgcttttc cggcagctcg
     3001 tgcacagccg cccagattgc tcttaagcgg gtgtttgggt cggtcgaatt gggaggatca
     3061 ggcggtaatt ttccatgcaa caccgcgaac tcggccttca gcacttcgtg caatggaata
     3121 gagggattgg ccgatgaagc ttccttcgcc atggcaggca aaccgggcgg tctgtgccct
     3181 agcgtttatc aagtctgtag cggtgcgtca atcctcgctc tgcaaccaag tgcgtttcga
     3241 tgaaatgcac tggctgctca gcagctttca ttcgtcgcga aacgcggtat atgtctgtgc
     3301 tcatcctgcg cccgtagctc agccggatag agcaacggat ttctaatccg taggtcgaag
     3361 gttcgagtcc ttccgggcgc gtaggcagga caccttacta atcaccgatc ccgattactg
     3421 atcactaccc gcttttcgac cacccgcgta gcgctgttcg tgatcgagca gccatttttt
     3481 gcgccacaaa ccgccgccgt atccgcacaa cgtgccgtcg gcgcggatca cgcggtggca
     3541 tgggatgacg atgcaaatca tgttcgttcc attcgcgcga ccaactgcgc gccgcgcatt
     3601 ttcatcgccc aacctctttg ccatccatga ataagaacgc gtttcgccga ccggaatgga
     3661 ctgcaagatt ttccacgcgc gcaattggaa ttccgagccg acgggagcca acggaacttc
     3721 aaactcgagc ttcctgccgg cgaagtaatc cctcagttgt gaacagacgg tatcgagata
     3781 ccgatgtttc ccaggcacga cattcgtgcg caatcgtttt cgcaaaatcg acagttcgcg
     3841 ttctgtcgcg cgccggtcga tgaattctag caaacgcaag ccttggtcgt cagcgaccgc
     3901 gatcattggc ccgagcggcg aatcgattcg ctccgcaaac agtggtgcat gcgtcctggc
     3961 gtttgttggc gattcgccaa agatcttcgt gaacgcgtcg cggaaaccgc tttccgattc
     4021 aaaaccactt ccgtctctcg cttgatccac gcgatcccct tgcctcacct gattcaaagc
     4081 aaggccaatc cgacgcgcgc gatgatacgc ctggaatgtc ataccataat ggcgcatgaa
     4141 ctgtcgccgc gcggttgaag gatcgatcga gagcgcggcc aactccttgt ccgtcaggcg
     4201 tccgtccggc gcgcgctcca cttccgcgcg caagcgctcg atcagtttcg gcggacgcgc
     4261 gtttggatcg agcgggtggc agcgcaagca aggccgataa ccgctttcca gagcgtcgct
     4321 tgatgttgca aaaaaatcga cgttttctcg cgccggtttt ttcgccgaac atgtgggccg
     4381 gcagaaaatt ccagtggtgc gcacgccgat gtaaaaaatt ccttcaaagc tcggatcgcg
     4441 gttcaccagt gcgcgataca tcgtctcagt gggcggcaga agttcgagcg ttttcatgcg
     4501 aaaaagctaa gcgctcagaa tcgttgatgc atcgacgaaa ttcgagcagc gaattttgaa
     4561 cgcataccca tcctcatcat gcgcgtcgaa cccggaacgt aaagcagccg cgggtaatgc
     4621 tgcgtacatc aacaaacgca gtgtcgggat tttggaatag actttcgatc acgacttccg
     4681 gttcgctgcc attcacaatt tgcgcgtcga tgatgttgta ttttgaatcg taagcgcgaa
     4741 acacgcggcc attgcgaaag tcggcagggt attcgttagt cgcgctgtag cgcggacact
     4801 cgttggcgtg aacaaaaatc ggacccgtct cagaatacgg ctgaccagac ggaatcgcgg
     4861 cgtacggaaa cagaatgacg cgttcaccag gctgcgccca ccgcaggcag tggcggcacg
     4921 gagcgcttcc gggctcatcc actgtgatga gcgcgtgatc tgccgcaccc gcgtttgcta
     4981 cgtgccgcgc tgcgtctgca atttccgtgg gaagaggaac gatgcggaag ctcgaggttt
     5041 tcatgaacga tagctaaatc caacaacgcg agtcgcgcat cggcgaaatt caggcaagta
     5101 attctgtcgc cgcttccctg tgggaagcgc ggggctgata ggtacttaac acgttctatg
     5161 tggcgtcgcc cacagggcga cggctacaat taccggcatt ttgctgttct acggagataa
     5221 aaactccaca gcggcgcgcg ctgcttccgc aaccgttgca gcacgatcat ccgctgagga
     5281 tctcgaaccg atcgagtaaa tagcgataag aatcggtgca cgcccaggtg gacgaataat
     5341 ggcaacatcg tttgtagcgc cgtttgcgca tcgacccgtt ttgtccccga ctgtccatgt
     5401 tttggaaatg ccagcccgaa tcatgagtgc gccagtcttg ttgtgccgca accaatcttc
     5461 gagctgatgc cgtgaagatt cggataacac attgcccagc agcaaccgtt gcatgtttgc
     5521 gcacaccgcc gcggggcttg tggtgtcgcg ttcatcgccg ggaatggcgc tattcaattc
     5581 cggttctttg cggtccagtc tcgtcttctc atcgccgatg ctgcgcacga agtttgtcag
     5641 tccagcgggt ccgccaatta catccagcaa aagattgccg gccgtgttat cgctctgttc
     5701 gatcgccgct gcgcacaagg cgccaagcgt catcccaccg tctttaacct gagccttcgt
     5761 gacgggcgca tattccagaa tgtctttttc ggcatacgac acgaaccgat ctaatttctc
     5821 tttctctcca tctacgcgcc tcaaaaccgc cgctgcagcg aggaatttaa acgtgctgca
     5881 catcgggaaa cgttcttccg atcggtaatc gagacgttta ccgctgccac tgtccagcgc
     5941 agctacaccg atccgagcgc cggttcgccg ctcgacagcc gcgatccgat cttcgaaatg
     6001 aattttactg gtgtttccct tttggagggc ggagctctgc gacgccgcac cgtcacgctg
     6061 ggcagtcggg ctcgcagagc tcgcccctcc agtggccgca gcgagcaaca aaagcaaagc
     6121 agctaccatc gatgatacgc gggatggcct tctttcaccg ccacgaagac cccccggcat
     6181 ctggcgcaaa tctttccgct ggcgctcagt gttccctcga tggttgcacg gtcatcagtg
     6241 atctcaacaa ccttggcatt gagaaacacg gagtcgttcg taggtgtcgg ccgcagcagt
     6301 ttgatggcgt attccgcagt aaccgtgcaa ggcgggcgat tttcgcctgc gcgtttcatc
     6361 agatgatagg ctgccgtcca gttacaatgg caatcgagta atgtgccgat gatcccgccg
     6421 ttcaaaactc cgtcgaacgc ttcgtatttt ttctctggtt tccactcagc gacgatttcg
     6481 ccgcctgctc gcgatttatc ggagttcttc aggaaacta
//
LOCUS       DATDAJ010000194         7299 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1130068, whole genome shotgun sequence.
ACCESSION   DATDAJ010000194 DATDAJ010000000
VERSION     DATDAJ010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7299
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1130068"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VIS53_04805"
     CDS             complement(<1..424)
                     /locus_tag="VIS53_04805"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY5767134.1"
                     /translation="MQSVEQRDEVEMLSLMLLIRRFEERASQQYQAQKIGGFCHLYIG
                     QEAVVTGAIAAVRPDDYVITAYRDHGHALARGTSVNACMAELFGKETGCSRGLGGSMH
                     FFDKRHNMYGGHAIVAAHVPLGVGLAFAIKYRGEDRVTL"
     gene            complement(427..1026)
                     /locus_tag="VIS53_04810"
     CDS             complement(427..1026)
                     /locus_tag="VIS53_04810"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HEY5767135.1"
                     /translation="MIPALLLIVSAVVFRIVTGFFGHSDSIGWLNFAPIAAIALCAAA
                     YFPRKYKFSVPMIALLISDIVLNVHYGFSFFNPFVLSHYLGFAIIGCLGLLLQSRASW
                     KTLLPGSIAASLIFYVVTNSVSWIYDPGYAKNFAGLIQALTVGLPQYSATPSWMFFRN
                     SLVSDLVFTFLFVVCMNAGRKMGRSRERAAQFRPLAARY"
     gene            complement(1178..1423)
                     /gene="rpsT"
                     /locus_tag="VIS53_04815"
     CDS             complement(1178..1423)
                     /gene="rpsT"
                     /locus_tag="VIS53_04815"
                     /inference="COORDINATES: protein motif:HMM:TIGR00029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEY5767136.1"
                     /translation="MANTRSAGKRARQTLRRAAHNRSVKTHLRRLQKQIRSAPERTAE
                     QIRAAISAIDKAAKNGVIHRNAANRRKARLNKALAAK"
     gene            complement(1469..2353)
                     /locus_tag="VIS53_04820"
     CDS             complement(1469..2353)
                     /locus_tag="VIS53_04820"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5767137.1"
                     /translation="MLRPVAVILCVISATSAFATAPLDTSNQLIISVRDQKLVLLRNG
                     SKVATYPISTSMFGLGDAFGRMTTPLGYLAVEKKIGDNVPVGAVFHKRRLTGEVLQPN
                     APGRDPITTRIIWLRGLEAQNAHAFQRCIYIHGTPEENKIGRPASYGCIRMKSKDVAE
                     LYDQVSLGAVVQIIPDRLPKMEKAKPRQEMSGGVVAANTTPQPAPQIAATKAAKITTQ
                     PAPQIAATTVAKATAQPPPEITATKAANVTPQAPPQISASMLAMPPSSSLSLEQMRTA
                     GALAGARQKAKLAANKRL"
     gene            complement(2386..3891)
                     /locus_tag="VIS53_04825"
     CDS             complement(2386..3891)
                     /locus_tag="VIS53_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase family protein"
                     /protein_id="HEY5767138.1"
                     /translation="MQESIGHIIWSACYLSVLIGLSAYGIHRYFIIYLYLKNRKRPPV
                     PTRYFENLPKVTVQLPIFNEVYVAERLLRSVSELDYPQELLQIQVLDDSTDETCEITA
                     ACAEELRQRGFNVQRIHRTDRTGFKAGALSVGLAAAEGEFLCILDADFVPEKDLLKRT
                     VHFFTDPKVGMIQTRWGHLNRGYSLLTRMQAIFLDGHLLLEQIARSRSGRFFNFNGTA
                     GLWRRSCIEQSGGWQHDTLCEDLDLSYRAQLAGWKFIYLSDVVTPAELPVDMNGFKSQ
                     QHRWTKGSVQTCKKLLPSVWRSRLPFPIKLEATGHLMSNFAYLLLVLLCVLLYPSTGG
                     PPVGWVRTVLVDVPIFLTASASVGLFYICAQRELHPRTWIKELLFLPCLLALGIGLSL
                     NNARAVLEAMINHKSDFTRTPKYGIERKSQPWRSCKYRPLKSALPLAELAFAIYFSYF
                     VVHAIMHRQFLSVPFLLMFQAGFLYVCLSSFVSRWSKFNLGSSRARSTIPA"
     gene            4203..6668
                     /locus_tag="VIS53_04830"
     CDS             4203..6668
                     /locus_tag="VIS53_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5767139.1"
                     /translation="MTKRRRERFERSKIIIPILLAGWIPSVLTLIVSYTILRDTLESR
                     ILRDRQTLVQLLGHVVRTDLSRSSEIINYYESLPEVARILSSPNPAPAAQQWVNSAFY
                     SHPNVDGMFLAGPDGALLGSIPSTPEMVGKDFGANYWREEATASEQPVVSSIHPRFSD
                     NRLVANIVAPVRAPDRTLLGFVGDSVLIERIGKRLSTIEFSDRFVFQVLDQKGAALFA
                     NDFKPNPGTTSSESGELLNKIRQSKDGHFEYHDNLYSFSHIESTSWVALVEQPLAVAY
                     KPVHDLLGRMTVLTAWLVVLTGVFAWLGSRFYQRQLDSKQQLEREVIFNEKMLANMPG
                     GIALIDPVSRRFLHANEAFARMAERFGELPAGRDLTQTTCDDIKIAPPGAVERVLNFG
                     TPFQLIEHPLKDKSGITHFLDINLLRLQGAKETVQGVLYLVEDKTRDVTLRQELIAAN
                     AAKDQFLAQLSHELRSPLTPVIAMVGELEAEVPDSKPVREALEVVRRNVELEARLIDD
                     LLDITRISKGKLQLSFELISIHQILQRAYEICRAEIEAKNLEVKFDLRAVHTYVEGDP
                     ARLQQVFWNLIKNSVKFTPEKGRISIETLNPAPDKIEIRVIDTGIGIESETIDKIFDA
                     FEQGQSDITRRFGGLGLGLTISKTLIDAHGGHIRVQSSGKNQGAIFTVELNTVESPIE
                     RDGHGEDRPTDRKPDVAVASHRRVLLVDDHHDTCLGMKRMLERRGYQITIAHSAEQAV
                     EKVRTQEFDLLISDIGLPDRSGYELMREVRLNKRLPGIALSGFGSEQDINQAREAGFA
                     EHLTKPINFERLEKTIQSLLSDS"
     gene            complement(6729..7085)
                     /locus_tag="VIS53_04835"
     CDS             complement(6729..7085)
                     /locus_tag="VIS53_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY5767140.1"
                     /translation="MAKLTKRDIVVSISNQTGMVQHQVFDVVQKTLDKITDSLANNIP
                     VELRNFGVFLPRLTRPRIGRNPNQPGSSFVIPPRATVKFKAGKIMRQRVEKLSRQLKE
                     AEERKVNTEVGAHAGE"
BASE COUNT         1716 a         1979 c         1992 g         1612 t
ORIGIN      
        1 aaagcgtgac gcgatcctcg ccccggtatt tgatagcaaa ggccaaccca acccccagcg
       61 gtacgtgggc ggcaacgatc gcgtggccgc catacatgtt gtgtcgcttg tcaaaaaaat
      121 gcatcgaccc gccgagtcca cgcgagcagc cggtctcttt accaaagagc tccgccatgc
      181 aagcattcac gctcgtaccc cgggccaagg catggccgtg atcacggtaa gcagtgatta
      241 cgtaatcatc cggccgcacg gccgcgatcg ccccggtcac gacagcttcc tgaccaatgt
      301 aaaggtgaca aaagccgcca atcttctgcg cttgatactg ctgactggcg cgttcttcga
      361 agcgccggat caacagcatt agcgagagca tctcgacttc gtcgcgctgc tccaccgact
      421 gcatagttaa tatcgagccg cgagaggacg gaattgcgcg gcgcgttccc tcgatctccc
      481 catttttcgc cccgcgttca tgcaaacaac aaacagaaaa gtgaagacca gatcgctgac
      541 gagtgaatta cggaaaaaca tccagcttgg ggtcgcactg tactgaggca atccaaccgt
      601 gagcgcttga ataagcccgg caaaattctt ggcataaccg ggatcataga tccatgacac
      661 ggaattcgtg acgacgtaga aaatgagcga cgcggcgatc gaaccgggaa ggagcgtttt
      721 ccacgacgcg cggctttgca gaagcaaacc gaggcagccg ataatcgcaa aaccaaggta
      781 gtgcgagaga acgaatggat taaagaatga aaacccgtag tggacattca acacgatatc
      841 agagatcaac agtgcgatca tcgggacgct gaatttatac ttccgtggga agtaagcagc
      901 ggcgcagagc gcaatcgcgg cgatgggggc gaagttcagc cagccgatcg aatcagaatg
      961 tccgaagaag ccggtgacta tgcgaaacac taccgcggat acgataagaa gaagcgcggg
     1021 aatcattcca cagaatctat ccggccacta agatatgcaa tgggcatttg gaactcgtca
     1081 ttccgagcgc agtcgaggaa tcccgttgca tgactcaaag tgaactttcg cgggatcctt
     1141 cgactgccgc ttccctccgc tcaggatgac agctcgttta tttcgccgcg agcgccttgt
     1201 tcagccgcgc cttgcgacga ttggcggcgt tgcgatgaat gacgccattt ttggctgctt
     1261 tgtcgatagc agaaatcgcc gcgcgaatct gttcagcggt gcgctctggc gctgagcgga
     1321 tttgtttttg aagtctgcgc agatgcgtct taacgcttcg gttatgggcc gctcgtctaa
     1381 gcgtctgtcg ggcacgttta ccggctgatc tcgtgttggc catcggcgat caagaatgtt
     1441 atcgagcgaa cgcccgctgg cgcggttgtt ataagcgttt gttcgctgcg agtttcgctt
     1501 tttgccgggc gccggcaagc gctccagccg tccgcatttg ttccaagctg agtgagctgg
     1561 aaggtggcat ggcgagcatg gaggcactta tctgcggtgg cgcctgcggc gtgacgttgg
     1621 cagccttcgt agcagttatt tccggcggcg gctgtgccgt tgcctttgca accgtcgttg
     1681 cagctatctg cggtgccggt tgcgtcgtta tctttgcagc cttcgtggca gctatctgcg
     1741 gtgccggctg cggcgttgtg tttgcagcga cgacaccgcc gctcatttcc tgacgcggct
     1801 tcgccttttc cattttgggc agccgatcag gaataatttg cactacagca ccgagcgaca
     1861 cctggtcgta gagctcggca acatccttcg atttcatgcg gatgcagccg taacttgcgg
     1921 ggcgaccaat tttgttttcc tcaggcgtac catgaatata aatgcagcgt tgaaacgcat
     1981 gcgcgttctg cgcctcgagt ccgcgaagcc agatgatgcg cgtagtgatg gggtcgcggc
     2041 caggagcgtt gggctgaaga acttcacctg tcaatcgcct cttatggaaa acagcgccga
     2101 ccggcacatt gtcaccgatc tttttttcta ccgctaaata accgagagga gtggtcattc
     2161 gcccaaacgc gtcgcccaag ccgaacattg acgttgatat gggataggtc gccactttgc
     2221 tgccgttgcg cagaagcacc agcttctgat cgcggacgct gatgatcagc tggttcgaag
     2281 tgtccagcgg cgcggtcgca aacgcggatg tagctgagat tacacaaaga atgactgcaa
     2341 cgggccgaag catggcccaa tcttttactc gacaatttcg atttgtcacg cgggaattgt
     2401 gctccgagcc cgtgaactgc caagattgaa ttttgaccaa cgactgacga aggaactgag
     2461 acagacgtag aggaatccag cctggaacat cagcagaaac gggaccgaca aaaactgccg
     2521 gtgcatgata gcatgcacga cgaagtagct gaaatagatg gcaaacgcca gctccgcgag
     2581 cgggagcgcc gacttaagcg gccggtactt acagctccgc catggctgcg acttgcgttc
     2641 aattccgtac tttggcgtcc gcgtgaaatc cgatttgtgg ttgatcatcg cttcgagcac
     2701 tgctcgcgcg ttgttgagcg agagaccaat tcctaatgca agcaaacatg gcagaaaaag
     2761 gagttctttg atccatgttc ggggatgcaa ctcgcgttgg gcacaaatgt aaaaaaggcc
     2821 gactgacgcc gatgctgtga gaaaaatggg aacgtcgacc aggactgtgc gaacccagcc
     2881 aactggaggt ccaccggtgg aaggatataa aaggacgcaa aggagtacca gcagcaggta
     2941 tgcgaaattc gacatcaaat gcccggtggc ttccagcttg attggaaagg gtagccggct
     3001 tcgccaaacg ctcggcaaca acttcttgca tgtctggact gaacccttcg tccagcgatg
     3061 ctgctgagat ttgaacccat tcatgtccac cggcagctcc gccggagtga cgacgtcaga
     3121 gagataaatg aacttccagc ccgcgagttg cgcccgatag ctcagatcga ggtcctcaca
     3181 caatgtatcg tgctgccacc ccccgctctg ctcgatgcat gaacggcgcc acagtccagc
     3241 tgtcccgttg aaattgaaaa accggccgct gcggctacgc gcgatttgct ccagcaaaag
     3301 atgtccatcc aaaaaaatcg cctgcatgcg cgtgagcagt gaatagccgc ggttcaaatg
     3361 cccccaccgc gtttggatca ttccgacttt tggatcggta aagaaatgga ccgtgcgttt
     3421 aagcaggtct ttttccggaa caaaatcggc gtcgaggatg caaagaaatt cgccctccgc
     3481 agcagcgagt cccacggaga gggcgccagc cttaaagccc gtccgatcag tccggtggat
     3541 gcgctggacg ttgaaaccgc gctggcgcaa ttcctcagca cacgccgcgg taatctcgca
     3601 cgtctcatcc gttgaatcgt ccagtacctg gatttgcaga agctcttgtg gataatcgag
     3661 ttcgctcacg gaacggagca gccgctcggc gacatacact tcattgaaaa tcggcaactg
     3721 caccgtcact ttcggcagat tctcaaagta gcgggtcgga accggcggcc gtttacggtt
     3781 tttcaaatac aaataaatga tgaaatagcg atggatccca taagccgaaa gcccgatgag
     3841 cacactcagg taacaagccg accagataat atgtccgatg ctttcttgca tggatattgc
     3901 tatggctgcc aatggatgag gcagtcaggc cgacatgatg caatttccaa caggtgcgtc
     3961 aattcaaaaa tcaaatggtt gccggtgaga accgccgtca catcgtgttg atatacagca
     4021 gtctcttatc ggttcgcaat tgcgatgcca ggcggtttgg cgatatcggt gttcgccggg
     4081 aaccgtgagt ctgaaaatcg gcgccctctc tacgggaatt ccttcttgcc tgagacgagc
     4141 agcaggttaa cggtgactca gtcggttttc tgctaaacac cggcatttta ttgggaaatt
     4201 tcatgacgaa acgaaggcgc gagcgtttcg agcgttcaaa gatcattatt ccgattctgc
     4261 tggcgggatg gattccgtca gtcctgaccc tgatcgtttc ctacacgatc ctgcgcgaca
     4321 cattggaatc acgcattttg agagaccggc aaacgctggt gcaattgctt ggccacgtgg
     4381 tcagaaccga tctcagccgt agcagcgaaa ttatcaacta ttacgagagc cttcctgagg
     4441 tcgcccggat tctcagttcg ccaaatcctg cccccgcagc ccaacagtgg gtcaactccg
     4501 ctttctattc gcatccaaac gttgatggga tgttcctcgc tgggccggat ggcgctttgc
     4561 tcgggtcaat ccccagcaca ccagagatgg tcggcaaaga ctttggggcg aattactggc
     4621 gggaagaagc gactgcatcg gagcaaccgg tcgtgtcgtc gattcatccc aggttctccg
     4681 ataaccggct tgtagccaac attgtcgccc ctgttcgcgc tcctgacagg acgcttcttg
     4741 gattcgtcgg cgactcggtt cttatagaga gaattggcaa gcgattgtcc acgatcgagt
     4801 tttccgatcg cttcgttttc caggttctcg accaaaaagg tgcagcgctc ttcgccaatg
     4861 atttcaaacc aaatcccggc accacttcat ctgagagcgg cgagctgctc aacaagattc
     4921 ggcagagcaa ggatgggcac ttcgaatatc acgacaatct ttattccttc agtcatatcg
     4981 aatcgactag ttgggtggca ttggtggagc agccgctcgc ggtagcctac aaaccggttc
     5041 acgatcttct cgggcgaatg acggtcctaa cagcttggct cgtggttctg acgggtgtgt
     5101 tcgcctggct gggcagccgg ttctaccaac ggcaactgga ttcaaagcag caactcgagc
     5161 gtgaagttat cttcaacgag aaaatgctgg cgaacatgcc tggcgggatc gctctaatcg
     5221 atcctgtttc tcgccgattt ctgcatgcca acgaggcatt tgctcggatg gctgaacgtt
     5281 tcggagagct gccggcgggt cgcgacctca cccaaaccac ctgcgatgat ataaagattg
     5341 cgcctcccgg ggcagttgag cgggtcctta atttcggaac gccgtttcaa ctgatcgagc
     5401 atccgttgaa agataagtca ggcataacgc atttcctcga catcaatctg ctccgactgc
     5461 aaggggcgaa ggaaaccgtt caaggcgtgc tttatctggt ggaagacaag acgcgcgatg
     5521 tcacactgcg gcaggagttg attgccgcaa acgccgcaaa ggaccagttc ctcgcacaac
     5581 tatctcacga gttgcgaagc cctctcacgc ccgtgatcgc gatggtggga gaactcgaag
     5641 ccgaggtccc cgattccaag cccgtcaggg aagcgcttga ggtggtccgc cgaaatgtcg
     5701 aattggaagc acgcctcatc gacgatttgc tggacatcac tcgcatctcg aaaggcaaac
     5761 tccaactcag cttcgaactt atttccatcc atcaaatcct ccagcgcgct tacgagatat
     5821 gccgtgccga aatcgaggcg aaaaaccttg aagtgaagtt tgaccttcgc gcggttcata
     5881 cctacgtgga aggcgatcca gcgcgcctgc agcaggtttt ttggaacctg atcaagaaca
     5941 gcgtcaagtt caccccggaa aaaggccgca ttagcatcga aactctgaat ccggccccgg
     6001 acaagattga aatacgcgtt atcgacaccg ggattggcat tgagtccgag acaatcgaca
     6061 aaatttttga cgcatttgaa cagggacaga gtgatatcac ccgtcggttt ggaggacttg
     6121 ggcttggtct gacgatttca aagacgttga tcgacgcgca cggcggacac attcgtgtcc
     6181 aaagctccgg aaaaaatcaa ggcgccattt ttacagtcga gctaaacacc gttgaaagcc
     6241 ccatcgagcg ggatgggcac ggggaggatc gaccaactga tcggaaaccg gacgtcgcag
     6301 ttgcgagtca ccggcgcgtc ctgctcgtag acgatcatca cgatacgtgt ctcggtatga
     6361 aaagaatgct cgaacgccgc ggctaccaga tcaccattgc ccattccgct gagcaggctg
     6421 tggagaaagt ccgtacacag gaattcgact tgctaatcag cgacatcgga ttgcccgatc
     6481 gcagcggcta cgagttaatg cgcgaagtgc gtctcaacaa acgtttgccg gggatcgctt
     6541 tgagcggttt cggcagcgaa caggatataa accaagccag agaagcaggc ttcgctgagc
     6601 atctgaccaa gccgattaat tttgagcgct tggagaaaac gatccagagc ttgctctccg
     6661 attcgtagag tagagacaac cggtcctgcg aatctgggtc acaggcgcaa tcgtccgctc
     6721 agatccagtc attcgccagc gtgtgcgccg acctctgtgt ttacctttcg ctcttccgct
     6781 tcttttaatt ggcgagagag cttttccacg cgttgccgca tgattttacc cgccttgaat
     6841 ttcaccgtcg cacgcggcgg aatgacaaaa ctgctacccg gttgattagg gtttcgtccg
     6901 atccgcggcc tggtaaggcg cggtagaaac acgccgaagt ttctcaactc aaccggaata
     6961 ttgttggcaa ggctgtcggt gattttatca agggtctttt gcaccacatc gaagacctga
     7021 tgctgcacca tcccggtctg attgctgatc gacaccacaa tgtcgcgctt ggttaatttc
     7081 gccatatcta ttttagtaat cgttccttgt gactctgccg gtggcccaat gaagcacaaa
     7141 aaagcaattt tttgaatccg gcatttcaac taacgtttgg ggagcggcgc ggtcgccaat
     7201 ctccgcgagc gggcggcgcg aggtaatgct ccggagcaat ctcatgcgcg gtgcggaaat
     7261 ggactttcgc cacttcgcgc agtgcctctg gcccgttct
//
LOCUS       DATDAJ010000195         2839 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1132963, whole genome shotgun sequence.
ACCESSION   DATDAJ010000195 DATDAJ010000000
VERSION     DATDAJ010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1132963"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2189
                     /locus_tag="VIS53_04840"
     CDS             <1..2189
                     /locus_tag="VIS53_04840"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY5767141.1"
                     /translation="SFEIFLHTRYVGQKRFSLQGAETLLVALETILHKCPDGGVEEIC
                     MGMAHRGRLNVLANFLRKSLKVIFTEFSENYIPDLVAGDGDVKYHLGYDAVRRLASGA
                     EIEIRLSSNPSHLEAGDPVVEGKARARQRIRGDTEHRKKVLPLLVHGDAAFIAQGIVA
                     ETLNLSQLHGYSTGGTIHVVVNNQIGFTTLPKDARSSRYATDIAKMIEAPIFHVNGDD
                     PLAVKFVSDLAFEFRQQFGRDVVIDLYCYRRYGHNEGDEPSFTQPDLYAKIEKRPSVT
                     QLYKRELLDAGTLTEDDAASLETEFALRLEMTRDEVNAIEKRRANQKAKFRESTAIFQ
                     PEYTSESEPTAISEKTLKTIVESLTRVPDGFEVQPKIQRIVIEHQRQVFEDGGPYEWH
                     FAEALAFGSLLLEGIPVRLSGQDSSRGTFSTRHSVLYDAKTGKPYVPLMHLAEKQARI
                     CIYNSPLSEAAVLGFDYGYSLEYPKMLCLWEAQFGDFVNGAQTIIDQFIVSAESKWQR
                     PSGIVLLLPHGYEGQGPEHSSARIERFLQECAEDNIQVCNLTTAAQYFHVLRRQMKRD
                     FIKPLIIATPKSLLRAKYASSPAEEFIHGRFEEILGSPEAGPADNVKRIIFCSGKVYY
                     DLLKYRSDRKIGDAAIIRIEQLYPLAEKRLREMLKPFPKNAKLVWCQEEPQNMGAWTF
                     IEPRLRTLLCTEVAYAGREASASPAVGALARHKREQARLVADAFSM"
     gene            2268..>2839
                     /locus_tag="VIS53_04845"
     CDS             2268..>2839
                     /locus_tag="VIS53_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY5767142.1"
                     /translation="MSQNYKDTLNLPRTDFSMKANLAAREPEMLRRWEEKRLYQEIQK
                     SRQGRELFVLHDGPPFANGDVHMGTALNKILKDFVVKSQTMLGKRAPYIPGWDCHGLP
                     IEYKVVKESRELSPLEVRKQCEAFARKFVNIQREQFKRLGVFGDWEHPYLTMDPKYEA
                     EILRAFAVFVEEGLVYEAQKPVFWSTGAQTA"
BASE COUNT          665 a          754 c          801 g          619 t
ORIGIN      
        1 aatcgttcga gatttttctg cacacccgct acgtcggaca aaaacgcttt tcgttacagg
       61 gagcggaaac gctgctggtc gctctggaga caatcctgca caagtgcccg gacggcggcg
      121 tcgaggagat ttgcatgggc atggcacatc gcggacggct caatgtgctt gcgaattttt
      181 tgcgcaaatc gctcaaagtc atcttcactg agtttagcga gaattacatt cccgatttgg
      241 tcgctggcga tggcgacgtg aaatatcatc tcggttatga tgccgtgcgc aggcttgctt
      301 cgggcgcaga gattgaaatc cgactctcgt cgaacccgag ccatttggaa gctggggatc
      361 cagtggtcga agggaaagcg cgcgcccggc aacgaattcg gggagacacc gagcatcgga
      421 aaaaagttct gccgctactc gtgcacggcg atgcggcatt catcgcacag ggaatcgtag
      481 ccgagacgct gaatttgtcg cagctacatg gttacagcac tggtggcact atccacgtcg
      541 tggtgaacaa tcaaatcggt ttcactacgc ttccgaaaga tgcgcgatcc tctcgttacg
      601 ccacggatat cgccaaaatg atagaggcac cgatttttca tgtgaatggc gatgacccac
      661 tcgcagtgaa gtttgtaagt gatttggcgt tcgagttccg ccagcaattc gggcgtgacg
      721 tggtaatcga cttgtattgc tatcgccgct atggccacaa cgaaggcgac gaaccgtcgt
      781 tcacacagcc cgatctctac gcaaagatcg agaaacgtcc atccgtcacc cagctttata
      841 agcgcgagtt gctcgatgcc ggaacactta ccgaagacga cgctgcttcg ctggagaccg
      901 agttcgccct gcgactcgaa atgacgcgcg acgaagtgaa tgcgatcgaa aaacgcagag
      961 cgaaccagaa agccaaattc agagaatcaa cggccatctt tcaacctgaa tacacaagcg
     1021 agtccgagcc gactgctatc agcgagaaga cgctgaaaac gatcgtggaa agcctcaccc
     1081 gtgtcccgga tggtttcgag gttcagccaa agatacaacg catcgtgatc gagcatcagc
     1141 gtcaagtctt cgaggatggc ggtccatatg aatggcattt cgctgaagcg ctcgcatttg
     1201 ggtcgttgct tcttgagggg attccagttc ggttatcggg gcaggatagt tcgcgcggca
     1261 ccttcagcac acggcattcc gtgctttacg atgcgaagac aggcaaaccg tacgtgccct
     1321 tgatgcacct ggctgaaaaa caagcgcgca tctgcattta caacagtccg ctgtctgagg
     1381 ctgctgtgct cggattcgat tacggctatt cgcttgaata tccaaaaatg ctttgcctgt
     1441 gggaggcgca attcggcgat ttcgtgaatg gtgcgcagac cattatcgat caattcattg
     1501 tgtcagcgga atccaagtgg cagcggccca gtggaattgt ccttttactc ccgcacgggt
     1561 atgaagggca gggcccggaa cattccagtg cgcgcatcga gcgtttcctc caggaatgtg
     1621 ccgaggacaa catccaggtc tgcaatctca cgaccgctgc acagtatttt catgtgctgc
     1681 gccgccagat gaaacgcgat ttcatcaagc cgctgatcat cgctacgccg aagagtctgt
     1741 tgcgcgcgaa atatgcgtcg tcgccggctg aagaattcat ccatggccgc ttcgaagaaa
     1801 ttctaggctc gcccgaagct ggtccggccg acaatgtgaa gcgcatcatc ttttgctccg
     1861 gcaaagttta ttacgatctg cttaagtacc gaagcgatcg caagattggc gatgccgcga
     1921 ttattcgcat cgagcagcta tatccgctcg ctgaaaaaag gcttcgcgaa atgcttaagc
     1981 catttccaaa aaacgcgaag ttggtttggt gccaggaaga accgcaaaac atgggtgctt
     2041 ggactttcat cgagccgcga ttgcgaacgc tcctttgcac cgaggttgcg tacgcaggtc
     2101 gcgaggccag cgccagcccc gccgtcggcg cgctcgctcg ccacaaacgc gagcaagccc
     2161 gcctcgttgc cgacgcgttt tcgatgtgac tctgacggtt gtcgccattg cgtagtggtg
     2221 actgcgttgc ttcgctggtt gacggatgtt agcgtcgccc gctcgccatg agccagaatt
     2281 acaaagacac attgaatctg ccgcgcacgg atttttcgat gaaggcaaac ctcgctgcgc
     2341 gcgagccgga aatgctcagg agatgggagg agaagcgcct ttaccaggaa attcaaaaat
     2401 cgaggcaagg ccgagaactc tttgttctgc atgatggccc gccgtttgcc aacggcgacg
     2461 tccatatggg cacggcgctc aacaaaattc tgaaggattt tgtggtgaaa tcgcagacga
     2521 tgcttggcaa gcgcgcgcca tatatcccgg gctgggattg tcacggctta ccgatcgagt
     2581 acaaagtggt caaggaatcg cgggagcttt ctccgctgga ggtccgcaaa cagtgcgaag
     2641 cgtttgcgcg aaagttcgtc aatatccagc gcgagcaatt caagcggctc ggcgtgttcg
     2701 gcgactggga acatccatat ctgacgatgg atcccaaata cgaagcggaa atcttgcggg
     2761 cgttcgcggt tttcgttgag gaaggcctcg tgtacgaggc gcagaagcct gtcttctgga
     2821 gcaccggcgc gcagaccgc
//
LOCUS       DATDAJ010000196         2124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1134029, whole genome shotgun sequence.
ACCESSION   DATDAJ010000196 DATDAJ010000000
VERSION     DATDAJ010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2124
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1134029"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VIS53_04850"
     CDS             <1..377
                     /locus_tag="VIS53_04850"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5767143.1"
                     /translation="VRPLWVAVQNDIIAGWLSFQSFYGRPAYHATAELSVYIAQSWQR
                     KGIGNALLSQAVVQAPDLGLKNLLGFIFAHNDPSLRLFKKFGFERWGNLPRVAELDGM
                     ERDLIIVGRHVVPKLGPGIDGA"
     gene            408..1295
                     /locus_tag="VIS53_04855"
     CDS             408..1295
                     /locus_tag="VIS53_04855"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HEY5767144.1"
                     /translation="MKKTTRVIEFESKQRILEKAQNYVASVDLFVDERDQAIPLLLRA
                     LKHADRELKREILFVLGTFANEQCIGPLYEIMTDSAEDEEIRQHAAIQISVMGPLLKD
                     AQSLIDKLLNDMASADRDLRLHATFALGWKGNVEAGIPLIERLYDSDEQVRQTAVNAL
                     CNLRDDRILPLLLERLEHGGSEQKHAILLNLWRFAAKRQDVIKVYLKCLEHDEPAMRF
                     DALACFSLLAETRDHIEVYRKLLKDTDPRIRGLAIKRLAEDAAQAAVQGFPREIEVLL
                     DDRDMKVKKAALKILAQRK"
     gene            1565..>2124
                     /locus_tag="VIS53_04860"
     CDS             1565..>2124
                     /locus_tag="VIS53_04860"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767145.1"
                     /translation="MEIACGTGGILGRLSESYDVTGLDRSRPMLAIARARLPHIRFFR
                     QDMTSFHIDCRFDAIVCAFDSINHLQRCSDWKNTFRCVARHLNARGVFVFDVNTTGKL
                     QRLVDSAPWVKQFGRDLVLIKVNGGRGGVFAWDVKIFEHRRRDDYKLIGETIEETAFP
                     MQRILTSLQAYFTEIKVFDPEGARPS"
BASE COUNT          488 a          585 c          592 g          459 t
ORIGIN      
        1 ccgtgcggcc gctttgggtc gcggtgcaaa acgatatcat cgccggctgg cttagctttc
       61 aatcgttcta tggccgccct gcctatcatg cgaccgctga gttgagcgtt tacatcgctc
      121 aaagctggca gcgcaaaggc atcggcaacg cgctgctctc tcaagcggtc gtgcaggcgc
      181 cggacttggg cttgaaaaac ctcctcggtt tcatcttcgc gcacaacgac ccgagtctgc
      241 ggctgttcaa gaagttcggc tttgaacgtt ggggaaattt gccgcgcgtc gccgagctgg
      301 acggcatgga gcgcgatctg ataattgttg ggcggcatgt cgttccaaag cttggaccgg
      361 gaattgatgg tgcgtgagaa gtcttacatt ctcgcgatcc cgatcttatg aaaaaaacca
      421 cccgcgtaat cgaattcgag tcgaaacaac ggattcttga gaaagctcag aattatgttg
      481 catccgtcga cctgttcgtt gacgagcgcg atcaggcgat tcctctgctc ttaagagccc
      541 tcaagcacgc cgaccgggag cttaaaagag aaatactatt cgtgcttggc acctttgcca
      601 atgaacaatg cattgggccg ttgtatgaaa tcatgaccga cagcgcggaa gacgaagaaa
      661 ttcgccagca cgccgcgatt cagataagcg tcatgggtcc gttgttgaaa gatgctcaat
      721 cgctgatcga caagctcctc aacgacatgg caagcgcgga tcgcgatctg agactccacg
      781 caaccttcgc gttgggatgg aagggaaacg ttgaggcggg gattcccctg atcgagcggc
      841 tctatgacag cgacgagcaa gttcggcaaa cggcggtgaa tgcgctgtgc aatctcaggg
      901 acgaccgcat cctgccgctt ctgctggaac ggctggagca cggtggttcg gaacaaaagc
      961 acgccattct gctcaacctc tggcgcttcg ctgcgaaacg gcaggacgtc atcaaggtct
     1021 atctgaaatg cttggaacat gatgaacccg ccatgcgctt cgatgcgctc gcttgtttca
     1081 gcctgttggc cgagacgcga gaccacatcg aagtttaccg aaagcttctt aaggatacgg
     1141 acccgaggat tcgcggcttg gcgattaaaa gattagccga ggatgcagcg caggccgcgg
     1201 tgcaaggatt tccaagggag atagaagttc tgctggatga ccgggacatg aaagtcaaaa
     1261 aagctgccct gaagattctc gcacagcgca agtaacggtc gcgcaccttc tgagtccggc
     1321 agtgcgccag cgtcaactat ttttgccgcg ccgcgcttga attcaccatc gacgaaaaac
     1381 ctttcggatc gtggaaaaga ttccatcttg acgcgaacac gctgtgctca aagtaagacg
     1441 gtaacggatg acaccctacg ctagattctc aaggttctac gaccaggtca tgggcgatcg
     1501 agcggatgcg gcgaacttca ttcacgatct catcgagcat caccatccgc gcgcgcagac
     1561 gctgttggaa atcgcttgcg gcaccggcgg catattgggc cgcctgtccg aatcctacga
     1621 tgtcaccggc ctcgatcgct ctcggcccat gcttgcgatc gcgcgcgcga ggctgccgca
     1681 tatccgcttt ttccgacagg acatgacgag ttttcacatc gactgccggt tcgacgccat
     1741 cgtctgcgcc ttcgactcca tcaatcacct gcagcgctgc tccgactgga aaaatacctt
     1801 tcgttgcgtc gcccgacatc tcaatgcccg cggagttttt gtttttgacg tgaataccac
     1861 gggcaagctg caacgcctcg tcgatagtgc gccatgggtt aaacagttcg gccgggacct
     1921 agtgctcatc aaagtgaacg gcgggcgcgg aggagtattc gcatgggacg tgaaaatctt
     1981 tgagcatcga agacgcgatg actataaact gatcggcgag accatcgaag agaccgcgtt
     2041 tccgatgcag cgtattttga cttccttgca agcctatttc accgaaatca aagtgttcga
     2101 ccccgaaggc gcgcggccat cgga
//
LOCUS       DATDAJ010000197         2598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1136122, whole genome shotgun sequence.
ACCESSION   DATDAJ010000197 DATDAJ010000000
VERSION     DATDAJ010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1136122"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VIS53_04865"
     CDS             <1..196
                     /locus_tag="VIS53_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767146.1"
                     /translation="TALMNGAANWRDAAKALNVRYIFWGQDEKTNYQSSSHPWEATAF
                     LVASGDWGAIYDLSKPAPQH"
     gene            complement(225..992)
                     /locus_tag="VIS53_04870"
     CDS             complement(225..992)
                     /locus_tag="VIS53_04870"
                     /inference="COORDINATES: protein motif:HMM:NF024660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEY5767147.1"
                     /translation="MSTQPSHKATARQASTSEDEEWIKIDLHIHTLDDPKDAVDFSAH
                     QLLERARSLGFRVLAITLHDAVFDRKEVFADAAAMGILLMPAAEMRLLGADVIVLNVT
                     AEEIARVKNFDDLRRLRARRGHSIFTIAPHPFYVVGGSIGSRLFAEMDCFDAIEFCHF
                     HIGPFNPNRRAQRVATRFGKPMIATSDAHRLHAFGRHYTSMPMPRALTIENVLAGLRS
                     GPLHLTSPSSSFRDFLSAMYFVFLAHPFRVRRKMAAP"
     gene            1151..1232
                     /locus_tag="VIS53_04875"
     tRNA            1151..1232
                     /locus_tag="VIS53_04875"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1185..1187,aa:Leu,seq:gag)
     gene            1315..2331
                     /gene="floA"
                     /locus_tag="VIS53_04880"
     CDS             1315..2331
                     /gene="floA"
                     /locus_tag="VIS53_04880"
                     /inference="COORDINATES: protein motif:HMM:NF010186.0"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEY5767148.1"
                     /translation="MESLYLIGIAVLALFAFVLAIVLFNFFGLWLRARIANAPVSLGK
                     MIGMRLRKVPVGSIVDNRITAVKAGLDVHSDPLEAHYLAGGDVGHVVLALIAADKAGI
                     TLDFNRACAIDLATKGTGKTVLEAVRTSINPKVIDAPSPNMGRTTIDGVAQDGIGVKV
                     KARVTVRSHLDRFVGGATEETIIARVGEGIVSAIGSAHSYKEVLENPDRISKTVLAKG
                     LDSNTAFEILSIDIADVDVGDNIGAKLQTEQAEADKRVAQAKAEVRRAAAVAVEQEMR
                     ARTQEMRAKVVEAEAQVPMAMAEAFRAGHLGIMDYYRMKNVQADTSMRESIAGGDKPR
                     GDAS"
BASE COUNT          603 a          699 c          742 g          554 t
ORIGIN      
        1 aacagctttg atgaacggcg cggcaaactg gcgtgacgcc gcgaaagcat taaatgtgcg
       61 ctatatcttt tggggccagg acgaaaaaac aaactaccag tcaagcagcc acccctggga
      121 agcgacggca ttcctcgtcg cctcgggtga ttggggcgca atctacgatc tctccaagcc
      181 ggctcctcag cactgaggcg cgaacgtttc tgtacacgcg cggctcatgg agcagccatt
      241 tttcgccgca cacgaaacgg atgcgcgagg aaaacgaaat acatcgcgct cagaaaatct
      301 ctgaagctcg aagaaggact tgttaggtgc agcgggccgc tgcgcaatcc cgcaagaacg
      361 ttctcgatcg tgagcgcacg cggcattggc atactggtgt agtgccggcc aaacgcgtgc
      421 agtcgatgcg catcggaagt cgcgatcatt ggcttgccaa accgggttgc gactcgttgt
      481 gcccggcgat tcggattgaa cgggccaatg tgaaaatgac aaaactcaat cgcgtcaaaa
      541 caatccatct ctgcgaacaa tcgcgatccg attgagccgc cgacaacgta gaacgggtgc
      601 ggcgcgatag tgaaaataga atgcccgcgg cgcgcccgga gccgccgcag atcatcgaaa
      661 tttttcaccc gcgcgatctc ttccgcggtg acattcagca caatcacatc tgcgccaagc
      721 aaacgcatct cggccgcggg catcagcaaa atgcccattg ccgccgcgtc ggcgaacact
      781 tcttttctat cgaagacagc atcgtgcagg gtgatcgcga ggacgcggaa tccaagcgag
      841 cgcgcccgtt ccaataattg atgcgccgaa aaatccacgg cgtctttggg atcatcgagg
      901 gtgtgaatgt gcagatcgat tttgatccat tcttcgtcct cgctcgtact cgcctgccgc
      961 gccgtagctt tatgcgaagg ctgggtgctc atgctcctac tcgaagttta atcgcgaatc
     1021 gctcatactt cattctgcaa agaattctgt ttatctcgag ccctcgatta caagcatgag
     1081 cacgagtaag aaggatgcac tcgacacttg ccagcggttg ccgtctgcgg aaagtttgct
     1141 ccctctcgac gctcgggtgg tggaactggt agacacgtac gtttgagggg cgtatgccga
     1201 aaggcttgcg ggttcgagtc ccgccccgag cacgatctcc tgcggcgccc gttttgatgc
     1261 gcggagaatt agaacttttc gtgtcgtgtc tcctccgata ggatttcgaa caacatggaa
     1321 tcgctttatc tcatcggaat cgcggtactg gcgttattcg catttgtgct cgcgattgtt
     1381 cttttcaatt tcttcggcct ctggctgcgc gcacggatcg cgaatgcgcc ggtgagcctc
     1441 ggcaaaatga tagggatgcg gctgcgcaaa gtccccgttg gatcaattgt tgataatcgg
     1501 attacagccg tgaaagccgg actcgacgtc cacagcgatc cactggaggc gcattatctg
     1561 gcgggtggtg acgtgggcca cgtggtcctt gccttgatcg ccgcggacaa ggctggcatt
     1621 acgctcgact tcaatcgggc atgcgccatt gatcttgcca ccaaaggaac aggcaaaacg
     1681 gttctggagg cggtgcgcac gagcatcaat cccaaagtca ttgacgcgcc tagcccaaac
     1741 atggggcgaa caacgatcga tggcgtcgcg caggatggca tcggcgtaaa ggtcaaagcg
     1801 cgagtcacgg tgcgctcgca tcttgatcga ttcgtgggtg gcgcaaccga ggagacgatt
     1861 atcgcgcgcg tcggcgaagg cattgtgagc gcgattggtt cggcgcattc ctacaaggaa
     1921 gtgttggaaa atcccgatcg catctcgaag acggttctcg ccaaaggcct cgatagcaat
     1981 accgcgttcg agattctctc gatcgacatc gctgacgttg acgtgggcga caacatcggc
     2041 gcaaaattgc agaccgaaca agccgaggca gacaagcggg tagcgcaagc gaaagcggag
     2101 gtgcgcagag cagcagcggt tgctgttgag caggagatgc gcgctagaac gcaggaaatg
     2161 cgggccaagg tagtcgaagc ggaggcgcag gtgccgatgg ctatggccga agcatttcgc
     2221 gcggggcatc ttggaataat ggattattac cggatgaaaa atgtccaagc cgatacttcc
     2281 atgcgcgaat ccattgctgg cggggacaaa ccacgtggtg acgcaagctg atgcgttcaa
     2341 gcgttaaagc gttgaagcgt ttctgtcatt ctgagcgaag cgaagctgca acgcaacgga
     2401 cgaagtccac gagtccaggg tttcaatctc tggttaattc tcagcgctgg tctgctacaa
     2461 acaatagtca gagatgtttc cctccgctca acgtgacaac tgcagtcttg cccccttcga
     2521 cgatgtaact atttaacaat ttaacgccgg caaagcgatg attgccttta gtctcgataa
     2581 tcttcttttc cttctgct
//
LOCUS       DATDAJ010000198         5363 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1139427, whole genome shotgun sequence.
ACCESSION   DATDAJ010000198 DATDAJ010000000
VERSION     DATDAJ010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5363
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1139427"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VIS53_04885"
     CDS             complement(<1..570)
                     /locus_tag="VIS53_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767149.1"
                     /translation="MLRLDSSRTVCFIALVSTLFVVRNTECATAPEPGDLRGVGKVTF
                     PITCAADVQSDFARGVALLHSFFYEEARRVFTSVAERDPKCAMAQWGIAMTWWHPIWT
                     PPTPDEMRAGKAAIQKAMSMNAGSDRERGFITALNTYYNTSDGSAAPVGQSCHGPVGP
                     RDRVVAYEKAMQQLRDKYPDDFEVQTFYAF"
     gene            complement(889..1881)
                     /locus_tag="VIS53_04890"
     CDS             complement(889..1881)
                     /locus_tag="VIS53_04890"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-enoyl thioester reductase domain-containing
                     protein"
                     /protein_id="HEY5767150.1"
                     /translation="MSKSISAAVYETHGNPADVLRVETRPWPTPAADEAVVKMHAAPI
                     NPADLNQIEGKYPVRAKLPATPGFEGAGIVSELGADVKGLTIGALVILPHNVGTWRDA
                     VAVTAEELVIVPDGIEPVQAAMLKINPLTAWRLLHDYVDLQKGDWLIQNAANSAAGCD
                     VIQIAHELGYKTVNVVRRAELIDELLAEGGDVVLVDGGNLREEVKTATGGASICLGLN
                     SVGGDSALRLANCLAPGGTLVSFGAMSLQPLKIPTGLFIFKDLRFRGIWINKWYDNAT
                     PSERMETFGPLFDMARRGLLKTKIEKAYPLSEVKAAVAHAAQGKRNGKIVFEFA"
     gene            1884..2780
                     /locus_tag="VIS53_04895"
     CDS             1884..2780
                     /locus_tag="VIS53_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY5767151.1"
                     /translation="MPAEAHASKKILQTAARVALLGLLINVVLASVKIVAGVIGHAYV
                     LIADGIESALDIGGSIVIWGGLTVAARPPDERHPYGHGKAEPIAAIVVALGVLAAATG
                     LAIESVREILTPHHGPAPFTLAILIVVIVVKEILFRYVNRLGRQTESTAVKTDAWHHR
                     SDALTSIAAFGGISAALLGGEAWYSADDWAALFACAVIGANGIRLLLPAFHEIMDTAP
                     GGKIVRSIRVVASSVPGVVEVEKCHARKMGLDYYVDLHVGVDGNISVHEGHEIAHRVK
                     SAIQQSDSRIADVLVHIEPAQL"
     gene            complement(2838..3554)
                     /locus_tag="VIS53_04900"
     CDS             complement(2838..3554)
                     /locus_tag="VIS53_04900"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767152.1"
                     /translation="MTRIAVTFALPAESSDFLRRLGNKSRANRNEVSIVRGTIGHRSI
                     EVIHTGVGENICTERIEKFLENQQFDFLISAGFAGSLNHEVQVNDLLVAKNFSTVDLK
                     HASLTNVSIYAANLLTVPALIDSSEERERMARESGASAVDMETEFIARACADHGIPLL
                     SLRVITDTPTQSFPAPPSVLFDIQRQRTRLAVLAGFFLAHPRRMPGLFQFAMRIARAR
                     KILASALNAVVQGIDEGRGH"
     gene            complement(3666..4352)
                     /locus_tag="VIS53_04905"
     CDS             complement(3666..4352)
                     /locus_tag="VIS53_04905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767153.1"
                     /translation="MNPDKLFDYLEGRLSPKERAALEQRLMSDKQLQREFAVARQIHA
                     GMRGDSQEVVLPAPPDVSEQGGKMAIRIGVAFMVLMLVNVGIGLWFIFRHESKNPNRP
                     LLEAQMREQIAKSIERAAPLTPAPNALGVTEITIPAETGKLDAVADKVVAIVSELGGS
                     ATKGVPDAGRLSILVDLSANRESEFRAEIASITEVRPGSSAFAEATADKPTPATGEKR
                     SFVVQIAEKQ"
     gene            4599..>5363
                     /locus_tag="VIS53_04910"
     CDS             4599..>5363
                     /locus_tag="VIS53_04910"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767154.1"
                     /translation="MISLIRTFTLLAVIVGGVVPRIDAQVNVTQEHNNLSRDGLYIDA
                     AFTPEAAAGLTRDLNFDGTISGNVYAQPLYIEGGPSGPMIIAVTESNNVYALNPTTGT
                     VIWQRNLGPPVTSGLPCGNINPLGITGTPVVDLVSRSLFFDAVIDGATKKHFIYSLNV
                     DTGATNAGWPVDVDATATYNGTSFTSLVQNERGRLALVNGRVYVSYSGHAGDCGVYRG
                     WVVGVDINNPSNVMAWATTAIGGGIWGHGGVASDGTN"
BASE COUNT         1127 a         1531 c         1470 g         1235 t
ORIGIN      
        1 gaaggcgtag aaggtctgca cttcgaaatc gtccggatat ttgtcgcgca gttgctgcat
       61 tgctttctcg taggcgacta cccgatcgcg cggtccgacc ggaccgtggc acgattgtcc
      121 aaccggagct gcggaaccat cggacgtatt atagtaggtg tttagcgcgg tgatgaagcc
      181 gcgttcgcga tccgagccgg cattcatcga catcgccttt tgaatggcag ctttgcctgc
      241 gcgcatttcg tcgggagtag gcggcgtcca gatcggatgc caccacgtca tggcgattcc
      301 ccattgggcc attgcgcatt tcggatcgcg ttcggccacc gaagtaaaaa cgcgtcgcgc
      361 ctcttcgtaa aaaaacgagt ggagcaacgc cacgccacga gcgaaatccg attggacgtc
      421 agccgcgcag gttatcggga acgtcacttt tccgaccccg cgcaaatcac ccggttcggg
      481 agcggtcgcg cattcggtgt tgcgcacgac aaacaaagta ctaacgagcg cgatgaaaca
      541 aaccgtgcga gacgaatcca atcgcagcat tttttagggt atgtgcgtat gcgtgttccg
      601 caattgcaaa accaagttcg gcttacaaac gcgggtgtct gtttagcgcc aaaggcgcgg
      661 aatcatctca gcctggggca tcgccccagg aattgaatcg catacaacca agcgctgaaa
      721 gcgcgattca atcctcatct gggacatgat cttgcagtga atcgcgcctt cagcgctggt
      781 cattttcgta ttcccacaat cctgaggcgc tgccccaggc ttttaatgaa cgctgcgccg
      841 ttggcgcgct aaaaaacttc agagccgtaa tgccccagct ttacaagttt acgcaaattc
      901 aaaaacgatt ttgccgttgc gtttgccttg cgcggcatgc gcaaccgcgg ctttgacttc
      961 gcttagtgga taagcttttt cgatttttgt tttgagcaga ccgcgcctgg ccatatcgaa
     1021 aagcggtcca aacgtttcca tgcgctcgga cggagtggcg ttgtcgtacc atttgttgat
     1081 ccagatgccg cgaaaccgca ggtctttgaa aatgaaaaga ccggttggaa ttttcagcgg
     1141 ctgcaagctc atcgcgccaa agctcaccag cgtgccgcca ggagcgagac aattagccag
     1201 acgcagtgcg ctgtcgccac cgacggaatt taggccgaga caaatggagg cgccgcccgt
     1261 ggcggtcttt acttcttcgc gaaggttgcc gccatcgacc aacacgacgt cgccgccttc
     1321 tgcgagcaat tcatcaatta attccgcgcg tcgaacaacg ttcacggttt tgtaaccgag
     1381 ctcgtgcgcg atttgaatca cgtcgcaacc agccgccgag ttggccgcgt tttgaatcag
     1441 ccaatcgcct ttttgcaaat ccacataatc atgcagcaat cgccacgcgg tcaacggatt
     1501 gatctttaac attgccgcct gaacaggctc gattccatcg ggcacaatga ccagctcttc
     1561 ggctgtcacc gcgactgcat cccgccatgt gcccacgtta tgcggcagga tcacgagcgc
     1621 tccgatcgtt aggcctttca cgtctgctcc taattcacta acgatgcccg caccttcgaa
     1681 ccccggcgtc gccgggagct ttgcgcggac gggatatttt ccttcgatct gattcaagtc
     1741 cgccggattg atcggagccg cgtgcatctt caccaccgct tcgtctgctg ctggcgtcgg
     1801 ccacgggcgc gtctcaactc gcaaaacgtc agcgggattt ccgtgcgttt cgtaaaccgc
     1861 agcgctaata cttttgctca tcaatgccag cggaagctca tgcctctaag aagattctgc
     1921 aaaccgccgc gcgtgttgcg ctgcttggtc tgttgatcaa tgtcgtgctt gcctcggtca
     1981 aaattgtggc cggcgttatc gggcacgctt acgtgctgat cgctgatggc atcgaatctg
     2041 cactggacat aggcggctcg atcgtcattt ggggcggatt aacggtggcg gcgagacctc
     2101 cggatgaaag gcatccgtac ggtcatggca aagccgaacc aatcgctgcc atcgtcgttg
     2161 cactaggcgt gctcgcagcc gcgactggtc tcgccatcga aagcgttcgc gaaattctga
     2221 cgccccatca cggacctgca ccgttcacgc tcgctattct cattgtggtt atcgtcgtta
     2281 aagaaatcct ctttcggtac gtcaatcgcc tcggccgaca gaccgagagc accgcggtca
     2341 aaacggatgc gtggcatcac cgcagtgatg cgctgacttc tatcgctgcg ttcgggggga
     2401 tctcagcggc acttctcggc ggcgaagcct ggtatagcgc ggatgactgg gcggcattat
     2461 tcgcttgcgc ggttatcggc gcaaatggga tcaggctttt actcccggcg ttccatgaga
     2521 tcatggacac cgcgcctggt ggaaaaattg tcaggtctat tcgcgttgtc gccagttcag
     2581 tacccggcgt tgttgaggtg gagaaatgcc atgcccgtaa gatgggcttg gattattacg
     2641 tcgatctaca cgtcggcgtg gacggcaaca tttctgtgca cgaaggtcac gagatcgcac
     2701 accgagtgaa gagcgcgatt cagcaaagcg attcccgcat cgccgacgtt ctggtgcaca
     2761 tcgaaccggc acaactgtag ctgcaatcgg ggaagtcttg gtatgggcgg ttcactcgaa
     2821 cgccttggcc attgaggtca atggccgcga ccttcgtcaa tgccttgcac aacggcgttc
     2881 agcgcgctcg cgagaatttt tcgtgcacgc gcaattctca tcgcgaattg aaacagaccc
     2941 ggcatgcgtc gcggatgggc gaggaaaaat ccggcgagta cagcgagacg agttcgctgc
     3001 cgttggatat caaacaagac gctcggtgga gcagggaatg attgggttgg cgtgtctgta
     3061 atgacgcgca gcgacagcaa cggaatgccg tgatccgcgc atgcgcgcgc aatgaattct
     3121 gtttccatgt cgaccgcgga ggctcccgat tcgcgcgcca ttctctctcg ttcctcgctg
     3181 gaatcgatca acgcaggcac cgtcaacagg ttggccgcat aaatcgacac gtttgtaagc
     3241 gacgcgtgtt ttagatccac tgtcgaaaaa ttcttcgcga ccaaaagatc gttcacctgc
     3301 acctcatggt tgagtgaccc tgcaaagcca gcgctgatca aaaaatcgaa ctgctgattt
     3361 tcgagaaact tttcaatgcg ctccgtgcag atgttttcac cgacccccgt gtgaatgact
     3421 tcgattgaac gatggccgat cgtgccccga acgatgctga cctcattcct gttcgcgcga
     3481 gatttattgc cgagccggcg caggaaatcc gagctctcag ccggcaaggc gaacgtcacc
     3541 gcaattcttg tcatgttgag caaagcgaaa catctctgat tacttcactt cgcaagtcga
     3601 gataatctga gattcttcgc ttcgctcaga atgacagact ggcggacgaa accgtcaatc
     3661 cgatttcact gcttttccgc gatctgcaca acgaagctcc tcttctcgcc tgtagccggg
     3721 gtcggcttgt ccgccgtagc ctcggcaaag gcggatgagc ccggtcttac ctcggtaatg
     3781 gacgcgatct cagcgcgaaa ttcagattcc cgatttgctg atagatcgac aagaatgcta
     3841 aggcggccag cgtctggaac acctttcgta gcagatcctc caagctcgga aacaattgca
     3901 accactttat ctgcgacagc atcgagtttc ccggtttcgg ctgggattgt gatttcggtt
     3961 acgcccaaag catttggcgc cggcgtgagc ggcgctgcac gctcgatcga tttcgcgatc
     4021 tgctcccgca tctgcgcctc aagcagcggg cggttcggat ttttgctttc gtgtctgaag
     4081 atgaaccaga gaccgatgcc gacgtttaca agcatgagaa ccatgaacgc aacgcctatg
     4141 cggatcgcca ttttgccgcc ctgctctgaa acgtcgggtg gcgctggcaa tacaacctcc
     4201 tgagaatcgc cgcgcattcc ggcatgaatc tgtcgcgcca ccgcgaattc gcgttgcaat
     4261 tgtttgtccg acatcaatcg ctgctccaaa gcggcacgtt ctttcggtga taatcgacct
     4321 tcgagataat caaaaagctt gtcagggttc atcacttcgc aaattgtagg gcgtttctgt
     4381 gaaacgccgg ctttacgctt agcgtctgac ccacacgccc tacaagtatc ggcggaagcg
     4441 tcacgccaga gctctttgcg cgcaattgct aagtggcaag tcgtgccaga ctacgatcgg
     4501 atctgcttgc cgttgctgca cattcggttg cggcaatcct tgacagacgg gccggcgcgt
     4561 tgtggtagaa ggtactgcgg ggtgatcatt gcgtgcatat gatatctttg attcgcactt
     4621 tcacacttct cgccgtgatc gtggggggtg tggttccgag aatcgacgcg caggtcaatg
     4681 tgacccagga gcacaacaat ctttcccgcg acgggctgta catcgacgcg gcctttacgc
     4741 ctgaagctgc cgctggcctg acacgcgacc tcaactttga tggcacaatt tccggcaatg
     4801 tgtatgcgca accgctttac atcgagggcg gtcccagtgg gccgatgatt atcgccgtca
     4861 cagaatcaaa taacgtttac gcgcttaacc ccacgaccgg cacggtgatt tggcagcgca
     4921 accttggccc gcccgttact tccggtcttc cctgtggaaa catcaatccg ctcggcatca
     4981 ccggcacgcc tgttgtcgat ctcgtctcac gatcactttt cttcgatgcg gtgattgatg
     5041 gcgctaccaa gaagcatttc atttactcgc tcaacgtgga cacgggcgcc accaatgctg
     5101 gctggccggt ggatgtggat gccaccgcca cctacaacgg cacttccttt acttcgctgg
     5161 tgcaaaacga gcgcggcagg ctggctctgg tgaacggccg cgtctatgtg tcatactccg
     5221 gccacgccgg cgattgcggc gtctatcgcg ggtgggttgt gggcgttgac atcaataatc
     5281 cttcgaatgt catggcttgg gcgactacag cgatcggtgg cgggatctgg ggtcacggcg
     5341 gcgttgccag cgacggtact aac
//
LOCUS       DATDAJ010000199         2031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1141931, whole genome shotgun sequence.
ACCESSION   DATDAJ010000199 DATDAJ010000000
VERSION     DATDAJ010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1141931"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..462)
                     /gene="queF"
                     /locus_tag="VIS53_04915"
     CDS             complement(106..462)
                     /gene="queF"
                     /locus_tag="VIS53_04915"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002636888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEY5767155.1"
                     /translation="MATRPSKQFETFVNPRPERDYDIEMECPEFTCVCPRTGQPDFAT
                     IRIHYVPDQLCVELKSLKLYLWSYRDEGAFHEAVINKILDDLVQACQPRKMTVVGDFN
                     IRGGIHTTITASYAQS"
     gene            556..1374
                     /locus_tag="VIS53_04920"
     CDS             556..1374
                     /locus_tag="VIS53_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767156.1"
                     /translation="MIFGRILNVSNLREPRAGEKLSEQEAKAYVDHLYSTLYKYAHEK
                     VYKGAFMTQLREGKLPLPVMRQFFKNWGHFSLEVNALNAVSYYTHLPFFVRNFDLLGP
                     FCAKIADELISPRAPGHVLVLLQTAEKMGLNKKEMLEDPYLPAARAINDFCHKIFIDG
                     SIVELWGLHVFEESLSMWSGQWYTALTTHYGFSRQDAVYFSTHEEADMDTHKLGEDGE
                     EAMGHGAFNRTVLTRALQECVEFRAGYSMEYCALTLVDLHLQMKQAALDNPYHP"
     gene            1563..>2031
                     /locus_tag="VIS53_04925"
     CDS             1563..>2031
                     /locus_tag="VIS53_04925"
                     /inference="COORDINATES: protein motif:HMM:NF013426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEY5767157.1"
                     /translation="MTDSELDPLRSILAELAPQGRTVLLPALHAAQQFHGWIPEAVAT
                     EVGRILGVPLADVHGVIDFYEMLSREPLGRTVARVCNAPICALAGSDELANALCRHLK
                     VAPGEVSSNGEFTVEHAPCLGLCDHAPALLVGEIALGHGDPGRAAEICAPGEKR"
BASE COUNT          456 a          566 c          570 g          439 t
ORIGIN      
        1 cgcttccaca agcggagcaa cagcttttgc acagcttatg cacatggacg cggcgcgcga
       61 tcttccgcgc caacgggtgc acgctgcctt caagacgaag gaaactcagg attgcgcgta
      121 gctcgccgtg atcgtcgtat gaatgccgcc gcgaatattg aaatcgccga ccacggtcat
      181 tttgcgcggt tggcaggctt gaacgagatc gtcgagaatc ttgttgatca cggcttcgtg
      241 gaaagcgcct tcgtcgcgat aggaccacaa atagagcttc aacgatttga gctcgacgca
      301 aagttgatcg ggaacgtaat ggattcggat cgtggcaaaa tccggctgtc ccgtgcgcgg
      361 acaaacacag gtgaactcgg gacattccat ttctatgtca tagtcgcgtt ccgggcgcgg
      421 gttgacaaag gtctcgaact gtttactcgg tcgggttgcc accaacgcat cctagcgcgc
      481 cgcaaaacca tttccaaacc ggcgggttaa cttgacttgc caggtgggcg atgataaccg
      541 ctaaaaaaat aggacgtgat ttttgggagg atcctcaacg tgagcaacct aagagaaccc
      601 cgggcgggtg aaaaactcag cgaacaggaa gccaaggctt acgtcgatca tctctattcg
      661 acgctttaca aatacgcgca cgagaaggtt tacaaaggcg cgttcatgac ccaactgcgc
      721 gaaggcaagc tgccgctgcc ggtgatgcgc cagtttttta agaattgggg ccatttctcc
      781 ttagaagtaa acgcgcttaa cgcggtctct tattacacgc acctgccatt tttcgttcgg
      841 aacttcgatc tcttggggcc gttctgcgcg aagatcgccg acgaattgat ctcaccgaga
      901 gcgccgggtc atgttttggt gttgcttcag accgctgaaa agatgggcct caacaaaaaa
      961 gaaatgttgg aggatccgta tctgcccgcg gcccgcgcaa ttaacgattt ttgccacaag
     1021 atttttatcg acggttcgat cgtggagttg tggggactcc atgtattcga agagtcgctc
     1081 tcgatgtggt cgggacaatg gtacaccgcg ctaactactc attacggttt ttccaggcag
     1141 gatgcggtct acttttctac gcacgaagaa gcggacatgg acacgcacaa gctcggcgaa
     1201 gacggcgagg aggcgatggg ccacggcgct tttaaccgca cggtgctcac gcgcgcgctg
     1261 caggaatgcg tcgaatttcg cgccggctat tcgatggaat actgcgctct gacactggtc
     1321 gatctccact tgcagatgaa gcaggccgcg ctcgataatc cgtaccatcc ttgaccaaaa
     1381 acatccgaca acgtcgcacg cgctgtcgag ccgtatcccg ccttcacgtt tattcacttt
     1441 aaacgatggc ttgcagactg ctttcaggta gggcacgatt gccatcgaac gtaatcaacc
     1501 acaagtccgt aacaaaatcc ggcaacgcta ggattgaacc gacaccatgc ctggaacacc
     1561 agatgactga tagcgaactc gatccgctgc gctcgatcct cgccgagttg gcgccgcaag
     1621 gccgcactgt gctcttgccg gccttgcacg ccgcacagca atttcacggc tggattcccg
     1681 aagccgttgc gaccgaggtg ggccgcatct tgggtgtacc cttagccgac gtgcatggcg
     1741 tcatcgattt ctacgagatg ctctcccgcg agccattggg ccgaaccgtg gcgcgtgtgt
     1801 gcaacgcgcc catctgcgcc ctggcgggta gcgatgaatt ggcaaacgcc ctgtgccgcc
     1861 atcttaaagt tgcgccgggg gaagtcagct ccaacggtga gttcaccgtc gagcatgctc
     1921 cctgtttggg tttgtgcgat cacgcgccgg cactcctggt cggcgaaatc gctctgggac
     1981 atggcgatcc cggccgagca gcggagattt gcgcgcccgg tgaaaagaga c
//
LOCUS       DATDAJ010000200         4680 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1145468, whole genome shotgun sequence.
ACCESSION   DATDAJ010000200 DATDAJ010000000
VERSION     DATDAJ010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4680
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1145468"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1452
                     /gene="nrfD"
                     /locus_tag="VIS53_04930"
     CDS             <1..1452
                     /gene="nrfD"
                     /locus_tag="VIS53_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEY5767158.1"
                     /translation="NMDGARATAPEVQEAERRIAHVPLVLNRRNFNWLTQRISGVIEQ
                     PAPRWWWVCFMTTASIATFGLFCIGYQISTGVGTWGNQVPVGWAWDITNFVFWIGIGH
                     AGTLISAILFLLRQKWRTSINRSAEAMTLFAVMCAAIFPGIHVGRFWMAWYMAPIPNN
                     WGIWQNFRSALMWDVFAVSTYFTVSVLFWYTGLVPDLATLRDRATTRIRKFLFGIFAL
                     GWRGSNRHWRHYEMAYLLLAGLSTPLVLSVHSVVSFDFASTLIPTWHTTIFPPYFVAG
                     AIFGGFAMVLTLLLPARAIFKLQDVITPQHIDKMAKIILLTGSFVGYAYAMEFFIAWY
                     SGDHFERYAFWNRVFGPYWWYWWFGMLFCNILSPQLFWFRWCRHNVLVVFFVCMCVNA
                     GMWFERFIIIAGGLVRDFLPSSWRVYHPTWVDIWTYIGTIGIFTSLFLLFIRFLPMIA
                     MSEVKTAIPEADPHYGEAPGPESVSPGGKERTR"
     gene            1580..2137
                     /locus_tag="VIS53_04935"
     CDS             1580..2137
                     /locus_tag="VIS53_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3341 domain-containing protein"
                     /protein_id="HEY5767159.1"
                     /translation="MIKTPYGHKVYAMAAEYPSAAALYEAAKRVRDAGFRRWDVYSPF
                     PIHGMDDAMGLGKSWLSGWVLFGGISGLLTAAIIEFGPSSILYPLTVHGKPRDFFTVP
                     AFFPIMFELTVLFAAFSAFFAWQIMNRLPRWNHPMFNWERFSRVTNDGFFLAIEARDP
                     RFTENGVYELLEQTGGQHITIVHEE"
     gene            2140..2874
                     /locus_tag="VIS53_04940"
     CDS             2140..2874
                     /locus_tag="VIS53_04940"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5767160.1"
                     /translation="MLRAFFVIFVLCTIAMVAVLGFRGQKSTQPPSEIFPDMVRQPKV
                     RAQAPLDFFADGRGPRLPVAGTVPVGYEMPKPKIEGSPPGMAGDAPEEAHMRIAFSAG
                     TDYFNTGKMGDQWGTGIPLPVTRELMERGQQRFNITCSMCHGAAAAGNGITKQYGLAT
                     VVSLQDDRLRKMSDGEIFNTITNGKNTMLAYGPNIVVADRWAIIAYLRALQRSQHATI
                     ADVPEDHRAEMDKPASPPPTTAAPAK"
     gene            2871..4073
                     /locus_tag="VIS53_04945"
     CDS             2871..4073
                     /locus_tag="VIS53_04945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767161.1"
                     /translation="MSERLHTPPMPEGEYFDSRRFTGLSTLLGLIAIVSLVLCLIGAF
                     VSPHQFSYSWLFAFAFFFTLCAGCFFWTIVHHATDANWSVVVRRQLENIAVLLGVLAV
                     LFIPILLLRRHLYAWMDIPPGHEVNLDSKRAYLNFPWFFIRTIIFFGFWIVASQLLRR
                     FSARQDKDGNPLFTIWMRRVSFISLPLFALCLTFGAVDWMMSLNYHWYSTMFGVYIFA
                     GTAGASMALLVLVITALRQAGYLNGIVTLEHYHIMGKWMLAFCVFWAYIGFGQYMLIW
                     YANIPEETQFFLIRNTQSWWALSMLLVVGRFFVPFGILLLRSIKKNPHQLSILAGWIL
                     LMQMLDMYLIVLPALHGTGVHVSIWDLICPVAIGATLSFVYLRLVPRTSLFPVRDPRL
                     IESLTTVN"
     gene            4075..4671
                     /locus_tag="VIS53_04950"
     CDS             4075..4671
                     /locus_tag="VIS53_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767162.1"
                     /translation="MAETQSAHSIAYSRAPFSTWLGVVCLFALFGLIVLAVIGPSTRT
                     SDYEEMRAKKRMEKLKALHEENQKELTTYAWLDKNKGVARIPIDRAMELTVADLAQKK
                     PAPAGPIAMPPAQTAPAGASPAPAASQPPGAAQPAQPSAPAGTSSAAPAASQGAVSSS
                     PAEAAAKAVPPSAIAASPSSATQQSSPAPASPAPATTP"
BASE COUNT          894 a         1323 c         1308 g         1155 t
ORIGIN      
        1 aatatggacg gagcacgagc aacagcaccg gaagtccagg aggcagagcg gcgaattgcg
       61 cacgttccgt tggtcctgaa ccggcgcaat ttcaactggc tcacacagcg catttccggc
      121 gtcatcgaac aacccgcgcc gcggtggtgg tgggtgtgtt tcatgactac tgcgagcatt
      181 gcaacgtttg gccttttttg cattggctat cagatttcca ccggcgtcgg cacatgggga
      241 aatcaggtcc cggtcggctg ggcctgggac atcaccaact tcgttttctg gatcggtatc
      301 ggacacgccg gcacactgat ctcagcgatc ttgtttttgc ttcgccaaaa gtggcgtacg
      361 tcgatcaatc gttccgcaga ggcgatgacg ctttttgcag ttatgtgcgc ggcgattttc
      421 ccaggcatcc acgtcggccg gttctggatg gcgtggtata tggcaccgat acctaacaac
      481 tggggtatct ggcaaaactt tcgcagcgcg ctcatgtggg acgtgttcgc ggtctcgaca
      541 tattttaccg tgtcggtttt gttctggtac actggtttgg ttccggactt ggcgacgtta
      601 cgcgatcgcg cgaccacgcg gatcaggaaa tttctatttg gaattttcgc tcttggctgg
      661 cgcggctcga atcggcactg gcgccattac gaaatggcgt atctgctgtt ggccggtcta
      721 tcaacgccat tggttctctc ggtgcacagc gtcgtatcat tcgacttcgc ctcgaccctt
      781 ataccgacgt ggcacacgac tatttttccg ccttacttcg tcgcaggcgc aatcttcggc
      841 ggctttgcga tggtgctgac gctgctctta cccgcccgcg cgattttcaa gttgcaggac
      901 gtcatcacgc cgcagcacat cgataaaatg gcgaagatca ttttgttgac cggctcattc
      961 gtcggttacg cgtacgcgat ggagttcttc attgcctggt acagcggcga tcatttcgaa
     1021 cgctacgcat tttggaaccg cgttttcggc ccctactggt ggtactggtg gttcgggatg
     1081 ctcttttgca acatactttc gccgcagctg ttttggttcc gctggtgtcg gcataacgtg
     1141 ttagtcgttt tcttcgtctg catgtgcgtt aacgccggta tgtggttcga gcgctttatc
     1201 attatcgcag gcggtttggt ccgcgatttt ctgccatcgt catggagagt ttatcaccct
     1261 acctgggtag acatctggac gtacatcggc acgatcggaa ttttcacttc gctcttcctg
     1321 ctgttcatcc gttttctccc gatgattgca atgtcggaag ttaaaacagc catacccgag
     1381 gcagatccgc attatggcga ggccccggga cccgaatcgg tttccccggg tggaaaggag
     1441 cgcacgcgat gagattgctt agcgctttct gtagccgcgt ctctgtgaga cgcgtgagcc
     1501 gtggattgca aacacgtcag ggatgcgcct cgcgcagcga ggcggctaca gtgtcgtccc
     1561 gtggaaagga gcgcacgcga tgataaagac tccgtatggc cacaaagttt atgccatggc
     1621 agcggagtat ccgagcgccg cggcgcttta cgaagccgca aagcgcgtgc gcgatgctgg
     1681 tttccggcga tgggatgtgt attcgccatt tccgattcac gggatggacg acgccatggg
     1741 actgggcaaa tcgtggctga gcggctgggt tctgtttggc ggaatctcgg gtttgcttac
     1801 cgcggcgatc atcgaatttg gtccgtcatc gatcctctat ccgctcacgg tgcacgggaa
     1861 accaagggat ttcttcaccg ttccagcatt tttcccgatt atgttcgaac tgacggtgct
     1921 gttcgctgca ttttcggcgt tctttgcatg gcaaatcatg aatcgtttgc cgcggtggaa
     1981 ccatccgatg ttcaactggg aacgttttag ccgcgtgacc aatgacgggt ttttcctggc
     2041 aatcgaggct cgcgacccgc gctttacaga aaacggtgtc tacgagctgc tggagcaaac
     2101 cggcgggcag catatcacca tcgtgcacga ggaataaata tgctccgcgc attctttgtg
     2161 atttttgtac tgtgcacgat cgcgatggtc gccgtccttg gctttcgcgg gcagaaaagc
     2221 acacagccac cgtcggagat tttccccgac atggtgcgac aacccaaagt ccgcgcccag
     2281 gcgccgctcg atttttttgc agatggacgc ggtccgcgtt tgccagtagc cggcacggtc
     2341 cccgtcgggt acgaaatgcc gaaaccaaag atcgagggct cgccgcccgg catggcagga
     2401 gacgcgccag aggaagcgca catgcgcatc gccttcagtg cgggaactga ttacttcaac
     2461 accggcaaaa tgggggacca atggggaacc ggaattccgc tgccggtcac gcgcgagttg
     2521 atggagcgtg ggcaacagcg gttcaacatc acttgctcga tgtgccacgg cgccgcagct
     2581 gccggcaatg ggattaccaa gcagtacggg cttgcgaccg tggtctcgct tcaggacgat
     2641 cgccttcgca aaatgtctga cggcgagatt ttcaacacca ttacaaacgg aaaaaacacg
     2701 atgctggctt acgggccgaa catcgtcgtc gcggatcgct gggctattat tgcttacctg
     2761 cgcgcgttgc aacgcagcca gcacgcgacg attgccgatg ttccggaaga tcaccgcgcg
     2821 gaaatggaca aaccggcgtc accgccgccg actacagcgg ctcctgcaaa atgagcgagc
     2881 gtttacatac gccaccgatg ccggaaggcg aatatttcga cagccgtcga tttacagggc
     2941 tttcaactct gctcggtttg attgccattg tgagcctggt gctttgtctc atcggcgcgt
     3001 tcgtgagtcc gcatcaattc agttactcct ggttgtttgc gtttgcattt ttctttacgc
     3061 tctgcgccgg ctgcttcttc tggacgatcg ttcatcacgc caccgacgcc aattggtccg
     3121 tggttgtgcg gcgtcaatta gaaaacatcg ctgtgttgtt aggcgtgctg gcagttcttt
     3181 ttattccgat cctcttgctg cgccgccatc tctatgcgtg gatggacatt ccgccggggc
     3241 atgaggtgaa tctggactcc aagcgcgcgt atctcaattt tccctggttt tttattcgca
     3301 cgattatctt ttttggtttc tggatcgtcg cgtctcaatt gctccggcga ttttccgcgc
     3361 gccaggataa agacggaaac ccgctgttca cgatttggat gcgccgggtc tcgttcatca
     3421 gcctgccgct attcgcgctt tgtctcacgt ttggcgcagt cgattggatg atgagcctca
     3481 actaccactg gtattcaacc atgtttgggg tgtacatctt tgccggaaca gcgggcgcct
     3541 caatggcctt actcgtgctg gtaatcaccg ctttgcgaca ggccggttac ctgaatggca
     3601 tcgtcacgct cgagcactat cacatcatgg ggaagtggat gctcgcgttc tgcgtcttct
     3661 gggcctacat cggttttggt cagtatatgc tgatctggta tgcaaacatc ccggaggaga
     3721 cccaattttt cctgatacga aatacgcaat catggtgggc cctcagcatg cttctggtgg
     3781 tcggccggtt ctttgtaccg ttcgggattt tgctgttgcg ttcgatcaag aaaaatccgc
     3841 accagcttag tatccttgcc ggctggatac tccttatgca aatgctggac atgtatctga
     3901 tcgtgttacc tgcgttacac ggaacaggcg tgcacgtgag catctgggat ttgatttgcc
     3961 cggtcgcgat cggtgccacg ctgagttttg tttatctgcg actggtgccc aggacttcgc
     4021 tgttccctgt ccgggatccg cgtctgattg aatctctcac caccgtcaac tgaaatggcc
     4081 gagacccaat cagctcacag catcgcctat tcgcgcgcgc cattctccac atggctcggt
     4141 gttgtgtgtc tcttcgcctt attcggtctc atcgtgctcg cggtgatcgg accgtcgacg
     4201 cgcacaagtg attacgaaga aatgcgcgca aaaaagcgca tggaaaagtt gaaggcgttg
     4261 cacgaagaaa accagaagga actcacgacg tacgcatggc tcgataagaa caaaggcgtt
     4321 gcccgaatcc cgatcgatcg cgcgatggaa cttacagttg ccgacctggc gcaaaaaaag
     4381 cccgcgcccg ctggtcccat cgctatgccg ccagcacaaa cagcgcccgc cggagcgtcg
     4441 cctgcgcctg ccgcttctca accgccaggc gcggcgcaac cggctcaacc cagtgcgccc
     4501 gccggaacgt cgtcggctgc gcctgctgcg tcacaaggag ccgtctccag ttcgcccgcc
     4561 gaagccgcgg cgaaggcggt tccgccgtct gcaatcgccg cgtcgccttc ttcagcaact
     4621 caacagtcat ccccggcgcc cgcttctccc gcaccagcca ctacgccatg aatcgtcgac
//
LOCUS       DATDAJ010000201         3773 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1155471, whole genome shotgun sequence.
ACCESSION   DATDAJ010000201 DATDAJ010000000
VERSION     DATDAJ010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3773
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1155471"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /locus_tag="VIS53_04955"
     CDS             <1..1305
                     /locus_tag="VIS53_04955"
                     /inference="COORDINATES: protein motif:HMM:NF021436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HEY5767163.1"
                     /translation="PATLPYLSHYASPEFLSAPEDFEGGYFGPMWKHPAEEVAPTIAK
                     IEEIWSRTPNQESSQPPLYYVLAAAWFHIGQWVGVKGGSALYWLRFLNVALMAALVWL
                     AYVAARLIFPDKVGLRLGVPLLIAAVPQDTFYGINNDVLSPICFGLVFICLIKWFSEN
                     KPGNFLGIAAGLSIAAVYLTKLSNLPLIVVAAAAIMWWCITESRAGRLRRAIPALGAL
                     AVCAATPIVTWLLWMKTHFGDFTGATSKAQLLGWTTKPFSDWWSHPIFTALGMWTFVS
                     ELIASFWRGEFMWHAQTIGYKGFDLFYVLSSLGLILIAVSSLVRERAKNVSQSQRRVL
                     WIAVACVIATIVFLAFLSLQFDFGACINPSRERPYFFQGRLMLGALIPFASLYVYGLS
                     RLLRNDRGLVLAAIGAIAITITISDLLANRVAFTSAYNWIHM"
     gene            complement(1255..2445)
                     /locus_tag="VIS53_04960"
     CDS             complement(1255..2445)
                     /locus_tag="VIS53_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767164.1"
                     /translation="MLDSECMMLDDQGVNDEWIVRVEGTEYGPANIETLREWKGEGRL
                     LPSNEARRADVDLWATAAEIPGLFTVPPAVPATGAFTQPPVQLSRRSFAEILTETVQI
                     YRKGFFQFLGLTLLMLLPSVCSQLTTAFVKPSQGTNVDMVSVLAAGFAFVMFILSIVM
                     WPVYIAGIQILTAEIVRGNRFSLVAVLNEAVRFWPRVATLCIFVYGVFFLLMVFGLAI
                     AAMALAAGSSVLLVLVAMALLILQVWMFGRFFVNVLFWQQFAVLEKAGFIDSLRESRD
                     LARSGRDVPWFERPLWRGAFIASIWFAVVLAITLGAQWGTLHQYFNQLLTTQDPQALL
                     QQMTEAQKASGFNIVAFALGIVEKVLQPLVGIAFVVVYLDSKLELPSHVDPIVRTSEG
                     DAVR"
     gene            2455..3369
                     /locus_tag="VIS53_04965"
     CDS             2455..3369
                     /locus_tag="VIS53_04965"
                     /inference="COORDINATES: protein motif:HMM:NF014759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HEY5767165.1"
                     /translation="MRLLLIDGHYYVYRSFFAIPNLSNSRGEPTNAIFGFTKTLRLMV
                     KHLQPELGAVVWDEGLPQKRVELQPAYKETRKEMPKPMVPQLEFIQKQLTPLLGFRNI
                     SLPDTEADDLMGCYAIAACKRTGMDVVLATNDKDLFQLVGPCVKVYTTAKADLASPKD
                     AFALLGEEQVTAKWDVPPGLIGDVLALTGDSVDNIPGIGIGRKSAAALIREFGGLEPL
                     LNNFDKVKSVRTREKLAAARAQILQNRKMVDLDCEMELPVPIDELRIKPDYPALIAAL
                     EKCEFKSLLQEVRDEAAQVGTVVQANLL"
BASE COUNT          862 a         1049 c          992 g          870 t
ORIGIN      
        1 ccggcaacgc ttccctacct gtcgcattac gcatcgcccg agtttctctc ggcgcccgaa
       61 gacttcgagg gcggttactt cggaccgatg tggaagcacc ctgccgaaga agtcgcgccg
      121 acgattgcaa aaatcgaaga aatctggagt cgtacgccta atcaggaatc ctcgcagccg
      181 ccgctttatt atgttttggc tgccgcttgg ttccacatcg gtcagtgggt cggcgtaaaa
      241 ggcggtagcg cgctgtattg gcttcgattt ttgaacgtcg cgttgatggc cgcgctagtt
      301 tggttggcct acgtggccgc gcgattgatc tttcccgaca aagttgggct gcgacttggc
      361 gttccgcttc tgatcgctgc cgtgccgcaa gacacatttt atggaattaa caacgacgtc
      421 ctgtcgccga tttgtttcgg gctggtgttc atctgtttga tcaaatggtt ctccgaaaat
      481 aaaccgggca actttctcgg aatcgcagcc ggcttatcaa tcgccgcggt gtatctgacc
      541 aagctcagta atctgccact gatagttgtc gctgctgccg cgattatgtg gtggtgcatt
      601 acggaaagtc gagcggggag actgcgcaga gcaatccctg cgctcggtgc gctcgcagtt
      661 tgtgccgcaa ctccaatcgt gacgtggctg ctctggatga aaacacattt cggcgatttc
      721 acgggcgcca cctccaaagc gcaattgctt ggctggacaa caaaaccgtt ctctgactgg
      781 tggtcgcatc caatcttcac cgctcttgga atgtggacgt tcgtttccga attaattgcc
      841 agcttctggc gcggcgaatt catgtggcac gcccagacta ttggttacaa aggcttcgat
      901 ttattttacg tcctttcctc cctcggcctg attttgattg ccgtcagttc cctcgtgcgg
      961 gagcgcgcca aaaacgtcag ccaatcgcag cgccgcgttc tttggatcgc agttgcgtgc
     1021 gtcatcgcta cgattgtgtt cctcgcattc ctatcgctgc agttcgattt tggtgcttgc
     1081 attaacccgt ctcgcgaacg gccttacttt tttcagggtc gtttgatgct cggcgcgctg
     1141 attcctttcg cgagccttta cgtttatggg ttaagtcgcc ttctacgaaa tgaccgtggc
     1201 cttgtgcttg cagccattgg cgcgatcgcc attaccatca ctatctcgga cctattagcg
     1261 aaccgcgtcg ccttcactag tgcgtacaat tggatccaca tgtgaaggca gttcaagttt
     1321 gctgtccaga taaacgacca caaaggcaat tcccaccaac ggctggagaa ctttttcgac
     1381 aatgcccaaa gcgaaagcga caatattaaa cccgctggct ttctgcgcct cggtcatttg
     1441 ttgcaacaac gcctgcgggt cctgcgttgt gagcagttga ttgaagtact ggtgcagcgt
     1501 cccccactgc gcaccgaggg taatcgccag cacaacggca aaccagatgg aggcgatgaa
     1561 ggccccgcgc cataatgggc gttcaaacca cggaacatca cgcccgctgc gtgccagatc
     1621 gcgactttca cgcaatgaat cgatgaatcc cgccttctcg agaaccgcga actgctgcca
     1681 aaacagaacg ttcacaaaga aacggccgaa catccaaacc tgcagaatga gcaaagccat
     1741 cgcgacaaga accagcaaca ccgacgaccc agcggcgaga gccatggcgg caatcgccaa
     1801 gccgaacacc ataagtagaa agaacacgcc atagacaaag atgcacagcg tggcgactcg
     1861 cggccaaaat ctgactgctt cattgagcac cgcgaccaga ctgaatcggt ttccgcgcac
     1921 aatttccgcc gtgagaattt ggattcccgc gatgtaaacc ggccacatca caatcgacag
     1981 tataaacatc acaaacgcga agcccgcggc gagaaccgaa accatgtcga cgttggtgcc
     2041 ttgcgacggt ttcacgaatg cagttgttag ctgactgcat accgacggca gcaacatcag
     2101 cagcgtgagg ccgagaaatt gaaaaaaacc ttttcgataa atctgaacag tctcagttaa
     2161 aatttcagca aagctgcggc gtgaaagttg caccggcggt tgcgtgaaag ccccggtggc
     2221 tggcaccgcc ggcggtacag tgaagagccc ggggatttcc gctgccgttg cccaaagatc
     2281 aacgtcggct cgacgcgcct cattggacgg gagcaatcgt ccctcccctt tccactcacg
     2341 gagagtctcg atgttcgccg ggccgtattc cgtgccctcc acacgcacga tccattcgtc
     2401 gttcacccct tgatcatcca gcatcatgca ttcagaatcc agcattagcc cgcaatgaga
     2461 ctgctgctga tcgacggtca ttactacgtc taccggtcgt ttttcgccat cccgaatctc
     2521 tcgaattcgc ggggcgaacc gaccaacgcc attttcggtt ttacaaaaac gctgcggcta
     2581 atggtgaaac atttgcaacc tgaactgggt gccgtcgtct gggatgaagg cctgccgcag
     2641 aagcgagtag agctgcaacc tgcttacaaa gaaacgcgca aagaaatgcc caaaccgatg
     2701 gtcccccagc tggagtttat ccaaaagcag cttaccccgt tgcttggctt ccgaaatatt
     2761 tcccttccgg ataccgaggc tgatgacctg atggggtgtt atgccattgc ggcctgcaag
     2821 cggaccggca tggatgtggt gctggcgacc aacgacaaag atttgtttca actggtgggt
     2881 ccttgcgtaa aagtctatac gacagcgaaa gcagatctcg cgtcgcccaa ggacgccttc
     2941 gcattgctcg gcgaagaaca agttacagcg aaatgggacg tcccgcccgg gctgattggt
     3001 gacgtccttg cgttgaccgg agattcggtg gacaacatcc ccgggatcgg cataggccgc
     3061 aaaagcgccg ccgcattgat tcgggaattc ggtggtctcg aacccttatt gaacaatttc
     3121 gacaaagtga aaagcgtgcg cactcgcgag aaactggccg ctgctcgcgc tcaaatattg
     3181 caaaaccgga aaatggtcga tctggactgt gaaatggaat tgccggtccc gatcgatgag
     3241 ctccgaatca agcccgatta tcccgccctg atagcggctc tggaaaaatg tgagttcaag
     3301 tcgcttcttc aggaggtccg cgacgaagca gcccaagttg ggacggttgt tcaggcaaat
     3361 cttctgtaag caacgagcgt ctttgcggac aatcttcggg ccggacggcg tctgtcgctt
     3421 ggtttacgcc tctgaatagg ggaaatctga ccaagcacga atttttcgta aaaaagttcg
     3481 aacaaacgct gctgcaggct gtcgaatcta acaggttaag gcgattcggg cggttgcacg
     3541 agttcttgta gaagttgttt ctccttagcg tgcgctgccc gaatcatttt tttgccaaaa
     3601 tccggcggcc agtagcgacg ctttgctggc gcgttcgata gacgctgtgg gattttatac
     3661 gtatggtgcg gcctctgctt ctcctccatg gaccctgacg attacgatcc gattgctgca
     3721 gcgcttaaag aagacatagg caaaggagac atcactaccg agtttttcgt tcc
//
LOCUS       DATDAJ010000202         4051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1162992, whole genome shotgun sequence.
ACCESSION   DATDAJ010000202 DATDAJ010000000
VERSION     DATDAJ010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1162992"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..339
                     /gene="rplB"
                     /locus_tag="VIS53_04970"
     CDS             <1..339
                     /gene="rplB"
                     /locus_tag="VIS53_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977816.1"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY5767166.1"
                     /translation="YALVKMPSGEIRRIHGNCFATIGQVGNVDHMNVSSGKAGRTRWR
                     GRRPHVRGMVMNPIDHPMGGGQGKSKGGGGRHHPVSPWGQLAKGFKTRAKHKPSDRFI
                     LERKRAKKKS"
     gene            367..645
                     /gene="rpsS"
                     /locus_tag="VIS53_04975"
     CDS             367..645
                     /gene="rpsS"
                     /locus_tag="VIS53_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEY5767167.1"
                     /translation="MARSLKKGPFVESYLLEKIDKMNASGVKKPIKTWSRRSMVTPDF
                     VGHTFLVHNGKMFHSVFVTENMVGHKLGEFSPTRVFRKHGSHTAKVTK"
     gene            877..1488
                     /locus_tag="VIS53_04980"
     CDS             877..1488
                     /locus_tag="VIS53_04980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767168.1"
                     /translation="MKALTSSLAESNAEAEELRRRYSDLQLRMEALGLASANKDRSKL
                     EQRLLAAVSDLQLAQKTRDEFRDQMLRLNEAILRYIKTSQGDDAQARMDVETQLRSTN
                     ELITKSTNPPEAPEPSLMDGSVISVKEEWSFIVGNLGEKQGVKIGMPMRVMRDDRKIA
                     TLRVVDVRQKICGAVVQELDSKKEEIKVGDRLQVDAQPDVSLR"
     gene            1488..1814
                     /gene="rplV"
                     /locus_tag="VIS53_04985"
                     /pseudo
     CDS             1488..1814
                     /gene="rplV"
                     /locus_tag="VIS53_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
     gene            1987..2679
                     /gene="rpsC"
                     /locus_tag="VIS53_04990"
     CDS             1987..2679
                     /gene="rpsC"
                     /locus_tag="VIS53_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEY5767169.1"
                     /translation="MGQKVNPIGFRLSMNRDWRSRWYASPQEFPTFLHNDLKIRDYVK
                     KKLQFAAVAKIVIERAWNSIRVTIHTARPGIVIGRKGAEIEKMTEEISKMAEGKQVKI
                     DIQEIKTPEIDAQLVAENVALQIERRIAYRRAMKKAVQTAMDFGAEGIKLRSSGRLNG
                     AEISRSEWYREGKIPLHTLRTPIDYGFAEANTVYGKIGVKCWICRKEERPAEPPPAPA
                     APPPPPPEPAEV"
     gene            2691..3116
                     /gene="rplP"
                     /locus_tag="VIS53_04995"
     CDS             2691..3116
                     /gene="rplP"
                     /locus_tag="VIS53_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY5767170.1"
                     /translation="MPLMPKRVKYRKAQRGSRKGTASRNLRIDFGEFGLQTLERAWIT
                     NTQLEAARVALTRNMKRKGKLWIRVFPDKPVSARPPETRMGKGKGQPEFWVATVRPGN
                     ILFELDGIPESVARESLRLAADKLPVRTKFLTRHHVRAA"
     gene            3128..3304
                     /gene="rpmC"
                     /locus_tag="VIS53_05000"
     CDS             3128..3304
                     /gene="rpmC"
                     /locus_tag="VIS53_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEY5767171.1"
                     /translation="MKELSELTVDELLTKRRDQRQESLHLRLQQQSGQLEQPSRLRLL
                     RRDLARIETELSHR"
     gene            3329..3625
                     /gene="rpsQ"
                     /locus_tag="VIS53_05005"
     CDS             3329..3625
                     /gene="rpsQ"
                     /locus_tag="VIS53_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY5767172.1"
                     /translation="MAEQESPSSTSTQAETATRAARKTRTGEVVSSSMNKTIVVRTVT
                     RVPHPKFGKIVKQMKKFYAHDEQNQAKPGDTVRIMETRPMSKLKRWRLVEVVQK"
     gene            3632..3997
                     /gene="rplN"
                     /locus_tag="VIS53_05010"
     CDS             3632..3997
                     /gene="rplN"
                     /locus_tag="VIS53_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY5767173.1"
                     /translation="MVQIRSRLDVADNSGARMATMIGVIGKQTRYAGIGDVITANVKE
                     ASATGTVKKGEVVRAVLVRTTQPIRREDGSLLRFDNNAIVIIDKDLNPRGTRIFGPVA
                     RELRERNFMKIVSLAPEVL"
BASE COUNT         1075 a          984 c         1220 g          772 t
ORIGIN      
        1 tatgcgctgg tgaaaatgcc ttcgggcgaa attcgtcgga ttcacgggaa ctgcttcgcg
       61 accattggcc aggttggcaa tgtcgatcat atgaacgttt cgagcggcaa agcaggacgt
      121 actcgctggc gaggccgacg accgcatgtg cgcggtatgg tgatgaaccc catcgatcac
      181 ccgatgggtg gcggccaggg aaaatcaaaa ggaggcggtg gtcgccatca tccggtcagt
      241 ccatggggac agttggcgaa aggctttaag acgcgggcga agcacaagcc gagtgatcgt
      301 ttcattttgg aaaggaaacg agcgaagaag aagtcgtgac agtaatcgac ttctcacttg
      361 aaatttatgg ctagatcgtt aaagaaagga cccttcgtcg agtcgtatct tcttgaaaag
      421 atcgacaaga tgaacgcgtc gggcgtcaag aaaccgatca agacctggtc gcgacgctcg
      481 atggtgacgc cggactttgt cggccacacg tttttggtgc acaacgggaa aatgtttcat
      541 tccgtttttg tcaccgagaa tatggtgggc cacaaactcg gcgaattttc gccgacacgc
      601 gtgtttagga aacacggttc gcatacggcg aaggtgacga aataattgca gattgaagat
      661 tgtagattgc agattgggag cgcgcggcta cgtcgcgcgg ttgtgcaatt tgcaatttta
      721 aatttgcaat ttgcaattgg gtttagcgcg tacgcgcagg gaaacagttc tttgtcagaa
      781 tccaaaagtg aaaccgtaac gcggccggcg acggcagagc ctgcgctagc ggaaaatgag
      841 gaattgcgaa ggcaattgtc cgttgcccag gaatccgtga aggcattaac cagtagcctg
      901 gctgaatcga atgcggaagc agaagaacta cgccgcaggt attccgatct gcaattgaga
      961 atggaagcgc tgggcctggc atcggctaat aaggacaggt cgaaactgga gcagcgcttg
     1021 ctggcggcgg tgagcgatct tcaactggcg cagaaaacgc gcgacgagtt tcgcgaccag
     1081 atgctccggc taaatgaagc gatcttgcgc tatattaaaa cgtcgcaagg cgacgatgcg
     1141 caggcgcgga tggatgttga aacgcaattg cgcagcacga acgagttgat cacgaagtcg
     1201 acaaatccgc cagaagcgcc cgagccgagt ttgatggatg gcagcgtgat cagcgtgaag
     1261 gaggagtggt cgtttatcgt cggcaacctt ggcgaaaaac agggagttaa gatcggaatg
     1321 ccaatgcgag tgatgcgcga cgatcgaaag attgcgacgc tgcgggtggt agatgtgcgg
     1381 cagaaaatct gcggcgcggt ggttcaggaa ctggattcga aaaaggagga aattaaggtg
     1441 ggagaccgcc tccaggtgga tgcgcaaccc gatgtgagtt tgagataatg gaagtaagat
     1501 cgacatacaa atatgcgcgg atttcgccct tcaaagtgcg cgaagtcacg cgtgagatcc
     1561 agggtctgcc tgtttcggcg gcgctcgatt tgctagcgtt cacaccgaaa aaggcggcgt
     1621 ttctgatcgg caaaacgctg aagagcgcaa tcgccaacgc agagaacaac gcgaacctca
     1681 aacctgacgg tttggtggtg aaggaagcga ccgttggcga aggaccgacg ttgaagcgta
     1741 tcatggcgcg tgctcgcggc agcgccagcc agattttgaa gcgcaccagt cacattcgca
     1801 tcgtgctttc ggacgagatc gagatcgaga cgcgggaaac acgaaaagcg aagcgaaaaa
     1861 cggaaaagag agcggcgaag aaggacggtg cgggcgaagc gacgcaggat gcagcgatcg
     1921 cgccggatca aaagtcagcg aaaccgaagc gggctcggaa gaccaagaaa caatcacact
     1981 aaatttatgg gacaaaaagt taatccaatc ggcttccggc tgagcatgaa tcgcgactgg
     2041 cgctcgcgct ggtacgcttc gccacaggaa ttccccacgt ttttgcacaa tgatctgaag
     2101 attcgcgact acgtgaagaa gaagctgcaa tttgcggcag tcgcgaaaat tgtgatcgag
     2161 cgggcgtgga attccattcg cgtaaccatt cacactgcgc gtcctggaat tgtgatcgga
     2221 cgcaagggcg cggaaatcga gaagatgacg gaagaaattt ccaagatggc cgagggcaaa
     2281 caagtgaaga tcgatattca ggaaatcaag acacctgaga tcgacgcgca gctggttgcc
     2341 gaaaacgtcg cgctgcagat tgaacgccgc atcgcttatc ggcgcgcgat gaagaaagcc
     2401 gtgcaaacag caatggattt tggcgcggaa gggatcaaac tccgtagctc cggtcgactg
     2461 aacggcgctg agatttcgcg ttcggaatgg taccgcgagg gaaaaattcc actgcacacg
     2521 ctgcgcacgc cgattgacta cggttttgct gaggccaaca cggtttacgg caaaatcggc
     2581 gtgaaatgtt ggatctgcag aaaagaagag cgccccgccg aaccgccccc tgcacctgcc
     2641 gctccgccac cgccgccgcc cgagccagct gaagtttagg aggactctct atgccattga
     2701 tgccaaaacg tgtgaagtat cggaaagccc agcgcgggag tcgaaagggg actgcttcgc
     2761 gcaacctgag gatcgatttt ggcgagtttg gtttgcagac actcgaacgc gcttggatca
     2821 ccaacacgca actggaagcc gctcgtgtcg cgctcactcg caacatgaag cgcaaaggaa
     2881 aattgtggat tcgtgttttc ccggataaac ctgtttcggc acggccaccg gaaacgcgaa
     2941 tgggtaaggg taaaggtcag cccgagtttt gggtcgccac cgtgcggccc ggcaacattt
     3001 tgtttgagct ggatggcata ccggaatcgg tcgcgcgtga atctctgcgc ctcgctgccg
     3061 acaaactacc cgtgcgcacg aagtttttaa cacgccatca cgtgagggct gcctaacaac
     3121 catgaaaatg aaagaactca gcgagctgac agtggacgag ttgctgacta agcgacgcga
     3181 ccagcgtcag gaaagtctgc atctgcgtct gcaacagcag agcggtcagc tcgagcagcc
     3241 aagcagactt cgcttactgc gacgcgacct tgccagaatt gagacagagc tatcgcatcg
     3301 ctaaaaaaaa actcaggaga attaaatcat ggccgagcaa gaatctccat catcgacatc
     3361 aacgcaggct gagacggcga ctcgtgccgc gcggaagacg cgcacaggcg aggtggtttc
     3421 cagcagcatg aacaagacga tcgtcgtgcg gacagtcacg cgcgtgccac acccgaagtt
     3481 tggtaagatc gtcaagcaga tgaagaaatt ttatgcgcac gacgaacaga accaggcgaa
     3541 gccgggggac actgttcgca ttatggaaac gcgcccaatg agcaaactga agcggtggcg
     3601 actcgtggaa gtcgttcaga agtaaatttc aatggtgcaa attcgatcca gactggatgt
     3661 ggctgacaac tccggcgctc gcatggcgac gatgatcggt gtaattggta agcaaacgcg
     3721 ctacgccggc atcggcgatg tgatcactgc caatgtgaag gaagccagcg cgaccgggac
     3781 cgttaagaag ggcgaagtgg tccgcgcagt cttggttcgc accacacagc caatccgacg
     3841 cgaggacggt tcgctactgc ggtttgataa caatgccatt gtaattatcg ataaggattt
     3901 gaacccccgc ggcacacgta ttttcgggcc ggtcgcgcgc gaactgcgtg agcgcaactt
     3961 tatgaaaatt gtgtcgctcg cgccggaagt tttatgaacc gcgtcaagca tcacgtcaaa
     4021 aaaggcgatc aggtcgaggt gatttccgga a
//
LOCUS       DATDAJ010000203        11496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1164649, whole genome shotgun sequence.
ACCESSION   DATDAJ010000203 DATDAJ010000000
VERSION     DATDAJ010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 11496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11496
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1164649"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VIS53_05015"
     CDS             complement(<1..622)
                     /locus_tag="VIS53_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767174.1"
                     /translation="MRALVASYQKSWPKIAALLMLLNGCGSGNNRVLEEVSEKVYSVQ
                     PNANISIHNYNGAILVYGSDVNEVRVRSLKKAYSHERLNQIVIDVSAKPGAVSITAKA
                     PPQPKWAFSDHSGTVDCTIVVPASVNISALDLNAGEVFLDSMRGPQVRARLNDGRIIA
                     RNCFTNLDLTVNRGTLALSYEWWQEEKFSAQATMIQGNAWVWLPSEA"
     gene            complement(655..2190)
                     /locus_tag="VIS53_05020"
     CDS             complement(655..2190)
                     /locus_tag="VIS53_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEY5767175.1"
                     /translation="MLAKIYSAAVFGVDAYEVEIEVNGAGGDPVIVIVGLPDAAVKES
                     RDRVTTAISNSGYYWPRGRTTINLAPADIKKEGPSFDLPIALGMIAVTEELNSSPFEN
                     FSFVGELALDGSVRPVKGVLPVALEARRRGKRALFVPEANALEAAMVDKIDIYGVQNL
                     RQTFAFLRGEIALLPTRADLSKFFAAHQNYAVDFSDVKGQGYVKRAIEVAVAGGHNVL
                     MIGPPGSGKSMLAKRIPTIIPPLTLDEAIETTKIHSIAGLLDTEQSFVATRPFRAPHH
                     TISDIGLLGGGTFPNPGEVSIAHNGVLFLDELPEFKRSALEVMRQPLEDGKVTVSRAA
                     GSVTFPSEFMLVAAMNPCPCGYFGDLKRECRCGPVQVQRYRQRISGPLLDRIDLHIEV
                     PAVEYRDVASERAEEMSAAIRDRIMRARERQQERFRNDAKVNCNARMATRQLKQHCKL
                     GQDSQELIRVAMSELNLSARAYDRILKVSRTIADLDGKTDIAPEHVSEAIQYRTFDRT
                     LWV"
     gene            2490..3359
                     /locus_tag="VIS53_05025"
     CDS             2490..3359
                     /locus_tag="VIS53_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD/SigA"
                     /protein_id="HEY5767176.1"
                     /translation="MKKSYMAAEDSDTGIKIYLREIGQIPLLTPEQEIELAAKIKKGD
                     REARALMIRSNLRLVVKIAHDYANLGLPLLDLISEGNIGLMKAVERFDPAKGGKLSTY
                     AAWWIKQSIKRALANQSKTIRLPVHLVDKISKMRRVSLQMSEELGREPTDEELGDEIG
                     IASGKVSQLKTVSIRPASLDAPISDDDSTEFGEIVGDEEAQTPFELLRDKNLRNEVGG
                     LLDVLDDREKKIIFQRFGLDGGKPKTLEEVGKKFGVTRERIRQLQNIALSKLRRALAK
                     KERPVDVELPVEA"
     gene            complement(3540..4055)
                     /locus_tag="VIS53_05030"
     CDS             complement(3540..4055)
                     /locus_tag="VIS53_05030"
                     /inference="COORDINATES: protein motif:HMM:NF025013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4142 domain-containing protein"
                     /protein_id="HEY5767177.1"
                     /translation="MKTKVRIVSQLCILALAVGALSVAGAARAQTTPTGGGSSLSEKD
                     KTFMKKAAKGGMMEVTMGKMAEQNAQSDDVKSFGKRMVTDHGKANDELKSIASKKGVQ
                     LPSKERTGKWTSDKDYMDMMVKDHEKDLAEFKEEASSGSDPDLKKFADDTAKIVQEHL
                     DLAKEIQGKLK"
     gene            complement(4180..5595)
                     /locus_tag="VIS53_05035"
     CDS             complement(4180..5595)
                     /locus_tag="VIS53_05035"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767178.1"
                     /translation="MAVKTEKELSESLRALWLKAVSAIELRNFGYAISLLQEILKQEP
                     EFLTGRQLLRRAAVTKSKSAKKSFFNISTASIGVMKAQRKLKKDPKHAIEMLEEVLEG
                     EPYNRQANLLLKEAAVAAGWSEIGVFALRTLLEENPRDAKVLHELGRLYHDLGDHEHE
                     VEIYNQLTAIDPLDAQSLRLGKDASARASMKEGGWAQAESYRDLIKNKDEAISLEQQS
                     RIRLTGEALDQQIGETYARHQAEPENLDFARRLGALSEQKEDLESAIRWYQYAVDLAK
                     GADTGLLRKISDLKIKCLEHEIAALEEFLSTYSARDEVYAEKSGQLRTAKVSRAEILI
                     ADAQERVKRNPTDLQLRFELGENFFNAGRFREAVPELQRARQNPHARLKAMNVLGCCY
                     GELGMLDLAMKQLEEASQEISSMDAMKKEIVYNLGLIYDQMGDPGKALACMKQIYEVD
                     YGYGDVAHRVESSYERNISGA"
     gene            complement(5684..8239)
                     /gene="mutS"
                     /locus_tag="VIS53_05040"
     CDS             complement(5684..8239)
                     /gene="mutS"
                     /locus_tag="VIS53_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEY5767179.1"
                     /translation="MQDALTPMMQQYQRLRKSIPPDTFLLFRLGDFYEMFFDDAKEAS
                     ALLNVALTKRNDVPMCGVPYHAAQGYIRRLIKAGRRVAICDQMSEPQPGRKIVDREVT
                     QIITAGTVSELSWLDAKRANYLGAIYADGDAFGFAYADLSTGEFRLAQAQDRQSLHDQ
                     IARVSPAELLISSEQKAQTGEIDHALEYDSYAFLPEQAIFTLCEHFKVKSLDGFGCAQ
                     MPAAVAAAGAIVHYLKHQLRRKIDHLTSLRCDAPADHVLLDSATQANLELVESRGARD
                     ASLLSVLDRTITPMGARKLRAWILQPLRDLAELQGRQEMIGQLLQESDLLGSIRTELK
                     SIRDIERAAGRLSQASGNARDLVALKTSLQQIPTLKRELGKLIERIDFGRARPEPARR
                     GGGAPNVAEAGGLGDPALPEHLQNAIREMPLLAERLTNALLDDPPLALKEGGIFRDGY
                     DADLDALRQASRAGKSWISDLQEREVAATGIKSLKVRYNSVFGYFIEITKSNLANVPA
                     RYTRKQTTVGGERFITPELKEMEAKVLGADDRAQNLEYQLFQKFRDETLHEIEPIQET
                     ANAIAVLDVLCALAETARLFRYCRPELNDSLRLVIKDGRHPVLDQNLVDEKFVPNDTE
                     LDGENIRLAIVTGPNMAGKSTYIRQVALIVLMAQIGSFVPAESVDVGLVDRIFTRVGA
                     SDDLARGQSTFMVEMNETANIINNATERSLVILDEIGRGTSTFDGLSIAWSVAEFLYD
                     KIKARSLFATHYHELTKLAEDRKGVCNLNVAVREWNEQIIFLRKIIAGGADKSYGIQV
                     ARLAGLPKEILDRAKEILAHLESSSRAETEPKRRGRKSPKPMPESQKPQLDLL"
     gene            8495..8689
                     /gene="rpsU"
                     /locus_tag="VIS53_05045"
     CDS             8495..8689
                     /gene="rpsU"
                     /locus_tag="VIS53_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEY5767180.1"
                     /translation="MPEVIVRKGEPVDRALKRLKNKLDSEGILEEVRRLRAFETPSQK
                     HRRKARANAKRARMKFRFNS"
     gene            complement(8756..10276)
                     /gene="cobA"
                     /locus_tag="VIS53_05050"
     CDS             complement(8756..10276)
                     /gene="cobA"
                     /locus_tag="VIS53_05050"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEY5767181.1"
                     /translation="MSKSVSKNGKVYLVGAGPGDLGLVTLRAKECIENADVIVYDHLA
                     NPDALGWARDDAEIIYAGKQPGESRTQQEITSLLIDRAREGKQVVRLKGGDPFVFGRG
                     AEEAQEIASAGIPFEIVPGISSAIAGPAYAGIPMTHRGHNSHVTFFTGHEDPTKPESA
                     IDYAALAKLGGTQVMLMGVERLGAVTSEMLKHGVRGDLPVALVRRATTGQQETLTGTL
                     SDIAQKVAAKNFEAPAVAVFGDVVTLRDTLNWYEKRPLLGKRIVVTRTRKQASVLSNK
                     LRALGAHVIELPTIRIEPPSNLREFAELVQDAHVYDWIVFTSANGVDAFFDIFFKLYD
                     DAREIGGARIAAIGPATAQRVKDFHLHVDLQPEEFVAEAVLREFKKQGSVENERILVV
                     RAEKARDVLPKELSAAGAIVDEAFAYRTVPETRHTSGAQRQLSQEGADLITFTSSSTV
                     ENFLALGLPWPKGMRIASIGPITSKTVRDQGLNVDIEARRHDIEGLVRAIRELFAR"
     gene            complement(10281..11201)
                     /gene="hemC"
                     /locus_tag="VIS53_05055"
     CDS             complement(10281..11201)
                     /gene="hemC"
                     /locus_tag="VIS53_05055"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEY5767182.1"
                     /translation="MIAKITLGTRGSELARAQTLLVEKAIRSAHPNVAIETKIIVTRG
                     DNAKVVDLAAGRKGLFTAEIERALLAGEVDVAVHSAKDLPSQTRRGAQIAAVLPRAPT
                     NDVLISKHSGGLASVPYGATVATGSVRRQRQLNWKRADLKVVDLRGNVPTRLRKLAEN
                     EWDGIVLARAGLERLGFSSTGTEIGVDGGQFFLEILPRETFVPAGGQGIIALQIRADD
                     QNTKALLESLNHPETLLCLQAEREFLSRLHGDCNFPVGVHATISNGKMKVCAQVFEGE
                     SPLPRQAEVEGASDVGDQLAAELLRKIEED"
     gene            complement(11250..>11496)
                     /locus_tag="VIS53_05060"
     CDS             complement(11250..>11496)
                     /locus_tag="VIS53_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767183.1"
                     /translation="PRDVDPSVNELQGVYLYDIDSIRSVAEQSLELRRQQVAAAEAII
                     ADHVTEFIDSISRGLNRRSQAPEHSSLGENPLRASEL"
BASE COUNT         2444 a         3255 c         3102 g         2695 t
ORIGIN      
        1 ctgcttcact gggcaaccaa acccaggcat ttccctgaat catggtcgcc tgcgccgaaa
       61 acttttcctc ctgccaccat tcgtaggaca gcgcgagcgt gccgcggttc actgtaaggt
      121 ccaggttggt gaaacagttc cgggcaataa tccggccgtc gtttaatcgt gcacgtactt
      181 gtgggccgcg catcgaatcc aggaaaactt cccccgcatt caaatccagt gcagagatgt
      241 tgactgatgc cgggactaca atggtacaat caaccgtgcc tgaatgatcc gagaaagccc
      301 acttcggttg gggaggagct ttcgctgtga ttgaaacagc ccccggtttt gcggagacat
      361 caatcacgat ctgatttaat cgctcatggc tgtacgcttt tttcagcgat cgtacccgca
      421 cctcgttaac atctgagcca taaaccagga ttgcgccgtt ataattgtga atgcttatgt
      481 tcgcgttggg ttggaccgaa taaacctttt cagaaacctc ttcgagcacg cggttgttcc
      541 cgctgccgca gccgttgagc aacatcagca atgctgcgat cttgggccag gatttttgat
      601 agctagcaac taacgcgcgc acaaaattct aacaggagca gcggcagcag cgaatcatac
      661 ccaaagcgtc cgatcgaatg tgcgatattg gatggcttcg ctgacgtgct ctggcgcgat
      721 atcagtcttg ccgtcgagat cggcgatcgt gcgcgatact ttgagaattc gatcgtaggc
      781 gcgggcgctg aggttcaatt cgctcatggc cacacgaatc aattcctggg agtcctggcc
      841 gagcttgcag tgctgtttca actgacgcgt agccatgcgg gcgttgcaat ttactttggc
      901 atcgttgcga aaccgttcct gctgacgttc ccgggctcgc atgatgcgat cacgaatggc
      961 agcagacatt tcttcagcgc gttcgctcgc cacgtcgcga tattcgacag cagggacttc
     1021 gatgtgcaaa tcgatgcgat cgagcagcgg gccggaaatg cgttgacgat agcgctgcac
     1081 ctgcacaggg ccgcagcggc attcgcgctt tagatcgccg aagtaaccgc acggacaggg
     1141 attcattgcg gccacgagca tgaactcgga gggaaacgtg acacttcccg cagcgcgcga
     1201 cacggtcact ttcccgtcct cgagcggctg acgcatcact tccaacgccg atcgtttaaa
     1261 ctccgggagt tcatccaaaa aaaggacgcc gttgtgcgcg atactaactt caccaggatt
     1321 tggaaatgtg cccccgccaa gcagaccgat gtcgctgata gtgtgatgcg gcgcgcggaa
     1381 aggtcgcgtc gcgacaaacg attgttcggt gtcgagcaaa ccagcaatgc tgtggatttt
     1441 ggtcgtctcg atcgcttcat cgagcgtaag cggcgggata atagtcggga tgcgtttggc
     1501 gagcatcgat ttgcccgaac caggcgggcc gatcataagg acgttgtgac cgccggcgac
     1561 ggctacctcg atcgcgcgct tgacgtaacc ctggcctttc acgtcgctga aatcgacggc
     1621 gtaattttgg tgtgcggcga agaatttgct gagatcagcg cgtgtgggca gaagcgcaat
     1681 ttcgccacgt aaaaaggcga atgtctgccg caaattctgt acgccgtata tgtcgatctt
     1741 gtcgaccatc gcggcttcga gcgcatttgc ttcggggacg aacaacgcgc gtttaccgcg
     1801 gcgtcgcgcc tcgagtgcga ccggcagcac gcctttcacg ggacgaacgg aaccgtcgag
     1861 cgccaattcg ccgacaaagc taaaattctc gaacggcgaa ctgttgagtt cctccgtcac
     1921 cgcgatcatt cccagcgcaa ttggtaggtc gaagctcggc ccctccttct taatgtctgc
     1981 gggcgcgaga tttattgtgg tccgtccgcg cggccagtag tagccgctat ttgaaatcgc
     2041 ggtggtgacc cggtcgcggc tctctttcac cgccgcgtct ggaagtccca caatgacaat
     2101 gacagggtcg ccgccggcgc cgtttacctc gatttccacc tcgtaggcgt ccacgccgaa
     2161 aaccgcggcg gagtaaattt tcgccagcat gtcgcggcag agttgcagaa aattgctgca
     2221 acgaaaagcg ccaaatatcc cttgaaagtg aaatgcaacg aatgccttaa aatattgtca
     2281 aatattcaaa gaatcggtca gacaagcgcg tatttaaggg ccagttaaag ccctacaaaa
     2341 aaatttgaac gataggcatc cacttgatgt cacaaattcg aatatttaac cttgttaact
     2401 acttgctcgg atgctagaac gcgtgatcga taaggcgtcg gcgaatacag tatacgggaa
     2461 gttgtcgagc ctattccccc aaatgaacga tgaaaaagag ttatatggct gctgaagaca
     2521 gcgatacagg aattaagatt tacctgcgcg agattgggca aatcccgctt ttgactccgg
     2581 agcaggaaat cgagctggcc gctaagatca aaaaggggga tcgcgaggcg cgcgcgctga
     2641 tgatccgctc taacttgcgt ttggtggtca agatcgccca cgactatgcc aaccttggtc
     2701 tgccgctgct ggatttgatc tccgaaggca atatcgggct catgaaagcg gtggaacggt
     2761 tcgatccggc aaaaggcggg aaactaagca cttacgccgc atggtggatc aaacagtcga
     2821 tcaagcgagc actggcgaac cagagcaaaa ccatccggtt gcctgtgcac cttgtggata
     2881 aaatctccaa gatgcgtcgc gtttcgctgc agatgagcga agagctcggc cgcgaaccaa
     2941 ccgacgaaga gctcggtgac gagattggca tcgcgagcgg gaaagtttct cagctgaaga
     3001 cggtttcgat ccgaccggct tcactcgacg cgccgatcag cgacgacgat tcgaccgagt
     3061 tcggcgaaat cgtcggcgac gaggaggcgc agacgccgtt tgagctgttg cgtgataaga
     3121 atctccgtaa tgaggtcggc gggctgttgg acgttctgga cgaccgcgaa aagaagatca
     3181 tcttccagcg tttcggactg gacggcggaa aacccaagac gctcgaggaa gtaggcaaga
     3241 aatttggtgt caccagggag cgcattcggc agttgcaaaa tattgcgctc tccaaactgc
     3301 gccgtgcgct cgcgaagaaa gagcggcccg tggacgtgga actgcccgtc gaagcttgat
     3361 gctgtagccg cttccccgtg ggaagcgtga aactgccctg ctaaatgcgc gccaagtgcg
     3421 ccgctcacag agcggcggct acaattattt cagaatgcac agttgaatcg aatcgataat
     3481 gggcgcgtca cgtcgtgacg cttctgtaaa cgtccctcgt cgagctgtca gcgcttcggt
     3541 tatttcagct tgccttggat ttctttcgca aggtcgagat gctcttgaac gatttttgct
     3601 gtatcatccg caaacttctt caaatcggga tcgctcccac tgcttgcttc ctctttgaat
     3661 tcagccaggt ccttttcgtg gtccttgacc atcatgtcca tgtagtcctt gtctgacgtc
     3721 catttgccgg tgcgctcttt gctcggaagt tgcactcctt ttttagaagc aatggatttg
     3781 agttcatcat tggctttgcc gtgatcggtg accattcgtt tgccgaatga ttttacatca
     3841 tcgctttggg cattctgttc agccattttt cccatcgtga cttccatcat cccgcctttc
     3901 gcggctttct tcataaaggt cttgtccttt tcacttaatg aagaaccacc gccagttggc
     3961 gtggtttgcg ctctggccgc tccagccacg ctcagcgccc ccactgccag agcaaggata
     4021 cacaactgcg aaacaattcg gactttggtt ttcatggttt tatttggttg aacgggccgg
     4081 ggacatccca gcttcaatta acaatcgaaa gctcggcgct ggttggacgc gaaagaatta
     4141 cgcttcctgc catctggtat gatggcccgc cctacctcgc tatgccccgg agatattccg
     4201 ttcgtacgag ctttcgacgc ggtgggccac gtcaccgtag ccgtaatcca cttcgtaaat
     4261 ctgcttcata caggcgaggg cttttcccgg atcacccatt tggtcgtaaa ttaggccgag
     4321 gttataaacg atctctttct tcatcgcgtc catcgatgag atttcctggg atgcttcctc
     4381 cagttgcttc atcgccagat cgagcatacc aagctcgcca tagcagcacc ccagcacgtt
     4441 catcgctttc aaacgggcgt gcggattttg tcgcgcgcgc tgcagttccg gcacagcctc
     4501 ccgaaaacgc ccggcattga aaaagttctc gccgagttcg aaccggagct gtagatccgt
     4561 cggattccgt ttcacccgct cttgcgcatc cgcgatgagg atttctgcgc gactaacttt
     4621 ggcggtgcgc agctgcccag acttttccgc atagacttcg tctcgtgcac tgtatgtgga
     4681 gagaaattct tccaacgcag cgatctcgtg ttcgaggcat ttgattttca aatcggaaat
     4741 ctttcgaagc aatcctgtgt ccgcgccctt ggcgagatca acagcatatt gataccagcg
     4801 aatggcagat tcgagatcct ccttttgctc gcttagcgcc ccgagccggc gcgcaaagtc
     4861 caggttttca ggttccgcct gatgacgcgc gtaagtttcc ccgatctgtt gatcgagcgc
     4921 ctcgccagtg agccggatcc gactctgttg ctcgagtgaa atggcttcgt ccttattctt
     4981 tatcagatcg cgataacttt cagcctgcgc ccagccacct tccttcatcg aagcgcgcgc
     5041 cgaagcgtct ttgccgagac gcaacgactg cgcatcgagc ggatcgatcg cggtgagttg
     5101 attgtaaatt tccacctcat gttcgtggtc cccaagatcg tgatacaaac gccccagctc
     5161 atgcagcact ttcgcatcgc gcggattctc ttcgagtaag gtccgcagcg cgaaaacccc
     5221 gatctcagac caacccgccg ccaccgccgc ttccttcaaa agcaaatttg cctggcgatt
     5281 gtaaggttcc ccttctaaga cttcctccag catttcaatc gcgtgcttag ggtccttttt
     5341 gagctttcgt tgtgctttca tcacgccgat ggacgcggtc gagatgttga aaaaactctt
     5401 cttagccgat ttgcttttcg tgaccgccgc acgtcgcagc agttggcgac cggtgagaaa
     5461 ctcgggctcc tgcttgagaa tttcctggag gagcgaaatc gcgtaaccga aattgcgcaa
     5521 ctcaatggcg ctaaccgcct tgagccaaag cgcgcgcagc gattcgctca gttctttctc
     5581 ggttttgacc gccatgcttg ccagcagctt atcacaaaag cagatgcatg cgtcagcccc
     5641 gcgcgagatg gcaactagag ccggtcggcg aaagctctct cgtttataac aggtctagtt
     5701 gcggcttttg cgattccggc atcggcttgg gcgactttct tcctcgccgc tttggttctg
     5761 tctcagcgcg gctggaactt tccaaatggg caagaatttc tttggcgcga tcgaggattt
     5821 ctttaggcaa gccggcgaga cgggccacct gtatgccgta acttttgtcg gcgccgccag
     5881 cgatgatttt gcgcagaaaa atgatctgct cgttccattc gcgcacggcg acattcagat
     5941 tacaaacacc tttgcggtcc tccgcgagct tggtcaactc gtgataatgc gtggcaaaca
     6001 gactgcgcgc tttgatcttg tcgtagagaa actcggccac actccacgcg atagagaggc
     6061 cgtcgaaagt ggatgtgccg cggccgatct cgtcaagaat gactaacgat cgctcggtgg
     6121 cgttgttgat gatgttagcc gtttcgttca tttcgaccat gaaggtcgat tggccgcggg
     6181 ccagatcgtc gctcgcgccc accctggtga aaatgcgatc gactaagccg acatccacgc
     6241 tctccgccgg gacgaagctc ccgatctggg ccatcaacac gatcagcgcg acctggcgga
     6301 tatatgtcga tttaccggcc atattcggcc ccgtcacaat ggccaggcga atattctcgc
     6361 cgtccagctc tgtgtcgtta ggcacaaatt tttcgtcgac aagattttga tccagcaccg
     6421 gatggcgccc gtccttaatc acgagccgga gcgaatcgtt tagctctggc cggcaatagc
     6481 gaaacagtcg ggcggtttca gccaatgcgc agagcacgtc gagtaccgcg atcgcgttcg
     6541 cggtctcctg aattggctcg atctcatgca aggtttcatc gcggaatttc tgaaacaatt
     6601 ggtactcgag attttgggcg cggtcgtccg cgccaagaac ttttgcttcc atctccttta
     6661 actccggcgt gatgaagcgt tcgccgccca cggtggtttg ctttcgcgtg taacgcgcgg
     6721 gcacgttcgc gagattcgat tttgtgattt cgatgaagta accgaaaacg gaattgtaac
     6781 ggactttgag tgatttgatg cccgtagctg cgacctcgcg ttcttgtaaa tcactgatcc
     6841 aacttttgcc cgcgcgcgag gcttggcgca gcgcgtcgag gtccgcatcg taaccgtcac
     6901 gaaaaatgcc gccctctttc agcgcaagcg gcggatcatc cagaagcgcg ttggtcagtc
     6961 tttcagcgag taacggcatt tcgcgaatgg cattctgcag atgttctggt agggcgggat
     7021 cgccgagccc gccagcctcg gcgacattcg gcgcgccccc gccacggcga gcaggctctg
     7081 gtcgtgccct accaaaatca atccgctcaa tcaacttgcc aagctcacgc ttgagcgtgg
     7141 ggatttgctg cagcgaggtt ttcaacgcga cgagatcacg cgcgttccct gaagcctgac
     7201 tcagtcgccc ggcggcgcgc tcgatatccc ggatcgactt taactccgtg cgaatcgatc
     7261 ctagcaggtc cgactcctgc aaaagctggc caatcatttc ctggcgtcct tgcagctcag
     7321 cgagatcacg caatggctgc aagatccacg cgcgcaattt gcgtgcgccc atcggagtga
     7381 tagtgcggtc aagcacactc agcagactcg cgtcgcgcgc gccgcgagat tcgactagct
     7441 caagattggc ttgtgtggcg gagtcgagca ggacgtgatc cgccggcgca tcgcagcgca
     7501 acgaagtgag atggtcgatt ttgcgccgca gttgatgctt taaataatgc acgattgccc
     7561 cggccgcagc gactgccgcc ggcatctgcg cgcacccgaa gccgtcgagc gatttgacct
     7621 tgaaatgttc gcacaaggtg aaaattgcct gttctggcag gaacgcataa ctgtcgtact
     7681 cgagagcgtg atcgatttca ccagtctgcg ctttctgttc cgagctgatc aacaattcgg
     7741 cgggcgaaac acgcgcgatt tgatcgtgca gcgattgtcg atcctgcgcc tgggccagtc
     7801 ggaactcacc ggtgctgaga tcggcgtatg cgaaaccgaa tgcatcgcca tcggcataga
     7861 tcgcgccgag ataattcgcg cgcttcgcat cgagccagct caattcgctg accgttcccg
     7921 cggtgatgat ttgcgtgact tcgcgatcga cgatcttgcg gccaggttgt ggctcactca
     7981 tctgatcgca aatggcgacg cgccttccgg ccttaattaa cctccgaatg tatccctgcg
     8041 cggcatgata cggcacaccg cacatcggca cgtcgttgcg cttggtcagc gccacgttca
     8101 gcagcgccga agcctccttc gcgtcatcga aaaacatctc gtagaaatct ccgagccgaa
     8161 acagaaggaa cgtgtccggc ggaatgcttt tcctcagccg ctggtactgc tgcatcatcg
     8221 gagtgagcgc gtcttgcata tgaagtttac cttcccacct caattgaacg tcaagagatg
     8281 agcggcctgt gattttttat tggaaatagg atcaaataca atcgcgaatg cgctgcagag
     8341 gctcttggca gtcatggtgg ccagtgggtg aaaactttac acgaaatcaa cgtcaaaaga
     8401 ggtgtttcgg gcagatttga cgggcaggtc tccgccgagt actctcccgc tcactgactt
     8461 acagtatttt ctaaagcgag gagagtgatt attgatgcca gaagtgattg tgcgcaaagg
     8521 tgaaccggtc gatcgcgcat tgaaacgact gaaaaacaag ctggactccg agggcattct
     8581 cgaggaagtc cgccgtttgc gcgcgttcga gacgccgtcg caaaagcatc gccggaaggc
     8641 gagagccaac gccaagcgcg cccgaatgaa gtttcgattc aattcctaag acagttacaa
     8701 aagttacaac gagcagattc ggacaatcgt tgtaacgatg tagctgtttt accgttcaac
     8761 gagcaaacag ctccctgatc gcccgcacca agccctcgat atcgtgacgg cgcgcttcaa
     8821 tatcgacgtt gagtccctga tcgcgcacgg tctttgacgt gatcgggccg atgctggcga
     8881 tgcgcattcc tttcggccac ggcaggccga gcgccaggaa attttcgact gttgacgaac
     8941 tcgtgaatgt gatgaggtct gcgccttcct gagagagttg ccgctgcgcg ccgctggtgt
     9001 ggcgtgtctc gggaacagtc cggtacgcga acgcttcgtc cacgattgct cctgcggccg
     9061 agagttcttt gggcaaaacg tcgcgcgcct tctccgcgcg cactacaagg atgcgctcgt
     9121 tttcgacgct tccctgtttc ttgaattcgc gcaatactgc ttcggcgacg aattcttctg
     9181 gctgaagatc gacatgcagg tgaaaatctt tcacacgttg cgctgtggcc ggtccaatcg
     9241 cagcgatgcg cgctccgccg atttcacggg cgtcatcgta aagcttgaag aaaatatcaa
     9301 agaacgcgtc gacgccgttc gcgcttgtga acacaatcca atcgtagacg tgcgcgtcct
     9361 gcacgagctc ggcgaactcg cgcaagttgc tcggcggctc gatccgaatc gtgggcagtt
     9421 cgatgacgtg cgccccaagg gctcggagtt tgttgcttaa cacgctcgcc tgctttcgcg
     9481 ttcgcgtgac cacaattctt tttccgagga gcgggcgctt ctcgtaccag tttagcgtgt
     9541 cgcgcaacgt cacgacatct ccaaacaccg ccactgccgg cgcttcaaaa ttcttcgccg
     9601 caactttttg agcaatatcc gaaagcgtgc ctgtaagcgt ttcctgttgg cccgtcgtgg
     9661 ccctacgaac cagcgccacc ggcaaatcgc cgcgcacgcc gtgcttcagc atttcacttg
     9721 taacggctcc gaggcgctcc acgcccataa gcatcacttg tgtgccgcca agtttcgcca
     9781 gcgccgcata atcgattgcg ctttccggtt tggttggatc ttcgtggccg gtgaagaacg
     9841 tcacgtgcga gttatgccca cggtgcgtca ttgggattcc tgcgtaggcc ggacccgcga
     9901 tcgccgaact gattccaggc acaatttcaa acgggattcc cgcactggcg atttcctgcg
     9961 cttcttctgc gcctcggcca aacacgaatg gatcgccgcc ttttaaccga acgacctgct
    10021 ttccttcgcg tgctctgtcg atcagcagcg aagtgatttc ctgctgcgtc cggctttcgc
    10081 cgggttgttt cccggcgtaa atgatttctg catcgtcccg tgcccagccg agcgcatccg
    10141 gatttgccag atgatcgtaa acgatgacat cggcgttctc gatgcattcc tttgcgcgca
    10201 aggtcacgag accgaggtca cctggccctg ctccaaccag ataaactttc ccgtttttgc
    10261 ttacgctctt gctcatgctc tcagtcttcc tcgatttttc gcaacaattc tgctgctaat
    10321 tggtcgccta cgtcggaagc gccctcgact tcagcttgtc gcggcaaggg cgattcacct
    10381 tcgaagactt gtgcgcacac tttcatcttt ccgttgctga tcgtcgcatg cacgccgact
    10441 ggaaaattgc aatcaccgtg cagccgactc aaaaattctc gctctgcctg cagacaaagc
    10501 aacgtttcgg gatggtttag cgactcgaga agtgcctttg tattttgatc atcagcacgg
    10561 atttggagag cgatgattcc ctgaccaccc gcaggaacaa aagtttcgcg tggaagaatc
    10621 tcaagaaaga attgtccacc atcgacaccg atttcggttc ccgttgacga aaaacccaga
    10681 cgctccagtc ccgcgcgagc taacacaatc ccatcccact cattctcagc aagtttgcgc
    10741 agccgggttg gtacgttacc gcgaagatca acgaccttga ggtctgcgcg tttccaattc
    10801 agttggcgct gccttcggac gctgcccgta gccactgtcg cgccataggg aacagaagcg
    10861 agaccgcccg agtgtttgga aatcagcacg tcattggttg gcgcccgagg aagaaccgcc
    10921 gcgatttgtg ctccccgcct ggtttggctc ggcaggtcct tcgcgctatg gactgcgaca
    10981 tctacctcgc cggcgagaag cgctcgttcg atttccgccg tgaataatcc ttttcgacca
    11041 gcggcgagat cgacaacttt ggcgttatcg ccgcgtgtaa caatgatttt agtctcgatc
    11101 gcgacgttcg gatgcgcgct tcgaattgcc ttctcaacca gcagcgtttg tgcgcgcgca
    11161 agctcgctgc cgcgtgtgcc gagggtgatc ttggcaatca tcgcaggaat gtaacgcgcg
    11221 atactttgca ggggaagctg tcagccttcc tacagttccg aagcgcgaag cggattttcg
    11281 ccaagagagg aatgctcggg cgcctgcgaa cgacgattca atcctcgtga gatcgaatcg
    11341 ataaactcag tgacatgatc ggcgatgatg gcttcggccg cagcgacctg ttgccggcgg
    11401 agttcgagcg attgttccgc gacagagcgt atggaatcga tgtcgtaaag ataaacgcct
    11461 tgcagttcat ttacgctggg atcgacgtcc cttggc
//
LOCUS       DATDAJ010000204         2828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1169361, whole genome shotgun sequence.
ACCESSION   DATDAJ010000204 DATDAJ010000000
VERSION     DATDAJ010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2828
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1169361"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /locus_tag="VIS53_05065"
     CDS             complement(<1..1300)
                     /locus_tag="VIS53_05065"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767184.1"
                     /translation="MKIWKIAAIAALGLTAFAADNVAPTKAELEEMYNTAYRAFDAGK
                     FPEALKQLDAIDARQPDLAASKNLRGVILMRQGNYDQAEAALTEAARIDPKFWNARFN
                     MAEIPFLKKDWPEARKRFEQLLSTGQSDLAKEASQLIQYKILLTYLMEGKSNMVDSIL
                     AKLELSPDTPAVDYVKAAVALQQKNETEAKDWITAAEKNYSPQLNKLFVESLYEIGWM
                     EKPSGQRRASLPLMTAAERTEKTKAFARSKFEQSQQAFRQRDFATALKLVDEADKVNP
                     NQPATLNLRGEILMQQGQFDNAETAFKKAAKLDPKLRDAQYNLAQIPFKKKEYAKARD
                     RFETLYKRIPGGEKNQAAELIKFKIYMALLMEGKESRAHSMMEEFQFTGDTPALYYAQ
                     AAWEYKHNNAQKAEDWTGSANKIYSPALNGVFADAFYDVGW"
     gene            complement(1467..2213)
                     /locus_tag="VIS53_05070"
     CDS             complement(1467..2213)
                     /locus_tag="VIS53_05070"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEY5767185.1"
                     /translation="MARRSEYLLIDVSNSYAKLAFASRERVSNPARIPTSEVSSSVVE
                     ELLRRRQVNKVVVSSVVPTKNSAISKAARNKAQVLWLNWKLKLGVTIDYPKPQSIGAD
                     RLANAAAVAELYGSPAIVVDFGTAVTFDVVSERRSYIGGVIAPGLEAMTNFLYQRTAL
                     LPTLSLKEPHRVVGKSTVEAMRSGAIFGYRGLVREILARIKAEQFSRKKVAVVATGGF
                     ARLVTSQVPEVAVIHPHLTLEGLRIVGNLN"
     gene            2318..>2828
                     /locus_tag="VIS53_05075"
     CDS             2318..>2828
                     /locus_tag="VIS53_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY5767186.1"
                     /translation="MRRLVHRPRRLRASPALRNLVRETHLTVHDFILPLFVSEKLDQR
                     RPVVSMPGVFQLPVKEVIDEARRAQDLGLQAILLFGIPARKDEQASGAYAEHGVIQEA
                     LRAIKSKCPELVAITDVCLCEYMSHGHCGVTRIDGDHFHVLNDESVELLVKTALSHAA
                     AGADVVAPSD"
BASE COUNT          589 a          791 c          762 g          686 t
ORIGIN      
        1 accacccgac atcatagaaa gcatcagcaa aaacgccgtt gagcgccggc gagtaaatct
       61 tattggcgga gccggtccaa tcctcggcct tttgcgcatt gttgtgcttg tactcccatg
      121 ctgcctgcgc gtaatagagc gctggggtat caccagtgaa ttggaattcc tccatcatcg
      181 aatgcgccct gctctctttg ccctccatta acagcgccat gtaaattttg aacttgatca
      241 gctcggccgc ctggttcttt tcgccgccgg gtatgcgttt atacaacgtc tcgaaacggt
      301 cgcgcgcttt tgcgtactct ttctttttga atggaatttg cgcgagattg tattgcgcat
      361 cgcgaagttt gggatctaac ttcgccgcct ttttgaaagc ggtctcggca ttgtcgaatt
      421 gcccctgctg catgagaatt tcgcctcgca aatttaaggt cgctggttga ttgggattca
      481 ccttgtcagc ttcgtccacg agcttcagtg ccgtggcaaa atcgcgctgg cgaaacgcct
      541 gctgcgattg ctcaaatttc gaacgggcaa atgccttcgt cttttccgtg cgttcagctg
      601 ccgtcatgag cggtagtgaa gctcgccgtt ggccggatgg tttttccatc caaccgattt
      661 cgtacagcga ttccacgaaa agcttgttta gctgcggtga atagttcttt tccgctgcgg
      721 tgatccaatc cttcgcttcc gtttcgttct tctgttggag cgcgaccgca gccttcacat
      781 aatcaacagc gggtgtatcg ggcgaaagct ccagcttggc cagaatggaa tcgaccatgt
      841 tgcttttgcc ctccatcaga taagtcagca agatcttgta ctggatcagc tgcgaagctt
      901 cctttgccag atcggactga ccggtggaga gcaattgctc gaagcgcttt ctcgcctctg
      961 gccagtcttt tttgagaaat gggatctccg ccatgttaaa gcgcgcattc caaaacttcg
     1021 gatcaatccg tgccgcctcg gtcaatgcgg cttcagcctg atcgtaattg ccctgccgca
     1081 tgagaataac gccgcgcaga tttttcgacg cggcaagatc gggctgccgg gcatcaatgg
     1141 cgtcgagttg ctttagcgcc tcgggaaatt tgcccgcgtc gaacgcgcgg tacgcggtgt
     1201 tgtacatctc ctccaactcc gctttggtcg gggcaacatt atccgccgca aaggccgtaa
     1261 gtcccagcgc tgcgatggca gcgatcttcc agatcttcat gaaccaacga ttcaagccct
     1321 gtttagcatc cctgacaagt cgaaattgtg ttgggcgcga agattttctg ttcggttcgg
     1381 aaaaaccatt tacaaggaac gacggtttgg gcagccgttg attccacgtg tgacggctgg
     1441 gaagacgtca ctccttggtc tgcgatctaa ttcaagttcc ctacgatccg caatccttcg
     1501 agagtcaggt gcggatgaat taccgcgacc tccggcacct ggctggtaac aaggcgcgca
     1561 aaaccgccag tcgcgacgac ggcaactttt ttgcgcgaaa actgctccgc tttgattcgc
     1621 gccagaatct cccgaaccaa tccgcggtaa ccgaagatgg cgccggaccg cattgcctca
     1681 acggttgatt taccgacgac gcggtgtggt tctttcagcg acagcgtcgg gagcagcgct
     1741 gtgcgttgat aaagaaaatt tgtcatcgct tcgagtcccg gcgcaatcac gccgccgatg
     1801 tagctgcgcc gttcggaaac cacatcgaac gtcaccgctg tgccgaagtc cacgacgatc
     1861 gcaggcgatc cataaagttc ggcaacagct gcggcgttcg ccaggcgatc cgcgcctatc
     1921 gattggggtt taggataatc gattgtgaca cccagcttga gtttccaatt cagccagagc
     1981 acttgcgctt tgttgcgcgc ggccttcgag atcgcggagt tttttgtcgg aaccactgat
     2041 gagacgacga ctttgtttac ctgtcggcgc ctcaacaact cctccaccac actgctagaa
     2101 acctcggagg tagggatccg cgcaggattg gagactcgct ctctcgatgc gaacgcaagt
     2161 tttgcatacg agttactgac atcgatcaac aaatattcgg agcgacgggc cacggctaag
     2221 atgcagacac ccaacgctcc gcgccgtcaa gcatccgtca cacacttggt aggacggtcg
     2281 gcttgcgaca atcgcgtcgc gcggctagcc tcgctctgtg agaagattgg ttcatcgacc
     2341 gcgtcgcctg cgggcttccc ctgccctgcg gaacctggtc cgtgaaacgc atttgaccgt
     2401 tcacgatttt attttgccgc tgttcgtgag cgaaaaattg gaccaacgcc ggcctgtcgt
     2461 cagtatgccg ggagtttttc agttgccggt gaaggaggtc atcgatgaag cgcgtcgggc
     2521 tcaggatctc gggctgcaag cgatcctgct tttcggaatt cccgcgcgta aagatgagca
     2581 agcaagcggc gcttacgccg aacatggagt gattcaagaa gcgctccgag cgatcaaatc
     2641 gaaatgcccg gaattggttg cgattacaga cgtttgcctc tgcgaataca tgagccacgg
     2701 ccattgcggt gtcacccgaa tcgacggcga ccattttcat gttctgaacg acgaaagcgt
     2761 cgaacttttg gtgaaaacgg cgctctctca cgcggcagca ggcgcggacg ttgtggcgcc
     2821 gagcgaca
//
LOCUS       DATDAJ010000205         4425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1171678, whole genome shotgun sequence.
ACCESSION   DATDAJ010000205 DATDAJ010000000
VERSION     DATDAJ010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4425
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1171678"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VIS53_05080"
     CDS             <1..359
                     /locus_tag="VIS53_05080"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5767187.1"
                     /translation="ASTTEQWGLVVNEAIASGLPVIVSNRCGCAPELVNGNGFTFDPS
                     NEDELATRLLEMASLSDQERKHLGDNSYRIAANFAPERFGEGLERAASVAMGVPQKRF
                     GVMDRALLLVTASYAR"
     gene            356..1093
                     /locus_tag="VIS53_05085"
     CDS             356..1093
                     /locus_tag="VIS53_05085"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767188.1"
                     /translation="MKENDPVALYFDKLPETHKRQFEERASGANFNFQRRLALACELG
                     GASSGRLLDCAAGTGEITCALLKSGRFNHATVVDVSPAMLQSAKDLLTSQIKNAELEF
                     VQSDVFNFKPSDARFDLILCLGLIAHTGRLDILLPHLRSMLTAGGRIILQTTLTDHLG
                     TRIVRALTSRSELARRGYRISWFSQRNIFGACDRAGLRILEARRHSLGVPFGDRLWPW
                     ANFYIETRLEKWASRHGADAIYLLGAG"
     gene            1090..2238
                     /locus_tag="VIS53_05090"
     CDS             1090..2238
                     /locus_tag="VIS53_05090"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5767189.1"
                     /translation="MRVGFLVSSVSRKAGGLFQSVRGLAKAVASTNADVRVFGIRDEQ
                     SAVDLQEWQPLSVQTFRPGLRAWGYSNQLVPAMLDADLDILSVHGLWKYCSVGSQRWH
                     RQTGRPYVVHPHGMLEPWAVRNAMWKKRIAALLYENQHLRGAACLRALSEAEAQSIRS
                     YGLRNPICVIPNGVDLPDLHESNAKTQRANQKTLLYLGRLHPKKNISNLIRAWNETFN
                     SQCGSSDPWVLAIAGWDQGGYESELKRIAAGTSVVFLGPQFGADKSECYRTCDAFILP
                     SLSEGLPMAVLEAWSYAKPVVMTPECNLPEGFEANAALRIGTTPEEIAAGLKVLREMS
                     DDDRIAMGARGRDLVSENFSWPRIGEQMRSVYEWMLGSAAPPETIRLD"
     gene            2511..3056
                     /locus_tag="VIS53_05095"
     CDS             2511..3056
                     /locus_tag="VIS53_05095"
                     /inference="COORDINATES: protein motif:HMM:NF012360.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid biosynthesis
                     acetyltransferase"
                     /protein_id="HEY5767190.1"
                     /translation="MLDIKENRRARKYSPGEMTRRVLWTFAQPLFRFSPRPCFGWRRF
                     LLRCFGAKIGRSVHVYPSATIYFPWNLEAGDESAISEHVFVYNLGRVTLGSRVTISHR
                     AHLCAGTHDHTKPDFPLLRPPIVIGSDAWICADAFVGPGVTIGEGAIVGARAVAMKDV
                     NPRSIVVGNPARESGKRESSQ"
     gene            complement(3149..3436)
                     /locus_tag="VIS53_05100"
     CDS             complement(3149..3436)
                     /locus_tag="VIS53_05100"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY5767191.1"
                     /translation="MPAYIIVEIEILDPTGYEEYKKLAGATVEKYGGKYIVRGGKTEV
                     LEGDWQPKRIVVLEFESAQRAKEWLNCEEYREPRKMRHRTARTNMILIEGM"
     gene            complement(3477..4205)
                     /locus_tag="VIS53_05105"
     CDS             complement(3477..4205)
                     /locus_tag="VIS53_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CehA/McbA family metallohydrolase"
                     /protein_id="HEY5767192.1"
                     /translation="MAFNIDLHTHSFFSGDGVSSPEDMIAAARAKGLHGIAITDHNTC
                     DAVNYLLQKGLMRLDGLPVDDFLVLPGVEVTTADGHLLCIGAELPYLKGKPAREVCDM
                     IHQRGGLAIPPHPYDLFRAGIRFSTLETLPVDAIEVFNAATTLRRYNRYAFKYAQIRG
                     LPMTAASDAHHAAAVGTAYTIIDTDDFSAKGILAQIVKSNELNQKYQTPRDSLRKTWN
                     NWLRLRRRRKIPELAAKDRSANGH"
BASE COUNT          965 a         1135 c         1292 g         1033 t
ORIGIN      
        1 atgccagcac gaccgagcaa tgggggctgg ttgtgaacga agccatcgca tcgggcttac
       61 ccgtgattgt atcgaaccgg tgtggatgtg caccagagct ggtgaatggc aacgggttta
      121 cttttgatcc aagtaacgag gacgaattgg cgacgcggct gttagagatg gcctcattgt
      181 cggatcagga gcgaaagcac ctcggcgaca acagctacag gatcgcagcg aactttgcgc
      241 cggaacgttt tggtgaaggc ttggagcgcg cagccagtgt ggcgatggga gttccgcaaa
      301 agagatttgg agtaatggat cgcgcgctgt tactcgtcac agcaagttac gcgcgatgaa
      361 agagaatgat ccggtagcat tatatttcga caagcttccg gagactcaca agcgccagtt
      421 cgaggaacgc gcgtcaggcg caaacttcaa tttccaacga cgtctggcac tcgcgtgtga
      481 attgggcggc gcgtcgtcag ggcgattgct cgactgcgcg gcaggcacgg gtgagataac
      541 atgcgcgtta ctcaagtcgg gcagatttaa tcacgcgacc gtagtcgatg tttcgccggc
      601 gatgttgcag agcgcaaagg accttctcac ttcgcaaatc aagaacgcgg aacttgaatt
      661 cgttcagtcg gacgtgttca acttcaagcc atctgacgcg cgttttgatc ttattctctg
      721 cctgggattg attgcgcata ctggacgact ggacattcta ctaccgcatt tgagatcgat
      781 gctcacagct ggcgggcgaa ttattttaca gacaacactg acggatcatc tcggcacacg
      841 cattgtccgt gcacttactt cgcgaagcga gctagcccgg cgcggatata ggatttcctg
      901 gttctcacaa cgaaacatct tcggcgcctg cgaccgcgca gggttgcgga ttctggaggc
      961 gcgacggcac agcctcggtg ttccattcgg cgatcgcttg tggccgtggg caaattttta
     1021 catcgaaacc cggctggaaa aatgggcgag ccgccatgga gccgacgcaa tttatctgct
     1081 cggagcggga tgagagtcgg ttttttggtc agcagcgttt cccgcaaagc gggtggactg
     1141 tttcaaagcg tacgcggact cgccaaggcg gtagcgtcca caaatgcgga tgtgcgggtg
     1201 tttgggatcc gcgacgaaca gagtgctgtc gatttgcagg agtggcagcc gctttctgtt
     1261 cagacatttc gtccgggact gcgcgcgtgg ggctactcaa accagctcgt ccccgcgatg
     1321 ctcgatgccg atctcgacat tttgtcggtg catggcttgt ggaaatattg ctccgtcggt
     1381 tcacaacgat ggcatcggca gacgggtcgc ccctacgtag ttcatccgca cggcatgttg
     1441 gaaccatggg ccgtgcgaaa cgcaatgtgg aagaaacgaa tcgctgcgct tctttatgaa
     1501 aatcaacatt tgcgcggcgc tgcttgcctg cgcgcactct cggaggctga agcgcaatcg
     1561 atccgcagtt atggattacg caacccgatt tgcgtgattc ccaatggagt tgatttgccg
     1621 gaccttcacg aaagcaacgc gaaaactcaa cgggccaatc aaaaaactct tctctacctt
     1681 ggccggcttc acccgaagaa aaacatctcg aatctgatcc gcgcctggaa cgaaactttt
     1741 aactctcaat gcggcagcag cgacccttgg gttctcgcaa tcgccggatg ggatcagggt
     1801 gggtacgaga gcgaactcaa gcgcattgca gctggcactt cggtcgtttt cctcggcccg
     1861 caattcggcg ccgacaaaag cgaatgctat cgcacgtgcg acgcatttat cctgccgtca
     1921 ttgagcgaag ggcttcccat ggcggtgctc gaagcgtggt catatgcgaa gcccgtagtc
     1981 atgacccccg agtgtaatct gccggaaggt ttcgaggcca atgcagcgtt gcgcattgga
     2041 acgactccgg aggaaattgc cgccggtctg aaagtactgc gcgaaatgag tgatgacgat
     2101 cgaatagcaa tgggcgctcg tggacgcgat ctcgtcagcg agaatttctc ctggccacga
     2161 atcggcgaac agatgcgctc agtttatgaa tggatgcttg gcagcgcagc accgccggag
     2221 acgatcaggc ttgactgatg ctgccgtcgg agatcagaag tcggaagtct gaaatcggga
     2281 tggaaatatg ttttggacgt atcagacaac gaatcgcacg ctatctcatg ctgtcattct
     2341 gagcgaagcg aagaatctcg gattgattct ccatcagtgg gccgcgggga gataaattag
     2401 agatgtttcg cttcgctcaa catgacagcg cgtttgtgcg ttccaaagtt cctcccgata
     2461 gataatgtca tccgacattc gactttcgat ctctgatttc tgctaatcgc atgctggaca
     2521 ttaaagaaaa tcggcgggcc agaaaatact caccgggcga gatgactcgc cgtgtcctgt
     2581 ggacgttcgc acagccgctt ttccggttca gtcccaggcc ttgtttcggt tggcgacgat
     2641 ttctgcttcg ctgtttcgga gcaaagattg gccgaagtgt gcatgtctat ccatcggcga
     2701 cgatttattt cccgtggaat ctcgaggctg gagatgaaag cgcgatcagc gagcacgttt
     2761 ttgtttataa tcttggccgc gtgacgctgg ggtcgcgcgt cacgatctcg catcgcgcgc
     2821 atctttgcgc gggaacacac gatcatacga agccggattt tccgctgctg cgtccgccga
     2881 ttgtgattgg ctccgacgcg tggatttgtg cggatgcgtt cgtgggcccg ggtgtcacga
     2941 ttggcgaggg agcaattgtt ggtgcgcgag cagttgcgat gaaggacgta aaccctcgaa
     3001 gcatcgtcgt cggaaatcca gcgcgggaaa gcgggaagcg cgaaagcagt caatgagccg
     3061 ctttgaaggt ttagagattg gcgtttgaca cacacgccct acaatcttat gcgggcacga
     3121 tatttctttt ctgcgagcta cgcttagcct acatgccctc gatcaaaatc atgtttgttc
     3181 tggcggtgcg gtgacgcatc ttgcgcggct cgcgatattc ttcgcagttc aaccattctt
     3241 tggcgcgctg cgctgattcg aactcgagta caacaatgcg cttcggttgc caatcgcctt
     3301 cgagcacttc ggttttgccg ccgcgcacga tgtattttcc gccatacttc tccacggtgg
     3361 cgccagcgag ctttttatat tcttcgtagc cggtgggatc aaggatctcg atctcgacga
     3421 tgatgtaagc aggcatgact cgggtgagaa gcgtttaaga attgaagttg ggaaatttag
     3481 tggccgttcg cgctgcggtc ctttgcggca agctccggaa ttttccttcg ccgccgtagt
     3541 cgcaaccagt tgttccaggt tttgcgcaag ctgtctcgcg gggtctggta tttctggttt
     3601 agttcgttgc tctttacgat ctgcgcgaga attcctttcg cggaaaagtc gtccgtatcg
     3661 atgatcgtat aagccgtgcc aacggcggcg gcatgatgcg cgtcgctggc cgcagtcatc
     3721 ggcagaccgc ggatctgcgc gtatttgaat gcgtaccggt tgtaacggcg aagcgtcgtt
     3781 gccgcgttaa aaacctcgat cgcatccacc ggaagcgtct ccagcgtaga aaatcggatt
     3841 cctgcgcgga acaaatcgta cggatgcgga ggaatggcga gcccgccgcg ctggtggatc
     3901 atgtcgcaga cttcgcgagc tggttttccc ttcaggtaag gaagctctgc gccgatgcag
     3961 agaagatgac catcggcggt cgtgacctcc actccgggga gaacgagaaa atcatcaacc
     4021 ggcaacccat ccagtcgcat caagcctttt tggagcaggt aattgaccgc atcgcatgtg
     4081 ttgtgatcgg tgatggcaat gccatgcaaa cctttggcgc gcgcggctgc gatcatgtct
     4141 tccggactgg agacaccgtc cccggaaaag aacgagtgtg tgtgcaggtc gatgttaaat
     4201 gccattgcct aaagggcagg aataaggagt taaacgaact aaatacctaa aaggtggtcg
     4261 ctagaccagc tcctcgacag cgaaggctga ctcaatggca ggttcatcct gaacacgatt
     4321 gaattggtga tcgtacaacc ggcgatagta gccggatttt tcaaggagct cggcgtgcgt
     4381 gccgatctcc ttgatgtgac cgccgtccat tacgatgatt tggtc
//
LOCUS       DATDAJ010000206         6562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1179549, whole genome shotgun sequence.
ACCESSION   DATDAJ010000206 DATDAJ010000000
VERSION     DATDAJ010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6562
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1179549"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1757)
                     /gene="lepA"
                     /locus_tag="VIS53_05110"
     CDS             complement(<1..1757)
                     /gene="lepA"
                     /locus_tag="VIS53_05110"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY5767193.1"
                     /translation="MAIELTRNFCIIAHIDHGKTTLSDRLLERTGTIQERERQDQLLD
                     SMDLERERGITIKAHPVAMRYTSKSGETYRLNLLDTPGHVDFSYEVSRSLAACEGAVL
                     VVDAAQGVEAQTVANVHLAHKQGLTIVPVINKIDLPNADVAAVKRQLEEILAIPAEEA
                     IEASAKVGIGIEEILEAIVTRVPAPEPPADKTLRALVFDSVFDVYRGVVGYVRVVSGT
                     MEASHAIMLMNNNSRYEIKEVGVFTPKMLPQEKLNPGDVGYFIANIKTTADIKIGDTI
                     TDQRHPARGPLPGFQEIHPMVFSGIYPINTGDFEHLKTAIGKLRLNDSAFVYQPESSV
                     ALGFGFRCGFLGLLHMEIIQERLRREYNMDIIATSPSVVYEVVTTRGEKFLIDNPAHL
                     PNPSLIAEIREPIVRAYVLCPNENIGDILQLILEKRGQMERTESLDTRRVMLHCELPL
                     NEILVDFNDKIKSMTRGYGSMDYEHAGYRAAKLVKLDLLVNGEPVDAFSTIVHKDRAE
                     ARGRQLAAKLKEVIPRQLYAVAIQAAIGGKIIARESVSALRKNVTAKCYGGDITRKRK
                     LLEKQKEGKKRMKSIGKIN"
     gene            complement(1921..3099)
                     /locus_tag="VIS53_05115"
     CDS             complement(1921..3099)
                     /locus_tag="VIS53_05115"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5767194.1"
                     /translation="MNPFIQLTQRYPILFVTLLLACFGLLPVTQAVVPPPDGGYPGGN
                     TAEGQTALFSLTTGSFNTAVGFYSLRSNTEGQFNTGLGAGTLFANTGHQNTATGAAAL
                     LNNTTGVKNTANGALALFSNFTGNSNTAIGDGALFANSGGFNNAAIGYNALLSNTTAG
                     DNAAIGTTALFNNTTGEFNVAIGSQALYNNASGDSNTAIGDSAGFNITGSGNVCIGAG
                     INGVAGENNITRIRNVYDSVATERAVYVTSDNRIGTLTSSRRYKDEIRPMEEASKAIH
                     SLKPVRFRYKKEVDPTRSLCFGLIAEDVAKVSRELVTPDREGKPQTVRYEAINAMLLN
                     EFLKEHRKVESQESRMQQQKATIARQQKQIDTLTEGLRKVTAHIQVSEAAPQTVLDNH
                     "
     gene            3375..3869
                     /locus_tag="VIS53_05120"
     CDS             3375..3869
                     /locus_tag="VIS53_05120"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY5767195.1"
                     /translation="MPKLIISGVAHELVDEAITIGRGPDNTIVVNDPSISTHHAQLLL
                     ESDMYRLKDLDSTNGTRVNGKPVTEAVLRFDDRIRFGAAEARYQSSEVCGSKPLPKPE
                     EIKAHFAEAGAGSPHLTSASPLRRQQQQNDPVRTGILIGLGIVLLVFLGSMIAVLMMH
                     APTL"
     gene            3884..4624
                     /locus_tag="VIS53_05125"
     CDS             3884..4624
                     /locus_tag="VIS53_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY5767196.1"
                     /translation="MAKSGMVHRDRSTSLGTRPRSKRLLLFDIDGTLIHSGGAGVHAL
                     KLAFKERFGIDDDLRDIEIAGMTDSGIVLSILNKHKVPVINENVSGFLDSYVHFLSLE
                     LPRRKGKLLPGVLELLERLKSRPHVVLALLTGNVSRGARLKLEHYGVWHFFEFGAFAD
                     DHRDRNELGRFARARAKEKHGREFATSEIDVIGDTPRDIACGKALGARTIAVATGRWG
                     RDELAKHQPDFLIDDLANVETIMDTLGW"
     gene            4649..4996
                     /locus_tag="VIS53_05130"
     CDS             4649..4996
                     /locus_tag="VIS53_05130"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEY5767197.1"
                     /translation="MKKDPASSDITPRQSRSNVVPLKGEIDLHVSPTVTATLSDEIDK
                     KPERLVVDLSEVSYIDSAGLAALIQAMQKVEGYGGKFMLAGLQETVRSIFEISRLDQV
                     FQIFPDADAALAG"
     gene            complement(5086..6207)
                     /locus_tag="VIS53_05135"
     CDS             complement(5086..6207)
                     /locus_tag="VIS53_05135"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY5767198.1"
                     /translation="MEKKLHITLVRRGYSRSGGAEAYLKRLADGIVKAGHEIQLVTTN
                     EWPEEQWPFGSIKRLVGTTVIGFADELEQVRPQLQCDVLFSLERVWNCDVYRAGDGVH
                     RAWLARRRKFEVPLKQFVRGASRKHRDLLQLEESLFEKRKAGRVIAASQMVVNEITDL
                     YRYPADKIDLVRNGAPLDKFRFDPGLREKSRAELKLKQNQIALLFAGSGWERKGLLFA
                     IEAMALCKNRKMRLLVAGRGEAGPYKTMRLRFWREDPVQFLGEVADLVPVYAAADIFI
                     LPTIYDPFSNACLEALASGLPVITTRSNGFSEILEDGVHGSILDNPANLIGLRDAIRF
                     WTDSSRRDAARSANIERASQFDISKNVAQTLEILTRVSG"
BASE COUNT         1377 a         1890 c         1769 g         1526 t
ORIGIN      
        1 atgttgattt tcccgatgct tttcatccgt ttttttcctt ctttttgttt ctccagtaat
       61 tttcgtttgc gggtgatatc accgccgtag catttcgcgg tgacattttt tcgtaaagcg
      121 gaaacgctct cgcgcgcaat aattttcccg ccaatcgcag cctgaattgc caccgcataa
      181 agctgacgcg ggattacttc cttcagtttg gccgccaact gacgtccacg cgcctcggct
      241 cgatccttat gcacgatggt agagaacgca tcaaccggtt cgccgttaac gagcagatcc
      301 aacttcacca gtttcgccgc cctgtaaccg gcgtgctcgt aatccatcga accgtagccg
      361 cgcgtcatgc tcttaatttt gtcattgaaa tcgaccagaa tttcgttgag cggcagttcg
      421 caatgcaaca tcacgcgacg cgtgtccagc gattcggtgc gttccatctg gccgcgcttc
      481 tccagaatca attgcaggat gtcaccgatg ttttcattcg ggcaaagtac gtacgccctt
      541 acaattggct cccggatttc ggcgatcaga ctcgggttgg gaagatgcgc cgggttatcg
      601 atcaggaatt tctcgccgcg tgttgttacc acctcgtaca ccacactggg gctggtcgct
      661 atgatgtcca tgttgtactc gcgccggagc ctctcctgaa tgatctccat gtgaagcaac
      721 ccgaggaacc cgcagcgaaa cccgaaaccc agcgcaaccg agctttccgg ttgataaaca
      781 aacgccgaat cgttcaggcg cagcttcccg attgccgtct tcaaatgttc gaagtcgccg
      841 gtgttaatcg gataaatccc gctgaagacc attggatgaa tttcctggaa accgggaagc
      901 ggcccgcgcg cggggtgtcg ctggtcggtg atggtgtcgc cgatcttgat gtctgcagtc
      961 gtcttgatgt ttgcgatgaa gtacccgaca tcaccgggat ttaacttttc ctgcggaagc
     1021 attttcggtg taaacacgcc cacctccttg atctcgtacc gcgagttgtt gttcatcaac
     1081 atgattgcgt gactcgcttc catcgttccc gaaacgacac gcacgtaccc aacgacgccg
     1141 cggtaaacat caaacaccga atcaaacacc agcgcgcgca gcgtcttgtc cgccggcggt
     1201 tctggcgccg gaacccgtgt gacgatggcc tcgagaattt cctcgatacc aattcccact
     1261 ttcgcgctcg cttcgatcgc ttcctccgca gggatggcca ggatttcttc caactggcgt
     1321 ttcaccgcgg caacgtcagc atttggcagg tcgatcttgt tgatgaccgg aacaatggtg
     1381 agcccctgct tgtgagcgag atgaacgttc gccactgttt gcgcttccac gccctgcgcc
     1441 gcgtccacga ccaacaccgc gccctcacac gcagcgaggc tgcgcgaaac ttcgtaggaa
     1501 aaatcgacgt gccccggcgt atcgagcaga ttcagccgat aggtctcacc cgacttgctt
     1561 gtgtaacgca tcgccaccgg atgcgccttg attgtgatcc cccgctcgcg ctccaggtcc
     1621 atcgaatcaa gaagctggtc ctgcctctcg cgctcctgga tcgtgccggt gcgctccagt
     1681 aaccggtcgg acaacgtcgt tttgccgtga tcgatgtgcg cgatgatgca aaaattgcgc
     1741 gtcaactcaa tggccatgag agcgccacta tgcgagtgcg cgcatccgcg gtcaattggg
     1801 agcacacagt cgcgaaagaa gcgctctccg ggttatagca gggcgagatt ttattcgaac
     1861 aaccggtgat ccgttgtctc cctgaaatct acaccgctcg cgcggcgcgt aagtgacgtt
     1921 ttagtgatta tccagaaccg tttgcggtgc agcttcactc acttgaatgt gcgcagtcac
     1981 tttccgcagg ccctcagtca gcgtatcaat ttgcttttgc tggcgcgcga ttgtggcttt
     2041 ctgttgttgc attctggact cctggctttc gactttgcga tgctctttga ggaactcatt
     2101 gagcaacatc gcgttgattg cttcgtagcg caccgtttgt ggtttgcctt cgcggtccgg
     2161 cgtcacgagt tctcgactca ctttggccac atcctcggcg atcaggccaa aacagagaga
     2221 gcgcgttgga tcaacctcct ttttgtagcg gaagcggacc ggcttaagcg agtggatcgc
     2281 tttgctggct tcttccatcg gtctgatctc atctttgtat cgtcgcgacg acgttagcgt
     2341 tccaatcctg ttgtctgaag tgacgtaaac cgcccgctcg gtcgccaccg aatcatacac
     2401 attacggata cgggtgatgt tgttctcgcc agcaactcca ttgatgccgg cgccgatgca
     2461 gacattgccg ctgcccgtaa tgttgaatcc ggccgaatct ccgatggcgg tattgctatc
     2521 gccgcttgcg ttgttgtata gcgcttgaga tccgatagcc acgttgaatt cgccggtagt
     2581 attgttgaat agggcggtag tgcctatggc agcgttgtca ccggctgttg tgttgcttaa
     2641 gagcgcattg tagccaatag ccgcgttgtt gaaccccccg ctgttggcaa agagcgcacc
     2701 atcaccgatg gccgtgttgc tgttgccagt gaagttgcta aaaagtgcca acgcaccatt
     2761 tgccgtattc ttaacaccgg tggtgttgtt caaaagtgca gcagcgccgg tggctgtatt
     2821 ttgatgtccg gtgttggcaa agagcgttcc agcgccgaga ccagtgttga attggccttc
     2881 tgtgttgctc cggagcgagt aaaaacctac cgccgtattg aaactgccgg tcgtaagact
     2941 gaagagtgcg gtttgtcctt cggccgtgtt gccacccgga tagcccccgt caggcggtgg
     3001 gacaacagct tgcgttacag gcaaaagccc aaaacaagcg agcaacagcg ttacgaacaa
     3061 aatcggatat ctctgtgtaa gctgaatgaa tggattcatg gttctacctt tctctccccg
     3121 ctcagttaca tttctgaatg gcgggtccgg aagaggcgaa gaaccgagcg gggcagactg
     3181 gcctccgcct gattcagatc cgtttggcga cgcgagtttg aagaaaatcc cgctgagctg
     3241 tcaaacctat tcgccgcaac ttcgagccaa tccaccgtgc gcctttatgg gcgggagcgg
     3301 aacaaggaaa acctctatag tgtgctgacg cctcgacacc agcgcctgaa tcgatacgct
     3361 gtgacgttgt catcatgcca aagctgatca tttcaggcgt tgcacatgaa ctcgtggacg
     3421 aggcgatcac gatcggccgc ggaccggata acaccatcgt cgtcaacgat ccgtctatct
     3481 cgacgcatca cgcgcagttg ctcttggaga gcgatatgta tcgattgaag gatctcgatt
     3541 cgaccaatgg cacgcgcgtc aatggcaagc ctgtgacaga agccgtgctt cggtttgatg
     3601 atcggattcg gtttggcgct gccgaagcga gataccagtc gtcggaagtc tgcggttcaa
     3661 aaccgttgcc gaagcctgag gagatcaagg ctcatttcgc ggaagctggc gcagggtcgc
     3721 cacacctcac cagcgcgtct cccttgcggc gccagcaaca gcagaatgac ccggtgcgta
     3781 ctggaattct tatcggcctg ggaattgtgc tgctcgtctt tctaggaagt atgattgcgg
     3841 tgctaatgat gcacgcacca acgctttgag gcactcgaat ctcgtggcaa aatcgggcat
     3901 ggttcaccgg gatcgctcga cttcgctcgg gacaagaccg cgatcaaagc gcttgttgct
     3961 tttcgacatc gacggcacgt tgatccactc gggcggcgcg ggcgtccacg cgctgaaact
     4021 tgcatttaaa gagcggttcg gaatcgatga cgatctgcgc gacatcgaga tcgcgggcat
     4081 gaccgactcg ggcatcgtgc tgagtattct gaacaagcat aaagttcctg tgattaacga
     4141 aaacgtaagc ggattcctcg acagctacgt gcatttcctt tcgctggagt tgccacgccg
     4201 aaaaggcaaa ctgcttcccg gagtgctgga gttacttgaa cggctgaaat cgcggccgca
     4261 cgtcgtgctg gcgcttctca cgggtaatgt gtcccggggt gcgcgactaa aactcgagca
     4321 ctacggcgtc tggcatttct tcgaattcgg cgcatttgcc gatgatcacc gcgaccgaaa
     4381 cgagctcggc cgattcgctc gcgcccgcgc gaaggagaag cacggacggg agttcgccac
     4441 gtccgagatc gatgtcattg gcgacacccc gcgcgacatc gcgtgcggca aagccctcgg
     4501 cgcgcggacg atcgcggtag caaccggaag atggggccgg gatgagcttg caaagcatca
     4561 gccggatttt ctgattgatg atctcgcgaa cgtggaaaca attatggaca cactcggatg
     4621 gtgatccgtt aacgaattgc acggtaaaat gaaaaaagac ccagcctcat cagatatcac
     4681 gccacgtcag agccgttcca acgttgtgcc gctcaagggc gaaatcgatt tgcacgtatc
     4741 cccgacggtc acggcaacgc tcagcgacga aatcgacaag aaacccgagc ggttggtggt
     4801 cgatctttcc gaggtgagct acatcgacag cgcggggctc gctgccttga ttcaagcgat
     4861 gcaaaaggtg gaaggctacg gaggcaaatt catgctggcc ggattgcagg aaaccgtgcg
     4921 ctcgatcttc gaaatctcgc gacttgatca ggtctttcag attttcccgg acgcggatgc
     4981 cgcgctggct gggtagccat ccgcgtaaca aggagtgacg gcttcccagc cgtcaattcc
     5041 gaatccaccg ctgcccaagc cgtcgttcct tggaggacgc gtgcgctacc cggatacgcg
     5101 tgtcaaaatc tcaagcgttt gcgcgacatt ctttgaaata tcgaactgcg atgcgcgttc
     5161 gatgttcgcc gaacgcgcag cgtcgcgccg tgaggaatct gtccaaaatc gaatagcgtc
     5221 gcgcaagccg atcaggtttg ctgggttgtc gagaatcgat ccgtgcactc cgtcttcgag
     5281 gatttcgctg aacccgttgg aacgcgttgt gattactggt aacccgctag ccagcgcttc
     5341 gaggcaagca ttcgaaaagg ggtcgtaaat tgtgggtaaa atgaagatgt ccgcggccgc
     5401 gtagaccggc acaaggtctg caacttcgcc gagaaattgc acaggatcct cgcgccagaa
     5461 gcgcaggcgc atcgttttat aaggccctgc ttctccccgg cctgcgacca gcagccgcat
     5521 ttttcgattt ttgcagagcg ccatcgcttc gattgcgaac agcaagcctt tgcgctccca
     5581 gcccgaacct gcaaacaaca gcgcaatttg gttctgcttg agtttcaact ccgcgcgaga
     5641 tttttcgcga agcccgggat cgaacctgaa tttgtcgagc ggagccccgt tacgcacgag
     5701 atcgatcttg tccgccgggt aacggtaaag atcggtgatc tcgttcacga ccatttgcga
     5761 agcggcgatc acccgcccag ccttccgctt ctcgaaaagc gattcctcca gttgtaacaa
     5821 atcgcgatgc ttccggctgg cgccgcggac aaattgcttc aatgggacct cgaattttct
     5881 cctgcgcgca agccacgcgc ggtgaactcc gtcccctgcc cggtagacat cgcaattcca
     5941 gacgcgctcg agactaaaca aaacatcgca ctgcagctgc ggtcgcactt gttcaagctc
     6001 gtctgcaaac ccgattaccg tcgtcccgac caggcgtttt atcgacccaa atggccattg
     6061 ctcctcgggc cattcattcg tggtcacaag ctggatctcg tggccggctt ttacgatacc
     6121 atctgcaagg cgtttcaagt acgcctcagc gccaccgctc cgcgaataac cgcggcgaac
     6181 taaagtgatg tggagtttct tttccatgct catcacatcg tgcacgtgac gacacactcc
     6241 ggttgtgtct gtcgcctctc cccttttgta aggggagcgg actgaggtga gggatttcga
     6301 ctgcggcggc acaacgtgcc gaacgaaccc tcatcctccc cctctccctt ggtaagggag
     6361 aggcaaccac atcgggttgt tccgacgctc tcgcccctcc agatccaacc ggtaatttgc
     6421 caccaaccct ttacacgctc cacgttcgcc agaatacttg taagccgatg ctgggtgaaa
     6481 ccctaaatcc gcctgcgcca acgatctgtc caccgcctgt gacgcgtacg ctaccccagc
     6541 gtttgctgta ttcgatcttc gc
//
LOCUS       DATDAJ010000207         2990 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1180755, whole genome shotgun sequence.
ACCESSION   DATDAJ010000207 DATDAJ010000000
VERSION     DATDAJ010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1180755"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1826)
                     /locus_tag="VIS53_05140"
     CDS             complement(<1..1826)
                     /locus_tag="VIS53_05140"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEY5767199.1"
                     /translation="MSQSKLPKSKARPEPAKANTACPIVGIGGSAGGFEAAMDLLRHL
                     PPKTGMAFVIVQHLDPHHGSRLPSLLGKATSMPVTEVTGTITPQPNAVYVQPPNKCVI
                     AKNGKLTLVSRTERLNVAIDHFFESLAEECGSRGIGIVLSGTGSDGTAGLRAIKAAGG
                     LTFAQSEESAKFDAMPRSAIRSGFVDVALPPDAIAREIWRIADHPYLRRPLIDAEEAE
                     KEAYRQADDLGRVFLSLKKQVGVDFSGYKESTLIRRIHRRMALHRIDTLKRYARYLRD
                     DKKEIEALFDDLLINVTRFFRDEKVFRALKKRFLPALLKKKSKARQRELRVWIPGCAT
                     GEEVYSLAICILEALGGQASKWRIQIFGTDLSESVVEHARLGIYSSAIEKDVSQARRK
                     HFFVKRDGGYQIHRNVRDICTFARQNIAADPPFSRLDMISCRNVLIYLSPELHKRCIP
                     HFHYALNPGGLLILGPAESVGLYDELFKLVDKKNKIYTKEVTTTPRPVEFIPQRGLKL
                     AQFGARSTASTGANFDADLLKMADRIILSTYAPAAVVVDDKMQVLQFRGRTDLFLEHM
                     PGPASFGLMQLARTSLVPDLRATIRRSIKTGKPARADRAKVML"
     gene            2103..2918
                     /locus_tag="VIS53_05145"
     CDS             2103..2918
                     /locus_tag="VIS53_05145"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEY5767200.1"
                     /translation="MIKRNIIVVGTSSGGVQTLCELTKYLPEDLDASIFVVMHIGSET
                     MLPEILSDCGNLPAVIAEHGKEYKRGHIYCAAANCHLSIKDHVTVLTRGPRENGHRPA
                     IDVLFRSAAREHRAKVVGVLLTGGRDDGTAGLYAIKARGGVAIVQNPEEAVTPDMPRN
                     ALNMVDVDFCLPVREIADVLVQLANGKAANLTESSNGNAVEDETATDQASGEPPATKS
                     PSRVRNATDRSTRLRRANSHSSNVLSVIGFRRRALAGNTPKRWSGRSGLLAAN"
BASE COUNT          636 a          825 c          842 g          687 t
ORIGIN      
        1 agcataactt tcgcccggtc tgcgcgggca ggtttgcccg ttttgatcga gcgccgaatc
       61 gttgcgcgca gatccggcac caaactcgtg cgcgctagtt gcattagacc gaacgatgcc
      121 gggccgggca tgtgttcgag aaacaggtcg gtgcggccac ggaactggag cacttgcatc
      181 ttatcgtcaa ccacgactgc cgccggcgcg tacgtgctga ggataatgcg atccgccatc
      241 ttcaaaagat cggcatcgaa atttgcgcca gtgctcgccg tcgatcttgc gccaaactgg
      301 gcgagcttaa gaccgcgctg cggaatgaac tcgaccggtc gcggcgtagt tgtgacttcc
      361 ttggtgtaaa ttttgttctt cttgtccacg agtttaaaaa gctcgtcata cagacccacc
      421 gattcggcgg gcccaagaat caacaagccg cccggattga gagcgtagtg aaagtggggg
      481 atgcagcgct tgtgcagttc cgggctgaga taaatcagaa cgttgcggca gctgatcata
      541 tcgagacgcg agaatggcgg atcggccgcg atgttttgtc gcgcgaaggt gcagatatcg
      601 cgcacgttgc gatggatttg gtaaccgccg tcgcgtttaa caaaaaaatg tttccgtcgc
      661 gcctgcgaaa catccttctc gatcgcgctc gagtaaattc ccagccgtgc atgctcgacg
      721 actgactcgc tcaagtcggt gccgaaaatc tgaatccgcc atttcgaggc ctggccaccg
      781 agagcttcga ggatacaaat ggcgagcgaa taaacctctt cgcctgtagc gcaaccaggt
      841 atccagacgc gcaattctcg ttgtcgagct ttgcttttct ttttgagcag cgccggcagg
      901 aagcgtttct ttaatgcgcg gaacaccttt tcatcccgaa aaaaccgcgt cacgttaatg
      961 agcagatcgt caaaaagcgc ttcgatttcc tttttgtcat cgcgcaagta ccgcgcgtag
     1021 cgtttcagcg tatcgatccg atgcagcgcc attcgccggt ggatccgtcg aatcagcgta
     1081 ctttccttgt aaccgctgaa atcgacaccc acctgttttt tcagagaaag gaaaacccga
     1141 cccagatcgt ccgcctggcg ataagcttct ttttcggctt cctctgcgtc gatgagaggt
     1201 cgccgtagat acggatggtc ggcaatgcgc cagatttcgc gcgcgattgc gtctggcggc
     1261 aaagcaacgt ccacaaagcc ggagcgaatc gcgctgcgag gcatggcatc gaattttgcg
     1321 ctctcttcac tttgcgcgaa ggtcaaaccg ccagctgctt tgatcgcgcg caggccggcg
     1381 gtgccgtcac tgccggtccc ggaaagcacg atgccgattc cgcgcgagcc gcattcttca
     1441 gcgagcgatt caaaaaagtg gtcgatcgcg acgttgagtc tctctgtacg gctgaccaat
     1501 gtgagcttgc cattcttggc aatgacgcac ttgttaggcg gctgcacata aacggcgttt
     1561 ggctgtggcg tgatcgttcc tgtaacctcg gtcactggca tcgatgtggc tttgccgagc
     1621 agactaggaa gcctgctgcc atgatgcgga tcgagatgct gcacgattac aaacgccatg
     1681 cctgttttcg gcgggagatg gcgcaaaaga tccattgccg cttcgaatcc accggctgat
     1741 ccgccgatgc ctacaattgg gcaggcggtg tttgccttgg cgggttctgg tctcgctttc
     1801 gacttgggta attttgattg cgacaatttt ctgccgctcg tttttattcg cgaggaggct
     1861 gctctcgata tcgcttttcg ctttgcggcc atgcgccctt tttatgttag ttgcgcctgc
     1921 gcatcacaca agccgcgatt gtgagtggtg gaacgcattg tcctcaacgc gttgcctaat
     1981 cgcctgcggc tttgccgcct gatatccgcg ctttcggcga tggttaggca ttgccttcgg
     2041 agaagtcgat ccacccgttt agtgatatag ctgcgattca cttttgaagg cggcttcatc
     2101 aaatgattaa acgcaacatc attgtcgttg ggacgtcttc cggcggcgta caaacgcttt
     2161 gtgaactcac caaatatctg cctgaagatc tcgatgcttc gatttttgtc gtgatgcaca
     2221 tcggcagcga aaccatgttg ccggaaatct tgagtgactg cggaaatctt cctgctgtga
     2281 ttgccgagca cggcaaagaa tataaacgcg gccatatcta ctgcgccgcg gcgaactgcc
     2341 atctgtcgat taaagaccac gtgactgtct taacgcgcgg cccgcgagag aacggtcatc
     2401 gaccggcgat cgatgtgctg tttcgcagcg ctgcgcgcga gcaccgggcg aaggtagttg
     2461 gcgtgttgct gaccggcgga cgcgacgacg gcacagctgg cctttatgcc atcaaagccc
     2521 gcggcggcgt cgccattgtg cagaaccctg aagaagcagt tacgcccgac atgccacgca
     2581 acgccctgaa tatggtcgat gtcgattttt gcctaccggt ccgcgagatt gccgacgttc
     2641 tggttcaact ggcgaacggt aaggctgcca acctcacaga atcgtcaaac ggaaacgctg
     2701 tggaggatga gacagctacc gatcaagcat caggcgaacc cccggcaacc aaatccccgt
     2761 cacgtgtccg gaatgcgacg gaccgctcta cgaggttaag gagggcgaac tcgcactctt
     2821 ccaatgtttt gtcggtcatc ggttttcgcc gcagagcctt ggcgggcaac acaccgaagc
     2881 gttggagcgg gcgctctgga ctgctagccg caaattgaaa gaacgcatcg tgcttcatga
     2941 gcaattggcc gagcgcaagc ggaacaaggg cgaaaatgaa ttgcgcaaac
//
LOCUS       DATDAJ010000208         4397 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1184107, whole genome shotgun sequence.
ACCESSION   DATDAJ010000208 DATDAJ010000000
VERSION     DATDAJ010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4397
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1184107"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VIS53_05150"
     CDS             <1..243
                     /locus_tag="VIS53_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767201.1"
                     /translation="NALVGTDTIDLYKGSRSQVRDWGVRYVDIDILQWGSEEESLKVL
                     APRRKHNCVRKMVAALEKKKSKTVAQNTPRRTPASN"
     gene            332..1303
                     /gene="galE"
                     /locus_tag="VIS53_05155"
     CDS             332..1303
                     /gene="galE"
                     /locus_tag="VIS53_05155"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEY5767202.1"
                     /translation="MKIFVVGGAGYIGSVCSELLLNEGHEVAIFDNLSEGHRSAVDSR
                     THFIEGELADHEQIEAALSTHRPDAVMHFAANALVGESMQNPSKYFRNNICNGLNLLD
                     AMVATGVRRIIFSSTCALFGPPDRLPIDETAQPRPISPYGESKLAFEKILRWYDEIHE
                     VKFVCLRYFNASGATEKFGEDHRPETHLIPAVLQVALGEKPNVEIYGTDYDTPDGTCI
                     RDYIHILDLANAHILALGEFASGCYNLGTGGGSSVREVIESCRKITGRKIETIEKPRR
                     PGDPPRLIASSTRIKKELGWQPQFQSLDAIIESAWKWHQKFPRGYSD"
     gene            complement(1452..2381)
                     /locus_tag="VIS53_05160"
     CDS             complement(1452..2381)
                     /locus_tag="VIS53_05160"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY5767203.1"
                     /translation="MNRILVIRGGAIGDFILTLPALKALRDARPQAHIEILGYKHIAV
                     LAEKRFYAQAVHSIEYGLLARFFARNSELPAELADYFASFDVIVSYLYDPDLIFETNL
                     RRCGVQNLICGPAKIVENAGHATRQLARPIEELGINVVDFAERIFPSIEDREFACEFL
                     ASVSPPIIAIHPGSGSREKNWPLENWIGLFSPGSRLAHLERLLVISGEADEAQTDRLE
                     REWKNRGVRFVRNLPLPRLAAVLERSVFIGHDSGISHLAAAAGANCILLFGQTDPEVW
                     APKNENVRVLRPPSEKLDDLQIDTVKAALAAAL"
     gene            complement(2474..3022)
                     /locus_tag="VIS53_05165"
     CDS             complement(2474..3022)
                     /locus_tag="VIS53_05165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767204.1"
                     /translation="MIYHLSLHTAGIIAGAFLVVVGVLGLMKPDFAQVMKQFPRSRVA
                     GIVLLTICLAWTMWLLATIQMGEFASFRRPLLIALPIGYVLALFFVDEFLAVRALGIL
                     CLLVAEPLLDAAFLRHETSRLLVTVFAYLLIIAGLFWVAIPYVLRDQINWSARSVFRW
                     RCLHAIVLVYGCVILRFTFTQY"
     gene            complement(3096..>4397)
                     /gene="miaB"
                     /locus_tag="VIS53_05170"
     CDS             complement(3096..>4397)
                     /gene="miaB"
                     /locus_tag="VIS53_05170"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEY5767205.1"
                     /translation="CSVRDMADQKALGKMGMLGPLAKERPHMVFGFLGCMAQARGASL
                     LKGLPHVDLVVGTQKFHHVAEYVDELVARKKNRTSENAERPTSNAQRPMERLMDDLRF
                     SIVDVEEEAGSQSTIRAQQLMPRQATAFASIMQGCNMHCTFCIVPQTRGAERSRSIGE
                     IVAEVRDLVSRGVKEVTLLGQIVNLYGRHEFPKIDNKSPFVQLLESVHEVEGLERLRF
                     TSPHPIGFRDDLVDAISRLPKLAEHVHLPLQSGSNKILKAMHRAYTAEKYLDLVQRIR
                     RARDGIAITTDIIVGFPGEMDDDYRRTRDLVEEIQFDNAFVFRYSPRRDTPAAKMPDQ
                     IDEHVKEERNHDLLEVVNKSNRRILERLVGSQVEVLCEGRSKTNCARLMGRTRTNKIA
                     VFPPSPKQRPTGESEELVGELVNLRIERANGFSLYGMPLLE"
BASE COUNT         1028 a         1220 c         1199 g          950 t
ORIGIN      
        1 aacgctttgg tcggcaccga caccatcgat ctttataagg gcagccggtc gcaggtaaga
       61 gactggggtg tccgatatgt cgacatcgac attttgcaat ggggttcgga ggaagaaagt
      121 ttgaaagttc ttgcaccgcg tcgcaaacac aattgcgttc gcaagatggt cgcagctctc
      181 gaaaagaaga agagcaaaac cgtcgcgcaa aatactcccc ggcgcactcc ggcttcaaat
      241 tagcgagaag acaagcagac gcgcgcgaag aaagcgctac gtggtgagtt acctttgatt
      301 tagcgctaat cacgctgcat tttccccgcc aatgaaaatc tttgtggttg gcggcgcggg
      361 ctatatcggg agcgtttgct ccgagctctt gctgaatgag gggcatgaag ttgccatttt
      421 cgacaactta agtgaaggcc atcgaagcgc cgttgattcc cggacgcatt tcattgaagg
      481 cgagcttgcg gatcacgagc agatcgaggc tgccctttcc actcatcgcc cggacgccgt
      541 gatgcatttc gccgccaacg cgctggttgg cgagtcaatg cagaacccgt cgaaatattt
      601 tcgaaacaac atttgcaatg gattgaatct gcttgatgcc atggtcgcga ctggtgtgcg
      661 gcggatcatc ttttcctcga catgcgccct ttttggtccg cccgatcgcc tgccaatcga
      721 cgaaacggcg cagccgcgtc ctatcagtcc ctacggcgaa tccaaactcg cgtttgaaaa
      781 aattctgcgc tggtacgatg aaattcatga agtgaaattt gtttgtctga ggtacttcaa
      841 tgcctctggc gcaaccgaga aattcggcga ggaccatcga ccggagacgc atctgattcc
      901 ggctgtgctg caggtggcgc tcggtgaaaa accgaacgtc gaaatttacg gcaccgacta
      961 cgacacgccg gatggaacgt gtattcgcga ttacattcac atcctcgatc tcgccaacgc
     1021 gcatattttg gcactcggcg aattcgccag cggctgttac aacctcggca caggtggcgg
     1081 ttcaagcgtt cgagaagtca tcgaatcgtg ccgtaaaatc actggacgaa aaatcgagac
     1141 gattgaaaaa ccacgcagac ccggcgaccc gccccgcctc atcgcgtcct cgacgagaat
     1201 caagaaggaa cttggctggc aaccgcaatt ccaatccctc gacgcaatta tcgagagcgc
     1261 ttggaaatgg catcagaaat ttccccgcgg ctatagcgac taagtggcaa acccggtccc
     1321 cgaatctagt atcgcagcaa gtctgttttg gtagggcgcg tcactccgtg cgcgccgctc
     1381 gcgtgaattg taaaatgcaa cggcgtgcac aggactgccc gccctacctg gcgaccttcg
     1441 cggtttaaca gctacagtgc ggcggcgaga gctgctttaa ccgtgtcgat ttggagatca
     1501 tcaagtttct cgctcggcgg cctgagaact cgcacgttct cgttctttgg cgcccaaact
     1561 tctgggtccg tctgaccgaa gaggagaatg caatttgccc cggcggccgc agccagatgc
     1621 gaaattccac tgtcgtgacc gataaatacc gagcgctcaa gcacggcggc gaggcgaggc
     1681 agcggcagat tcctgacgaa acggacgccg cggtttttcc attcgcgttc caatcggtcg
     1741 gtctgagctt cgtctgcctc gcctgagatc accagcaggc gttccaagtg tgcgagacga
     1801 ctgcctggcg aaaacaagcc aatccagttt tccagtggcc agttcttttc gcggctgccg
     1861 cttcccggat gtattgcgat aatcggtggc gataccgacg cgagaaattc gcaggcaaac
     1921 tcccgatctt ctatcgaagg aaaaattctc tcggcaaaat cgacaacatt gattcccagt
     1981 tcctcgatcg gccgcgcaag ctgccgcgtc gcgtggccgg cgttttcaac gatctttgct
     2041 ggtccgcaaa tcagattttg gacgccacat cgacgaagat ttgtttcgaa tatcaggtcg
     2101 gggtcgtaga gataactgac gatcacatcg aagctcgcga aataatcggc caattccgca
     2161 ggcaattccg agttgcgcgc gaaaaatctg gcgagcagtc cgtattcgat cgaatgcacc
     2221 gcttgcgcat agaaccgctt ttccgcaagc actgcaatgt gcttgtagcc gagaatctcg
     2281 atgtgcgcct gcggccgcgc gtcacgaagc gctttgagtg caggcaaagt gagaatgaaa
     2341 tcgccgattg cgccgccgcg gatcaccaga atgcggttca tgcaatttac tgtagccacg
     2401 gccccatggg ccgtcttttt cgcgcacacc gtgctttcgt caaccggcca caggccggtg
     2461 gctacaggag gatctagtat tgcgtaaacg tgaacctgag aattacgcag ccgtaaacca
     2521 gcacaatagc atgcaggcag cgccagcgaa aaacactgcg cgcgctccaa ttaatttgat
     2581 cgcgaaggac gtacggaatc gccacccaga acaagccggc gataatcagc aagtaagcaa
     2641 acaccgtcac gagcaagcgg ctcgtctcgt ggcgcaaaaa ggccgcgtca agaagcggtt
     2701 ccgccacgag caaacagaga atcccgagag cgcgtaccgc gaggaattca tccacaaaaa
     2761 acagcgcgag cacgtaaccg attggcaaag cgatcaagag cggacgacgg aagctggcga
     2821 attcgcccat ctggatggtg gcgagcaacc acatggtcca agccaggcaa atggtgagta
     2881 gcacaattcc ggcaactcga gagcgtggaa actgcttcat aacttgcgcg aagtccggtt
     2941 tcatcaatcc gagcacaccg actactacga gaaacgcgcc ggcgattatt cctgctgtgt
     3001 gcaaagagag atggtaaatc atgcgtcgaa ctacactgat cgcgtgtgag tttggatacg
     3061 gtggcgcaag ttttcaactt gcgattgaaa atgcgctact ccagcagagg catcccgtag
     3121 aggctgaacc cgttggcgcg ctcgattcgc agattcacaa gctccccaac aagttcctcg
     3181 ctttcacctg ttggccgttg tttcggcgaa ggcggaaata cagcaatctt gtttgtgcgg
     3241 gttcggccca tcaggcgtgc gcaatttgtt ttgctgcggc cttcgcaaag cacttctacc
     3301 tggcttccaa ccaggcgttc aagaatccgg cgattcgatt tgtttaccac ctcgagcaaa
     3361 tcgtgattac gctcttcttt gacgtgttcg tcgatttgat ccggcatttt cgcggcggga
     3421 gtatcgcgcc gcggtgaata gcgaaacaca aaggcgttat cgaattggat ttcctcaacc
     3481 aaatcgcgtg tccgccggta gtcgtcgtcc atttcgccgg gaaagccgac gatgatatcg
     3541 gtggtaatcg caatgccatc gcgcgcccgt cggatgcgct ggacgagatc caaatacttc
     3601 tctgcggtgt acgcgcggtg catcgctttg agaatcttgt tcgagccaga ttgcaacggc
     3661 agatgaacgt gctcggctag ttttggcaat cgggagattg cgtcgaccaa gtcgtcgcgg
     3721 aagccgatcg gatgaggaga agtgaaacga agtcgctcaa ggccttcgac ctcatgaacc
     3781 gattcgagca actgcacgaa tggggactta ttgtcgatct tcggaaattc atgacgaccg
     3841 taaagattaa cgatttgccc cagtagcgtg acttctttga cgccgcgcga aaccagatcg
     3901 cgcacttcgg ccacgatctc gccgatggac cggctgcgtt ccgctccacg cgtctgcgga
     3961 acgatgcaga aagtgcagtg catgttgcat ccttgcatga tcgaggcaaa agccgtcgcc
     4021 tgcctgggca tcagttgctg ggcgcgaatg gtcgattgcg aaccggcttc ctcctcgacg
     4081 tcaacgatcg aaaatcgcag atcatccatc agcctttcca ttgggcgttg ggcgttggac
     4141 gttgggcgtt cggcgttttc tgaagttcga ttcttcttcc gtgcaactaa ctcatccacg
     4201 tactcggcca cgtggtgaaa cttttgtgtg ccaacgacaa gatcgacgtg aggcaaaccc
     4261 ttcagcagcg aggcgccgcg cgcctgggcc atacagccga ggaacccgaa aaccatgtgc
     4321 ggcctttctt ttgccagagg ccccagcatt cccatcttgc caagcgcttt ttggtcagcc
     4381 atgtcgcgca cgctgca
//
LOCUS       DATDAJ010000209         3910 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1189527, whole genome shotgun sequence.
ACCESSION   DATDAJ010000209 DATDAJ010000000
VERSION     DATDAJ010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3910
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1189527"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1154
                     /locus_tag="VIS53_05175"
     CDS             <1..1154
                     /locus_tag="VIS53_05175"
                     /inference="COORDINATES: protein motif:HMM:NF012743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BRCT domain-containing protein"
                     /protein_id="HEY5767206.1"
                     /translation="GILTPVAVLEPVLVSGSTVARATLHNEDEIKRKDIRVGDTVVIE
                     KAGEVIPAVVEVVKSKRPRDTKPFDFAKHIHGKCPVCGGSIRRDPEFVAWRCENLYCP
                     AQTTRRVEFFAARGALDIESIGGIVADKLVERGFVREPLDLFDLKVEQLAKLNLGTEE
                     APRVFGEKNATKAINAIERARTLPLSRWLFALAIPEVGKTTATQLARFHDTIQDISNS
                     QLLRDVVDYHEKRDDKKSAKEIAERLVKSGFAKPSKSKAGKDGIVTEVGPIVAQSVLH
                     FFASPTGKKILRRLKELGIEPKSEKISATKAAELPLAGKMFVLTGTLPSMTREEATEK
                     IEALGGHVTGSVSKKTDYVLAGAEPGSKFDKAKELGVKIIDEAEFRKML"
     gene            complement(1203..2261)
                     /locus_tag="VIS53_05180"
     CDS             complement(1203..2261)
                     /locus_tag="VIS53_05180"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY5767207.1"
                     /translation="MSPLSGSNRRAVIAFALVFCSGASLLFAQEQSATATISHQVREL
                     FDRTAKAVVKIHGVDKHSEICGTGFFVDPTGTLYTAYTVGGEAGNFTVEFEGKKCPAR
                     QLVADIRSGTAILKVDETTPALPIGKSEELEMAAPVISIGYPLDLPKTPNFGMIAGFD
                     RKCLGRYFSTIHLRVNVPTQRGEAGAPLLNMKGEVVGIVVSGLGNNSACYAVPIEAAE
                     KIRSDFVRFGEARHGWIGVNNVSPASRQVEGSRAMVTQVAEDAPAARSGLKEGDVLLQ
                     VGKKKISDPEDVFDASFYITAGDTVPITVMRGDQRITFEVQATMHPASKTGVLLASPG
                     TIPGVIPMSLDDDASPSP"
     gene            complement(2239..2727)
                     /locus_tag="VIS53_05185"
     CDS             complement(2239..2727)
                     /locus_tag="VIS53_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767208.1"
                     /translation="MDEFNDNEIARLLRLKRYEQPPPAYFENFLHEFHRRQRDELLRQ
                     PLWRICLERAHNFMLQLDMRSLASYPTAVAAMLVCAAIFSLKVYQQPETARVATQNPL
                     TLSMPVNAEQEWNLASPVSTQIFRTQPLRSFRESAQTHRAAPPRYVLDSVPVSYEPTF
                     RF"
     gene            complement(2740..3336)
                     /locus_tag="VIS53_05190"
     CDS             complement(2740..3336)
                     /locus_tag="VIS53_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767209.1"
                     /translation="MDQQRSDPDQELVTRTQAGEASAFDDLVVKYTPRLYGLVYNMTS
                     NHEDTNDLLQDIFAKAYKAIRGFRGKSSFYTWIHSIAVNMTLNFLKKRGRRFQLSLDD
                     VDASIQNDKEFMEATATSSPVREADLSELQRRLNEAMMKLSDDHRAVVTMFHIQGMPH
                     AEISKILRVSEGTVRSRLFYANRQLQNYLDEFRKNPVS"
     gene            complement(3446..>3910)
                     /locus_tag="VIS53_05195"
     CDS             complement(3446..>3910)
                     /locus_tag="VIS53_05195"
                     /inference="COORDINATES: protein motif:HMM:NF016206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HEY5767210.1"
                     /translation="DPTKKQLHLSSNVYNTPSVAALGIAAHESGHAIQHARAYAPLKA
                     RMAIVPVTMIASQMLPFIIIGGLFFRITGLITLGIWCYLILLVFQLITLPVEFDASRR
                     AKIILREMGIIQPGEEAVGVNKVLNAAALTYIAAFIAALGNLLWLMSLRDRR"
BASE COUNT          894 a         1056 c         1104 g          856 t
ORIGIN      
        1 cgggaatcct cacgcctgtc gcggtgctgg aacctgttct ggtcagcgga agcaccgtgg
       61 cccgcgccac gttgcacaac gaggacgaaa tcaaacgcaa agacattcgc gtcggcgaca
      121 ccgtggtgat cgaaaaggcg ggcgaagtca ttcctgcagt ggttgaagtt gtgaaatcca
      181 agcggccacg agacacgaag ccgttcgatt tcgcaaaaca cattcacgga aaatgtcctg
      241 tatgtggcgg ttccatccgg cgcgaccctg aatttgtcgc gtggcgctgc gaaaatctgt
      301 attgcccggc gcagacgacg cggcgcgtgg aattcttcgc cgcgcgcggc gcgctcgata
      361 tcgagagcat cggcggaatt gtcgcagaca aacttgttga gcgcggcttc gtgcgtgaac
      421 cgctggatct tttcgactta aaggtcgaac agctcgcgaa actgaatctt gggacagagg
      481 aagcgccgcg cgtgttcggc gagaaaaacg cgactaaggc gatcaacgcg atcgagcgtg
      541 cgcgaacctt gccgttatcg cgctggctgt ttgcgctggc gattccggaa gtaggcaaga
      601 cgacagcaac gcagctcgcc cgatttcatg acacgatcca ggacatttct aattcgcaat
      661 tgcttcgcga cgtcgtggac tatcatgaaa agcgcgacga caagaaatct gctaaagaaa
      721 ttgccgaacg attagtcaaa tcgggatttg cgaaaccgtc gaagagcaag gcaggcaagg
      781 acggtatcgt aacggaagtc ggtcccatag tcgcgcagag tgtcctccat ttcttcgcgt
      841 cgccgactgg caaaaagatt ctacggcgat taaaagaact cggcattgag ccgaagagcg
      901 aaaaaatctc ggcgacaaaa gcagccgaac tgccgctggc gggaaaaatg tttgtcctga
      961 ctggcacgtt gccatcaatg acgcgtgaag aagccacgga aaaaatcgaa gcgctcggcg
     1021 gtcacgtcac aggcagcgta agcaaaaaaa ccgattacgt ccttgccggc gccgaacccg
     1081 gcagcaaatt cgacaaagca aaagagctcg gcgtaaaaat catcgacgag gccgagttca
     1141 gaaaaatgtt gtgaccggac ttccgcgtcc tgttttgcgc caccacacag gccatgtgct
     1201 atttatggcg aaggcgacgc gtcgtcgtcg agcgacatgg ggattacgcc agggattgtt
     1261 cccggcgaag cgagcaacac accggtcttg ctggctggat gcatcgtcgc ttgtacttcg
     1321 aacgtgattc tttgatctcc gcgcatcacg gtgatcggga cggtgtctcc agcagtaatg
     1381 tagaacgaag cgtcaaatac atcctcggga tcgcttattt ttttcttccc gacctgtagc
     1441 agcacgtcgc cttctttaag ccccgagcgt gctgccggtg cgtcctccgc cacctgtgtg
     1501 accatcgctc gcgagccctc gacttgtcgc gacgcgggcg aaacattgtt caccccgatc
     1561 cagccgtgtc gcgcctcgcc gaagcgaaca aagtcgctgc gaattttctc tgcagcctcg
     1621 atcggcacag cgtaacaggc ggaattattt ccgagaccgc taacgacgat cccaaccact
     1681 tcccctttca tgttcaacag cggagcacca gcctcgccgc gctgggtcgg aacgttcacc
     1741 cgtaaatgga tggtggagaa atagcgtccg agacatttcc ggtcgaaccc agcgatcatg
     1801 ccgaagttcg gtgtcttcgg tagatccaga ggataaccga tcgatatgac aggagccgcc
     1861 atttcaagtt cctcggattt accaattggt agcgccggcg tggtctcgtc cactttcaag
     1921 atggctgtcc cactgcggat gtctgccacg agttggcgcg ccggacattt cttgccttcg
     1981 aattcgactg tgaaattgcc ggcttcgcct ccgacggtgt acgcagtgta aagtgttccc
     2041 gtggggtcaa cgaaaaatcc ggtgccgcaa atctcgctgt gcttatctac gccgtgaatc
     2101 ttaaccaccg ctttggcggt ccggtcgaaa agctctcgga cctggtggct gatcgtcgcg
     2161 gtggcggatt gctcctgagc gaaaagcaag ctcgcgcctg aacaaaaaac cagcgcgaat
     2221 gcgatgaccg cgcggcggtt agaacctgaa agtgggctca taactcacgg ggacgctgtc
     2281 gagcacgtag cgtggtggtg cggctcggtg agtctgggcg ctttcacgaa aactgcgaag
     2341 cggctgcgtc ctgaaaatct gcgtggagac cggagatgca agattccatt cttgttcggc
     2401 atttaccggc atcgataaag tgagtggatt ctgagtagcg acgcgagccg tctcgggctg
     2461 ctgataaacc tttaatgaga agatagctgc gcaaacaagc attgccgcga ccgcagtggg
     2521 atacgaggcc agcgatcgca tatccagctg caacatgaaa ttgtgtgcgc gttccaggca
     2581 gatgcgccaa agcggctggc gcagcaattc atcacgttgc cggcgatgga attcgtgaag
     2641 gaagttttcg aaataagcgg gaggcggttg ctcgtatcgc ttcagccgaa gcagcctcgc
     2701 gatttcgtta tcgttaaact cgtccatttt tttgcgccgt tacgagacag gatttttccg
     2761 aaattcgtcc aggtaatttt gcaactgccg gttcgcgtaa aagagcctcg aacgtaccgt
     2821 tccttccgag acacgcaaga ttttactgat ttcagcgtgg ggcatccctt ggatatggaa
     2881 catagtgacg actgctctgt gatcatcaga caatttcatc atggcctcgt tcaatctccg
     2941 ctgcagctcc gagaggtcgg cttcccgcac gggactactc gtggccgtgg cttccatgaa
     3001 ttccttgtcg ttttggatgc tcgcgtcgac atcatccagg ctcagttgaa atcggcgtcc
     3061 gcgttttttg aggaaattca gggtcatgtt cacggcgatg gaatggatcc aggtgtaaaa
     3121 ggaggatttg ccgcggaacc cgcgaatcgc tttgtaggct ttggcgaaaa tgtcctgtaa
     3181 aaggtcattc gtgtcctcgt ggttggacgt catgttgtag accagcccgt agagacgcgg
     3241 tgtatacttg accacgagat cgtcgaacgc gctggcctcg cccgcttggg ttcgcgttac
     3301 caactcctgg tctgggtcgc ttctttgctg atccatcgcc tggcgcttag acttaacacg
     3361 cgcctgcaga cccgacgata acaaatcgga aattcgtcga gcaggtaaag tgagggcgtg
     3421 gtccatttta atgttgctcg atcggtcagc gccggtcgcg cagtgacatt aaccagagca
     3481 aattgcccag tgcggcaatg aatgccgcga tgtaagtaag cgcggcggcg ttcagcacct
     3541 tgttgacgcc taccgcttct tccccgggct gtataatccc catttcccgc aggatgattt
     3601 ttgctcgtcg cgaggcatcg aactccacgg gcaatgtaat caattggaac accagcagaa
     3661 tcaaatagca ccagatgccg agcgtaatca gacccgtgat cctaaagaac aagccaccga
     3721 taatgatgaa tggcagcatc tgtgacgcga tcatcgttac cggaacaatc gccatacgcg
     3781 ccttcagcgg agcgtatgcg cgggcgtgtt gaatcgcgtg tccgctctcg tgcgcagcga
     3841 tgcccaatgc tgccacagaa ggcgtgttat aaacgttgct cgacaggtgc agctgcttct
     3901 ttgtcggatc
//
LOCUS       DATDAJ010000210         5608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1197969, whole genome shotgun sequence.
ACCESSION   DATDAJ010000210 DATDAJ010000000
VERSION     DATDAJ010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5608
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197969"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1309)
                     /locus_tag="VIS53_05200"
     CDS             complement(<1..1309)
                     /locus_tag="VIS53_05200"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosD domain-containing protein"
                     /protein_id="HEY5767211.1"
                     /translation="MKILGSARLQRAGEGILPSRTFPGGWKSQPSSECREESSFRRNA
                     ETSTRDACAPRIIALMLVITTQVGAATLQERIDAAVPGEAIHIEAGVHAGPINIKKPL
                     ALIGEKGSVIRGNGVGSVITIAADDVTLRGLRVTDSGLQLSDDNAAVFVTGNRAKVEK
                     CVIAESLHGVYLKKISGAQILNNRIQGKTTLTPSSEPVEKGIGTSTENCDTTLVSNRR
                     GNGIHQWNCEGNLIRGNEISDTRDGIYFSFTNNSRLENNLVHHVRYGLHYMYSDGNVF
                     ENNTFSENAAGAAIMFSKELVVRGNRFINNRGHRAYGLIFQSSDRSRLEKNEITQNAV
                     GLSFNQCNENQIAGNRVMQNYIGLRFGSNSDGNRFTENVFMQNLHPVETGASDVSGNR
                     WAINGVGNFWDGSFEMDLDRDGVNDLPHRELDLFGVLRRDFPAV"
     gene            complement(1306..1938)
                     /locus_tag="VIS53_05205"
     CDS             complement(1306..1938)
                     /locus_tag="VIS53_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767212.1"
                     /translation="MRGKISNLLGWEFRFLHKPLNLWSRLLLLAAAVTIAVSIFFPLW
                     KMHLIAPQYSDGLDLYIFPYKIQGGGLNGQHLVEINNLNHYIGMKPIQEADFMEMRWM
                     PFVFGLIILMTLRSIVFGEMSNVVDLFAVYSYFGAFSIASFWYRLYEYGHNLDPHAPM
                     HIKPFTPRLIGVEQIANFREHSFPQAGAYLLCVSVLLIVLAGWFSRKERA"
     gene            complement(1996..3948)
                     /gene="nosZ"
                     /locus_tag="VIS53_05210"
     CDS             complement(1996..3948)
                     /gene="nosZ"
                     /locus_tag="VIS53_05210"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR04246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HEY5767213.1"
                     /translation="MKAKSTIALAIIITVVSFVGCGKSSSTNKGDRTANALASYVAPG
                     EKDEYYLFYSGGHSGQVFVAGIPSMRHIVTIPVFAPYPATGYGFDEESKKMLGDFTWG
                     DMHHPALSQTDSKYDGRWLFVNDNANNRIARIDLHDFKTHQILGPIPNSIGNHGSSFI
                     TENSEYILCATRFSVPLPKGRVADPKDYEKEFSGMVSGIKVDPQTGEMKVGWQILTPP
                     FDWDLGSTGKGPSSGWAFWTSYNTEMAHDVLEVNSSQKDRDLCAVVNWRAAEQAVAEG
                     KAEAMDGVPIIDPAKVPGVLYFVPVGKSPHGMDVDPSGKWIVAGGKLQPATTVISFEK
                     LKEAIAKKDFVHGGDVRGVPVLEYNDVVEGEVPVGLGPLHTQFDGKGFAYTSMFIDSN
                     ITKWKLPPWTDEEKKDLNKAVLDKVPAHFSTGHLVVAGSDTKNPYGKWLVAMNKLSAG
                     RHINVGPVQPESSQLIDISGDKMKMIAEAYTEPEPHFAQILKVSEIQPAEVYPKAENK
                     DPNAVWDKENTGVTRNGNQVVAKLTAIRSRFNPDRIDAQVGDDLTVHVTNIEQTRDMI
                     HGFGVIEQNINMVMDPGETKTFHIKLTKAGVFPFYCTNFCSALHQEMQGYLVVSNTGQ
                     PLPGAVYSQPGNATQPAPQPAASQGN"
     gene            complement(3973..4461)
                     /locus_tag="VIS53_05215"
     CDS             complement(3973..4461)
                     /locus_tag="VIS53_05215"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HEY5767214.1"
                     /translation="MRKTVVQLLVLVALGGSAVFWFVTGCSRAPEAPPKEVKIQADDK
                     MRFDVTAFDASPGQKISVTITNIGTTPKFSMGHNFVMLDRAINTGNVQASFLDKASME
                     ASHDYVPPGDKNVLAHSKLLGPGESEVVTFNAPYIPGEYLYLCSFPGHYSQGTKGFMT
                     VK"
     gene            4564..5433
                     /locus_tag="VIS53_05220"
     CDS             4564..5433
                     /locus_tag="VIS53_05220"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY5767215.1"
                     /translation="MHKLLLAACVALALLACGRPTNSDEKAEHYDTRGVVRGFSPDRS
                     TIEIQHENIPDFMPSMTMPFVTRNSKEIADLKTGDAISFRMVVTPKDFWIENVKKIHR
                     EDVNIAEPKRTAPVSTEHDGRLKEGDEMPPFSLTNQNGERISLDTFGDRPFVLTFVFT
                     RCPVPNFCPRMSNNFEELQKSIEKATGPLADVRLLSVTLDPAYDTPKVLSDYAGFHHA
                     DSKIWTFATGDEKEIDSLTSAFSVHRQTEGGTISHGLATALINRNGMVERIWRGNAWT
                     PAEVTQAVQAESK"
BASE COUNT         1252 a         1536 c         1506 g         1314 t
ORIGIN      
        1 cgaccgccgg aaaatcacgg cgcaaaacgc cgaacagatc gagctcgcga tgcggcagat
       61 cgttcacccc atcgcgatcc agatccatct cgaagctacc atcccaaaaa ttgccaactc
      121 cgttgatggc ccagcgattg ccggaaacat cagaggcgcc ggtttctacc gggtgcagat
      181 tttgcatgaa aacattttcc gtgaaccgat tgccgtcgga gttcgagcca aaacgcagtc
      241 cgatgtaatt ttgcatcacg cgattgccgg caatctggtt ttcattgcac tgattaaacg
      301 agagacccac ggcgttctgg gtaatttcat tcttttcgag ccgactccga tcggatgatt
      361 gaaaaatgag tccgtaagcc cggtggccac ggttgttgat gaagcgattg ccgcgcacga
      421 ccaattcttt cgagaacatg attgcggcgc cggcggcgtt ctccgagaag gtgttgttct
      481 cgaaaacatt tccgtccgaa tacatgtagt gcagaccgta gcggacgtgg tggacgagat
      541 tgttctctag gcgcgaattg tttgtgaacg aaaaataaat tccgtcgcgc gtgtcgctga
      601 tttcgttgcc acggatcaaa ttgccttcgc aattccactg gtgaattccg ttgccgcggc
      661 gattggatac cagcgtggtg tcacagttct cggtgctggt tccgattcct ttttcgaccg
      721 gctcgctgga gggggtcagg gtcgttttac cctggatgcg gttgttgaga atctgcgcgc
      781 cggaaatttt tttgagatag acaccatgga gcgactcggc aatgacgcac ttctcgacct
      841 tcgcgcgatt tccggtgacg aagactgcgg cgttatcatc ggacaattgc aacccggagt
      901 cggtcacgcg caatccgcgc aaggtcacat cgtctgccgc gatcgtgatg acgcttccaa
      961 ctccgttgcc gcgaattacc gagccttttt caccaatgag agcgagaggt tttttgatgt
     1021 tgattggccc ggcgtgaacg ccggcttcga tatggatggc ctctccgggc acagcggcat
     1081 cgatgcgttc ctgcagtgtt gcggctccca cctgtgtcgt tatgacgagc atgagcgcga
     1141 tgatccgggg agcgcacgcg tcccgcgtgc tggtttcggc gttccgccga aacgaacttt
     1201 cttcccgaca ctcgctgctc ggttgagatt tccatcctcc aggaaaagtt cgtgaaggca
     1261 gaatgccttc accagcacgc tgcaagcgtg cgctccccag aattttcatg ctcgctcctt
     1321 tctggaaaac cagccggcga gtacaatcag caacaccgaa acgcacagca gataagcgcc
     1381 cgcctgtgga aaactatgct cgcggaaatt tgcgatctgt tccacgccga tcagccgcgg
     1441 tgtaaacggc ttgatgtgca tcggcgcgtg cggatcgaga ttgtgaccgt attcgtaaag
     1501 tcgataccag aacgaggcga tcgaaaacgc gccgaaataa gaataaacgg cgaaaagatc
     1561 gacaacattg ctcatctcgc cgaacacgat cgagcgcagc gtcatcaaaa tgatcagacc
     1621 aaaaacaaac ggcatccatc gcatctccat gaaatcggct tcctggatcg gcttcatgcc
     1681 gatgtaatga ttcaggttgt tgatctcgac caaatgctgg ccattcaagc cgccgccctg
     1741 gattttgtag gggaagatgt agagatcgag tccgtcggag tattgcggcg cgatcaaatg
     1801 cattttccag agcgggaaaa agatcgacac ggcaatcgtg actgcggcgg cgagcagcag
     1861 cagacgcgac catagattga gcggcttgtg cagaaaccga aactcccagc ccagcaaatt
     1921 cgatattttt ccgcgcatga aattttggat cggcgaggct gaaggccgcg accattcagc
     1981 ctcgcttaga tcaaattagt ttccctggct ggcggcgggt tgcggcgccg gctgagtcgc
     2041 attaccgggc tgcgaataaa ccgcgccggg caaaggctgg ccggtgttgc tcaccaccag
     2101 ataaccctgc atctcctgat gcagcgccga gcaaaagttg gtgcagtaga acgggaacac
     2161 tcccgccttc gtcagcttga tgtggaacgt tttcgtctcg cccggatcca tcaccatgtt
     2221 gatgttttgt tcgatcacgc cgaagccgtg aatcatgtcc cgcgtctgtt cgatattcgt
     2281 gacgtgcacc gtgagatcgt cgcccacctg ggcatcgatc cggtccggat tgaaacgact
     2341 gcggattgcc gtcagcttag ccacaacctg attgccgttt cgcgtcacgc cggtattttc
     2401 cttgtcccaa accgcgttcg gatctttgtt ttccgctttc ggatagacct cagccggctg
     2461 gatttcgcta accttgagaa tctgcgcaaa atgcggctcg ggttcggtat aggcctcagc
     2521 gatcattttc attttgtcgc cactgatgtc gatcaactga ctcgactctg gctgcacggg
     2581 tccgacattg atgtggcggc cggccgaaag cttgttcatt gcgaccagcc acttgccgta
     2641 cggatttttc gtgtcgcttc cggcgacaac aaggtggccg gtgctgaaat gcgccgggac
     2701 tttatcaagg actgctttgt tcagatcttt tttctcttca tcggtccacg gcggtagttt
     2761 ccatttcgtg atattcgaat cgatgaacat cgatgtgtaa gcgaagccct tgccgtcaaa
     2821 ctgtgtgtgc agcgggccca gaccgaccgg cacttcgcct tccacgacat cgttgtattc
     2881 gagaacaggc actccccgga cgtcgccacc gtgaacaaag tctttctttg cgatagcctc
     2941 tttcagtttc tcaaagctaa taacggtggt tgctggctga agttttccgc cggccacaat
     3001 ccacttgcca cttggatcaa catccatgcc atgcggtgat ttcccgaccg gcacgaaata
     3061 caaaacgccc ggcactttcg ccggatcgat tatcggcacc ccatccatcg cctctgcctt
     3121 cccttcagcg accgcttgtt cggcggcgcg ccaattcacc acagcgcaga gatcgcgatc
     3181 tttctggctc gagttcactt cgagaacgtc gtgcgccatt tccgtgttgt agctcgtcca
     3241 aaacgcccaa ccgctgctcg ggcccttgcc ggtggaaccg aggtcccaat cgaacggcgg
     3301 cgtcaggatt tgccagccca ctttcatctc gcccgtttgc ggatcgactt tgatcccgct
     3361 gaccatgccg ctgaattcct tttcgtaatc tttcgggtcc gccacgcgtc cttttggtag
     3421 cggcaccgag aaacgcgtcg cacacagaat gtattccgag ttctccgtga tgaaggacga
     3481 tccgtgattg ccgatggaat ttggaatcgg gccgaggatc tggtgggttt tgaaatcgtg
     3541 cagatcaatc cgcgctatcc ggttattggc gttatcattt acgaatagcc agcggccatc
     3601 gtatttggaa tcggtctgcg aaagcgccgg gtgatgcata tcgccccagg tgaaatcgcc
     3661 gagcattttc ttcgattcct cgtcgaatcc ataaccggtg gccgggtacg gcgcgaagac
     3721 tggaatcgta acgatgtggc gcatcgatgg aatgcccgcg acaaacacct ggccggagtg
     3781 tccgccggaa taaaaaagat agtattcatc cttctcgccg ggcgcgacgt aactggcgag
     3841 cgcgttcgcc gtgcgatcgc ctttgtttgt gctgctgctt tttccgcagc caacgaagct
     3901 gacgacggtg atgatgatcg caagcgcgat cgtggatttg gctttcatgt ctggtctttc
     3961 tgtttgtcga tcttatttca ctgtcatgaa tcccttggtg ccctgggaat aatggccggg
     4021 gaacgagcag agatagaggt actccccggg gatgtagggt gcgttgaatg taacgacctc
     4081 gctttcccca ggcccgagca gcttcgaatg ggcgagcacg ttcttgtcgc ccggcggaac
     4141 gtaatcgtgc gacgcttcca tcgaagcctt gtcgagaaac gaagcctgca cgttgccggt
     4201 gtttatggcg cgatcgagca taacaaagtt atggcccatc gaaaacttcg gtgtggtccc
     4261 gatgttcgtg atcgtgacgg agattttttg accgggcgac gcatcaaacg cggtgacgtc
     4321 gaaacgcatt ttgtcgtcag cctgaatttt cacttccttt ggcggtgctt ctggtgcgcg
     4381 cgagcaaccg gtgacgaacc agaaaaccgc gctcccacca agcgcgacca gtacgagtag
     4441 ctgaacaact gtttttctca tgcgctgaaa ttagagcgcc gcgaaaaatc ccgccttgat
     4501 acagatcaag gtttgtgtcg gttttttgtg gaaggaaatc cgacctcgat ctcaattcta
     4561 ccgatgcaca aacttctgct cgcagcctgt gtagctctcg ctctactcgc ttgtgggcgc
     4621 cccacgaact cggacgaaaa agccgagcat tacgataccc gcggagtagt gcggggattt
     4681 tcgccagacc gatcaacaat tgaaattcag cacgaaaata ttcccgactt catgccgtcc
     4741 atgacgatgc cgttcgtgac gcggaattcc aaggaaattg ctgacctgaa gaccggtgac
     4801 gcgatctcgt tccgcatggt agttacaccg aaggatttct ggatcgaaaa cgtgaaaaag
     4861 atccatcgcg aagatgttaa tattgcggaa ccgaaacgaa cggcacctgt ttctacagag
     4921 cacgatgggc gtctgaaaga aggcgatgag atgccgccct tcagccttac gaatcaaaat
     4981 ggtgaacgga tttcgctcga cacatttggt gaccgacctt tcgtgctcac attcgttttc
     5041 acgcgttgcc cagtgccaaa tttctgtccg cggatgtcga acaatttcga ggagttgcag
     5101 aaatcaattg aaaaagccac cggcccgctt gcggacgtgc ggttgctcag cgtcacgctg
     5161 gatccggcct acgacacgcc gaaagttttg agtgattacg cggggtttca tcacgccgat
     5221 tccaaaatct ggaccttcgc aacaggagac gaaaaagaga tcgattcgct caccagcgcg
     5281 ttctcggttc accggcagac tgaaggaggc actatttccc atggactggc gactgcgctg
     5341 atcaatcgca atggaatggt cgagagaatt tggcgtggca acgcctggac gccggcagaa
     5401 gtaactcaag ccgttcaggc agagagcaaa tgaattgcgc tgccgtcagg caaggcacaa
     5461 aaaagagcca gtgaaacgca attcccgcaa agtctgttgc gaagagaaac cccacgatca
     5521 actatgcttt caacagtcga taccatggac gttgcctcgc ctccgcaaaa tgcttcaagc
     5581 aatttgaaga aaacaccgaa ggggtttc
//
LOCUS       DATDAJ010000211         4445 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1201574, whole genome shotgun sequence.
ACCESSION   DATDAJ010000211 DATDAJ010000000
VERSION     DATDAJ010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1201574"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..2937
                     /gene="glnE"
                     /locus_tag="VIS53_05225"
     CDS             178..2937
                     /gene="glnE"
                     /locus_tag="VIS53_05225"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF008292.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEY5767216.1"
                     /translation="MEHRAGWIREKAATSLNPSQVETSLVQLNEQWPAYAEATAGRPA
                     NAMPLSELVEQFPLGEAALLHLLAVSSICATRLTRNPETLLWLAQPEVCRASRSRAEM
                     LAEVDALTSDSGVDTNFEALRFWKGREMTRVAVRELAAVAPLEETTGELSLIAEICLR
                     RVFEFWDAELRQRYGSPKADFAILALGKLGGGELNHSSDVDLLFLYSDEGQLSPNISY
                     HQFFNRLGNKILETFSKPHPAGSLFRADLRLRPEGSAGPLARSLESMENYYAGFGETW
                     ERIALIKARGIAGSRELAYDFLRLHQPFVYPKSPTPDLLEEVANIKHRIERDVVGPEK
                     LDRDVKLGRGGIRDIEFVVQTLQLIHGARNPFLQEPSMLKALRALRELNLLPPDEVLA
                     LDTAYRFLRRVEHRLQIEAEQQTHTVPDEPDPLSRLARSLRFSSASDFTAALQSRMGS
                     VRPIFQRIISGSPAQSAKISVGFFKDAKGAEKALTGLERGAASFHVATRTRQIFQRLR
                     PILLDRISKAADPDATLNQFLRFVESYGLRSLLFELLVTNPKLLELVVKTFDASRFAG
                     DLLIRRPQLLEDITRDPTFDEARSVSENLRRLESLGASANNLDPIRAYRQRQLLRIIL
                     RDVLGLVQPAGTFLELSDVAEACLVFVAKRFASEQLTIIALGKFGGREISYGADLDVL
                     FVGEDVRAAQNLMIAMAQSTAEGNIWPLDARLRPEGEKGPVVCSLDTFESYYSGRAQL
                     WEMQALTRARVVSGPLKNQFMAIAKAAWRRACQDAGLFVKIDDMVQRIRRERGSGSDF
                     LDLKTGVGGIIEAEFLVQALQMRANIWEQNWERAVYALRQSGHLDKSDVERLKNSYAF
                     LRRCELVLRRYDNRSVSTLPSDLDEQRKFANRVGYHDFDAFRRDYVTAREAIHTIYER
                     QITPA"
     gene            complement(2924..3736)
                     /locus_tag="VIS53_05230"
     CDS             complement(2924..3736)
                     /locus_tag="VIS53_05230"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767217.1"
                     /translation="MRTRRLAKKLRKFFGKKRRREISELSTSGIHQAVLRAIATAPAL
                     PISGDYLDVGSGTGELLRLVRARYPFRSFGCDYTDKLLSVPGAEIHTVDLNREPLPFS
                     DNRFALITCIETVEHLENFREVVREIYRVLQPGGVAVFSTPNILNLRSRLRYLSSGFY
                     NLFGPLASDESAIHSTRGHINPVSWFYLSHALLSAGFCDLRVTVDKYQRRSLLAFPFL
                     IVPLYATNWIVYHRDKYTYGTLDERNAWAVRAMNSRDLLLGRTLIVTAVKPA"
     gene            complement(3795..>4445)
                     /locus_tag="VIS53_05235"
     CDS             complement(3795..>4445)
                     /locus_tag="VIS53_05235"
                     /inference="COORDINATES: protein motif:HMM:NF012236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEY5767218.1"
                     /translation="LIILLVDERPEEVTDFRRSHPTAQLMASSNDADIKSHTRISQLA
                     IERAKRLVEAGKHVFILLDSITRTARAFNNAMGGGGRTMSGGIDARAMEIPRKIFAAA
                     RNTEEAGSLTIVATALIETGSRMDELIFQEFKGTGNMEMVLDRKISDQRIYPAIDIFL
                     SGTRREELLLQPWELEKINLIRRGLAGHKPEEAIQRLLMFVKKFPTNTEMLKGIPG"
BASE COUNT          995 a         1218 c         1255 g          977 t
ORIGIN      
        1 agcagcgaac aggacgttcc cgtggaactg gacggtgagt tagccggtaa ttgtccggtt
       61 gactttcaaa tgcacgaaaa agctcttcct gtgctggcgc ctcccgcatc gccgtagcat
      121 tagtctgggc gctgcgacaa ctggtttttc gcccagaacc gcatgatgtt gtgcgcgatg
      181 gagcatcgtg cgggctggat tcgggaaaaa gcagccacat cgctgaaccc ttcacaggta
      241 gagaccagtt tggttcagct caacgaacaa tggcccgcct acgccgaggc tacggcgggc
      301 aggccggcaa acgcgatgcc cctttccgag ttggtcgaac aatttccgtt aggtgaagcc
      361 gcgctactgc atcttctggc ggtctcgagc atctgcgcga cgaggttgac gcgcaatcct
      421 gaaacgctgc tgtggctcgc tcagcccgag gtgtgccgcg catcgcgtag ccgcgcggag
      481 atgctcgcgg aagtggacgc tctgacaagt gattccggag tcgacaccaa tttcgaagca
      541 ttacgatttt ggaagggccg cgaaatgacg cgcgtggccg tgcgcgaatt ggctgcggtc
      601 gcgccgcttg aggagaccac tggggagctt tcactgatcg cagaaatttg ccttcgtcga
      661 gtattcgaat tttgggacgc cgaactgcga caacgttacg gctcgccaaa agcggatttt
      721 gcaattcttg ccctcgggaa actcggcgga ggcgaactca atcacagttc ggacgttgac
      781 cttctttttc tctacagcga cgaaggtcaa ctctcgccga acatttctta tcatcagttt
      841 ttcaatcgac ttggaaacaa gattctcgaa acattttcga agccgcaccc ggccggatcg
      901 ctgtttcgag cggatctgcg gttgcgccct gaaggctcgg caggcccttt ggcccggtct
      961 cttgagagca tggaaaacta ttacgctggg ttcggcgaaa catgggagcg aattgcgctc
     1021 attaaggcgc gcggaatcgc aggcagccga gagttggctt acgatttcct gcggttacat
     1081 cagccattcg tctatccaaa gagtccaacg ccggatttgc tcgaggaggt tgcgaacatc
     1141 aagcaccgca tcgagcgcga cgtcgttggc ccggaaaagc tggatcgcga cgtcaaactt
     1201 gggcgcggcg gcatccgcga catcgagttc gtcgtgcaaa cgctgcagct cattcatggc
     1261 gcgcgtaatc cgtttctgca ggaaccgagt atgctcaagg cgctccgcgc attacgagaa
     1321 ctgaacttgc tcccgcccga cgaagttctg gcgctggata cggcgtatcg attcctccgc
     1381 cgcgttgaac accgcctcca gatcgaagcc gaacaacaga cccacactgt tccggacgag
     1441 cccgatccac tgagccggct cgcgcgcagc cttcggttct cgtcggccag cgatttcaca
     1501 gcggcgctgc agagccgaat gggatcggtg cgccccatat ttcaacggat tatttctgga
     1561 agccctgcgc agagcgccaa aatctctgtt ggatttttca aggatgcaaa aggagcagaa
     1621 aaagcgctca cagggcttga acgaggtgcg gcgagttttc atgtcgccac acgaactcgc
     1681 cagatattcc aaagactgcg cccgattttg ctggatcgga tctccaaagc tgccgacccc
     1741 gatgccactt tgaaccaatt tctccgattc gtggaaagct atggcttgcg cagtttgctt
     1801 ttcgaactcc tcgttacgaa tccgaagttg cttgaactgg tcgtaaaaac tttcgatgcc
     1861 agccgctttg cgggtgatct tctgattcgc cgaccgcaac ttctggaaga catcacgagg
     1921 gacccaacat ttgatgaagc gcggtcagta tcggaaaacc ttcgccgcct cgagtcgtta
     1981 ggcgcgagtg caaacaatct cgatccgata cgcgcctatc gtcagcggca actcttgcgc
     2041 attatccttc gcgacgtact gggactcgtc caaccggcag gaaccttcct cgagctttcc
     2101 gacgtcgcgg aagcgtgtct ggtttttgtc gcgaaacggt tcgccagcga gcaattgacc
     2161 atcatcgcgc tcggaaagtt tgggggacgc gagatcagct acggcgcgga tctggacgtt
     2221 ttgtttgtgg gcgaggatgt tcgcgccgcg cagaatctca tgatcgccat ggcacaatca
     2281 accgccgagg gaaatatctg gccgctagat gcaaggctgc gtcctgaagg cgaaaaaggc
     2341 ccggtggtct gctcgcttga tacttttgag tcgtattact caggccgagc gcagctatgg
     2401 gaaatgcagg cactgactcg cgcgcgcgtt gtcagtgggc cgctaaaaaa tcaattcatg
     2461 gcgatcgcaa aagccgcctg gcgtcgcgca tgccaggatg ccgggctctt cgtgaaaatc
     2521 gatgacatgg tgcagcgaat tcggcgagag cgcggaagcg gatcggattt tctcgatttg
     2581 aaaaccggag ttggcggcat catagaagcg gagtttctcg ttcaagcgtt gcagatgcgc
     2641 gcaaacattt gggaacaaaa ctgggagcgt gcggtctacg cattgcgcca gagcgggcat
     2701 ctggacaagt cggacgttga gcggctcaag aattcttatg cgtttctgcg ccgctgcgaa
     2761 cttgtgttgc gtcgatacga caacagaagc gtttcaacac ttccgagcga tctggacgaa
     2821 caacgaaaat ttgccaaccg tgttggctat catgattttg acgccttccg tcgcgactac
     2881 gtcactgctc gcgaggcgat tcacacaatc tacgaacggc aaattacgcc ggcttaactg
     2941 ccgtcacgat taacgttcgc ccaagcagca ggtcgcgtga attcatcgct cgaacggccc
     3001 aggcattccg ttcgtccagc gtgccgtaag tgtacttgtc acgatgatag acaatccagt
     3061 ttgtggcgta cagaggaacg atgaggaacg gaaatgccag aagagagcgg cgctgatatt
     3121 tatccacagt cactctcaaa tcacagaaac cagcgctgag tagtgcgtgc gacagataga
     3181 accagctcac cgggttgatg tgaccgcgcg tgctgtgaat ggcggattcg tctgacgcca
     3241 gagggccgaa caaattataa aagccggacg agagatagcg cagacgagag cgcagattca
     3301 aaatattcgg ggtcgaaaat accgcgacgc cacctggttg gagaacgcga taaatttccc
     3361 ggaccacctc tcggaaattt tccaagtgct caaccgtttc gatgcaggta atcagcgcga
     3421 agcgattatc gctaaaggga agcggttcgc gattcagatc gacggtgtgg atctcggcac
     3481 cgggaacgga gagcaattta tccgtgtaat cgcatccgaa agaacgaaag ggataacgag
     3541 cgcgaaccag acgcaacaat tccccggtcc cgctacctac atcgaggtag tctccgctga
     3601 ttggcaacgc cggcgcagtc gcgattgcgc gcaggactgc ttgatgaatc cctgacgtgc
     3661 ttaactcgga aatctcgcgc cgtcgctttt tcccaaagaa ctttcggagc ttcttggcaa
     3721 gccttcgagt gcgcacagcg aattttgaac cgtctccgag cgcgcgtcga gatcggcaat
     3781 cgtctgcgaa ccaatcagcc cgggatgccc ttaagcatct ccgtgttggt cgggaatttt
     3841 ttcacaaaca ttaacagtcg ctgaattgct tcctctggct tatgtccggc cagaccgcgc
     3901 cggatgagat tgattttctc cagctcccac ggttgcagca acagttcttc gcggcgcgtt
     3961 ccggacaaaa agatgtcgat ggctggataa attcgctggt cgctgatttt tcggtctagc
     4021 accatttcca tatttccggt gcctttgaat tcctgaaaga tcagctcatc catgcggctg
     4081 ccggtttcaa tcagcgccgt ggcgacaatc gtgagcgaac ccgcttcctc ggtgttgcga
     4141 gcggctgcga aaatctttcg tggaatttcc atggcacgcg catcgatgcc accgctcatc
     4201 gtgcggccgc caccgcccat ggcattatta aaggcgcgag ccgtgcgcgt gatggaatcg
     4261 aggaggatga acacatgttt cccggcttcg accagtcgtt tggcgcgctc gatcgccagt
     4321 tgagaaatcc gcgtgtgact ctttatgtcg gcgtcgttgg aactggccat cagctgcgct
     4381 gtcggatgcg aacgacgaaa atcagtcact tcttcgggac gttcatcgac cagaagaata
     4441 atgag
//
LOCUS       DATDAJ010000212         5390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1212086, whole genome shotgun sequence.
ACCESSION   DATDAJ010000212 DATDAJ010000000
VERSION     DATDAJ010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1212086"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..325)
                     /locus_tag="VIS53_05240"
     CDS             complement(176..325)
                     /locus_tag="VIS53_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767219.1"
                     /translation="MKKVLRSVWRSLMRATYRKHDPFLVYSITSFNSGGGWNDFLLKA
                     SLQNT"
     gene            complement(327..923)
                     /locus_tag="VIS53_05245"
     CDS             complement(327..923)
                     /locus_tag="VIS53_05245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767220.1"
                     /translation="MKRIKLTSDMMNMVVDNRITKTPELTGQFMVFPKSFGSEDAARK
                     PLARMSREQLAAFLNAESGNARSAHFSAPPAEPTPPTAEKGLAIGVLKQAASDLRRYR
                     TATKAAHRELYLDAHSWVTAYDSSWPYSFMNVCKLLNLCPEMVRADLLADASLGSFHY
                     WIRRAGRLSRKLSTSVVRVFEGRRSSEGVEGNQFAASV"
     gene            complement(1077..1580)
                     /locus_tag="VIS53_05250"
     CDS             complement(1077..1580)
                     /locus_tag="VIS53_05250"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5767221.1"
                     /translation="MAAEPLITTYLEMRSRDQLRPKRADARFQVRERTERDWRFNREL
                     YFRVGERWDWIDKRPWTDEQWKEYATAPELRTFAGYYGEALSGYYELRRDRKNGIEIA
                     YFGMLPEWIGRGLGGALLTSAIEGAWRMEPNPSRVWVHTCNRDHPQALANYQARGMIV
                     YKVEKEA"
     gene            complement(1591..2886)
                     /locus_tag="VIS53_05255"
     CDS             complement(1591..2886)
                     /locus_tag="VIS53_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767222.1"
                     /translation="MRTFRHENADKTRTCLAVTKWSCSPVVGRLLFAWAVATNFCSAD
                     PADDSKSVTRTRLERIESLRKERPNDGLLVFYEAITRIDLGDRDAAFALLRSLQGRKL
                     GLVPARDAGFEGVWNDPEFQKIREKLANEEPRTPEAPVAFRLVDPKLIPEGVAYDPKQ
                     DRFLIGSVAQKKIVSANRKGEVKDFSKPEDNLDCVLGVFIDVVRGQLYAVSTNGFLDE
                     AQKQRRNAVVRYDLKNGLLVNRYDAPDANQLNDLAIAADGTIYVTDSASGTLFRKTPD
                     EKMLTPFGAKGALSGANGIALGADGKLYVAISTGIATIDRATGAPTRLPQPHTVVTGG
                     CDGLYWHSGDLVGIQNVTNPGRVIRIALGDQGTRISAITVLQSHHDPEFAEPTTGAIA
                     GDALFVIANSHVGHFQPNGSIKDAGQLKPTAIVAVPLKP"
     gene            2967..4511
                     /locus_tag="VIS53_05260"
     CDS             2967..4511
                     /locus_tag="VIS53_05260"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEY5767223.1"
                     /translation="MHKRKSLPQKRRRRSIIAFEMIRLDRTSKEPLHEQLYRQIRDEL
                     KSGKFSDGSSRLPSSRALATDWRISRSTVRLAFLKLHAEGYLRSKSGSGTFVASLLPE
                     TFLTAEQPKAYQSIHRPIRISDRVRAIPDARVGDQFDLGATAAGAGVSLVASIPAVDE
                     FPIAVWERLRSQVLAKKGVNLLRYASNRGDADLRKALAAYLCDFRAARCHPDQIVIVA
                     GMQQAMLISAMAMLNPGEVAWIEDPCYQQARRVLTLAGVKIIPKPIDKQGLVIAQSPK
                     EPPPRIIYVTPSHQFPLGVTMSFQRRTDLIDFARTHNAFVFEDDYDAEFRFVGPPLPS
                     LQGMDDASRVIYAGTVSKILCPSLRLGYIVAPEPLVDSLVKIRSAMDQHSSPIDQATL
                     ARFITEGFFLSHIRRMRKIYAERRDFFIKQFNELLGDRFTLQVPEAGLNIVAWLKREE
                     DFPVIKRITSDIGVRPSALSFFCIQAKLKPAFVFGFAAWTPTQIRESLIKLASALSNR
                     AKDLNT"
     gene            complement(4630..5175)
                     /locus_tag="VIS53_05265"
     CDS             complement(4630..5175)
                     /locus_tag="VIS53_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767224.1"
                     /translation="MNKEIEMDNNKKRDIEHRKGHLGIAMAVGVLLVLSAVSAASASG
                     PGDARGTVAGWSQGCAEQFELAQRTDMESFRDYDRETFREGHDPRAVTIFASGAVRYG
                     IDAIMAALESHFANREAIWAWTELYRVVDGCHSAFILYDATYDIPSIGYHQRTLTGVT
                     YTHDGNRWLSIADQGTYLEAP"
BASE COUNT         1149 a         1569 c         1427 g         1245 t
ORIGIN      
        1 gtctcgcttg cggcgacctg gcttagatta acgttgcttg ccgcgatatt cgcgttatgc
       61 ccaccgcgcg caggcccctg cccctgctct cgtgcgatgg caccgaagct caggagtacg
      121 aacactacgg ctacagccag tgccacgatc gcttccgtag agaatttcat cgcgattatg
      181 tgttttgcag cgacgccttc agaaggaaat cgttccatcc gccgccggag ttgaacgaag
      241 tgatgctgta aaccaggaac ggatcatgtt tccgataggt agcgcgcatc agcgaccgcc
      301 atacagaacg caataccttt ttcatatcag acagatgcag caaattggtt accctcgacg
      361 ccttccgagc ttcggcggcc ttcgaaaacg cgaacaaccg aggtgctgag ttttcgggaa
      421 agacgtcctg cacgccgaat ccagtaatga aaggatccaa gtgacgcatc ggccaaaaga
      481 tccgcgcgca ccatttcggg gcagagattg agcaatttac aaacattcat gaacgaatac
      541 ggccaggaag aatcatatgc cgtcacccaa ctgtgggcgt cgagatacag ttcccgatgg
      601 gcggctttcg tcgccgtccg gtaacggcgc aaatcggacg ctgcctgttt caacacaccg
      661 atagccaggc ccttctcagc cgtcggcggt gtcggttcgg ctggaggagc agagaaatgg
      721 gcgctgcgag cgttgcctga ctccgcattc aaaaacgcgg cgagctgctc gcgcgacatt
      781 cgcgccagtg gctttcgcgc tgcgtcttcg cttccgaaac tcttgggaaa caccataaac
      841 tgaccggtga gttcaggtgt tttcgtaata cggttgtcta ctaccatgtt catcatatcg
      901 cttgttaatt tgattcgctt cattcctttc taaagatttt ggagccggac atttcaaaaa
      961 aattgaaatt tttttatttt tccgcgcgaa tccaagcgat ccagagtctg cgaacctcct
     1021 tttctaaggc gttctgtagg ggaagctgac agcttcccta agcgagaatg ccgcccctaa
     1081 gcctcttttt cgaccttgta aacgatcatc ccacgcgcct gatagttcgc gagcgcctgt
     1141 gggtgatcgc gattacacgt atgcacccac acgcgtgacg ggttcggctc catgcgccac
     1201 gctccctcga ttgcgctggt tagcagtgcg ccgcccaacc ctcggccgat ccattccggc
     1261 aacattccaa agtaagcgat ctcgattccg tttttcctgt cccgacggag ttcgtaatag
     1321 ccagagagag cctcgccata gtatcccgca aatgtccgca gctcgggtgc cgttgcgtat
     1381 tccttccatt gctcgtccgt ccatggtcgt ttgtcgatcc agtcccaccg ctcgccgaca
     1441 cgaaaataga gctcgcgatt gaatcgccaa tcgcgttccg tcctttcacg aacttgaaat
     1501 cgcgcgtcgg cgcgctttgg acgcaattga tcccgcgacc gcatttcgag atatgtcgtg
     1561 attagtggtt ctgctgccat caggatcctg ttatggcttt agtggaacag caacaatcgc
     1621 agtcggcttt agttgccccg catctttgat gctgccattc ggctgaaagt gaccgacgtg
     1681 cgagtttgcg atgacgaaca atgcgtcgcc cgcaatcgcg ccggtcgtag gctcggcaaa
     1741 ttcgggatca tgatgcgatt gcaacaccgt gattgctgaa atccgtgttc cctgatcgcc
     1801 gagcgcaatg cgaatgacgc gccctggatt ggtcacgttc tgaattccaa ccaggtcgcc
     1861 gctgtgccag taaagcccgt cgcaaccgcc ggtgacgact gtgtgtggtt gcggcagacg
     1921 cgtgggcgcc ccggtcgcgc gatcgattgt ggcaatgccg gtcgagatcg caacgtaaag
     1981 cttaccgtcg gcgccaagag cgatgccgtt tgcacctgag agcgcgccct tggccccaaa
     2041 cggcgtgagc attttctcat caggtgtttt ccgaaagagc gttccgctgg ccgagtcggt
     2101 gacgtaaatt gttccgtcgg ccgcgatggc gagatcgttg agttggttag cgtccggtgc
     2161 gtcgtaccga tttacaagca acccgttctt caaatcgtag cgaacgacag cgttgcgccg
     2221 ctgcttttgc gcttcgtcga gaaaaccgtt cgtgcttact gcatacaact gcccgcgcac
     2281 aacgtcgata aacaccccga gcacacaatc cagattgtcc tccggtttcg agaaatcctt
     2341 cacctcgcct tttcgattcg cgcttacgat tttcttttgc gcgacgctgc caattaagaa
     2401 ccggtcttgc tttggatcgt acgccacgcc ttctgggatc agcttcggat cgacgaggcg
     2461 aaacgcgaca ggcgcctccg gcgttcgcgg ctcttcgttc gctagctttt cccgaatttt
     2521 ttggaactcg ggatcgttcc acacgccttc gaacccagcg tcgcgcgctg gaacaagtcc
     2581 caacttccgc ccttgcagac tccgcaacag tgcgaatgca gcatcgcgat cgcccaagtc
     2641 gattcgagta atcgcttcat agaagacaag caaaccatca ttgggccgct cttttcgcag
     2701 cgattcaatc cgttccagcc gtgtgcgcgt tacggacttg gagtcgtcag ccggatcggc
     2761 tgaacagaaa ttcgtcgcta ccgcccaagc gaacagcaat ctgccgacga ccggcgaaca
     2821 tgaccatttc gtcacggcaa gacacgtacg tgttttgtcg gcattttcat ggcgaaaagt
     2881 tctcactgta ttgccatcac catgcgcttc gccaatttgg tcctttttga tgaggagtat
     2941 aatcaggaaa cattcgcgca atcagcatgc ataagagaaa atcgctcccg cagaagcgcc
     3001 gccgccgttc gatcatagca tttgagatga ttcggcttga ccggacgtca aaggaaccgc
     3061 tccacgagca gctttaccgt caaattcgcg acgaactgaa atcaggaaag ttcagcgatg
     3121 gctcgtcgcg acttccttcc tcccgcgctc tggctacgga ctggagaatc tcgagatcga
     3181 cagtcagact cgcgttttta aaacttcatg ccgaaggtta tctccgctca aagtccggct
     3241 ccggaacatt tgtcgcaagc cttctgccgg aaacattctt aaccgcggag caaccgaaag
     3301 cctaccagtc cattcaccgc ccgattcgca tctccgatcg cgtaagagca attccggatg
     3361 cacgcgtcgg cgatcagttt gatctggggg cgacggccgc aggagcaggc gtctcgcttg
     3421 tcgcgagtat tcccgcagtc gacgaatttc cgatcgctgt atgggaacgc ctcagatcgc
     3481 aggttctggc aaagaaaggc gtcaacctgt tgcgctacgc gtcgaaccgt ggggacgccg
     3541 acctgcgcaa ggcacttgca gcgtacttgt gcgatttcag agctgcgcgg tgtcatccgg
     3601 atcagatcgt catcgtcgct ggtatgcagc aggcgatgct gatcagcgcc atggctatgt
     3661 taaatccggg tgaagtcgca tggatcgaag atccctgtta tcagcaagcc cgcagggtcc
     3721 ttactctggc tggcgttaag ataattccca aaccgataga caagcaggga ctcgtgattg
     3781 cgcaatcgcc aaaagaaccg ccgccacgga tcatttacgt aacgccctct catcaatttc
     3841 ctctcggtgt tacaatgagc tttcagcgcc ggactgatct gatcgatttt gcgcgtactc
     3901 acaacgcatt tgttttcgag gatgattatg acgcggagtt ccgttttgtt gggccgccac
     3961 tcccttcgtt acaagggatg gatgacgcca gccgcgtgat ttacgcaggc acggtaagca
     4021 aaattctgtg tccctcattg cgtttgggct acatcgtcgc accagaaccg ctggtggatt
     4081 cgttagtcaa aatccgcagt gcgatggatc aacactcgtc tcccatcgac caggcgacgc
     4141 tggcgcgttt catcacggag ggctttttcc tgagtcacat caggcgtatg cgaaaaatct
     4201 atgccgagcg gcgcgatttc ttcatcaaac aattcaatga gttgcttggt gaccgtttca
     4261 ctttgcaggt tcccgaagcc ggtttgaaca tcgtggcttg gttgaaacgc gaggaagact
     4321 tcccagtgat caagcgcatc acgtctgata tcggagtaag accctcggcg ctctcgttct
     4381 tttgcattca agcgaagcta aagccagcgt tcgttttcgg attcgcggcc tggacaccga
     4441 cacagattcg ggaaagcctg attaaactcg catcagcgct cagcaaccgc gccaaggatc
     4501 taaatacgta gccgcgcaat tagcgccacg cggcgcgcac tgtggtgccg agcagctcct
     4561 cgatcacctt caacggaagc gagcagccag gcgacgcatc ctctcgaacg cccggctgct
     4621 cgacgtcgat tacggagctt cgaggtatgt cccctgatcg gcgatggaca gccatcggtt
     4681 gccgtcatgc gtgtatgtca cgccggtcag cgtgcgctga tggtagccga tcgacgggat
     4741 gtcgtacgtt gcgtcgtaca ggatgaaggc tgagtggcag ccatcgacga cccggtacag
     4801 ttcagtccag gcccaaatcg cctcgcggtt agcgaagtgc gactcgaggg cggccatgat
     4861 ggcatcgatg ccgtagcgca ctgcaccgct cgcgaagatc gtcaccgcgc gggggtcatg
     4921 accctcacgg aaggtctcgc gatcgtagtc gcggaacgac tccatgtcag tcctctgcgc
     4981 cagctcgaac tgctcagcgc acccctgtga ccaccccgct acggtgcccc tggcgtcgcc
     5041 agggccggac gctgatgcgg ccgataccgc actgagcacc aggagaacac caaccgccat
     5101 cgcgattccg agatgacctt ttcggtgctc tatgtctctc ttcttgttgt tgtccatttc
     5161 tatttcctta ttcatgtttt ctccttgtta ttgcttgtta gtgcatgttc tgctgggcaa
     5221 gtttctggag gcggcgagaa tgaaacaaga cccgcttcgc atgtttccca aagcccactt
     5281 tccggaccac tggcgagaaa cgcccggctc catcccagtg aactgaagag aactgctgca
     5341 tgcactatga gccacgccaa gatagctagg ccgagggata attccgtaga
//
LOCUS       DATDAJ010000213         3950 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1216357, whole genome shotgun sequence.
ACCESSION   DATDAJ010000213 DATDAJ010000000
VERSION     DATDAJ010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3950
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1216357"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1369)
                     /locus_tag="VIS53_05270"
     CDS             complement(<1..1369)
                     /locus_tag="VIS53_05270"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5767225.1"
                     /translation="MAEASSEFEGPDFEKGYETGNVRDGEMLLGHAFGEPILVARRGE
                     ELFAIGATCTHYGGPLVKGLMVDCTVRCPWHHARFDLRTGEAIAAPALNNVACYSIEK
                     RGNRFFVTGKSDKKAERRPKSSPDSVVIIGAGAAGGAAAEILRREGYNGPVTLIGADE
                     SLPYDRPNLSKDYLAGSAPEEWIPLRPPEFYREQKIDVLTNTTVTSIDPKARQVTLSD
                     GRSLGYGALLLATGAEPVHLTIPGADLPHVCYLRTLTDSRGIIEKAKNAKRAVVIGSS
                     FIGLEVAWSLRERKLEVAVVGRDSVPLGKVLGTEMGNLVLETHEAHGVKFHLGRTPAA
                     IHDRYVQLDDGTKLECDLVVVGIGVRPNTRLAEKAGIATENGVLVSEFLETNVPGIFA
                     AGDIARWPDPRAGRIRVEHWVVAQRQGQTAARNILGAREPFTSSPFFWSNHFDLHIHY
                     VGHGRG"
     gene            complement(1438..2139)
                     /locus_tag="VIS53_05275"
     CDS             complement(1438..2139)
                     /locus_tag="VIS53_05275"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEY5767226.1"
                     /translation="MRISEMNWMMVEEYLRRDDRAVLPLGCTEQHAYLSLSTDSILAE
                     RLAVDAAEPLGVPVFPVLAYGITPYFRAFPGTITLRVETYMSVVGDILDAMAEHGFKR
                     ILIVNGHGGNTPVQGFVGEWIADHPGVRITFHNWWNATKVWAQVQAIDPIASHASWME
                     NFPWTRLANVEVPSRQKPMSDPEKIRRLDPKSVRGYLNDGNYGGLYQRDDEEMMKIWR
                     AGVEETRALLMEGWD"
     gene            2248..2784
                     /locus_tag="VIS53_05280"
     CDS             2248..2784
                     /locus_tag="VIS53_05280"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEY5767227.1"
                     /translation="MRLLSLNACEESLGIKLWKWEQENLPSVVHSIRTAIAATLSLAV
                     ARLFGLPEAYWAAIATLVVIQSTIGGPVLISIAATALGAMAGALVASYFPGNLLVFAA
                     AVFVLGLLCAAFRMERSAYRNAGVTFAIIVLIPRSHAAWIIALHRFFEVSVGILVALA
                     VVAVWPEPPPGSAKQNAQ"
     gene            complement(2840..3766)
                     /locus_tag="VIS53_05285"
     CDS             complement(2840..3766)
                     /locus_tag="VIS53_05285"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HEY5767228.1"
                     /translation="MRIISLLPAATEIAAALGLMDNIVGVSHECDFPKEANERPRVTR
                     CPVHDIGLSSREVDEWVRRAMNETGTIYTIDEPLLRKLQPDVILTQRLCDVCAVGYGT
                     VAKLAKTLPGPPRVVNLEPSTLTDIFEDIGRVAEACDVPQRGEELIENLSKRVENVRK
                     RAATIPDRPRFFLMEWVDPPFCSGHWGPELVEIAGGHNSLGRKHQPSAQIEWQQILDA
                     RPEIIVLALCGYDINRARRDYELLRRFPGFDSIPGTAGGRVYVVNASSYFARPGPRIV
                     DSLEILAGILHPTEFPEFGSRGPDDPRVVQVG"
     gene            complement(3766..>3950)
                     /locus_tag="VIS53_05290"
     CDS             complement(3766..>3950)
                     /locus_tag="VIS53_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767229.1"
                     /translation="LVGFAVVRRDALLVRFLLFGVLFKQKQANSLLSFALLARSGAPV
                     THRCITLNSTGVYHWE"
BASE COUNT          852 a         1163 c         1031 g          904 t
ORIGIN      
        1 cgcccctgcc atgaccgacg tagtggatgt gcagatcgaa gtgattgctc cagaagaatg
       61 gtgaactcgt gaaaggttcg cgtgcgccga gaatattgcg cgcggcggtc tggccctggc
      121 gctgagctac aacccagtgt tccacgcgga tccggccggc gcgtggatca ggccagcgcg
      181 caatgtcgcc cgcggcaaaa attccgggaa cgttcgtttc caaaaactcg ctgaccaaca
      241 caccattctc agtcgcgatg cctgctttct cagcaagacg cgtgtttggg cgaacgccga
      301 ttccaacaac caccaaatcg cactccaatt tcgttccgtc atcgagctgc acatatcgat
      361 cgtgaattgc tgcaggcgtt cggccgagat gaaatttcac gccgtgcgct tcgtgcgttt
      421 cgagaacgag atttcccatt tcggttccca gaactttccc gagcggcacc gaatctcttc
      481 caacgaccgc gacttccagt ttgcgttcac gcaacgacca cgccacttcc aacccgatga
      541 agctggagcc aataactacc gcgcgctttg cgtttttcgc cttttcgatg atgccccgac
      601 tgtcagtcag cgttcgcaga taacaaacgt gcggcaaatc agcacctgga atcgtgaggt
      661 ggaccggttc agcaccagtc gccagcaaca gcgcgccgta gcctaacgaa cggccgtcgg
      721 acaacgtaac ctgtctggct tttggatcga tgcttgtaac ggtcgtgttc gtaagtacat
      781 cgatcttctg ttcgcgataa aattccggcg gtcgcaacgg gatccattct tctggcgcgc
      841 tgccggctag ataatccttc gaaagattcg gccgatcgta tggcagagat tcatctgcac
      901 cgatcaaagt aaccgggcca ttgtagcctt cgcgacgcaa tatttcggcg gcagctccgc
      961 ccgcggcgcc cgcgccgata attacgacgc tatccggaga tgattttggt ctgcgctccg
     1021 cttttttatc gctcttgccg gttacaaaaa atcggttgcc gcgtttctca atgctgtagc
     1081 atgcgacatt attcaaggcg ggcgctgcaa tagcttctcc tgtgcgcaaa tcgaaccgcg
     1141 catgatgcca ggggcagcgc accgtgcaat cgaccatcag acccttcacc agcgggccgc
     1201 cgtaatgcgt gcaggttgcg cctatagcga aaagttcttc accgcgtcta gctacaagaa
     1261 ttggttcgcc gaaggcgtgc cccaaaagca tttctccatc gcgcacgttt ccggtctcat
     1321 agcctttttc aaaatcaggt ccctcgaatt cgctggatgc ttcagccata aaatctctcc
     1381 tctctgtaga ttagaatcgc tccggagcta atggttgtcc tcacacgcgt gctgttatta
     1441 atcccaccct tccatcaaca acgcgcgggt ctcttccacg cctgcccgcc aaatcttcat
     1501 catttcttcg tcgtctcgtt ggtacagccc gccgtaattg ccgtcgttga gataccctcg
     1561 cactgacttc gggtcgaggc gtcgtatttt ctccgggtcg ctcatcggct tctgccgaga
     1621 aggtacctca acgttcgcca aacgcgtcca gggaaaattt tccatccacg acgcgtggga
     1681 agcgatggga tcgattgcct gcacttgcgc ccagacttta gtcgcgttcc accagttgtg
     1741 gaatgtgatc cgcaccccag gatgatctgc gatccattca ccgacaaacc cttgcacggg
     1801 cgtattgccg ccgtggccgt tgacaatcag gatgcgtttg aatccgtgct ccgccatcgc
     1861 atcgagaatg tcacctacca ccgacatgta ggtttccacc cgaagagtga tcgttcccgg
     1921 aaacgcgcgg aaatacggcg tgatgccgta cgccaggacg gggaatacag gaacgcctaa
     1981 cggctcggcc gcatcgacag ccagtcgttc cgccaaaatg ctgtccgtgc tcaagctcag
     2041 atacgcgtgt tgctctgtgc agcccagtgg cagcactgcg cggtcgtcgc gccggagata
     2101 ttcctccacc atcatccaat tcatttcgct gattcgcata tcttaaggtg acccacagat
     2161 ttcatgagtt cacgcagatt tgtgacaacg cccgcaaccg ctttcgcatt agtagggttg
     2221 ttgagcgaca ccgcctgcta aatcggattg aggttgctgt cactgaacgc gtgtgaagaa
     2281 tcacttggga taaaactttg gaaatgggag caggaaaatc ttccgtccgt cgtacattca
     2341 atacggacag ccatcgcggc cactctatcg cttgcggtcg ctcgtctgtt cggattgccc
     2401 gaggcgtatt gggctgcgat cgctactctg gttgttatcc aatcaacgat cggcggacct
     2461 gtattgattt cgattgccgc tacggcgctg ggggctatgg ccggcgccct tgtggcaagc
     2521 tatttcccgg gaaatctttt ggtgttcgcc gcggctgtgt ttgtgctggg actcttgtgc
     2581 gctgcatttc ggatggagag aagcgcgtat cgcaatgccg gcgtcacgtt cgccattatc
     2641 gtgcttattc cgcgttcaca cgctgcatgg atcattgcac ttcaccgctt cttcgaagtc
     2701 tcggttggaa tcctggtcgc tttggcggtc gtggccgtct ggccggagcc tccacccgga
     2761 tccgcaaaac aaaacgccca ataatccgcg cgtgtgttag cgcacgcgct gcgatcaaga
     2821 acgaactcgg gagattgttt tagccgacct ggaccacgcg tgggtcgtca ggtccgcgtg
     2881 aaccgaactc gggaaattcc gtcgggtgca aaattcctgc gagaatttcc agactgtcca
     2941 caatgcgagg gcccggacgc gcgaagtatg agctggcatt tacgacgtac acccggccgc
     3001 ccgccgtacc gggaatcgaa tcaaaaccag gaaatcgtcg gagcaattcg taatcgcgac
     3061 gcgctcgatt gatgtcgtat ccgcaaagtg caagtacaat aatctctgga cgcgcatcca
     3121 aaatttgctg ccactcaatt tgcgccgacg gctgatgctt tcggcctaac gaattgtggc
     3181 caccagcgat ctcgaccagc tccggacccc aatgaccgga acaaaacggc ggatccaccc
     3241 attccatcag aaaaaaacgt gggcgatccg gaatcgttgc ggcgcgtttg cgcacgtttt
     3301 caacgcgttt cgataaattt tcgatcaatt cttcgccgcg ctgcggtacg tcacacgcct
     3361 ccgccacccg gccaatatct tcgaaaatgt cggtcaaagt cgacggttcg aggttcacta
     3421 ctcgaggcgg acccggcaag gttttagcga gtttcgccac agtgccgtag ccgaccgcgc
     3481 atacgtcgca caatctttgg gtcagaatta catccggttg cagttttcgc agaagcggct
     3541 catcgatggt gtagatcgtt ccagtctcat tcatcgcgcg gcgcacccat tcatccactt
     3601 cacggctcga caggccaata tcatgcactg gacaacgggt aacgcgcggc cgttcgttcg
     3661 cttccttcgg aaaatcgcac tcgtgtgaga cgccgacgat attgtccatt aacccaagcg
     3721 cggcggcgat ttcggtcgcg gcgggcagca gtgaaatgat gcgcattact cccaatgata
     3781 cacacctgtg gaattcagag taatgcagcg atgggtaaca ggtgcaccgc tgcgcgccag
     3841 cagagcgaag cttaaaagcg aattggcttg tttttgctta aataaaactc cgaagagaag
     3901 gaatcgcacg agcaatgcat cccgcctaac gactgcaaaa ccaacgagca
//
LOCUS       DATDAJ010000214         2765 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1219851, whole genome shotgun sequence.
ACCESSION   DATDAJ010000214 DATDAJ010000000
VERSION     DATDAJ010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1219851"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2031)
                     /locus_tag="VIS53_05295"
     CDS             complement(<1..2031)
                     /locus_tag="VIS53_05295"
                     /inference="COORDINATES: protein motif:HMM:NF014598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEY5767230.1"
                     /translation="MRVWKKLLWIGVTAFGIWAVAVLALSRGEQISALWIVIAGFCAF
                     SISYRFYSKWLATKVLVLNEERATPAVLRNDNKDYVPTNRWMVFGHHFAAIAGPGPLV
                     GPVLAAQFGFLPGTLWILIGATLGGGVHDMIVLFASIRRGGKTLGQMVKEEIGRGVGL
                     LALVSVLAIMIILLAVLALVVVQALAESPWGVFTIAVTIPIALIMGIGLRTGKVSVLA
                     VTIFGLCGLAFGVWGGQFLGHFPAIEAWFHQDQKWLAWAIMLYGLAASILPVWMLLTP
                     RDYLSTFLKLGTVAMLAVAIVLINPTLQMPAITKFIDGSGLVFAGPVFPFVCITIACG
                     AVSGFHSLIASGTTPKMIRRESRIRSIGYGAMVAEMMVALTAMIAACVLEPGEYFAIN
                     TKGTPTEVLAKVSAAGFPVTEQDMQTLATNLGESTMFNRAGGAPTFAVGMAHMFARVS
                     AKPTALALWYHFAIMFEALFILTTIDAGTRVGRFLLQDVLGQVWRPLGNTRSWTANFI
                     ASVLLVAAWGWFLYQGVIDPLGGINSLWPLFGLANQLLSVVALCLGTTLLIKMHKAKY
                     IFVTLVPLCFMCAVTFSAGYLKVFSSDPRLGFLSGARSLLSQASTMPDPVKAAELVRQ
                     AGVWRFDALVAVFFLVLVAAIVLGSARQWWQLIRGSKRMVLHENEFVPITPAQ"
     gene            2082..>2765
                     /locus_tag="VIS53_05300"
     CDS             2082..>2765
                     /locus_tag="VIS53_05300"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767231.1"
                     /translation="MQLRHKIRKLVDGQSLASARKRTLRLLRANRFQLETQRVIETID
                     PAGFDQIRRRYAVADPGADWPKYLDLDRWIGVNIRRIRQLELDVARPKRILDLGCGAG
                     YFLYIAQLLGHSGVGLDMDRLPMFREITRLLGVRRVVQQIQAFRPLPSFGQKFDVISA
                     FMICFNNHKMPGLWDVPEWEFFLDDLAKHLKPRGRVWLELNQEYDETFYTPQLKEFFQ
                     KRGAKIDEQK"
BASE COUNT          698 a          796 c          731 g          540 t
ORIGIN      
        1 ctgcgcgggc gtaatcggca caaactcgtt ttcatgcaaa accattcgct tgcttccgcg
       61 aatgagctgc caccattgcc gtgcagaccc aagcacgatc gccgctacga gcacgagaaa
      121 gaacactgct acgagcgcat caaaccgcca tacccctgcc tgccgtacca attcagctgc
      181 cttaaccgga tcgggcattg tcgatgcctg gcttagaagt gaccgcgcgc cactcaaaaa
      241 accaagtctc ggatcggacg aaaaaacttt gaggtaacca gccgagaaag tgacggcgca
      301 catgaagcac agcggcacaa gcgtcacaaa gatatatttc gctttgtgca ttttgatcaa
      361 gagcgtcgtg ccaagacaga gcgccacgac cgacagaagt tgattggcaa ggccaaatag
      421 cggccaaagt gagttgatcc cgcccagagg atcgatgacg ccttgataca agaaccaacc
      481 ccacgctgcg accagcaaca cactggcgat gaagttcgcg gtccacgaac gcgtattccc
      541 gagaggtcgc cacacctgac ccaagacgtc ctgaagtaag aatcgtccga cacgtgttcc
      601 ggcatcaatt gttgtcaaaa tgaacagcgc ttcgaacatg atggcgaagt gataccacaa
      661 cgccaatgcg gtcggcttcg cggaaactcg cgcaaacata tgcgccatgc cgacagcgaa
      721 tgttggcgcg cctcccgcgc ggttgaacat cgtggactcg ccgaggttcg tggcgagggt
      781 ctgcatatct tgttctgtta ctggaaagcc agctgccgaa acttttgcga ggacttcggt
      841 aggcgttcct tttgtattga tcgcgaaata ttctcccggt tccaacacgc acgccgcgat
      901 catcgctgtt aacgcgacca tcatttccgc taccatcgcg ccgtaaccga tgctgcggat
      961 gcgcgactcg cgcctgatca ttttcggcgt cgtgcccgaa gcaatgagcg agtgaaaacc
     1021 cgaaacggca ccgcaggcga tggtgatgca gacaaaggga aacaccggcc cagcgaagac
     1081 aaggccgcta ccgtcgatga attttgtaat ggcgggcatt tgcagcgtcg gattgatcag
     1141 cacgatcgct acggcaagca tggccactgt accaagtttc aaaaatgtgc tgagataatc
     1201 gcgcggggtc agcaacatcc acacgggcag aatcgacgcg gcgaggccat agagcatgat
     1261 ggcccaagcg agccatttct ggtcttggtg aaaccacgct tcaatcgcgg gaaaatggcc
     1321 aagaaactgt ccgccccaaa caccaaatgc cagcccgcat aatccgaata tcgtgacagc
     1381 gagaacgctc acctttcccg tgcgcagtcc gatgcccatg attaaggcaa tcggaatggt
     1441 cacagcgatg gtgaaaacgc cccatggact ctccgccagc gcttgcacca caacgagtgc
     1501 aagaacagcc agcaaaatga tcatgattgc caggacgctg acaagagcga gcaaacccac
     1561 acctcgcccg atttcttcct tcaccatttg gcccagcgtt tttccgccgc gccggatcga
     1621 ggcgaacaga acaatcatat cgtggacgcc accgccgaga gtcgcgccga tcaagatcca
     1681 gagagtgcca gggagaaacc caaactgcgc agccagcacg gggccaacca gcggtccggg
     1741 tccggcgatc gcggcgaaat gatgtccaaa taccatccag cgattcgtcg gcacgtaatc
     1801 tttgttatca tttcgcaaaa ctgcaggcgt cgcgcgctcc tcatttagaa cgagcacttt
     1861 ggtcgcgagc catttactgt aaaaacgata gctgatggag aacgcgcaaa acccggcgat
     1921 gacgatccac agggcgctga tttgttctcc gcgtgagagt gcaagcacgg caacagccca
     1981 aatgccaaaa gccgtcacgc caatccacag cagttttttc cacaccctca tgtggtgaaa
     2041 gcttaattga aattgttgcg cttcgctaca aggtgtgagc tgtgcagctt cgccataaaa
     2101 tacgaaaact ggtcgacggc cagagtctgg ctagcgcgag aaaacgcacc ctcaggctgc
     2161 tgcgcgcgaa ccgttttcag ttggagacac agcgcgtcat cgagacaatc gatccagctg
     2221 gttttgacca gattcggcgg cgatacgccg tagcagatcc cggcgcggac tggccgaaat
     2281 atctcgatct ggatcgttgg atcggagtta acatccggcg gattcgccag cttgaactcg
     2341 acgtggcgcg tccaaagcgc attctcgatc tgggctgcgg cgcagggtac tttctctaca
     2401 tcgcacagct tctcggtcat tccggagttg gcctcgacat ggatcgcctg ccaatgttcc
     2461 gggaaatcac gcgtttgctc ggtgtccggc gcgttgttca acaaatccag gcgtttcgtc
     2521 ccctgccgag tttcgggcaa aaattcgacg tgattagcgc tttcatgatt tgcttcaaca
     2581 atcataagat gcccggactt tgggacgtcc cggaatggga atttttcctg gacgatctgg
     2641 cgaagcatct aaagccgcgc ggtcgcgtct ggctcgaatt aaatcaggaa tacgacgaaa
     2701 ccttttacac gccgcagcta aaggaattct ttcaaaagcg cggcgccaag atcgacgagc
     2761 agaag
//
LOCUS       DATDAJ010000215         3373 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1221905, whole genome shotgun sequence.
ACCESSION   DATDAJ010000215 DATDAJ010000000
VERSION     DATDAJ010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1221905"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VIS53_05305"
     CDS             <1..1077
                     /locus_tag="VIS53_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767232.1"
                     /translation="SRWTSILFRFVGLVLLAAGLSLVVAARGGKLLPSSVGVASAKQL
                     SAAADTERNFSETVALTTNALRWAPLDWELYLERAIAEVELKQTKNAVDDFRRARFLE
                     PIAYEVPLAEGNAWLPYDPVLAVAAWREALRRAGPLRPQVYASMLSDASLSIPEVSPI
                     LEAIGLKEHDLALPYLSRISGDRFNRALAQLLRNDPDLRSFGETEKLALFAFWSERGD
                     PEEISRAVEQHPDWLRYAWLGVEKYNASKQDFRAGYELTQRYGEPVALPRVTTNFSLQ
                     DSEKRFQAAHDNLAIGYELYRAQMQNGRIDDALLTARHFSERPNSPAYFHFLEAQCWA
                     EKQNWERAWNAWQAFHTAQTAEAK"
     gene            complement(1105..2235)
                     /gene="bshA"
                     /locus_tag="VIS53_05310"
     CDS             complement(1105..2235)
                     /gene="bshA"
                     /locus_tag="VIS53_05310"
                     /inference="COORDINATES: protein motif:HMM:TIGR03999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0071793 - bacillithiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-alpha-D-glucosaminyl L-malate synthase
                     BshA"
                     /protein_id="HEY5767233.1"
                     /translation="MKSGPLKIGIACFPLIGGSGILATALGSELARRGHEVYFFSYAQ
                     PVRLDLPQDNLHFHRVDVAHNPLFPSPDYTLPLAVKMTEVARSQQLDLFHVHYAVPHA
                     LAACLASQMLGPSAPRIVTTLHGTDTTLLGQDPDYRTAIEHALVHSDAVTAVSESLRD
                     QTQESFRLKRPIEVIPNFFTPNKPKRSRDEVRRELGITDEFLVQHMSSLRPVKRIDLL
                     LRTIAMSKNRERVRLFIMAGGSFDPYEPLLDELRLRDIVIVRQNTAVVDEYVRAADAG
                     LYTSEYESFGLSILETMFYGKPVVAFRVGGIPEVIGDSCPLYPFGDVTAAAAGLDTLV
                     ESPDLARELGERSRNRALERFSADRILPQYEALYRRVISGRG"
     gene            complement(2235..3002)
                     /locus_tag="VIS53_05315"
     CDS             complement(2235..3002)
                     /locus_tag="VIS53_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767234.1"
                     /translation="MDYPIICFGQQPCGFFPKRFLFAKIVTARRLQKEIGGEIVFFCH
                     DSDHDPRETSTILRDHHSNREVALNFQFENRIQKQFSPLYVKRVLPKWHEKTARQLPS
                     YVPRPLVEHFKKTRSSNVADFCLEMYTRMGLLDGVRVERSSAPQFRARAVAVSDYFVD
                     QPYEGEIVRARYRDGKLLLHKGGDRFLEIPGGEFGPEQISPTRDTRFVWMQSVIRCTH
                     YVTGASEQDYINKADAPEVKFVRREEISDSGKSYTGE"
     gene            complement(3018..>3373)
                     /locus_tag="VIS53_05320"
     CDS             complement(3018..>3373)
                     /locus_tag="VIS53_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767235.1"
                     /translation="HYVVAAQALTAAWGLIAIGVASFVSLVENLIEAGNILGSVFYGS
                     ILGLFLTAFFIRRVTGSAVFFAALIAQTLVFVLFATTNIGYLWYNFIGCAAVLILAPI
                     LQQTLFRGTEAHAAV"
BASE COUNT          799 a          920 c          932 g          722 t
ORIGIN      
        1 agccggtgga cgtcgatctt atttcgtttt gtcggcttgg tattgcttgc cgcggggctg
       61 tcattggtag tcgccgcccg tggtggaaaa ctccttccca gctcagttgg tgttgccagc
      121 gcgaagcaat tgtccgccgc ggcggatacc gaacgcaact ttagtgaaac agttgcactg
      181 acgactaacg cgcttcgatg ggcgccgctc gattgggaac tttacctgga gcgcgcgatc
      241 gcagaggtcg aactcaaaca gactaaaaac gcagtcgatg atttccgccg ggcgcgcttt
      301 ctggaaccta tcgcttatga agttccgctg gccgaaggaa atgcgtggct gccgtacgat
      361 ccagtcttgg ccgtagcagc ctggcgtgag gcgctacgga gagccggacc tctacggccg
      421 caagtctacg caagcatgct gagcgacgct tcgcttagca ttccagaagt cagcccgatt
      481 ctggaggcga ttggactgaa agaacacgat ttagccctgc cctatctcag ccgcatttcc
      541 ggcgatcgtt tcaatcgcgc tctcgcgcaa ctgttgagaa atgatccgga cttacgttcg
      601 ttcggtgaaa cagaaaagct ggcgctcttc gcgttttggt ccgaacgcgg tgaccccgaa
      661 gagatttccc gagccgttga acagcatccc gactggcttc gttatgcctg gcttggcgtg
      721 gagaaataca acgccagcaa gcaggatttt cgcgccggct acgagttgac ccaacgatac
      781 ggtgaacccg tcgcgctgcc gcgagtcacc acaaatttct ctcttcaaga ttcggaaaag
      841 cgcttccaag ccgcgcacga taacttagcc attggttacg aactttatcg tgcgcagatg
      901 cagaacggtc ggattgatga tgcgctcctt accgcccgtc attttagcga acggccgaac
      961 tcgccggcct attttcattt cctggaagcg caatgttggg ccgagaaaca aaattgggag
     1021 cgcgcttgga atgcctggca ggcctttcac accgcgcaga cagcagaagc gaaatagaga
     1081 ctgtcgccct cgccggagga cgcattatcc gcgaccggaa attacgcggc gatacagcgc
     1141 ctcatactga ggaaggatgc gatctgccga gaaccgttcg agcgcgcgat tgcgactgcg
     1201 ttcacccagt tctcgggcca gatccggaga ttcgaccagt gtatccaagc cggcggcagc
     1261 cgcggttaca tcgccgaacg gatatagagg acaagaatct cctatgactt ctggaatgcc
     1321 accgacgcgg aaagcgacga ccggttttcc atagaacatc gtctcaagaa tgctcaggcc
     1381 gaagctttcg tattcggatg tgtagagtcc cgcatccgcg gccctcacat actcgtctac
     1441 tacagctgtg ttttgccgaa caatgacaat gtcccggagt cgcaattcat cgagcagggg
     1501 ttcgtaagga tcaaaagagc cgcctgccat aatgaacaac cgaacgcgtt ctcggttctt
     1561 cgacatcgcg atcgtgcgca gcagtagatc gatgcgcttg acgggtcgca aactcgacat
     1621 gtgctgcaca agaaattcgt cggtgatgcc gagttcgcgc cgaacttcat cgcggcttcg
     1681 tttcggttta ttaggagtga agaaattcgg aatgacttca atcggtcgtt tcagacggaa
     1741 gctctcctgc gtttgatccc gaagactttc ggaaactgcc gttaccgcat cggagtgcac
     1801 gagggcgtgc tcgatggcag tgcgataatc aggatcctgg cccagcagag tggtgtcggt
     1861 tccatgcaac gttgtcacga tgcgcggagc tgacgggcct aacatctgcg aggccagaca
     1921 cgcggcgagt gcgtgtggca ccgcataatg aacatgaaaa agatcgagct gctgggaacg
     1981 cgcaacctcc gtcatcttca ccgcgagcgg cagagtgtaa tccggagatg gaaacaaagg
     2041 gttatgcgca acatcgactc gatgaaaatg aagattgtcc tggggcaggt ccagcctaac
     2101 gggttgagcg taactgaaga agtaaacttc atggccgcgg cgcgccaact ctgaccccag
     2161 tgccgtcgcc aggatcccac ttccaccgat caacggaaaa cacgcgatcc caattttgag
     2221 cggccccgat ttcatcactc ccccgtgtaa gatttgccgg agtcggaaat ttcctcgcgc
     2281 ctgacgaatt ttacctcggg cgcatccgcc ttgttgatgt aatcctgctc gctcgcaccg
     2341 gtgacgtaat gggtgcaccg aatcactgat tgcatccaaa cgaaacgcgt gtctcgagtc
     2401 gggctgattt gctccggacc aaattcgcct ccgggaattt ccagaaaccg atcgccgcct
     2461 ttgtgcagca gcaattttcc gtcgcgataa cgtgcacgaa cgatttctcc ttcatacggc
     2521 tgatcgacga aatagtctga gacggcgaca gcacgcgctc tgaactgggg tgcgcttgag
     2581 cgctccacgc ggacgccgtc tagcaaaccc attcgggtgt acatctcgag acagaaatcg
     2641 gcgacgttcg acgatctcgt tttcttgaaa tgttcaacaa ggggacgcgg tacgtaactt
     2701 ggaagttggc gcgcagtttt ctcgtgccat ttgggaagaa cgcgtttgac atagagcgga
     2761 gaaaactgct tttggatccg attctcgaac tgaaaattca gagctacttc ccggttgctg
     2821 tggtggtctc gcaaaatggt acttgtctcg cgcgggtcat gatcgctgtc gtgacagaaa
     2881 aagacgattt ctccgccgat ctccttttgc aggcggcgag ccgtcacaat tttagcgaat
     2941 aagaatcgct tgggaaaaaa tccgcacggt tgctggccga aacaaataat cggataatcc
     3001 atggctcaga acgagcttca tactgcagcg tgagcttccg tgccgcgaaa gagagtttgc
     3061 tgcaggatcg gcgcgagaat cagtacggcc gcgcacccaa taaaattata ccagaggtaa
     3121 ccgatgttcg ttgtcgcgaa caagacaaac acgagcgttt gtgcgatgag cgcagcaaaa
     3181 aacaccgcgg atccggtgac tcgacgaata aagaaagctg tcaggaaaag accgagaatg
     3241 ctgccgtaga agacagagcc cagaatgttg cctgcttcga tgagattctc gaccaaactc
     3301 acaaatgaag cgacgccgat agcgatcaaa ccccacgccg ctgtcagcgc ctgggccgcg
     3361 actacgtaat gat
//
LOCUS       DATDAJ010000216         8708 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1224504, whole genome shotgun sequence.
ACCESSION   DATDAJ010000216 DATDAJ010000000
VERSION     DATDAJ010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8708
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1224504"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..641)
                     /locus_tag="VIS53_05325"
     CDS             complement(<1..641)
                     /locus_tag="VIS53_05325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767236.1"
                     /translation="MRVSDFDEIDRFETEGLLAGSKERNWLWLGLIVSLAIHFGLCTY
                     FYRTRFASADAAFAQNEQTPTFKVKRVLDSNLDKSSADQINPAAKPNPDNTDLQLPDE
                     KKSFDKLLEEVQASTALPDDMRDVLPDQPKVEQPDVNSVLNEIERSTAQSLSNDPNAA
                     HEQSLLNNSSVSGRPQPALSGTELATSTAIKRPNTFTSKLPGDSAGPTKGRAPG"
     gene            complement(823..1578)
                     /gene="panB"
                     /locus_tag="VIS53_05330"
     CDS             complement(823..1578)
                     /gene="panB"
                     /locus_tag="VIS53_05330"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY5767237.1"
                     /translation="MKDFRQMKQRGEKITALTAYDYPTARLLDESGIDIILVGDSVGM
                     VVLGYQDTTDVTLDEMLHHTRAAARGVNQALLVADMPIHTYDTPKQAVETARKFVDAG
                     AQAVKLEGGVSHVAQIEAITQAGIPFMAHIGMLPQSVREQGGYRIKGRTQSEVEALLA
                     DAHAVEEAGAFSVVLEIVLADVAKQITNAIGIPTIGIGSGEHCDGQILVTHDLIGLFP
                     WFTPKFVSPEARVAEEIRRAARAFVERTRGTAG"
     gene            complement(1741..2241)
                     /gene="folK"
                     /locus_tag="VIS53_05335"
     CDS             complement(1741..2241)
                     /gene="folK"
                     /locus_tag="VIS53_05335"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEY5767238.1"
                     /translation="MRTAVALGSNVGDRLENLRAARKAIFDLPHVSAPIISSSVYETE
                     PVGCEPGAGKFLNAVVEFEYDGDPARLLEQLIQIEKALGRKRDHPQNVSRIIDVDVLY
                     CGKQRINHERLQLPHPRLHLREFVLRPLADIRPDLRLPSQKKTIQELLAEVEESGGVV
                     RYVDTW"
     gene            complement(2299..2982)
                     /locus_tag="VIS53_05340"
     CDS             complement(2299..2982)
                     /locus_tag="VIS53_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HEY5767239.1"
                     /translation="MKEAPVRVLLIGAAGRMGQTVLNLAQGDREIDIAAQCDLGDSIE
                     PAMKNCDVAIDFSQADSIDEICRAASQQGKSLVIGTTGHSQQQRKTIETTADSVPIVL
                     ASNFSVGVNVLFWLTQKTAELLGADLNPEIVETHHKLKKDAPSGTAKTLAEILKAVRN
                     SEIPIQSFREGDVVGEHTVIFAGPSESLELTHRAGNRGIFAGGALRAAKWIVDKQPGL
                     YSMQDVLGL"
     gene            complement(3095..3973)
                     /gene="dapA"
                     /locus_tag="VIS53_05345"
     CDS             complement(3095..3973)
                     /gene="dapA"
                     /locus_tag="VIS53_05345"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEY5767240.1"
                     /translation="MFRGTFTALVTPFRDGGIDVSAFEQLIETQIAAGITGIVAIGTT
                     GESPTLSQEEREQVIRVAVAKANKRCLVLAGTGSNSTQHAIDDTKRAEKLGVDAALLV
                     GPYYNKPSQEGLFRHFKAIADATSLPIMLYNIPGRCGVDILPDTVVRLAKECRNIVSI
                     KEASGSVERVGELRRRLPDAFTILSGDDSLTLPFMAVGAAGVVSVASNLFPSDVCSLV
                     RASEAGDLKLAAKSHRKLLPLFKDLFIEPNPVPVKTALGWRGAMSSEVRLPLCEMSEA
                     NQARLRKTLEEFESKR"
     gene            complement(4068..4868)
                     /gene="dapF"
                     /locus_tag="VIS53_05350"
     CDS             complement(4068..4868)
                     /gene="dapF"
                     /locus_tag="VIS53_05350"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEY5767241.1"
                     /translation="MLRFTKMNGAGNDFILFDNRSGAIDLNRNQIAQLCNRHRGIGAD
                     GILLLEKPTNRADFRMRYFNADGGEAEMCGNGARCFARFANKVGGQAKISFETLAGVI
                     SAELKGDSVTLRMTEPTDLRFNVELPMAAGNKTVHFINSGVPHVVIPVSKIDGADVRR
                     DGAAIRHHKMFSPNGTNVNFIEKRGPNKIAIRTYERGVEDETLACGTGIVASALIFAA
                     SEKSSSPITVLARGGDELQVGFEKVEEGFRNVTLTGPAEFVFEGTIEI"
     gene            5021..5770
                     /locus_tag="VIS53_05355"
     CDS             5021..5770
                     /locus_tag="VIS53_05355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767242.1"
                     /translation="MTNRAAWIAIIVLSLAPQFSFAGDCNDLVLEQVRQMPKGGRYSV
                     SHFAKIRLQSSAHFESGKFFIVPAGPSFCSGATYLVFIRTIEALRERGQLSLDYATLE
                     RLIIRDQHDGEGVWGRWNANGPGTARLFHELRLGRNFDNIDQAKPGDFMKIFWSRQVG
                     RNEHGHSTIFLGTENRPDGQYVRYWSSNIPSGYGEKSVPRSKIAYAIFSRLETPTNLV
                     RITSAPSVDTYLASLLRTRSSISEAGAKCGL"
     gene            5874..6425
                     /locus_tag="VIS53_05360"
     CDS             5874..6425
                     /locus_tag="VIS53_05360"
                     /inference="COORDINATES: protein motif:HMM:NF015674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEY5767243.1"
                     /translation="MLLETLKRHWWIPVLRGVAAIIFGVIAFTHPLMAAATLVLFFGA
                     WVLIDGIFRVVSAITHHASDSDWGFNLIIGILGIIIGLLTFHAPAITALALVIYIAAW
                     AMMVGATEIALAIKMRREIKGEWFLILMGLASIIFAGLLLWNPLAGAAALIWIIAWYA
                     VIMGVLAIIFGLRLRSLPTLAIR"
     gene            6675..>8708
                     /locus_tag="VIS53_05365"
     CDS             6675..>8708
                     /locus_tag="VIS53_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY5767244.1"
                     /translation="MKKAPLTKKTRTQNRPQSNGNGNGLDTGQLLAALMAFKRGDFSA
                     RLPENWTGVPGKIADTFNAVIDANQRMTRELERIGRVVGKEGRIAQRVSIGEVTNCWA
                     DAIGSINNLIGDLVQPTSEMARVIGAVAKGDLSQTMATEIEGRPLKGEFLHTAKTVNA
                     MVGQLGAFASEVTRVAREVGTEGKLGGQAKVKGVAGTWKDLTENVNLMASNLTSQVRN
                     IAAVTTAVANGDLAKKITVDVRGELLELKDTINRMVDQLRSFASEVTRVAVEVGTEGK
                     LGGQAKVEGVSGTWKDLTDSVNSMASNLTSQVRNIAAVTTAVANGDLSKKITVKVKGE
                     ILELKNVINTMVGQLSSFASEVTRVAREVGTEGNLGGQAAVEGVAGTWKDLTDSVNSM
                     ASNLTAQVRNIAGVTTAVAKGDLSKKITVDVRGEILELKDTINTMVDQLRSFGSEVTR
                     VAREVGSEGKLGGQADVRGLAGVWKDLGDNVNVMASNLTTQVRNIAAVTTAVATGDLS
                     KKITVDVKGEILELKDTVNTMVDQLSSFADEVTRVAREVGMEGKLGGQAVVKGVSGTW
                     KDLTDNVNFMASNLTDQVRGIAEVVTAVAKGDLKRKLFLEAKGEIAELAETINNMIDT
                     LATFADQVTTVAREVGVEGKLGGQGNVPGAAGTWRDLTDNVNRLAANLTTQRRA"
BASE COUNT         1889 a         2388 c         2421 g         2010 t
ORIGIN      
        1 cccggtgcgc gtcctttggt tgggccggcg ctatcgccgg gcagcttgct tgtgaaagtg
       61 tttggccgtt tgatcgcagt gcttgtggcc agctccgttc cactaagagc aggctgtgga
      121 cggccggaca ccgagctatt attcagcaaa gattgctcat gcgccgcgtt tggatcattg
      181 gaaagacttt gcgccgtgga acgttcgatc tcgttcagaa cagaattaac gtccggctgt
      241 tccacctttg gttggtcagg caacacgtcg cgcatgtcat ccggcagcgc tgtgctcgct
      301 tgaacttcct ccagcaattt gtcgaatgat ttcttctcat ccggcaattg caggtcggtg
      361 ttgtcagggt ttggtttcgc ggccggattg atttgatcgg cactgctctt atccaggttg
      421 gaatcgagga cgcgcttgac cttgaacgtc ggcgtttgct cgttttgggc gaacgccgcg
      481 tcagcagacg cgaaacgggt gcgataaaaa taggtgcaca gaccgaaatg tatcgccagc
      541 gacacgatta atccgagcca gagccagttg cgctccttgc tacccgccag cagaccttcg
      601 gtctcgaagc ggtcgatctc gtcgaaatcg gatactctca tgcggctgca aacatatcat
      661 agttcaatga cgaagcacga atgccgaagc acgaaggaat cacgaatcta agtcggcagc
      721 cgctgcgcgt ttgtgattcg gtcattcgga tttaattcga cattcgtcat tcggatttcg
      781 tcattgcctg ccatgtcgag cgaagtcgag acatctctga tttcatcccg cagttccacg
      841 tgtccgctcg acgaatgcac gcgcagcccg gcgtatttcc tccgccacac gcgcttcggg
      901 tgacacaaat ttcggggtga accagggaaa caatccaatc aaatcgtgcg tgaccagaat
      961 ttgtccgtcg caatgctcgc ccgagccgat cccgatcgtc gggataccaa tcgcattagt
     1021 gatctgcttc gcgacatcgg ccaggacaat ctcgagcacc acggaaaatg ctccggcctc
     1081 ttccacagcg tgtgcgtccg ccagcaatgc ttcgacttcc gattgcgtgc ggcccttgat
     1141 tcggtagccg ccttgctcgc gcacactttg cgggagcatg ccgatgtgcg ccataaacgg
     1201 tattcccgcc tgtgtgatcg cctcgatctg cgcaacatga ctcacaccgc cttcgagctt
     1261 caccgcctgc gcaccggcat cgacaaattt tctggcagtc tccacagctt gtttcggagt
     1321 gtcgtaagtg tgaatcggca tatccgcgac gagcaacgcc tgattgaccc ccctcgccgc
     1381 cgcgcgcgtg tgatgcaaca tttcgtccag tgttacatcc gtagtgtcct gataacccag
     1441 aactaccatg cctacggagt cgcccacgag gatgatgtcg atgccactct catcgagcaa
     1501 acgcgcggtg ggataatcgt acgccgtgag cgcagtgatc ttctcaccgc gttgcttcat
     1561 ctggcgaaaa tctttcattg cgcttactcg caagatcagc tgcccatttc agaacgcaag
     1621 ccgcggcgaa agcggcgcta cagcgccgta ctccaaaacg caagcgccgg aaacgcgcgt
     1681 gctaggtcgg cgacgttttg gactgcggca gtgctctgcc gcttttagat tttcccacaa
     1741 ctaccaggtg tccacgtagc gaacgacgcc gccagattct tcaacttcag caagcaattc
     1801 ctgaatagtt ttcttctggc ttggcaatcg caagtccggc cggatatcgg ccaggggtcg
     1861 aaggacaaac tctcttaagt gcagccgcgg atgcggcagt tgcaatcgtt cgtggttgat
     1921 tctttgtttg ccgcaataga gcacatcgac atcaatgatt cgcgaaacgt tctgtggatg
     1981 atcccgtttg cggcctaacg ctttctcaat ctgaatcagt tgctcaagca aacgcgcggg
     2041 atcaccgtcg tattcaaatt caacgaccgc attcaaaaat tttccggctc ccggttcgca
     2101 accgaccggt tcagtctcat aaacggacga ggaaataatc ggcgcactta catgtgggag
     2161 atcgaaaatt gcctttcgcg cagcgcgcaa attctcaagt cgatcgccaa cattcgagcc
     2221 gagtgcgact gcggttctca tggtagcgca tgcctcctcg cttgcgttcc aagtctcgca
     2281 acccagaggg tcgcgctact atagccccag cacatcctgc atcgagtaca gtcccggctg
     2341 tttgtccacg atccacttcg ccgcgcgtaa tgcgcctccc gcaaaaattc cgcgatttcc
     2401 tgcgcgatgc gttagctcca aggattcgct gggtcctgcg aaaattacgg tatgctcgcc
     2461 gacaacgtca ccctcgcgaa atgattgaat cggtatttcg ctgtttcgca ccgctttcaa
     2521 aatctccgcc agtgtcttgg ctgttccgct cggcgcgtct tttttcaatt tgtgatgcgt
     2581 ttcgacaatc tccggattca aatccgcgcc gagcaattcc gcagtttttt gcgtcagcca
     2641 aaagagcacg ttgactccga cgctgaaatt cgatgccaac acgatcggta ccgagtccgc
     2701 tgtcgtttca atagtcttgc gttgctgctg agagtggccg gtcgttccaa tgacgagcga
     2761 tttgccctgc tgtgaggccg cccggcagat ttcatcgatg ctgtcggcct gactgaagtc
     2821 gattgccaca tcacaatttt tcatcgccgg ttctattgaa tcgcccagat cgcattgcgc
     2881 ggcgatgtcg atttcccgat cgccctgcgc aagattgagc accgtttggc ccatgcgccc
     2941 agccgcgccg atcaacaaca cacgcacggg agcttccttc atagccgcgc agtttatacg
     3001 ctgtagcgtc cgctgtcctc agcggagttc gcattctatc ttgcacttcg ccctttctgc
     3061 gctgaggaca gcgcacgcta cagaccgatg ccagctatcg cttcgattcg aattcttcga
     3121 gtgttttgcg caggcgcgcc tggttcgctt cgctcatctc gcataacggc aaacgaactt
     3181 cagatgacat cgcgccacgc caaccgagcg ctgtcttcac aggaaccggg ttaggctcga
     3241 taaacaaatc tttgaacagc ggcagcagtt tcctgtgcga tttcgcagcc agtttcaaat
     3301 cgcctgcttc ggaggcgcgc acgaggctgc agacatcaga tggaaacaaa ttcgaggcca
     3361 cgctcacgac accggcagcg cccacggcca taaacgggag ggtgagcgaa tcgtcgccgc
     3421 tcaggatcgt aaacgcatcg ggtaaacggc ggcgcaactc accaacgcgc tccacgctac
     3481 cgcttgcttc tttgatcgac acgatgttgc ggcattcttt ggccagacga accacggtgt
     3541 ctggcaggat gtccacgccg caacgccccg gtatgttgta cagcatgatc ggcagcgacg
     3601 tggcgtcggc gatggctttg aaatggcgga agagtccttc ctggctcggc ttattgtaat
     3661 acggcccaac gagcagcgct gcgtccactc cgagtttttc ggcccgcttc gtatcgtcga
     3721 tggcgtgttg tgtggagttt gaacctgttc ctgcgagcac gaggcaacgt ttgttcgcct
     3781 tggcgaccgc aacacggatc acttgttccc gttcttcttg ggacagcgtt ggtgattcac
     3841 cggtcgtgcc gatcgcgacg atcccagtga tacccgcggc gatttgtgtt tcgatcaatt
     3901 gttcgaatgc agaaacgtca atgccgccat cgcgaaatgg cgtgaccaat gccgtgaatg
     3961 tgccgcgaaa catgtttgct aggccacaga tttacgcggg tgaaacacaa atgagaaaag
     4021 agccaggttc acaatccgtg aacatccgtg ttcatccgtg gctaagttca aatctcgatt
     4081 gttccctcga aaacaaattc cgccggaccg gtgagtgtga cgttgcggaa accttcctcg
     4141 actttctcaa acccgacctg aagttcgtcg ccaccgcgcg ctagcaccgt aatggggctg
     4201 ctgcttttct cactggcggc aaagatcagc gcgctggcaa ctattcccgt cccacacgcg
     4261 agcgtttcgt cttccacgcc gcgttcatag gtgcggatgg cgattttgtt gggtccgcgt
     4321 ttttcgatga agttcacgtt tgtgccgttc ggtgaaaaca ttttgtgatg acgaatcgct
     4381 gcgccgtcgc gtcgcacatc ggcaccatcg attttcgata cggggatcac gacatgcggg
     4441 acgccgctgt tgatgaagtg aacagtcttg tttccagccg ccatgggtaa ctcgacgttg
     4501 aatcgcagat cagtgggctc ggtcattcgt agagttaccg aatcgccttt caattccgcg
     4561 gaaatcacgc cggccagtgt ttcaaaagaa atttttgcct gtccgccgac tttgtttgca
     4621 aagcgtgcga agcagcgcgc gccgttgccg cacatttccg cctcgccacc atcggcgttg
     4681 aaatagcgca ttcgaaaatc cgcgcggttt gttggctttt cgagtaacag gatgccgtcg
     4741 gcgccaatgc cacggtgccg attacataat tgcgcgattt ggttgcgatt caaatcgatg
     4801 gctccactcc tgttatcaaa caggataaaa tcgttcccag cgccattcat tttcgtgaag
     4861 cgcagcatgc acttcgttta gcacacgtcc ggcggcaacg ccaacccgct caaggaatga
     4921 cggcttccca gccgtcaatt ttagtcgacg gctgcccaag ccgtcgttcc ttgttgcgcg
     4981 tgccgttgcg agatcacgtt tcggtgttta cttatccgcc gtgacaaacc gagctgcgtg
     5041 gatcgcgata atcgttctca gtctggcgcc gcagttctcg ttcgctggcg attgcaacga
     5101 cctggttctg gagcaggtca gacaaatgcc gaaaggcggt cgttactctg tttcgcattt
     5161 tgcaaagatt cgcctgcaat cgtcggcaca tttcgagtca gggaaattct ttattgtccc
     5221 ggcggggccg agtttctgtt cgggcgcgac gtatctggtc ttcatcagaa cgatcgaagc
     5281 tttgcgcgaa cgcggtcaac ttagtctgga ctacgccacg cttgaacgct tgatcattcg
     5341 cgaccagcac gatggagaag gcgtttgggg acgatggaac gcgaatggcc cgggcacggc
     5401 gcgtctcttt cacgagctgc ggcttggtcg caatttcgac aacatcgatc aagcgaaacc
     5461 gggtgacttc atgaaaattt tctggtcgcg ccaagtggga agaaacgagc acggacattc
     5521 cacgattttc ctgggaacgg agaatcgccc ggacggtcag tacgttcggt actggtcgag
     5581 caatattccc tccggttacg gtgagaagag tgtgccgcga agcaaaatcg cgtacgccat
     5641 tttttcgcgt ctcgaaacgc cgaccaatct ggtgcgaatc actagcgcgc cttctgttga
     5701 cacgtatttg gcctctcttc tccgaactcg ctccagtatt tcggaggctg gtgcgaagtg
     5761 cgggctatag tggctgccgc taaatgcgtc ggcggccagt ggtgataggc acgcaacacg
     5821 taccgcagcg gaatgcgctt gcctttggaa aggcttgtct ctaaaacggc cgcatgcttc
     5881 ttgaaacctt aaaacgtcat tggtggattc cagttttacg gggtgtcgct gcaattatct
     5941 tcggagtaat tgcgtttacc catccgctta tggctgccgc aactcttgtg ctgttctttg
     6001 gagcctgggt gttgattgac ggtatttttc gcgtcgtaag cgcgattacg catcatgctt
     6061 cggattcgga ttggggattc aatctgatca tcggaattct cggaatcatc atcggcttgc
     6121 ttactttcca cgcgccggca ataaccgcac ttgcgctggt tatttacatc gcagcctggg
     6181 ccatgatggt cggtgcaact gaaattgcgc tggcaatcaa aatgcggcgg gaaattaaag
     6241 gcgagtggtt tcttattctg atgggcctgg cttccataat ttttgcgggt cttctcttgt
     6301 ggaacccgtt ggcgggtgca gcggcgctaa tctggattat cgcctggtac gcagtgataa
     6361 tgggcgttct ggcgatcatt tttggccttc gcttgcgcag cttaccgaca ctggcaatcc
     6421 gttgagcaac ggcgaaacgt cttcagtcct acatccgaag agggcggact gttttgcgtg
     6481 tcgtgaaagc ggtatcgtcc ggtttgcgaa ctttttgtgc gactaaaccc aatgacggcg
     6541 ggtttattga agaaaaatgc ggcctggagc aattaattgg ccgattaccc tacggcgctg
     6601 gaatatgatc gttccaatat cacgcctcga tttcgcgatg gtaggtagaa gaccattttt
     6661 gctaggacca ctctatgaag aaagctcccc ttactaaaaa gacgcgaacg caaaatcgtc
     6721 cgcaaagcaa tggaaatgga aatggtttgg ataccggtca actgcttgcg gcattgatgg
     6781 cgttcaagcg cggcgatttt tccgcgcgac taccggagaa ttggactggc gtgccgggca
     6841 agatcgccga cacattcaat gcggtgatcg acgcgaacca gcgcatgacg cgcgaactgg
     6901 aacgcatcgg gcgagtggtt ggcaaagaag ggcggattgc ccagcgcgtc tcgatcggcg
     6961 aagtgaccaa ctgctgggcg gacgcaattg gatcgatcaa taatctgatt ggggatctcg
     7021 ttcagccgac gagcgaaatg gcgcgagtca tcggggcggt tgccaaggga gatttgtccc
     7081 aaacaatggc aaccgaaatc gaaggccgcc cgttaaaggg tgaatttttg cacactgcca
     7141 aaaccgtaaa cgcaatggtc gggcagctcg gcgcgttcgc atcggaagtg acgcgcgtcg
     7201 cacgcgaagt cggcacggaa ggcaaactcg gtggccaggc aaaagtcaaa ggcgtcgctg
     7261 gtacttggaa ggacttgacg gagaacgtga atctcatggc gtcgaatctc acttcgcagg
     7321 tacgaaacat cgccgcggta accacggccg tggcaaacgg agatcttgca aaaaaaatca
     7381 ctgtcgatgt tcggggggaa ctcctggagt tgaaggacac catcaacagg atggtggacc
     7441 agttgcgttc gtttgcctca gaggtcacgc gcgtcgcggt ggaagtcggc accgaaggaa
     7501 agcttggcgg ccaggcaaaa gtcgaagggg tttcaggcac gtggaaagat ctgaccgact
     7561 cggtgaattc gatggcgtct aatctcacct cgcaagtccg gaacatcgcg gcggtgacaa
     7621 cggccgtggc caacggggat ctctcgaaga agatcacggt caaggttaaa ggcgaaatct
     7681 tggaactgaa aaacgtgatc aacacgatgg tgggtcagct ttcgtccttc gcctcggagg
     7741 tgacgcgcgt ggcgcgggaa gtcggcacgg aaggaaatct tggcggccag gctgctgtcg
     7801 aaggggtcgc gggaacatgg aaggacctca ctgattcagt gaattcaatg gcgtccaatt
     7861 taaccgcgca ggttcgcaat attgcgggtg tcaccaccgc cgtggcaaaa ggggacttgt
     7921 ccaaaaagat caccgttgat gtgcgcggcg aaattctcga actcaaggac accatcaaca
     7981 cgatggtgga ccagctccgc tcattcggat cggaggtgac acgcgtggct cgcgaagtcg
     8041 gctccgaagg caagctgggt ggacaagctg atgtgcgcgg tctggcaggt gtgtggaaag
     8101 acttgggcga caacgtcaat gtcatggcct ctaacctaac gacacaagtg cgcaacatcg
     8161 ctgccgtcac cactgcggtt gccactggcg atcttagcaa gaagatcacc gtggatgtta
     8221 aaggcgaaat tctcgagctg aaagatacgg tcaacacaat ggtggaccaa ctctcctcgt
     8281 ttgccgatga agtcacgcgc gtggcgcgcg aggtcggcat ggaaggcaaa ctcggcggcc
     8341 aggcagtggt gaaaggcgtt tcagggactt ggaaagatct caccgacaac gtcaacttta
     8401 tggcttctaa cctgacggat caggtacgtg gcatcgcaga agtcgtgacc gcagtcgcaa
     8461 agggcgattt gaaacgtaaa cttttcctcg aagccaaagg cgaaatcgcc gagctcgccg
     8521 agacgatcaa caacatgatc gatacgctgg cgacatttgc tgatcaggtc acaactgtcg
     8581 cccgcgaagt gggcgtagaa ggaaaactcg gcggccaggg gaacgtgccg ggcgccgcgg
     8641 ggacatggcg tgatttgacc gataacgtca accgattggc ggcaaatctc acgacccagc
     8701 gtcgcgcc
//
LOCUS       DATDAJ010000217         3743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1235796, whole genome shotgun sequence.
ACCESSION   DATDAJ010000217 DATDAJ010000000
VERSION     DATDAJ010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1235796"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(337..1623)
                     /locus_tag="VIS53_05370"
     CDS             complement(337..1623)
                     /locus_tag="VIS53_05370"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY5767245.1"
                     /translation="MALSPFAIIALVLILARAIAELGLGRLNQRHVRAHAIGVPPAFR
                     GMVDEPTYRRSVDYTLAKSRFGEVVTVFDAVLLIGLLFSGVLPWAFESFTTAFGTSVL
                     AMVGFLFATSVALSVVSLPFAWYAQFKLEDRFGFNTTTMKTWVLDRLKGFLLAVLLGF
                     PLIVLVLKLIEWTGSNWWIWAAAVVIAFQLLLLLIAPVVIMPLFNKFTPLPESSTLRE
                     RLFALARRTDFPTRSIEVMDGSKRSHHSNAFFTGFGRFRKIVLFDTLVAQLAEPELES
                     VLAHEIGHYKKRHIVKLLGVSIFGVFIGFAAVAWLARQEWFYRAFGFEYHADFAAVNV
                     VPAMLLFALLAGTISFWFSPLLHIWSRRFEYEADAFARESMGGAHSLVQALRKLTEKN
                     LSNLTPHPLYSGFYYSHPTLLERERALRAEAEQPCT"
     gene            complement(1623..3086)
                     /locus_tag="VIS53_05375"
     CDS             complement(1623..3086)
                     /locus_tag="VIS53_05375"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY5767246.1"
                     /translation="MLSRREFIRTAALFALAPHAFAKREKEIWVNDVHSQLNRTRVRE
                     LLRPHTRDELAEIVRSASRKGLPISVSGYRHSMGGQQFATDSICVDTRELDRVISFDR
                     ERGLLEAEAGIQWPKLIRAYLNAEAGQTKQWGIAQKQTGADTFTLGGSLSSNVHGRGL
                     RMKPLISNIESFTLINADGKPIRCSRDENSELFRLAIGGYGIFGLIDTVTLRLVPRQK
                     LRRVVEIIPANDLPKRFEERIAQDFLYGDFQFSVDEKSPDFLQRGVFSCYEPISENEP
                     IIAKKVLRDDDWLDLLRLAYTDREKAFKRYSDYYLSTNGQTYWSDTSQLSAYLPNYAL
                     KIRELIGGEESSLIITEIYVPRPALPDFLAKAADLLRSNRTNVIYGTVRLVEKDDESF
                     LAWAKESYACIIFNLLTLHTPSGIEASARSFRGLIDLAIARGGSYYLTYHKFAKPEQV
                     IACYPQFKEFLNLKKKYDPNERFQSDWYRYYRKLFPS"
     gene            complement(3109..>3743)
                     /locus_tag="VIS53_05380"
     CDS             complement(3109..>3743)
                     /locus_tag="VIS53_05380"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY5767247.1"
                     /translation="KKCIRELARSALANGVNQVVILGAGFDPLSSELQREFSTARFWE
                     IDHPATQRHKVRACSKIGIERVHFAALDFAAAGLEREALIKSDFDPAKRTFWIAEGLL
                     MYFPADIVSSLMKILSSLSAPGSEFAFTFMEKQSDGQLRFDSQTKLVDSWLRRRGEPF
                     LWGTTRSELAEFIRPWRVIRFFDHNDLRDVESDLSGEIIAKGEVICLAVI"
BASE COUNT          932 a         1019 c          971 g          821 t
ORIGIN      
        1 cagcgccgta ggcagcccgc acggccttac tgatatcggt ggacgccgcc aacggatgcg
       61 gcagcggccc cggatcgacc agcactagtt cgtgaccgcg cttccttagc tcgatcgcgg
      121 cagtaacgcc attaatcccc gcgccaacaa caatgattct cgacatacgg tgaaagctgt
      181 cattctgagc gaagcgaaga atctctaatc atctggtcca tacggtgcca cggaaataat
      241 cagagatgtt ggaaagcctg gcctcatgct tcgcatttcg ttgcagcgct ccgctcaaca
      301 tgacaacgaa acaagcgacg ttcggtttcg gaagcactaa gtgcatggtt gctcagcctc
      361 tgcgcgcagc gcgcgttccc gctcgagcag ggtggggtgt gagtaataaa aaccgctgta
      421 aagcgggtga ggcgttagat tgctcaggtt tttttcggtc agtttgcgca gtgcttgcac
      481 aagcgagtgc gcccctccca tgctctcgcg tgcgaacgca tccgcttcgt actcgaaacg
      541 gcgcgaccag atgtgaagca gcggcgaaaa ccaaaaactg atcgtccccg ccaacaacgc
      601 aaacagcagc atcgcgggca caacgttcac tgcggcaaaa tccgcgtgat actcgaaacc
      661 gaatgcgcga taaaaccact cctgacgcgc cagccaggcg accgccgcga agccaataaa
      721 cacgccgaag atcgaaacac cgagcaactt cacgatgtgc cgttttttgt aatgcccgat
      781 ttcatgcgca agcacggatt ccagttctgg ttcggcaagc tgggccacga gtgtgtcgaa
      841 aaggacaatt ttacgaaaac gtccgaaccc ggtgaagaag gcgttagagt gatgcgaccg
      901 tttgctgcca tccattactt cgatgctacg ggttggaaaa tcggtgcggc gcgccagggc
      961 aaagaggcgt tctcgcaagg tggagctctc cggcagcggc gtgaacttgt tgaagagcgg
     1021 catgatcacc acaggggcga tcagcagcaa aagcaattgg aacgcgatca cgaccgctgc
     1081 tgcccaaatc caccagtttg agccagtcca ctcgatcagc ttcaacacca gcacaatcaa
     1141 tggaaaccca agcaaaactg cgagcaaaaa tcctttcaga cgatctagca cccacgtctt
     1201 catagtagtc gtgttgaaac cgaatcggtc ttcgagtttg aactgcgcgt accacgcgaa
     1261 tggcaaactg acgacgctta atgcaacgct cgtggcgaaa agaaacccga ccattgccaa
     1321 aacggacgtg ccgaaagctg tcgtgaagct ttcaaacgcc cacggcaaca caccgctaaa
     1381 taacaggccg atgaggagca cggcatcaaa gacggttacg acttctccaa accggctctt
     1441 ggccagggtg tagtcgaccg agcgacgata tgtcggttca tcaaccattc cgcgaaatgc
     1501 aggcggcacc ccaatcgcgt gtgctcgcac gtgccgttga ttcagccggc ccagccccaa
     1561 ctcggcaatg gcgcgtgcga gaatcagaac caatgcaatg atggcaaacg gcgacaaagc
     1621 cattagctcg ggaaaagctt ccgataatag cgataccaat cactttgaaa ccgctcattc
     1681 ggatcgtatt ttttcttcaa attcagaaat tctttgaatt gcggatagca cgcgatgacc
     1741 tgctctggct tcgcaaattt atggtaggtc aagtaataac ttccgccgcg agcgatcgcg
     1801 agatcaatga gtccgcgaaa cgagcgcgcc gaggcttcga tgccactcgg tgtatggagc
     1861 gtgagcaaat tgaaaatgat acaggcatag gattctttgg cccatgcaag aaagctctcg
     1921 tcatcttttt ccaccaatcg gacggtgccg tagatgacgt ttgtgcgatt cgatcgcaac
     1981 aaatctgctg cctttgctaa aaaatcggga agggctgggc gcggaacata gatttcggtg
     2041 atgatgaggc tcgattcctc gccgccgatt agctccctaa ttttcagtgc gtaattcggt
     2101 agataggcgc tgagttgact tgtatccgac cagtaagtct gcccgtttgt cgacaaatag
     2161 taatcgctgt agcgcttgaa agccttttcc cgatctgtgt aagcaaggcg caagaggtct
     2221 agccagtcgt catcgcgtaa taccttttta gcgataatcg gttcgttttc gctgatcggt
     2281 tcgtagcagg aaaacacccc gcgttgaagg aagtccggag atttctcatc cactgaaaat
     2341 tgaaaatcgc cgtagagaaa gtcttgcgcg atgcgttctt caaaccgttt gggcaaatcg
     2401 tttgcgggaa ttatttcgac tacgcgccgt aatttttgcc gcggaacgag ccgaagcgtt
     2461 acggtgtcta tcaatccaaa aatcccgtag ccaccgattg caagtcggaa caactcacta
     2521 ttttcatcac gcgagcagcg aatcggtttt ccatcggcat tgatcagcgt gaatgattcg
     2581 atgttggaga tcagcggctt catccgcagt ccgcggccgt gcacgttgga ggaaagactc
     2641 ccaccgagtg tgaatgtgtc ggcaccggtt tgtttctgtg cgatgcccca ttgctttgtc
     2701 tggcccgctt cagcattcag atacgcgcga atcaatttcg gccattggat accagcttct
     2761 gcttcgagca aaccgcgttc acgatcgaac gaaatcacgc gatccaactc gcgcgtatcg
     2821 acgcaaatgc tatccgtggc gaattgctgg ccgcccatcg aatgccggta tcccgaaacg
     2881 gaaatcggca agccctttcg cgacgcggaa cgaacaatct cggcaagttc gtctctggtg
     2941 tgcggtctta aaagttcgcg aacccgagtg cgattgagtt gcgaatggac gtcattaacc
     3001 caaatctctt tctcgcgttt cgcgaacgcg tgcggcgcaa gcgcaaaaag cgccgccgtg
     3061 cgtatgaatt cacggcggct cagcatcgcc gaagcttaac tgcgcaagtt agattacagc
     3121 cagacaaatt acctcgcctt ttgcgatgat ttcaccactg agatccgatt ccacgtctcg
     3181 cagatcattg tgatcgaaaa atcgaatcac gcgccacggc cgtatgaact cagcgagttc
     3241 gcttcgcgta gtcccccaga ggaacggctc gccgcgtctg cgtaaccacg agtcaacaag
     3301 tttggtttgc gaatcgaagc gaagttggcc atcgctctgt ttttccatga acgtaaatgc
     3361 aaactcgcta ccgggggcac ttaggctgct caagattttc atcaaggagg agacgatgtc
     3421 tgccgggaaa tacatcagta aaccttcggc aatccagaat gtgcgtttag ccggatcgaa
     3481 gtcgcttttg atcagcgctt ctctttcgag accggcggca gcgaaatcaa gtgcggcaaa
     3541 atgcactcgt tcaattccga ttttggaaca ggcacgcact ttgtgacgct gcgtagccgg
     3601 atgatcgatc tcccaaaatc gcgcagttga aaactcccgc tgcaattcgg aactgagcgg
     3661 atcaaagcct gcgccgagta tgacgacttg gttaaccccg ttagcaagtg ctgagcgtgc
     3721 cagttctctg atgcatttct ttc
//
LOCUS       DATDAJ010000218         3896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1243880, whole genome shotgun sequence.
ACCESSION   DATDAJ010000218 DATDAJ010000000
VERSION     DATDAJ010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3896
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243880"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..906)
                     /locus_tag="VIS53_05385"
     CDS             complement(133..906)
                     /locus_tag="VIS53_05385"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF013509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEY5767248.1"
                     /translation="MKRFIVFVSASLLAFPLFGQEKSPQLKDQKDKVSYSIGMQIGFN
                     LGRQKVDINPDILAAGIKDAIAGKPQLTTDQVKDIMGQFEKDMEAKQKQLGEKNKTDG
                     TKFLEENKKKAGVKTTASGLQYKVEKEGTGAQPKATDMVTVNYRGTLIDGTEFDSSYK
                     RGQPATFPVNGVIKGWTEALQLMKQGAKYQLFIPSTLAYGERAMGPDIGPNSTLIFDV
                     ELQDVKPPPTPGPQGSPNVAVPQGSPKVPPPPSPAPTKK"
     gene            1036..1812
                     /locus_tag="VIS53_05390"
     CDS             1036..1812
                     /locus_tag="VIS53_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767249.1"
                     /translation="MVATGLITLWPGLAQALTLSHSDALKIGKRVWQNECGGTISGLT
                     SWNQGEGFASLGIGHFIWYPKGRRGPFEESFPKLVSFVANRGAKLPTLLLGVGRGQPC
                     PWNSRAEFLQAQNTGEMNQLRRFLADTVDLQAEFLVARLEASLPKMLAEAAPADRTNV
                     KTQFERLTKTPQGCYALIDYVNFKGEGVLHTERYHGQGWGLLQVLEAMHGNSDSGAPD
                     EFARAAKAVLTRRIQNAPADRHESRWLTGWLRRVNSYSGG"
     gene            1943..2446
                     /locus_tag="VIS53_05395"
     CDS             1943..2446
                     /locus_tag="VIS53_05395"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY5767250.1"
                     /translation="MRKASAYISRQEPLKVNQSLLKQATPDNVHVVVSLPKQRAYLMI
                     GEQIVADSPISSGKTGHSTPRGNFSVMEKDPDHRSSIYGDFVDGSGRVVRAGISARID
                     SAPSGTHYVGAPMRWFMRLTGEGVGMHIGILPGYPASHGCIRMPPDGAKLFYDTVRVG
                     TPVKVGD"
     gene            complement(2512..3750)
                     /locus_tag="VIS53_05400"
     CDS             complement(2512..3750)
                     /locus_tag="VIS53_05400"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidohydrolase family
                     protein"
                     /protein_id="HEY5767251.1"
                     /translation="MRAILINTGTELLLGDVQDAHLAFIAREILPLGLRIDERRTVPD
                     SDVIRRTLTELFPHCEILFVTGGLGPTTDDITREMVAESLGLELYQDPQLLTWLQQRL
                     QARGIKWTSGIARQADVLAGARVLPNENGSASGFYLKANINPRIPSPHLFVLPGPPRE
                     LQPMFKKFAMQILKSIVEVPLPVERRSYSIAGMGESLVEKAIGEKVLAIPGIELGYCA
                     RPGEVEVRVIGQPNAIETADSIIRDELGISIFSDNHEALEAVVVRLLKQRHQTLATAE
                     SCTGGLIANKITNVSGASEVFLAGYVTYANSAKSDVLNVYSKLIDKHGAVSETVARAM
                     AEGARARAACNYGLATTGVAGPTGGSEEKPVGTVYIALASGDSETLARKFVFPTDRET
                     FKQLAAQAALDLLRRKLLKE"
BASE COUNT          834 a         1074 c         1080 g          908 t
ORIGIN      
        1 catcgcgaca aacgcgcctt ctacagcttg gaaggtttgt ggggcgatgc ctcggtgctg
       61 cagtgggaat caattctcaa ggagtgacgg cttgccagcc gttacctcta ctccttgagc
      121 gtcgcgtcag cgctacttct tagttggcgc cggtgacggc ggaggaggaa ccttcggaga
      181 accctgtgga accgcaacgt tcggagaacc ctgtggacca ggggtgggag gcggtttcac
      241 atcctgcaat tcgacatcaa aaatcagggt cgagttcgga ccaatgtccg ggcccattgc
      301 ccgctcgcca tacgcgaggg tcgagggaat gaacaactga tactttgctc cctgcttcat
      361 cagttgaagc gcttcggtcc agcctttgat cactccgtta accggaaagg tcgccggctg
      421 gccgcgcttg tacgaactgt caaactccgt cccatcgatc agagtgcccc gataattcac
      481 ggtaaccatg tcggtggctt tgggctgcgc tcccgttcct tctttctcga ccttgtactg
      541 caaaccgctc gcagtcgttt tcacgccggc tttcttcttg ttctcttcga gaaacttcgt
      601 gccgtcggtt ttgttttttt cgcctagttg tttctgtttc gcctccatgt ctttttcgaa
      661 ttggcccatg atgtccttaa cctggtcggt cgtcagttgc ggtttgccgg caatagcgtc
      721 tttaattccg gcggccagga tatcagggtt aatgtccact ttttgccggc cgagattaaa
      781 tccgatctgc atgccgatgc tgtagctgac cttgtccttt tggtctttga gctgtggtga
      841 tttttcttgc ccgaacaacg ggaatgcaag taaggaagcg ctgacaaata caataaaacg
      901 tttcatagga tcgtgtttcc gcgtcgtttt aatttaaggt tggtcgccgc agaaagccgc
      961 acgctaatgg ataaatgccg cacgtcaaga aaacagcttt gccatcgatt cgggggggcc
     1021 ggcttgccat ttacagtggt agccaccgga ctgattacgc tctggccggg actggcgcag
     1081 gccctcacgc tctcgcacag cgatgctttg aaaattggga aacgagtctg gcaaaatgag
     1141 tgtggtggaa caatttcggg actgacttca tggaatcaag gcgaaggttt cgcatcgctc
     1201 ggcatcggcc attttatctg gtatccaaag ggacggcgag gcccgttcga agagagtttc
     1261 ccgaagctgg taagcttcgt agcaaatcgc ggcgcgaagt taccgacatt acttctgggg
     1321 gtcggacgcg gacagccgtg cccgtggaat tcgcgtgccg agttcttgca agcgcaaaat
     1381 acaggtgaaa tgaaccagtt gcggcggttt ctggccgaca ccgtcgatct ccaggcagaa
     1441 tttcttgttg ccagattgga agcttctctg cctaagatgc tggccgaagc ggcgcctgcc
     1501 gaccgaacta acgtgaagac acaatttgaa cgcctgacga aaacaccaca ggggtgctac
     1561 gccctcatcg attacgtcaa cttcaaagga gaaggcgttt tgcacacgga gcgttaccac
     1621 ggacagggat ggggcttgct tcaggtgctg gaagcgatgc acgggaattc ggattcaggc
     1681 gcgcctgatg aattcgcgcg cgcggcgaaa gccgtcttga cgcgccgcat ccagaatgct
     1741 cctgccgacc gccatgaatc acgttggtta acgggttggc ttcggcgcgt aaacagctac
     1801 agtggcggct aataaattta tgccgggagc acttcgcaca cttctttgcg cgcttttgtt
     1861 gacggctctt gcctcgtcaa ttagcgccca gttccgcctt ttcggaccaa gatcaccaaa
     1921 gccggcgccg caaccaaggc agatgcgcaa agcgtcggct tacattagcc gccaggaacc
     1981 gctgaaggta aatcaatctt tgcttaaaca ggcgacgccg gacaacgttc acgttgttgt
     2041 ttcccttccc aagcagcgcg cctacttgat gatcggcgag caaatcgtgg ccgacagtcc
     2101 gatctcttcc ggcaagaccg gacacagcac gccccgcggt aatttctccg ttatggaaaa
     2161 ggatccggac catcgttcca gtatctatgg cgacttcgtc gacggctctg gtcgggttgt
     2221 tcgcgccggc atcagcgcca ggatcgattc cgcgccgagc ggaacacatt atgtcggtgc
     2281 gccaatgagg tggttcatgc ggctaacagg cgaaggggtc ggaatgcata tagggatttt
     2341 gcccgggtat cctgcatccc acggatgcat tcggatgccg ccggatggag caaagttatt
     2401 ttacgatacc gtaagagtcg gcaccccggt gaaagtgggc gattaactaa tttcctacgc
     2461 tcaggagcgc aacgggaact ggggtcttaa atcgtgacgg ctgaaaagcc atcattcctt
     2521 gagtaatttc cgtcgcaaaa gatcgagtgc cgcttgggcg gctaattgct tgaatgtctc
     2581 gcggtccgtt gggaaaacga atttccttgc tagagtttct gaatctcctg aagccagcgc
     2641 gatgtaaacc gttccaaccg gcttttcctc cgagccgccc gttggtcccg ctacgccagt
     2701 ggtagcgaga ccgtaattgc acgccgctcg tgcgcgcgcg ccttcggcca tcgcgcgcgc
     2761 aaccgtttca ctcaccgcgc cgtgcttgtc gatcaacttc gaatagacat tcaagacgtc
     2821 gctctttgct gagttcgcat aggtgacata tcccgcgagg aaaacttccg atgcacccga
     2881 cacgttggta atcttgtttg cgattaaacc gccagtgcac gattctgcag ttgccagggt
     2941 ttgatgccgt tgcttcagca gtctcacgac gactgcttca agcgcttcgt ggttgtccga
     3001 gaaaatcgag atgcccaatt cgtcgcgaat gatggaatcg gcggtttcaa tcgcgttcgg
     3061 ttgcccaatg acgcgcacct cgacttcgcc tggtcgcgcg caatagccca gctcgatccc
     3121 tgggatcgcc aaaacttttt cgccaatcgc tttctcaacc agcgattcgc ccatgccggc
     3181 aatgctatag gatcggcgct cgactggaag cggcacctcc acaatcgatt tcagaatctg
     3241 catcgcgaat ttcttgaaca tgggctgaag ctctcgaggg ggacccggca aaacgaacag
     3301 gtgcggcgac ggaatgcgcg gattgatgtt cgccttcaaa taaaaacccg aggcgcttcc
     3361 gttctcgttt ggaaggacgc gcgcaccggc gaggacatcc gcctgtcgcg caatacccga
     3421 agtccatttg attccgcgcg cttgcagcct ctgttgaagc caagtcagca gttgcgggtc
     3481 ctgatacagc tccaagccta gcgattcagc aaccatctct cgagtgatat cgtctgtggt
     3541 tggaccgaga ccgccggtga caaacagaat ttcgcaatgc ggaaataatt cagtgagtgt
     3601 gcggcggatc acgtcgctat cggggaccgt tcggcgctcg tcgattcgta agcccaacgg
     3661 aaggatctcg cgcgctataa acgcaagatg cgcgtcctga acgtcaccga gcaaaagttc
     3721 ggtaccggtg ttaatgagaa tcgcgcgcat ggaaaataag gcaaaacatc gaacatcgaa
     3781 gatcgaacgt ccaatgttgt agccgcggcg ctgcgtcgcc gcgaaagtgc ctggcgcctc
     3841 gacaaagcga ggcggctaca cctacgccgc tgtcttgtcc tgtttcttgc gaatca
//
LOCUS       DATDAJ010000219         3662 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1244347, whole genome shotgun sequence.
ACCESSION   DATDAJ010000219 DATDAJ010000000
VERSION     DATDAJ010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3662
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1244347"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..976
                     /locus_tag="VIS53_05405"
     CDS             <1..976
                     /locus_tag="VIS53_05405"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY5767252.1"
                     /translation="YKTSPAHSDAASHPSANLSKGYSAVFATVFIWSVPSLFMFYLNR
                     YYDPWAQNFYRYSVACIAIAPLLLYQIRRGGPRISMHAVKLCLLPCLPNVVHQVTQVM
                     ALFYIGPGVYTIFTRASVIFTALLVLAFFPEERVVIRQWQFQLGTLLGLIGAFGVIWF
                     QANANTHDEHIALPGLFIAFTATFCWALYGVLIKRPSAELGSIRSFGIVSFITSALLF
                     PLTLAFGKIGAPLQAGVEANLILIISAVTCITLAHVLYYVAIREIGVALSQSLQLLCP
                     AIAMALSAWLFGERLTQAQLWSAGILLMGAFLAMRTKPIATAETAENI"
     gene            1070..1954
                     /locus_tag="VIS53_05410"
     CDS             1070..1954
                     /locus_tag="VIS53_05410"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HEY5767253.1"
                     /translation="MNLKDYLITRQKLIDRALDRYLPKANTRPTTLHRAMRYSLFAGG
                     KRLRPILCLAAAEACRGKINDALPLACALECIHTYSLVHDDLPSMDNDDFRRGRPTCH
                     KVFGEGIAVLAGDALLTIAFEIVSHAKPRPRYGMSMLLREVAVAAGSQKLIAGQVADL
                     EAEGKNVKRRELQFIHENKTAAILRSSVRLGAMSANGDARKLSAITRFGERLGLAFQI
                     IDDILDVTQTSEILGKSAGKDVAAKKATYPAVIGLEKSRAEAKRLTREAHNALSIFSD
                     RDAETLHALANYLLEREY"
     gene            complement(2024..3079)
                     /gene="tsaD"
                     /locus_tag="VIS53_05415"
     CDS             complement(2024..3079)
                     /gene="tsaD"
                     /locus_tag="VIS53_05415"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEY5767254.1"
                     /translation="MTVLALETSCDETAVAILRGDHSGHELLASEVASQVAAHEKYGG
                     IVPEIASRNHLIYAPRLLDRAASAAKTRLSEIDAFAATSGPGLASSLMIGASIAKGLA
                     IGFGKRYLGINHLEGHLLSPIFGIEKDGDNGIKPNVSLIVSGGHTMLVVVRGLTDYQL
                     IGHTVDDAAGEAFDKVAKMLGLGYPGGPEIEKHARGGDPKRFDFPRSMLGSENFSFSG
                     LKTAVRYLLPKIRPTEEWRLTQTPYNLDEQTLRDLCASFQQAIIDVLVTKTIAAAQKY
                     RVDLVTISGGVSCNQELRRQMREASSRKGIEFKSAEPWLCTDNAAMIAFAALLRLRAG
                     FESHVTEEIDPNLALAL"
     gene            complement(3165..>3662)
                     /locus_tag="VIS53_05420"
     CDS             complement(3165..>3662)
                     /locus_tag="VIS53_05420"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5767255.1"
                     /translation="VSTQGRVPSQQHDYSTSAVSKARPNFPMVLLINEGSASGAEIVA
                     GALKDLRRAVLVGETTFGKGSVQNVLQLPDGSAVRFTTAKYYTPSRQVIQGNGVTPNI
                     RVGMTAEQERALYALRNTVNVKPEDETNIIKTKDPQMLRAIDALKGVMIYAQQSAPKA
                     EAVKK"
BASE COUNT          771 a         1039 c          979 g          873 t
ORIGIN      
        1 ctataaaacg tcgcccgccc atagcgacgc tgcatcgcac ccgagtgcca atctctcgaa
       61 agggtactcc gcagtttttg ctacggtgtt catctggtcg gtgccgtcgc ttttcatgtt
      121 ttacctgaac cggtattacg atccgtgggc gcaaaatttc tatcgctact cggtggcatg
      181 catcgctatt gcgccgttat tactttatca aattcgtcgc ggtggcccac gcatcagtat
      241 gcacgcggtg aaactttgtt tgctgccatg cttgccaaac gtggtccacc aagtcaccca
      301 ggtaatggcg cttttctata ttggccccgg cgtgtatacg attttcaccc gggcttcagt
      361 cattttcact gctcttctgg tgctggcatt ctttccagag gaacgcgtcg tcatccggca
      421 atggcaattc cagcttggga cattgctcgg attgatcggc gcattcggcg tgatctggtt
      481 tcaggccaat gcgaatacgc atgatgagca catcgcgctg cccgggttgt tcattgcctt
      541 tacggccacg ttctgctggg cgctttacgg agtcctgatt aaacgcccgt cagccgagct
      601 tggatcgatc cgcagcttcg ggatcgtcag tttcatcact tcggcgctgc tgtttcccct
      661 cacgctcgcc ttcggcaaaa tcggagctcc gttgcaggcc ggcgtggaag cgaacctgat
      721 tctcatcatc tcggccgtaa cctgtattac gcttgctcac gttttgtatt acgtcgcgat
      781 tcgggaaatc ggcgtcgcgc tttctcaaag cctccaacta ctctgtccag cgatcgcgat
      841 ggcgctgtca gcctggctct ttggcgaacg actcacgcag gcgcagcttt ggagcgccgg
      901 cattctgctt atgggtgcct tccttgcaat gcgaaccaag cccatcgcca cagcagaaac
      961 agctgaaaat atttgaaggc tgcgagtgga tgcttgacgc tggacagtct gcgcgaggtt
     1021 ggattatcga gtatcaagaa tccagcaatt cagcagccgt ttttgtcacg tgaatctcaa
     1081 agactatctc atcactcgcc agaagctgat cgaccgcgcg ttggaccgct atttgccgaa
     1141 agcgaatacg aggcccacaa cgcttcaccg ggctatgcgc tacagtttgt ttgccggcgg
     1201 caaacgtttg cggccgattc tgtgtctggc tgcggctgaa gcttgtcgag ggaagatcaa
     1261 tgatgcgctt ccactggcgt gcgcgcttga atgcatccac acgtactcac tggtgcacga
     1321 tgatcttccg agcatggata acgatgattt ccggcgcggt cgtcccacct gccacaaggt
     1381 tttcggcgaa ggcatcgccg tgctcgcggg tgacgctcta ttaaccatcg ccttcgaaat
     1441 tgtttcgcat gcaaagccga ggccacgcta cggtatgtca atgctgttgc gcgaggttgc
     1501 cgtcgcggca ggcagccaaa aactgatcgc cggccaagtc gccgatctcg aagccgaggg
     1561 taaaaacgtc aaacgccgcg agttgcagtt tattcacgag aacaagaccg cggcgatttt
     1621 gagaagctca gtgcgtctgg gggcgatgag tgccaacgga gacgctagaa agctttccgc
     1681 aatcacacgc ttcggggaac gactggggct cgctttccaa atcatcgacg acattctcga
     1741 cgtaacgcag acctccgaaa ttttgggcaa aagcgccggc aaagatgtgg cggcaaagaa
     1801 ggcaacttac cctgcggtca ttggcttgga gaaatcacgc gcagaagcca aacggctcac
     1861 gcgtgaagca cacaatgcgt tgtcgatttt cagtgatcgc gacgctgaaa cgctgcatgc
     1921 gctagcgaat tatctgctcg agcgcgagta ctgattctgt agccgtcgcc ctgtgggcga
     1981 cgccgtaaca gacggatgca gaacgcttcg cacagcgaag cggctacaag gcgagtgcca
     2041 aatttggatc gatctcctcg gtcacgtgcg attcaaatcc agcccgcaat cgcaacaacg
     2101 cggcaaaagc gatcatggcg gcattatcgg tgcacaacca cggttcggcg cttttgaatt
     2161 cgattccttt gcggctgctc gcctcgcgca tttggcggcg taactcctga ttgcaactga
     2221 cgccgccgct tatcgtcacg agatccacac gatacttttg cgccgccgcg attgtctttg
     2281 tcaccagcac gtcaatgatt gcctgctgaa aagatgcgca aagatcgcgc agcgtttgct
     2341 catccaaatt gtagggcgtc tgtgtcagac gccattcctc agtcggtcta atttttggca
     2401 acaagtaccg caccgcagtc tttaatccgc taaagctgaa attctccgag ccgagcatgc
     2461 tgcggggaaa atcaaaacgt ttcggatcgc cgcctcgcgc atgcttttca atttccgggc
     2521 cgccgggata accaagtccg agcattttgg ctactttgtc gaatgcctcg cccgcagcat
     2581 cgtcaacggt gtggccgatg agttgatagt ccgttaggcc acgaacgacg accagcatcg
     2641 tgtgtccgcc actaacgatt agcgatacat ttggcttgat gccgttgtcg ccgtcttttt
     2701 cgatgccaaa aattggcgag agcaaatgtc cttcgagatg attgataccc aggtaccgtt
     2761 tgccgaagcc gattgccaat cctttcgcaa ttgacgcacc gatcattaac gaactcgcca
     2821 gaccggggcc actggtggca gcgaacgcat cgatttctga taaccgggtt ttcgctgcgc
     2881 tcgcagcgcg atcgagtagc cgcggcgcgt agatcaaatg attgcgcgac gcgatctccg
     2941 gtacgatccc gccgtatttc tcatgagcag cgacctgtga tgcgacttcg ctcgcaagca
     3001 actcgtggcc ggaatggtcg ccgcgcaaaa tcgctactgc cgtctcgtca caggaggttt
     3061 cgagagctaa tactgtcatg tcgagcgaag tcgagacatc ctgttgcgag atcgactggc
     3121 aattccgcgg gatttctcga ctccactcgg aatgacagga actgctattt ctttaccgct
     3181 tccgctttcg gcgcgctttg ctgtgcgtag atcatcacgc ctttgagtgc gtcgatggcg
     3241 cgcaacatct gtggatcttt ggtcttgatg atgttggtct cgtcttctgg cttaacattc
     3301 actgtgttgc gcagcgcata gagagcgcgc tcctgttcgg cggtcatacc gacgcgaata
     3361 ttcggcgtca cgccattacc ctgaatgacc tgtctgctgg gcgtgtagta cttggcggtg
     3421 gtaaaacgca ccgcggatcc atccggcaat tggagcacat tctgcacgga accttttcca
     3481 aaagtggttt caccaacaag gaccgcccga cgcaaatcct taagagcgcc ggcaacgatc
     3541 tccgcaccgc tcgcgctgcc ttcgttaatc agcaacacca tcggaaaatt cggacgggcc
     3601 ttacttacgg cggaagtaga gtaatcgtgc tgttgagaag gcaccctgcc ctgcgtcgaa
     3661 ac
//
LOCUS       DATDAJ010000220         3668 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1257390, whole genome shotgun sequence.
ACCESSION   DATDAJ010000220 DATDAJ010000000
VERSION     DATDAJ010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3668
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257390"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VIS53_05425"
     CDS             complement(<1..652)
                     /locus_tag="VIS53_05425"
                     /inference="COORDINATES: protein motif:HMM:NF021436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HEY5767256.1"
                     /translation="MFVAGSRTNRNEHLLILLLCVAAAVRVFIFSAAFPFFSNIDEDL
                     HFDLVTQYSHAQVPRSFDRLKEETLNWIVPYASPEFLSPPERFPDGKFPAPLWKQPWS
                     KVEPEIAATRSAWSSEINFESSQPPLYYTLAALWWWIGKQIGLIGIQSMYWIRFLNAA
                     LMAIVVWLGYVAARTIAPERLDLRIGVPLLLAFIPQNVFYAMNNDVLSPLCFGVLFL"
     gene            complement(910..1524)
                     /locus_tag="VIS53_05430"
     CDS             complement(910..1524)
                     /locus_tag="VIS53_05430"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY5767257.1"
                     /translation="MNTKLLLTALTSLIGTAVFAADAPAVGGAAPDFSLPDAKGKTHS
                     LSQYKGKYVVLEWFNPQCPFVKKHYGGGNMQNLQKEFTDKGVVWLTIDSNAPGTEGNL
                     TPDEAQKIATSWKTHETALLLDPEGNAGRAYGAKNTPNMVIINPEGKIIYRGAIDSKA
                     TPNPSDIPSSTNYVKAALEQSLSGKSVATPETKPYGCSVKYKSS"
     gene            complement(1628..>3668)
                     /locus_tag="VIS53_05435"
     CDS             complement(1628..>3668)
                     /locus_tag="VIS53_05435"
                     /inference="COORDINATES: protein motif:HMM:NF014713.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEY5767258.1"
                     /translation="LADTTAIVPGKSFTVGLLLRMAPGWHTYWKFSGDAGLPTELKWK
                     LPPGWKVGEIQWPIPLKTIDPGDIETYGYENEVLLMQEITPPGKIDSSSANLPAEANW
                     LVCEKICIPGSATLQLDLPVASTSQPANTDVFARYRRLVSQNLPGPDVARVDWSRVGS
                     DLRLKITSETLAKYRAVDFFALPEQETIVGHPEVQSRNNNEIVFRVPLESAPKDLSSM
                     AGLVVFAQQPNGDDRAAWQITTGPAGAQTGLSASLSARPAPARGIFTFLLFGFLGGLI
                     LNLMPCVLPVISLKIFGFVQQAGQSRRKILRSGIAFIIGIFAWFIALAILLIALKGAG
                     RDVTWGGFQFTNPYFVLALSVIVLVFALNLFGVFEVSLPQSVTRNLLSTSDRKDLLGS
                     FFQGVFATVLATPCTAPFLGTALGFAFTQSAAIILAMFVAIAAGMSAPYLLLSAQPAW
                     LRFLPRPGPWMLHVKQFMGFLLLATLLFLLYVVGAQRGLEGAIWASCFLLVISVACWM
                     KGAFVVPTAPAVKRIVVLALMLLLVIGSGVYFIGDKFQSAKIASVDSQIQGDWQRFTP
                     ERLQTELEQGRTVFVDFTAAWCLTCKFNEASVLEAQDVREAFQRHGIVKLKADWTNGD
                     PVITKLLQHFGRPGVPLYVLYPAKNEEPIVFPEVLTKRMVLDKLESAARRVASQY"
BASE COUNT          891 a         1031 c          987 g          759 t
ORIGIN      
        1 aaagaaacag cacaccgaaa cacagcggtg agaggacatc gttgttcatc gcgtagaaca
       61 cattttgagg gatgaaagcc agcaacagcg gcacgccaat ccgcaggtcg aggcgctccg
      121 gcgcgatggt tcgcgcggcc acataaccca accaaacgac gatcgccatg agcgcggcat
      181 tcaggaaccg aatccagtac atcgattgaa tgccgatcaa tccaatctgc ttcccaatcc
      241 accaccacag cgccgcaaga gtgtaataca gcggcggctg agatgattcg aaattgattt
      301 cgctgctcca ggccgatctt gtcgctgcaa tctccggttc cactttcgac cacggttgtt
      361 tccatagggg cgccgggaat ttcccatctg gaaaacgctc cggcggagac aggaactccg
      421 gcgaagcgta aggaacaatc cagttcagag tttcttcctt cagccgatca aaactgcgcg
      481 ggacctgcgc atgcgaatac tgggtgacca gatcgaaatg caggtcctca tcaatgttgc
      541 tgaagaacgg gaatgctgct gagaaaatga aaacacggac tgcagcggcg acgcagagca
      601 gcaaaatgag aaggtgctca ttgcgattcg ttcttgatcc ggcaacgaac ataagaatcg
      661 cctgtcaaag acgggacacc gtgaacggtt ccacgttaca tcgcgagcgc aaaagcgacg
      721 cgaggacgcg tgcgcactcg aaaagctttc gcgaaacgtg gcaagccttg ttcgattttg
      781 cacgaagtgc tttgggagtg cgatgcgtcc tcgcatcgct ttcattcccc cggacgtgca
      841 gaaaagaaaa gcggcggtcg cattcagacc gccgctctga aactttcgat cctgccagag
      901 cagggaatgc tacgaggatt tgtatttaac cgagcaaccg tatggcttcg tctctggtgt
      961 cgcgacggac ttgcctgaca acgattgctc cagcgccgcc ttcacgtagt tggtagagct
     1021 cgggatgtcg gatgggtttg gcgtagcttt gctgtcaatt gcgccgcggt aaatgatttt
     1081 cccttctgga ttgatgatca ccatattcgg cgtgtttttc gccccgtaag cgcgacctgc
     1141 gttgccttcg ggatccagca gcagcgcggt ctcatgcgtc ttccacgatg tcgcgatctt
     1201 ttgcgcctcg tccggcgtca gatttccctc tgtgcccggt gcattggaat cgatggtcag
     1261 ccagacaacg cctttgtccg tgaactcctt ctgtaggttc tgcatgttgc cgccgccgta
     1321 atgctttttc acgaacgggc actgtggatt aaaccattca agcacgacgt acttgccctt
     1381 gtactgcgac agcgaatgcg tcttgccttt cgcgtctggg agcgaaaaat ccggtgcggc
     1441 acctccaacc gccggcgcat cagcggcaaa gacagcggtt ccgatcaatg atgtaagggc
     1501 ggttaagagt agtttcgtgt tcatatgagt aattagaaaa cagaattgct gagacgttta
     1561 atgttcttgg gtaaaacaat cgtcggggcc tgaacaattt aacgtgaagc gcctcgattc
     1621 cagcgcttta atattgcgag gcgacgcggc gcgcggcact ttcaagcttg tccaggacca
     1681 tccttttggt gagcacttcc ggaaaaacaa tcggctcttc attcttcgcg ggataaagca
     1741 cgtaaagtgg aacacccggg cggccaaaat gctgcaataa ctttgtgatc acgggatcgc
     1801 cgttggtcca atcggctttc aatttcacaa tcccgtggcg ctggaacgcc tctcgtacat
     1861 cctgagcctc aagcacactg gcttcattga atttgcaggt aaggcaccac gcggcggtaa
     1921 aatcgacaaa gacagtccgg ccttgctcca gttcggtttg caggcgttcg ggcgtgaacc
     1981 gctgccagtc accttggatc tgcgaatcta ctgaagcaat ttttgcggac tgaaatttgt
     2041 cgccgatgaa ataaacaccg ctcccgatta cgagcaggag catgagcgcg agcacgacga
     2101 tccgcttcac ggctggtgcg gttggcacaa cgaacgcgcc tttcatccag cacgcgacac
     2161 tgatcacaag caggaaacaa ctcgcccaga tcgctccttc caagccgcgt tgtgcaccga
     2221 ctacataaag cagaaatagg agcgtcgcca acagcaggaa gcccatgaat tgtttcacgt
     2281 gcagcatcca aggcccgggc cttggcaaaa agcggagcca cgcaggctgc gcgctcaaaa
     2341 gcagatatgg cgcgctcata ccggcagcaa tagcaacgaa catcgctaga atgattgccg
     2401 ctgactgtgt gaacgcgaag ccgagcgcgg tgccgagaaa tggcgccgtg cacggcgtag
     2461 ccagcacggt cgcgaacacg ccttggaaaa atgagccgag cagatccttg cgatcgctcg
     2521 tcgaaagcaa attgcgcgta accgattgtg gcaacgaaac ctcaaacacg ccgaagagat
     2581 tcagcgcgaa tacaagcaca atcacactca aggcgaggac gaagtaagga ttcgtgaact
     2641 gaaaaccgcc ccacgttaca tcacgcccgg cgcctttaag tgcgatcagc aagatcgcca
     2701 gcgcaatgaa ccatgcaaaa attccaatga tgaacgcaat cccgctgcga agaatcttcc
     2761 gtcggctctg tccggcttgt tggacaaagc cgaaaatctt gagcgagatc accggcaaaa
     2821 cgcacggcat caaattcaaa ataaggccgc cgagaaaccc aaagagcaga aacgtgaaaa
     2881 ttccgcgcgc cggcgccggc cgagcggaaa gtgacgcaga caatcctgtc tgcgcccctg
     2941 cggggcctgt cgtgatctgc cacgccgcgc gatcatcgcc gttcggctgc tgcgcaaaca
     3001 ccacgagacc cgccatcgac gacagatcct tcggcgccga ctcaagcgga acgcgaaaca
     3061 caatttcatt gttgttccgc gattgaacct cgggatgccc aacgattgtc tcctgctcag
     3121 gcaacgcaaa gaaatcgact gcccgatatt tcgccaaagt ttcgctcgta attttcaagc
     3181 gaagatcgga tcccacccgg ctccaatcga cgcgcgccac atcaggtccc ggcagatttt
     3241 gtgaaactag acgccgataa cgggcgaaga cgtcagtgtt cgccggctgg cttgttgatg
     3301 ctacaggcag atctaactgc aatgttgcgc tgccggggat gcagattttt tcgcatacga
     3361 gccaatttgc ttcggcggga aggttcgctg acgaactgtc gattttccct gggggcgtga
     3421 tttcctgcat cagcaggact tcattttcgt agccgtaggt ttcaatgtcg cccggatcga
     3481 tcgtcttcag cggaattggc cattggatct cgccgacctt ccagcccggc ggcagcttcc
     3541 atttcagttc cgtggggagg cctgcgtcgc cggaaaactt ccagtaggtg tgccagcccg
     3601 gagccattcg cagcagcaag ccgacagtaa acgacttgcc tggcacaatc gcggttgtat
     3661 cggctaaa
//
LOCUS       DATDAJ010000221         7919 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1259506, whole genome shotgun sequence.
ACCESSION   DATDAJ010000221 DATDAJ010000000
VERSION     DATDAJ010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7919
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259506"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1229
                     /locus_tag="VIS53_05440"
     CDS             <1..1229
                     /locus_tag="VIS53_05440"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEY5767259.1"
                     /translation="GKYSIVARHGDWEMRSDVDVQRSDTANKSFAFVRALTNISSEPS
                     GAEIFVDGQSRGRTPLRLDLPARSHELVAHLDGWPDEQQRIDVVAQRDNAAHFVFANG
                     SVKITSAPGGATVIANGKDLGQTPLVIEEVKPGDVTYELRLSGYKQGSVSGKVEPQQQ
                     TFLAARLEKTVGPAPGQPFTNSLGMKFVPLADVQISIWETRVQDYEAFLRATGRRYEP
                     PDFHQTPTDPTVRVSWFDAVAFCKWLTEKEQNENLIDDREMYRLPTDSEWSMAVGLVN
                     ESGPTPEARDGKIKNEFPWGKQWPPPNDAGDYAGTSGKRRSATLPVGSFKSNSIGLFD
                     LGGNVWEWCLDTYKGDNRATGREWGVLRGGSWATRNRLEMQSSYRNVVDRNERDVIYG
                     FRCVLATKPGEDMKGH"
     gene            complement(1258..1431)
                     /gene="rpmH"
                     /locus_tag="VIS53_05445"
     CDS             complement(1258..1431)
                     /gene="rpmH"
                     /locus_tag="VIS53_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEY5767260.1"
                     /translation="MKRTYQPSKRTRKRQHGFRARMRTKGGRATLARRRQRGRKRLLP
                     KGVDRHYARHTQA"
     gene            1630..2115
                     /locus_tag="VIS53_05450"
     CDS             1630..2115
                     /locus_tag="VIS53_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5767261.1"
                     /translation="MAEKENVVIEPATEADLDELSEMLRELFAQEGDFHPDKDKQLRG
                     LRLIFEQPSRGRVFVLRRNGAIVGMINLLFTISTAEGGFVMLLEDLVVHTQYQGHGYG
                     NKLLEHAIDFAKKKNFLRITLLTDRPENVAQAFFRKHGFVDSSMIPMRLWIAPQQNLE
                     Q"
     gene            complement(2226..4874)
                     /locus_tag="VIS53_05455"
     CDS             complement(2226..4874)
                     /locus_tag="VIS53_05455"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF023266.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HEY5767262.1"
                     /translation="MRVPLAFLVLFLIRSLVGAVEKPFNFNETPGKLPKEVVPTEYAI
                     RIVPNLDNFTFAGSETVKLNVRSPVQQLVLNGLELKIEAASVDGKDLPLPAIKTENEK
                     ELVTLTLPSELAVGDHALTLRFTGKINQQGQGLFYMRYQEQGSRARKIMLGTQFEATD
                     ARRFFPCWDEPAFRARFQLTVVVPEDWLAVSNMPIESEQKIASGKEVRFASTPSMSSY
                     LNVFVAGQLDVIESQVGATQIRVIATKGKAELGRYALEASAEILKYFNDYFGVPYPLP
                     KLDQIAIPGGFGGAMENWGGITYYESRLLFDPKSSSVETKQNIYEVLAHEMAHMWFGD
                     LVTMAWWDNLWLNEGFASWMGSKCTAHFNPQWEVWLARELPRDPTRRTGIAKEAAMEG
                     DARSTTHPIQQHVATEAEANSAFDDITYKKGQSFLRMLENFLGEDVFRDGVRQYVAAH
                     QYSNTTTADLWSALSEASNKSVSEIAAGWTKQPGFPVVTVKRESDGKIRLTQERFTVN
                     FKKPPPLLWQIPLTYSVVGETRATLLMTDKTAALENIPTDRALKLNLNGAGNYRVEYD
                     DRSWELLLKALSNLGVEDRVNLMSDAWAFVQAGRAPVSLYFGLVEKLPASIDLAEREQ
                     IVNVMDFVNRLLVGSSEREKFQRYARSLLRSTFATLGWEPKPDEPPNAGRLRASLIGA
                     LGHLNDPEIIAGCRERFEKYLAHPASLAPDLRAPVLGVVGRNADEKTWNKLHDLGLKT
                     TSIEDQQNYYNALACATDPKLVRKTLAIALTDELPTSRAIFLVSRVARDSGHPDLAWE
                     FAKANMKALLAKVDAAGANRYAPSLFTFFSDGSRADELRNYAAKGLTPASAPEVAKVV
                     DEIQFRAEFRKRLATQLSGWMERKNR"
     gene            complement(4965..5408)
                     /locus_tag="VIS53_05460"
     CDS             complement(4965..5408)
                     /locus_tag="VIS53_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767263.1"
                     /translation="MHRSLAVVIFVLLFTTSVALASQAAEKVWSGLVIAENVTEPQPI
                     PAELIRIEGLLKKFFGYNQFKVIGQSQKTLKTGQEDWLATSKFFGLHVDARGETQGGY
                     VLNLKLYKEKELLLETEAKLSKRSPLVIKGPQVGGGQLLLVLVVQ"
     gene            complement(5415..5939)
                     /locus_tag="VIS53_05465"
     CDS             complement(5415..5939)
                     /locus_tag="VIS53_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767264.1"
                     /translation="MKTFEEKWTAWLDGQLRGRELSEFEASLPDKAAAQAEKAEAKKL
                     GELLKRELSAHPLKNEDFFGHQLRERIVQESGEQRRERARRSPTSSWWTIPRLLSAGT
                     ASLAVFLICTLLVMHQERPPEESQYLTQILNARVDPVVSPNGTVSIFEVKQDRVTVLW
                     TEGLQTLPADYAAK"
     gene            complement(5926..6537)
                     /locus_tag="VIS53_05470"
     CDS             complement(5926..6537)
                     /locus_tag="VIS53_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767265.1"
                     /translation="MQTEATLAQSDVSELDLVKRCQSGDTEAFDELVTRYRTRVFGMI
                     YNMVHNEQDAWDLAQDSFLKAWKSIGRFRGQSSFYTWIYRIVMNVTIDWLRKKKIKGG
                     DAEFDDAIQLREIDPASKTVPKTEALPHQAMERDEIRARIENAIGQLSPEHRAVILMK
                     EIDEMQYHEIAETLGCSIGTVMSRLFYARKKLQTLLRDVYENV"
     gene            complement(6566..7237)
                     /locus_tag="VIS53_05475"
     CDS             complement(6566..7237)
                     /locus_tag="VIS53_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767266.1"
                     /translation="MAGNWGEPERMWDEYDWERFLQQQDGKTEKYMQLLETYLDDPRR
                     DEIIAREMGWTQLLDEKDWSAEVDALLDETATEEEESDVDNTAASGETFQEHDLYRAA
                     FDLTLWIDQLFDQNPTLQNEPAAVKLATHAALASAKLAAALSGDHLDEIGMTIAYLKR
                     ALKAITTSMNAAAQLRKAAGLISRSEYLVLQQRLFEVRDGIVSLMGEYRAEWRRRFGP
                     DSFQR"
BASE COUNT         1713 a         2225 c         2123 g         1858 t
ORIGIN      
        1 ccggcaaata ctcgatcgtc gcgcgccacg gtgactggga aatgcgcagc gacgttgacg
       61 tgcaacgcag cgatacggcg aacaaatcct tcgcgtttgt tagggcgctc acaaacatta
      121 gcagcgaacc cagcggcgcc gagattttcg tggatggaca atcgcggggg cgcacgccgc
      181 tgcgtctgga tctgcccgcc cgttcgcacg aactggtcgc gcatttggac gggtggcctg
      241 acgaacagca aaggattgac gtcgtcgcgc aacgagacaa cgcagcgcat tttgtgttcg
      301 caaatggcag cgtgaagatc actagcgcgc cgggcggtgc gactgtgatt gcgaacggaa
      361 aagatttggg acaaacgcct ctggtaatcg aggaagtgaa gcctggcgac gtcacgtacg
      421 agctgcgtct atccggctac aagcagggat cggtcagtgg aaaagtcgag ccgcaacagc
      481 agacatttct ggcggcgcgt ttggaaaaga ccgtcggtcc cgcgccgggg caaccattca
      541 ctaattcatt aggcatgaag ttcgttccgc ttgccgacgt tcagatttcg atctgggaaa
      601 cgcgggtaca ggattacgaa gcatttttgc gtgcgacagg ccgacgatat gagccgcccg
      661 atttccatca gacaccaact gatccaactg taagagtgag ctggttcgac gccgtggcgt
      721 tttgcaaatg gctgaccgaa aaagaacaaa acgaaaatct gattgacgat cgagaaatgt
      781 atcggctgcc aaccgattcc gaatggagca tggccgtcgg cttggtgaat gaaagcggtc
      841 cgacgcccga agcgcgcgac ggcaaaatta agaacgaatt tccctggggt aaacaatggc
      901 ctccgccaaa cgacgcagga gattatgcgg gaacttcggg aaagcgacgc agtgcaacgc
      961 tgcccgtggg aagtttcaag tccaattcga taggcctatt cgatcttggc gggaacgttt
     1021 gggaatggtg tctcgacact tataaaggcg acaaccgtgc aactggtcgc gaatggggag
     1081 tgctgcgcgg cggctcctgg gccacacgta atcgtctcga aatgcaatcc tcttaccgaa
     1141 atgtagtcga tcgcaatgag cgagacgtga tttacggatt tcgctgtgtg cttgcgacga
     1201 aacctggcga ggacatgaaa ggtcactaac cagtcagcga ttttcgaact tcgaagatca
     1261 agcttgcgtg tggcgggcat agtgcctgtc aacgcccttt gggaggaggc gtttgcgacc
     1321 gcgttggcgc cggcgcgcta gagtggcgcg gccgcccttt gttcgcatgc gcgcgcgaaa
     1381 accgtgctga cgtttacgcg tccgtttcga tggctgataa gtgcgtttca tagaccgtga
     1441 acttgctccg gctcgctccg agagcgctta cactaggggc acgggcagcg ttgtcaacga
     1501 caccgaggcg ggagaaattt tgaggtacga ccgatttcgc acgatgacgc gttatccgct
     1561 acagacaaaa gggtctaatt tacaaagttg ccaacagggc gcatttctga aataacgact
     1621 cgcaccgata tggccgagaa agaaaatgtc gtgatcgagc cggcgactga agcggacttg
     1681 gacgagttgt cggaaatgct ccgtgaattg ttcgctcagg agggcgactt ccatcccgat
     1741 aaagataaac agctccgcgg attgcggctc attttcgaac agcccagccg tggccgcgtt
     1801 tttgtgctgc gccgcaatgg cgccatcgtg gggatgatca acttgctctt caccatcagc
     1861 acggcggaag gcgggttcgt catgctcttg gaggacctgg tagtgcacac gcagtatcaa
     1921 ggtcatggct acggcaacaa gcttctcgaa cacgcaatcg attttgcgaa gaagaaaaac
     1981 tttctccgaa tcacgctgct taccgatcgc cccgaaaatg tggcgcaggc gttttttcgg
     2041 aagcatggct tcgtcgattc ttcgatgatt ccgatgcgct tgtggatcgc accgcagcaa
     2101 aacttggagc agtgattcgc ctcggtccgg ccctgcaacg taacttaggc ttccagtctg
     2161 acagtcgtgc agacttccca gcctgcggtc gttcccgagc aggcaaggat gcccgtgtta
     2221 cgtaatcacc ggttcttccg ctccatccac ccgctcagct gagtcgccag acgttttctg
     2281 aattccgccc ggaactgaat ttcatcgacg actttagcta cttcgggcgc gcttgccggg
     2341 gttaagcctt ttgcggcgta gtttctcaat tcgtcggcgc gcgagccatc ggagaaaaac
     2401 gtaaacaggc tgggcgcgta gcgatttgca cctgccgcat cgactttggc gagcagcgct
     2461 ttcatgttcg cctttgcgaa ctcccaggca agatcgggat gaccgctgtc gcgggcgact
     2521 cgtgaaacca ggaagatggc acggctcgtt ggcagctcat ccgtaagcgc aatcgcaagc
     2581 gtcttcctca ccaatttcgg atcagtcgcg caagcgagtg cgttgtagta attctgttgg
     2641 tcctcaatgc ttgtggtttt cagaccgagg tcgtgcagtt tgttccaagt cttctcatcg
     2701 gcattgcggc cgaccactcc cagaactgga gcacgcaaat ccggtgcgag cgacgccgga
     2761 tgtgcgaggt atttctcgaa acgctcacgg cagccagcga tgatttccgg atcattcaaa
     2821 tgtccgaggg cgccgatcaa acttgcacgc agccttccag cgttcggcgg ttcatccggt
     2881 ttcggctccc accccagggt cgcaaatgtt gagcgcaaaa gcgatcgagc ataccgttgg
     2941 aatttttcac gttcagaact gcccaccaac agacggttca cgaaatccat cacgttgacg
     3001 atctgttcgc gttcggccag atcgatagaa gcgggcaact tttcgactaa tccaaagtag
     3061 agcgagaccg gcgcgcgacc ggcttgcaca aacgcccagg catcgctcat aagattcacg
     3121 cgatcttcaa cgcctaagtt cgagagcgcc ttaagcaaca attcccacga ccggtcatca
     3181 tattcgaccc gataatttcc agcgccgttg aggttcaatt tgagtgcgcg atctgtcgga
     3241 atgttttcca gagccgccgt tttatcggtc atcagcaaag tcgcccgtgt ttcgccaacg
     3301 accgaatacg tcagtgggat ttgccagagc agtggcgggg gcttcttgaa attcactgtg
     3361 aagcgctcct gagtaagccg aatcttgccg tcgctttctc gcttaacggt cacgacagga
     3421 aatccgggct gcttcgtcca gccggccgca atttcactta ctgatttgtt cgaagcttcc
     3481 gaaagcgcac tccacaaatc cgcagtggtt gtgttcgaat attggtgcgc ggcaacgtac
     3541 tgccgaactc catcgcggaa aacgtcctcg ccgagaaaat tctccagcat tcgcaggaac
     3601 gactggcctt tcttgtaggt gatatcgtca aacgcgctat tggcttcggc ttccgttgcg
     3661 acatgctgct gaatcggatg ggtggtcgag cgcgcgtcgc cctccatcgc cgcctccttt
     3721 gcgattccag tccgccgcgt tggatctcgc ggtagttctc gggcgagcca gacttcccat
     3781 tgcggattga aatgcgcggt gcatttgctg cccatccagg aagcgaatcc ttcattgagc
     3841 cagagattgt cccaccacgc catcgttaca aggtccccaa accacatgtg cgccatctca
     3901 tgcgccaaca cttcataaat attttgcttc gtctcgacgg aggaactttt cggatcgaag
     3961 agaagcctcg attcgtaata ggtgatgccg ccccagttct ccatcgcacc accgaagccg
     4021 ccaggaatag caatttgatc cagcttcggc aaaggatagg gcacgccgaa ataatcgttg
     4081 aagtacttca aaatctccgc tgaagcctcg agggcgtagc gacccagttc tgctttgccc
     4141 tttgtcgcga ttacgcggat ctgcgtcgcg cctacttgcg attcgataac atcgagttgg
     4201 ccggcgacga atacattcag gtaactggac atcgacggag ttgatgcgaa gcgcacttct
     4261 ttcccgctgg cgattttttg ctcgctctcg atcggcatgt ttgagacagc gagccaatcc
     4321 tcgggcacca caacggttaa ttgaaaacgc gcgcgaaaag ccggttcatc ccagcatgga
     4381 aagaatcgac gcgcatcagt cgcttcgaat tgcgtcccga gcataatttt gcgagcacgg
     4441 ctgccctgtt cctgatagcg catgtagaaa agcccctgcc cttgctgatt gatcttcccc
     4501 gtgaaacgaa gcgtgagagc gtgatcgccg accgcgagtt ctgacggcaa cgtaagcgtc
     4561 acgagttcct tttcattttc ggtcttaatc gctggaagcg gcaagtcttt gccatcgaca
     4621 gaggccgctt cgatcttgag ttcgagcccg ttcaacacca gttgttggac cggactccgc
     4681 acgttcagct tcacggtttc acttccggcg aacgtgaaat tgtcgaggtt cggaactatg
     4741 cggattgcgt attccgtcgg gactacttct ttcggaagtt ttccgggcgt ctcgttgaag
     4801 ttgaacggtt tttccacagc tccgactaac gaccttatca aaaacaaaac cagaaatgcg
     4861 agtggaacgc gcatgtgacg attaaagaac ggctcttatt tttttgaatg gtagggacgg
     4921 cgcgccgagc cgtcgctccg gcgcgcccgg cggtcgcgcc ctacctactg aacaactaat
     4981 acaagcagca attgtccccc acccacctgc gggcctttga tcaccagcgg gctgcgtttg
     5041 ctcagcttcg cttcggtctc gagcaaaagc tccttctcct tgtaaagctt caggttcaaa
     5101 acatagccac cttgggtttc accgcgcgcg tctacgtgca gtccgaaaaa tttgctcgtc
     5161 gcaagccaat cttcctgacc ggtcttaagg gttttttgcg attgaccgat caccttaaac
     5221 tgattgtagc cgaaaaactt tttcaacaat ccttcaatcc gaatcaattc tgccgggatc
     5281 ggctgcggct ctgtaacgtt ctctgcgatg accagcccac tccaaacttt ctccgccgct
     5341 tgcgacgcga gcgccacgct ggtcgtgaag agaagaacaa agattacgac cgccagcgac
     5401 cgatgcatga acagttattt cgcggcgtaa tcggccggca aagtttgtag tccttcggtc
     5461 caaaggactg ttacacggtc ttgtttcacc tcgaagatcg agaccgttcc attcggacta
     5521 acgacaggat cgactcgggc attgagaatc tgtgtcagat attgcgattc ctctggcggt
     5581 ctttcctgat gcataaccaa gagggtgcaa attaagaaca cagcgagcga ggccgtgccc
     5641 gccgacagca ggcgcggaat cgtccaccaa ctggaggttg gacttcggcg agcgcgctcc
     5701 cgacgttgct ccccactttc ctgcacgatc ctttcgcgga gctgatgacc aaagaaatct
     5761 tcgttcttca gtggatgcgc actcaactcg cgttttaaca gctcgccgag ttttttggcc
     5821 tcggcttttt cggcttgagc ggcagctttg tcaggaagcg acgcctcgaa ttccgataat
     5881 tcgcgccccc tgagctggcc gtccagccac gccgtccatt tctcctcaaa cgttttcata
     5941 aacgtctctc agtaaggttt gcaatttctt ccgcgcataa aacagccggg acattacggt
     6001 accaatcgaa caccccagcg tttctgcgat ttcgtgatat tgcatctcgt cgatttcctt
     6061 catcaaaatc actgcgcggt gttcgggtga cagctggcca attgcgtttt cgatccgggc
     6121 acggatctcg tctcgttcca tcgcttgatg gggcaatgct tccgttttcg gcactgtttt
     6181 ggacgccgga tcaatctctc tcagttgaat tgcatcatcg aactcggcat cgccgccttt
     6241 gatcttcttc ttgcgcagcc aatcgatcgt cacgttcatg acgatgcgat aaatccatgt
     6301 gtaaaaggat gactggccgc ggaagcgtcc gatcgacttc cacgctttta ggaagctgtc
     6361 ctgagccaga tcccatgcgt cctgttcgtt gtggaccatg ttgtaaatca tgccgaatac
     6421 tcttgtacgg tagcgagtta ccagctcgtc gaatgcttcg gtgtcaccgg actggcatcg
     6481 ttttaccagg tccaattccg acacatcgga ctgcgccaga gtcgcttccg tttgcatgat
     6541 tggacggagc gggcccttat ttcattcaac gctgaaaact gtccgggccg aaacgacggc
     6601 gccactcagc gcgatattca cccatcaggc ttacgatgcc gtcacggact tcaaagagcc
     6661 gttgctgcaa caccagatac tccgaccggc taatcagtcc cgcggccttt cgcagttgcg
     6721 cagctgcatt catcgaggtg gtgatcgcct tcaaggcccg tttcaaatac gcgatggtca
     6781 tcccgatttc gtcgagatga tcaccgctca acgctgctgc cagcttcgcg ctggccagag
     6841 ccgcgtgagt ggccagctta acggctgcgg gctcgttctg gagggtaggg ttttgatcga
     6901 acaattgatc gatccaaagc gtgagatcga acgcggcgcg ataaagatcg tgctcctgga
     6961 acgtttcgcc agaggcagct gtattgtcga cgtctgactc ttcctcttcg gtagcggttt
     7021 catccagaag cgcgtccacc tctgcgctcc agtctttttc atccagcaac tgcgtccacc
     7081 ccatttcgcg cgcgataatt tcgtcacggc gcggatcatc cagatacgtt tccagcaact
     7141 gcatgtactt ttcggtcttg ccgtcttgtt gctgaagaaa acgctcccag tcgtattcgt
     7201 cccacatgcg ttcaggctcg ccccagttgc cggccatgca gaactaaacg cgagcttctc
     7261 tttccgcgca aaattttttc gtggcggctt tctttcggca tcaacccacg aatttcgctg
     7321 gttgcagcag tccctgcgat cagtaggttc ggtttcgtga ataaacgttc tgcatggtct
     7381 gggatgcttg ttttggtact cgcgtggctg ctttccgctt gcgcctcgtc accccaggaa
     7441 ggcgtcgtaa cggaaaatgc atccgaacca aagatgacat ctaccgcggc ccacttccca
     7501 cgtccggcat atgctcccgg cgccgatgca ggaatgaatt ctgggcactt ctaattagga
     7561 ggcctattgt tgagactata agcgcgcttt gtaagcgccg tcgtttggcc tggttgcatc
     7621 ggagatgccc cgcacatagg ttcgggttag tgattaaacg agtcgcactg acagcctttc
     7681 tggttttgct gattgcattt ttgctcgccg cctgcacgac agcaacgctc tccgatccgt
     7741 cgtcctcgca atctggcgca gctgtccccg gagaaaaaat gtccgatgac caacgttacg
     7801 gtcccggacc gatgggatcc ggcaacgtgc gctggtgaca gcgacgttga agcgttaaac
     7861 cgttgaagcg gaggaagaat cgcggctcga tccgctttaa cccttcaacg cttcgacgg
//
LOCUS       DATDAJ010000222         4691 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1259552, whole genome shotgun sequence.
ACCESSION   DATDAJ010000222 DATDAJ010000000
VERSION     DATDAJ010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4691
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1259552"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2044
                     /locus_tag="VIS53_05480"
     CDS             <1..2044
                     /locus_tag="VIS53_05480"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY5767267.1"
                     /translation="LADEGMWLFNAPPLKQLKENYQFEPSPQWLEHLQRASVRFNSGG
                     SGSFVSPNGLVITNHHVGADTLQKMGSAEHNYLRDGFYAKTQADEIKSTDLELNVLMS
                     IEDVTARVTGALKPGMTSDQASTARGSAIAAIEKESKDKTGLRSDVVTLYQGGAYHLY
                     RYKRYDDVRLVFAPEQQMAFFGGDPDNFEYPRYDLDICLFRVYENSQPAKIEHFLKFN
                     SNGPTDGELIFVSGSPGKTDRQLTLAEMADMRARYLPYVLNMFYRREVLESSFSACSF
                     ENARKAREDLFGDQNNRKRYDGYLAGLLDPQIWSGLEAREGKLGDAIGRDAKFESTLS
                     AYDRIKRAQAEIAKNAPVYNYLEQERPVTVGYRGPRAFSGDLFKYARLLLRAADERVK
                     PNGERIPTFRDSARESLELQLFSNEPIHDDYEILRLTDSLTDFASAFGADNTLVKNVL
                     AGKSPHARAVELVSGTKLKDASVRKDLYGKDAAALQAAHDPMIDLARMIDAQAREARK
                     TYNAHDEIKKQAYADIANARFALEGASSYPDATFTLRLSYGTVRGYEQDGKQIPAFTD
                     FAGLYQRSTEHDNRPPFDLPKRWLDKKSNLNLATKFDFVSDADIIGGNSGSPVVNKAN
                     EFVGIIFDGNIQSLVTDCTYTDTQARAVSVDSAAIIEALRKVYDASALATELEGKK"
     gene            complement(2123..2914)
                     /locus_tag="VIS53_05485"
     CDS             complement(2123..2914)
                     /locus_tag="VIS53_05485"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY5767268.1"
                     /translation="MKHFVFALVLLAGSVLAAEEVKDFGRDRLNTSPRHADWVDVKLG
                     ARGIKAFVVYPERKDKAPAVLVISEIFGLTDWVRSLCDELAENGVIAIAPDLHAGQKF
                     EDPDGARKATSALSKAEVKADLDATAEYALTKIPACSGTLAVCGFCWGGGVAFEYANE
                     SAKLKAAYSFYGVAADSPDKVKNIACPVYGFYAENDERVDATIPKAEELMKAAGKTYE
                     PVIYKGAGHGFMRLGEPTNPAVREADRKARDEAWERWKKLLKQLP"
     gene            complement(2942..3346)
                     /locus_tag="VIS53_05490"
     CDS             complement(2942..3346)
                     /locus_tag="VIS53_05490"
                     /inference="COORDINATES: protein motif:HMM:NF016089.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY5767269.1"
                     /translation="MNSLTRYAIPFYSIMRLIVGLMFFCHGGQKIFGWFAPPGQHADP
                     LPPLMVVGGWIEIVAGILIAVGLFTRLAAFIASGEMAVAFFTMHAKGSLLPIVNKGEL
                     AVVYCFLFFYIFLYGPGAWSLDVILRKTTPTS"
     gene            complement(3437..4279)
                     /locus_tag="VIS53_05495"
     CDS             complement(3437..4279)
                     /locus_tag="VIS53_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY5767270.1"
                     /translation="MARAIWKGSISFGLVNIPIALYAATRREELKFRLLRKTDLSPVN
                     YKRVAEKDGKEVPWDQIVKGYEYEKGKFVVLQEEDFQRVDLEATQTVDIQDFVDLEEI
                     DPMFFYKPYYLEPQKGGDKAYALLRDALKDTNKVGVAKVVIKTRQYLAGVKPEDGALV
                     LELMHFADELADAEQLHVPKKLEVGKREMNMAKSLIDSMSSKWNPEKYKDDYREALMD
                     VIEEKVEAGGKEIEEKPRKAPKPTKVIDLVSVLQKSLEQSGAKGKNKSKSRSKKAHPT
                     RKAA"
     gene            complement(4421..>4691)
                     /locus_tag="VIS53_05500"
     CDS             complement(4421..>4691)
                     /locus_tag="VIS53_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY5767271.1"
                     /translation="NTSHLAEMGEEKLPTYFVLNASRLVSATEINHYNLHEKREVVSH
                     FWLPNGPAVIGITAGASCPNNLIEETLIRLFELRGISRRDLELAA"
BASE COUNT         1081 a         1337 c         1201 g         1072 t
ORIGIN      
        1 attagccgac gaaggcatgt ggctcttcaa cgcgccgccg ctaaaacagc tcaaggaaaa
       61 ttatcagttc gagccgtcgc cgcagtggct tgaacatctc caaagggcca gtgttcgctt
      121 caactctggc gggagcggat ccttcgtttc gccgaacggc ctcgtcatca caaaccatca
      181 cgtcggcgct gacacgttgc agaagatggg cagcgccgag cacaattacc tgcgggacgg
      241 tttctatgcg aaaacgcagg ccgacgagat caaatccacg gacttggagt tgaacgtgct
      301 gatgtccatc gaggacgtaa ccgcgcgcgt caccggcgca ttgaaaccag gcatgacgag
      361 cgatcaggct tccactgcgc gcggctcggc catcgctgcc attgaaaagg aaagcaaaga
      421 taaaaccggg ctgaggtcag atgtcgtcac actctaccag ggcggcgcgt accatcttta
      481 ccggtacaaa cgttatgatg acgtgcggtt ggtcttcgcg cctgagcagc aaatggcctt
      541 cttcggcggt gaccccgaca acttcgaata tcctcggtac gatctcgata tctgcctttt
      601 tcgagtgtac gaaaatagcc aaccggcaaa gatcgagcac tttctcaaat ttaactccaa
      661 tggaccgacc gatggcgaac ttattttcgt aagcggcagc cccggcaaga ccgaccggca
      721 acttaccttg gctgagatgg ccgatatgcg cgctcgctat ctgccgtacg tcctgaacat
      781 gttttatcgt cgtgaagtgc tggaatcgtc cttcagcgcg tgttcgttcg agaacgcacg
      841 taaagcgcgc gaggacttgt tcggcgatca aaacaatcgc aaacgctacg acggttatct
      901 ggctggactg cttgatccgc aaatctggtc agggcttgaa gcgcgcgagg gaaaactggg
      961 cgacgcgatt gggcgcgatg cgaaattcga gtccacactt tctgcctacg accggatcaa
     1021 acgtgcgcag gctgagattg cgaagaacgc gccggtttac aattatctcg agcaggaacg
     1081 gccggtcacg gtcggttacc gcgggccgcg agcattctcc ggagatcttt tcaaatatgc
     1141 gcgcctgcta ctgcgggccg ccgatgaacg tgtaaagccc aacggagaac ggatcccgac
     1201 ctttcgtgat agcgcgcgcg aatcactgga actgcagctt ttctccaacg aacccattca
     1261 tgatgattac gagattttgc gacttaccga ctcgttgacc gatttcgcct ctgcattcgg
     1321 cgcagacaat acgctggtga aaaacgtgct cgctggaaag tcgccgcacg cgcgcgcagt
     1381 tgagcttgtc tccggcacaa agctcaagga tgcctctgtg cggaaagatc tctacggcaa
     1441 agacgcagcc gcgctgcaag cggcgcacga tcccatgatc gatctcgctc gcatgatcga
     1501 tgcgcaagca agagaagcgc gaaagaccta caacgcgcac gatgaaatca aaaaacaagc
     1561 ctatgcagat attgcaaacg ctcggtttgc ccttgaaggc gcgagcagtt acccggatgc
     1621 caccttcacg ctgcggctct cctacggaac ggtgcgcgga tacgagcagg atggaaagca
     1681 aatccctgcg ttcaccgatt ttgccggtct atatcagcgg tcgaccgaac acgacaaccg
     1741 accaccattt gatctgccga aacgttggct cgacaagaaa tcgaacctca atctggcaac
     1801 gaagttcgat ttcgtttccg acgccgatat tatcggcggc aacagcggca gtccggtggt
     1861 gaacaaagca aacgaattcg tcggtattat tttcgatggc aatattcaat cactggtgac
     1921 cgattgcact tacacggaca cgcaggcgcg cgccgtgtct gttgattccg ccgccattat
     1981 cgaggcgctt cgaaaagtct atgacgcgag cgcgctcgcg actgagttgg aaggtaaaaa
     2041 ataacgcgga taaagtccgc gacgccatgc tttcgatccc gtaagcagcc ggtctgtgtc
     2101 tccgcgggat tctgcgattc ctttatggca gttgcttgag cagcttcttc cagcgctccc
     2161 aagcttcatc gcgcgctttt cggtccgctt cacgaacggc gggattggtt ggttcaccca
     2221 agcgcatgaa accgtggcca gcgcccttgt aaatgactgg ctcgtatgtt ttcccagcgg
     2281 ctttcattag ttcctctgcc ttgggaatcg tcgcgtctac gcgttcgtca ttctcggcat
     2341 aaaagccgta aaccggacac gcgatatttt tcactttatc aggcgaatcc gctgccacgc
     2401 cataaaacga atacgcagcc ttcagtttcg cactttcatt cgcgtactcg aacgcaacgc
     2461 cgccacccca gcaaaatccg cacacggcga gcgtgccact gcacgcggga attttcgtga
     2521 gcgcatactc cgccgtggca tccagatccg ctttcacctc cgccttggat agcgccgacg
     2581 ttgctttccg cgcgccgtcc ggatcttcga acttctggcc ggcgtgtaaa tccggtgcga
     2641 tggcaatgac gccgttctcg gccagttcat cgcacaaact gcgaacccag tcggtgagac
     2701 caaaaatctc gctgataacg agtacggccg gggctttgtc cttacgctca ggataaacaa
     2761 caaacgcttt gatcccgcgg gctcccaact tcacatcgac ccaatcggca tgccgtgggg
     2821 aagtgtttag ccgatcccga ccgaaatcct tgacctcttc tgctgcaagc accgagccag
     2881 caagcagcac tagcgcaaat acaaagtgtt tcataacgag cacgaacgtc gattccaaag
     2941 cctagctagt aggcgtagtc ttacgcaaaa tcacatcgag gctccaggcg cccgggccat
     3001 aaaggaagat gtaaaagaaa agaaagcagt agaccacggc cagttcgcct ttgttaacga
     3061 tcggtaagag gctgcctttg gcatgcatcg tgaaaaatgc cacagccatt tcaccactgg
     3121 cgatgaaagc agctaaacgg gtaaacaatc ccacagcaat gaggatgccg gccacaattt
     3181 ctatccaacc acccactacc ataagcggcg gcaatgggtc ggcatgttgc ccgggcggtg
     3241 cgaaccatcc aaaaattttc tgtccaccgt gacagaaaaa catgagacca acgatcagtc
     3301 gcataatgga atagaacgga atcgcatacc gagttagtga gttcataatc gttcaggctg
     3361 agtgattttt ggataaagtg tcaagtctcc aggcatttcg ctcggcgccg ccgcgtcccg
     3421 aggaatgcgg ctgcagctac gctgctttcc tagtcgggtg ggcttttttc gaacgtgatt
     3481 tgctcttatt ttttcctttc gctccactct gttcgaggct cttttgcaaa accgacacca
     3541 ggtcgatcac ctttgtcggc ttcggtgctt tcctcggctt ctcttcgatt tccttgccgc
     3601 cagcttcgac tttttcctcg atcacatcca tgagtgcctc gcgataatcg tctttgtatt
     3661 tttccggatt ccatttcgag ctcatgctat cgatgagtga cttggccatg ttcatttccc
     3721 gtttgccgac ttccagcttc ttcggcacgt gcagctgctc cgcgtcggcg agctcatccg
     3781 cgaaatgcat caattcaaga acgagtgcac cgtcctcggg cttaacaccg gccagatatt
     3841 gccgcgtctt gatgaccacc ttcgcgacgc cgaccttgtt agtgtctttt aacgcgtcgc
     3901 gcaggagcgc ataagctttg tctccacctt tctgcggctc caggtagtac ggcttataga
     3961 agaacattgg atcaatctct tccagatcga cgaagtcctg gatgtcaaca gtctgagtgg
     4021 cttcgagatc aactcgctga aaatcttcct cctgtagcac gacaaatttg cccttctcgt
     4081 attcataccc cttgacgatc tggtcccagg gaacctcctt gccgtctttt tcagcaacgc
     4141 gtttgtaatt gaccggactc agatcggtct tgcgcaaaag acggaacttc agttcctccc
     4201 ggcgcgtagc tgcataaagc gcgatcggta tgttgaccag tccgaagctg atgctgccct
     4261 tccaaatcgc tcgtgccata taaggtattt cgtgccgcta tgacaaaatg cgtgggtaat
     4321 tcgagcgctg tagcgcccgc tgtccgcagc ggatttcacc ccgttgaatt cgcgacgttt
     4381 gatgcgctga ggacagcgca cactacagca atttttctga tcaggccgcc aactctagat
     4441 ctcggcgtga gatgccgcgt aattcgaaga gccgaatcag cgtttcttca atcaagttgt
     4501 tcgggcacga tgcgccggca gtgatgccga tcacagcagg cccgttcggc aaccaaaagt
     4561 gtgaaacgac ttcacgtttt tcatgcaagt tgtaatggtt gatttccgtc gcggaaacga
     4621 gccgtgaagc gttcagcaca aaataggtcg gcaacttctc ttcgcccatc tcggcgaggt
     4681 gtgatgtgtt c
//
LOCUS       DATDAJ010000223         4243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1260237, whole genome shotgun sequence.
ACCESSION   DATDAJ010000223 DATDAJ010000000
VERSION     DATDAJ010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4243
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260237"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VIS53_05505"
     CDS             complement(<1..299)
                     /locus_tag="VIS53_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767272.1"
                     /translation="MLYPNVVGQSGTASPTFLLVTIPPLQISRSVATHVSHANRLSQR
                     VDLPEFPQFILEKITANGADFADGFLVAVALWATRHKCCFYFSTALRTAKRLQLRT"
     gene            235..1188
                     /locus_tag="VIS53_05510"
     CDS             235..1188
                     /locus_tag="VIS53_05510"
                     /inference="COORDINATES: protein motif:HMM:NF014665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY5767273.1"
                     /translation="MVTSKNVGLAVPDWPTTFGYNMFLFPVSKWVGGILFEHTHRLMG
                     SLVGLLTIILAVWLWLRDDRRWVRSLGVIAVVGVILQGILGGLRVTMMKDQIGIFHAC
                     IAQAFLGLLVFIALVTTKFWPSLATRHFDSPKFSPIKSLAIAITVAIYVQLALGATMR
                     HQHRDLAILDFPTANGAWIPDTSAAALAKINAWRDARALSDVSSFQIWLQMVHRFLAL
                     IIAIAIIAFCGRVWRETPDFVGLKRLSLLWVVLIFGQICLGAWVIWSNKAADVATAHV
                     ALGAVMLSFGVSISAICWHISQPEVGRARPPGALHSEPVLA"
     gene            1185..2084
                     /gene="cyoE"
                     /locus_tag="VIS53_05515"
     CDS             1185..2084
                     /gene="cyoE"
                     /locus_tag="VIS53_05515"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: protein motif:HMM:TIGR01473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEY5767274.1"
                     /translation="MKTAAVETASIAASRHSFVSDLAELVKARLTLLVLLTTAVGFYL
                     GAEPPIDYKALFQTVFGTAAAAAGAAALNQWWERRADALMHRTKTRPVPAGRMAPLQA
                     LVLGASLSVFGVGYLAIVCNALSAVLTAITIVIYIFAYTPLKRTSTANTAVGAIPGAI
                     PPMIGWAAARGDISVGAWSLFVIVFLWQMPHFFAIAWMCREDYSRAGFRMISSDDSSG
                     ERSASQSVFFCILLLVLAGLPAFVGIASYIYQPIELVLGGLFVAVAMRFLRLRTPSAA
                     RLLFFASIAYLPLLLAALVLTKL"
     gene            2081..2734
                     /locus_tag="VIS53_05520"
     CDS             2081..2734
                     /locus_tag="VIS53_05520"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY5767275.1"
                     /translation="MNTTSATMNRAPSRSGIAWKVTLILIPVVTLGMLLWLRNLEVSA
                     LRQRTVSSYGTVPTFQLTNQNGQAFGSGQLAGKIWIADFIYTTCPGPCPMISGRMSEL
                     QKPLEKSDVHLVSFSVDPEKDTPAVLRGYAAKLQAEPGRWDFLTGPKSAIYKLSHDGF
                     KLAVSDGSEAQGLPVHSTRMVLVDRHGQIRGYYDVTEPDAITKLVADTSHLLREQPR"
     gene            complement(2791..3684)
                     /gene="rfbA"
                     /locus_tag="VIS53_05525"
     CDS             complement(2791..3684)
                     /gene="rfbA"
                     /locus_tag="VIS53_05525"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEY5767276.1"
                     /translation="MKKAILLAGGAGTRLYPLTKIVCKQLLPIYDKPMICYPLATLML
                     GGLREVLIISTPKDLPMLQHYLGDGTQLGIRIEYAEQAKPEGIAQAFLIGAKFIGDSG
                     ASLILGDNIFYGKLDFYRDALAIERGAYIFGYQVRDPERYGVVEFNAEGKAISLEEKP
                     KQPKSHFAVPGLYVYDNQVVNLCRTLRPSARNELEITDLNLLYMKQNQLHVKLLSRGM
                     AWLDTGTTTTLLEAGNYIATIEHRQGLKIACLEEIALRMGFISQSDLEKIIDGLSKNE
                     YRDYLRTVCDEGPTAGPESVG"
     gene            complement(3681..>4243)
                     /locus_tag="VIS53_05530"
     CDS             complement(3681..>4243)
                     /locus_tag="VIS53_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767277.1"
                     /translation="ERVAPSLEFLPDAMVLEAEWRTSPALAQQLEEDRAQQSSRAPGA
                     IFLRQARFALVLRKLIREKNASHIHATSSRALVCALMLKKVLGVTVSATIEPRSELSR
                     EWIQNALSECVGGRLSSRKLVEQLGGAFFLDKTTFRSAPRKTLGQITQKTHIDLTTGS
                     RFWQQWAEFLLRWNGSDRKSKIETPK"
BASE COUNT          852 a         1170 c         1207 g         1014 t
ORIGIN      
        1 gtccttaact gtagccgctt cgctgtgcga agcgccgtgc tgaagtaaaa acagcacttg
       61 tgccgcgtcg cccacagggc gacggctaca agaaatccat ccgcgaaatc ggcgccattc
      121 gcggttatct tttccaggat gaattgggga aattctggaa gatcgacgcg ttggctcaac
      181 cgattcgcat ggcttacatg cgtcgccacg ctcctgctga tttgcagcgg cggaatggtc
      241 accagcaaaa acgtcgggct cgccgtgccg gactggccta ccacgttcgg atacaacatg
      301 tttttgtttc cggtttcgaa atgggtcggc ggaattttgt tcgagcacac gcatcgattg
      361 atgggttcgc tggtcggact tctcacgatc atcctcgccg tgtggctttg gctgcgcgac
      421 gaccggcgat gggttcgcag cctgggcgtg atcgcggttg ttggcgtgat tctgcaagga
      481 attctggggg gtcttcgagt cacgatgatg aaagatcaaa tcggtatctt tcacgcctgt
      541 atcgctcaag cattcctcgg cttgcttgtt ttcatcgcgc tggtgacgac gaaattctgg
      601 ccgtcgctcg caactcggca ttttgattcg ccaaaatttt cgccaattaa atcgctcgcg
      661 attgcaatca cggtggcgat ttacgtgcag ctggcgctcg gggcaacgat gcggcatcaa
      721 catcgcgatt tggcgattct ggattttccg accgcaaacg gcgcatggat tccggatacc
      781 agcgcggcag ccttggcaaa gatcaacgcg tggcgcgatg cccgtgcgtt gtcggacgtg
      841 agctcatttc aaatctggct gcaaatggtg caccggtttc tcgcgttaat tatcgcgatc
      901 gcaataattg cgttttgcgg ccgggtctgg agagaaacgc ccgatttcgt tggtctcaaa
      961 cgattatcac ttctttgggt cgttttgatc tttggccaga tttgcctcgg tgcctgggtg
     1021 atctggagca ataaagccgc cgatgtcgcc accgcgcatg tcgcgctcgg cgcggtaatg
     1081 ctatcctttg gtgtgagcat cagcgcgatt tgctggcaca tttctcagcc agaagttggt
     1141 agggcgcgac cgccgggcgc gctgcacagc gaaccagtgc tcgcatgaaa acggccgcgg
     1201 ttgaaactgc aagcattgcg gcttcgcgtc acagtttcgt gagcgatctc gctgagctgg
     1261 tcaaagcgag actgacgctg cttgtgttgc taacgaccgc agtgggcttt tatctcggag
     1321 ccgaaccgcc gatcgattat aaggcgctct ttcaaaccgt cttcgggact gcggcagcgg
     1381 cagcaggcgc agccgcattg aatcaatggt gggaacgccg agcggacgcg ctcatgcacc
     1441 gcacaaagac gcgaccggtt ccggcggggc gcatggcgcc gcttcaagcg ctagtgctcg
     1501 gtgcctcgtt gtcggttttc ggcgtcggtt acctggcgat tgtttgcaac gcgctcagcg
     1561 cggtgctgac ggcaatcact atcgtgattt acatttttgc gtacacaccg ctaaagcgca
     1621 ccagcacagc caacacggcc gtcggcgcga ttccgggcgc aatcccgccg atgatcggct
     1681 gggcggctgc gcgcggggac atcagtgttg gtgcgtggag tctcttcgtg atcgtgtttt
     1741 tgtggcagat gccgcacttc ttcgccatcg cctggatgtg ccgcgaagat tattcgcgcg
     1801 cagggttccg catgatttca agcgacgatt ccagcggcga acgcagcgcc agtcagagtg
     1861 tgttcttctg cattctcctc ctggtgctcg ccggtctgcc cgcatttgtt ggaattgcca
     1921 gctatatcta tcagccaatc gagcttgtgc tcggtggact tttcgtcgcg gtggcaatgc
     1981 gttttctgcg cctgcgaacg ccgagcgctg cgcgtctact gtttttcgca tcgatagcgt
     2041 atcttccgct gttactggcg gctttggttt tgacgaaatt atgaacacga cgtctgcgac
     2101 aatgaatcgt gcgccatcac gcagcggtat cgcctggaaa gtgacgctga tcctcatccc
     2161 ggttgtcacg ctaggcatgc tgctatggtt gcgaaatctc gaggtgtcgg cgctgcgtca
     2221 gcggaccgtt tcctcttacg gcacggtacc cacttttcag cttacgaatc aaaacggaca
     2281 ggcgtttggg tcagggcagt tggccggtaa aatttggatc gcggatttta tttacacaac
     2341 gtgcccgggg ccatgcccga tgatcagcgg ccggatgagc gaattgcaaa agccgctgga
     2401 gaaaagcgac gtgcatttgg tttcgttcag tgtcgatccg gaaaaggaca caccggcggt
     2461 tttgcgtggc tacgcagcga aattacaagc cgagccggga cgctgggatt ttctgaccgg
     2521 accaaaatcc gcgatctaca aactttccca tgatggtttc aaacttgcgg tgtcagacgg
     2581 aagcgaggcg caaggacttc ctgtgcacag cacgcgaatg gtcctggtgg atcgacatgg
     2641 tcaaatccgc ggctattacg acgttacaga acccgacgcg ataacgaaat tggttgctga
     2701 taccagtcat ctgctgcgcg agcagcccag gtaatttgta gccgtcgcgt tgtgcgcgac
     2761 gagagcttcg cgcaacgaag cggctacagt tcatcccacc gattccggcc cggcggtggg
     2821 cccttcatca caaaccgtgc ggagataatc gcggtactca tttttcgata atccatcgat
     2881 gatcttttcg aggtcggatt ggctgatgaa acccattcgc aacgcgattt cctccaggca
     2941 tgcgatcttc aagccctgcc gatgctcgat agtggcgatg taattgccgg cctcgagtag
     3001 cgtcgttgtg gttccggtat caagccaggc catgccgcgg ctgagcagtt tcacgtgcaa
     3061 ctggttctgc ttcatataca gcaagttcag atcggtaatc tccagttcgt tacgcgctga
     3121 tgggcgcaac gtccgacaaa ggttaacgac ttgattgtcg taaacgtaaa gaccgggcac
     3181 ggcgaaatgg ctctttggct gtttgggttt ctcctcgagg ctgatcgctt ttccttcggc
     3241 attgaactcg accacaccgt accgctcagg gtcgcgaact tgatacccga aaatgtacgc
     3301 gccacgctcg atagcgagcg cgtcgcgata gaagtcgagt ttaccataga aaatgttgtc
     3361 gcctaaaatc agcgacgcgc cggagtcacc gataaatttc gccccgatca gaaatgcctg
     3421 ggcgattcct tccggcttcg cttgctcggc gtactcgatc cgaattccga gctgtgtgcc
     3481 atcgcccaga taatgttgga gcatcggcaa atcttttggc gtggaaatga tcagcacctc
     3541 gcgcagaccg ccgagcatca gggtcgccag cggataacaa atcatcggct tgtcgtaaat
     3601 cgggagcagc tgtttgcaga cgattttggt caacggataa agacgtgtcc ccgcaccgcc
     3661 ggcgagcaga atggcttttt tcattttgga gtttcgattt tcgattttcg atcgctgccg
     3721 ttccagcgca aaaggaactc cgcccattgc tgccaaaaac gcgagcctgt cgtcaaatcg
     3781 atatgagtct tttgagtgat ttgcccaagc gttttccgcg gagcagaacg gaatgttgtt
     3841 ttgtccagaa agaacgcacc accgagttgc tcgaccaatt tccgactgct cagacgaccg
     3901 cccacacatt cggacaacgc attctggatc cactcgcgcg acaactccga tcgcggctcg
     3961 atcgtggcgc ttactgtcac accgaggacc ttctttaaca tgagcgcgca aaccagcgca
     4021 cgggaactcg tagcgtgaat gtgcgatgcg tttttttctc gaattaattt cctcagcacg
     4081 agcgcaaacc gtgcctgacg gaggaaaatt gcgcccgggg cgcggctgct ctgctgtgcg
     4141 cggtcttcct ccaactgctg cgccaaagcc gggcttgtcc gccattcggc ttccagcacc
     4201 atcgcatccg gcagaaattc gagtgacggc gcgactcgtt cca
//
LOCUS       DATDAJ010000224         3194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1261604, whole genome shotgun sequence.
ACCESSION   DATDAJ010000224 DATDAJ010000000
VERSION     DATDAJ010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261604"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1117
                     /gene="egtB"
                     /locus_tag="VIS53_05535"
     CDS             <1..1117
                     /gene="egtB"
                     /locus_tag="VIS53_05535"
                     /inference="COORDINATES: protein motif:HMM:TIGR03440.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HEY5767278.1"
                     /translation="EYAYLFNSYYNAAGDMHRRDLRGLISRPTLSQAQRYRASIDSHV
                     DDLLSNPDENLLDEIEPILVLGFHHEQQHQELLITDIKHVFAQNPLYPVFRSGRARHS
                     VRAEERTATECLSYQFVEFDVQIAEIGHDCDGFAYDNEGPRHQALVPAFSLATRPVTN
                     GEYIAFIEDNGYSRPEFWLSLGWMTVNEQRLDAPLYWTKRDGAWWNFTLSGLRPVDQS
                     EPVTHISYFEADAYANWAGARLPTEFEWECAAVDCPIEGNLVETELFHPAPVAVAPNA
                     FGAVSAQKPEQHRHLVQMFGDVWEWTRSAYSPYPGYHAAPGALGEYNGKFMCNQYVLR
                     GGSCATSRTHIRRTYRNFFQPEKRWQFTGIRLARDLA"
     gene            1167..2141
                     /gene="egtD"
                     /locus_tag="VIS53_05540"
     CDS             1167..2141
                     /gene="egtD"
                     /locus_tag="VIS53_05540"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:TIGR03438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEY5767279.1"
                     /translation="MTGDSTAAPPQVSAPESADFLADVIAGLSSNPRTIPCKYFYDER
                     GAALFQKICELPEYYVTRTEIDILDRNRADIASQLGPSVELIGLGTGAGTKTRILIEA
                     LENPAVYIPVDISEKQLRQSTALFQKIFPDLEILPVCADYLQSVVLPLPRHKPARNIV
                     YFPGSTIGNFEPDEAVQFLSRIAKVCRGGGGLLIGVDLKKDRQVLEAAYNDSAGVTAQ
                     FNLNLLQRINRELGADFDLDQWLHRAIYNSNAGRIEMHLISEIDQFVHFNEHKFHFRR
                     GEKIITEYSYKYAPDEFAAFAAKAGFNFVRMWTDEARLFGVFYFVTAT"
     gene            2221..2964
                     /locus_tag="VIS53_05545"
     CDS             2221..2964
                     /locus_tag="VIS53_05545"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY5767280.1"
                     /translation="MSALVKLEDVSKRYGDAIALHPTNLPVESGRTTVLIGPSGCGKS
                     TLLRIIIRLIEPDSGSIEFDGELVTPDNINALRRRIGYVIQEGGLFPHLTARANVLLM
                     ARHIGKSDGETHNRLLELSELTRFSEKLLPRYPVELSGGQRQRVSLMRALMLSPELLL
                     LDEPLGALDPLVRASLQKDLKEIFARLGQTVLFVTHDLAEAIYFADHIVLMNEGRIVQ
                     KGMITDLRERPADPFVFEFINAQRGVSPQ"
     gene            2961..>3194
                     /locus_tag="VIS53_05550"
     CDS             2961..>3194
                     /locus_tag="VIS53_05550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY5767281.1"
                     /translation="MKLHFKARSGGLQSAVGLRRPGSRRSLISAFLFLPTACMFAAPV
                     VIGSKKFTESYVLGEIAKHTLTDAGIPAEHRQGM"
BASE COUNT          706 a          928 c          835 g          725 t
ORIGIN      
        1 agaatacgct tacctcttca attcatacta caacgctgcc ggcgacatgc accggcggga
       61 tctgcgcggg ttaatctcgc gcccgactct gagccaagcg cagcgttatc gcgcatcgat
      121 cgattcacac gtcgacgatc tactttcaaa tcccgacgaa aatctgctcg atgaaatcga
      181 gccgattctc gtccttggct tccatcacga gcagcaacat caggaattgc tcatcacgga
      241 catcaagcac gtcttcgcgc aaaacccgct ctatccggta tttcgttctg gtagagcgcg
      301 tcactccgtg cgcgccgaag aacggacggc aacggagtgc ctttcctacc agtttgtcga
      361 attcgacgta caaatcgctg aaatcggcca tgattgcgac ggattcgctt atgacaacga
      421 agggccgcgg catcaggcac tcgtccccgc gttttccctg gcaacgcggc cggtcacaaa
      481 cggcgaatac atcgcgttca tcgaggacaa cggctacagc cgaccggaat tctggttatc
      541 gctcggatgg atgactgtga acgagcaacg cttggacgcg ccgctttact ggacaaaacg
      601 cgacggtgcc tggtggaatt tcacactctc cggtctacgc cccgtcgatc aatccgaacc
      661 tgtcacgcac attagctatt tcgaagctga cgcgtatgcc aactgggctg gggcacgcct
      721 tccgactgag ttcgaatggg agtgcgccgc agtggattgt ccgattgaag gcaatctcgt
      781 cgagaccgaa ttgtttcatc cggctcccgt tgctgtagcc ccgaacgctt tcggggctgt
      841 ctcagcgcaa aaaccagagc aacatcgaca cctggttcaa atgttcggcg atgtttggga
      901 atggacacgc agcgcttact cgccctatcc cggttaccac gctgctcccg gcgcgctcgg
      961 tgagtacaac ggaaaattca tgtgcaacca atacgtcctg cgcggtggct cctgcgccac
     1021 atcccgcact catatccgcc gcacctatcg caatttcttt caaccggaaa aacgctggca
     1081 gttcaccgga atcagactcg cacgcgatct agcatgaatt ggtagggcgc gaccgccggg
     1141 cgcgccgctt cttttccaac ctcacaatga ccggagattc aaccgcagct ccgccgcaag
     1201 tttccgcgcc agaatcggcg gattttctgg cggatgttat tgctggtctg tcgtcgaatc
     1261 cgcgcacgat cccgtgcaaa tacttctatg atgagcgggg cgcggcgttg tttcagaaga
     1321 tctgtgagct gcctgaatat tatgtcaccc gcaccgagat cgatattctg gatcgaaatc
     1381 gcgccgacat cgcctcacag ctcggaccca gcgtcgaact aatcggactg ggcaccggcg
     1441 ccggcacgaa aacgcggatt ctgatcgagg cgctcgagaa tcctgcggtt tatatccccg
     1501 tcgatatctc ggaaaaacaa ctgcgccaat cgactgctct tttccagaaa atttttccag
     1561 acctggaaat tctgccggta tgcgcggact acctgcaatc tgtggtgttg cctttacccc
     1621 gtcacaaacc tgcgcgaaac attgtgtatt tcccgggatc aaccattggc aacttcgagc
     1681 cggatgaagc cgtgcagttt ttgtctcgca tcgcgaaggt ctgccgcgga ggcggcgggc
     1741 tgcttatcgg cgtcgattta aagaaggacc ggcaggtgct cgaggccgct tacaacgaca
     1801 gcgccggcgt gactgcgcaa ttcaatctaa atttgctgca gcgcatcaac cgcgaattgg
     1861 gcgcagactt cgatctggat caatggctgc accgcgcaat ctacaattcc aacgccggca
     1921 ggattgagat gcatctcatc agtgaaatcg atcagttcgt gcatttcaac gaacacaagt
     1981 tccatttccg tcgcggggaa aaaatcatca ccgagtattc ttataaatac gcgccggacg
     2041 agtttgcggc gtttgctgcc aaagccggat tcaactttgt tcgcatgtgg accgacgagg
     2101 cacgtttgtt tggcgttttc tactttgtga cagcaacgtg aggcagacaa tcctgtctgc
     2161 ctgctgacgc gtttacagag ccattacttg caggcaggat ttcctgcatc acccatcaaa
     2221 atgagcgctc tcgttaagct agaagacgtc agcaaacgct acggtgacgc aatcgcacta
     2281 cacccgacga acctcccagt tgagtcgggc agaaccacgg tgctcatcgg accaagcggc
     2341 tgcggtaaat ctactttgct gcgaataatc attcgcttaa tcgagccgga ttccggctcg
     2401 atcgagttcg atggcgaact ggttacgccc gataacatca atgctttgcg gcgccggatc
     2461 ggttacgtga tccaggaggg cggcttgttt cctcatctaa ccgctcgcgc caatgttctt
     2521 ttgatggcgc gccacattgg aaaatccgac ggagaaacgc acaatcggct actggaattg
     2581 tccgagctga caagattttc agaaaagctg ctcccgcgtt atccggtgga actttccggc
     2641 ggccaacgtc agcgcgtcag tttgatgcgt gcgctgatgc tttcgccaga gttgttattg
     2701 ctcgatgagc cgctcggcgc gctcgacccg ctggtccgcg cttcgttgca aaaggatctc
     2761 aaggaaattt tcgcgcgact tggccagacg gtgctcttcg tgactcacga tttggcggaa
     2821 gcgatttatt ttgccgacca catcgtgctg atgaatgaag gccggatcgt tcaaaaaggc
     2881 atgattaccg atctgcgcga gagaccagcc gaccctttcg tgtttgagtt tatcaacgcc
     2941 cagcgcggag taagccctca atgaaattgc atttcaaggc aaggagcggc ggtctccagt
     3001 ccgccgtagg tcttcgacgg ccgggaagcc gtcgctcctt gatctctgcg tttctttttc
     3061 tccccacggc ctgcatgttt gccgcacccg tcgtcatcgg ttccaaaaaa ttcacggaat
     3121 cttatgtgct cggcgaaatc gcgaaacaca ccctgaccga tgcgggaatt ccggctgaac
     3181 accgccaggg catg
//
LOCUS       DATDAJ010000225         2995 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1262221, whole genome shotgun sequence.
ACCESSION   DATDAJ010000225 DATDAJ010000000
VERSION     DATDAJ010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262221"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VIS53_05555"
     CDS             <1..310
                     /locus_tag="VIS53_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767282.1"
                     /translation="SRGRHQSGKSALDAVTSRTHRRFWKEFNRLPGHIQCLAREKFQL
                     WLRDPFIHQCGSSRLLEMFGPVRIGDHYGALAQKHGELIVWFWIGTHEDYNNFIKQLR
                     "
     gene            489..1826
                     /locus_tag="VIS53_05560"
     CDS             489..1826
                     /locus_tag="VIS53_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767283.1"
                     /translation="MRRIFVFVLCGLLVSSGGAQAADGMNTVAERYAHLVLALGQHDP
                     DYVDAFYGPAEWKTQAEKEKKSLDVIGAEAAELLKKLSVERTAAPLVDSSDGGNSGDE
                     MLKLRREYLQKQISALAARVRTLKGEKLKFDDESRALYDAVAPTYRQSGSDPDSHFDQ
                     IIAQLEKKIPGNGPLWQRYEEWRKPFVIPKEKLDTVFQLAIKECRARTLAHVVLPPNE
                     SFTVEYVTNKPWGGYNWYKGNFHSVIQVNTDLPIFIDRAVDLAAHEGYPGHHVYNSLL
                     EKNLVRDRSWVEFSVYALFSPQSLIAEGTANFGREVAFTPAERMKFEKEVLFPAAGID
                     SKRADEYYAVQDLMKQLDYATNEVARRLINGEIDESAAVQWLQKYAVMDPARAQQRMK
                     FIQRYRSYVINYNLGEDMVRRYIEKRSGTDPGKRWSEFAKLLSSPRLPSGLTD"
     gene            1979..>2995
                     /locus_tag="VIS53_05565"
     CDS             1979..>2995
                     /locus_tag="VIS53_05565"
                     /inference="COORDINATES: protein motif:HMM:NF016817.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14 family metallopeptidase"
                     /protein_id="HEY5767284.1"
                     /translation="MHPANIPILGELTPGTTQRHLIKLPGAALANDEPRPVISVAGAK
                     PGPVLFVNAGVHGGEYPAVEAVIRLGKTLDPKKISGTVILMPVLNLPAFRARTPFVCP
                     IDNVNPNRVFPGDPRGSYSEQMTHACINEFVVHADAYVDLHGGDIPEALVPFVICRAG
                     DDEVAKKSKAIATAFGLPYVLTVSKPIQLAKGQSSYAAAADKGIPAILAEAGGVGQMQ
                     EEAVSLLVNGVVSVMRHLGMINDAKVEFHVETNSRPKPKKTARSAVATAKTSAADTAA
                     STVLTKFEWLYTKSTGVWYPKVAPGDVVNEGEQIGTVGDLFGDTLENVNSPVNGVVLF
                     LTINP"
BASE COUNT          716 a          771 c          872 g          636 t
ORIGIN      
        1 aagtagagga agacatcaaa gcgggaagag tgcgctagat gccgtgacat ccagaacgca
       61 tcgacgtttc tggaaagagt tcaatcggtt acccggtcac atccagtgcc tcgcgcgcga
      121 gaaatttcag ctgtggcttc gcgacccatt catccatcaa tgcggttcaa gccgcttgct
      181 ggaaatgttt ggtccagtgc gaatcggcga tcactacggc gctctcgccc agaagcacgg
      241 cgaactcatt gtctggtttt ggatcggcac gcacgaagac tacaacaact tcatcaagca
      301 gttgcggtag ccgctgagct attcgggcag cgtctcgccg gagccaccga ttgcggcagg
      361 ggccctctct ccttcgctgc taccctcgca gctttacctt ctatctcgga agtccccttc
      421 ctcgattcct gattcatcat tagtgtttct tcgtggtctt cgtgtcctct gtggtgaaag
      481 tttcttcaat gcgccggata tttgtcttcg tcctttgcgg tttgctagtg tccagcggag
      541 gcgcgcaggc ggcggacggc atgaataccg ttgccgagcg gtacgcgcat ctggtgctcg
      601 cgcttgggca acatgatccc gattacgtcg acgcgtttta cgggccggct gagtggaaga
      661 cgcaggcgga gaaagaaaag aaatcgctcg atgttatcgg cgcagaggcc gccgaactcc
      721 tgaagaagtt gagcgttgag agaacggctg cgcctttagt tgatagttct gacgggggaa
      781 attcgggcga tgagatgctc aaactgcggc gcgaatattt gcagaagcaa atttccgcgc
      841 tggcggcgcg ggtgcggaca ttgaaaggcg aaaaattaaa gttcgacgac gaatcgcgcg
      901 cgctttacga cgccgttgcg ccgacatacc gccagtccgg ctcggacccg gattcgcatt
      961 tcgaccaaat catcgcccag ttggaaaaga aaatccccgg caacggcccg ctctggcagc
     1021 gctacgaaga atggcggaag ccgttcgtga ttccgaagga aaaactcgat accgtgtttc
     1081 aactcgcgat caaggaatgc cgcgcccgga cgctggcgca cgttgtgctt ccgcctaacg
     1141 agagtttcac cgtcgagtac gtgaccaata agccgtgggg tggttacaat tggtacaaag
     1201 gcaatttcca cagcgtgatt caggtgaata ctgatctgcc catcttcatc gatcgcgcgg
     1261 tcgatctcgc ggcgcacgaa ggttatcccg gccatcacgt ttacaattcg ctgcttgaaa
     1321 agaacctcgt tcgcgatcgc agctgggtag agttttcggt ttacgcgctg ttctcaccgc
     1381 aatcgctcat cgccgaagga acggcgaatt tcggccggga ggttgcgttc acacccgccg
     1441 agcgaatgaa attcgagaag gaagtcttgt ttccggcggc cgggatcgat tccaagcgcg
     1501 cagacgaata ttacgccgtg caggatttga tgaagcagct cgactacgcc acaaacgagg
     1561 tcgcgcgcag attaatcaac ggtgaaatcg acgaaagcgc tgcggtgcaa tggttgcaaa
     1621 aatatgcagt gatggatcca gctcgcgctc agcagcggat gaaattcatt cagcgttacc
     1681 gaagttacgt gatcaactac aatctcgggg aagacatggt gcgacgttac atcgagaaac
     1741 gcagcggcac cgatcccggg aaacgctgga gcgaattcgc caaactgctt tcctcgccac
     1801 gattaccgag cgggttaacg gactaatcag gaacccagga atccaggaaa gggatttccg
     1861 agatagaagg taaaactgcg agggaagcag cgagcgagag cgggagccga gcgagtttca
     1921 aaccaggaaa gtgaataaat ctcctggatt catggtttcc agattccatc ttctttgagt
     1981 gcatccagcg aacattccga ttttgggcga actgacgccc ggcacaacac agcggcacct
     2041 gatcaaattg ccaggcgcag cgttagcgaa cgatgagccg cgaccggtaa tttcagtcgc
     2101 gggtgccaag ccgggaccgg tgttgttcgt caacgcaggc gtgcacggtg gcgagtatcc
     2161 tgcggtcgaa gcggtgatca gattgggcaa gacgctcgat ccaaaaaaga tttcaggcac
     2221 ggttattttg atgcccgtgt tgaatctgcc ggcgttccgg gcgcggacgc cgtttgtttg
     2281 tccgatcgat aacgtgaatc cgaaccgcgt gtttcccggc gatccgcgcg gcagttattc
     2341 ggagcaaatg acgcatgcgt gtattaacga attcgtcgtc cacgctgacg catacgtcga
     2401 ccttcacggc ggcgatatcc cggaagcact cgtgccgttt gtaatctgca gagcaggtga
     2461 cgacgaagtt gctaagaaat cgaaagcaat cgcgacggcg ttcggtttgc cgtacgtgct
     2521 cacggtcagc aaaccgattc aactggccaa ggggcaatcg agctacgcgg cagccgccga
     2581 caaaggaatt ccagcgattc tagcggaagc cggaggagtt gggcaaatgc aggaggaggc
     2641 cgtctcgctt ttagtgaatg gagttgtaag cgtgatgaga catcttggga tgatcaatga
     2701 tgctaaggtc gaatttcacg tcgaaacaaa ttcaagaccg aagccgaaga agacagcgcg
     2761 tagcgccgtg gctacagcaa aaacatctgc ggccgacacg gccgcctcta cagttttgac
     2821 gaagtttgag tggctttaca cgaaaagcac cggcgtgtgg tatccgaaag tggcaccggg
     2881 ggatgtcgta aacgaaggag aacagatcgg cacggtagga gatttgtttg gcgacacctt
     2941 ggaaaacgtt aattcgccag taaacggcgt tgtgttgttt ttgaccatca atcca
//
LOCUS       DATDAJ010000226         3378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1266675, whole genome shotgun sequence.
ACCESSION   DATDAJ010000226 DATDAJ010000000
VERSION     DATDAJ010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266675"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VIS53_05570"
     CDS             <1..586
                     /locus_tag="VIS53_05570"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5767285.1"
                     /translation="YNHFEIIGHQNLRTNRSLVIVANHCSHIDTLCLLAALPLRKLHR
                     AFPAAASDYFFQSVPRLWAAAILVNALPFARQARVRQSLSLCRELLGHPGTILIIFPE
                     GTRSTTGEVGEFKSGIGTLVAGRDVAVAPCFIDGSFQAWPKGKRFPRPRKVRLVVGTP
                     RNYRDRGTGKIDICAIAAELRNAVNELRSANESY"
     gene            573..2282
                     /locus_tag="VIS53_05575"
     CDS             573..2282
                     /locus_tag="VIS53_05575"
                     /EC_number="2.1.1.-"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF023569.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
                     /protein_id="HEY5767286.1"
                     /translation="MKATERTFSSWDGAELFYRSWIPKKATDKALLLFHRGHEHSGRW
                     QETVDSLDLDGIAIFAWDARGHGRSAGDRGAAKSLHDVIKDVDAFARHVSETFGVPIE
                     NMIVLAHSLAAVTVTAWIHDYAPPIRAMILATAAFHVRLYIPFAIPALRILRPRFVKS
                     YVKSKMLTHDREQAARYDSDPLIFRQIAVNVLLDLHDTSNRLLADAGAIQTPTLMIGA
                     GKDWVVSLKAQQKFFDRLSSTHKRFEIFPDAYHAVFHETNRRDVIGLVREFVQDCFAK
                     PATASSLVNADRSGYTAHEHECLKNHGSGRFAVARAGLKLAGRLSRGIEIGWRCGFDS
                     GLSLDYVYKNQPHGWTALGRLVDKSYLNSIGWRGIRERKGNLDKTLRDLILKIHRENR
                     PVRILDIAAGAGRYVIETIRDMPEIPIGATLCDYKQENVDAVRALADELNVNGAVIAH
                     LGDAFNRESLAEIQPRATIGIVSGLYELFPSNEPVLTSLRGLADAIEPGGYLIYTNQP
                     WHPQLEFIAHVLVNREGERWIMRRRTTAEMDELVRVAGFEKIDMEIDQWGMFTVSVAR
                     RGR"
     gene            2272..>3378
                     /locus_tag="VIS53_05580"
     CDS             2272..>3378
                     /locus_tag="VIS53_05580"
                     /inference="COORDINATES: protein motif:HMM:NF025736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY5767287.1"
                     /translation="MGVKRSKALVVSAGLSVLFLAVYSGCNWITGQRSDVASFYFEWE
                     HAIPFVPFMILPYMSIDLFFIAAPFLCRTEEELRIFSRRVTAAILIAGLCFLLFPLRF
                     AFPRPHAGGWLGAVFDWFRGVDAPYNLLPSLHATLTLILLDIYFRHTRGFVRVATMIW
                     FVLIALSPVLTYQHHVIDIVGGFVLAGYCFYLFRESSHAPPVVGNRRIGSYYAAGAAV
                     VLIMGAIFWPWGVLLLWQAIALGIVAIAYFRAGPSVFHKTEGKLPWSTRFVLAPCLLG
                     QYLSLLYYRTQCRSWDKVTPQIWIGGKLGRRSANKALCSGVVSVLDLSAEFSEAKPFR
                     KINYRNIPILDLTAPTQAQLVEMSKFIGDHSRNGA"
BASE COUNT          700 a          929 c          916 g          833 t
ORIGIN      
        1 ctacaaccat ttcgaaatta tcgggcatca aaatctgcgg accaaccggt cactcgtcat
       61 cgtcgcgaat cattgcagtc acatcgacac actttgtctg ctcgcggcgt tgccgctgcg
      121 caaattacat cgcgcgtttc cagcggccgc atctgattat tttttccaaa gcgtcccgcg
      181 actttgggcc gccgcgatac tcgtgaacgc gttgccgttt gccagacaag cgcgcgttcg
      241 acaaagcctg tcgctttgcc gggaattgct cggccatcca ggaaccatcc tgattatttt
      301 tccggaaggc acaaggtcga caaccggcga agttggcgaa ttcaaatcag gaatcggcac
      361 tcttgttgcg ggacgcgacg tcgcagttgc gccgtgtttt atcgatggat catttcaggc
      421 atggcctaaa ggcaaacgat ttccgcgccc gcgaaaagtt cgattggtcg ttggaacgcc
      481 tcgcaattat cgcgatcgcg gaacaggcaa gatcgacatc tgcgcaattg ccgccgaact
      541 acgcaacgcg gtgaacgaat tgcgctcagc aaatgaaagc tactgaaaga acattcagta
      601 gctgggacgg tgccgagttg ttttatcgct cgtggatccc aaaaaaggcg acggacaaag
      661 cgttgctgct ttttcatcgt ggccacgagc attccggtcg ctggcaagaa acggtcgatt
      721 cgctagacct tgatggtatc gcgatcttcg cgtgggacgc gcgcggtcat ggacgttcgg
      781 caggagatcg cggcgcggca aagagtcttc acgacgtgat caaagatgtg gatgcctttg
      841 cgcgtcatgt ttcggagacg ttcggcgtcc cgatcgaaaa catgattgtg ctcgcgcata
      901 gtctcgccgc cgtcaccgtc acagcctgga tccacgatta cgcgccgccg atccgcgcca
      961 tgattttagc cacggcagca tttcacgtga ggctctacat tccattcgca attccggcgc
     1021 tccgaatcct tcgaccgcga ttcgtaaaga gctacgtgaa atcaaaaatg ctcacgcacg
     1081 atcgtgaaca agccgcgcgc tacgattccg atccgctcat cttccggcaa atcgctgtga
     1141 acgtgcttct cgacctccac gacacctcga accggttgct tgccgatgcc ggtgcgattc
     1201 aaacgccgac gctgatgatc ggcgcgggaa aggattgggt tgtgagtctc aaagcacagc
     1261 aaaagttttt tgatcggctt tcttcaactc acaagcgctt cgagattttc ccggacgcgt
     1321 atcacgccgt ctttcacgaa acgaatcggc gcgacgtcat cggacttgtc cgcgagttcg
     1381 ttcaagattg cttcgcgaaa ccggcgaccg cgtcttcatt ggtaaacgcc gacagaagcg
     1441 gatacacagc gcacgaacat gagtgcttaa agaaccatgg cagcggaaga ttcgcagtcg
     1501 ctcgcgctgg actgaaactt gcgggtcgat taagtcgcgg catcgaaatc ggctggcgtt
     1561 gtggtttcga ttctggtctt tcgctcgatt acgtctacaa gaaccaaccg cacggctgga
     1621 ccgcgcttgg ccggcttgtc gacaaatcgt acctgaacag catcggctgg cgcggcatcc
     1681 gggaacgcaa agggaatctg gataaaactc tgcgcgatct gattctaaaa atacatcgcg
     1741 agaatcgccc ggtgagaatt ctcgatatcg ccgcaggtgc tggccgttac gtaatcgaaa
     1801 cgatccgcga catgccagag attccgatcg gtgccacgct ttgcgattat aagcaggaaa
     1861 atgtcgatgc cgtgcgcgct ctggccgacg agttaaatgt taacggcgca gtaatcgcgc
     1921 acctcggcga cgcgttcaat cgcgaatctc tcgccgaaat tcaaccgcgc gcgacgatcg
     1981 gaatcgtttc agggctttat gaattgtttc catcgaacga gccggttttg acttcgttgc
     2041 gcggattagc cgacgcgatc gagcctggag gttacctcat ttacacaaat cagccctggc
     2101 atccgcagct cgaattcatt gcacatgtcc ttgttaatag ggaaggtgaa cgctggatca
     2161 tgcgccgtcg gacgacggcc gagatggatg aactggttcg cgtcgccggc ttcgaaaaga
     2221 tcgatatgga aatcgatcag tgggggatgt tcaccgtttc tgtcgcacgt cgtgggcgtt
     2281 aaacgtagca aggcgctcgt cgtctcggcc ggattgtcgg tcctgtttct ggccgtctac
     2341 agcggttgca attggatcac gggacaacgc agtgatgtcg cctcgttcta ttttgaatgg
     2401 gagcatgcaa ttccgttcgt tcctttcatg attcttccct acatgtcgat cgacctcttc
     2461 ttcatcgcgg ctccgttcct ttgtcgaaca gaagaggagc tccggatttt ttcacggcgg
     2521 gtcaccgccg caattctcat tgcagggctt tgttttctgc ttttcccgct gcgttttgct
     2581 ttcccgcgcc ctcacgctgg cgggtggctc ggcgcggtct tcgattggtt tcgcggagtg
     2641 gatgcgccgt acaatctact tccatcgctt cacgcgacgc tcacgctaat tctgctcgat
     2701 atttattttc gtcatacgcg cggtttcgtt cgtgttgcga ctatgatctg gttcgttctg
     2761 atcgcgttgt cgccagttct cacgtatcaa caccacgtca tcgacatcgt cggcggtttt
     2821 gttctggccg gatattgctt ctatcttttt cgagagtctt cgcacgcgcc gccagttgtg
     2881 gggaatcgcc gcatcggttc gtattacgca gcgggagcag cggttgtctt gattatgggc
     2941 gcgatctttt ggccatgggg agtcctcctt ctttggcagg cgatcgctct cggcatcgtg
     3001 gcgatcgcgt acttccgagc aggtccgagc gtttttcaca agaccgaagg aaagttgccg
     3061 tggagcacgc ggtttgtgtt ggcaccttgt ttactcggtc aatatctgtc gttgctgtat
     3121 taccggaccc aatgtcgatc gtgggacaag gtcacaccac aaatctggat tggcggcaaa
     3181 ctggggcgcc gttctgcgaa caaagctttg tgctccggag ttgtctctgt acttgatttg
     3241 agcgctgaat tttccgaggc gaaaccgttc cgcaaaatca attatcgaaa tattcccatc
     3301 ctggacctga ctgctcccac ccaggcgcaa cttgtggaga tgagcaaatt catcggcgat
     3361 cactcccgaa acggtgcc
//
LOCUS       DATDAJ010000227         2883 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1278634, whole genome shotgun sequence.
ACCESSION   DATDAJ010000227 DATDAJ010000000
VERSION     DATDAJ010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1278634"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..313)
                     /locus_tag="VIS53_05585"
     tRNA            complement(240..313)
                     /locus_tag="VIS53_05585"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(277..279),aa:Asp,seq:gtc)
     gene            complement(347..583)
                     /locus_tag="VIS53_05590"
     CDS             complement(347..583)
                     /locus_tag="VIS53_05590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767288.1"
                     /translation="MFDATHLQNVQPTATVNIAEKSNFKLQSSWEVRSEKLNIQTREC
                     PVGALKILGNWIWDLEFPDESQIPRDWTWSRKLQ"
     gene            642..773
                     /locus_tag="VIS53_05595"
     CDS             642..773
                     /locus_tag="VIS53_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767289.1"
                     /translation="MSDERSEGLQGGEGDPGPENLLDSFDQMIGSLPPGDPVRRELL"
     gene            807..2324
                     /locus_tag="VIS53_05600"
     CDS             807..2324
                     /locus_tag="VIS53_05600"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5767290.1"
                     /translation="MIEARRMIEKLEEVVKKVTSPANRIGTFLGATSKETAHIVVGGA
                     DYYCNVDPRIPLSRLKKGTRVLVNEAFVIVGDLGFETAGPVTKITEVIGKDRLRVGSE
                     HGLHSMVLQRSSELVHSNLKSGDEVRVDSNYRMALEMLSSTKSDEYYLDTVPELPWER
                     VGGQETALQAIKDAIELPLLHPDLFTKFQHATPKGFLLYGPPGCGKTLIGKATAFNLT
                     KQLGAKSGTEMREYFMHVKGPEILNMWVGESERMVREIFATAREKRKEDFMPFLFIDE
                     AESILGTRRASRHSNILSTLVPMFCSEMDGIDSLNDVVIILASNRADLIDPAILRPGR
                     IDRKIKVNRPDKEGTREIYRIYLTDNLPYDGVLAKEADGIGASIERLIERFVEWQFTR
                     RDENKFLEVTLRSGRKETLYRSDLISGAIIASIVERAKAIAIKRAIGTQQDQGIRETD
                     LQLAFNAEYAENDIFPATDITEDWLKLIDYDPENVVKISPVRPVSDSLMRTTSVI"
     gene            2410..2880
                     /locus_tag="VIS53_05605"
     CDS             2410..2880
                     /locus_tag="VIS53_05605"
                     /inference="COORDINATES: protein motif:HMM:NF013921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY5767291.1"
                     /translation="MLLPWEKSIIYFVTICVKDRRKVLATPEVFEAIKTAVPQLQRWH
                     VLAGVIIPDHVHWVVSPVEDQQLSVGDFSHGFKRILRKQLGPQPWEWQRGCFDRLLRS
                     DENVWSKWIYVKDNPVRHGFVQAADDWPYYLDFINELPHSGSCQLPLQVKSVGA"
BASE COUNT          708 a          736 c          798 g          641 t
ORIGIN      
        1 aggcgccgga gatctcagtt caggttccat cgatgccgga gtttcctggc gccacacgtt
       61 tacccaagcc gggggctttc agtattactg cacctttcat cctgagatga agggcacggt
      121 cgtcgtcaag tagcaaagga aggtctcact ccggaatacg tgatcgcatg cgcgcgattt
      181 tgattacgtc gaatgtggcc taacgagtca gaaattatta aatgttaata caaaaacccc
      241 ggagcctacg gggctcgaac ccgcaacctc cgccgtgaca gggcggcgct ctaaccaatt
      301 gagctaaggc tcccgacgag aaagcgaacg ttaacggcct ggcggtttac tgcaacttac
      361 gcgaccaagt ccagtctcgc ggaatttgcg attcgtcggg aaattccaag tcccaaatcc
      421 aattcccgag aatcttcagt gcacctacag ggcattcgcg ggtttgaatg ttgagctttt
      481 cggatcggac ttcccatgat gattggagtt tgaaattgga cttttccgcg atgtttaccg
      541 tcgcggttgg ttgaacattt tggagatgcg tagcgtcgaa cattgcgaac acacctgatg
      601 acggtatact taactcggtt cggcggattg acccaaacca aatgagcgac gagcgcagcg
      661 agggattgca gggaggggaa ggagaccccg gtccggaaaa tctcctcgat tcattcgatc
      721 aaatgatcgg atccctgccg ccgggcgatc cagttcggcg tgaattgttg tagctgcgcc
      781 ctgagattct cgatcagcag gaaacgatga tcgaagcgcg gcggatgatt gagaagctcg
      841 aggaagtcgt caaaaaagtg acttctcccg caaatcggat cggcacgttt ctcggcgcca
      901 cttcgaagga gaccgcgcac atcgtggttg gcggcgcaga ttattattgc aacgtcgatc
      961 cgcgcatacc gctctcgagg ttaaaaaaag gtacacgcgt tttggtcaac gaagcattcg
     1021 tgatcgtcgg tgatctggga ttcgagactg ccggcccagt gacgaaaatc accgaggtaa
     1081 ttggtaaaga cagattgcgc gtaggctcgg aacacggctt gcattcgatg gtgctgcagc
     1141 gctcctcaga acttgtccat tccaacttga aatcgggcga cgaagtccgc gttgattcca
     1201 attatcgcat ggcgttggag atgctctcga gcaccaaatc ggacgaatac tatctcgaca
     1261 cggtgccgga gttgccgtgg gaaagagtcg gcggccagga aacggcgctg caagcaatca
     1321 aggacgcgat cgagttgccg ctattgcatc ctgatctttt cacaaaattt cagcatgcta
     1381 cgcctaaagg ttttctgctt tacggcccgc ctggctgcgg caagacgctc atcggcaagg
     1441 caactgcatt taatttgacg aagcagctcg gcgcaaaaag cgggactgag atgcgcgaat
     1501 atttcatgca cgtgaaaggt cccgagatcc tcaacatgtg ggtaggcgaa tcggaacgaa
     1561 tggtgcgcga aatctttgcc accgcgcgcg agaaacgaaa agaagatttc atgccgttcc
     1621 tttttatcga tgaagccgaa tcgatcctcg gcacacgacg cgcatcgcgg cactcgaaca
     1681 ttctgtccac gctggtgccg atgttctgct cggagatgga cggaatcgat tcgctcaatg
     1741 acgttgtcat cattctcgct tcgaaccgcg cggatctgat cgatccggca atcttgcgtc
     1801 cgggccggat cgaccgaaaa attaaagtca atcgtccaga caaggaaggc acacgcgaaa
     1861 tctaccgcat ctatctcaca gacaatttgc catacgatgg cgtgctcgcg aaagaggctg
     1921 atggaatcgg cgcgtccatc gaacgcttga tcgagcggtt tgttgagtgg caatttaccc
     1981 ggcgtgatga aaataaattt ttggaagtga ccctgcgcag cgggcgcaaa gaaacgcttt
     2041 accgcagcga tctcatcagc ggcgcgatca tcgcctcaat cgtggagcgc gcgaaagcga
     2101 tcgcgattaa acgggccatc ggaactcaac aggaccaggg aattcgggaa acggacctgc
     2161 aactcgcctt taacgcggag tacgcggaga acgacatttt tccggccacc gacattaccg
     2221 aggattggct gaagctcatc gattacgatc cggaaaacgt tgtgaagatt tcaccggtca
     2281 ggccagtgtc ggattccctc atgcgcacaa cgtcggtgat ctaatgcgcg cccaaagacg
     2341 gtaattccag actgtagggg aagctgacag cttcccgtgc gtatggccga acctccacgt
     2401 ttaccagcaa tgctcctacc ttgggagaaa tcgatcattt attttgtcac catctgcgtg
     2461 aaagatcgac gcaaggtact ggcaacaccg gaagtgtttg aagccatcaa aactgcggtt
     2521 ccacaactgc agagatggca cgtattggcg ggtgtgatta tacccgatca cgtccactgg
     2581 gttgtttctc ccgtcgagga tcaacagttg tcggtcggag atttctcgca cgggttcaaa
     2641 cgcatattgc gaaagcagct tggtccacaa ccatgggaat ggcagcgcgg atgtttcgat
     2701 cgcctgctgc gttccgacga gaatgtgtgg agtaaatgga tttacgtgaa ggataacccg
     2761 gtgcgacacg ggtttgttca ggccgcggac gattggccat actatttgga tttcattaat
     2821 gaactccccc actcgggaag ctgtcagctt cccctacagg taaagagtgt tggggcatga
     2881 tga
//
LOCUS       DATDAJ010000228         2367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1279201, whole genome shotgun sequence.
ACCESSION   DATDAJ010000228 DATDAJ010000000
VERSION     DATDAJ010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1279201"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VIS53_05610"
     CDS             complement(<1..553)
                     /locus_tag="VIS53_05610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767292.1"
                     /translation="MERSNSEERDQIDRPPGPPEDEAGSEPGTSSEAFQSDDWWRESA
                     PESDWAQPVSNAAATEIGQRKEVGTADVYFCGRTNLFPLNLAIRAIGKENLTGLLRAR
                     WDQEPVDVLARDGEILFATTRDLDLYCPETPPIAANVDPEVVANARDQQKENGTPFLL
                     TLARSESIERQPAFDLIRQQGQLL"
     gene            complement(638..2071)
                     /locus_tag="VIS53_05615"
     CDS             complement(638..2071)
                     /locus_tag="VIS53_05615"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY5767293.1"
                     /translation="MKHTDPLLLAWQTTISRKGDDAAVFDTTGTIARSFRDIEGLADA
                     FEAKMDKLLPGAVVAVQIGNHKDWPAVFIACLRKQLVVLPLDQTIGEQQRDTALEISR
                     ASALVSAVPSENSPQIIQLRTADTDWGEDVPSLLKLTSGTTAAPRAIRFRSHQLLADC
                     SQICDTMGISDDDLNFGVIPISHSYGFSNLLTPLTARGVPMVVSRDTTPRAVLADLAR
                     TGATVFPGTPAFYQAFCEIGDVPPLPKLRLCISAGAPLSSAVAKKFFEKFRQPIHSFY
                     GASECGGICYDRHCTTFEDGLVGEPMQGVEIDLIDPTESASQIRVRSVAVSDGYFPEP
                     DEQKLGNGVFVPDDLLERHDSALRIVGRISDVINVAGKKVNPAEVEAHLLRFKGVRQA
                     VVFGRPTGAGLRNEEVAACVLASPDVSESDLLRFCRTALSGWQVPKRIFIVDIIPTNE
                     RGKISRRDLARQFSEGHESSPLRTLAS"
     gene            2122..2349
                     /gene="rpmE"
                     /locus_tag="VIS53_05620"
     CDS             2122..2349
                     /gene="rpmE"
                     /locus_tag="VIS53_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEY5767294.1"
                     /translation="MKAGIHPEYYETDMVCACGTVYHTRSTRRDIKIGICAACHPFFT
                     GEQKFVDTAGRVEKFARRYGSTKAARAEKKA"
BASE COUNT          507 a          666 c          655 g          539 t
ORIGIN      
        1 agagcagttg gccctgctgg cgaatcaaat cgaacgccgg ctgtcgctcg atcgactcgc
       61 tgcgggcaag cgttagcaga aaaggagttc cgttttcttt ctgttgatcg cgggcgttgg
      121 caacgacctc tggatcaacg tttgcggcga tgggtggagt ttccggacaa tagagatcca
      181 agtcccgggt tgtggcgaaa agaatctcgc cgtcacgggc gagaacgtcg accggttcct
      241 gatcccagcg ggctcgtagc aacccggtca ggttctcttt cccgatggct cgtatcgcaa
      301 ggttcaaagg aaacagattt gtgcggccgc aaaaataaac atcagccgtg ccgacttcct
      361 ttcgctgccc gatttctgtg gctgcagcgt ttgagaccgg ctgggcccaa tcggactcgg
      421 gcgcggattc tcgccaccag tcgtcggact ggaaagcctc ggaactcgtg ccgggctcgg
      481 accctgcctc gtcctcgggc gggccgggtg gtctgtcgat ctggtcgcgc tcttcgctgt
      541 tcgaacgttc catttgggct tttagtagct tgggtttggg ggctgctgtc gccgcaactg
      601 ttctgtcact gtaagcaaac cccttatcaa ggctttatca agaggccaat gttcgcaacg
      661 gagaactctc atgcccttct gagaattgcc gcgccaggtc tcgtctgctg attttgccgc
      721 gttcgtttgt gggaattatg tcgacgataa agattcgttt cggcacctgc catccgctca
      781 atgcagtgcg gcaaaatcgt aaaagatcgc tttcgcttac gtccggcgat gccagcacgc
      841 acgccgccac ttcttcattt cgcaatcctg cacctgtagg acggccaaaa acgaccgcct
      901 gccgaactcc cttaaaacgc agcagatgcg cttctacctc cgccggattc actttctttc
      961 cggcgacgtt gattacgtcc gaaatccggc ccacgatcct cagagcggaa tcgtgtcgtt
     1021 cgagcagatc gtccggaaca aaaacgccgt tgccaagctt ctgctcgtcg ggctcgggaa
     1081 aatagccgtc gctcactgct acgctgcgaa cgcgaatctg gctggcggac tccgttggat
     1141 cgataaggtc aatttcgacg ccctgcatcg gctcgccgac aagaccgtcc tcgaatgttg
     1201 tgcagtggcg atcgtagcaa attccgccgc attccgatgc gccgtagaag gaatgaatcg
     1261 gctgcctgaa tttctcgaaa aactttttcg cgacggcgct ggagagcggc gcaccagcag
     1321 aaatgcacag ccgaagtttt ggtaacggcg gcacatcacc aatctcgcaa aacgcctggt
     1381 aaaaagccgg cgtaccggga aaaactgtcg cgcccgtgcg cgcaagatcc gcaaggacgg
     1441 ctcgcggtgt tgtgtcgcgg ctcacaacca ttggcacacc gcgcgccgtc aatggtgtaa
     1501 gcaaattgct aaacccatac gagtgtgaga tcggaatcac cccaaaattc agatcgtcat
     1561 ctgaaatgcc catcgtgtcg caaatctgac tgcaatcagc cagcaattga tgactgcgaa
     1621 atcgaatcgc acgcggtgct gccgttgtgc ccgaggtaag ttttaagagt gagggtacat
     1681 cttcgcccca atctgtgtcg gctgtcctta gctgaattat ctgcggagaa ttttcgctgg
     1741 ggaccgcgga cactagagcg ctcgctctgg aaatctccaa cgctgtgtcg cgttgttgtt
     1801 ccccaatggt ctggtccagc ggcaaaacaa ccagctgctt gcgcagacac gcgatgaaaa
     1861 cggcaggcca atctttgtgg ttgccaattt gcacagccac gacagccccg ggaaggagct
     1921 tgtccatttt ggcttcgaaa gcatctgcga gcccttcaat gtcccgaaag ctccgcgcga
     1981 tcgtgccagt tgtatcgaaa acggcggcgt cgtcgccttt gcgtgagatc gtcgtctgcc
     2041 atgcaagtag cagtggatcg gtatgtttca tcgcttgcaa aaaccggagg tcgcgaatac
     2101 attccgcgct ccatttagaa gatgaaagca ggcattcatc cagaatatta cgagactgat
     2161 atggtgtgcg catgcggcac ggtgtatcac actcgttcca cgcgtcgcga tattaagatc
     2221 ggcatttgtg ccgcttgtca tccctttttc acgggcgaac aaaagtttgt cgataccgcg
     2281 ggccgggtcg agaaatttgc tcgacgttac ggcagcacca aagctgctcg cgccgagaag
     2341 aaagcttagc tcgttgtaga ggcgttc
//
LOCUS       DATDAJ010000229         2169 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1288859, whole genome shotgun sequence.
ACCESSION   DATDAJ010000229 DATDAJ010000000
VERSION     DATDAJ010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1288859"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /locus_tag="VIS53_05625"
     CDS             <1..590
                     /locus_tag="VIS53_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767295.1"
                     /translation="MLHLTEEEPSSEHLDNQVQKAQEQLLQLKRQQEQIEKQKRELEE
                     LSRRQDELEQGRGEMTDKMTRALVVLEREAYNAQSRLEQIRVARESFAQHLELVEAID
                     PRNWNPSDLHKELSRALSTVDDARTEYNEHRSRLQAGGSGNGEQSLPDAAPSAYENSD
                     GRSFSTWLQIGLALTLPLIIFGVIAIAVFAWLASR"
     gene            596..961
                     /locus_tag="VIS53_05630"
     CDS             596..961
                     /locus_tag="VIS53_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767296.1"
                     /translation="MFRRSRKPAPPLYRKQQEIAQQEAQLREKVESLQRIVTQSRAPA
                     QNKSSPRKRDRSATKDVAEKRFHVSIAMETPQVFDTDQRRQRHRPLRKERRQGQIVFL
                     VLLVALGIAVMLLISHLHP"
     gene            971..1261
                     /gene="gatC"
                     /locus_tag="VIS53_05635"
     CDS             971..1261
                     /gene="gatC"
                     /locus_tag="VIS53_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEY5767297.1"
                     /translation="MAGTSDLDVAYVARLARINLTEDEAKTFQKQLDDVLKYVEKLRQ
                     LDVTGIDAAAHALPVFNVFREDAPRDWFTAEQALSNAPRQANGLFVVPKVVE"
     gene            1258..>2169
                     /locus_tag="VIS53_05640"
     CDS             1258..>2169
                     /locus_tag="VIS53_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY5767298.1"
                     /translation="MIGNELTAMSIADLQLLLRRREVSPRDVINGLRERIEAVDGDIG
                     AYLALDIEAAMKEAEHVNVDLPLGGIPIAIKDIINVMGQACTCASKILNGYRTLYDAT
                     VVQKLRAAGAIPFGKTNLDEFAMGSSTENSAVKSTRNPWDLSRVPGGSSGGSAAAVAA
                     DEAFGALGSDTGGSIRQPAALCGVVGLKPTYGRVSRFGLVAFASSLDQIGPVTKTVRD
                     AALIMSAIAGHDPQDSTSLNEPVPDYSASLGNDLRGVRLGVPKEYLIEGIDPQVRAAV
                     DAAVKQFDSLGAEIIEVSLPSTEYAVAV"
BASE COUNT          505 a          596 c          649 g          419 t
ORIGIN      
        1 aaatgctcca cttgaccgag gaagagccgt cttccgagca tctggataat caggtgcaaa
       61 aagcgcagga gcaactcctc caactcaagc gccagcagga gcagatcgag aagcaaaaac
      121 gcgaactgga agagctaagc cggcgccagg acgaactgga acagggccgt ggcgaaatga
      181 ctgataaaat gacgcgcgcg ctggttgtgc ttgaacgcga agcgtacaac gcgcaaagca
      241 ggctggagca aatccgtgtg gcccgcgaga gtttcgccca acatttggaa ttggtggaag
      301 cgatcgatcc gaggaactgg aatccatcgg atttgcacaa ggagctgagc cgggcgttga
      361 gcacggtcga tgacgcccgc accgagtaca acgaacaccg cagccgattg caagcaggcg
      421 gcagcggtaa cggcgagcag tcgttgcccg atgccgctcc gagtgcttac gaaaacagcg
      481 atggacgctc attttccacg tggttgcaga tcggcctcgc gctgactttg ccgctgatca
      541 tctttggcgt cattgccatc gccgtttttg cctggctggc cagtcggtga tggcgatgtt
      601 tcggcgttcg cgcaaaccgg ccccgccgct ttaccgcaag caacaagaaa tagcgcaaca
      661 agaagcgcag ttgcgcgaga aggtcgaaag cctgcagcgc atcgtcacgc aatcgcgggc
      721 gcctgcgcag aacaaatctt caccgcgaaa gcgggaccgc agcgcaacca aagatgttgc
      781 cgaaaagcga tttcacgtct caatcgcaat ggaaaccccg caggtgtttg acaccgacca
      841 aaggcgccag cggcatcgtc ccttgcgcaa agagcgacga cagggacaga tcgtttttct
      901 ggttctttta gtcgcgttag gaatcgcggt catgttgctc atcagccatt tgcatccctg
      961 agcgtctgac atggccggaa cttccgatct tgatgtcgcg tacgttgcca ggctggcacg
     1021 gatcaatctg acagaagacg aagcgaaaac tttccagaaa caactcgatg acgtgctgaa
     1081 atacgtcgaa aaacttcgcc agttagacgt cactggcatt gacgccgccg cgcatgcgct
     1141 accggttttt aacgtgttcc gcgaggatgc gccacgcgac tggttcacag cagaacaggc
     1201 gttaagcaac gcccctcgcc aggcaaacgg cctttttgtc gttccgaaag tagtggaatg
     1261 atcgggaacg agttgacggc gatgagcatc gccgatctgc aattgttgtt gcgtcgccgc
     1321 gaagtttcgc cgcgggacgt gatcaacggt ttgcgagagc gcattgaggc ggtggatgga
     1381 gacatcggcg catatcttgc actcgacatc gaagcagcga tgaaagaggc ggagcacgtg
     1441 aacgtcgatc ttcctctcgg cgggattccg attgcgatta aagacattat caacgtcatg
     1501 ggtcaggcgt gcacgtgcgc gtcgaaaatc ttgaacggct atcgcacgct gtacgatgcc
     1561 acagtggtgc aaaaattgcg cgcagcgggc gcgattccat tcggcaaaac caacctggac
     1621 gagttcgcca tgggctcatc cacggaaaat tcggcggtga aatcgacgcg caatccgtgg
     1681 gacctgtcgc gcgtgccggg aggatccagt ggcggttcgg cagcagccgt tgccgcagat
     1741 gaagccttcg gcgcgcttgg ctccgacacg ggcggttcga ttcggcaacc ggctgcgcta
     1801 tgtggtgtcg tcgggctcaa gccaacttac gggcgagttt ctcgcttcgg ccttgtggcg
     1861 tttgcttcgt cactcgacca aattggaccg gtaacaaaaa ccgtgcgcga cgccgcgctc
     1921 atcatgagcg ctatcgcagg tcatgacccg caagattcca catcgctcaa cgagccagtt
     1981 cccgactata gcgcgagcct cggaaatgat ttgcgcggcg tccgattggg cgtgcccaag
     2041 gaatacctga tcgaaggaat cgatccgcag gtgcgagctg cagtggatgc cgcagtgaaa
     2101 cagttcgatt cgctgggagc ggagattatt gaggtctcat tacccagcac tgaatatgcg
     2161 gtcgcggtt
//
LOCUS       DATDAJ010000230        10054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1312220, whole genome shotgun sequence.
ACCESSION   DATDAJ010000230 DATDAJ010000000
VERSION     DATDAJ010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10054
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1312220"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1154
                     /locus_tag="VIS53_05645"
     CDS             <1..1154
                     /locus_tag="VIS53_05645"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY5767299.1"
                     /translation="VEQECTSYWLISCEGAHSVIREQAGFRFVGKTYPLSFLLVDARL
                     EGRLRHGENYVWLHKNGSFAALPLPTPQTWRVFVDVTNARNLGEVSLDLIRRLMIERT
                     GAAEIKIHNPTWISEFRIHCRLVDRYRLGRVFVAGDTAHVHSPTGGQGIVTGIQDAVN
                     LAWKLGRVLRGAPEDLLDTYEEERRPKAAEVLKETDRTTRLLLAPDSITKLIRDLIVL
                     PVMRSEFVQRKLFAKLAQLHVNYRGNTLSRHNESISIRTVLKAGDRAPDVAFRHKDKI
                     VTLFELLRPFRPIALARFEGKTSQAQIDRIKTRLRVADITMYVIAERGSDSLLDPDCL
                     IDIYSDFARLYGMRTEYFCLIRPDDHIGLFQSPIDEDEIADYVARISAS"
     gene            complement(1172..1753)
                     /locus_tag="VIS53_05650"
     CDS             complement(1172..1753)
                     /locus_tag="VIS53_05650"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY5767300.1"
                     /translation="MAAQEVSRPVFLPVIIGTPRQGRLTEPAANFVFGEASKRSDIKT
                     ELIDIRKIPIRMDDAGEALKDSEFCATVERADGLIIVAPEYNHSFPGLLKHVLDTNLK
                     EYIHKAVGVCGVSAGPFGGARMIQSLVPVLRELGLVTIFSDVYFGTAGKLFDPVTGKI
                     TDPAYIRRVEKFLNELVWMSRVLRFGRENIPAA"
     gene            1844..1925
                     /locus_tag="VIS53_05655"
     tRNA            1844..1925
                     /locus_tag="VIS53_05655"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1878..1880,aa:Leu,seq:tag)
     gene            2167..4626
                     /locus_tag="VIS53_05660"
     CDS             2167..4626
                     /locus_tag="VIS53_05660"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HEY5767301.1"
                     /translation="MKGISVSFEAANIQSAAGNGNIRSAVFDRRLLIIGLWVFAGYYL
                     GCKIGFALTFQPHPVSVLWPPNSILVAALLLTPPRSWWVVLLAALPAHLAAQLQSHVP
                     PLMIFCWFLSNSCEALIGAGLMRYLVGGPIRFITLRNVGLFCLCVVFIAPFLSSFLDA
                     ALVVWNHWGEDTYWELIRVRLFSNALAALIIVPLVVTWATTEIQPLRTARLSRYLEAC
                     ALFVGLLLVSYAVFYKFGSGVDSALLFLPLPFLLWAAVRFGSLGASTAVSIVSFLAIW
                     SAAHGHGPFSGGPAEQDALSIQIFLIVLAIPLLFLATVIEERTTGATELGESESRFRN
                     VANAAPVFIWMAGLDKLCTFFNKPWLEFTGRSIEQELGNGWAEGVHPDDLQKCLEVYT
                     EAFDARQPFVMQYRLRRNDGEYRWLSDQGVARHDAQGGFAGYIGSCVDITELMKKEEA
                     LHEFEERVVLAAEAAHLGVWEMDPGTNELWMSDSARTLFQFDSEIALDHAAFQGRVHP
                     EDRALRDSAVKRAIETGGGYEIEYRVLLPDGTLRWIGARARCVAGDNRKGARLIGVSI
                     DITPRKLAEAEALRQRDELSHLSRVALMGEMSASIAHELNQPLAGILSNAAAGQRFID
                     RGDVDQGEIRELLGDIIADGRRASEIVRGIRGMVKKEQVERRSVNLNEVVVDTVRMIS
                     HDAVLRSCQVETSLDASLRAIEADPVQLQQVLLNLVINAFDAMRDTPISRRKVVIATQ
                     SNGDDTVCASVRDYGVGISAEMQDTLFDPFFTTKKEGLGMGLAIARSILESHGGTIAG
                     KNADAGGAQFEFVLPVNGPSA"
     gene            4746..5123
                     /locus_tag="VIS53_05665"
     CDS             4746..5123
                     /locus_tag="VIS53_05665"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5767302.1"
                     /translation="MLAPRPDRICLLDDDASVLRGLNRLLMSAGWHPEQFSEPDPFLN
                     YVKVHRPTIAIIDVWMPLMNGLEVQSRVRELSPSTRVIMFTGKDDPLVRSTSLKAGAS
                     AFFTKPFDDEEFLTAIRLALSAM"
     gene            5364..6383
                     /locus_tag="VIS53_05670"
     CDS             5364..6383
                     /locus_tag="VIS53_05670"
                     /inference="COORDINATES: protein motif:HMM:NF004785.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5767303.1"
                     /translation="MKSLFLSSIAILTGLFVLAWSFMLAETFTEGVRVSPETLTLKPG
                     QYVWEPERAPEGPLLIVASITEQVAYVYRNGICIARSSVSTGRPGHPTPTGVFTILEK
                     EVHHTSSIYKGAAMPYMERVTWGGIALHAGDLPGYPDSHGCVRLPLEFSKLLFGVTMK
                     GATVIIADAHSAPATTVHPGLFFSQSGQESEPITAGKFDWDPDKSPSGPVSVIASSVD
                     KTVYVYRNGVEIGRAGIPNPQVILPLDDLVFSAMQGTDADGHLRWAEVTATGESKSNQ
                     SVFLTVQKSGLPPEFLDKAKSVITPGATLIFTDRPVDPSTQSPPNFQILVAQKDKPEK
                     SSQLQ"
     gene            6529..7293
                     /locus_tag="VIS53_05675"
     CDS             6529..7293
                     /locus_tag="VIS53_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767304.1"
                     /translation="MIISSIAAILFAVLVGVTVVGARLRRLVPAEHLSTDSKDAVKLA
                     LGLVATMTAILLGLLVSSAKSSFDTARSEVMQMAAKIALLDRVLVLYGPQTLEARRAL
                     RDSVAEAVGRTWPAEGRRPVRLDPNEQMGDAVYAAISSLAPQDDAQRVLKTEAAKLMI
                     ELAELRALVQAQGVSSVSTPLLIALVIWLVVIFLGFSLLAPGNATSTLALIAGAFSVA
                     CAVFIILELDHPFAGVVRVPGAPMIKTLAHLSKDTS"
     gene            7344..8162
                     /locus_tag="VIS53_05680"
     CDS             7344..8162
                     /locus_tag="VIS53_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767305.1"
                     /translation="MFIERMCVVSKLLQWLFIVTLLLLAYDHGVAAEPGPNPTTADEL
                     KQLNDPTLLATHVSLESEWDQFKDGAERANWTFTGLWGWRVSDSQDWAIRFKLPFVYD
                     RTTPGLDHLDTGGVGDVELGTGTAFRLSHKWRMAGGIELHADTASDPSFAESVWRLKW
                     GWGIAHDFSHWLSLSPNVEYNRSIAEEDDVRPQSYLDMSVPATFILPQHWSVSAKYRT
                     LLDFNNGDRWAHSLTAGIAKRLSKIPVVLSATFQKPLSSGAKRFQVGVTVVYYF"
     gene            8262..9353
                     /locus_tag="VIS53_05685"
     CDS             8262..9353
                     /locus_tag="VIS53_05685"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEY5767306.1"
                     /translation="MTITNSLGKTLTLCAIVMLTEASAFCGTAEFQPTVATKNSPAGK
                     APDGMVWIPGGEFSMGAAVGGEGSHAMPMPSNDSQPVHRVYVDAFWMDATPVTNAQFE
                     KFVRATNYVTIAERTPSKEEFPTAPEENLVAGAVVFAPTDHEVPLNNHYQWWSYIKGA
                     NWRRPLGPQSDIKDKENYPVLHIAYPDAVAYAKWAGKRLPTEAEFEFAARGGLSGKTY
                     VWGDEFRRDGKWMANTWQGAFPVKDAGEDGYANIAPVKSFPPNGYGLYDMAGNVWEWC
                     SDWYRPDYYQTLADKGGVARNPQGPDSPLDPAEPNEKKRVHRGGSFLCNEQYCSRYIV
                     GTRGKGEVNTGTNHLGFRCVKSPSDLPTK"
     gene            9502..>10054
                     /locus_tag="VIS53_05690"
     CDS             9502..>10054
                     /locus_tag="VIS53_05690"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY5767307.1"
                     /translation="MSRDRNRAESAEQKRHESEEQLSLLQTITTELTTAEDLSSALEV
                     VLRDVCEKTGWVLGHAWVPNPPGTALDLVSMWYCDHGELKPFKTASETSHFKPGVGLP
                     GRVWESKRPTWVENVIDDPNFPRSAAARIAGLKTGVGIPILSGNQVIAVIEFFMRESR
                     AQNERLLNVIASVAGQLDLLHRAT"
BASE COUNT         2225 a         2602 c         2848 g         2379 t
ORIGIN      
        1 atgtagaaca ggaatgtaca tcatactggc tgatcagttg tgaaggagcg catagcgtaa
       61 tacgcgaaca agccggattt cgtttcgtcg gcaaaacgta tccgttgtca tttctcctgg
      121 tcgatgcgcg tctggaggga cggctccggc atggcgagaa ttatgtttgg ctgcacaaaa
      181 acggatcatt tgccgctttg ccgttgccaa ctccgcaaac gtggcgcgtt tttgttgacg
      241 ttacgaacgc tcgaaatctc ggcgaggtat cgctcgattt aattcggcga ctgatgatcg
      301 aacggaccgg tgctgccgaa attaagatcc acaacccgac atggatttcc gagttcagaa
      361 tccattgccg tttggtcgat cgatatcggc tcgggcgagt ttttgttgcc ggcgacactg
      421 cccatgtcca cagtccgacc ggcggtcagg ggatcgtgac cgggatccag gacgcagtga
      481 atctggcttg gaaattgggt cgcgtgctgc gtggcgctcc ggaagacttg ttggatacct
      541 atgaagagga acgccggccg aaagctgcgg aagtgttgaa ggaaacggac cggaccacac
      601 gtttactcct cgccccggat tcgattacga aactgattcg cgacttgatc gtgctcccag
      661 tcatgcggag cgaattcgtg caaaggaaac tcttcgcgaa actcgcccag cttcatgtga
      721 actatcgcgg caatacattg tcgcggcata acgagtcgat ttcgatccgt acggtgttaa
      781 aagcgggtga tcgcgcgccg gatgtcgcat ttcgccacaa agacaaaatc gtcacattat
      841 tcgaattgct tcggccgttc cgtccaatcg cacttgcgcg atttgaaggg aagaccagcc
      901 aggctcagat cgatcggatc aaaacacgac tccgcgtggc ggatatcacc atgtacgtca
      961 tcgccgaaag aggctcagat tcgctattag atcctgattg tttgatcgat atttacagtg
     1021 atttcgcgcg gctctacgga atgagaacgg aatacttctg cctgatcaga cctgacgacc
     1081 acatcggcct gtttcaaagt ccaatcgacg aagacgaaat tgcagattat gtcgcgcgga
     1141 tctcagcgag ctgaacgcaa acgcctgtgt atcaggcggc aggaatattt tcccggccaa
     1201 accgtaacac gcgcgacatc caaacaagct cgtttaggaa tttctccacg cgacggatgt
     1261 aagctggatc ggtgatcttg ccggtcactg gatcgaagag ctttccggcc gtgccgaaat
     1321 agacatccga gaaaatcgtg acgaggccga gctcgcgcag cactggaacc agactctgga
     1381 tcatccgcgc accgccgaag ggacccgcgg acacgccaca gacgccaacc gctttatgaa
     1441 tgtattcctt tagatttgta tccagcacat gcttcagcag tcctggaaaa ctgtgattgt
     1501 attccggcgc tacgatgatc aggccgtcgg cgcgttcgac cgtggcgcag aactcgctgt
     1561 cctttagcgc ttcgccggcg tcatccatgc gaatgggaat tttgcggatg tcgatcaatt
     1621 ccgttttgat atcgctgcgc ttcgatgctt caccaaaaac gaaatttgcg gcgggttcgg
     1681 ttaggcggcc ttgtcgcggg gtgccgataa tgaccggaag gaaaacgggt cgactcacct
     1741 cttgtgctgc catccttcga tttgtcgcag gaaccggagg aagcttacaa gcgcaatttg
     1801 cccgaagcgg ccaacaaagc gacgttcgta agcatcgcaa tttgccgggg tggcggaatt
     1861 ggcagacgcg ccagacttag gatctggtgg agaaatccgt aggggttcga gtcccctccc
     1921 tggcatttca acaaaatgac caccggcagc gacatcaaaa ataacgcttc tcccaaggat
     1981 gcggccatgt aataatgcgg ggtgccgtgg gaagaagttg ccagctaagg gcaggcattg
     2041 gtgtggttgg aggcaccgca atcgctacag tcacatcggg actctcttct gcattcgatg
     2101 catttttttc tgttacccga caaagcgttc ccctcaaagc caagactaaa ttgaggttcg
     2161 ctgaagatga agggtatatc cgtatctttt gaagctgcga acattcaatc agcagcgggt
     2221 aacgggaaca ttcgaagcgc ggttttcgac cggcgtctct tgatcatcgg gctgtgggtg
     2281 ttcgctggat attatctggg ttgcaaaatc ggttttgcac tcacgtttca acctcatcct
     2341 gtctctgttc tttggcctcc gaattctatt ctcgtcgcgg cgcttttgtt gacgccgccg
     2401 cgcagttggt gggtcgtgct gttggctgcg cttccagcgc atctggcggc gcaattacag
     2461 agtcacgttc cacctctgat gattttctgc tggttcctca gcaactcctg cgaagcactg
     2521 atcggcgccg ggttgatgcg gtacctggtg ggcgggccta ttcgtttcat aacacttcgc
     2581 aacgtgggcc tgttttgcct ttgcgtggtg ttcatcgccc ccttcttgtc ttcgttttta
     2641 gatgccgcgc ttgttgtatg gaaccattgg ggcgaggaca cctactggga gctgatccga
     2701 gtacgccttt tttcaaacgc cctcgccgcg ttgataattg tgccattagt cgtgacgtgg
     2761 gcgacgactg aaatccagcc cttgcgcaca gcccggcttt cgcgttacct ggaggcatgc
     2821 gcgctatttg ttggtctgtt gctcgtaagt tacgctgtct tttataaatt cggatcggga
     2881 gtggactcgg ctcttctctt tctcccgctc ccattccttc tttgggcggc agtacgattc
     2941 ggctctttgg gagcaagcac tgccgtttcg attgtcagct ttctggcgat ctggagcgca
     3001 gcccacgggc atggaccatt ctccggcgga ccagctgaac aagacgctct ttcaatccaa
     3061 atatttctaa tcgtcttagc gattccgctg ttgtttctgg ccacagtcat cgaggaacgc
     3121 acaactggag ccaccgaact gggcgaaagc gagtcacgtt tccggaacgt cgcgaatgct
     3181 gcgcccgtct ttatctggat ggccggcttg gataagctct gcactttctt taacaagccg
     3241 tggttagagt ttactggccg cagcatcgaa caggagcttg gaaacggctg ggctgaaggc
     3301 gtgcacccgg acgatctgca aaaatgcctg gaggtttaca ccgaagcatt cgatgcgcgg
     3361 cagccattcg ttatgcaata ccggctccgg cgaaacgatg gcgagtatcg ctggctttcg
     3421 gatcagggcg tggcacgcca tgacgcgcag ggagggttcg ccggctacat cggctcatgc
     3481 gtggacatca cagaattaat gaaaaaggaa gaggctttgc acgaattcga ggaacgagtc
     3541 gttctcgcag ccgaagcagc tcatcttggg gtgtgggaga tggaccccgg caccaacgaa
     3601 ctttggatgt ctgacagcgc gcgcactttg tttcaatttg attccgagat tgccctcgac
     3661 cacgccgcgt ttcaaggtcg cgttcacccg gaggatcgtg cgcttcgcga ttccgccgtc
     3721 aaacgcgcaa tcgaaaccgg cggtggatac gaaatcgaat atcgtgtttt gttaccggat
     3781 ggaactctgc gctggatcgg cgcgcgtgca cgctgcgtag cgggggataa tcgcaaaggc
     3841 gctcggctca ttggtgtttc catagatata acgccacgca agctcgctga agccgaagcg
     3901 ctgcggcaac gtgacgagct cagtcacctc agtcgtgtgg cgttaatggg cgaaatgtct
     3961 gcctccattg ctcatgagtt gaatcaaccg ttggctggaa ttctcagtaa cgcggccgct
     4021 ggacagcgtt tcatcgatcg cggggatgtt gatcagggag aaattcgcga attgctcggt
     4081 gacatcatcg cagatggtcg ccgcgccagt gagatagttc gcggcattcg gggcatggta
     4141 aagaaagagc aggtggaacg tcgctcggtg aatctcaacg aggtcgtggt ggacacagtg
     4201 cgcatgatat ctcacgatgc agtgctgcgt tcgtgccagg tggaaacatc gcttgatgcg
     4261 agtttgcgcg ccatcgaagc cgacccggtt caacttcaac aggtgttgct gaatcttgtg
     4321 atcaacgcat tcgatgcgat gcgagataca ccgatctcca ggcgcaaggt cgtgatcgcc
     4381 acgcaatcaa acggtgatga tacagtttgc gcgagcgtgc gcgattacgg tgtcggaatt
     4441 tcggcggaga tgcaggatac tctgttcgat cccttcttca ctaccaaaaa agaaggactg
     4501 ggaatgggcc tggcaattgc acgttcgatc cttgaatcgc acggcggcac catcgcgggg
     4561 aaaaacgccg atgctggtgg ggctcaattt gaatttgtcc ttccggtgaa cggaccttct
     4621 gcatgatgcg tgtcggtcgc tgatttggtg cgtttggtcg aatcagcaca gatagcgtcg
     4681 gtcaagcgac gtgagactaa ggtctaatat ggccgcgtcg aaagcgagcg tagtattcac
     4741 ttgttttgct tgctccacgc ccagatcgga tctgccttct cgacgacgac gcttccgtgt
     4801 tgaggggcct caatcggctt ctcatgtcgg caggttggca ccctgaacaa ttcagcgagc
     4861 cggatccgtt tctaaattat gtgaaggttc atcggcctac gattgccatc attgatgttt
     4921 ggatgccgct catgaacggc ctcgaggttc aatcgcgggt gcgggagctt tcaccgtcta
     4981 cgcgcgtcat catgtttacc ggaaaagacg atccgctcgt tcgttccacc tctttgaaag
     5041 ccggcgcgtc agcttttttc accaagccat tcgacgacga ggaatttctc accgccattc
     5101 ggctggctct ttccgcaatg tgatgtccct tcgaccggct gtaaatcgga acgagaattt
     5161 ccaactggat ttgtccgtga agattgtgta ttccaacgcg cgttcctaaa cataatgcca
     5221 gcttcttcga gtgatttgca tcgagaacta cattgggagc cggttgccta gcacggcaat
     5281 ccggacttgc gtcacatcaa agagattggc agccgagagc gaccagaagc atcacgcgga
     5341 ctcgccaact gcccattgat gccatgaaat ctttattcct gtcatcgatc gctatcctta
     5401 ccgggttgtt cgttcttgcg tggtcattca tgttggctga aacctttacc gaaggcgtcc
     5461 gagtctctcc ggaaacgcta acgctgaaac ccggtcaata tgtttgggaa cctgagcgcg
     5521 cgccggaagg gccgctcttg atcgtggcca gcattactga gcaggtggcg tatgtgtatc
     5581 ggaatgggat ctgcatcgca cgatcgagcg tcagcactgg gcgtccgggt caccctactc
     5641 ccactggcgt tttcacgatc ctggaaaaag aggtgcatca tacctcgagt atctacaagg
     5701 gggcggcgat gccttacatg gagcgcgtga cctggggcgg gatcgcatta catgccggag
     5761 atctaccggg ataccccgat tcccatggat gcgtccggct tccgcttgaa ttttccaagc
     5821 tgctgttcgg agtgacaatg aaaggcgcga cggtgatcat cgcggacgcg cactccgcgc
     5881 ctgcgacaac cgtgcacccc ggtctgttct tttcccaaag cggtcaggaa agtgagccga
     5941 tcaccgccgg caaatttgac tgggatccag acaagtcccc gagtggtcca gtatctgtga
     6001 tagcgagcag cgtggacaaa acagtctatg tgtatcgcaa tggcgtggaa atcggccggg
     6061 ccggaatacc aaatccgcag gtgattttgc ctcttgacga cttggtcttt agcgcaatgc
     6121 agggaacaga tgcggacgga catcttcgct gggcggaagt gacagcgact ggagagagca
     6181 aatcaaatca aagtgttttt ctgaccgtgc agaagagtgg gctgccgcct gaattcctcg
     6241 acaaggcaaa gtccgtcatc acgccaggtg cgactctcat cttcactgat aggcctgtag
     6301 atccaagcac gcagagtcct ccgaactttc agattctggt tgcgcaaaag gacaagcctg
     6361 aaaaatctag tcagttacag taacaaaaac ctgattttca tagcgacgga aagttgcacc
     6421 tgaattggcg tgcagtcgtg tctcgcggga agcatgagca aaaatattta tcctttggct
     6481 gatgccgtca gagctaacat tgcaaaataa tcgcgctgaa ctgtcgggat gattatcagt
     6541 agtattgctg caattttgtt cgcagttcta gtaggagtga ctgtggttgg agcgcgtcta
     6601 cgacgactcg ttcccgctga gcacctcagc accgattcca aagacgccgt gaagctcgcg
     6661 cttggccttg tcgcgactat gacggcgata ctcctgggac ttcttgttag ttcagcaaag
     6721 agttctttcg acactgcgcg aagcgaagtg atgcagatgg ccgcgaagat cgctttgctg
     6781 gatcgtgtgt tggtgcttta cggaccgcaa acactggaag cgcgccgtgc acttcgcgac
     6841 tcggtcgccg aagccgtcgg acgcacgtgg ccggccgagg gacgtcgtcc agttcgatta
     6901 gatcctaacg agcagatggg tgatgctgta tacgcggcga ttagtagtct cgcgccgcag
     6961 gatgatgcgc aacgtgttct caaaacggag gcagccaagc tgatgatcga gttggcggag
     7021 cttcgagctc tggtgcaagc gcagggggtc tcgtcggtat caacgccatt gctgattgcg
     7081 ttggtaatat ggctcgtggt gatcttcctc ggttttagtc ttctcgcgcc gggcaatgct
     7141 acaagcactc ttgccctgat cgccggtgcg ttctccgttg cgtgcgctgt gttcattatc
     7201 ctcgaactcg accatccatt tgccggcgtc gtgcgggttc ccggcgcacc gatgatcaaa
     7261 acgttggccc atctgtccaa agacacgagc taaatccaag ttatcgaaag tctcgtccgt
     7321 gttgtagctc gtggctgccg atcatgttca ttgaacgcat gtgtgttgtc tcaaaattgt
     7381 tgcagtggtt gttcattgtt acgctgttac tacttgcgta cgaccacgga gttgcagctg
     7441 aaccagggcc taatccgaca acggcagacg aattgaaaca attaaatgat cccaccctgc
     7501 tcgcaactca cgtctcgctg gaatcagagt gggatcaatt caaggatggc gctgaaaggg
     7561 cgaattggac attcaccggc ttgtggggct ggcgtgtcag tgatagccag gattgggcga
     7621 tacgtttcaa gttgcccttc gtctatgaca gaactactcc gggattagat cacctcgata
     7681 ccggaggtgt cggcgacgtg gaactcggga caggcaccgc gtttcgtttg agtcacaagt
     7741 ggaggatggc tggtggcatt gagctgcatg ctgatactgc ttcagatccc tcttttgcag
     7801 aaagcgtgtg gcgattgaaa tggggctggg gaattgctca cgactttagc cactggttga
     7861 gtttgtcacc caatgtcgag tacaaccgtt cgattgctga agaagatgat gttcggccgc
     7921 aaagttatct tgacatgtcg gtacccgcga ccttcatcct tccacagcac tggtcagtaa
     7981 gcgcaaaata tcggaccttg ctggatttca acaacggcga tcgatgggct cacagtctga
     8041 ccgctggcat cgcgaagcgc ctttcaaaga ttccggttgt gcttagcgca acatttcaaa
     8101 agccactcag tagcggagcg aaaagatttc aagtcggcgt aacggtcgtt tattactttt
     8161 aatccctacc gttgctcgaa aagcggacgt cacaaaaact tgcaactccc tcttcgcagc
     8221 tatgatggtg gcaggcgttg cagaaccccg aactaaaata aatgaccatc acaaactctc
     8281 ttggaaagac gctcacgctt tgcgcgatcg tcatgttaac tgaagcctcg gcgttttgcg
     8341 gcacggcgga atttcagccg actgtcgcaa ccaagaattc gccggcaggc aaagcgcctg
     8401 acgggatggt gtggatcccc gggggcgaat tttccatggg cgcggcggtg ggcggcgaag
     8461 gaagtcatgc aatgccgatg ccttcgaatg actcacagcc ggtacatcgt gtgtacgtag
     8521 atgctttctg gatggatgcg actccggtga ccaatgcgca gtttgagaag ttcgtcaggg
     8581 cgacgaatta cgtcacaatt gctgaacgca cgccctcaaa agaagaattc ccgactgccc
     8641 ccgaggagaa tctcgtagcg ggcgcagtcg ttttcgcgcc gaccgatcac gaggttccgc
     8701 taaacaatca ttatcaatgg tggagctata tcaaaggcgc gaactggcgt cgcccgctcg
     8761 gtccgcaaag cgacatcaaa gacaaggaaa attacccagt gctgcacatc gcgtaccccg
     8821 acgcggtagc ttacgcaaaa tgggccggta aacgtttgcc gaccgaagcg gagtttgaat
     8881 ttgcggcgcg cggcggtttg tcaggaaaaa catacgtctg gggcgacgaa tttcgtcgcg
     8941 acggcaaatg gatggccaac acatggcagg gagcatttcc agtgaaagat gcaggcgaag
     9001 acggttacgc caacatcgcg ccggtgaaat cgtttccacc gaacggctac gggctctacg
     9061 acatggccgg aaacgtatgg gaatggtgca gcgattggta tcgccctgat tactaccaga
     9121 cgctggcaga caaaggcgga gtggcgcgca acccgcaggg gccggattcg ccattggatc
     9181 ctgctgagcc taacgagaag aagcgtgtcc atcgcggtgg gtcgtttctt tgcaatgagc
     9241 aatattgctc acgctacatc gtcggcacgc gcggcaaagg cgaagtgaac accgggacga
     9301 atcatctcgg ttttcgctgt gtgaaatcgc cttcggattt gccgacaaaa taagagctca
     9361 ctgttccgcg gtggagaccg cgcggcgttt cgtttttgct tccatggggg ccgtacctac
     9421 cttgcatcgg ttggcctttg taggcctttg gtctaatgga attatgccgt cgcgtatcac
     9481 aggattaatc tcgccgagtc tatgagcagg gatcgtaata gagctgaaag cgcggaacag
     9541 aagcgccacg aaagtgaaga gcagcttagt ttgctccaaa caattacaac ggaattgacg
     9601 acagccgagg atctgtcatc ggccttggaa gttgtgcttc gcgacgtttg cgagaagacg
     9661 ggctgggtgc tgggacacgc atgggtgcca aatccaccag gaactgctct tgatttggtt
     9721 tcaatgtggt attgcgatca tggtgagctg aaacctttca agacggcttc tgagacatct
     9781 cactttaagc cgggcgttgg gcttcccgga cgcgtgtggg aatcgaaacg gccgacctgg
     9841 gttgagaacg tcattgacga tcctaatttt ccgcgatcgg cggccgcacg gatcgcaggt
     9901 ttaaaaacgg gcgtgggaat tccgatcctc tcgggcaacc aggtcatcgc tgttatcgaa
     9961 ttttttatgc gcgagtcgcg tgcccaaaat gagcgcttgc taaacgtgat cgcctcagtc
    10021 gccggccaat tagatttgct tcatcgcgcg acgc
//
LOCUS       DATDAJ010000231         4751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1313959, whole genome shotgun sequence.
ACCESSION   DATDAJ010000231 DATDAJ010000000
VERSION     DATDAJ010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4751
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1313959"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1264
                     /locus_tag="VIS53_05695"
     CDS             <1..1264
                     /locus_tag="VIS53_05695"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5767308.1"
                     /translation="NGDKIERVSMGKQDAATLGKQVSCVGKFILPGYIDTHVHFFQSA
                     DLFTRPDGADFNDVRPYKDEVAWIKSHLDDVLARYIRSGITSVVDVGGPMWNLEVRKK
                     ANATAKAPRVAVAGPLISSVSREKLDLGDPPIVKIDTPDQAREFVRKLAEQKPDLVKI
                     WYIVDKDYPVDAFRPIVRATIEESHAHKIRVAVHATELETARAAVEEGANVLVHSVID
                     KPVDDAFVKLLKDRDVVLCPTLVVFERYGRTFSHQLNLTPEEEKWGNPEVIASLDVTK
                     IPQDKLPQRVKDALADQKAALDRIKKTYDVALPNLKKLEDAGVTIAAGTDAGNIGTIH
                     GPALFREFQLMKEAGLTPMQILQCATANAGKLFGGETGARVGKLENGCFADLVILNSN
                     PLDDIAHASDIDTVVKNGMAYPADTILH"
     gene            1344..2210
                     /locus_tag="VIS53_05700"
     CDS             1344..2210
                     /locus_tag="VIS53_05700"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY5767309.1"
                     /translation="MTTHPTEYAHPEALVETDWLEKHLKDDGIRVIESNEDILLYDTG
                     HIPGAVHIDWRADLQDPLIRDYISPEKFARLCSRHGITPDTTCIFYGDKANWWACYAL
                     WAFRLFGHEKVKILNGGRDKWKAEARPMTREAPKYAETTYPVPKKRFDKEIRAFFDEA
                     LAQSKGGKPLIDVRSPGEYRGEITHMPEYPQEGVLRGGHIPGAKSMPWKTATNDDATF
                     KPASELAKLYFEQCGVSPDKDTVVYCRIGERSSHTWFVLTYLLGLNNVRNYDGSWTEW
                     GNKVGAPIEKSA"
     gene            complement(2367..4067)
                     /locus_tag="VIS53_05705"
     CDS             complement(2367..4067)
                     /locus_tag="VIS53_05705"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEY5767310.1"
                     /translation="MNLSPDKKIAGVLVPLFALRQQNDLGIGDLGALREFIDWIAEIG
                     FTLVQLLPINETGADNSPYNAISAIAIEPTTLHLAPGTPEDLTRNDFEDALSEIDIAG
                     LRRGRVKYRQVKELKQRIFEKAFANFSARADEKRQSEFQRFCEAESPWLRDYALFRVL
                     IEQNKGSAAWDQWPQQHQTIESARNWLRELPLEKQSAVTRRLDFFCYVQWIAQQQWRD
                     VKAHAEQRGVALMGDIPFGVSYYSADVFSRADEFLLDWFGGAPPEPHFKDDAFTQKWG
                     QNWGIPLYRWGAMRANNFQWWQERVRATRRIFHLFRIDHVQGFYRVYAFPWRPQRNKE
                     FLPLDQHQMLERTGGRAPHFVSRDDDTPEHREANKREGEEYLCVIMDEAGAARVAGED
                     LGVVPDYVRPSLQSLGIAGFKIPQWEIRDGMIIPRDRYERLSVATYATHDHQPIRALW
                     EEALELPNSERGQQARATIEKIALFAGLNSKIDQLDYEKDFYPAMMDALFRCNSWIAV
                     VMITDLLAREYRFNVPGTKANLNWTRRIQRSIAKLRSSPRERKRMQLIRELLMKTARV
                     "
     gene            complement(4101..4496)
                     /locus_tag="VIS53_05710"
     CDS             complement(4101..4496)
                     /locus_tag="VIS53_05710"
                     /inference="COORDINATES: protein motif:HMM:TIGR04256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEY5767311.1"
                     /translation="MLEIGDEHPDKLLHRGVTEAILGAAFDVHSELGYGFLERVYQRA
                     LQVELSRRGFSAEIERRIQVKYKGVIVGDYDADLIVAGSVVVEIKVNPQYDKRDEAQL
                     LNELKATGLKVGLLVNFGRMKVEYKRLVF"
     gene            complement(4541..>4751)
                     /locus_tag="VIS53_05715"
     CDS             complement(4541..>4751)
                     /locus_tag="VIS53_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY5767312.1"
                     /translation="SSRSLDTRDALEEERRLFYVAITRARDELYLTYPHMRLSGGYGD
                     VFQRPSRFLQEIPTDLVEDWQVKRG"
BASE COUNT         1078 a         1347 c         1308 g         1018 t
ORIGIN      
        1 caacggggac aagattgaac gcgtttcgat gggcaaacag gacgccgcca cgctcggcaa
       61 acaagtcagt tgcgtcggca aattcatttt gccggggtac atcgacacgc acgtgcactt
      121 ctttcaatcg gctgatttgt tcacgcgacc ggacggcgcc gatttcaacg acgtccgccc
      181 gtacaaagac gaagtcgcgt ggatcaaatc gcacctcgac gacgtccttg cgcgctacat
      241 tcgcagcgga ataaccagcg tcgttgatgt cggcggaccg atgtggaacc tcgaggtccg
      301 caagaaggcc aacgcaactg cgaaagcgcc gcgcgtagcc gtggcgggcc cgctcatctc
      361 aagcgtctct cgcgagaaac tcgatctcgg cgatccgcca atcgtgaaga tcgacacgcc
      421 cgatcaagcg cgcgagttcg tgcgcaaact agcggaacaa aaaccggatc tggtgaagat
      481 ctggtacatc gtcgacaaag attaccccgt cgatgccttc cggcccatcg tccgcgcgac
      541 aatcgaagag agtcacgccc acaagattcg tgtcgccgtg cacgcaaccg agctcgagac
      601 tgcgcgcgcg gcagtggaag aaggcgcgaa cgtgcttgtc cacagcgtga ttgataaacc
      661 ggtcgatgac gcgtttgtga agctattgaa ggatcgcgac gtcgttttgt gtccgacgct
      721 ggtagtgttt gaacggtacg gccggacgtt ttcgcaccaa ctgaatctca ctccagagga
      781 ggaaaagtgg ggcaacccgg aagtgatcgc gtcgctcgat gtgacaaaga ttccgcagga
      841 caaactgccg caaagagtca aggacgccct agctgatcag aaagccgcgc tcgacaggat
      901 taagaaaacg tacgatgtcg ctttgccgaa tttgaagaag ctcgaagatg ccggcgtgac
      961 catcgccgcg ggaactgacg cggggaacat cggaaccatt cacgggccag ccctcttccg
     1021 ggaatttcag ttgatgaaag aagctgggct tacgcccatg cagatactgc aatgcgccac
     1081 agcgaacgct gggaaacttt tcggcggcga aaccggtgcg cgtgtcggca aactcgaaaa
     1141 cggctgtttc gccgatcttg tgattctcaa ttcaaatccg ttggacgaca tcgcgcacgc
     1201 ttctgatatc gacactgtag tcaaaaacgg catggcttat ccggctgata ccattttgca
     1261 ttgagcgtgt tcccagcgac gcgccttcga ctgaacccga aatcccttgc tcgcccgcga
     1321 cagtagccgc aaattttctt cctatgacta cgcatccaac tgaatacgcg catccggaag
     1381 cgctggtgga gaccgattgg ctggaaaaac atctcaaaga cgatgggatc cgcgtcatcg
     1441 aatcgaatga ggacattttg ctttatgaca ccgggcatat tcccggtgcg gtgcacatcg
     1501 attggcgcgc cgatcttcag gatccgctga ttcgcgatta tatctcacct gaaaaatttg
     1561 cgcggctttg cagccgtcac ggcattacgc cggataccac ttgcattttc tacggcgaca
     1621 aggcgaactg gtgggcgtgt tacgcgcttt gggcgttccg gttgtttggc catgagaaag
     1681 tgaaaattct caacggcggt cgcgacaaat ggaaagcgga agcccgtccg atgacgcgcg
     1741 aggctccaaa atacgcggag acaacgtatc cggtgccgaa gaaacgcttc gacaaggaga
     1801 ttcgcgcatt cttcgatgaa gcattggcgc aaagcaaagg tggtaaaccg ctgatcgacg
     1861 tacgctcgcc gggcgaatac cgaggtgaga tcacgcacat gcccgagtat ccgcaggaag
     1921 gcgtgctgcg cggcggtcat atccccgggg caaagagcat gccgtggaag acggccacaa
     1981 acgatgatgc cacattcaag ccagcctcgg aactggcaaa gctctatttc gagcagtgcg
     2041 gcgtcagccc cgacaaagac acagtcgtct attgccgaat cggcgagcgc tccagtcaca
     2101 cctggtttgt gctgacctac ttgttaggcc tgaacaacgt tcgcaactac gacggctcgt
     2161 ggacggagtg gggcaacaaa gtcggcgcac ccatcgaaaa aagcgcgtag atcccatggg
     2221 gagcgcgtgc gcctcgcacg cacatttcgg cgcctcgccg aaatgcatca tcccgctagg
     2281 acagtaggtt tactcttgtt caaaaaagtt cgcgttggcg aggacgccat cgccagcacg
     2341 cgagagcgcg tgcgctcccc gaagattcaa acgcgcgcgg ttttcatcag cagctctcga
     2401 atcaactgca ttcgctttcg ctctctcgga ctagaacgca gctttgcgat tgagcgctga
     2461 attctccgtg tccaattcag gttcgccttt gtcccgggca cattgaaccg gtattcgcgc
     2521 gcgagtagat cggtgatcat gaccactgca atccaggagt tacatctgaa aagcgcgtcc
     2581 atcatcgcgg gataaaaatc cttctcataa tcgagctggt cgattttaga atttagcccc
     2641 gcgaaaagcg cgatcttctc gattgtagct cgcgcctgtt gtcccctctc ggagttcgga
     2701 agctcgagtg cttcttccca caaagcgcga attggttggt gatcatgtgt tgcgtaagtc
     2761 gccaccgata gccgctcgta tcggtcgcgg ggaatgatca ttccatcgcg gatttcccat
     2821 tgtggaattt tgaatcccgc tatgccaagc gattgcaaac taggtcgcac gtaatcgggc
     2881 accacgccga gatcttcccc ggccacgcgc gcggcgccgg cttcgtccat gataacgcac
     2941 aagtattctt cgccttcgcg cttgttcgct tcgcggtgtt cgggtgtgtc gtcatcgcgt
     3001 gaaacgaaat gcggcgcacg cccgccggtt cgttccagca tctggtgttg atccagcggc
     3061 aagaattcct tgttcctttg gggccgccac ggaaaggcat aaacgcggta aaatccctgg
     3121 acgtgatcga tccggaacag atgaaagatc cgtcgggtag cgcgcacccg ttcttgccac
     3181 cattgaaaat tgttggcgcg catggcgccc cagcggtaga gcggaatgcc ccagttttgt
     3241 ccccattttt gcgtgaatgc gtcgtccttg aaatgcggct cgggaggagc gccaccgaac
     3301 caatcgagca aaaattcgtc ggcgcgcgag aagacgtcgg cgctgtaata actgacgccg
     3361 aacggaatat cgcccatcag cgccacgccg cgttgctccg catgcgcttt aacgtcgcgc
     3421 cattgctgct gtgcgatcca ttgcacgtaa cagaagaaat cgagacggcg cgtcacggct
     3481 gattgcttct ccaacggaag ctcgcgcagc caattacgag cactttcgat cgtctgatgc
     3541 tgctggggcc actggtccca cgcggcgctg cccttatttt gctcgatgag aacgcggaac
     3601 agcgcgtaat cgcgcaacca gggcgattcg gcttcgcaga accgttggaa ttctgattgt
     3661 cgcttttcgt cggcgcgagc ggagaaattc gcgaacgcct tctcgaaaat gcgctgcttt
     3721 agttctttga cctgccgata ttttacgcgg ccacggcgca ggcccgcgat gtcgatctcg
     3781 gagagtgcgt cctcgaaatc attgcgcgtt aagtcctcgg gtgtacctgg cgcgaggtgc
     3841 aaagtcgttg gctcgatcgc gatcgcgcta atggcattgt aggggctgtt atccgctccg
     3901 gtttcgttga tgggcagaag ctgaacaagg gtgaatccga tctctgcaat ccaatcaata
     3961 aattcccgta acgcgccgag atcgccgatt cccaggtcgt tctgttgccg caacgcaaac
     4021 agcggcacga gcacaccagc gatcttcttg tccggcgaca gattcattca gccacggatg
     4081 aacacggatg aaacacggat ttagaagacg aggcgtttgt actcgacttt cattcggccg
     4141 aaattgacca atagtccaac cttcaggccg gttgctttca attcgttgag caattgagct
     4201 tcatcgcgtt tatcgtattg cgggttaact ttgatctcga cgacgaccga gcctgctacg
     4261 atcaaatcag catcataatc cccaacgatg acgcctttgt actttacctg aatgcgtctt
     4321 tcgatctcgg cggaaaagcc ccgacggctc agctcgactt gtaacgcgcg ctgataaacg
     4381 cgttcgagaa atccatatcc gagttcacta tggacgtcga aggcagcccc aagaattgct
     4441 tcagtaaccc ctcgatgcag caatttgtca ggatgttcgt ctccgatttc cagcatctct
     4501 tatccgtgtt tcatccgtgt taatccgtgg ctcaaaaaga tcagcccctt tttacctgcc
     4561 agtcttccac gagatcagtt ggaatctctt gcaaaaaacg cgacggccgc tggaagacgt
     4621 cgccgtagcc gccactcagg cgcatgtgcg gataggtgag ataaagctcg tcgcgcgcac
     4681 gcgtgatcgc cacgtagaac aagcgccgtt cttcctccag cgcatcgcgg gtatcgagcg
     4741 agcggctgct g
//
LOCUS       DATDAJ010000232         3029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1314876, whole genome shotgun sequence.
ACCESSION   DATDAJ010000232 DATDAJ010000000
VERSION     DATDAJ010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1314876"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VIS53_05720"
     CDS             complement(<1..627)
                     /locus_tag="VIS53_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767313.1"
                     /translation="MRHIGRLALACLIGVLSQVAHADFSTEIAEASTPLSEGVPEVAV
                     VRLQSLLNKNLPEPQWRAVAEKLAEAQVAANEPEATLILLTDARLRDLPWAQFWRAHS
                     LASLHRWADALPLYEELTNDTSPFQKAAVFGAGDTLRALGKRQEALRKFVLLAHDEEW
                     GTRAQLRAAELHIDLGNAPEARRLLEQLQPVSVAERRERRVLRGRLELI"
     gene            complement(624..>3029)
                     /gene="uvrA"
                     /locus_tag="VIS53_05725"
     CDS             complement(624..>3029)
                     /gene="uvrA"
                     /locus_tag="VIS53_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEY5767314.1"
                     /translation="VLEKLRREGFVRARIDGQMIELDRTEPIRLKKGERHRIEAVVDR
                     LVVRDGIRVRLTDSIETALKWGGNRIVVLSQMSKTPNAQRPTPNAESEQWSECRYSTD
                     YGNAETGFNLGELTPRHFSFNSHLGACPACHGLGTQLVVDPELMISDQNKTLAEGAIT
                     PWRRGTKRMRSYYRHLQDALIKHFNVKEDVPFADLPEAFKAALYFGTNGQPIEMRFGG
                     NGEKKTTKPFEGLVPQMQRLYEQTESEFTRNRIRAFMTRETCKVCCGARLKPEILAVT
                     IKANHGRELNIHQFSQQTVEDALQFIGGLDLSEQQQTIVTDVVREIRSRLQFLVEVGL
                     GYLTLDRESGTLSGGEAQRIRLATQIGSGLAGVLYILDEPSIGLHQRDNSRLLGTLRK
                     LRDLGNSVIVVEHDEETIRAADHILDLGPGAGPRGGEIVAEGILDDIARAKNSLTGDY
                     LSGRARIAVPKQRAQPRPDGWLTVVGASENNLKKIDVSFPLGCLTCVTGVSGSGKSTL
                     VDDILRRALFRHFYNSKDKPGAHKAIRGLEQIDKVVVIDQSPIGRTPRSNPVTYTGAF
                     TPIRELFAQLPAARVRGYDAGRFSFNVKGGRCENCEGGGLIKIEMHFLPDVYVECEVC
                     RGKRYNRETLEITYKGKNIADMLDLTVDEAARFFRNVPTIAEKLNSLLDVGLGYLRLG
                     QAGTTLSGGEAQRVKLATELAKKATGRTVYILDEPTTGLHFADIEKLLEVLMKLRNAG
                     NTIVVIEHNLEMIKCADWIIDLGPEGGEQGGEVVGSGPPERVATIPASHTGQYLPAML
                     ERR"
BASE COUNT          611 a          872 c          827 g          719 t
ORIGIN      
        1 aatcagttcg aggcgcccgc gcaacacacg ccgctcgcgc ctttctgcaa cggaaactgg
       61 ttgcaattgc tccaaaagcc ggcgtgcctc gggagcgttc cccaagtcaa tgtgcaactc
      121 agccgctcgc aactgcgctc gcgtgcccca ttcctcatca tgcgccagca gaacaaattt
      181 tctcaaagcc tcctggcgtt ttcctaacgc gcgtaacgtg tcgcccgcgc caaaaacagc
      241 tgctttctga aacggcgaag tgtcgttagt caattcctcg taaagcggca gcgcgtcagc
      301 ccaccggtgc agactggcca gcgaatgggc gcgccagaat tgcgcccatg gcaagtcgcg
      361 taacctcgcg tcggttaaaa gaattagagt ggcctccggt tcgtttgcgg ccacctgcgc
      421 ttccgcaagt ttttcggcga ctgcgcgcca ttgtggttct ggcagatttt tgtttagcag
      481 agattgcaac cgcacgaccg cgacctccgg cacgccttct gaaagcggcg tactggcctc
      541 ggctatttca gtcgagaaat ctgcgtgggc gacttggctg agtaccccga tcaggcatgc
      601 gagcgctaag cgtcctatat gtctcatctt ctctccagca ttgccggtaa gtattgcccg
      661 gtatgactgg ccggaatagt agcgactcgc tcaggcggac ccgatccgac cacttcgccg
      721 ccttgttcgc ctccttcagg acccaaatcg atgatccagt cggcgcactt aatcatctcg
      781 agattgtgtt caattaccac gatggtgttg cccgcgttgc ggagcttcat caacacctcc
      841 agtaattttt caatatcggc gaaatgcaac ccggtcgtcg gttcatcgag aatgtaaaca
      901 gtgcgaccgg tggctttttt ggcaagctct gtggcaagtt tcacgcgctg cgcttcgccg
      961 ccggaaagag tcgttccggc ctggccgagt cgtagatagc ccaagccaac gtcgagcagt
     1021 gaattgagct tttccgcgat tgttggcaca ttgcggaaga atcgcgcggc ttcgtccacg
     1081 gttagatcga gcatatcggc aatattcttg cctttgtagg tgatctcgag agtctcgcgg
     1141 ttgtaccgtt tgcctcggca aacctcgcat tcgacgtaaa cgtcgggcaa gaagtgcatc
     1201 tcgattttga tcaaaccgcc gccctcgcaa ttctcgcaac gaccgccttt gacattgaaa
     1261 ctgaatcgac ctgcgtcata accgcggacc cgcgctgcgg gtaattgcgc gaacagttcg
     1321 cgtatcgggg tgaacgcgcc cgtgtatgta accgggttcg agcgcggcgt ccggccgatt
     1381 gggctttgat cgatcacaac tactttatcg atctgttcca gtccgcgaat cgccttatga
     1441 gctcccggct tatccttcga attgtaaaaa tgccggaaaa gggcgcgccg caaaatgtcg
     1501 tccaccaaag tcgatttgcc gctgccagaa acaccagtca cacatgttag gcaaccgaga
     1561 ggaaatgaga catcgatttt cttcaggttg ttttcactcg cgcctacaac tgtaagccag
     1621 ccatcgggcc gcggctgagc gcgctgtttt ggaaccgcaa tgcgcgcgcg gccggaaaga
     1681 taatcgccag tcaaagaatt tttcgcgcgc gcgatgtcgt cgagaattcc ctctgccaca
     1741 atctcgccgc cacgcggccc tgcgcctgga ccaagatcaa gaatgtggtc ggcagcccgg
     1801 atcgtttctt catcgtgctc gactacgatg acagagttcc caagatcgcg cagttttcgc
     1861 agcgttccca gtaaacgcga gttgtcgcgt tgatgcagac cgatgctggg ttcatcaaga
     1921 atgtagagaa cgccagccag accggagccg atctgtgtgg cgaggcgtat ccgttgcgct
     1981 tcgccgccgg aaagcgtgcc gctctcgcga tccaatgtga gatagcctag cccgacctcg
     2041 acgagaaatt gcaggcgcga gcgaatctcg cggacgacgt ctgttacgat ggtctgctgc
     2101 tgctcgctca ggtcgagacc gccaatgaat tgcagcgcgt cttccacggt ttgctggctg
     2161 aactggtgga tgttcaattc gcggccgtgg ttagccttga ttgtgacagc aaggatttcc
     2221 ggtttgagtc ttgcgccgca gcagaccttg catgtctcgc gtgtcatgaa tgctcgaatc
     2281 cgattgcgcg tgaactcgct ctcggtttgc tcataaagcc gctgcatttg gggcacgagt
     2341 ccctcgaatg gttttgtggt tttcttttca ccgttgccgc caaaccgcat ttcaattggc
     2401 tggccattag tgccgaagta aagcgcggct ttaaatgctt caggcaaatc ggcgaacggc
     2461 acgtcttctt tcacgttgaa gtgtttaatg agcgcatcct gcagatgccg atagtagctt
     2521 cgcatgcgtt tcgtgccgcg acgccagggc gtgattgctc cttcggccag cgttttattt
     2581 tggtcggaga tcatcagctc cggatcgacc accaattgtg ttcccaaacc gtggcaagcg
     2641 gggcaagcgc cgaggtggct gttgaaagaa aaatgtctag gcgtcagctc gcctaagttg
     2701 aagccggttt cagcattccc gtaatccgtg gagtagcggc attctgacca ctgttccgat
     2761 tcggcattgg gcgttgggcg ttgggcgttg ggcgttttcg acatttggct caagaccaca
     2821 atgcgattgc cgccccattt gagagctgtt tcgattgagt ctgtcagtcg tacacgaata
     2881 ccatcgcgga cgaccagccg atcgaccacc gcttcgatcc tgtgccgctc gcctttcttc
     2941 agccggatcg gttcagtgcg atccagttcg atcatctgtc catcgatgcg cgcacgaacg
     3001 aatccttcac gccggagctt ttcgagcac
//
LOCUS       DATDAJ010000233         6667 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1318370, whole genome shotgun sequence.
ACCESSION   DATDAJ010000233 DATDAJ010000000
VERSION     DATDAJ010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6667)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6667)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6667
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1318370"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            437..1120
                     /locus_tag="VIS53_05730"
     CDS             437..1120
                     /locus_tag="VIS53_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767315.1"
                     /translation="MEDVVVPLPNEIFGALNKLGGVNWRAHVRSDKGPNFTERPRIAL
                     LLGTVIADGFIAVQAEDAETVKDIGQRVTTLAKGIGVGNSITPHAKAIIEAADKRNWN
                     NVRRELDRTQNSVQQAMNEVHDEKLSQLVSLGGWLRGTEVLTSVVNEHFSADGAELLH
                     QPDLLSYFEKRLQGMPEFDLPIIHQIKDGLVEVKPLIDIGDRRIPPETVKKVNEITTR
                     LGQGIVTKD"
     gene            1128..1577
                     /locus_tag="VIS53_05735"
     CDS             1128..1577
                     /locus_tag="VIS53_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767316.1"
                     /translation="MNRFVKIFVRTSSLLLILTALRPSIFASVDDAQSFALQAAEPYV
                     KQGFQVREDYWGGDLGSGEKKAVRQQLFKGNEYWFWLGTEVDKAKVSVHVYDSDGKLA
                     EEPDSWEKGHFAAAHVIPKTTGSYFIIVSVEQSPEDRTHWALVYGFR"
     gene            1607..2581
                     /locus_tag="VIS53_05740"
     CDS             1607..2581
                     /locus_tag="VIS53_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEY5767317.1"
                     /translation="MTESRTLQFESPRALQSLYANDIKLLKHLEDSLGVKLTTREGWV
                     KLEGDPSRIDKAQQVFQQLEQARQQGVDIQKHEFNYTLKTVTEERDESLADIVSTKIV
                     TSSRKPPVVARSVNQRAYVEAIQKHDVVFGIGPAGTGKTYLAVAMAVAALKKEQVARI
                     ILTRPAVEAGEALGFLPGDLEQKVLPYLRPLYDALREMLEPEEMERAIARQTIEVAPL
                     AYMRGRTLSNAFVILDEAQNTTTEQMFMLLTRIGLNSKCVVTGDVTQIDLPANKRSGV
                     LEALQALKNVPGIATVYFTERDVVRHELVRAIIGAYQSHRGPASESRK"
     gene            2591..4231
                     /locus_tag="VIS53_05745"
     CDS             2591..4231
                     /locus_tag="VIS53_05745"
                     /inference="COORDINATES: protein motif:HMM:NF019318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing metalloprotein"
                     /protein_id="HEY5767318.1"
                     /translation="MFDFLKRGRLVKRGLASPKRRRRRPRSELMRNVECSSHVKVFIF
                     ALFAGGLAFLVFSGQQAEPTKNYIIALLVLATAITQLWINQPKSFEQNSRILLVLGVI
                     FVQLAVTKLLLVVCNSGNYRFLRPETAGLITPYAFAPLVLSVLLNRQHGLYAAFFVSL
                     WSSMLFGPIDAPLLITSLISGFTAVSLTLQVRRRSRLIRAGFFVGLAIWLLSLTFGLI
                     GPINWFYPTANDWGMVGVQSALAIGNGIVTAMIVGGALPMLENLFGITTDISWLEASD
                     LNHPLLRRMTIEAPGTYHHSLVVANLAEAAAEAVGANATLCRVCSYFHDVGKLVKPEY
                     FTENMSFERNPHDDLAPTMSALIIIAHVKEGVDLALKHRLNQRIIDIIQEHHGTSLVR
                     YFYQRALQQHEDALAGGKIMRLREDDVPEVHEESFRYSGPKPQTKESAIISLADAIES
                     ASRSVEKPTPQKIETLVSEIVEERIGDRQLDECDLTLGELKTIADRFRFTLVSMLHSR
                     IAYPKSGQKSAAPRDGTLRPDVMVATRKPETAPPVSAA"
     gene            complement(4268..4843)
                     /locus_tag="VIS53_05750"
     CDS             complement(4268..4843)
                     /locus_tag="VIS53_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY5767319.1"
                     /translation="MTSQEAIESLNKSFERKVQNRTEFRGETTYAIAVSDLRDIAKFC
                     RDEVSFDYLLDITSIDNFGEEPRFEIVYHLYSMPHAVHLRLKLKLSEEVGALDTVSDI
                     WPTADWHEREIYDMMGIKFNGHPDLRRILMWDGYPFFPLRKDFPLAGLPSDMPDVAFT
                     KVTPLEGGPFVTVPSTAGSKDREPRAHPREL"
     gene            complement(4943..5479)
                     /gene="nuoB"
                     /locus_tag="VIS53_05755"
     CDS             complement(4943..5479)
                     /gene="nuoB"
                     /locus_tag="VIS53_05755"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF011390.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HEY5767320.1"
                     /translation="MAATHATAYDSKIEGNVIFTRFDAALNWVRKNSLWPMPMGLACC
                     AIELMATAASRFDISRFGAEVMRFSPRQCDVMIVAGTVTYKMALAVKRIYEQMPEPKW
                     VIAMGACASTGGMYRSYAVLQGIDQLLPVDVYISGCPPRPEALLAGLMKLQEKISGER
                     AFTDQAPRLAERLEEALT"
     gene            5598..>6667
                     /gene="sat"
                     /locus_tag="VIS53_05760"
     CDS             5598..>6667
                     /gene="sat"
                     /locus_tag="VIS53_05760"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HEY5767321.1"
                     /translation="MNIDTAKSHGHLVAPHGGELVDLKLDEENAAELKGRSKDFPSWD
                     LTSRQIRDLELLLSGGFSPLRGFMNRDEYERVCHEMRLSNGLLWPIPITLDVPEAFAK
                     SLKPGSSKVALRDSEGVMLAVLYVEDVWQPDRKAEAQAVFGTTSAIHPGVDYLLNKGH
                     GWYVGGRVEGLQLPTHYDFRTLRLTPSDLRAEFVQLGWRKIIGFQTRNPMHRAHVELT
                     FRAASQVEASLLIHPSVGMTRPGDVDYFTRVRCYQLLVSKYPRGTAKLALLPLAMRMG
                     GPREAIWHAIIRKNHGCSHFIVGRDHAGPGNDADGKPFYGPYEAQELFRKHQAEIGVE
                     MVPFQMMVYVEDRDKYFPENEVP"
BASE COUNT         1542 a         1764 c         1872 g         1489 t
ORIGIN      
        1 cgattctcca gtcacctcca cgacggggac cggcgcctcc ggcgagatgc ggccgacctt
       61 tccccacaca aattcgtcaa gcatcagatc gccgatgacg gtgattcgcc tcgaagccgc
      121 gcgctcaagg atctgctcca gccggtccaa tttcatggcg atttgagact tagacactga
      181 tggctcaaat cgctttcgga tttgcgactt gaacggatga atgagatggg tgttggcatt
      241 agttgtgtcg gtcggagttc cggttaagat tcgctccatt aaatcctgaa tactaagccg
      301 aaatcaacag tcgaaagtgc caatgatgcc gttaatgaga tattttaaaa cagtgggtgt
      361 tgtctgcggt tttgccattt gcgcgaatgc cgcgcaggcg ccacagcaga tcaacattaa
      421 acaattatcc acaaccgtgg aagacgttgt ggtgccattg cctaacgaga tttttggtgc
      481 gctgaacaaa ctgggtgggg tgaactggag ggcacatgtc cgcagtgata agggaccgaa
      541 cttcaccgag cgtccacgta ttgccctttt gcttgggaca gtaattgcag atggttttat
      601 cgctgtgcag gcggaagacg cagaaaccgt gaaggatatt gggcagcgtg tcacgacgct
      661 ggcgaaaggt atcggcgtag gaaattcgat cacaccgcat gcgaaggcga tcattgaggc
      721 agcagacaag cggaattgga acaatgtgcg ccgggaactg gatcgcacgc agaacagcgt
      781 acaacaagca atgaacgagg tgcacgatga aaagttgtcg cagctcgtta gcttgggtgg
      841 ctggctgcgc ggaaccgaag tattgacatc agtggttaac gaacattttt ccgcggacgg
      901 cgcagagctg ctgcaccagc ctgatctgct gtcttatttt gaaaaaagac tgcaggggat
      961 gccggaattt gatcttccaa ttatccacca aattaaggat ggtctggtcg aggttaaacc
     1021 cttgatcgat atcggtgatc gccggattcc gcctgagaca gtgaagaagg ttaatgagat
     1081 cactacgcga ctgggccagg ggatcgtcac caaggattaa agcttccatg aaccgctttg
     1141 tgaagatttt cgtccgtaca agctctctgc tgctgattct cacagcattg cgcccttcga
     1201 tttttgcttc ggtcgacgac gcgcaatcgt ttgcccttca ggccgccgaa ccgtacgtca
     1261 aacaaggctt ccaagtgcgc gaggattatt ggggaggaga cctcggttct ggcgagaaga
     1321 aagctgtgcg acagcagttg ttcaaaggaa acgaatactg gttttggctc ggaaccgaag
     1381 tcgacaaggc aaaggtatct gttcacgttt acgattccga cggcaagctc gcggaagaac
     1441 cggacagctg ggagaaaggg cacttcgccg ctgcacatgt gataccaaaa acgacaggca
     1501 gttattttat cattgtgagc gtggaacaat cgccagagga ccgcacgcac tgggcgctgg
     1561 tgtatggttt ccgctagctc tagaattcgt ggcagcggcc acgattatga ctgaatcgcg
     1621 gactttgcag ttcgaaagcc cacgcgcgtt gcagtcgctc tacgcgaatg acattaagct
     1681 tttaaagcat ctcgaggatt cgttaggcgt caaactgacg acgcgcgaag gctgggtgaa
     1741 actcgaaggc gacccgagtc ggatcgacaa ggcccagcag gtatttcaac agcttgagca
     1801 agcccggcaa caaggcgttg acattcagaa acacgagttc aattacacgc tcaagaccgt
     1861 gactgaagaa cgcgacgaga gtctcgccga tattgtttcg accaaaatcg taacttcttc
     1921 ccgcaagcct cctgtcgtag cacggagtgt caatcagcga gcatacgtgg aggcgattca
     1981 gaagcatgac gttgtcttcg ggattggacc ggctggtacg ggcaaaactt atcttgctgt
     2041 tgcgatggca gtagcggcat taaagaagga acaggtcgcc cgtattattc taacccgacc
     2101 tgcggtagaa gcgggggaag cactgggttt tctgccgggc gacttggaac aaaaggtcct
     2161 cccgtattta cgcccacttt atgatgcatt acgtgagatg cttgagccgg aagaaatgga
     2221 gcgggcgatc gcacggcaaa cgatcgaagt ggctccgctt gcgtatatgc gtggacgtac
     2281 tttgagcaat gcttttgtca ttcttgatga agcccaaaac acaaccactg agcagatgtt
     2341 catgttgctg acgcgcatcg gtttgaattc caagtgcgtc gtgaccggcg acgtcacaca
     2401 gattgatttg cccgcaaaca agcggtcagg tgtgctcgag gccttacagg ccttaaagaa
     2461 tgtgccggga atcgcgacgg tatacttcac cgagcgcgac gttgtgcggc atgaactggt
     2521 gcgcgccatc atcggcgcat atcagtccca ccgcgggccc gcctccgaat ctcgcaaata
     2581 aacgattacc atgttcgatt tcctcaaacg cggccggctc gtcaaacggg gcctggcatc
     2641 gcccaaacgg cggcgccggc ggcctcgcag tgagctgatg cgcaatgtgg aatgctcgtc
     2701 gcatgtaaag gtcttcatct ttgcgctgtt tgccggtggc ctggcgtttc tcgtctttag
     2761 cggtcaacaa gcggagccga cgaagaatta catcattgcg ctcctggtcc tggccaccgc
     2821 gatcacgcag ctttggatca atcagcccaa gagcttcgag cagaactcgc gaattcttct
     2881 cgtcctcggc gttatttttg tgcaactggc ggtcaccaaa ttgctgctgg tcgtttgcaa
     2941 cagtggcaat taccgcttct tgagaccaga aacggccgga ttgattacgc catacgcttt
     3001 tgcgccgctg gtgctgagcg tgttgctcaa ccggcagcac ggcctttacg cagcgttctt
     3061 tgtgagcctg tggagtagca tgctgtttgg tcctatcgat gcgcctcttt taatcaccag
     3121 tctgatcagc ggatttacag ctgtctctct cacgctgcag gtgcgacgtc ggagtcgatt
     3181 gatccgcgcc ggtttcttcg tcgggctcgc catctggttg ttgtcgctga cgttcggttt
     3241 gatcgggcca attaactggt tttatccgac ggctaatgac tggggcatgg tcggagtgca
     3301 aagcgctctt gccatcggca acggcattgt caccgcgatg atcgtgggcg gcgcgttgcc
     3361 gatgctcgag aatctgtttg gaatcacaac cgacatttcc tggttggaag catcagatct
     3421 taatcacccg ttgttgcgtc gaatgacaat cgaagcaccg ggcacgtatc accacagcct
     3481 tgtggtggcc aatctcgccg aagccgcggc ggaagccgtc ggcgccaatg cgaccctctg
     3541 ccgcgtctgc tcttattttc atgacgtcgg caaactggtg aaaccggaat acttcacgga
     3601 gaacatgagc ttcgagcgaa atcctcatga tgatctggcg ccaacgatga gcgcattgat
     3661 catcatcgcg cacgtcaaag agggcgtaga tctcgcgctc aagcatcgac taaaccagcg
     3721 catcatcgac attattcagg aacatcacgg cacatcgctc gtgcggtatt tttatcaacg
     3781 cgctctgcag cagcatgagg acgcgctcgc aggtggcaag attatgagac tgcgcgaaga
     3841 cgacgttcct gaggtgcacg aagaaagctt tcgttacagc ggaccaaaac cgcaaacgaa
     3901 ggaaagcgcc attatcagcc ttgccgacgc aatcgaaagt gcttcgcgca gtgtggaaaa
     3961 acccacaccg caaaaaatcg aaacgcttgt aagcgagatc gtcgaagaac gcatcggcga
     4021 ccggcaactg gacgaatgcg atctcactct cggcgaactg aaaacgatcg ccgaccgatt
     4081 caggttcacg ctcgtgtcga tgttgcacag ccgcatcgcc tatccgaaat cgggacaaaa
     4141 gtccgcagcg ccgcgcgatg gaactttgcg gccagacgta atggtcgcca cgcgcaaacc
     4201 ggaaacagcg ccgccggtct cagctgcttg atgtgatcga agaaacgagg cgtttggcaa
     4261 ggcgccccta tagttcgcgc gggtgtgcac gcggctcccg atccttggaa ccggcggtgc
     4321 tcggaactgt gacgaagggg ccgccttcga gcggtgtgac tttggtgaag gcgacatcgg
     4381 gcatatcgct cggcaagccc gcgagcggga aatccttccg caacggaaag aacgggtagc
     4441 cgtcccacat caaaatacga cggagatcgg gatggccgtt aaacttgatg cccatcatgt
     4501 cgtaaatctc ccgctcgtgc cagtcggccg tcggccagat gtctgaaacg gtatcgagcg
     4561 ccccaacttc ttccgacagt ttcaatttca atcgaaggtg gaccgcatgc ggcatcgagt
     4621 acagatgata aacaatttcg aaacgtggct cttcgccaaa attatcgata ctggtgatgt
     4681 cgagtaagta atcgaatgag acttcgtctc ggcagaattt tgcgatgtcg cggagatcgc
     4741 ttacggcgat tgcgtacgtc gtttcgccac gaaattcagt tctgttttga acctttcgtt
     4801 caaatgattt gttcaacgac tcgattgctt cctggctggt catctgctta tgatgttgta
     4861 ggacaggcgc tccgcctgtc agcaacagga gatgaggcaa gcgatgcgct tgccctacaa
     4921 ttcgaatcta cagagcatgc aatcatgtca gcgcttcctc gagtctttct gccaaacgcg
     4981 gcgcctgatc tgtgaacgcg cgttcgcctg aaattttttc ctgcaatttc atcaagccgg
     5041 cgagcaacgc ttccggccgc ggcggacagc cagagatgta aacgtccacg ggcaagagct
     5101 gatcgatacc ctgcagcaca gcgtaggagc gatacatccc gcccgtggag gcgcatgcgc
     5161 ccatggcgat cacccatttt ggttccggca tttgctcata aattctcttc actgccagcg
     5221 ccatcttgta cgtgacggtg ccggcgacga tcatcacgtc acattgacgc ggcgagaagc
     5281 gcattacttc cgcgccgaag cgcgaaatat cgaatcgtga tgcggccgtg gccatcaact
     5341 cgatggcgca acaggccaac cccatcggca tcggccaaag cgaattcttc cggacccaat
     5401 tcagcgccgc atcgaaacgg gtgaaaatca cgttcccttc gattttggaa tcgtaggccg
     5461 ttgcatgtgt tgctgccata ccagacgtta aaataccagt ttggacacgc aactctcgtt
     5521 gtgaatgtgg ttcttggtca cttagccggt catgattgcg acgtcccgct ctcaatagta
     5581 tagaagcgct cttcctaatg aatatagaca ctgcaaaatc tcatggccat ctagttgccc
     5641 cgcatggcgg cgaactggtg gaccttaagc tcgacgagga gaacgcagcc gaactcaagg
     5701 ggcgctccaa ggattttccc tcctgggacc tgaccagccg gcagattcgc gatctcgagc
     5761 ttctcctgag tggcggcttc tcaccgttgc gcggtttcat gaatcgcgac gaatacgagc
     5821 gcgtctgcca tgagatgaga ttgagcaatg gcttgctttg gccgatcccg attacgctcg
     5881 atgtgccgga agcgtttgcg aaatcgttga aacccgggag cagcaaggtc gccctgcggg
     5941 actcggaagg cgtgatgctt gcggtgttat atgtggagga tgtatggcag ccggatcgca
     6001 aagccgaagc gcaagctgtt tttggaacca ccagtgcaat ccatcccggt gtcgattatc
     6061 ttctgaacaa gggacatggc tggtacgtgg gtggacgcgt ggaaggtttg caactgccca
     6121 cgcattacga tttccggact cttcggctta caccgtcgga cctgcgcgcg gagttcgtcc
     6181 agctagggtg gcgcaagatc atcgggttcc agacgcgtaa tccgatgcat cgcgcgcacg
     6241 tggaattgac gtttcgcgcc gcgagccagg tcgaagcaag ccttctgatt catccatccg
     6301 tcggtatgac ccgtcccggc gatgtggact acttcacgcg cgtccgttgc tatcagttgc
     6361 ttgtctccaa atatccacgc ggcacagcaa agctggcttt attgccgttg gcgatgcgga
     6421 tgggcggacc gcgggaagcg atctggcacg cgatcattcg aaaaaatcac ggctgctctc
     6481 atttcatagt cggtcgcgac cacgcggggc caggcaacga tgccgatggc aagccattct
     6541 acggaccgta cgaagcgcag gagctgttcc gcaaacacca ggcggagatc ggcgtcgaga
     6601 tggtgccgtt tcagatgatg gtctatgtag aagacaggga taaatatttc cctgaaaacg
     6661 aagtgcc
//
LOCUS       DATDAJ010000234         3505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1322140, whole genome shotgun sequence.
ACCESSION   DATDAJ010000234 DATDAJ010000000
VERSION     DATDAJ010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1322140"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VIS53_05765"
     CDS             complement(<1..512)
                     /locus_tag="VIS53_05765"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5767322.1"
                     /translation="MTFGAPVWLWGLLLVPLLIALFVHSEHRGLKRLQLFVSARLLPQ
                     LAGTVKRRRRTVRFGLLLLGLALAIVSLAQPRLGYTFQDVKRKGLDLLVAVDTSRSML
                     SNDVQPSRLDRVKLAIQDLLDELQGDRVGLIAFAGRAFLQAPLTIDYDAVVEAVNDLD
                     TKTIPEGGSN"
     gene            complement(700..1755)
                     /locus_tag="VIS53_05770"
     CDS             complement(700..1755)
                     /locus_tag="VIS53_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY5767323.1"
                     /translation="MTNFSDWFPANSALTFARPWLLLLLLTIPLLAWLRGKSGPAAAL
                     TYSSTTSLQAIGKKSAARVGKILRALLFLALAFFVIALARPQLGKSLTQIEASGIDIM
                     LVLDVSGSMLTKDFTIGGQEATRVDAIREVTRKFIEARPNDRIGIIAFAGRPYVVSPM
                     TLDHDWLLQNLDRVKIGLVEDGTAIGSAMASASNRLNDKRSKSHVLVLLTDGENNAGK
                     IPPKTAAEAVKALKVHFYAIGAGINGIAPAPIYTSRGPLTDALGNILYENQRVQFNET
                     GLREVAKIADGKFFRATDIESLEQIFNDIDKLEKSTVSVKKYQQYRDLFPLCLMGGCG
                     LLVAQLLLSQTIWKKLP"
     gene            complement(1783..2286)
                     /locus_tag="VIS53_05775"
     CDS             complement(1783..2286)
                     /locus_tag="VIS53_05775"
                     /inference="COORDINATES: protein motif:HMM:NF025674.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4381 family protein"
                     /protein_id="HEY5767324.1"
                     /translation="MYFFAAEEFHDIAPPVDYSLIPPWLVFVIAFVVLSLLGLVVWWF
                     VKRRKPESPPKAPREIALEELEQIRPEIQRMSPYQFSIRVSDILRRYVTQQYGVPATR
                     QTSIEFLTAAAKAPSFSADDKLLLEDFLNRCDLIKFAKYEATMSDSELLLEEAIRFVK
                     GGQLATV"
     gene            complement(2418..3365)
                     /locus_tag="VIS53_05780"
     CDS             complement(2418..3365)
                     /locus_tag="VIS53_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEY5767325.1"
                     /translation="MPSKPSTHPASSRSVRDDERAEKTTEILKKIRTLEIKTRGLVET
                     AFAGDYHSVFKGRGMNFEDVREYQPGDEIRAIDWNVTARMGTAFIKKFTEERELTVML
                     VVDVSASGNFGSTTQSKRELAAEVACLLAFSAIRNNDKVGLLLFTDRVELFIPPKKGR
                     SHTLRIIREILFFEPQGRGTEPGLALDYLNKIVTRRAVVFFISDFQAPDFSRALAVSG
                     RRHDFIAIQIQDERERTLPNVGIITLEDAETGEQIEINTADRKTRTLFTDLVTGFETE
                     LSRTLRRNNVDTITLQTGRDYLPPLRSFFKQRERRLGVR"
     gene            complement(3365..>3505)
                     /locus_tag="VIS53_05785"
     CDS             complement(3365..>3505)
                     /locus_tag="VIS53_05785"
                     /inference="COORDINATES: protein motif:HMM:NF036831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEY5767326.1"
                     /translation="YVTPQDVKSIGPDVLRHRIIVSYEAEAEAVTSETIIERIFAGLP
                     VP"
BASE COUNT          820 a          965 c          901 g          819 t
ORIGIN      
        1 atattgctgc cgccttccgg gatggttttt gtgtcgaggt cgttaacggc ctcgaccacg
       61 gcgtcgtaat caatcgtaag cggcgcttgc agaaacgcgc gccctgcaaa agcaatcaaa
      121 ccgacgcggt caccctgtag ttcgtcgagc aaatcctgaa tcgccagttt aacgcgatcg
      181 agccggcttg gctggacgtc gttagataac atgctgcgcg aggtgtccac ggccaccagc
      241 agatccagtc ctttacgctt tacgtcctgg aacgtgtaac ccaaacgcgg ttgcgccaga
      301 ctgacaatcg ccagtgcaag gccaagcaat agtaaaccaa atcttacagt gcgccgccgc
      361 cgtttgacgg ttccagcgag ctgcggcaac agtcgcgcgg aaacaaacaa ctgcagccgc
      421 ttcagtccgc gatgttccga gtgcacaaag agcgcaatca agagcgggac gagcaacaat
      481 ccccaaagcc atactggtgc gccgaaggtc atgggttcgt ataagcgttg aaggattgaa
      541 ccgttgaagc gttcagcacc ggtgtcattc tgagcgaagc gaagaatctc tgatgtctga
      601 ttccggcagc gcttgaaggc aaaatccgag atgtttcgct tcgctcaaca tgacaggatg
      661 ggcgcttcaa cgcttcaacg gttaaacgct tcaacattct cacggtaact ttttccaaat
      721 cgtttgggac aaaagcagtt gcgccaccaa cagcccgcac ccgcccatca gacacagcgg
      781 aaagagatca cggtattgct gatatttttt cacgcttacc gtcgacttct ccagtttgtc
      841 gatgtcgttg aaaatctgtt ccagcgattc aatgtcagtg gctcggaaaa atttgccgtc
      901 ggcgattttc gcgacctctc tcaaaccggt ttcattaaat tgtacgcgct gattttcgta
      961 gagaatgttt cccaaagcat cggtcagcgg tccacgactg gtgtagatag gcgccggcgc
     1021 gattccattt attccagcgc cgatcgcata gaagtgaacc tttaatgctt tcactgcctc
     1081 ggcggcagtc ttcggaggaa ttttgccggc gttgttttca ccatccgtca acaaaacgag
     1141 aacatggctc tttgaacgtt tatcatttag ccgatttgaa gccgatgcca tggccgatcc
     1201 aatcgcagtg ccgtcttcga cgagaccgat cttcactcga tccaagtttt gcaaaagcca
     1261 atcgtgatcc agcgtcatcg ggctcacgac atatgggcga ccggcaaacg caatgatgcc
     1321 gatgcgatca tttggacgag cttcgatgaa ttttcgcgtg acttcgcgaa tggcgtccac
     1381 gcgtgtcgct tcctggcccc caatcgtgaa atctttcgtc aacatcgagc cggaaacgtc
     1441 cagcacgagc atgatgtcga tgccgctcgc ctcgatctgc gtgaggctct tgccgagttg
     1501 cggccgcgcg agagcaatca caaagaaagc caaggctaga aaaagcagcg cccgcaggat
     1561 tttaccgact cgcgcagcgc tctttttgcc gatcgcttgc agactggttg tagaggagta
     1621 cgtcagcgcc gcagcaggcc cgcttttgcc gcgcaaccac gcaagcaacg gtatggtcag
     1681 caataagagg agcagccacg gacgcgcaaa cgtcaacgcg ctattcgcag ggaaccaatc
     1741 agagaagttt gtcatgccga gcggagttta gagatctgtg gattaaacag tcgcaagttg
     1801 gccgcctttc acaaagcgga ttgcttcttc tagcaacagt tcgctgtccg acattgtcgc
     1861 ttcgtacttg gcgaatttaa tcaggtcgca gcgattcaaa aaatcttcga gcaacaattt
     1921 gtcatctgcg gaaaacgatg gggcttttgc cgcagcagtg agaaattcta tcgacgtttg
     1981 tcgagttgcc gggacgccat attgctgggt cacgtaacgc cttaaaatgt cggacacccg
     2041 aatgctgaac tgatacggac tcattctctg aatttcaggc cgaatttgtt cgagttcttc
     2101 cagggcgatt tcgcgcggcg cctttggcgg cgattctggt ttccgccgct tcacaaacca
     2161 ccacacaacc aaaccgagca gtgacaggac gacaaacgcg atcacaaaaa ccaaccacgg
     2221 aggaatcagg gaataatcca ccggtggcgc gatatcatgg aactcttcag cagcgaaaaa
     2281 atacatattc attgtctagc ccgcggtcat tccgagcgaa ttcgaggaat cctttgatga
     2341 caccgttgag ctattctgcg ggatccttcg actactctgc gcttcgctca ggatgactag
     2401 ctggtgcact tcacccctta tcgaaccccg agccggcgtt cgcgttgttt aaaaaacgag
     2461 cgcaacggcg gcagataatc tctgccggtt tgcagcgtga tcgtatcaac attgttccgt
     2521 cggagcgtgc gcgaaagctc cgtttcaaag ccagtaacca gatctgtgaa aagtgttcgc
     2581 gtcttgcgat ctgccgtatt gatctcgatc tgttcgcccg tctcggcatc ctccaacgta
     2641 atgatgccca cgtttggcaa cgttctttcg cgctcgtcct ggatctgaat tgctatgaaa
     2701 tcgtgccgcc gcccactcac cgcgagtgcc cgcgagaaat caggcgcttg aaaatccgag
     2761 atgaaaaata caaccgcacg tcgagtcaca attttgttga ggtaatcgag tgccagtccg
     2821 ggctccgtgc cgcgtccctg cggttcgaag aacaaaatct cgcggataat acgcagcgta
     2881 tgcgaacgac ccttcttcgg cggaataaac agctcaacgc gatcggtgaa cagcagcaag
     2941 cccaccttgt cgttgtttcg aatggcgctg aatgcgagga gacaggccac ctcggccgcg
     3001 agctcacgtt ttgattgtgt agtgctgcca aaatttccgg aagcgctcac atcgacgact
     3061 aacatcactg tcaactcacg ttcctcggtg aattttttta tgaacgcggt gcccatccgc
     3121 gcagtgacgt tccaatcgat cgcgcgaatt tcgtcgccag gctgatactc acgtacgtct
     3181 tcaaagttca ttccgcgtcc tttgaaaacg ctgtggtaat cgccggcgaa cgcggtttca
     3241 accagaccgc gggttttaat ctcaagtgtt ctaattttct tgagaatctc ggttgttttc
     3301 tcagcccgct cgtcatctcg aacggatctg ctggatgcgg gatgggtcga gggttttgat
     3361 ggcatcacgg cacaggcagt ccggcaaaaa ttcgctcgat gatggtctca ctcgtcactg
     3421 cctcggcctc agcttcgtag ctgacgatga tgcgatgtcg caacacgtcg gggccgatgc
     3481 tcttcacgtc ctgtggcgtg acgta
//
LOCUS       DATDAJ010000235         3399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1333724, whole genome shotgun sequence.
ACCESSION   DATDAJ010000235 DATDAJ010000000
VERSION     DATDAJ010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3399
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333724"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            375..551
                     /locus_tag="VIS53_05790"
     CDS             375..551
                     /locus_tag="VIS53_05790"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HEY5767327.1"
                     /translation="MKRKFHVTLLEHDEGVSVSCPELPGCHSQGANVEDARANIEDAI
                     RGYIDLYGETQSLS"
     gene            complement(548..1969)
                     /locus_tag="VIS53_05795"
     CDS             complement(548..1969)
                     /locus_tag="VIS53_05795"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEY5767328.1"
                     /translation="MLEPSADEIREWGDSVIQFMTDYLGGLRDRPAYRHTSSREIRSG
                     IDSELPIKGTDFDSLLKVFCDTIVPFSRQNAHPRMFGYVQSPGTPIGAFADLLASTLN
                     ANLTIWRSAPAPVELERLTIDWIRQILGFNPEAGGLFVSGGSMANLAALAAARQTKYD
                     SLGRLRMYASSATHFSIIKAAALLGIGRENVQHVAVDERFRMRVDDLVAKINADLEAG
                     DVPFCVVGNAGTVDTGAVDPLREIREIADRLQLWMHVDGSYGAFAILAQSGKKLFAGM
                     EEADSIALDPHKWLYLPVDVGCVIYRNPEIARAAFAHEAEYTRMFGEEADEAFVCWDY
                     GPELSRRFRALKVWMLLKGVGLDRLSEAIESNLACARHLESMVQASDDFEMVAPVELS
                     IFCFRHVPAQLRNQPAEAIDAFNERLLVALQRDGSSYLSNATLGGRFALRGCVLNYRT
                     TLRDMEILLDDLRRVGKSLPSSV"
     gene            complement(2076..2285)
                     /locus_tag="VIS53_05800"
     CDS             complement(2076..2285)
                     /locus_tag="VIS53_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767329.1"
                     /translation="METIASKDPRAHTANVRKEFRELIEHLRGDINKIDEPKAQALFE
                     TAAEVIRGLDTAFKDYEEKSERAWK"
     gene            2311..2922
                     /locus_tag="VIS53_05805"
     CDS             2311..2922
                     /locus_tag="VIS53_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767330.1"
                     /translation="MQTHQIRNPSYFFLLPSYHYSVPIIVFALLLFVLFAFAGVVVLS
                     LALRYRAGTARRQARCWVASLNVWMTSFSAVFFLAFTFLLSFWVDSAFRFALFGMGCG
                     SILGLVGLGMTRWENHPQGLFYTPSRWLALFVTLAIAARFVYGWWRATHSGSSAPGDQ
                     HWLITASGTQLSLAVAAGLIGYYLAYSVGVRLRVARHEQRRFS"
     gene            complement(2996..>3399)
                     /locus_tag="VIS53_05810"
     CDS             complement(2996..>3399)
                     /locus_tag="VIS53_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767331.1"
                     /translation="APPATASADEFSTDRLRDYVAAFVLAGLDKNVGAEAEFFADRVE
                     YYDQGVMDREKIREDLKRYDERWPERHFWVAGKINVEPQSENRVRVTFPMGFKLRNGN
                     KQSSGKVDKTLVLESAGDDLQIVAVNERKAG"
BASE COUNT          706 a         1010 c          899 g          784 t
ORIGIN      
        1 cacagccgga tcgcgaagac gaagccgtgg cgaccgcgcc gaaagatcaa tctcaaacgt
       61 agtaggccag tccgttgttc gttcgctgct gtagcgcccg ctgtctcagc ggaaactgta
      121 gggcgtctct gcgagacgcc aggagtttgg cacagcggag cgcggcaggg gcgccagcaa
      181 cacagacggg aagccccgac agagcgagct tcgcgggcgc gagcgagtca aacgcctcca
      241 caacaattct gcgttcctgc tttcctgagc gataacgtag atagaagtca gtagcgtgtc
      301 tgccgtctcg cagagacgcc ttcgagctaa ggccggcggt tgacgctcgc gcgtgcgaaa
      361 cgtacgctta tccggtgaaa cggaaatttc acgtaacact gcttgagcac gacgaaggcg
      421 tatccgttag ttgtcctgaa ttacctggat gtcattcgca gggcgcaaac gttgaagatg
      481 cgcgtgcaaa tatcgaagat gcaattcgcg gttacataga tctttatgga gaaacccaat
      541 cgctttccta gacagaactc ggtagcgatt ttcccacgcg tcgcaaatcg tcgagcagga
      601 tctccatgtc gcgcaaagtc gtccgatagt tcaacacaca accgcgtaag gcgaagcgac
      661 cgccgagcgt ggcattggag agatacgagc tgccatctcg ctgcagtgcg accagcaggc
      721 gctcattgaa ggcatcgatt gcttcagcgg gttgatttct gagctgcgcc ggcacgtggc
      781 gaaaacaaaa gatcgataac tcgaccggcg cgaccatctc gaagtcatcg ctggcttgca
      841 ccatcgactc gagatggcgc gcgcacgcaa gattgctttc aatcgcctcg ctcaagcggt
      901 cgaggcctac accttttaat agcatccata ctttgagcgc ccggaaacgc cgggacagtt
      961 ccggcccgta gtcccagcat acaaacgctt cgtctgcttc ctcaccaaac atccgggtgt
     1021 attccgcctc atgagcaaaa gcggcccgcg caatctcagg gttgcggtaa atcacgcagc
     1081 caacatccac cggcagataa agccatttgt gaggatccag cgcgatcgaa tccgcctcct
     1141 ccatgcctgc gaataatttt ttccccgatt gggccagaat agcgaacgca ccataacttc
     1201 catccacatg catccagagc tggaggcggt ctgcaatctc tcgaatctcg cgtaagggat
     1261 cgaccgcgcc ggtatccacg gttccggcat tcccaacgac gcagaatggc acgtcgccgg
     1321 cctccagatc agcattgatt tttgcaacaa gatcgtcgac ccgcattcta aagcgttcgt
     1381 cgaccgccac gtgctgcacg ttctcccggc caattcccaa aagcgccgct gccttgatga
     1441 tggaaaaatg cgtcgcgctc gacgcataca tgcgcagacg gcctaacgag tcatatttcg
     1501 tctggcgagc cgcggccagt gcagcgagat tggccatcga tccgccgctg acaaaaagcc
     1561 cgccggcttc aggattgaat cccagaattt gacggatcca atcgatcgtc aggcgctcca
     1621 gttccaccgg cgctggtgcc gaacgccaga tggtgagatt ggcgttcaaa gtcgaagcaa
     1681 gcagatctgc gaacgcaccg attggcgtcc cgggcgattg cacatagcca aacatccgcg
     1741 gatgcgcgtt ctgccggcta aacggaacga tcgtgtcgca aaaaactttc agcagcgaat
     1801 caaaatcagt acccttgatc gggagctccg agtcgatccc gcttcgaatt tcgcgtgaag
     1861 aagtgtgccg atacgccggg cgatcgcgaa gcccgccgag gtaatcggtc atgaattgga
     1921 tgaccgaatc gccccattcg cgtatttcgt cggctgacgg ctcaagcatg tccgcgtatt
     1981 acactcgcaa agaatatcgc gcgcaaatta ggcactatgg atggtagggc gaccgccggg
     2041 cgcgccgagt tcacccgtca ctcgtcccta tccattcact tccaggcccg ctcgctcttc
     2101 tcttcgtaat ctttgaacgc tgtgtccaga cccctaatca cttcggcagc ggtttcgaag
     2161 agcgcctgcg ctttcggttc atctattttg ttaatgtcgc cgcgcagatg ttcgatcagt
     2221 tcccgaaatt ccttccgaac attcgcggta tgcgcccgcg gatctttcga tgcaatcgtt
     2281 tccatataat gcgttcgcct gtggaagcac gtgcagacgc atcagatccg gaatccttct
     2341 tactttttcc tgcttccttc ttaccattac tcagtgccga tcattgtttt tgcgctgctg
     2401 ctttttgttc tgttcgcctt tgccggggtg gtggtgcttt cccttgcttt gcgttaccgc
     2461 gccggcactg ctcgacgaca agcacggtgc tgggtcgcca gcctgaatgt gtggatgaca
     2521 agcttctcgg ctgttttctt tctggcattc acgtttctgc tctccttctg ggtcgactca
     2581 gcgtttcgat tcgctctgtt tggtatgggt tgtggaagta ttctcggctt ggtcggcctg
     2641 gggatgaccc gttgggaaaa ccacccgcaa ggactcttct acaccccgag ccgctggctc
     2701 gcgcttttcg tcacgttggc gatcgccgcg cgtttcgtct acggttggtg gcgcgccacg
     2761 cattccggca gcagcgctcc tggcgatcag cattggctga tcaccgcctc cgggacccag
     2821 ctttccctgg cagtcgctgc tggattgatc ggttattatc tcgcgtactc cgttggagtg
     2881 cgtttgcgcg tcgcgcgcca cgagcaacgg cgattcagtt aaatgaatta cgaaacgagg
     2941 aaagctttat ctgcgaacaa cagaatgatt ttcctgcttt ccttatcaat tcttcctagc
     3001 cggctttgcg ttcgttcacc gcgacgattt gcagatcgtc gccagccgat tccagaacaa
     3061 gcgttttgtc cactttgcca gatgactgct tgttgccgtt tcgcaatttg aatcccatcg
     3121 gaaacgtcac ccgcacccgg ttttcacttt gcggttcgac attgatcttg cctgcgaccc
     3181 agaagtgccg ctccggccat cgctcgtcgt agcgttttaa atcctcacga attttttcac
     3241 gatccatgac cccttggtcg taatactcga cgcgatcggc aaaaaactcg gcttcggcgc
     3301 cgacgttctt gtcgagtccg gccaggacaa acgcggccac ataatcacgc agacggtccg
     3361 tgctgaattc atcggccgaa gctgtagccg gcggcgctg
//
LOCUS       DATDAJ010000236        15994 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1337218, whole genome shotgun sequence.
ACCESSION   DATDAJ010000236 DATDAJ010000000
VERSION     DATDAJ010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 15994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15994
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1337218"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..780
                     /locus_tag="VIS53_05815"
     CDS             <1..780
                     /locus_tag="VIS53_05815"
                     /inference="COORDINATES: protein motif:HMM:NF005746.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HEY5767332.1"
                     /translation="TLNSQLSTMNFRLRVWRQRDAKISGKLTDYEVRDISPDTSFLEM
                     LDILNENLLRAGGEPVAFDSDCREGICGTCSLTVNGEAHGPDHPGAVCELYMRKFRDG
                     ETITVEPFRVGSFPIVKDLVVDRSALDRIVQAGGFISARAGSAPEANSILVPKHDADL
                     AMEAAACIGCGACAAACPNGSAMLFAAAKVSHLSFLPQGTPERERRVLKMVQVMDDQG
                     FGNCTNTYECEAVCPAKISASFIAKLNREYARAQFCQRLGE"
     gene            complement(841..1674)
                     /gene="ispE"
                     /locus_tag="VIS53_05820"
     CDS             complement(841..1674)
                     /gene="ispE"
                     /locus_tag="VIS53_05820"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEY5767333.1"
                     /translation="MQVIAPAKINLSLRVLGHRSDGFHEIETFIAPISLCDEIKIEQR
                     PGKQEIAFRCDDPSVPKGEDNIVVRAANIFFEEAKITGGLSIELKKRIPHGAGLGGGS
                     SDAASTLLALNKLFETNLPREVLAKMAEMIGSDVPFFIFQSAAVCKGRGELVSPTRLR
                     EELSVLLLKPEFGVPTQWAYSRWRDSREIPGVSYGVQQLTQQSVVNDLERPVFEKFVF
                     LAQLKMWLLKQPEVGAALMSGSGSTAFAVLRSNADADSLAKRAKAELDPELWTCVTRT
                     L"
     gene            1729..2421
                     /gene="pyrF"
                     /locus_tag="VIS53_05825"
     CDS             1729..2421
                     /gene="pyrF"
                     /locus_tag="VIS53_05825"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF001273.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEY5767334.1"
                     /translation="MTTVADKIIVALDVATKERALALVEQLGGEISFFKIGLQLYTAE
                     GPEIVRAVLATDAKVWLDLKLYDIPNTVARAVESASTLGVQMLTIHLSGGSEMIRAAT
                     AARASDMLLLGVTVLTSATEQTLREIGITDDVEDQVLRLAKLGAEAGIDGVVASPHEI
                     RHLRRELGDRIKIAVQGIRPTWADPGDQKRFMTPREAIQAGADYIGIGRPITGHAQPR
                     EAVKMILDELHS"
     gene            2508..3203
                     /locus_tag="VIS53_05830"
     CDS             2508..3203
                     /locus_tag="VIS53_05830"
                     /inference="COORDINATES: protein motif:HMM:NF015084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767335.1"
                     /translation="MTEQLFARLDICYDVATHSAAMNMAIDETLLETAVGPTIRFYRW
                     RSPALSFGYFGKFADVATYVEARDLVRRWTGGGIVFHGDDLTYSIVIPASDPVFNESS
                     IAIYEKIHRALCRALAGHNQGAELNVATLDNRRTGDRHSLHNDCFGNPVRADVMMNGR
                     KIAGAAQRRTHRGLLQQGSIQGFTMNCDLASKFAQALSLNCNDFEVSERIFQRAQEIA
                     QQKYGTESWLRKR"
     gene            3324..4376
                     /locus_tag="VIS53_05835"
     CDS             3324..4376
                     /locus_tag="VIS53_05835"
                     /inference="COORDINATES: protein motif:HMM:NF012568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEY5767336.1"
                     /translation="MELFARTDRSTSRRAVAKTGGPPAHRLAEVAKLVQPQLEEVEKR
                     IAQQAAAFDPAIEGYVVYALGSRGKRLRPLLALLAGGATGKIHSGHIDLAVIVELIHL
                     ATLVHDDVMDEAEQRRAKPTANARWGNSLSVLLGDCLFAHALTLSTDFENSDIGRAIA
                     RTATTVCSGEMIQTQRRFDLNLTVEDYLRIVQMKTGSLFSAAAELAAAIREADPKMIA
                     TFKNFGFQIGTAYQIYDDCVDLAGTESMTGKTLGTDLRKGKFTLPVLIFLRSASEFER
                     ERCCQLVLDEKVEEMIELLKNGANNGALNESIAAGSDLIRKAQCAFDGIAPNRYTDAL
                     FSLGDALCDMFDQLRA"
     gene            4454..5149
                     /gene="radC"
                     /locus_tag="VIS53_05840"
     CDS             4454..5149
                     /gene="radC"
                     /locus_tag="VIS53_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEY5767337.1"
                     /translation="MPQLKIREMPQDERPREKLLARGADVLSNAELIAILLRTGRRGM
                     NVVDVARELLDKYKSFAELSRCSVKELSEIKGIGPAKALELVAAFNLGKRFTQESLTQ
                     QKLDSPELIYKLLGDEMRMLRTESLRVVLLDTRYRLMRTESISVGSMNESIAHPREIF
                     RPAITYSAYAVIVVHNHPSGDPSPSQTDHSLTRRLAEAAELLQIKLLDHIVIGAPSGT
                     SSGYFSFKEAGVL"
     gene            5188..6000
                     /gene="lpxA"
                     /locus_tag="VIS53_05845"
     CDS             5188..6000
                     /gene="lpxA"
                     /locus_tag="VIS53_05845"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: protein motif:HMM:NF003657.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEY5767338.1"
                     /translation="MTDKKVHPTAIVDPNAKIGADVQIGPFSIVGPDVTIGEQTIVQS
                     HVVIEDEVAIGRGNFIGHGAIIGVLPQDISFSPERKTKVEIGDDNIIREYCTIHRGSP
                     DGSVTKIGDKNFLMSGAHIGHNCLIGDNVVIANNCLLAGHVRVDDGAFLGGGSTFHQF
                     MHIGRLVMVQGSSGFGKDLPPFVIAAERNSVFGLNIVGMCRAGLSANDRSEIKEAFKL
                     VYLSGLNTSQALEKAETMTFGAPAREFLNFVASAKKRGICPLKRGAGDYVSV"
     gene            complement(6032..6271)
                     /locus_tag="VIS53_05850"
     CDS             complement(6032..6271)
                     /locus_tag="VIS53_05850"
                     /inference="COORDINATES: protein motif:HMM:TIGR01687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HEY5767339.1"
                     /translation="MRVQFYAQLRELIGVHELELELPQGATVRELLEKIYAQKSALRA
                     YDKSILVGADLEFVDRNYKLNSGDEIAIMPPVQGG"
     gene            complement(6274..6837)
                     /gene="hpt"
                     /locus_tag="VIS53_05855"
     CDS             complement(6274..6837)
                     /gene="hpt"
                     /locus_tag="VIS53_05855"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HEY5767340.1"
                     /translation="MRDLQMQGDIERVLFDGPAIHKRIREMAAQITADYSDRELTVIA
                     ILTGSLMFMSDLLRRIPLPLKLDCLSVVSYHGKTQTSGQVIFKHVSLPDVTDRDVLIL
                     DDILDTGHTLAAVRKKLETAKPRSIRVCVLLSKRKERARDVDADYIGFEIDDEFVVGY
                     GLDFMERYRNLPYIGVLRNGLLGQPKQ"
     gene            6990..7409
                     /locus_tag="VIS53_05860"
     CDS             6990..7409
                     /locus_tag="VIS53_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HEY5767341.1"
                     /translation="MHVYHDQLEVRTHDKELYEITDDVQSKIDKSGVQNGTVTVFVQH
                     TSCSIVVMENADPTARRDLEEFFERLVPEDSDYFTHHAEGSDDMPSHIRMVLTRTSET
                     VPIVDGKMQLGTWQGIFLFEHRRAPHRRKLLITMIGE"
     gene            complement(7530..7994)
                     /locus_tag="VIS53_05865"
     CDS             complement(7530..7994)
                     /locus_tag="VIS53_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767342.1"
                     /translation="MKPKMISKMPLSLGLVFVLASAIAQVRGESPAIPPVQLPVVSIH
                     STGDVSRGKTGSFVLDMSQQAPNRGYFPYYPYVNFSVSGTAIPGVDYVTLVSPAYIGP
                     DGYGVILVKTLLDPRGSSYRQGYSVVVTLEPGLGYTLGPSVAAMSAKITIKP"
     gene            complement(8347..9489)
                     /locus_tag="VIS53_05870"
     CDS             complement(8347..9489)
                     /locus_tag="VIS53_05870"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEY5767343.1"
                     /translation="MHLDAEKLRPRLEPLFQENFELFGELGAAVSVWQNGKPLIDLYG
                     GFCDAGREKPWTADTVVLVWSATKGIGSACVLHALQQRKIELHRPVAEFWPEFGQADK
                     DKITLGQLLSHQAGLCVLDQRVDVLDYHGVIRALEAQLPLWPPGTAHGYHARTFGFLL
                     DELMRRVTGKTLSDYWQESFARPLELDFWIGLPEKENSRVATIYAAKSGKPPEPAQFY
                     RDLVTPGTLARKTFTSPYGLNVISKMNDPHIRVQPNVSFGGIGSAWALAKFYSILANG
                     GKFNGQTFFSPKTIEPMTTTLSDGIDRVFQIPTAFSAGFMKDSRDAARRMFGLSATSF
                     GHPGAGGSHAFADSENKIAFAYVMNQMEQSVLPTEKSLRLVDAIYG"
     gene            complement(9547..11349)
                     /gene="pepF"
                     /locus_tag="VIS53_05875"
     CDS             complement(9547..11349)
                     /gene="pepF"
                     /locus_tag="VIS53_05875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEY5767344.1"
                     /translation="MFSRIPTRADIPETDKWNLAHLFADVSKWQEDFAWLQLEYPKFE
                     QWKGRVGESAETLSGLLEFEKALEQKMERVYHYASLQAAEDSTNNEYLARMGQVQNLL
                     TRISEAAAFVVPEILAIDDERFGKFVADAALKDWRIKLHKIRRMRSHVLSVPEERLLA
                     LSNVALSGYDDTFSQLTDVDMKFGALVDETGREQPLSQSSFSSFLVKRDPELRKRAFH
                     QFYAEFRDHQYTLAASLAYSVKADVFQARARHYPSALEAALFPDDVPVEVYDGLIQSV
                     RANLNPLFRYFDFRRRALGLGELHHWDTYVPLVPQIQTRFTFDEAAEMVLDALAPLGK
                     EYVQVLAEGLRSRRWCDRYENKGKRSGAFSSGSYSAPPYILMNYKQDVFADVYTLAHE
                     AGHSMHSWFSQSSQLFQDYEYPIFLAEVASTFNEELLTHHLLRTTNDPKMRAYIINRE
                     IDDLRGTLFRQTMFAEFERIIHAIEESGDALTLEVFKSEYHKLLEAYFAEDFVLDPEL
                     DLECLRIPHFYHAFYVYKYATGISAAVTLSQRVLSDQPGSVEAYLKFLRSGGSKFPLE
                     TLKAAGVDMTTPAPIESTLRLFERRLTELEALLL"
     gene            complement(11436..11978)
                     /locus_tag="VIS53_05880"
     CDS             complement(11436..11978)
                     /locus_tag="VIS53_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEY5767345.1"
                     /translation="MQSAPVSGGAILSDVMIIGQAPGPREPTLKRPFAHTAGKTLFRW
                     FEQFCGMDEAAVRSKIYFAAVCRCFPGKNSGGTDRVPAPDEIRNCALWMNDEIRILQP
                     RLVIPVGRLAIVRFIDCAKLEDVIGRKFRGVYAEHCFDLIPLPHPSGASPWHKIPPGK
                     ALTERALKLIARHPAIHLLD"
     gene            complement(12150..12371)
                     /locus_tag="VIS53_05885"
     CDS             complement(12150..12371)
                     /locus_tag="VIS53_05885"
                     /inference="COORDINATES: protein motif:HMM:NF022596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HEY5767346.1"
                     /translation="MRELGRFIVIIGVIATLVGLVMWSGFAPKWLGRLPGDIRIEREH
                     SSFYFPIVTCIVLSIVLSLLLSLFSIFRR"
     gene            12420..13379
                     /locus_tag="VIS53_05890"
     CDS             12420..13379
                     /locus_tag="VIS53_05890"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HEY5767347.1"
                     /translation="MPVQFRDYYETLGVQKTATDDEIRSAFRKLARKYHPDVAKDKKA
                     AEEKFKEINEAYEVLSDPEKRKKYDQLGADWNRPGGFQPPPQWQGQQRPGGGFYQWGG
                     DGGGGVEFEFGGTGFSDFFEAFFGGGRGRSAFGGFGGRPGTAERGADVEADIMVTLEE
                     ALHGSTRTVSLRRAGSDKVEQYQVKIPRGVREGQRIRLRGQGEAGAGGGKSGDLFLRV
                     RLAKHPDFSVEGNDLIHEERIEPWQLVLGSELLVPTVEGKVRLKVPPGTQGGQRFRLR
                     ERGLPGVSGKRGDLYVVVQINIPKKLTERERELWSELAKLHGA"
     gene            13490..13921
                     /gene="rpiB"
                     /locus_tag="VIS53_05895"
     CDS             13490..13921
                     /gene="rpiB"
                     /locus_tag="VIS53_05895"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: protein motif:HMM:NF004051.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEY5767348.1"
                     /translation="MKISLGSDHAGFRYKEKVKELLGSLGHEVKDFGTFSEEPVDYPL
                     FIRPAAEAVARGECDRGVVFGGSGNGEAMVANKVHGVRCALCWNEESAQLSRQHNDAN
                     VLSMGERLIPEDLALKIVRVWLETAFDGGRHERRVAMLNAM"
     gene            complement(13969..14823)
                     /locus_tag="VIS53_05900"
     CDS             complement(13969..14823)
                     /locus_tag="VIS53_05900"
                     /inference="COORDINATES: protein motif:HMM:TIGR01475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiA-like polyprenyltransferase"
                     /protein_id="HEY5767349.1"
                     /translation="MRLIGTGPLTRFLRLIRFSHTIFALPFALAALVVAANGWPSPRI
                     LLLVIVCMVFARTAAMLFNRVVDWSLDQRNPRTASRHLLVSKFSAVVLLILASAGFLL
                     AACAINRLTCILAPVALALTFFYSVTKRFTSATHFFLGLALAIAPVGAWIAQTGHLDI
                     APLVLAVGVICWVAAFDLIYATQDYDFDRREGIRSLVVKLGITRSLRLAQLLHLLTFV
                     ALIAFGFVAELGAIYYSSLPLIAAALVYEHKTEKRDLTGINRAFFQSNAFVSAVFLLA
                     VCVDRVIR"
     gene            complement(15033..>15994)
                     /gene="gndA"
                     /locus_tag="VIS53_05905"
     CDS             complement(15033..>15994)
                     /gene="gndA"
                     /locus_tag="VIS53_05905"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: protein motif:HMM:NF006765.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEY5767350.1"
                     /translation="GPDGAGHYVKMVHNGIEYGDIQLICEAYAILKDILGMDETQLAD
                     TFTEWNKGELESYLIEITSQIFHKIDPETGKPLVDVILDKAGQKGTGIWTLQAAINQY
                     VVISTINAAVEARVISSRKEERVAASEILPQPRARTFKGNRDRFVDGVRDALYASKII
                     SYAQGMELLRSGSTTYEWNLNLSDIATIWRGGCIIRAKFLNRIVEAYRRNPALQNLLL
                     DRYFTRAIKRAQPKWRLVVSTAIKFGIPVPAFSASLAYYDSYRSARLPANLLQAQRDF
                     FGAHTYERIDKPGVFHTEWLEAEEKPAEKPAEPKAHEPHHAGE"
BASE COUNT         3715 a         4361 c         4469 g         3449 t
ORIGIN      
        1 actctcaact ctcaactctc aactatgaac ttccgtttga gagtctggcg acagcgtgac
       61 gcgaaaatca gcggcaaact taccgattac gaagtccgcg acatctcgcc tgacacttcg
      121 tttctcgaga tgctcgatat tctgaacgaa aatctgctcc gagctggcgg ggaacctgtt
      181 gcgtttgact ctgattgcag ggaagggatt tgcggcacct gctcgcttac ggtcaacggt
      241 gaagctcacg gccccgatca tccgggcgcg gtgtgcgagc tgtacatgcg aaaatttcgg
      301 gatggtgaga ccatcaccgt cgaaccgttt cgcgtcggct cgtttccgat cgtcaaagat
      361 ttggtggtcg accgcagcgc gctcgaccgg atcgtgcaag ccggcggatt tatctccgcg
      421 cgcgcaggtt cagcgccgga ggcaaattca attctcgttc ccaaacacga cgcagacctg
      481 gcaatggaag cagcggcgtg catcggctgc ggcgcgtgcg cggcggcgtg cccgaacgga
      541 tcggcaatgc tttttgcggc tgcgaaagtt tcgcaccttt catttttgcc gcagggcacg
      601 cctgaacgcg agcgacgtgt gttgaaaatg gtgcaggtaa tggatgacca ggggtttggt
      661 aattgcacca acacttacga gtgcgaagca gtatgtcccg ccaagatcag cgccagtttc
      721 atcgccaagc tcaaccgcga atacgcgcgc gcacaattct gccaacggct cggcgaatag
      781 gcggcgctgg aaactgtagg ggaagctgac agcttcccct cgggacgaca acgtcgtcac
      841 ctacagcgta cgcgtgacac acgtccaaag ttccggatcg agctcggctt ttgcgcgctt
      901 cgccagagaa tcggcgtccg cattcgaccg cagcactgca aaagctgtgg accccgaacc
      961 ggacatcagc gcggcgccga cttctggttg cttgagcaac cacattttca gttgcgctag
     1021 aaaaacaaat ttttcgaaaa cagggcgctc cagatcattc acgacacttt gttgcgtgag
     1081 ctgttggact ccgtacgaaa ctccgggaat ttcgcgcgag tctcgccagc gagagtacgc
     1141 ccactgcgta ggcacgccaa actcaggctt cagcaacaac accgataatt cttcacgcaa
     1201 tctggtcggg ctcaccagtt cgccccgccc tttgcacacc gcggcggatt gaaaaatgaa
     1261 aaatggaacg tccgatccga tcatctccgc cattttcgcc agcacttcac ggggcaaatt
     1321 tgtttcgaac agtttgttga gcgccagcag agtggaagcg gcgtcgctgc ttccaccacc
     1381 gagaccggcg ccgtgcggaa ttcttttttt taactcgatc gaaagcccgc cggtgatctt
     1441 cgcttcttcg aaaaaaatgt tcgcggcacg caccacaata ttgtcttcgc ctttcggcac
     1501 cgacggatca tcgcagcgaa acgcgatttc ttgtttccca gggcgctgct caatcttgat
     1561 ctcgtcgcaa agcgaaatcg gcgcgatgaa cgtctcgatt tcgtgaaagc catcgctgcg
     1621 atggccgaga actctcagcg aaagattgat cttcgcggga gcgatgactt gcataacctg
     1681 caatttgctc tgtcattccg agcgaagtcg aggaatctct tgttcggagt gacaaccgtt
     1741 gctgacaaaa tcatcgtggc gctggacgtc gccacaaagg agagggcgct cgcgctggtt
     1801 gagcagctcg ggggcgagat ctcgtttttc aaaatcggtc tccaacttta cacggccgaa
     1861 ggccccgaaa ttgtgcgtgc agttttggcc actgacgcga aggtctggct cgatctgaag
     1921 ctctacgaca tccccaatac cgtcgcgcga gccgttgagt ctgcgagcac tcttggagtg
     1981 cagatgctca cgattcactt gagcggcggc agcgaaatga ttcgcgccgc gactgccgct
     2041 cgcgccagcg atatgctcct cctgggggtg actgttctaa ccagcgccac cgaacaaacg
     2101 ttgcgcgaaa ttggaatcac agacgatgtc gaggatcaag tactccgtct ggccaaatta
     2161 ggcgcagaag caggaatcga tggcgtcgtg gccagtccac atgaaatcag acatcttcgc
     2221 cgcgagctgg gcgacagaat caaaatcgcc gtccagggaa ttcggccaac ctgggcagat
     2281 ccgggcgatc agaaacggtt tatgactccg cgcgaagcaa tccaagcggg cgcagactac
     2341 atcggtatcg gacggcccat caccgggcat gcgcagccgc gcgaagccgt gaaaatgatt
     2401 ttggacgagc ttcacagcta gttctcatgc cgagcgaagt cgagacagcc tctgcagcta
     2461 tccaccgcac tgccgcgatt cttccatttc gctttgctcc gctcggaatg acagagcagt
     2521 tgtttgccag actggacatt tgttatgacg tcgccacgca ttcggcggcg atgaacatgg
     2581 cgatcgatga gaccctgctg gaaacggcag tgggtccaac tattcgcttt tatcgctggc
     2641 gttcccctgc cctgtcgttc ggatattttg ggaagttcgc cgatgtggcg acgtacgtgg
     2701 aggcgcgcga cttggttcgg cgttggactg gcggcggaat cgtttttcac ggagacgacc
     2761 tcacctactc gattgtgatt ccggcgagcg atccggtgtt taatgaatca tcaatcgcta
     2821 tctacgaaaa aattcatcgc gcgttgtgcc gtgcgctggc tggccacaat cagggcgcag
     2881 agctaaatgt agccacgctt gacaaccggc ggactggaga ccgccactcc ttgcacaatg
     2941 actgcttcgg gaatccggtg cgcgccgacg tgatgatgaa cggtcgcaag atcgctgggg
     3001 ctgcgcaacg acgtacccat cgcggtttgc tgcagcaagg cagcattcaa ggcttcacta
     3061 tgaattgtga ccttgcctca aaatttgctc aggcgctgtc gctcaattgc aatgatttcg
     3121 aggtcagtga acgaattttc cagcgtgcgc aagaaatagc tcagcagaaa tacggaactg
     3181 aatcctggct gcgcaagcgt tgaaaactgt agggcgtctg tgtcagacgc ctcacctggt
     3241 ttcggaattt caccacaata ttcgtgcagg gtcggtgtta tgttgctttg acaacctcca
     3301 acccgcgcca ctatcctcgc ctcgtggaac tcttcgcccg cacggaccgg agcacgagtc
     3361 gccgcgcagt cgcgaagacg ggcggtcctc ccgcgcatcg tttagctgaa gttgcaaaat
     3421 tagttcaacc gcagcttgag gaagtcgaga agcgcatcgc gcaacaggcc gcggcattcg
     3481 atcccgcaat tgaaggttat gtcgtttacg cgctcggcag ccgtgggaaa cgtcttcgac
     3541 cgctgctggc tctgcttgca ggcggcgcca ccggaaagat ccattccgga catatcgatc
     3601 tcgccgtgat cgtagagctc attcatctcg cgacgctggt gcatgacgac gtgatggacg
     3661 aagcagaaca gcgtcgagca aagccaaccg caaatgcgcg ctggggaaat tcgctgagcg
     3721 ttctactagg cgactgtctt ttcgcgcacg cgctgacgtt atccacagat ttcgaaaact
     3781 ccgatatcgg tcgcgcaatc gcgcgcacgg cgaccacggt ttgctcaggc gaaatgattc
     3841 aaacgcagcg caggttcgat cttaacctga ccgttgaaga ttatttgcgg atcgtgcaga
     3901 tgaaaaccgg atcacttttc tccgccgccg cggaactggc cgccgctatc agagaggccg
     3961 atccgaaaat gatcgcaaca ttcaagaact ttggattcca aatcgggacg gcctatcaga
     4021 tttatgatga ttgtgtggat ctcgccggca ccgagagtat gactggtaaa acgctcggga
     4081 cggacctgcg caaaggaaaa ttcacgttgc cggttttgat tttcctccgt tccgcttcgg
     4141 agtttgaacg cgaacgttgt tgccagcttg tgctggacga aaaggtcgaa gaaatgattg
     4201 agctcctcaa gaacggcgcg aacaacggcg cgttaaacga gtcaatcgcg gcgggcagcg
     4261 atctgattcg caaagcgcaa tgcgcattcg atggtatcgc gccgaatcga tacaccgacg
     4321 cattattttc gctcggtgac gctttgtgcg acatgttcga tcaacttcgc gcgtgatgaa
     4381 atgtgggagg gaccttggag tcccgacttc cggccgcctt ccatcgcagc gttgaggctg
     4441 ctcccactct catatgccgc agcttaaaat ccgcgaaatg ccgcaggacg agcggccgcg
     4501 cgaaaagttg cttgcacgag gggcggacgt tctcagcaac gcagaattga tcgcaatatt
     4561 gctgcgcacc ggccggcgcg gcatgaacgt ggtagatgtc gctcgtgagt tgctcgacaa
     4621 atacaaatcg ttcgcggagc tgagccggtg ctccgtcaag gaactcagcg aaatcaaagg
     4681 gatcggtccg gcgaaggcat tagaactggt ggcagcgttc aatttgggaa aacgtttcac
     4741 gcaggaatca ttaacccagc aaaaactcga ttcaccggaa ctgatttaca aactgctggg
     4801 agacgaaatg cggatgctgc ggaccgaatc actgcgagtt gtcctgctcg acacgcgtta
     4861 ccgtttgatg cgaaccgaat caatttcggt aggaagcatg aatgagagca tcgcgcatcc
     4921 acgggagatt tttcgacccg caatcactta ctcagcctac gcggtcatcg ttgtgcacaa
     4981 tcatccgtcc ggcgatccgt cgccgagcca gactgaccac agcctcacgc gacgtctggc
     5041 cgaagcggcc gagcttttgc aaatcaaatt gctcgatcac atcgtcatcg gtgcgccatc
     5101 gggcaccagt tctggttatt tcagtttcaa agaggcaggc gtgttgtagg cagggaaatc
     5161 cgaaattcga atgtcgaaat ccgaaacatg acggataaga aggttcatcc gaccgcgatc
     5221 gtcgatccga atgcgaagat cggcgctgat gtgcagatcg ggccattctc aatcgttggg
     5281 ccagatgtga caattggcga gcaaaccatt gtgcaatcgc acgtggtgat cgaagacgag
     5341 gtcgcgatcg gccgcggaaa tttcatcgga cacggcgcga tcatcggtgt gctaccgcag
     5401 gatatttcgt tttcgccgga acgaaagacg aaggtcgaaa tcggggacga caatattatt
     5461 cgggagtact gtacgatcca ccgtggcagc cccgacggga gcgtcacgaa aattggcgac
     5521 aagaattttc taatgagcgg agcgcacatc ggccacaatt gcctaatcgg agacaatgtt
     5581 gttatcgcca acaattgttt gctggccggg catgtgcgcg ttgacgacgg cgcgtttctc
     5641 gggggcggat caacgtttca ccagttcatg cacatcggac gattggtaat ggtgcagggc
     5701 agctccggat ttgggaaaga tctgcctccg ttcgtgatcg cggccgaacg gaattccgtc
     5761 ttcgggctca acatcgtcgg aatgtgccgc gctggactca gcgcaaacga ccgatccgaa
     5821 atcaaggagg cattcaaact tgtctaccta agtggactaa acacgtcgca ggctctcgag
     5881 aaagcggaga cgatgacgtt tggcgcacca gcacgcgaat tcctaaactt cgttgccagt
     5941 gcaaagaagc gtgggatttg cccgctgaaa cgtggcgcag gcgactacgt ttcggtctag
     6001 agacaaaagc agaatcgccc cggtcggatg ctcaaccgcc ttgcaccggc ggcatgatcg
     6061 cgatttcgtc ccctgaattc agcttgtaat tgcgatcgac aaattccagg tctgcaccaa
     6121 ccaggatact tttgtcatag gcacggagcg cagatttttg cgcataaatc ttttcgagca
     6181 attcgcgaac cgtcgcgcct tgcggaagtt caagctctag ctcgtgaact ccaatgagtt
     6241 cacgcagctg cgcataaaat tgcactcgca cgttcattgt ttcggttgcc ccagcaaacc
     6301 gtttctgagc acgccgatat acggcaggtt gcgataccgc tccatgaagt cgagcccata
     6361 accgacaaca aattcatcat cgatttcaaa gccgatgtaa tccgcatcaa cgtcccgcgc
     6421 acgctctttc cttttgctca gcagcacaca gacccgaatg ctgcgtggtt tggccgtttc
     6481 cagctttttg cgaacggccg ccagcgtatg gccggtatcg agaatatcat ccagaatcaa
     6541 gacatctcgg tcggtaacgt cgggaagaga aacgtgtttg aaaatcacct gcccgctcgt
     6601 ttgcgttttg ccgtggtaac tgaccacgct cagacaatcc aatttcaagg gaagtggaat
     6661 tcggcgcagc agatctgaca tgaacatcag gctgccggtt agaattgcga tcaccgtcag
     6721 ctcgcggtcg gagtaatcgg ccgtgatttg cgcagccatt tctctgatcc gtttgtgaat
     6781 tgccggcccg tcaaacagca cgcgctcgat atccccttgc atctgaaggt cgcgcatgct
     6841 tctcgcttgc gcattcccag agtacgcaag cgagacgcac gcgctactcc ttacccgcgt
     6901 ccccaagccc tcgctccttg cctgcccgcc gtagccttgc gcgaaggcgg gttttgccct
     6961 gcccgtcacg ctgattaaca tgcttgaaaa tgcacgtcta ccacgaccaa ctcgaagtgc
     7021 gcacgcatga caaggaactc tacgaaatca ctgatgacgt gcagtcaaaa atcgacaaga
     7081 gcggagtgca aaacggaaca gtcacggttt tcgttcagca taccagttgc agcatcgtcg
     7141 tcatggaaaa tgccgatccc accgcgcggc gcgatttgga agagttcttc gagcgtcttg
     7201 tgcctgaaga ttccgattac ttcacgcacc atgcggaagg cagcgacgac atgccatcac
     7261 atatccgcat ggtcctgacg cgcaccagcg agaccgtgcc gattgtggac ggcaaaatgc
     7321 agctcggaac gtggcaaggt atcttcttgt tcgaacatcg ccgcgcgccc catcgccgaa
     7381 aacttttgat caccatgatc ggcgaatgac tgtagcggcg gtcttatgac gatcgcggcg
     7441 cccaacgacg tagcgacgcc gcgctgcctc gaaaagcttt tgggagacag cgcggcgctt
     7501 catttctgcc gcctgccgtg actcatgagt cacggtttaa tggtgatttt ggcggacata
     7561 gctgctacgg aaggacctag tgtgtatccc aacccaggtt cgagcgttac gacaacgctg
     7621 tacccttgac ggtaggatga tcctctggga tcaagcaagg ttttgaccag gattactccg
     7681 tagccgtcgg gtccgatata ggccggggag acaagcgtca cgtaatcaac tcctgggata
     7741 gcggtgccgc taacagagaa gtttacgtaa gggtagtacg ggaagtaacc cctgttgggc
     7801 gcctgctggc tcatgtcgag gacgaatgaa ccggtctttc cccggctaac gtcgccggtg
     7861 ctatggatag aaacaaccgg gagttgcaca ggaggaattg ccggactttc gccgcgcacc
     7921 tgagcgatcg cgctcgcaag cacgaatacc aagcccaggc taagaggcat tttgctaatc
     7981 atttttggtt tcatattatt tattttcttt cttgtttggc tttctttgat ttctcgtcat
     8041 tgagaactca tttctggccg ttcactgagg tagtgcgtag aaatcggcgc gaggttacgc
     8101 ggaagtttcc gagtaaactt gtgaaccgcg gatgggcgga ttgtaactga ttggggagcg
     8161 gtcgacgcgg cgaccccgcc tactggtttc ggctcctggc cgaaacgaac ttaagacaat
     8221 ccgatggcta cagctccgat cgggtcctca cgggttgcgc ccggactgca gtatcaagtt
     8281 ccgatgctca tcctcgatgt cgccggagac gccttccact cagcgaaatc gaatggatca
     8341 ttgctcttag ccataaatgg catcgaccag acgcaacgat ttttcggtag gcagaaccga
     8401 ttgttccatt tgattcatca cgtacgcgaa tgcgatcttg ttttccgaat cggcaaaagc
     8461 gtggctgccg ccggcgccgg gatgtccaaa ggatgttgcg gataatccga acattctgcg
     8521 cgctgcgtct cgtgagtctt tcataaaccc ggccgagaat gcggttggaa tttgaaaaac
     8581 gcggtcgata ccatctgata acgtcgttgt catcggttcg atcgtttttg gtgaaaaaaa
     8641 agtctgccca ttaaattttc caccgttggc gagtatagaa tagaatttcg caagcgccca
     8701 cgcgctcccg attcctccga acgaaacatt gggctgcacc cggatgtgcg gatcgttcat
     8761 cttgctgatg acatttaatc cataaggcga cgtaaacgtc tttctggcca acgtaccggg
     8821 cgtaacaaga tcgcgataga attgtgctgg ctctggtggc ttcccactct ttgcagcgta
     8881 aatcgtggcc actcgcgaat tctccttttc cggcaagccg atccagaaat cgagttcgag
     8941 cggcctggca aaactttcct gccaataatc cgacagtgtt tttccagtta cgcgccgcat
     9001 tagttcgtcg agaagaaatc caaacgtgcg cgcgtgatag ccatgcgcag tgcccggcgg
     9061 ccacaaaggc aattgcgctt ccagcgcccg aatcactccg tggtaatcga gcacgtcaac
     9121 gcgctgatcc aaaacacaaa gtccagcctg atgcgaaagc aattgcccga gcgtgatctt
     9181 gtctttgtct gcctgcccaa actcgggcca gaactcagcg acgggccggt ggagctcaat
     9241 cttccgttgt tgcaacgcat gcaacacaca cgcgctgcca attcctttcg ttgcagacca
     9301 gaccagcacg actgtgtcgg ccgtccacgg tttctcgcga cccgcgtcgc aaaatccgcc
     9361 gtaaagatca atcagcggtt taccgttttg ccaaactgaa accgccgcgc cgagttcgcc
     9421 gaacagttcg aagttctcct gaaacaaggg ctcgagtcgc gggcgaagtt tttcggcatc
     9481 gaggtgcatg atcgaaaggc taaaacagga gcgagacgcc gctttggaaa gacgcggctc
     9541 gttgatttac aacaaaagcg cttctaattc ggtgagccgg cgttcgaata ggcgcaacgt
     9601 gctctcaatc ggggcggggg tcgtcatgtc cacgccggcc gcttttaatg tctcgagcgg
     9661 gaatttggag ccgcctgaac gcaagaactt cagatacgcc tcgacacttc ccggctggtc
     9721 ggaaagcacg cgctgcgata gcgtcacagc agcagagatt ccggtcgcgt atttgtagac
     9781 gtagaacgca tgatagaaat gcgggatgcg gaggcattcc agatcaagct cgggatcgag
     9841 cacgaaatct tcagcaaaat aagcttcgag cagcttgtga tattccgatt tgaaaacttc
     9901 gagtgtcagc gcatcgccgc tttcctcgat ggcgtgaata attctttcga attcggcaaa
     9961 catggtctgt cgaaacaggg tgccacgcag atcatcgatt tcgcggttga tgatgtaagc
    10021 ccgcatcttc ggatcgttcg tagtccgaag cagatgatgc gtcagcaatt cctcgttgaa
    10081 cgtcgatgca acctccgcga gaaaaatcgg atactcgtag tcttgaaaaa gctgcgaact
    10141 ttgcgagaac cagctgtgca ttgaatgccc tgcctcgtgc gcaagcgtgt acacatcggc
    10201 gaacacgtcc tgcttgtagt tcatgagaat gtatggcggc gcgctgtaac tgccggatga
    10261 aaaagcaccg ctgcgtttgc ctttgttttc gtaacgatca caccagcgtc gcgagcgcag
    10321 accttccgcc agcacctgga cgtattcctt tcccagcgga gcgagcgcgt ccaacaccat
    10381 ttcggccgct tcatcgaatg taaatctggt ctggatctgc ggaacgagcg gaacgtacgt
    10441 gtcccagtga tgcagttcgc ccaagccaag ggcgcgccga cgaaaatcga aatatcgaaa
    10501 cagcggattc agatttgcgc ggacagattg aatcaagcca tcatacacct cgaccggcac
    10561 atcatccgga aacagcgccg cttcgagcgc agatggataa tgccgtgccc tggcctgaaa
    10621 cacgtctgcc ttcaccgaat aggccagaga cgcggcgagc gtgtactgat ggtcgcgaaa
    10681 ctcagcgtag aattgatgga aagcgcgttt gcgcaattca gggtcgcgct tcaccagaaa
    10741 tgagctgaac gagctttggc tgaggggttg ctcgcgtccg gtctcgtcga cgagcgcgcc
    10801 gaatttcatg tctacatcgg tgagctggga aaatgtgtcg tcgtaaccgc tcagcgcgac
    10861 attgctcagc gcgagcagac gttcctcggg cactgaaagc acatgcgatc gcattcgtcg
    10921 gattttgtgc agcttgatcc gccaatcttt caacgcagcg tcggcaacga attttccgaa
    10981 tcgttcatca tcgatcgcca aaatttccgg gacaacaaac gccgccgcct cgctgatcct
    11041 tgtaagtaga ttctggacct gacccatgcg agcgaggtac tcgttattcg tgctgtcctc
    11101 ggccgcttgc agcgacgcgt agtgatagac gcgttccatc ttctgctcga gcgctttctc
    11161 gaactcgaga agcccgctca acgtctcggc tgattccccc actctgcctt tccactgttc
    11221 aaacttcgga tactcaagct gtagccaggc aaagtcctcc tgccatttgc tcacgtcagc
    11281 gaacaaatgc gccaggttcc atttgtcagt ctcgggaatg tcagcacggg ttggaattcg
    11341 agaaaacatt cggaaaaaga tgaatcagga aaccaggaaa ccaagaaaag agtaaataac
    11401 tctccattga aaattcatgg gttttggctt ccagattaat ccaatagatg gattgcagga
    11461 tgtcgcgcga ttaatttgag ggcgcgctcg gtgagtgctt tgccgggtgg gattttgtgc
    11521 cagggcgatg cgccggaggg atgcggcaag ggaatcaagt cgaagcagtg ttccgcgtac
    11581 acgccgcgaa atttgcggcc aattacatct tccaattttg cgcagtcaat gaaacgcacg
    11641 atcgccagcc ggccgaccgg aataacgaga cgcggctgca aaatccgaat ctcatcattc
    11701 atccacaagg cacagttgcg aatctcgtct ggcgccggca cgcggtcggt accgccggaa
    11761 tttttgccgg ggaaacagcg gcagacggcg gcgaaataga tcttcgatcg aacggcggct
    11821 tcgtccattc cgcaaaattg ttcgaaccaa cgaaagagtg ttttcccggc agtgtgcgca
    11881 aacggtcgtt tcaacgtcgg ttcccgcgga ccaggggcct gtccaatgat catcacatcg
    11941 ctcaagatcg cgccgccgga caccggcgcc gattgcatgc gcgggcagcg gcgacagcga
    12001 agaagcgccc ttacatgttt gtcgagtcgg ttttggatag ttgctgtagc cacggccctg
    12061 tgggccgttc gcacatggct ggacaactcg caagatcaga gaggccacag cccgtggcta
    12121 cagcgttcaa agccgcaact ttgaaaattt cagcgccgga agatcgagaa aagcgacaga
    12181 agcaaactca ggacaatgct caaaacgatg caggtaacga tgggaaagta gaacgaggaa
    12241 tgttcgcgct cgatccgaat gtcgccgggc agtcggccga gccacttcgg cgcgaaacca
    12301 ctccacatga ctagacccac gagcgtagcg atcacgccga tgattacgat aaaccttccc
    12361 agttcgcgca ccgttcaaaa agttgcgcga atgaagcgga ggcacaagct tgggaataga
    12421 tgccagtcca atttcgagat tattacgaga cgctcggggt acagaaaacg gcgaccgacg
    12481 atgagattcg cagcgctttt cgaaagctgg cgcgcaagta tcacccggac gtggccaagg
    12541 acaaaaaggc ggccgaagaa aaatttaagg aaatcaacga agcctacgaa gttctgagcg
    12601 atcctgaaaa gcggaagaaa tacgatcagc tcggcgcgga ttggaatcgg cccggcggtt
    12661 ttcagccacc gcctcagtgg caaggccagc agcggccagg cggcggattt tatcaatggg
    12721 gcggcgacgg cggcggcgga gttgagttcg agttcggcgg aactgggttc agcgatttct
    12781 tcgaagcgtt ttttggcggc gggcgcggtc gctccgcatt cggcgggttc ggcggacgcc
    12841 ctgggacagc cgaacgcggc gccgacgtgg aagcggatat tatggtcaca ctcgaggaag
    12901 cgctccacgg ttccacaagg accgtgtcgc tgcggcgagc tggttcagac aaggtggagc
    12961 agtatcaagt caagattcct cgcggcgtcc gcgaaggcca gcggatccgt ttgcgtggtc
    13021 agggtgaagc cggcgcgggt ggaggaaaaa gtggcgacct ttttcttcgg gtgcgattgg
    13081 ccaaacatcc ggatttttca gtcgagggca acgacttgat tcacgaagag agaattgagc
    13141 cgtggcagct agtgctgggc agcgaattgc tcgtgcccac tgtcgaagga aaagtgcgac
    13201 tgaaagttcc gccaggcacc caaggtggac agcgttttcg tttgcgcgag cgcggcctgc
    13261 ctggagtctc agggaaacgc ggcgatctgt acgttgtcgt tcagatcaac atcccgaaga
    13321 agctaacgga acgcgaacgc gaactctgga gcgaattggc gaaattgcac ggagcgtaag
    13381 aatttgtcat gtcgagcgca gtcgagacat ctctgattat tgtcttttcc gcgataggtg
    13441 gccgatcaac aattagagat tcctcgactt cgctcggaat gacagaccta tgaaaatttc
    13501 gctgggctca gatcacgccg gttttcgtta caaggagaag gtaaaagaat tgctcggctc
    13561 gctcggacat gaagtgaagg acttcggcac gtttagcgag gaaccggtgg attatccgct
    13621 tttcattcgt ccggcggcgg aagcagtagc gcgcggcgag tgcgatcgcg gcgttgtctt
    13681 cggtggttca ggcaatggcg aagcgatggt ggcgaacaaa gtgcacggcg tgcgttgcgc
    13741 gctttgctgg aacgaagagt cggcccaact ctcgcggcaa cacaatgatg cgaatgtcct
    13801 ctcgatgggc gaacgtctga ttcccgaaga cctggcgcta aaaatcgtgc gggtttggct
    13861 tgagactgct ttcgatggcg gccggcacga acgacgcgtc gcgatgttaa acgcgatgta
    13921 ggtaggggcg gttcgccgaa cctcccgggc tattgaggtc aatcgcccct acctgattac
    13981 tcggtctacg cacaccgcga gcaggaacac cgcgctcaca aacgcgttgc tttggaaaaa
    14041 cgcgcgattg attcctgtca gatcgcgttt ttcggttttg tgttcgtaaa caagcgccgc
    14101 tgcgatcaaa ggcagtgatg agtagtagat cgcgccgagc tccgcgacga atccaaaagc
    14161 gatgagtgcc acaaacgtta gcagatgtaa tagctgcgcg agacgcaaac tgcgcgtgat
    14221 ccccagtttc accaccagcg atcgaatccc ttcgcgccga tcaaaatcat agtcctgcgt
    14281 ggcatagatc agatcgaatg ctgccaccca gcaaattacg ccgaccgcaa gcaccagcgg
    14341 cgcaatatca agatgtccgg tctgggcgat ccaagcgccg actggagcaa tggcaagtgc
    14401 cagcccgaga aaaaaatgcg ttgcgctggt gaaccgcttc gtcaccgaat aaaaaaaagt
    14461 caacgcaagc gcgacgggcg cgaggatgca ggtcagccga ttaattgcgc aggcggccag
    14521 cagaaacccg gcagaagcga gaatcagtaa aaccacagcc gagaattttg atacgagtaa
    14581 gtgtcgcgaa gccgtgcgcg gattgcgttg atcaagcgac cagtcaacga cccggttgaa
    14641 aagcatagct gcggtgcgcg cgaataccat gcagacgatc accagcaaaa gaattctcgg
    14701 cgatggccag ccgttcgccg ccacgaccag cgctgcaagt gcaaagggaa gcgcgaaaat
    14761 cgtatgagaa aaacgaatca accgaagaaa tcgggtgagt ggtccggtcc caattagtct
    14821 cataattttc gcagcgagtt ttagttccga aggacacgcg cttccagcct gtagttactg
    14881 gcgacgctgt tcaaagcatc ttcgcgccac gaattctgaa gtccgcacca aattccccgg
    14941 cctcggcaag ctgccgacgc ctgcacgctg gcagcctgcg ctccccagaa agcgcgattc
    15001 gcgcaaccga tcgcgtgccg gccaaagaat gcttattcgc ccgcgtgatg cggctcgtgt
    15061 gctttcggtt ctgccggctt ttcggcgggc ttttcctcag cctccagcca ttcggtgtgg
    15121 aagacgccgg gcttgtcaat gcgctcgtag gtgtgcgcac caaagaaatc gcgttgcgct
    15181 tgcaggagat tcgcaggcag gcgagcggag cgataactgt cgtaataggc caacgacgca
    15241 gaaaacgcgg ggaccggtat gccgaacttg atagctgtgg aaacgacgag gcgccatttc
    15301 ggctgcgctc ttttgatggc cctggtgaaa tagcggtcga ggagaagatt ttgtagcgca
    15361 ggattacgcc gatatgcctc aacgattcga tttagaaact tggcgcgaat gatacagccg
    15421 ccccgccaga tcgtagcgat gtcgctcagg ttcaagttcc attcgtaggt cgtgcttccg
    15481 gagcgaagaa gttccattcc ctgcgcgtac gaaataattt ttgacgcata gagcgcgtca
    15541 cgcacgccgt cgacgaaacg atcgcgattg cctttgaacg ttcgagctcg cggctgcggc
    15601 agaatttccg acgccgcaac acgttcttct tttcgcgatg aaatcacccg ggcttcgact
    15661 gcggcgttga tcgttgaaat gacgacgtat tgattgatgg cagcttgcag tgtccagatg
    15721 ccggttcctt tttggcccgc tttgtcgagg atgacatcca ccagcggctt gcctgtttcg
    15781 gggtcaatct tgtgaaaaat ctgcgatgtg atttcgatca aataactctc gagctcgcct
    15841 ttgttccact ctgtaaaagt gtctgcgagt tgcgtctcat ccattcccaa aatgtccttg
    15901 agaatagcgt acgcttcaca gatcagttgg atatcgccgt actcaatacc gttgtgcacc
    15961 atcttcacgt aatgaccggc gccgtcgggt ccca
//
LOCUS       DATDAJ010000237         5128 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1338240, whole genome shotgun sequence.
ACCESSION   DATDAJ010000237 DATDAJ010000000
VERSION     DATDAJ010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338240"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="VIS53_05910"
     CDS             <1..1005
                     /locus_tag="VIS53_05910"
                     /inference="COORDINATES: protein motif:HMM:NF014027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEY5767351.1"
                     /translation="DSPHCEVANVKMGSISEFIERHFRHFNAAVLTDAADAYIAHLGR
                     GGKMMITLAGAMSTAELGVSLAEMIRRDKVHAITCTGANMEEDLFNLVARSKYERIPN
                     YRELSPQQEQELLERHLNRVTDTCIPEEEAMRRIERVVLDEWAAASQNNQRKFPHEFL
                     YQILRECRLKQFYEIDPADSWMVAVAHNDLPLFVPGWEDSTLGNIYAARCITGAISNV
                     QAVRSGIEYMIELAAWYRRVSKDSSIGFFQIGGGIAGDFPICVVPMLNQDVVSMPVPE
                     WAYFCQISDSTTSFGSYSGAVPNEKITWGKLNVDTPRFVIESDATIVAPLVFAKVLGW
                     "
     gene            complement(1037..1387)
                     /locus_tag="VIS53_05915"
     CDS             complement(1037..1387)
                     /locus_tag="VIS53_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="YXWGXW repeat-containing protein"
                     /protein_id="HEY5767352.1"
                     /translation="MKTSSYLSMLTLVILVGCAAEPTAVTTTTTTQQVTTAGPAGEVV
                     VTRAPPAVRVETQTVAPGSGYVWTAGYWRWTGTTYAWVPGTWIVRPRPAAVWVAGHWV
                     PRYNGWVWVPGHWQ"
     gene            1494..2156
                     /gene="rsmI"
                     /locus_tag="VIS53_05920"
     CDS             1494..2156
                     /gene="rsmI"
                     /locus_tag="VIS53_05920"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEY5767353.1"
                     /translation="MLYVVATPVGNLGDITLRALEILKGVDVVAAEDTRHSGLLLKHF
                     EIKKPFVSYHEHNEAARTAELVERLGRGENVALITDAGTPGLSDPGLRLIRECISREL
                     PFTIIPGPSAILIALLGSGFSTEKFSFCGFLPVKSGRRERELRIAAEREETTLFFESP
                     YRLLKTLHACSTIIPDRQLCIARELTKKFEEFRRGTAAELLAHYEAHPAKGEIVIVVS
                     GA"
     gene            2456..3682
                     /locus_tag="VIS53_05925"
     CDS             2456..3682
                     /locus_tag="VIS53_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767354.1"
                     /translation="MTRLPRYLRPLLAGCAVTLLQVVMAVALLAPEKPIPERYSALVQ
                     HDSYWFMNIIDRGYQTIVPPIDHKMMEVSNVAFFPAYPAIAALLRNAFNISTGTALLI
                     TAQLAAWGFWTYFFLFCGRWKVAASLQICGTLLILANPAAFFLVAAYSESLFLMALLG
                     FIYWSTAEGRAARVLAAMHGMVMSATRIVGIACAAFPLVRSAFQTGWRGLLKPRKWLR
                     ENRAAVGLTFVAACGGIAFFVLCQLRWGHWDLYMLTQAAGWGIVPDYLAVVRPESYRW
                     LVPALNNPTEMSQLSMTLGAMLFVAIAVCELVPAIRRRAELPARAGIYFCAATIYYLS
                     VSGVACVGMESMLRYEFTAYALIVLALLNFLRQFRTPPIWVRVFGTAAVALLSAAGLC
                     MQGWYVWNFTRGHWVA"
     gene            3689..>5128
                     /locus_tag="VIS53_05930"
     CDS             3689..>5128
                     /locus_tag="VIS53_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5767355.1"
                     /translation="MKPKVVIIGAGPAGLTAGYLLSKNDVDVLVLEADPVYVGGISRT
                     ATYKGFHFDIGGHRFFSKSKTVEDLWTEILPNDMLTRPRSSRIFYGGKFFSYPLKPIE
                     ALLKLGVFKSILCVLSWLKARLFPVRNPRNFEEWVSNQFGKRLFNTFFKSYTEKVWGM
                     SCKEISADWAAQRIKGLSLGSAIKNALVPQRYNGDRSKVIKTLINSFRYPRRGPGMMW
                     EACAEKMTALGGKLEMDCRVTRCSYDDLSGQWNVEYKSGNGDRQIIETEHVISSAPMR
                     ELVCGLSPAVSERTKRAAESLKYRDFLTVMLILKDCERFDDNWIYIHDPSVKVGRVQN
                     FRSWSPEMVPEADKVCYGLEYFCFEHDGLWDSGDKDLIELARRELIQIGLAKEGDFVD
                     GCVVRQKKAYPVYDDDYARHVATIRQELDTRYPNLHLVGRNGMHKYNNQDHAMMTAML
                     CVENILADAKLYDLWQVNSDAEYHEAGPAA"
BASE COUNT         1075 a         1358 c         1481 g         1214 t
ORIGIN      
        1 gatagtcccc attgcgaagt tgctaatgta aagatgggca gcatcagcga gttcattgag
       61 cgccacttcc ggcatttcaa cgcggcggtg ctgacagacg cagccgacgc ttacattgcg
      121 catctcggtc gtggcggaaa gatgatgatc acgctggcgg gcgcaatgag caccgccgaa
      181 ctgggcgtgt cgctcgcaga aatgatccgc cgcgacaaag tgcacgccat tacctgcacc
      241 ggtgcgaaca tggaggaaga tctcttcaat ctcgtcgcgc gcagcaaata cgaacgaatt
      301 cctaactatc gcgagctaag tccgcaacaa gagcaggagc tcctggagcg gcacttgaat
      361 cgggtcactg acacttgcat accggaagag gaagcgatgc gacggatcga gcgggtcgtg
      421 cttgatgagt gggcggccgc ttcgcaaaac aatcagagaa agtttcccca tgagttcctt
      481 taccaaatct tgcgcgagtg ccgtctcaaa caattttatg agatcgatcc agccgatagt
      541 tggatggtcg ccgtcgcgca caatgacctt ccgttgtttg tgccgggttg ggaagattcg
      601 accttgggaa atatttacgc ggcgcgctgc atcactgggg cgatcagcaa tgtgcaggcg
      661 gtccgctcgg gcatcgaata catgatcgaa ctcgcggcgt ggtatcgccg ggtatcaaag
      721 gattcatcca tcggcttctt ccaaattggc ggaggcatcg ccggcgattt cccgatctgc
      781 gtcgtgccca tgttgaatca ggacgtggtc agcatgcccg tgcccgagtg ggcatatttt
      841 tgccaaatca gcgattccac caccagtttc ggctcatact ccggggcggt gccgaatgaa
      901 aagatcacgt ggggaaaact gaacgtcgat actcctcggt tcgtgatcga atctgacgcg
      961 acaatcgttg cgccgttggt tttcgcgaag gttttaggct ggtgacctag ctcacgtaca
     1021 attgcgttag gcgcgcctat tgccagtggc cggggaccca cacccagccg ttgtaacgag
     1081 gcacccagtg gcctgcgacc caaactgcgg cgggccgggg gcgcactatc cacgtgcccg
     1141 gcacccacgc gtaggtcgtg ccggtccatc gccagtagcc ggctgtccaa acgtagcccg
     1201 atccgggtgc caccgtctga gtttccacac gaaccgccgg cggcgcacgg gtgactacaa
     1261 cttcgcccgc cgggcccgcc gttgtcacct gttgcgtggt ggttgtcgtc gtgactgcgg
     1321 ttggttctgc cgcgcaaccg actaaaatca caagcgttag catagataag taggagctcg
     1381 ttttcatgtt tcctccgttt aaggattcgt tttgcaatag cccttcggct ttgttaagcg
     1441 gttgaaccgt ttcgtggtta gcgtgacacc gaatttgatc cgatgatacg tgcatgcttt
     1501 acgtggtggc gacgccggtc ggtaatctgg gcgatatcac tttgcgggcc cttgagatcc
     1561 tgaagggtgt tgacgttgtg gcggcggaag acacgcggca ttccggctta ctgctaaaac
     1621 atttcgagat caaaaagcct tttgtcagct accacgaaca taatgaagcc gcgcgcacgg
     1681 ctgagttggt cgagcgcctt ggtcgaggcg aaaatgttgc gttgattaca gacgctggca
     1741 cgcctggtct ttccgatcca gggttgcgtc tcattcgcga atgcatcagt cgcgaattgc
     1801 cgtttacaat tatccccgga ccatcggcga ttctgatcgc tctgctcggt tccggatttt
     1861 cgaccgagaa attctcgttc tgtggattcc tgccggtgaa aagcggccga cgcgagcgcg
     1921 aattgcggat cgcagctgaa cgcgaggaga cgacgctatt ttttgaatct ccttaccgcc
     1981 ttcttaaaac gcttcacgcc tgcagtacca tcatcccgga ccggcagctg tgcatcgcac
     2041 gtgagctgac aaagaaattc gaagaattcc gtcgcggcac tgctgccgaa cttcttgcac
     2101 actatgaggc acatccggcg aaaggcgaaa tcgtgatcgt cgtatctggc gcgtagctgg
     2161 atcgaccgcg tattcagcga gccaccaaaa ttcgccggtc aatagcgcgg acaaggcgcg
     2221 gaaaacgtca gtgcgactaa acaaatcgcg atcgtcgtcc aatccagtcg ctgaaatcag
     2281 ctgaaaaaac atgcgatccg acattgcctt ttcgggaaac ttcacaagtc gttggcgtcc
     2341 tgctgactcg ctcaccgttg aattgccgat cgggatcgcc gaaccacctc agagacgttg
     2401 gcgtcgcgac gcgactttcg caagcagact gggcaacttc tgcgattatg gattgatgac
     2461 ccgcctgcca cggtatctaa ggccattgct cgcgggatgc gccgtcacgc ttttgcaggt
     2521 ggtaatggcg gtggctctgc ttgctcctga aaagccgata cccgagcgct attctgcact
     2581 agttcaacac gacagctatt ggttcatgaa cattatcgat cgcggatatc agaccattgt
     2641 cccgccgatt gatcacaaga tgatggaagt ctcgaatgtc gcattttttc cggcataccc
     2701 ggcgattgcg gcgttgctca gaaatgcatt caacatcagc accgggacag cgcttttgat
     2761 caccgctcag ctcgctgcgt ggggtttttg gacctatttc ttcctgttct gcgggcgctg
     2821 gaaagttgcc gcttcacttc agatttgcgg gacacttctc atcctcgcga atccggcagc
     2881 gttctttctc gtcgcggctt actcggaatc gctctttcta atggcgctgc ttggtttcat
     2941 ctattggagc accgcggagg gtcgcgcggc gcgagtgttg gcggctatgc acggaatggt
     3001 tatgtccgcg acgcgaattg tcggaattgc gtgcgctgcg tttcctttgg tgcgttcggc
     3061 ttttcaaacg ggatggcgcg gtttgctgaa gccacgcaaa tggcttcgag agaaccgggc
     3121 agctgtcgga ttaacgtttg tggcggcctg cggcgggatc gcctttttcg tcttgtgcca
     3181 actgcgctgg ggtcactggg acctttacat gctcacgcag gcggctggct ggggcatcgt
     3241 gcccgattat cttgcagtgg ttaggcccga aagttatcgc tggcttgtcc cggcattaaa
     3301 taatcccacc gaaatgagcc agttatcgat gacactgggt gccatgcttt tcgttgccat
     3361 cgcagtttgt gaattggttc cagcgattcg gcgccgtgcc gaattgccag cgcgcgcggg
     3421 gatctatttc tgcgcggcca cgatttatta cctctcggtg agcggcgtcg cctgcgtcgg
     3481 catggaaagt atgttgcgtt acgagttcac cgcgtacgcc ttgatcgtgc tggcgctttt
     3541 gaattttctg cgtcaatttc gtacgccgcc aatatgggtg cgggtttttg ggacggcggc
     3601 agtagcgtta ctcagcgctg cggggctgtg catgcagggc tggtatgtct ggaattttac
     3661 gcggggccac tgggtcgcgt agcaaaacat gaaaccaaag gtcgtcatca tcggtgcggg
     3721 tccggcgggt ctaacggccg gctatttgct ttcgaaaaac gacgtcgatg tcctcgttct
     3781 ggaagccgat cccgtttacg tgggcggcat ttcgcgcacg gcaacttaca agggctttca
     3841 tttcgatatc ggcggtcatc gcttcttctc aaaatccaaa acggtcgaag acttgtggac
     3901 cgagattttg ccgaacgaca tgctcacgcg cccgcggtca tcgcgcattt tttacggcgg
     3961 caaatttttc tcctatccgc tcaagccaat tgaagcgctg ctgaagctcg gcgttttcaa
     4021 atcgattttg tgcgttcttt cctggctgaa agctcgtctg tttccggtcc gaaacccgcg
     4081 aaatttcgaa gaatgggtta gcaatcaatt cggcaaacga ttattcaaca cgttcttcaa
     4141 gagttacacc gaaaaggttt gggggatgag ctgcaaggag atttctgccg actgggcggc
     4201 gcaacggatc aaaggcctgt cgttaggcag cgcaatcaag aacgcgcttg tcccgcagcg
     4261 ttacaacggc gaccggagca aagtcatcaa gacgctgatt aattctttcc gctatccgcg
     4321 gcgaggtccg ggaatgatgt gggaggcgtg tgccgaaaag atgacggcgc tgggcggcaa
     4381 attggaaatg gactgcaggg tgacgcgctg ttcttatgac gatttgtccg gccaatggaa
     4441 tgtcgaatac aaaagcggca acggagatcg gcaaataatc gaaaccgaac atgtcatttc
     4501 gtcggcgccg atgcgggagc tggtctgcgg tttgtcaccg gccgtgagtg aacgaaccaa
     4561 gcgcgcggct gagagcctca agtatcgcga tttcctcacc gtcatgctga ttttgaaaga
     4621 ttgcgagagg ttcgatgaca attggatcta cattcacgat cccagtgtta aagtcggtcg
     4681 tgttcagaat tttcgatcgt ggtcgcccga aatggtgccc gaggcggata aggtttgtta
     4741 cggtctggag tatttttgtt tcgaacacga cggtctctgg gactctggcg acaaggactt
     4801 gatcgagctc gcaaggcgcg agctaattca gatcgggttg gcgaaggaag gcgatttcgt
     4861 tgatggctgc gtcgttcgcc agaagaaagc gtatccggtt tacgatgacg actacgcgcg
     4921 gcacgtcgcc accattcgtc aggaactgga cacgcgttac ccgaacctgc acctggttgg
     4981 ccgtaacggc atgcataaat acaacaatca ggatcacgcc atgatgacag cgatgttgtg
     5041 cgtggaaaat attctcgccg acgcaaagct ttacgatctg tggcaggtga acagcgacgc
     5101 cgaatatcac gaagccggtc ccgctgca
//
LOCUS       DATDAJ010000238         5254 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1338424, whole genome shotgun sequence.
ACCESSION   DATDAJ010000238 DATDAJ010000000
VERSION     DATDAJ010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5254
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338424"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..870
                     /locus_tag="VIS53_05935"
     CDS             <1..870
                     /locus_tag="VIS53_05935"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HEY5767356.1"
                     /translation="KRGVMAMIHVNRGTTSLGVFSEQEVREGLSAGRFAPTDIGWREG
                     MATWQPLSQFPEFGGATAPAVPPVQPGADPTSTTLVGRTGLPWEHRQERGFFNAFIET
                     LSMVLTRPAEAFSVMKREGGLGEPLIYALIGGSVGGIVSALFSLGFQSIGLFADKNNS
                     LAAMTGIGIGSVAMIILLPVFLAIFLFIWSALAHLCLMIVGGANQPFETTFRVLAFTQ
                     GSTGPLQIIPLCGGLIAGVWAIVCYCIGLARAHETDTGRAVLAVFLPLIVCCGGGVLI
                     AFIFMGAWTASHH"
     gene            881..1303
                     /locus_tag="VIS53_05940"
     CDS             881..1303
                     /locus_tag="VIS53_05940"
                     /inference="COORDINATES: protein motif:HMM:NF022281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2752 domain-containing protein"
                     /protein_id="HEY5767357.1"
                     /translation="MQLSVRRLVPGELDHELIWLSASVLSLGLAAVWLTLGLPWPHCM
                     FQHLTNLPCVTCGMTRCGIQFFHGHFLAALQWNPFVFAVLCAVIGFDVYALATVVART
                     PRLRIHVSTQRAKTFLRVSVIFALALNWIYLLLHSRNF"
     gene            1389..2339
                     /locus_tag="VIS53_05945"
     CDS             1389..2339
                     /locus_tag="VIS53_05945"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY5767358.1"
                     /translation="MRLLVTGGAGFIGSHLAEKLLTVGHEVVILDDFNDFYDPQIKHA
                     NITGFAKDLTVCHVDLRESDSVRTVFGREKVDAIVHLAARAGVRPSIQSPRLYYDTNV
                     IGTLHLLEAARVTGVERFIFASSSSVYGASKTVPFSEDQHLTQTLSPYGATKIGGEFL
                     CSTYSHLYQMRVVALRYFTVYGPRQRPDLAIHQFTRRIYAGQAIDQFGDGSTQRDYTY
                     IDDIIQGTVAALDYNGPMYDVFNLGESQTIQLKDLILAIENAAGKKAKINRLPEQPGD
                     MPSTYADISKARKLLGYNPTTKLSEGLPKFVEWFLQNQSG"
     gene            2455..3477
                     /locus_tag="VIS53_05950"
     CDS             2455..3477
                     /locus_tag="VIS53_05950"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY5767359.1"
                     /translation="MISTLPFEQRACFIAGQAKSGTTLLVALLDSHPELLVLPEETAY
                     FPTVLTKYAPRGRRAQFEYLTKQSLSNVLFGGPCKWGKRNYATFPREEFFQTFERTAS
                     DPANAQEDLLVLMVKAYAATLGRSLDSITRWVEKTPANRNHVSAIVSRFPHAKILVTL
                     RDPRAILAAQIALEKTRQTGRFSTYYVIAHWRVAAKLARRVRDAEVPGLVVQYEGLVR
                     EPARTMEEVCGYLDIDFDPDTVLTPTKVGRFWSGNSAARINFSQISTEPVTRWERELS
                     KDEIGWVEWHCRDLMPEFGYEPRLSRRELRYFVRPIRGERPREYLKSRAYSLRDDWIR
                     GADRGV"
     gene            3808..4317
                     /locus_tag="VIS53_05955"
     CDS             3808..4317
                     /locus_tag="VIS53_05955"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY5767360.1"
                     /translation="MNSYSSGRPPRRSRGGGRRRGNQERFRGPQEPAKTQKKTFWQRV
                     AEFFGNGGEKKKAPVQPRNGTQPSSRSARKPERVEVTSPRLYVGNLSFDATESDLFEL
                     FNGVGHVQNAEVVSYRHNQRSKGFAFVQMQTVEEAQRAVEELHDKEFLGRRLVVSGAK
                     SDHHQPRQA"
     gene            complement(4401..5069)
                     /locus_tag="VIS53_05960"
     CDS             complement(4401..5069)
                     /locus_tag="VIS53_05960"
                     /inference="COORDINATES: protein motif:HMM:NF028441.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein-sorting protein"
                     /protein_id="HEY5767361.1"
                     /translation="MRSTFVIGFVCAALSVFAESPPSAKDILDSVRMVESRQQIDLQG
                     QLRQDDMVVPFRLMQNGPLIRYTFTDPDETLELRLGENSSRLELVSDAGTEKVGASKL
                     QEKIRGTIVLYGDLAFKFLYWPTARVLGEEKVRTRKCWKLQLRAPSRESPYSNVLLWV
                     DKASGALMRMEGYDWDAKLIKRFEVVSAQKIERRWFLKQMRVEQFQPGTNQVEARAYL
                     EIKK"
BASE COUNT         1096 a         1451 c         1466 g         1241 t
ORIGIN      
        1 aaacgaggcg ttatggcgat gattcatgtt aatcggggca cgacgagcct gggtgttttc
       61 tccgagcagg aagttcgcga aggactgagt gctggccgtt ttgcgccaac cgacattggc
      121 tggcgcgagg gcatggccac gtggcagccg ctctcacagt ttccagagtt cggaggggcg
      181 actgcacccg ccgtcccgcc tgtccagcct ggcgcagatc cgacctcaac aactctcgtg
      241 gggcgtactg gtttaccgtg ggagcaccgg caagagcgcg gcttcttcaa cgcgttcatc
      301 gaaacgctgt cgatggtgct tacgcgtcca gccgaagcat tcagtgtgat gaagcgcgaa
      361 ggcggcctgg gcgagccgct aatctacgcg ctcatcggtg gatccgtggg cgggatcgtg
      421 tcggctctgt tctcgctcgg tttccagtcg atcgggctgt ttgcggataa gaataacagc
      481 cttgccgcga tgaccgggat aggaatcggc tcggtcgcaa tgattatctt gttgcctgtg
      541 ttcctggcga tttttctttt catctggagt gcgctcgcgc atctctgttt gatgatcgtt
      601 ggcggtgcca atcaaccgtt tgagaccacg tttcgggttt tggcatttac tcaaggctca
      661 accggtcctt tgcagatcat accgctttgt ggcggactga ttgcgggggt ctgggcgatc
      721 gtctgctact gcatcggatt ggcgcgcgct catgaaaccg acactggccg cgctgttcta
      781 gccgtttttc ttccgctgat agtttgttgc ggcggcggag tgctcatcgc atttattttt
      841 atgggcgcgt ggactgcgtc gcatcattag tagtccgcaa atgcagcttt ctgttcggcg
      901 gctcgttccg ggcgaattag accacgagtt gatttggttg agcgcctccg ttttatcgct
      961 cggcttagca gctgtgtggt taacgctagg gttgccgtgg ccacactgca tgtttcaaca
     1021 ccttaccaac ctgccgtgcg tcacgtgcgg aatgacgcga tgcggcattc aattttttca
     1081 cggccatttt cttgcggcgt tgcaatggaa cccattcgtg ttcgcggttc tttgcgccgt
     1141 cattggtttc gacgtatacg cgcttgcaac agtcgtagcg cgcacgccgc ggttgcgaat
     1201 ccatgtctcg acccagcgcg cgaaaacatt tttgcgcgtc tcagtcatct tcgcgctcgc
     1261 gctaaactgg atttatttgc tgctgcactc gcgcaacttt tagaacgtag cgcgtgcggc
     1321 ccgcttgcgg tcgaaaatgt cgcaagccag aggctcgcgc tactttccat ctgtggctaa
     1381 tttgccttat gcgactcttg gtcacaggcg gcgcaggctt tatcgggtcg catctcgccg
     1441 agaagctgct cactgtcggg cacgaagtcg tcatcctgga cgatttcaac gatttttacg
     1501 atccgcagat caagcacgcg aacattactg gtttcgcaaa agacctaacc gtttgtcacg
     1561 tcgatcttcg agagagcgat tcggtgcgaa ctgtgtttgg ccgcgaaaaa gtagatgcga
     1621 tcgtgcatct ggcggcgcgc gctggcgttc ggccctccat tcaatcgccg aggctttatt
     1681 acgacacgaa cgtcatcgga acgttgcatc ttctcgaggc agcacgcgtg acgggagttg
     1741 aacgattcat cttcgcttcc agctcgtctg tgtacggagc ttcaaagacc gtcccatttt
     1801 ccgaggatca acatctgacc cagacactca gtccatatgg cgcgacaaaa attggaggcg
     1861 aatttctttg ctcgacgtac tcgcatcttt accaaatgcg ggtcgtagct ctgcggtatt
     1921 tcactgttta cggaccgcgg cagcgccccg atctggcgat tcatcaattc actcggcgca
     1981 tttacgccgg ccaagcgatc gatcagtttg gggatggcag cacgcagcgc gattacacct
     2041 acattgatga tatcattcag ggcaccgtgg ccgcactcga ttacaatggc ccaatgtacg
     2101 acgtttttaa tcttggcgag agtcaaacga ttcagctgaa agatctgatt ttggcgatcg
     2161 aaaatgccgc agggaagaaa gcaaaaatca atcgcctgcc ggaacaaccc ggcgatatgc
     2221 cgagtaccta tgcagatatt tcgaaggcga gaaaattgct tggctacaat ccgacaacga
     2281 agttgagcga agggttgccc aaattcgttg agtggttttt gcagaatcaa agcggatagc
     2341 gagggaccca agtagtgacg gcttcccatc cgtcacgttt aacgacggct gcccaagcca
     2401 tcgctcctga acggctgcgc tgtatgattc ccacagctgt tgtaatctcc tcgtgtgatt
     2461 tcgacgctcc cgttcgagca acgcgcctgt tttattgccg gccaggcaaa atccggcacc
     2521 accctattag tggcactgct cgacagtcat cccgaactgc tcgtcttgcc cgaggaaaca
     2581 gcctatttcc ctacggttct gaccaaatat gcgccgcgcg gccgccgggc gcagtttgag
     2641 tatctgacca aacagtctct ctcgaacgtg ctattcggcg gcccgtgcaa atggggaaag
     2701 cgcaattacg ccacatttcc tcgcgaggag ttcttccaga cgttcgagcg cacggcatct
     2761 gatcctgcta atgcgcagga ggatttgctg gtcctcatgg taaaagcgta cgcggcgacg
     2821 cttgggcgtt cgcttgattc gatcacgcgc tgggtggaga aaactccggc caatcgaaat
     2881 cacgtcagcg caatcgtcag tcgattcccg cacgcaaaaa ttcttgtcac gctgcgggac
     2941 ccgcgtgcca ttctcgcggc gcaaatcgcc ctcgagaaaa cgcggcaaac cggacgcttc
     3001 tcgacttact acgtcatcgc tcattggcgg gtcgctgcga aactggcccg gcgcgtccgg
     3061 gatgccgaag tccctggact cgtggtccag tacgaagggc tggtgcgtga accagccagg
     3121 acgatggaag aagtgtgcgg gtacctcgac atcgacttcg acccggacac agtcttaacg
     3181 ccgacgaaag ttggtcggtt ctggagcggc aactccgctg cgcggataaa cttttcgcaa
     3241 atcagcaccg aacctgtaac gcgctgggaa cgcgagcttt ccaaggatga aatcggctgg
     3301 gtagaatggc attgtcgcga tctgatgcca gaatttggct acgaaccccg cctgagccga
     3361 cgcgaattgc gctattttgt taggccgatt cgcggcgaac gcccgcgcga gtatctcaaa
     3421 tcgcgagcgt attcactgcg cgacgattgg attcgcggcg cagaccgcgg cgtctgactt
     3481 gcaattcgtg gtaagcaagc cataatgagc gcgagatgtc gggaatcttc ttcgatcttc
     3541 cgagcgtccg gttcctacaa cgattcagat ttcttggact gatgctgcaa acgttcgcgg
     3601 cctcactgtt tcgtttgttg agtgggccgg gttgcgcttt gaggcaagtc cattcccggt
     3661 atgacgaggc ggagtttcca tcggcgtcgc agaatgcttg gaacgagttt gactcggctc
     3721 ttgatgagtc gcgcgccacg gacggtgtcc cgaacctttt cggggcgctc cgcccttttg
     3781 acaattggaa aacagttaag gatcaacatg aactcttatt catccggaag acccccacgc
     3841 cgctcgcgcg gtgggggccg acgcagagga aatcaggaac gctttcgagg gccacaggaa
     3901 ccggcgaaga cgcagaaaaa gacgttctgg cagcgggttg ccgaattttt cggaaacggc
     3961 ggcgagaaaa agaaagcgcc ggtacaaccg cgcaatggca cgcagccatc atcgcgatct
     4021 gcgcgtaagc cggaacgggt tgaagtcacg tcgccgcgtc tttacgttgg caacttgtcc
     4081 ttcgacgcta ccgagagcga tctcttcgaa ttgttcaatg gcgtcggcca cgtgcaaaac
     4141 gcagaggtcg taagctatcg gcacaaccag cgctcgaaag gttttgcgtt tgtgcaaatg
     4201 caaaccgtcg aggaagcgca acgcgcggta gaggaattgc acgacaagga attcctcggt
     4261 cgcaggctcg ttgtgagcgg cgcgaaatcc gatcaccatc agccgcgcca ggcgtgaaac
     4321 aaggaatgac ggcctcccag ccgtcatcat tgattttcga cggctgccaa agccgtcgct
     4381 ccttgaacac cgcggcctcg ctatttctta atttcaaggt aagcgcgcgc ctcgacttga
     4441 ttcgtcccgg gctgaaactg ttcgacgcgc atttgtttca ggaaccagcg gcgctcgatt
     4501 ttttgcgcgg acactacctc gaagcgtttg attagtttcg cgtcccagtc gtagccctcc
     4561 atgcgcatca gtgcgccgct cgccttgtcc acccacaaca acacgtttga atacggcgac
     4621 tcgcgcgagg gtgcgcgtaa ctgcagtttc caacatttcc gggtgcggac tttttcctcg
     4681 cctaatacgc gcgcagtggg ccagtagaga aacttgaatg caagatctcc gtacaacacg
     4741 attgtgcccc gaattttttc ctggagcttc gacgccccca ctttttccgt tccggcgtcg
     4801 ctgactaact cgaggcgtga gctgttttcg ccgagccgca actcaagagt ttcatccgga
     4861 tcggtgaatg tgtaccggat caagggtcca ttctgcatga ggcgaaacgg aactaccatg
     4921 tcgtcctgac gaagctgccc ttgcagatcg atctgctggc gcgactcaac catgcgaact
     4981 gaatcgagaa tgtctttggc tgacggcggc gactcggcga aaaccgacag cgctgcgcac
     5041 acaaagccaa tgacaaatgt cgaacgcatg gatgtaattc gttaaatggt tacaccgtta
     5101 catcggattt gcgattcaac gattcaaaga ttcacgattt aacgtggcga agcctattcg
     5161 tgcttcgtca ttggaccggg tttgtttatt tgaaggctag cgagtaaaac ttaaatccga
     5221 ttgatcctta ttcgcatgga gcagtccctt tttc
//
LOCUS       DATDAJ010000239         9517 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1357668, whole genome shotgun sequence.
ACCESSION   DATDAJ010000239 DATDAJ010000000
VERSION     DATDAJ010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 9517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9517
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1357668"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..1270
                     /locus_tag="VIS53_05965"
     CDS             191..1270
                     /locus_tag="VIS53_05965"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5767362.1"
                     /translation="MQLFDVAIVGGGPAGSSCAAFCAMTGLQSLVLDREKFPREKVCG
                     DCLNPSCWTVLKRLELADRVRDLPHSKLCSVEFISINGRGVTVDLPSGADSEISVKRS
                     LFDDLLLRRARELGANVHEQTTVTGLNRNDHWNIETAAGDFYQARILIGADGRNSTVA
                     HLCNLLQRPARERVALQAHIPLPRDFGNRIVLQFLREGYSGQASVNETQLNLCLVGTP
                     PTISKLRRWAERQFQLPADQSWRTITPLTRSPVPSAHENLFFIGDAACVVEPFTGEGI
                     YYALRSGELAAKAVAKILRGDDRNSALREFGSAYAQMYRGRLWINRLAREAVVRPQLG
                     SLFVHTARIRPEIIKFLTRKIVEKL"
     gene            complement(1354..2238)
                     /gene="folD"
                     /locus_tag="VIS53_05970"
     CDS             complement(1354..2238)
                     /gene="folD"
                     /locus_tag="VIS53_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEY5767363.1"
                     /translation="MAKLIDGRAVAEQVYADLRTDIAELKAKGVTPGLAVVLVGDDPA
                     SRAYVRSKDKMCRELGLHSVKLELSASTTQTELLARVEELNRDSTIHGILVQSPPPEQ
                     IDEAAIVRALDPQKDVDGFHPENVAKLVLEDATGFVPCTPLGVQRLLLESDIEINGAH
                     VVVLGRSMIVGKPLALLLMQKNKNGNSTVTVVHSRSKNLTQITCSADIVVAAIGRAEF
                     LKADHIREGAVVIDVGINRVEDAANERGYRLVGDVAFDEVSKKASAITPVPGGVGPMT
                     IAMLMANTVKAARQASIG"
     gene            complement(2370..3014)
                     /locus_tag="VIS53_05975"
     CDS             complement(2370..3014)
                     /locus_tag="VIS53_05975"
                     /inference="COORDINATES: protein motif:HMM:NF015961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5767364.1"
                     /translation="MKIEGRLARWLIAFGVRLLRVWERTLRYEIDDRAGILGKPMTEN
                     YIGVLWHNRLLIFPLVLQRFFPNRPGAALISASRDGDLLTDAIHRFGYDVVRGSSSRL
                     GASAILQLTEELASGRDVVITPDGPRGPVYELGPGIIFLAQKSGASVLPMNLEYSRCW
                     RLGSWDRFIIPQPFSKVRVLISQPFRVKPTSTPEEFEAERRRVQDAMMSLVDMR"
     gene            complement(3011..3589)
                     /locus_tag="VIS53_05980"
     CDS             complement(3011..3589)
                     /locus_tag="VIS53_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEY5767365.1"
                     /translation="MKLVIAATGASGSIYLQRLLEQIDCAAHEVHLVMSAYAREVAKQ
                     ELDDLEIPAEVSDHSESDMNVPFVSGSARFDAMVIVPCSMATLGRIASGSSDSVLLRA
                     ADVFLKERRKLILVPRETPWNLIHARNVVTLLEAGAIVLPAVPSFYSRPDSLIAVVDT
                     VVWRILDQIGLPTSGAYRWGEKGSAKTSRKKS"
     gene            3696..4499
                     /locus_tag="VIS53_05985"
     CDS             3696..4499
                     /locus_tag="VIS53_05985"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEY5767366.1"
                     /translation="MTKHTLTGNIKRHRAFHSQVLGNRRDVLVYLPPGYRRFSLRRYP
                     VLYLHDGQNVFDAATSFAGVEWGVDETAQRLIHRKLIEPLIIVAVANIGEERVHEYAP
                     TPAVIEPKDHPRKHSRGLARIYGQFLIEELKPFIDRKYRTKPEAEFTGLGGSSLGGLA
                     TLAIGIFYSEVFTRLIVMSPSIWWDEYAIFRLVGILGEKPPLKIWLDTGTSEPGWELA
                     RELCKYLVDKGWHPGFDLAYLEVKGADHSEAAWAARVEPALRFLFPRPK"
     gene            4535..4690
                     /locus_tag="VIS53_05990"
     CDS             4535..4690
                     /locus_tag="VIS53_05990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767367.1"
                     /translation="MCRALRRPQGAGYNLAAGGAGDGFGGNGSGGGTGGGGFGLGGDG
                     FSGMELS"
     gene            complement(4701..5501)
                     /locus_tag="VIS53_05995"
     CDS             complement(4701..5501)
                     /locus_tag="VIS53_05995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767368.1"
                     /translation="MLGIWGKSGGAWWLGVFAAFAVARAEVPASEFRFDRDTFAFANQ
                     TVFEYHEGHASLRKSSATKKDAYNRHCFVMCRTAAQFKKFARFEPRSTPLDDAALAAR
                     VRAITRQAAWAEPLPENQRIVFPGYKDLKEMSTARREVVQLSIGHGWPSYFRISNARM
                     MFQDGTGYQKKTHARLNAALARGELFVAFLTTYPRFSINHSVLIYKLKSSSSNPGVDR
                     YLVYDPNHPESPRELTWSAHDRAFSYQKDWDFVGGFLRVYQVYGKPLQ"
     gene            complement(5506..6492)
                     /locus_tag="VIS53_06000"
     CDS             complement(5506..6492)
                     /locus_tag="VIS53_06000"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEY5767369.1"
                     /translation="MEWQPLDFEKPIFELERRLQDLKSHSTKHDVDLGSAVKELEAKL
                     REMRRHVYDNLTAWQRVQIARHNQRPFALDYIQHCFTNWVELHGDRRFADDRAMPCGM
                     AMLGSLRCVVITHQKGRNTKENVMRNFGCAHPEGYRKALRLMRLGEKFGMPVISLIDT
                     PGAFPGVGSEERHISEAIAVNLREMMKLRVPVIAAVIGEGGSGGALGIGVADHVLIFE
                     NAYYSVISPEACSAILWRDRRHAAEAAEALKLTAQNLLKLEVVDEIIAEPEGGAHRDY
                     DSAAANLGEALRRSLERISQIPVAELLEKRYQKFRRLGVFSEGKTVTAPARV"
     gene            complement(6600..7442)
                     /locus_tag="VIS53_06005"
     CDS             complement(6600..7442)
                     /locus_tag="VIS53_06005"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY5767370.1"
                     /translation="MKWLFVLLLALAIFGGAAWFGYNTFVKEEIEVKKEQRGEVTPPP
                     AVDVSLPEFEAAVKLRQDGKLAEARDALVAVIQKYPAGKHIDEARDILGEVNTTILLS
                     RQPSPEKTEYIVKPGDVLAKIARNLKTTPEMIMRMNNMSGTMLRIGDKLLISHPDFSM
                     VIQRKANLIVLLNHGAFFKQYHVREAKLPPKQPAKITAKVAETMAWKGGKRVGLGSKE
                     YLASTKWIRLAGAPAYTLYAVPDATHPNLDQPPPPTGLGLAAVDLEELSTLVNKSTSV
                     TISD"
     gene            complement(7598..8044)
                     /locus_tag="VIS53_06010"
     CDS             complement(7598..8044)
                     /locus_tag="VIS53_06010"
                     /inference="COORDINATES: protein motif:HMM:NF020967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEY5767371.1"
                     /translation="MVTIATFNEPAQARQLKRRFQDSGIKADVHNEAPVQQFGFMSKP
                     QANAKVMVEDNDFEKAQSLMIEWESTDPDIAAALIRCPQCNSSNIEYPQMTRKFLTPA
                     LVGVLCAAKIIPKEFYCQDCHFTWTNREEPTIGRLWHRFFPGGETS"
     gene            complement(8169..8603)
                     /locus_tag="VIS53_06015"
     CDS             complement(8169..8603)
                     /locus_tag="VIS53_06015"
                     /inference="COORDINATES: protein motif:HMM:NF016153.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HEY5767372.1"
                     /translation="MISTSDLPALNATFNLVSTIFISTGWYFIRRGAWRRHMACMITA
                     LLSSVFFLVGYITYHARVGEKSSGYTGWIAGVYFPILASHVLLAFVTLPLVILTLVPV
                     FRRRWDRHRRIARWTIPIWLYVSVTGVLVYLMLYQWFPPPAH"
     gene            8682..>9517
                     /locus_tag="VIS53_06020"
     CDS             8682..>9517
                     /locus_tag="VIS53_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767373.1"
                     /translation="MPVALEQPQVDHSTQAPRLRRTRRVVAIAIRLTILAAIVAILGG
                     GYYLARRGFGREWRSRVVEELHKRGVEAQIGRLTLDPFRGLVAKNVRIFDYRNRENTL
                     ARISEVSLDINYAALIHHEPFLNALDVRDAQITFPIKTAEGKASRAQLTNLRAHIYFP
                     PEQIYVSQAEGTFCGIRLSARGQLIKRADYQPSASITPEEWQERLSLAQRVVAELQKF
                     SFPAGPPSLQLKFSGDMAELEHTRVEATLRGERLQRGSYEINYLSAAAEWNNQRLDIA
                     HC"
BASE COUNT         2204 a         2666 c         2538 g         2109 t
ORIGIN      
        1 gactgctgcg gatgagccgc cctggctata gtaggcaaat gcgatccacg cgatgagcag
       61 cagaaacgtg atgtgaatcc gcaattggat ccccgcaaca cgaaggattg gaatcgacca
      121 gcccatgcga attagtgtcc tctctgatta aatcgcgcgc cagcgctgtt ttcacagttc
      181 aattaactcc atgcagcttt ttgacgttgc aatcgtcggc ggcgggcccg ccggatcgag
      241 ctgcgctgcg ttttgtgcga tgaccggttt gcaatctctg gtactcgacc gggaaaaatt
      301 tccgcgcgag aaagtatgcg gcgactgttt gaatccgtct tgctggaccg ttttgaagcg
      361 gctggagctt gcggaccgag tgcgggattt gccgcattcg aaactatgtt cggttgaatt
      421 tatctcgatc aatggacgcg gggtgactgt agatcttcca tcgggcgccg atagtgagat
      481 ttcggtgaaa cgcagcctct ttgatgacct gcttttaagg cgggctcgcg agctcggcgc
      541 gaacgtccac gaacaaacca ctgtgaccgg gttaaacaga aacgaccact ggaatattga
      601 aactgctgcc ggcgattttt atcaggctcg gattttaatc ggtgcggatg gacgcaactc
      661 tacggtggcg cacttatgca atttgttgca gcgacctgcg cgcgaacgtg tggcgttaca
      721 agcgcatatc ccgctgccgc gagactttgg gaaccgcatc gttctacaat ttctgcgcga
      781 aggttattcg ggccaggctt cagtaaatga gactcagttg aatctctgcc tggtcggcac
      841 accgccgaca atttcaaaat tgcgtcggtg ggcggaacgc caatttcaac tgcccgccga
      901 tcaatcctgg cgtacgatca cgccgctaac gcgctcgcca gttccctccg cccatgaaaa
      961 tctgtttttc atcggtgacg ctgcttgtgt ggtcgagccg tttaccggcg aaggaattta
     1021 ttacgcgctg cgctcgggcg aacttgcggc aaaagcggtc gcaaaaattc ttcgcggcga
     1081 tgatcggaac tcggcattgc gggaattcgg tagcgcttac gcgcaaatgt atcgcggacg
     1141 tttatggatt aatcgcctcg cacgcgaggc ggtcgtgcga ccgcagctcg gctcgctgtt
     1201 cgttcacacc gcgcggattc gtcccgaaat catcaagttt ctgaccagga agatcgttga
     1261 aaaactgtag gggaaactga cagtttcccg agtggccgcg tcttgggaag ctatcagctt
     1321 cccctacaga gattacagag gtggcatatt ccatcatccg atagaggctt gcctcgccgc
     1381 tttcacagta ttcgccatca acatcgcaat cgtcattggc ccaacgcccc ccggcacggg
     1441 tgtaatcgcg ctcgccttct ttgatacctc gtcaaatgca acgtcgccca ctaaccggta
     1501 gccgcgctcg tttgcggcat cttcgacacg attaattccg acatcaataa cgacagcgcc
     1561 ctcgcggatg tgatcggctt tcagaaattc tgctcgtcca atcgcagcaa caacaatgtc
     1621 agccgagcac gtaatctgcg tgagattttt gctgcgcgaa tgcacaacgg tcaccgtcga
     1681 attgccgttt ttgtttttct gcatcagcag cagtgccaaa ggtttgccaa caatcatgct
     1741 gcggccgaga accacaacgt gagcaccatt gatctcaatg tcgctctcga gaagcaaacg
     1801 ttgcacaccg agcggggtgc acggcacgaa cccggtcgca tcttcgagca cgagctttgc
     1861 gacattttcc gggtgaaatc catccacgtc cttctgggga tccagcgcgc gaacgattgc
     1921 cgcttcgtcg atctgctcgg gcggcggaga ctgaacaaga atgccgtgaa tagtcgaatc
     1981 gcggttcaat tcttcgacgc gcgccagcaa ttcagtctgc gtagttgaag cggacagttc
     2041 caatttcacg gagtgcaagc caagctctcg gcacattttg tctttcgaac gcacgtaagc
     2101 gcgcgaagcc ggatcgtctc caacgagaac tacggcaaga cctggcgtta cgcccttcgc
     2161 tttcagttct gcaatatcag tgcgcagatc agcgtaaact tgttccgcga cagcgcggcc
     2221 atcgataagc tttgccatag tgaagcgcaa ccgtgcctgc gagtacgagt cgcgcaagtg
     2281 acctttcctg tagccgcgtc cctgtgggac gcgcaacgca acatggcaaa ctcctccgct
     2341 tgccacaggc aagcggctac aggattcgcc tagcgcatat caaccagcga catcatcgcg
     2401 tcctgcacgc ggcggcgttc ggcctcgaat tcctcgggtg tactggtcgg tttgacacga
     2461 aacggttggc tgatcagcac gcgcactttc gaaaatggtt gcggaatgat gaaccggtcc
     2521 caacttccca gccgccagca gcgcgaatac tccaagttca ttggcaacac cgacgcacct
     2581 gatttctgcg caagaaagat tatccctggc ccaagttcgt aaaccgggcc gcgcggacca
     2641 tcaggcgtaa tcaccacgtc gcgtcccgac gcaagctcct cagtgagctg aagaatcgcg
     2701 ctcgcgccca gacgcgaact ggagccgcga accacatcgt agccaaaacg gtgaatggca
     2761 tccgtcagca aatcgccatc gcggctggcg ctgatcagcg ccgcgccagg acgattcgga
     2821 aaaaaccgtt gcaaaaccaa cgggaaaatt aacaaccgat tatgccacag cacgccgatg
     2881 taattttccg tcatcggttt gccgagaatg ccggcgcgat cgtcaatttc gtaacgcagc
     2941 gtacgctccc agacccgcaa caaacgaact ccaaacgcga tcagccatcg cgcaagcctg
     3001 ccttcgatct tcaacttttc ttgcgcgacg ttttcgccga ccccttttcg ccccagcgat
     3061 aggcgcccga ggtgggcaat ccgatttgat cgaggatgcg ccaaaccact gtatccacga
     3121 cggcgatgag ggaatcggga cgactataga aggagggaac cgccggaaga acaatcgcgc
     3181 cagcttcaag caaagtgacg acattgcggg cgtgaatcaa attccacggt gtttcccggg
     3241 ggacgagaat cagtttccgt cgttccttca agaaaacatc agcggcgcgc aagaggacgc
     3301 tgtcgctgga accggaagca attcgcccca gcgtggccat cgaacaaggg acgattacca
     3361 tcgcgtcgaa acgcgccgag ccgctcacaa atggcacgtt catgtcgctt tcggagtgat
     3421 cggaaacttc cgcaggaatt tcgagatcat ccagctcctg cttcgcgacc tctctcgcgt
     3481 acgcgctcat aacgagatgc acctcgtgcg ccgcgcaatc gatttgctca agcaagcgtt
     3541 gcagatagat cgatccgctt gcaccagtcg cggcgatcac cagtttcata ttagttgtgt
     3601 cattccgagc gtagcgagca tcttgatggc gagctaatga aatcgcaagc gaaagggttg
     3661 cactacagtt gatctgcacg aagcatctcg ttttcgtgac caaacacacg cttactggca
     3721 atatcaaacg acatcgcgct ttccactccc aggtacttgg aaatcgacgt gatgtgctcg
     3781 tctacttgcc tcccggttat cggcgttttt cgttgagacg ctacccggtt ttgtatctgc
     3841 acgacggcca aaacgttttc gacgctgcca cttcgtttgc cggagtcgag tggggagtcg
     3901 atgaaactgc gcagcgtttg atccatcgaa aactaatcga gccgctcatc atcgtagccg
     3961 tggccaatat cggcgaagaa agagtccatg aatacgcacc tacgccggcg gtgatcgaac
     4021 cgaaagatca cccgagaaaa cacagccgcg gtctggctcg catttacgga caattcttga
     4081 tcgaagaatt gaagccgttc attgacagaa aatatcgaac caagccggag gcagaattta
     4141 ccggactcgg tggatcatcg ctcggtggtt tggccacgct ggcaattgga attttttatt
     4201 cagaggtatt cacgcgttta attgtgatgt ccccatcgat ttggtgggac gaatacgcaa
     4261 ttttccgctt ggtgggaatc ctgggtgaaa aaccgccgct gaaaatctgg ctcgacaccg
     4321 gcacgtctga gccgggctgg gaactggcgc gcgaattatg caagtacctg gtggacaaag
     4381 gctggcaccc tggtttcgat ctagcttacc tcgaggtcaa gggcgccgat cacagcgaag
     4441 cagcctgggc agcgagggtc gaaccggcgc tacgcttttt atttccgcgt ccaaaataaa
     4501 ctgtagccgc ttccatgtgg gaagcgtgag gctgatgtgc cgagcgttgc gtcgcccgca
     4561 gggcgccggc tacaatttgg ctgccggagg cgcaggcgac ggattcggcg gcaatggttc
     4621 gggtggaggt acaggtggtg gcggatttgg tctgggcgga gatggattct ctggcatgga
     4681 gctttcgtaa agaatcgttt ttactgcagc ggtttgccgt aaacctgata aacgcgaaga
     4741 aagccgccta caaaatccca atccttttga tacgagaaag cgcgatcgtg tgcagaccag
     4801 gtaagctcgc gcggcgactc tggatgattt ggatcgtaca caagatagcg atcaacgccg
     4861 ggattcgacg atgaagattt cagcttatag atcaaaacgg agtgattgat gctgaaccgg
     4921 ggatatgttg taagaaatgc gacgaacaat tctccgcgcg ccaacgccgc attcaaccgg
     4981 gcgtgagtct ttttctggta gcccgtaccg tcttgaaaca tcatccgggc attgctgatt
     5041 cgaaagtaac tcggccaacc atgtccgatg cttaattgca cgacttcgcg acgggccgtg
     5101 ctcatttcct tcaggtcctt atatcccgga aagacaattc gttgattttc cggcaacggc
     5161 tccgcccagg ccgcctggcg tgttatagcg cgaacgcgag ccgccagcgc cgcgtcatcc
     5221 aagggagtac ttcgcggctc gaaccgcgca aatttcttga attgggctgc cgtgcggcac
     5281 atcacaaagc agtgacgatt atatgcgtct ttctttgtcg ctgacgattt tcgcagggaa
     5341 gcgtgtccct cgtgatactc aaacaccgtt tgattagcga aagcgaacgt gtcgcgatca
     5401 aaacggaact ccgacgcggg gacttcggca cgcgcgacag cgaaagcggc aaaaacaccg
     5461 agccaccaag ctccccccga tttgccccag atccccaaca tcacatcaaa cgcgagccgg
     5521 ggccgtgacc gtttttcctt ccgaaaacac acccagacgg cgaaatttct gatatcgttt
     5581 ctccaacaat tccgcaaccg gaatctgaga aattcgctcc aggctccggc gcagcgcttc
     5641 tccaagattc gccgcagcgg aatcgtaatc gcggtgcgcg ccgccctccg gctcggcaat
     5701 gatttcgtca accacctcta gtttcaaaag attctgcgcc gtcaatttga gcgcctcagc
     5761 ggcttcagca gcgtgtcgcc ggtccctcca taagatggcg gagcaggctt cgggactaat
     5821 cactgagtag taggcgttct cgaaaatcaa aacgtgatct gccaccccga tgccgagtgc
     5881 gcctcccgag ccaccctcac cgattactgc cgcaatgacg gggacgcgga gcttcatcat
     5941 ctcacgaaga ttcacagcga ttgcctcaga aatgtggcgc tcctccgatc cgacacccgg
     6001 aaaagcgcct ggcgtatcga tgagagaaat caccggcatc ccgaattttt cgccgagacg
     6061 cattaagcgc aacgccttgc gatagccctc cggatgcgcg cacccgaagt tgcgcatcac
     6121 gttctccttg gtattgcgcc ccttttggtg agtgataaca acgcaacgca ggctgccgag
     6181 catcgccatt ccgcatggca ttgcgcgatc gtcggcaaag cggcgatcgc cgtgcaattc
     6241 aacccagttc gtaaaacagt gttgaatgta atcgagtgcg aagggccttt gattgtgccg
     6301 ggcgatttgg actcgctgcc aggccgtcaa attgtcgtaa acatgacgac gcatttcccg
     6361 aagctttgcc tcaagttctt tcaccgccga gccaagatcg acgtcgtgct ttgtggaatg
     6421 actttttaaa tcctgcaacc gccgttccaa ttcaaagatc ggcttttcaa aatcgagcgg
     6481 ttgccattcc atggtcaggt taaaatctta caacgtaaaa gattacaacg ttaagtgcgt
     6541 cgcgggatca ggttcgtttg cgcttatttg taacattgta actcttttaa cgttttagct
     6601 cagtcactaa tcgtcaccga ggtgcttttg tttacaagcg tacttagctc ctcgagatca
     6661 accgcggcga gaccaagacc ggtcggcggg ggcggttggt cgagattggg gtgcgttgca
     6721 tccggcactg catacaacgt ataagctggc gcgccggcca gcctgatcca ctttgtgctg
     6781 gccaggtact ccttgctgcc gagcccaacg cgtttgccgc ctttccaagc catcgtttca
     6841 gcaactttcg ccgtgatttt ggccggctgt ttcggcggca gctttgcttc gcgcacgtga
     6901 tattgcttga aaaacgcgcc gtggttcaac agcacaatca ggttggcctt gcgctggatc
     6961 accatggaga aatcgggatg tgagatcagc agcttgtcac caatccgcag catggtgccg
     7021 ctcatattat tcatgcgcat aatcatctcc ggtgtcgtct tcaggttgcg cgcaatcttc
     7081 gccaacacgt ctcccggttt cacaatgtat tcggtctttt ctggagatgg ctggcgcgac
     7141 agcaaaattg tggtgttcac ttccccaagg atatcccgag cttcatcgat gtgtttccca
     7201 gcaggatatt tttggatgac agcgacaagc gcatcacgcg cttcagcgag ttttccatcc
     7261 tgacgaagtt taaccgccgc ctcgaattcc ggcaggctaa cgtccaccgc aggcggcgga
     7321 gtgacttccc cgcgctgctc ctttttcact tcgatttctt ctttgacgaa cgtgttgtaa
     7381 ccgaaccacg cagccccgcc gaagatcgcc agcgccaaaa gtaggacgaa aagccatttc
     7441 atggacgaac agggaaacgc ccaacgtcca acgcccaacg cccaacgctc aactcagaag
     7501 cagtccattg agtgttcagc gttgagcgtt gagcgttgag cgttttctgc atccctaatt
     7561 gggtcctccg cttatgtgac ccgcttttcg ctaggaccta actggtctcc ccaccgggga
     7621 aaaaccgatg ccaaaggcgt ccaattgtag gctcttcccg gtttgtccag gtaaagtggc
     7681 aatcctgaca gtaaaattct ttcggaataa ttttcgccgc gcaaagcacg ccgacgagtg
     7741 cgggcgtcaa aaatttccgc gtcatctggg ggtactcgat atttgaagag ttgcactgcg
     7801 ggcagcgaat gagcgcagcg gcgatatctg gatcagtcga ttcccattcg atcatcagac
     7861 tttgcgcctt ctcgaaatcg ttgtcttcca ccatcacttt ggcgttcgct tgcggcttcg
     7921 acatgaagcc aaactgctgc acgggcgcct cattatgaac gtcggccttg atcccggaat
     7981 cctgaaaacg ccgtttaagc tgacgcgctt gggcgggctc attaaacgtg gcaatggtca
     8041 ccataaagtc tccttaatgc gcggcagcac atcgccctga tcaaacatca aatcgccgta
     8101 gagcgcaagg ttttgacatc ggagtgattt gcgagtggtc cggcaactgc cagcggacgc
     8161 taaagcgctt aatgagcagg tggaggaaac cattggtaca gcatcaagta aacgaggact
     8221 ccggtaaccg acacgtacag ccagattggg atcgtccaac gcgcgattcg cctgtgccgg
     8281 tcccatcggc gacgaaaaac cggaacaagc gtcaaaatga ccaacggcag cgtcacaaac
     8341 gccagcagaa cgtgtgaggc aaggatcgga aagtaaaccc ctgcgatcca gccggtgtat
     8401 ccggaagatt tctcgccaac gcgcgcatga taagtgatgt agccgaccag aaaaaaaaca
     8461 gacgagagga gagctgtgat catacacgcc atgtgacggc gccacgcgcc gcgccggatg
     8521 aagtaccaac ctgtggaaat aaaaatcgtg ctcacgagat taaacgtggc attgagggct
     8581 ggcaggtcgg aggttgaaat cacgttgaag ccgctgaacc gttaaaccgt taaattggtc
     8641 tatccctccg acggttcaac ggtttaacgc ttcatttacg aatgcctgtc gctttggaac
     8701 aacctcaggt tgatcattcc acgcaagcgc cacgattgcg ccggacgcgc cgcgttgttg
     8761 caattgcaat tcgtctgaca attctcgccg ccatcgttgc aatcttaggc ggcggttatt
     8821 atctggcgcg acggggattt ggccgtgaat ggcggtcccg cgtcgtggaa gagctacaca
     8881 agcgcggcgt ggaagctcag atcggacggc taacgctgga tccgttccgc ggtttggtcg
     8941 cgaaaaacgt aaggattttc gattacagaa accgcgaaaa cacattagcc cggatcagcg
     9001 aagtttctct cgatattaat tacgcggcgc tcatccatca cgagccgttt cttaacgccc
     9061 tggatgtgcg cgacgcacag ataacatttc caatcaagac tgccgaagga aaagccagtc
     9121 gcgcgcaact gactaacctc cgcgcgcaca tttattttcc accggaacag atttacgtca
     9181 gtcaggcgga gggcactttt tgtgggattc gactttcggc gagaggacaa ttaatcaagc
     9241 gcgccgatta ccagccatcg gcatcaatca caccggagga atggcaagaa cgattgtcgc
     9301 ttgcccagcg tgtcgtggct gaactgcaaa agttcagttt ccccgcaggg cctccttctt
     9361 tgcaattgaa gttcagcgga gacatggccg agctcgaaca caccagggtc gaggcgacct
     9421 tgcgcggcga acgactacag cgaggcagct acgaaattaa ttatctgtcc gccgcggccg
     9481 aatggaataa ccagcgattg gatattgcgc attgtga
//
LOCUS       DATDAJ010000240         2357 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1371409, whole genome shotgun sequence.
ACCESSION   DATDAJ010000240 DATDAJ010000000
VERSION     DATDAJ010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2357)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2357
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1371409"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /locus_tag="VIS53_06025"
     CDS             complement(<1..1250)
                     /locus_tag="VIS53_06025"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5767374.1"
                     /translation="MSEFQFGGEFVWWPSPELIAKSNLQQFIEKNRLGSYDELMRRST
                     TDIAWFWDTVLRDLDIQFYKPYSRIVDLTEGKPLAKWCVDGDMNIVHNLLDKYADTPT
                     DMKVAIKSEIEDGTSRSVTYRELRDQVDHMANSLRSLGLGKGDAIGVFMPMVPEIVVA
                     MLAIIKIGGIFLPLFSGFGVAAIVSRLDDAEAKALFTAAGTYRRGKFCPMKSVADDAA
                     AQIPTLRHLIVLNQAGEWLIEDLQPDAGPPTTLPGPFDDSPTERTSAEDPMMIIYTSG
                     TTGKPKGAVHTHCGFPIKSAQDMWHGLDLHPDETLFWMTDMGWMMGPWEVFGTLLLGG
                     TMMLYDGAPDFPGPDRVWSLVDRHKVTALGVSPTLIRALRRHGDEIVHQHDLSSLQKF
                     ASTGEPWNPDPWMWLFQNVGREKLP"
     gene            1413..1991
                     /locus_tag="VIS53_06030"
     CDS             1413..1991
                     /locus_tag="VIS53_06030"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEY5767375.1"
                     /translation="MRIWTIGHSTRTIDDLISLLKENEIKLLVDVRAWPGSKRYPQFN
                     RDALAESLNAHGIRYEHFPELGGKRKSKPDSRNTAWRNASFRGYADYMETQQFRTGVE
                     RLLAFARSGGLGSRRNERDGWEAVTPCRTAIMCAEAVWWRCHRCLIADYLKARGLEVL
                     HVLGANKVEPHPYTSAARIVNGELSYETESLL"
     gene            complement(2155..>2357)
                     /locus_tag="VIS53_06035"
     CDS             complement(2155..>2357)
                     /locus_tag="VIS53_06035"
                     /inference="COORDINATES: protein motif:HMM:NF012308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serpin family protein"
                     /protein_id="HEY5767376.1"
                     /translation="HKTFIAVDEKGTEAAAATAVAMMTATALRSPSPPPIEVKVDRPF
                     VYAIQHVPSGVCLFLGRVTDPR"
BASE COUNT          513 a          646 c          685 g          513 t
ORIGIN      
        1 ggaagttttt cgcgtccgac attttgaaac aaccacatcc atggatcggg attccacggt
       61 tcgccggtcg aagcgaattt ttggagcgaa gaaagatcat gttgatgcac aatttcgtcg
      121 ccatgccttc gcaatgcgcg aatcagtgtt ggcgagacac ccagcgcggt cactttatgt
      181 cgatcgacca atgaccagac gcggtccggt cccggaaaat cgggagcgcc atcgtaaagc
      241 atcatcgtcc cgccaagcag caaggtgccg aaaacttccc acggtcccat catccagccc
      301 atgtcggtca tccagaagag agtttcgtcg gggtgcagat cgaggccgtg ccacatgtcc
      361 tgcgccgatt tgatcgggaa accacaatgc gtgtgcaccg cgccttttgg ttttcccgtc
      421 gtgcccgatg tgtagatgat catcatcggg tcttcggctg atgtgcgctc cgttggtgag
      481 tcatcgaaag gaccaggcaa agttgtcggc ggtccagcat caggctggag gtcttcgatg
      541 agccattcgc cagcctggtt aaggacgatc agatgccgca gcgttggaat ttgcgcggcc
      601 gcatcatcgg cgaccgattt catcgggcaa aatttcccgc ggcggtacgt tccagcggca
      661 gtgaagagag ccttggcttc ggcgtcatcc aatcgcgaca cgattgctgc tacgccgaat
      721 cccgaaaaga gcggcagaaa aattccgccg atcttaatga tggccaacat cgcgacgacg
      781 atttctggaa ccatcggcat gaaaactccg atggcatcgc ctttgccgag cccgagactg
      841 cggagggaat ttgccatatg atcgacttga tcgcgcaatt ctctgtaggt aaccgaacgc
      901 gaagtgccgt cttcgatttc ggatttgatc gcgaccttca tgtcggtcgg cgtgtccgcg
      961 tatttatcga gcaggttgtg gacgatattc atatcgccgt ccacgcacca tttcgccaac
     1021 ggtttgccct cagtcagatc aacgatgcgc gagtacggtt tgtaaaactg aatatcgagg
     1081 tcgcgcagca ctgtgtccca aaaccaggcg atgtcggtcg ttgatcgtcg catcagttca
     1141 tcgtacgaac cgagccgatt tttctcgatg aattgctgaa ggttcgattt tgcaatcagc
     1201 tccggtgatg gccaccagac gaattcaccg ccgaattgaa actcgctcac gcagtgattg
     1261 tgcgcgctct tcaattgtag ggcaaccgct tcggttgccg aatcacacgg caggcggagc
     1321 gcctgcccta caatcacgtt tgggaaaaac gccgggaata ccgtttagat tacttgccgg
     1381 ctcagggcca atcggcatct gttacttgaa ccatgcgaat ctggaccatc gggcactcga
     1441 cacgaacgat cgatgacctc atttcgttgc tgaaggaaaa tgagatcaag ttgctggtgg
     1501 acgtgcgcgc gtggccgggc tccaagcgtt atccgcagtt caacagggac gcgctggcgg
     1561 aatcgctgaa cgcgcacgga atccgttacg aacatttccc ggagctgggc ggcaaacgaa
     1621 aatccaagcc ggactcgcgc aacactgctt ggcgcaacgc gtcgttccgc gggtacgccg
     1681 attacatgga gacgcagcaa tttcgaacag gcgtagaacg ccttcttgcc tttgcacgga
     1741 gcggcggctt gggcagccgt cgaaatgagc gcgacggctg ggaagccgtc actccttgcc
     1801 ggaccgcgat catgtgcgcg gaagcagtct ggtggcgttg ccatcgctgc cttatcgcgg
     1861 attacctcaa agcgcgcggg ttggaagtgc tgcacgttct cggcgcaaac aaagtcgagc
     1921 cgcatccata cacatcggcg gcgcggatcg tgaatgggga attgagttat gagacggagt
     1981 cgctgttgta gggcgctctc tgtgagacgc cagcgatttc aacatcggcg tctgtgaaac
     2041 gccattccgg attggctcaa ggatcggcgg cttgagtaat cgccgctaac gtagcgcgag
     2101 cgtcctcgct tgcgagattc tgggtgcaag cagcaagcga gacgcatgcg ctacctatcg
     2161 cggatcagtg acgcgcccaa gaaacaaaca gacgccgctg ggcacgtgct gaatcgcgta
     2221 aacaaacggg cgatcgactt ttacttcgat tgggggcggg gaaggtgatc gcaaggcggt
     2281 agctgtcatc atcgccacgg ctgtcgctgc cgctgcttcg gttccttttt cgtccaccgc
     2341 gatgaatgtt ttgtgga
//
LOCUS       DATDAJ010000241         4111 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1374829, whole genome shotgun sequence.
ACCESSION   DATDAJ010000241 DATDAJ010000000
VERSION     DATDAJ010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4111
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1374829"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VIS53_06040"
     CDS             <1..759
                     /locus_tag="VIS53_06040"
                     /inference="COORDINATES: protein motif:HMM:NF024682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEY5767377.1"
                     /translation="QSVRVVELLETPYPDFPGLNLTFEVREGLRKHERPYKFPTPSVE
                     EYDCPSVEGQVADLADEITYYSHDLDDALDFEILTLGRLEENEVWRNSHRAVLARYND
                     AREPELHKLIIRDIIDREVHDLVVTSAESIAESGVQSADDVRRQAAPLIRYSDELAEA
                     NRALRRFLYQNVYYHPRVAEVNQRACEMLRRVFEAYLADPDRLGDGAMRRVEKEGLHR
                     TVCDYIAGMTDRYVMEEHARIAGRDGSPEPPSRM"
     gene            complement(800..1429)
                     /locus_tag="VIS53_06045"
     CDS             complement(800..1429)
                     /locus_tag="VIS53_06045"
                     /inference="COORDINATES: protein motif:HMM:NF014269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY5767378.1"
                     /translation="MASSITLPQQLPVMPLPGAVLFPHALLPLYIFEPRYRKMLEHSL
                     REHRMFCVTLIKPICPDWHACEDFFHLATAGLIRACVERSDGTSNLVLQGLQRVRFTS
                     FKQQKPFPIASIDAVESRDSTTVETEALGAKVIELYGSLKHDRRQLPAKLDRYLSELR
                     DLEMLADLMASTFVNDPLRRQRVLEERSLNQRLRFLIRYLRDEIGNPAA"
     gene            complement(1508..2194)
                     /locus_tag="VIS53_06050"
     CDS             complement(1508..2194)
                     /locus_tag="VIS53_06050"
                     /inference="COORDINATES: protein motif:HMM:NF013640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEY5767379.1"
                     /translation="MMARHSTKRRPRVVGVIASGADLERAVRMPRPPDLFELRLDHLA
                     GIADEVEKVLPRLRTPLIITARDPREGGAKKLQLRQRRDLLARFLNHADYIDVELGAA
                     RALRALLAIAKTKNVRRIISFHNFKATPSARILATKAGEAKSQGADIFKVATRIDTPT
                     ELGRLLEFITSSRLDLALAVMGIGRLGAISRVLLSRAGSVLIYASVGAATDVEGQMSL
                     EQLRALGFGP"
     gene            complement(2191..2793)
                     /locus_tag="VIS53_06055"
     CDS             complement(2191..2793)
                     /locus_tag="VIS53_06055"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEY5767380.1"
                     /translation="MFTGLIEEVGRVVATRASNHGTKLEIAAPLTAREAQPSESIAVN
                     GCCLTLTSCRGDRLSFDLLEETIARTNLKKLQQDSPVNLERALRADGRLGGHFVQGHV
                     DCVSRIIAFDRKGADFRLEVELPENLGHYVVSKGSITVNGISLTVAEVLPRSFAVWII
                     PYTKIHTNLDGATIGDLVNLEFDILAKYVERMIAPSVTKE"
     gene            2880..>4111
                     /locus_tag="VIS53_06060"
     CDS             2880..>4111
                     /locus_tag="VIS53_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767381.1"
                     /translation="MEDPSVFGIPVDFILFGLTLAGVAVFHKCTMRVALTGLVTIIIY
                     KIAFTGFKTGDGVTGFISHVGHEWVILVNLLCLLLGFALLSQHFEKSQLPLVLPKFLP
                     HDWKGGFVLLVMVWVLSSFLDNIAAALIGGAMAHQLFRGKVHIGYLAAIVAASNAGGS
                     WSVLGDTTTTMMWIAGVAPSQVFEAITAATVALLVFGIPAAIKQHRHSPILKRAHERA
                     HIDWIRIGIVALILVVAVAANITVNTKFPKHSGSFPFIGVAVWTAIVISIGMRRPDWE
                     VLPRTLRSSIFLLSLVLIASMMPVERLPNPSPETTLGLGFVSAVFDNIPLTALALKQG
                     GYDWGHVAYAVGFGGSMIWFGSSAGVAISSIFPEAKSTFSWIRGGWFVVLAYLVGFAA
                     MLAMTGWHPDPKEEPKHGR"
BASE COUNT          894 a         1093 c         1171 g          953 t
ORIGIN      
        1 cagagtgtgc gcgtggttga attgctcgaa acgccttatc cagattttcc aggtttgaac
       61 ctgacattcg aagtacgtga aggtctgcgg aagcatgagc gaccttacaa attccccact
      121 ccgtcagtag aagaatatga ttgtccgtcg gtggaggggc aggttgccga tttggcagac
      181 gagatcactt attacagcca cgacctcgat gacgcgcttg attttgaaat cttgacgcta
      241 gggcgattgg aagaaaacga ggtgtggcgc aacagtcatc gtgcagtgct cgcgcgttac
      301 aacgacgcgc gcgaaccgga gctgcacaag ctgattattc gcgacatcat tgatcgcgaa
      361 gtgcacgatt tggttgtgac cagcgcggaa tcgattgccg aatcaggcgt gcagagcgct
      421 gacgacgtgc gccggcaagc cgcgccgctt attcgttaca gcgatgaatt ggccgaagcg
      481 aatcgggcgc tccggaggtt cctgtatcaa aatgtctatt accatccgcg cgtggcggaa
      541 gtgaaccaac gcgcttgcga gatgctgcgg cgcgtttttg aagcgtacct tgccgatccc
      601 gacaggctcg gcgacggcgc gatgcgacga gtcgagaagg agggattgca tcgcacagtt
      661 tgcgattaca tcgcgggaat gaccgaccgt tatgtaatgg aagaacatgc ccggattgcc
      721 ggtagggacg gttcacccga accgccctcg cgaatgtgat cacgtgatga aacaggcgat
      781 tgaggtcaat cgcccctacc tacgcggcag ggttgccgat ctcgtcgcgt aaatatctga
      841 tgagaaaacg gaggcgctga ttcagcgagc gttcttcgag gacgcgttgc cggcgcaatg
      901 gatcgttcac gaacgtcgaa gccattaagt ccgccagcat ttccagatcg cgtaattcgg
      961 aaagataccg atccagtttc gcaggaagct gacggcgatc gtgctttagg ctgccgtaaa
     1021 gctcgatcac ttttgcgccg agcgcttcgg tttcaaccgt cgtcgaatcg cgcgattcta
     1081 cagcatcgat gctggcgatc ggaaacggct tctgctgttt aaaactggtg aagcgcacac
     1141 gttgcagacc ttgcaggacc aaattcgacg tgccatcgct gcgttcgaca catgcgcgaa
     1201 tcaatccggc ggttgcaaga tggaaaaaat cctcacaggc atgccaatcc gggcagatcg
     1261 gcttgatcaa cgtcacgcaa aacatccgat gctctcgaag cgagtgctcc agcattttgc
     1321 gataccgcgg ttcgaaaatg taaagtggca gcagcgcatg cggaaacagc accgctcccg
     1381 gaagcggcat cacgggtaat tgctggggta aagttatgga tgaagccatg tttcgtcatc
     1441 tgtaccttat acgtgtcgag caaagggcaa gtgtcgaggg tgaatagagt caaaccgttc
     1501 accagtttca cggaccgaag cccaacgcgc ggagttgttc cagcgacatt tgtccttcga
     1561 cgtctgtcgc ggcaccgacg gatgcgtaaa tcagcactga gccggctcgc gagagtagga
     1621 cacgtgagat tgcgccaagt ctgccgatgc ccataacggc aagcgcgaga tccaaacggc
     1681 tgcttgttat gaactcgagc aaacgtccga gctccgtcgg cgtgtcgatg cgcgtagcaa
     1741 ctttaaaaat atctgcgcct tgcgatttgg cctcacccgc tttggtcgcc aagattcgcg
     1801 cactcggtgt agccttgaaa ttgtggaatg aaatgattcg ccggacgttt ttcgttttgg
     1861 cgatcgcgag caaggctcgc agcgcacggg ctgcgcctaa ctcgacatcg atataatcgg
     1921 cgtgattcaa gaatcgagcg agcagatccc gccgttgccg cagttgaagt tttttagcgc
     1981 caccttcgcg cggatctcgt gctgtgatga tgagcggcgt gcgcagcctc ggtaacacct
     2041 tttccacttc atcggcgatg cctgccagat gatccaagcg caattcgaac aaatccggcg
     2101 gcctgggcat ccgcaccgcc cgctccagat cggcacctga tgcgatcaca ccgacaaccc
     2161 gcggacgccg cttggtcgag tgacgcgcca tcattctttt gtcaccgacg gcgcaatcat
     2221 tctctcgacg tacttggcca ggatgtcgaa ctcgagattt acgagatcgc cgatggtggc
     2281 accatcaagg ttggtgtgga ttttggtgta gggaatgatc cagacggcaa aacttctcgg
     2341 aagaacttcc gcaacggtaa gactgattcc attaaccgtg attgaaccct tggaaactac
     2401 ataatgccct aagttttccg gcaattcgac ttcgagtcgg aagtctgcgc cttttctatc
     2461 gaacgcgatg atgcgcgaga cgcaatctac gtggccttga acgaaatgtc cgccgaggcg
     2521 tccgtcagcg cgtaacgcgc gctccagatt tacggggctg tcttgctgta gtttcttcaa
     2581 gttagtgcga gcaattgttt cttcgagcag atcgaaactc agccggtcac cgcggcacga
     2641 agttaacgta agacaacaac cattcacggc gatgctctca ctgggttgcg cttctctggc
     2701 agtgagcggc gcagcaattt ctaattttgt tccgtgatta ctcgcacgcg tcgcgacaac
     2761 tctgccgact tcttcgatta atccggtaaa cacgaaccta gcgtaatggt cgatagccaa
     2821 tagccaaccg cgaattgctg attgccgaca caggacgaat caggtatcgg ctttcgcgca
     2881 tggaagatcc ctcggtgttt ggtattccag tcgatttcat tttgttcgga ctaacattgg
     2941 ccggcgtcgc cgttttccat aagtgcacga tgcgagtggc cctgacggga ttggtcacga
     3001 tcattattta caaaatcgcg ttcacaggtt tcaaaaccgg cgacggagtg acgggattca
     3061 tttctcatgt cggacatgag tgggtgattc tcgtcaacct gctatgtctt ctgctggggt
     3121 ttgcgctgtt gtcccagcat ttcgaaaaaa gccagctgcc attggtactg ccaaaatttc
     3181 ttcctcacga ctggaaaggc gggttcgttt tgctggtgat ggtctgggtt ctgtcgagtt
     3241 ttctcgacaa tatcgccgcg gcgctgatcg gcggcgcgat ggcgcatcaa ctttttcgcg
     3301 gcaaagtgca catcggttat ttggcggcga tcgtggccgc ttcgaatgcc ggtggttcct
     3361 ggagcgtact gggcgacacg acaacgacga tgatgtggat cgcaggcgtc gcgccgagcc
     3421 aggtgtttga agcaattaca gccgcaaccg tagcgctgct tgttttcgga attcccgcag
     3481 cgatcaagca gcatcggcac tcgcctatcc tgaaacgggc tcacgaacgc gctcacatcg
     3541 attggattcg gatcggtatt gtggcgctga tcctcgtcgt agccgttgcc gcaaacatta
     3601 cggtgaacac aaaatttcca aagcattccg gcagttttcc atttatcggc gtcgcagtct
     3661 ggacggcgat cgtgatctcc atcgggatgc gccgtcctga ctgggaagtg ctgccacgaa
     3721 ctctgaggag ttcgatcttt ctgctctcgc tggtcttaat cgcctcaatg atgccggtgg
     3781 aacgtttgcc caatccctcc ccggagacca cgctcgggct cggcttcgta tccgcagtgt
     3841 tcgacaacat tccgctgacc gcactggcgc tgaagcaagg cggatacgat tgggggcacg
     3901 ttgcctacgc agtgggattt ggcggttcga tgatctggtt tggatcgtcc gcaggcgtcg
     3961 caatttcgag tatttttcca gaggccaaat cgacgttctc ctggatcagg ggcgggtggt
     4021 ttgtggtttt ggcatatttg gtcgggttcg ccgcgatgct cgcgatgacc gggtggcacc
     4081 ccgacccaaa ggaggagccc aagcatggcc g
//
LOCUS       DATDAJ010000242         3205 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1375050, whole genome shotgun sequence.
ACCESSION   DATDAJ010000242 DATDAJ010000000
VERSION     DATDAJ010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375050"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..633)
                     /locus_tag="VIS53_06065"
     CDS             complement(163..633)
                     /locus_tag="VIS53_06065"
                     /inference="COORDINATES: protein motif:HMM:NF040320.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767382.1"
                     /translation="MTANLPQTSSKLDGPLVKQFSVFLPNKVGAMLEIVKLLSTHHTH
                     VVALSVSESTDSAIARIIASDPQGVEKLFRENNVGFGVSQVVVVEMKEVATQLVKLLA
                     ALVMAEVNVHFAYPLLIRPRGFSAIALHVDDTDCASSVLMGEGFKMLSQDDISR"
     gene            855..2309
                     /gene="lysS"
                     /locus_tag="VIS53_06070"
     CDS             855..2309
                     /gene="lysS"
                     /locus_tag="VIS53_06070"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEY5767383.1"
                     /translation="MEDENELIALRRKKLEVLRAKGIEPFGTGFDLSDSIAQAREQFK
                     EGETRRVAGRITAHRDMGKSHFLDLRDVTGRIQIYIHAKEIGPELFELFRLLDIGDFI
                     GVEGTCFITKSGEPTVKVQTFQLLAKALRPLPEKWHGLQDIEARYRQRYLDLLTNERS
                     RAVFEKRIAIVRETRRFFEDRGFVEVETPILQATAGGAAAEPFKTHHNALGIDLYLRI
                     ALELYLKRLLVAGFNKVFEINRNFRNEGISRKHNPEFTMLEAYWAYADFEKIANLVEE
                     LICYLAEKICGSLTIEHRDANGNVTRTINLKRPWRRVRYRDLMREVAGKDWFELSPEE
                     RRGRAMNEFKLEILPQLADFEVTQHVFEKLIEEKTMDPLFVTHCPKELVPLAKQNAED
                     SSVVDVFELIINGVEIAPGYSELNDPLVQRQRLLEQAGEEKQNIDEEFLLALEYGMPP
                     AGGFGIGIDRLTMLLTGAESIRDVILFPLLRPKK"
     gene            2460..>3205
                     /locus_tag="VIS53_06075"
     CDS             2460..>3205
                     /locus_tag="VIS53_06075"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEY5767384.1"
                     /translation="MRRIISLLFLIVCSSAAAVVPAKPERHVVVVVWDGMRPDFVTEQ
                     NTPTLWKLAREGITFRNHHAVYPSATMVNGTAIVTGTYPGKSGIIANHVYRPDIDPHH
                     SIDVELPAVVKKGDEVSGGKYILVPTIAELVQHAGGRTVIASAKTVGLLLDRQADVGT
                     AKNCVTLFAGKSLPAEIIPSITATLGPFPSGHLQQDAWTTKAMTDCFWKDGVPALSVL
                     WLGEPDLTQHESAPGAPAALAAIKSADENLA"
BASE COUNT          758 a          857 c          870 g          720 t
ORIGIN      
        1 gagggcgacg tgaaagcttg gatcgatttg aatagcccgt gagaaaagag tccgcatggg
       61 gagaataacc cagtcttgtt atccgcgctg ttgctagcct gtcaacaatc tgccggatat
      121 ttgaccgctg gaacgttaaa acgttagaac gctaatcgtc ggctatcgtg agatatcgtc
      181 ctggctcagc attttgaatc cttcgcccat aagcacggag gaggcgcaat ccgtgtcatc
      241 tacgtgcaga gcgatcgcgg aaaatccgcg tggacggatc agcagcgggt aagcgaaatg
      301 cacattcact tccgccatga ccaacgctgc gagcagtttt accagttgcg tggctacttc
      361 tttcatctca accaccacaa cctggctgac gccgaaacca acattgtttt ccctgaacaa
      421 tttttccaca ccctgcgggt cgctcgcgat gatccgcgca atcgctgagt cagtggattc
      481 cgatacgctg agggcgacaa cgtgcgtgtg atgtgtgctg agcaacttca caatttccag
      541 catcgccccc actttgttcg gcagaaaaac cgagaactgc tttaccagcg gcccgtccag
      601 cttggaactc gtttgcggca agttagcagt catttgaatg atggcggcgc gacggaagct
      661 catgcggacg cgccagtcca aactatctca ttgtagatgt tttgttggca aacctaatat
      721 agtaaaccga agcgcccaag gagtgacagc ttcccagccg tcatgtttcg aggctgccca
      781 agccttcgtt ccttgttgaa gtgacgattt gacgtggcga agcacgtgtc gcgccttaca
      841 ttcgctgtcc gaatatggaa gacgaaaacg agctgatcgc gctcagacga aaaaaacttg
      901 aggtgctgcg cgcgaaaggc atcgaaccgt tcggcaccgg cttcgatctt agcgactcga
      961 tcgcgcaggc gcgtgagcaa tttaaagaag gtgaaacgcg tcgtgtcgcc ggccgcatca
     1021 ccgcgcatcg cgacatgggc aaaagtcact ttctcgatct gcgtgacgta accggtcgca
     1081 ttcaaattta tattcacgca aaggagattg gtccggaatt gttcgagctt tttcgtttgc
     1141 tggacatagg cgatttcatt ggcgtcgaag ggacatgttt tatcaccaaa agcggcgaac
     1201 cgacagtaaa agtccaaaca ttccagttgc tcgccaaggc attgcggccg ctcccggaaa
     1261 aatggcatgg actgcaggac atcgaagcgc gttacagaca gcgttatctt gatcttctca
     1321 ccaatgaacg ttcgcgcgct gtgttcgaaa aacggatcgc catcgttcgc gaaacccggc
     1381 gctttttcga ggaccggggc tttgtcgaag tggagacgcc aattttgcaa gcaacggctg
     1441 gaggtgcggc ggccgaaccg ttcaaaacac accacaacgc acttggcatc gatctctatc
     1501 tgcgcattgc gctggagctt tatctgaaac gtctgctggt ggccggcttc aacaaggtat
     1561 tcgaaatcaa tcgcaacttt cgcaacgaag gcatctccag gaagcacaat ccggaattca
     1621 caatgctgga agcctattgg gcctatgccg atttcgagaa gatcgcaaat ctcgtcgaag
     1681 aactgatctg ttatctcgcc gagaaaatct gcggttcgct caccatcgag catcgagacg
     1741 ctaatggaaa tgttacgcgc acgatcaatt tgaaacggcc gtggcggcgc gttcgttacc
     1801 gcgatttgat gcgcgaagtc gcgggcaagg attggtttga gctctcgccc gaggagcggc
     1861 gcggacgcgc catgaatgag ttcaagctcg agattctgcc gcagctcgcg gacttcgagg
     1921 tgacgcagca tgtgttcgag aaactcatcg aagaaaaaac aatggatcct ctgttcgtca
     1981 cgcattgtcc gaaagaactc gtaccgctgg ccaaacaaaa cgcggaagac agctcggtcg
     2041 tcgacgtttt tgaactgatc atcaacggtg tggagatcgc gccaggctac agcgagctga
     2101 atgacccgct tgtgcaacgt cagcgtctgc tcgaacaggc gggcgaagag aagcaaaaca
     2161 tcgacgagga atttctgctc gctcttgagt acggtatgcc gccggctggt ggctttggaa
     2221 tcgggataga caggctcacc atgttgctta ccggcgccga atccatccgc gacgtaattc
     2281 tgttcccttt gctacgaccc aagaaataat cacggtttct gtaggtcgtt tctgtgaaac
     2341 gccaggccaa ctgatgccaa ggttcggcgt ctgacacaga cgccctacaa cgcctttcaa
     2401 catcgttccc gttcgcacgg cgaactggag accgccgctt cttgttctat cattcgcgaa
     2461 tgcggcgaat aatttcattg ctgtttctaa tcgtctgctc gtctgccgca gcggtcgtac
     2521 ccgcgaaacc cgagcgtcat gtagtggtgg ttgtgtggga cgggatgcgt ccggattttg
     2581 tgaccgaaca gaatactccg acgctttgga agctcgcgcg cgaaggcatc acttttcgaa
     2641 accatcatgc ggtatatccg agtgccacta tggtaaatgg cacggccata gtgaccggaa
     2701 cttatcccgg caagagcggt atcattgcga accatgtcta tcggccggac atcgatcctc
     2761 accactcaat tgacgtcgag ctgccggcag tagtgaagaa aggggatgaa gtgtccggtg
     2821 ggaaatacat tttggttcca acgattgccg agctagtcca gcacgcagga gggcgcacgg
     2881 taattgcttc tgcaaaaact gtcgggcttt tgctggaccg acaggccgac gttgggactg
     2941 cgaaaaattg cgtcacgctg ttcgcgggca agtcgctccc ggcggagatt atcccttcca
     3001 ttactgcaac gcttggtccc tttccatctg gccacctgca acaggacgcc tggacaacaa
     3061 aagcgatgac cgattgtttt tggaaagacg gtgtgccggc cctttccgtg ctttggttag
     3121 gcgaaccgga tcttacacaa catgaatccg caccgggagc gccggcggcg ctcgctgcga
     3181 tcaagtccgc tgatgaaaac ctcgc
//
LOCUS       DATDAJ010000243         2787 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1386647, whole genome shotgun sequence.
ACCESSION   DATDAJ010000243 DATDAJ010000000
VERSION     DATDAJ010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386647"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1094
                     /locus_tag="VIS53_06080"
     CDS             <1..1094
                     /locus_tag="VIS53_06080"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY5767385.1"
                     /translation="CYGVIGIMKNGDGPKVVVRTDMDALSVGEETGLPYASKVVVKNA
                     EGKDVSVMHACGHDAHISMFIGVARSLAKLKDQWHGTIIFVAQPAEETGSGARALLKA
                     GLYEQFGKPDFALGFHDKADMQTGHIGVTEGYTYANVDSVDVTVRGVGGHGAYPYTTK
                     DPIVLAAEMINAWQTIASRENNPLNPIVITIGSIHGGTKHNIIPDEVKMQLTVRTYKP
                     DVRERVLAAIDRIAKGIAMAGGVPPERAPVVNVLKGEFTPATYNNPELTKRLVAVWKK
                     SLGTENVEIVDPTMGGEDFSEYSLPDHSIPAVNFHVGAVAPEKIAESKKTETPLPSLH
                     SSKFAPVPEPTIRTGVIAMTTAVLELMKK"
     gene            complement(1197..2627)
                     /locus_tag="VIS53_06085"
     CDS             complement(1197..2627)
                     /locus_tag="VIS53_06085"
                     /inference="COORDINATES: protein motif:HMM:NF012320.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY5767386.1"
                     /translation="MIQLNKNYSLPERLAEFIPIKIVSVGGAGLNALDRIVLDGLERA
                     DVVAINTDVNSLTSSVATRKVQLGRSVSRGLGAGGDPDVGYQAALESADEIREALADA
                     SVIFICAGLGGGTGSGAAPYIAQAAREAGALVIAFATLPFGFEGKRRNVQAREALARL
                     SEFAHAVVCFENDRMGDLSPPQAGIHQAFAMADITISQSVRSIVNLIQQPGLIRIGFD
                     DLLAALNTRNSRCLFGYGESDSDNRAHEALTQALKNPLMDRGRMLADAMYVLVQVAGG
                     PGMTLSEVEILMQELGRHVSDQTQILFGVAVDARLGDRLSVTVISSLSAEDETDLLQA
                     PPAASSAAAVSPVREQYEPAGPESEIQSKESTVEVPSLEETIPFEEPVAAEVTPIATS
                     LPTEPPAVSARNGEPEPAMSTPQEKSVPWKEEKAAAEKSATPAKQEVLQFEPVTRGRF
                     EKSEPTIIEGEDLDVPTYLRKHIKVK"
BASE COUNT          628 a          747 c          772 g          640 t
ORIGIN      
        1 aatgttacgg cgtaatcggg atcatgaaaa acggggacgg tccgaaggtt gtggtgcgca
       61 cagacatgga cgctttgtct gttggagagg aaaccggcct gccgtacgcc agcaaggtcg
      121 tggtgaagaa cgctgaaggc aaagacgtgt ccgtcatgca tgcgtgcggg catgacgcac
      181 atatatccat gtttatcggc gtagcgcgct cgctggcgaa actgaaggat caatggcatg
      241 gcacgatcat ctttgtcgca caaccggcag aggaaactgg cagcggcgcc cgggcattac
      301 tcaaggctgg tctttacgaa caattcggta aaccggattt cgcccttgga tttcatgaca
      361 aggcagacat gcaaaccggc cacatcgggg tcacggaagg ttacacatat gcgaacgtcg
      421 attcagttga tgtgaccgtg cggggcgtcg gcgggcacgg cgcatacccg tatactacca
      481 aggaccccat cgtgcttgcg gcggagatga tcaacgcgtg gcaaacgatt gcctcgcgtg
      541 aaaataatcc gctcaatccg attgtcatca ccatcggctc gattcatgga ggcacaaagc
      601 acaacatcat tccagatgag gtgaaaatgc agttaacggt gcgcacgtat aagcctgatg
      661 tgcgtgagcg cgtgctggct gcaattgatc gtatcgcaaa agggatcgcc atggcaggcg
      721 gcgtaccgcc cgaacgcgca ccggtcgtaa atgttttaaa aggcgaattc acgcctgcga
      781 cttacaacaa tccggaacta accaaacggc tcgttgctgt ctggaaaaag tcgttaggca
      841 cagaaaatgt ggagattgta gatccgacaa tgggcggcga agatttttcc gaatacagct
      901 tgccagacca ttccattccc gcggttaatt ttcacgtcgg cgcggtggcg ccggaaaaaa
      961 tcgccgaaag caaaaagacc gaaacaccgc tgccgagtct gcattccagc aaatttgcgc
     1021 ccgttcccga gccgaccatt cgcacgggcg ttatcgcaat gacgacggcc gtgctggaac
     1081 tgatgaagaa gtaggcaaag ccgaggtcat tcgttaaatg gttgaactgt tgaaccgtgg
     1141 aaatgcggat ccgaagttac ggtttaagga tttaacgttt caaccgctgc gacgcgtcac
     1201 tttaccttga tatgtttgcg gaggtacgtc ggcacatcga ggtcttcgcc ttcgatgatt
     1261 gtcggttcgc ttttttcaaa acgaccgcgt gtcacgggtt caaattgcag gacttcctgc
     1321 ttagccggcg tcgctgattt ttcagcggcc gctttctctt ccttccatgg gactgatttc
     1381 tcctgaggcg tgctcatggc gggctcgggc tcgccgttac gagccgatac agcgggcggt
     1441 tcggtgggga gggatgttgc gattggtgtc acttcagccg cgacaggttc ttcgaatgga
     1501 atcgtttcct cgagagatgg cacttcgacc gtcgattctt tagactgaat ttcagattcc
     1561 ggtcctgcgg gttcgtattg ttctcgaact ggagacactg cggcggcact gctcgccgcg
     1621 ggaggcgctt gcagcaaatc tgtttcgtct tctgccgaaa gcgagctgat gacggtgacg
     1681 ctcaaccggt ctcccagccg tgcgtccacg gctacaccga agaggatttg cgtttggtcg
     1741 ctgacgtgac gtccgagttc ctgcatcagg atttcgactt cggacagagt catgccgggg
     1801 cctccagcta cctgtacgag cacgtacatt gcgtctgcca gcattcgtcc acgatccatc
     1861 aagggattct tgagcgcctg cgtgagggct tcatgtgcgc gattgtccga atcggattcg
     1921 ccgtagccaa acaggcaacg gctgttgcgt gtgttcaaag ctgcgagcaa atcatcgaag
     1981 ccgatacgta tgagtcccgg ctgctgaatc aggttcacaa tcgatcgcac gctttggctg
     2041 atggtgatat ccgccattgc gaacgcttga tgaattcccg cctgcggcgg actcagatcg
     2101 cccattcgat cattctcgaa acagactacc gcatgggcaa actcgctaag ccgcgccagt
     2161 gcctcgcgcg cctgcacatt gcggcgtttg ccttcaaatc caaatggaag agtcgcaaaa
     2221 gcaatgacca gcgctccggc ttcacgggct gcttgtgcaa tatacggcgc ggctcccgac
     2281 cccgtgcctc caccgagtcc tgcacaaatg aaaattacac tcgcatcagc cagggcttcg
     2341 cgaatctcgt cggccgattc caaggctgct tgatagccga catccgggtc gccgcccgca
     2401 cccaaaccac gtgagacact acgacccagc tgcactttgc gcgtcgcaac tgaactcgtc
     2461 agtgagttga catcagtatt gatggcgaca acatcggctc tctccaatcc gtcaagcacg
     2521 atgcggtcga gcgcgtttaa acccgctcca cccacgctga cgattttgat cggaataaac
     2581 tctgccaaac gttctggaag actgtagttt ttgttaagct gaatcatatt tggtcaccaa
     2641 tttggatagt gtcatgttga gcgaagcgaa acatctcttg atttgcgtgt tagtaaccgg
     2701 aacaagccag agatccttcg ctcaggatga caactgcgtt gttgggtgtt gtcgtttgag
     2761 tacttcctct tcatcgtttt ccggtga
//
LOCUS       DATDAJ010000244        14353 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1392930, whole genome shotgun sequence.
ACCESSION   DATDAJ010000244 DATDAJ010000000
VERSION     DATDAJ010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 14353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14353
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392930"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..402)
                     /locus_tag="VIS53_06090"
     CDS             complement(<1..402)
                     /locus_tag="VIS53_06090"
                     /inference="COORDINATES: protein motif:HMM:NF012320.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767387.1"
                     /translation="MAGLLEEFSPENDENKNKFGCSATAEARCKPSIPDGPEVRPYPM
                     IQLNKNYSLPERLAEFIPIKIVSVGGAGLNALDRIVLDGLERADVVAINTDVNSLTSS
                     VATRKVQLGRSVSRGLGAGGDPDVGYQAALES"
     gene            complement(362..1570)
                     /gene="ftsA"
                     /locus_tag="VIS53_06095"
     CDS             complement(362..1570)
                     /gene="ftsA"
                     /locus_tag="VIS53_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEY5767388.1"
                     /translation="MRNNSLMVGLEVGTSKICVVVGESRPDGTLKILGVGQAPSRGVR
                     KGEIVDFETAMKCAHEAVVDAEQKSDVMIKSVYVAIAGSHLQSFNNRGCVMLPEDRDE
                     IDEQDVADVKINAREVSIPAQNAFLHSIIQHYQVDGQQGVLNPAGMFGQKLEADFHII
                     HGVRTRIQNTIRCVKELPLDVDDVVFSGLASAQVVLTQQEKDLGALVIDIGGGTTDYV
                     LYSEGAVRQSGCLAVGGDHITNDISMGLRIPMARAEKLKIEEGGCVLGNCLPGEMILL
                     KDDSGFAGKEIERETLNTIIHLRVREAFELLKRRLDEEPYLGYLGAGIFITGGCSLLS
                     GIDHLASEIFEIPANLTHAQAAWGVTSAVENPQFSTAIGLVKFAQVMHTDRPARGLGR
                     FIGRIFTGKR"
     gene            complement(1574..2539)
                     /locus_tag="VIS53_06100"
     CDS             complement(1574..2539)
                     /locus_tag="VIS53_06100"
                     /inference="COORDINATES: protein motif:HMM:NF020067.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HEY5767389.1"
                     /translation="MGVLWKLALFVILCVAGYAGARAAVKRLVFENPDYHVQTIELQT
                     DGTLQREQVLKAADLHEGANIFSVNLASVRDRIQQLPQADEVEVVRKLPSEIDIRIVE
                     RKPVAWITSETEINDPFASDAAFLVGARGVLMKQKKLLPEYLGLPLIVGCSSEPLEAG
                     KIVESPEVKIALDLLRLTESTFLQMRFQIREIDISKSYCLLVTDKNRSRVMFGLNDLE
                     GQLRRLQVFLDYCDNTKQELETLNLVAQRNIPVTFTSPASDVINDTLEPAVEPRIMKA
                     IPVHAQENRTHQDSAKQATGSSVSKSRTASAPPPKAIRNQQKKAE"
     gene            complement(2668..3633)
                     /locus_tag="VIS53_06105"
     CDS             complement(2668..3633)
                     /locus_tag="VIS53_06105"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY5767390.1"
                     /translation="MTTHEELPKKIAVLMGGPGSEREVSLATGRGVAKALRSLGVEVV
                     EIDVRDENFQLPNDVDLAFNTIHGTFGEDGHLQKILEGRGVAYTGEDAVGSEIAFDKI
                     RTKEKFQEHDVTTPPWEVIHAGQRPTIPLPIVVKAPRQGSTVGVVIVKNERDLEAAIG
                     EAAKYGRELLIEKFVAGRELTIGILGDQALPILEIIPKGGFYDFNNKYPFLNPQGGGG
                     AEHVCPAKVDAGKTKEIQELALRAFRSAGLQVYARVDAILSDNGQPYILEINTIPGMT
                     EASLLPEAAAAAGIGYPDLCARIIALSRLRQSSSGQARAGTEGKR"
     gene            complement(3630..5984)
                     /gene="murC"
                     /locus_tag="VIS53_06110"
     CDS             complement(3630..5984)
                     /gene="murC"
                     /locus_tag="VIS53_06110"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEY5767391.1"
                     /translation="MKLTSEATAARADSPRKQFRRRDPLPDLSRFLTAEQHRIHLVGV
                     AGSGMSGLAGLLIELGHAVSGSDKVTTTETERLQRLGLRFHEQHLAEHADAAELVVFS
                     SAIKDDNPILLTARSCGKSLFRRAEAVAAIMQAKRGIVIAGMHGKTTTSAMTAYVLRE
                     GGLHPSHYVGAEIPILGTNAYWDHRGKYFVAEGDESDGTLRCFYPEHAVILNIEEEHL
                     DFYPDLAAIEKVFAQLIDQTSGSVLYNIDDPNTARLCGNRKRAVSYGFSEQADYRGAD
                     VELRNFGSSFLVVRRGEKLGQATLNVPGEHNVHNALGVIALASELSIPFDKITASLRK
                     FEHARRRFEIKYASDRFLLVDDYAHHPTEIRATLRAAKSIGRRRLVTMFQPHRFSRTK
                     ALCREFGSAFDDADRVMITDVYPASEPPIPGITGQTIVDEIVRHAHRGVTYQARLQSV
                     HRDVGNMLEAGDLVLSLGAGNIHEQLEILAADLVIAEKLKAIVGEEGEVRLHEPLSNH
                     TTLRVGGPAQFWIEPRTEQSFAELIRFCHDEHLPLFIMGRGSNLLVRDGGIRGVVVHP
                     RGGDFEKIEVNGCEITAGAGVKLRQVAYAARAANVGGLEWMEGIPGTVGGGLRMNAGA
                     MGAQTFEHVTRIRYLDADGNTHVKNRNELEVFYRRFPLLEKNFAVSATFRGQPAERAE
                     IDARLRESQEKRRTTQPVAKSAGCIFKNPTTIPAGKLVDELGLKNSRVGNARVSRVHG
                     NFIVNDGNATASEVLELIDDIKRVARKKRGIELETEVEIVGEPE"
     gene            complement(5968..7065)
                     /gene="murG"
                     /locus_tag="VIS53_06115"
     CDS             complement(5968..7065)
                     /gene="murG"
                     /locus_tag="VIS53_06115"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:TIGR01133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEY5767392.1"
                     /translation="MNAVIACGGTGGHLFPGIAVAEVLQNRGHAVMLLVSEKDIDAVA
                     LSGRTNFQVEKLPTVGLPSPFSPALFGFSRRFVESLSLCRSIYRKFNPHAVLGMGGFT
                     STAPVLAARFRGIATFIHESNAVPGKANRWTARVVNTVMLGFKECAPFFPKTHTEVTG
                     TPVRTELVRLDRADSRRKLGLREDIPTLLVMGGSQGASGINQALIKALPFLQGVPLQV
                     IHLSGARDERLVADNYRRENVPAYIGAFHHQMEEVYSAADLVVARAGAASLAEFAGFS
                     LPGILIPFPYAADDHQTRNAEIYARADAAILLEQADLSGELLARNIRELVENPQRLQQ
                     MAANCARLAPNDAAGRVASAIEKYTTHEAHV"
     gene            complement(7092..8234)
                     /gene="ftsW"
                     /locus_tag="VIS53_06120"
     CDS             complement(7092..8234)
                     /gene="ftsW"
                     /locus_tag="VIS53_06120"
                     /inference="COORDINATES: protein motif:HMM:TIGR02614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEY5767393.1"
                     /translation="MRRKSAYILFLAVLGLLVIGIVMLFSTSAYARDSHGDVYFFIKR
                     QAIWIGIGLVACIFAALVNYQFWQKTWWLWFAVALAALALCYIPHIGMRINGSRRWVG
                     YGPITFQPSELAKIATIFFLAAWFARREKPDGNVLSGFIIPLAVISAPVALVLGEVDL
                     GTTALIGTMAFVVMFIAGTNPLLLGGVAVAGLGGLLIVATQISERMGRLSAFLHPQNY
                     KDDAGLQQMQALIAWGSGGMDGLGLGNGRQKMLYLPYAHTDFIFPIIGEELGLRFSLL
                     VVFLFVVIIVCGIMIALHARDRFGLLLGGGIVSLLALQAAVNIGVTTSLLPNKGLPLP
                     FISYGGSNLAACMFGIGVLVNIYRQGILEPPPAKRATMNAKLALRI"
     gene            complement(8224..8979)
                     /locus_tag="VIS53_06125"
     CDS             complement(8224..8979)
                     /locus_tag="VIS53_06125"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY5767394.1"
                     /translation="MKRIKIPRLFKAKKLSAATARRASAASAGMEFEGIPEPNMKLSR
                     ALLIVLLLHVVAVSGIIAFNAIKTRERAFVPQASIETENKPVYAAQTANHTTSEKARA
                     AVAQKENDRPHDPKPSHSPAKDEQAKTPSSSGKTYVVKKGDNPVGIAKKLKVSYNDLI
                     ALNHIDDPRKLKIGQKLLVPEAAKPKSSSSKATDKKKKQNEISSEKSDAKTHRTPKAL
                     RAKSTDTRASFRASFWSAHASSRRFHAMTPHAS"
     gene            complement(8976..10310)
                     /gene="murD"
                     /locus_tag="VIS53_06130"
     CDS             complement(8976..10310)
                     /gene="murD"
                     /locus_tag="VIS53_06130"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEY5767395.1"
                     /translation="MNNGRYKNQNVAVLGAGLSGSAAALLLASQGAQVTVLDSAGENN
                     LLKSTLDNLREHGVRVLCGSEAERDSSVYDWMVLSPGIDPISPLARNFSSRGIETISE
                     LELGWRSCEMPVIAVTGTNGKTTTTELLAQMLNACGQRTIACGNIGRPLSEVARENQP
                     LDVLTVEVSSFQLEAIRAFRPSISLWLNFAPDHLDRYRSVAEYRAAKLRIFENQTEQD
                     VAVVNAAEALPAIRPSRITFSAYSNRADFRLADGAIVYENQPVLRLVDTKLPGLHNIE
                     NLMATLAVGVVRGLSFAQMVPAVRDYEPRPHRCEFVRELAGVEYVNDSKATNLDAVEK
                     ALAAQTKPVVLIAGGKEKGFTFDPLRSLVEDKVKSAVLIGEMAGSIRRSWDGAVKSEI
                     ATSLADAVERARSLASAGDVILFSPGTSSFDMFKSYADRGDQFRKLVQTLPQ"
     gene            complement(10307..11407)
                     /gene="mraY"
                     /locus_tag="VIS53_06135"
     CDS             complement(10307..11407)
                     /gene="mraY"
                     /locus_tag="VIS53_06135"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEY5767396.1"
                     /translation="MMYYLHHLSGHFIGFNVFLYVTFRAIAAAVTAFLTTLIFGNFII
                     AKLRALKVEQPIRGAAEVHRLAELQGVKQGTPTMGGVLVIAAVFVSSILWARLDNKFV
                     WLALCSMVYLGGLGFADDYLKVTKKKSEGIPGRIKLAFQIILAAVITGIFLTDPLLEV
                     QARTLYVPFFKTPVIANMSWFTFVFFLLVIVGTSNAVNLTDGLDGLATGCTITVAFAY
                     ALLCYAAGNFRVAEYLQVPFYPFAGELTVVCSALIGAGLGFLWFNCYPAKVFMGDTGS
                     LAIGGMIGVVAICCKQELLLAVVGGVFVIEAVSVIVQVLSFKLTGKRFFVMSPLHHHF
                     ELTGWKETTVIVRFWILSIIFALLGLATLKLR"
     gene            complement(11404..12798)
                     /gene="murF"
                     /locus_tag="VIS53_06140"
     CDS             complement(11404..12798)
                     /gene="murF"
                     /locus_tag="VIS53_06140"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEY5767397.1"
                     /translation="MNPLTVSQIAQFAGASLSSGDGTVVVNKVSTDSRTIKPGELFVA
                     LRGENFEGHDFIEASAKAGATGALVDLNWAGNVPNNFVLLRASDTLQAYQMLAANYRQ
                     SLALKVVAITGSNGKTSTKDFAASVLARKFRVTKTEGNFNNHVGLPRTILEATSEDEV
                     GVWEIGMNHPGEIAALSKIAAPDAAIITNIGVAHIEFMGSREAIATEKGALAEAVEPQ
                     GTVILNADDPFTEAIAARTRAKVVFAGTTGGAVRAIEIRQSAEGSEFTIVESAHRCRA
                     QLPVAGSHMVQNALLAVAAGRAFGLSIEECAAGLAAAPLTKARLQIKEIGGVQFLDDS
                     YNANPDSMKAALRTLVELDTEGKRIAVLGEMRELGIESERGHREIGETAATLGVDQLI
                     TIGDAAELIAEGARTAGLDKVLSARSTSEAARLLGEIAEPGDLVLIKGSRAARTEEVI
                     EQFGSQNSVFVTSP"
     gene            complement(12801..14279)
                     /locus_tag="VIS53_06145"
     CDS             complement(12801..14279)
                     /locus_tag="VIS53_06145"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY5767398.1"
                     /translation="MQLKTLLATTPVRQVLGSVDRPVENIAYDSRRVQRHTMFVALRG
                     EKTDGHQFIGQAIDKGASVIVAESEQKDPRVTCLLVENTRTALADFSATFYGHPARKL
                     KLAAVTGTNGKTTTTFLIKHICENAGLRCGLIGTVRYEIGERILPAIRTTPESLDLQE
                     LLAQIANAGCKAAAMEVSSHALAQGRTRGIEWNVAVFTNLTQDHLDFHGTMENYFAAK
                     AKLFTELDGQKQKTKPVAIVNVDDRYGQQLLGRLDKNVAVITCGMGARADFRASNYRA
                     EFTGTSYQLDARGKSYLVRLPLIGRFNVANSIAALAAAEMLGINLRSAVLNLGKAPQV
                     PGRLELVPAKRQFQVFVDYAHTPDALANVLKTLRELQPNRLITVFGCGGDRDRQKRPL
                     MAEMADRLADYSIITSDNPRKEDPSAIIDETEKGFRSKHYEKIVDRTEAINRAVALAG
                     PRDIVLVAGKGHENYQEFADYTIPFDDIQVARRAIEDHPVEL"
BASE COUNT         3100 a         4110 c         3842 g         3301 t
ORIGIN      
        1 cgattccaag gctgcttgat agccgacatc cgggtcgccg cccgcaccca aaccacgtga
       61 gacactacga cccagctgca ctttgcgcgt cgcaactgaa ctcgtcagtg agtttacatc
      121 agtattgatg gcgaccacat cggctctctc caatccgtca agcacgatgc ggtcgagcgc
      181 gtttaaaccc gctccaccca cgctaacgat tttgatcgga ataaactctg ccaaacgttc
      241 tggaagactg tagtttttgt taagctgaat catagggtag ggacggacct ccgggccgtc
      301 cgggatcgag ggtttgcagc gcgcctcggc ggtcgcgcta cacccgaact tgtttttgtt
      361 ctcatcgttt tccggtgaaa attcttccaa taaaccggcc aagtcctcgt gccggtcggt
      421 cggtgtgcat cacttgcgcg aacttgacca agccaatcgc agtagagaac tggggatttt
      481 ctaccgcgga tgtcacaccc caagctgcct gcgcgtgcgt caggttggcc ggtatttcga
      541 aaatctccga cgccagatga tcgattccgc tcagaagact gcagccgccg gtgatgaaaa
      601 tgccggcgcc cagatagccg agatacggtt cctcgtcgag tctgcgtttg agcaactcaa
      661 acgcttcgcg gacgcgcaga tgaatgatgg tgttcagcgt ttcgcgctcg atttcttttc
      721 ctgcaaaccc ggaatcgtcc ttcagcaaaa tcatttcgcc cggcaagcaa tttccgagaa
      781 cgcagccgcc ctcttcgatt tttaatttct ccgcgcgcgc catcgggatg cgcagaccca
      841 tggagatatc attggtgatg tggtcgccgc cgacagcgag acaaccgctt tgtcgcaccg
      901 caccttcaga gtacaacacg taatcagtcg ttcctccgcc gatatcgatc accagcgcac
      961 cgagatcctt ttcctgttga gtcagcacaa cctgcgccga agccagaccg ctaaaaacca
     1021 catcatccac atccagtggc agttctttca cgcatcgaat ggtgttttga atccgtgtgc
     1081 gcacgccgtg aataatgtgg aaatcggctt ccagtttttg cccgaacatg ccggctgggt
     1141 ttagcacgcc ctgttgtcca tcgacctgat aatgttgaat gatagaatgc aggaacgcgt
     1201 tttgggcagg aatgctcact tcgcgcgcgt taatttttac gtccgccaca tcctgctcat
     1261 caatttcgtc gcggtcttct ggcagcatga cgcatccgcg attgttaaaa ctctgcaagt
     1321 gcgagccggc gatagcgacg taaacactct taatcatcac gtcgcttttc tgttcggcat
     1381 cgacaactgc ttcgtgcgcg catttcattg ccgtttcaaa atcaacaatc tcgcccttac
     1441 gtacgccgcg cgatggcgcc tggcctacac ccaggatttt aagcgttcca tcaggtcggc
     1501 tttctccgac gaccacgcag atcttggacg tcccaacctc gagaccgacc atcaaactat
     1561 tgttccgcat ttgttattcg gctttctttt gttggttacg aattgccttg ggaggaggcg
     1621 cagaagcagt acgtgatttt gacactgagg atccagttgc ttgtttggcg gaatcctggt
     1681 gagtccggtt ttcctgcgcg tgcaccggga tcgctttcat gatccgcggc tcgacagccg
     1741 gttccagtgt gtcgttgatt acatccgacg ccggactggt gaacgttacg ggaatattgc
     1801 gttgcgcgac gaggttcaac gtttccagct cctgtttggt gttatcacag taatcaagga
     1861 agacctgcag tcgccgcagt tgcccttcga gatcgttcaa accaaacatg acgcgactgc
     1921 gatttttgtc ggtcaccagg aggcaatagc ttttcgaaat atcgatctcg cgaatctgaa
     1981 accgcatttg caaaaaagtg ctctcggtga gacgaagcaa gtcgagcgct atctttactt
     2041 ctggcgattc gacaattttc cccgcttcga gcggttcgct cgagcatcct acgatcagcg
     2101 gcagtcccag atattcgggc aacaattttt tttgtttcat taaaaccccc cgggcgccta
     2161 ctaaaaaggc ggcatccgac gcaaatggat cgttaatttc cgtttcgctg gtgatccagg
     2221 cgaccggttt tcgttccaca atgcgaatgt cgatttcgct gggtaatttt cgcacgacct
     2281 cgacttcgtc agcttgcgga agctgctgta tgcgatcgcg cacgcttgcc aggttcacgc
     2341 tgaagatatt tgcgccttcg tgcagatcgg ctgcctttag cacctgctcc cgctggagcg
     2401 tgccgtcggt ctgcaattca attgtttgaa cgtgataatc tggattctcg aagacaaggc
     2461 gttttacagc tgcgcgcgca cctgcgtagc cggctacgca caaaatcacg aacaaagcca
     2521 acttccaaag cactcccatc gcgctgcgaa tacggtgctg ggttgccctg cgggaacgga
     2581 cttttacatc gagcaggtgt tgctgtcgac gttgccgcac attggacagt cgccgattgc
     2641 gcgttcggga agttctttcg cgaaaactca tcgtttgcct tctgttccgg cccgcgcctg
     2701 cccgctcgag ctttggcgaa ggcgcgaaag cgcaatgatc cgcgcgcaaa gatcagggta
     2761 accaataccc gctgctgcag ccgcctcggg cagcaggcta gcctcggtca tgccgggaat
     2821 cgtgttgatc tctaaaatgt acggctgtcc gttgtcggat agaattgcgt ccacacgcgc
     2881 gtacacctgc agaccggctg agcgaaacgc gcggagcgcc agttcctgga tttcttttgt
     2941 ttttcccgcg tcgacttttg ccggacaaac gtgctccgct ccgccgccgc cttgcgggtt
     3001 gagaaacgga tacttgttgt tgaaatcgta aaacccgccc ttgggaatta tttcgagaat
     3061 gggcagagcc tgatcaccga gaatgcctat cgtcagttcc cggccagcta caaatttttc
     3121 tatcaataat tcgcgaccat acttcgccgc ttccccgatc gcggcttcga ggtcgcgttc
     3181 gttcttcaca atgacaacgc ccacggttga gccttgtcgt ggcgccttga cgacaatcgg
     3241 caatggaatc gtcggacgct gtccggcgtg gatcacttcc catggtggtg tcgttacgtc
     3301 atgttcctga aatttttctt tggtgcgaat cttgtcgaag gcgatctcgc tgccaacggc
     3361 atcttcgccg gtataagcga cgccgcggcc ctcaagaatt ttctgaaggt ggccatcttc
     3421 gccaaaggtt ccgtggatcg tattaaacgc cagatcgaca tcgttcggca gttggaagtt
     3481 ttcgtcgcgc acatcgattt ccaccacttc aacgcctaac gaccgaagcg ctttcgccac
     3541 acctcgcccg gtcgcaagcg aaacctctcg ctccgatccc ggccctccca tgagcacagc
     3601 aattttcttt ggtaactcct cgtgtgttgt cattccggtt ctcccacgat ttccacttcg
     3661 gtctccaact cgattccccg ctttttcctc gcgactctct tgatgtcatc aatcaactca
     3721 agaacttccg atgccgttgc attgccatcg ttcacgataa agttgccgtg tacccgcgac
     3781 acgcgcgcat ttccgacgcg cgagttcttc agccctagtt cgtcgaccaa tttgcccgct
     3841 ggaatggtgg taggattttt gaaaatgcag cctgcgcttt tggcgaccgg ctgcgtcgtg
     3901 cgccgtttct cctgcgattc gcgcaaacgt gcatcgattt ctgcgcgctc ggcaggttgc
     3961 ccgcggaacg ttgcagaaac tgcaaagttt ttttcgagca atgggaaccg ccgataaaaa
     4021 acttccaact cattgcgatt cttcacgtgc gtgtttccgt cggcatcaag ataacgaatg
     4081 cgcgttacgt gctcgaaagt ttgcgcgccc atcgcgccgg cattcatgcg caatcctcct
     4141 ccgactgtgc ctggaattcc ctccatccat tcgagtccgc caacatttgc cgcacgcgcg
     4201 gcgtaagcta cctgtctcaa ctttacgcct gcgcctgccg tgatctcgca cccgttcacc
     4261 tcgattttct cgaaatcgcc gccccgcgga tgaacgacca ctccacgaat gccgccatcc
     4321 cgaacgagaa gattcgaacc tcgccccata atgaacagcg gcagatgttc atcgtggcaa
     4381 aagcgaatta gttccgcgaa gctctgttcg gtgcgcggtt cgatccaaaa ctgcgcggga
     4441 ccgccaacgc gcagcgtcgt atgattcgac aacggctcgt gaaggcggac ctcaccctct
     4501 tcgcccacaa tagcctttag tttctcggcg atgacgagat cggcggcgag gatctccaat
     4561 tgttcgtgga tgttgccggc gccgagactt aaaacaagat cgccggcctc cagcatgttt
     4621 cccacgtcac gatgcaccga ctgcagacgt gcctgataag tgactccgcg gtgtgcgtgt
     4681 cgcacgattt catcgacgat agtctgacct gtgattccgg gaatcggggg ctcgctggca
     4741 ggatacacat ccgtgatcat aacccggtcc gcatcgtcga aggcgctgcc aaattcgcgg
     4801 cacagcgctt ttgttcgtga aaaacggtgc ggctgaaaca tcgtgacgag acgccgccgt
     4861 cctatcgatt tcgctgcgcg aagtgtggca cgaatttccg tcggatgatg agcataatcg
     4921 tcgacgagca gaaacctgtc gctcgcgtat ttgatctcga accggcggcg cgcgtgctcg
     4981 aatttccgaa gcgatgccgt gatcttgtcg aacggaatag aaagctcgga agccagtgcg
     5041 attactccaa gcgcgttatg cacgttgtgt tctccgggaa cattgagagt tgcttgcccg
     5101 agtttctcgc cgcggcgaac aactaaaaag gatgaaccaa aattccgcag ttcgacgtcg
     5161 gctccacggt aatccgcctg ctcggaaaat ccgtatgaga ctgcgcgttt gcgattgccg
     5221 cacaatcgcg cggtgttcgg atcatcaatg ttgtagagaa cgcttccgct ggtttgatcg
     5281 atcagttgcg caaagacttt ttcgatggcc gcgaggtcgg gatagaaatc gaggtgttct
     5341 tcctcgatgt ttagaatgac tgcgtgctcg ggataaaagc agcgcaacgt gccgtcgctt
     5401 tcgtcacctt cggcaacgaa atacttgccg cggtgatccc aatacgcgtt cgttccgaga
     5461 attggaattt cagcgcccac atagtgcgac ggatgcagtc cgccttcacg aagcacatat
     5521 gctgtcattg cagaagtggt tgttttgcca tgcattccgg cgatcacaat gccgcgcttg
     5581 gcctgcatga ttgcagcgac ggcttccgcg cgacggaaca gcgactttcc gcaactacgc
     5641 gcagtgagga gaattggatt gtcgtcctta attgcggagg aaaacacaac aagctccgcg
     5701 gcgtcagcat gctcggcgag atgctgttca tgaaagcgca gaccgagccg ttgcagtcgc
     5761 tcggtctcgg tcgttgtaac cttgtcggag ccgctcactg cgtgtcctag ctcgatcaga
     5821 agcccggcaa gaccgctcat accgcttccc gcaacaccaa caaggtgaat ccgatgctgt
     5881 tcggcggtca gaaatcgcga caggtctggc aatggatcac gacgccgaaa ttgtttgcgc
     5941 ggagaatcgg cgcgcgcggc agttgcttca gacgtgagct tcatgagtcg tatatttttc
     6001 aatcgcgcta gccacgcgac cagctgcatc attcggcgcg agacgcgcac aattcgctgc
     6061 catttgctgc agccgttgcg ggttttccac cagctcgcgg atgttgcgcg cgagcaattc
     6121 accagagaga tccgcctgct ccagaagaat tgccgcatca gcgcgagcat agatctctgc
     6181 attgcgtgtt tggtgatcat ccgcggcgta cggaaatgga atcaggatgc cgggcagcga
     6241 aaagccggcg aactccgcca ggctggccgc gcccgctcgc gcaacgacaa gatcagcggc
     6301 gctgtaaact tcctccatct gatgatgaaa cgcaccgatg taagcaggga cgttttcccg
     6361 gcgatagttg tctgcaacga ggcgttcgtc ccgcgccccg gacaggtgga tcacctggag
     6421 cggcacacct tgcaaaaacg gcagcgcttt gattagcgcc tggttgattc cgctggcgcc
     6481 ctggctgccg cccatcacca gcagtgtggg tatgtcctct cgcaatccga gtttccgccg
     6541 cgaatctgcg cggtccagac gcaccagttc ggtgcgaacc ggtgtgccag tcacttcggt
     6601 atgcgttttc ggaaaaaatg gtgcgcattc cttgaaaccc agcatgacgg tattcaccac
     6661 ccgcgcggtc caacggtttg cttttccagg gacggcgttc gattcgtgaa taaacgtggc
     6721 tattccgcga aatcgcgcgg ccaacactgg cgcggtggaa gtgaacccgc ccatgcccag
     6781 aacggcgtgc ggattgaatt tgcgatagat agaccggcaa agtgacaagc tttccacaaa
     6841 gcggcgactg aacccaaaaa gcgccggcga aaatggcgaa ggcaacccta cagtcggtaa
     6901 tttttcgact tggaagttcg tccggccgga aagcgccact gcgtcgatgt ctttttcgga
     6961 aaccaacagc atcactgcgt gtccgcgatt ttgcagcact tccgccacag caatacccgg
     7021 aaaaagatgt ccaccggttc ctccgcatgc gattacagcg ttcatttggg ctaatttgag
     7081 ttacgggtta attaaattcg cagcgctaat tttgcgttca tcgtggcgcg tttcgccggg
     7141 ggcggctcga gaatgccctg gcgataaatg tttaccaata cgccgatgcc aaacatgcac
     7201 gcagcaaggt tggaacctcc atagctgata aagggcagcg ggagcccctt gttaggcaga
     7261 agcgacgtcg tcacgccgat gttgaccgcc gcctgcagag cgaggagcga aacaattccg
     7321 ccgccgagca gtaggccaaa acgatcacga gcgtgcagcg caatcatgat gccgcaaaca
     7381 attatcacaa cgaacaaaaa aaccaccaga agactgaacc gcaggccaag ttcttcgccg
     7441 atgatcggaa aaataaaatc cgtatgtgca tacggcagat acagcatctt ctgccgacca
     7501 ttacccagcc caagcccgtc catcccgccg ctgccccagg cgatcaaggc ctgcatttgc
     7561 tgcaagccgg catcgtcctt gtagttttgc ggatgaagaa acgcggagag tcgccccatg
     7621 cgctcggaga tttgcgtcgc aacgatcagt aatccgccta atcccgccac agcgacgccc
     7681 ccgagcaata gaggattagt gccggcaatg aacatcacaa cgaatgccat tgttccgatt
     7741 aaggctgtag ttcccagatc gacttccccg aggacaagcg cgaccggcgc gctgataact
     7801 gcaagcggaa taatgaatcc cgacaacacg ttgccatccg gtttttcacg tcgcgcaaac
     7861 caggcggcga gaaaaaagat cgtcgcgatt tttgcaagtt ccgatggctg aaaggtgatc
     7921 gggccgtagc cgacccagcg gcgcgagccg ttgatgcgca ttccgatgtg cgggatgtag
     7981 caaagcgcca gggcggccag cgccaccgcg aaccaaagcc accacgtttt ttgccagaat
     8041 tgataattca cgagcgccgc aaaaatgcac gcgaccagtc caatcccaat ccaaatcgcc
     8101 tggcgtttaa tgaaaaaata aacgtctcca tggctatcgc gtgcgtacgc actcgtgctg
     8161 aagagcatca cgatgccgat gacgagcaat cccagcactg ctaaaaaaag tatgtaggcg
     8221 cttttacgac gcatggggtg tcatggcatg aaagcgacgc gaggatgcgt gcgcactcca
     8281 aaagcttgcg cgaaatgaag cacgcgtgtc cgtagatttt gcgcgaagcg ctttgggagt
     8341 gcggtgcgtt ttcgcatcgc ttttctcgct actgatttca ttttgttttt tctttttatc
     8401 cgtcgcttta gagctcgagc tcttcggctt tgcggcttcg gggaccagaa gcttttgccc
     8461 gattttcaat ttgcgtgggt cgtcaatgtg attgagcgcg atcaaatcgt tgtaggagac
     8521 tttcaatttt tttgcgattc cgactggatt atcgcccttc ttaacaacgt aagtctttcc
     8581 tgaagacgaa ggcgtcttcg cctgttcgtc cttcgcaggt gaatgagaag gtttcggatc
     8641 atgtgggcga tcgttttctt tttgcgccac agcggctcga gccttttcgg aagtcgtgtg
     8701 atttgcggtt tgcgcggcgt aaacgggttt gttttcagtt tcgatcgacg cctgcggcac
     8761 gaatgcacgc tcacgcgtct taatggcgtt gaatgcaatg attcccgaca ccgcaactac
     8821 gtgtagaagc aaaacaatca gtaacgccct cgacaacttc atgtttggct ccggaatgcc
     8881 ttcgaactcc atccccgcgg acgcagctga cgcgcggcgt gccgtcgctg ccgatagttt
     8941 cttagccttg aaaaggcgcg ggattttaat ccgtttcatt gcgggagcgt ttgcaccagt
     9001 ttgcgaaatt gatcgccccg atcggcgtag cttttgaaca tgtcgaacga tgatgtgccg
     9061 ggagagaaca ggatcacgtc acctgcactg gcgagactgc gcgcacgctc gaccgcgtcg
     9121 gcgagtgacg ttgcaatttc ggatttgacc gcgccatccc atgaacgtct gatactccca
     9181 gccatctcgc cgatcaggac tgctgatttt actttgtctt ccaccagaga ccgcaacgga
     9241 tcgaacgtga atcctttctc tttgccgccg gcgatgagga ctaccggttt ggtctgtgcg
     9301 gccaaggctt tctcgaccgc gtccagattg gttgccttgg agtcgttgac gtattcgacg
     9361 ccagcgagtt cgcgcacaaa ttcgcagcga tgcgggcgcg gctcgtaatc tctaaccgcc
     9421 ggcaccatct gggcgaacga caatccgcgg acaacgccga cagcgagtgt cgccatcagg
     9481 ttctcgatgt tatgcagccc cggcagcttg gtatcaacca ggcgcaggac gggctgattt
     9541 tcataaacaa ttgcgccgtc ggctaaccgg aaatctgcgc gattggaata agcgctgaaa
     9601 gtaatccggg atggtcgaat tgccggaagc gcttccgcgg cgttgacgac tgcgacatcc
     9661 tgctcagttt gattttcgaa aatgcgcagc ttggccgcgc gatattcagc gacggagcga
     9721 taacgatcca agtggtcggg agcgaagttg agccagaggc tgatcgacgg acgaaatgcg
     9781 cggattgctt ccagttggaa cgagctcact tcaaccgtca gcacgtccaa aggctggttt
     9841 tcacgcgcga cctctgaaag tggtctgccg atattgccgc aagcgatcgt tcgctgaccg
     9901 caggcgttca acatttgcgc caataattct gtcgttgtgg tttttccgtt cgtgcctgtt
     9961 accgcgatga ctggcatttc gcaggagcgc caacccagct cgagctcact gatcgtttca
    10021 ataccgcgcg aggaaaaatt gcgcgccaac ggagaaattg ggtcgatgcc cggactgaga
    10081 accatccagt cgtacacaga tgagtcccgc tccgcctcag atccacaaag gacacgcacg
    10141 ccatgttccc gcagattatc cagtgtggat ttcagcaaat tattttcgcc ggcgctgtcg
    10201 agcactgtga cctgtgctcc ctgcgacgcg agcagcaacg ccgcggcgct cccgcttagc
    10261 cctgctccaa gcacagctac gttttggttt ttgtagcggc cgttgttcat cgcagtttga
    10321 gggtggcgag cccgagcaag gcgaaaatga tcgatagaat ccagaagcga acgatgacgg
    10381 tcgtttcctt ccagccggtt aactcgaagt gatgatgaag cggagacatg acgaaaaacc
    10441 gcttgccggt gagtttgaag ctcagcacct gcacaatcac tgagacggct tcgatcacga
    10501 aaacgccacc caccacggcc agaagcagct cctgcttgca acagatggct accaccccaa
    10561 tcatcccgcc gatggccagc gagccggtgt cgcccatgaa aaccttggct ggataacagt
    10621 tgaaccagag aaagcccagc cccgcgccga taagcgctga gcagacaacg gtcagttcgc
    10681 cggcgaacgg ataaaacggc acctgcaagt attccgccac gcggaaattg ccggccgcat
    10741 aacagagcaa ggcatacgca aatgccacgg tgatggtgca accagtcgcc aaaccatcca
    10801 gcccgtcagt gagattcacc gcgttcgatg tgccgacgat taccaacaga aaaaacacga
    10861 aagtgaacca gctcatattc gcaatcaccg gcgttttgaa gaaaggcacg tagagcgtac
    10921 gagcctgcac ttccagcaat ggatcggtga gaaagatgcc ggtgataacc gccgcgagaa
    10981 taatttgaaa agcgagttta atccgtccgg gaatcccttc ggatttcttc ttcgtgactt
    11041 tcagataatc atcggcgaat ccgagcccgc cgaggtaaac catgctgcat aacgcgagcc
    11101 agacgaactt gttgtcgaga cgcgcccaga ggatgctcga cacaaagacg gcggcaatca
    11161 ccagcacgcc gcccatggtc ggtgtgcctt gcttcacccc ttgcagttcg gcaagccggt
    11221 ggacttctgc cgcccctcta atcggttgtt cgactttcag tgcccgcagc tttgcgataa
    11281 tgaaatttcc aaaaatcagg gtggtcaaaa atgcggtgac cgccgcagca atggcccgga
    11341 aggtgacgta aagaaaaaca ttgaacccga tgaagtgccc gctcagatga tggaggtagt
    11401 acatcatggc gaagtcacga ataccgaatt ttgactgccg aattgctcga ttacttcctc
    11461 ggtgcgcgcg gcgcgacttc ccttgatcag gacgagatcc cccggctcgg caatttcgcc
    11521 taacaaccta gcagcttcgc tcgtcgatcg tgcggacaaa accttgtcca agccggcggt
    11581 gcgtgcgcct tccgcaatca gttcggccgc gtcgccaatc gtgatcagtt gatccacccc
    11641 gagcgtcgct gcggtctcac caatctcccg gtgcccgcgt tctgattcga tgccgagttc
    11701 ccgcatttct cccaataccg cgatgcgctt tccctcggtg tcgagctcga ccaacgtgcg
    11761 caacgccgct ttcatcgagt cggggttggc attgtagctg tcgtcgagaa attgcacgcc
    11821 accgatctct ttgatttgca agcgcgcttt cgtgagcggg gctgcggcga ggcccgcggc
    11881 acattcctca atggacagtc caaatgcccg cccagcggcg acggccagca atgcattctg
    11941 caccatgtgc gaacccgcca cgggaagttg cgcgcggcaa cgatgcgcgc tctcgacgat
    12001 tgtgaactct gagccctcgg cactctggcg aatttcaatc gcccgcacag ctccgcctgt
    12061 cgttccggcg aaaacaactt ttgcgcgggt gcgcgcagcg atcgcttcag tgaatggatc
    12121 gtcggcattc agaatcactg ttccttgcgg ctcgaccgct tcagccaacg cgcctttttc
    12181 cgtggcgatt gcttcccggg aacccatgaa ctcgatgtgt gccacaccga tgttcgtgat
    12241 gatcgccgca tcgggcgcgg cgatcttcga aagcgccgcg atttcgccgg gatgattcat
    12301 cccgatctcc cagacgccaa cttcatcctc ggaagtcgct tccagaattg tgcgtggcag
    12361 gccgacgtgg ttgttgaagt tcccttcggt tttggtgacc cgaaattttc gtgcgagcac
    12421 cgacgcagcg aaatcctttg tgctcgtctt gccattgctg ccggtgatcg caacgacttt
    12481 cagcgcgagc gactgccggt aattggctgc tagcatttga taggcctgca gcgtatcgct
    12541 tgcccgcaga agtacgaaat tgttcggaac gttgcccgcc caattgagat caacgagggc
    12601 tcctgtagcg ccagctttcg cactcgcttc gataaaatca tggccttcaa aattctcacc
    12661 gcgcaatgcg acgaacaatt cgcccggctt aatcgtgcgc gaatcggtac tgaccttatt
    12721 gactacgaca gtcccgtcac cggatgacag cgacgctcca gcgaactgtg cgatttgaga
    12781 gaccgtcagc ggattcataa ctatagctcc acgggatgat cttcgatcgc gcggcgtgcg
    12841 acctggatgt catcgaatgg gatggtgtaa tctgcgaact cctgataatt ttcgtgccct
    12901 ttgcctgcga ccaatacaat gtcgcgtgga ccggcgagcg caacggcgcg attaatcgcc
    12961 tcggtgcgat cgacaatttt ttcgtaatgc ttcgatcgaa agcctttttc agtttcgtcg
    13021 attatcgcgc ttgggtcttc ctttcgtggg ttgtcagaag tgatgatgga gtaatcggcg
    13081 agacggtcag ccatctcggc cattagaggc cgtttttgcc ggtcgcgatc gccgccacaa
    13141 ccaaaaaccg taatcaacct attcggttgg agttcgcgca gtgtcttcaa aacgttggcg
    13201 agcgcgtcag gagtgtgtgc gtaatccacg aacacttgaa attgtcgttt ggcaggaacc
    13261 agttccaggc gtcccgggac ttgcggcgct ttcccaagat tcaggactgc gcttcgcagg
    13321 ttgatcccca acatctccgc ggcagcgagc gccgcgatgg aattagcgac gttgaagcgg
    13381 ccaattaaag gaagacgaac gaggtaactc ttaccgcgcg cgtccaattg atacgatgtt
    13441 ccggtgaatt cggcgcgata gtttgaagcg cgaaaatcag cgcgcgctcc catcccacag
    13501 gtgataacag ccacgttttt gtcgagcctg ccgagcaact gctgaccgta acggtcgtcg
    13561 acgttcacaa tcgccaccgg tttggttttt tgtttttggc cgtcgagttc agtgaagagc
    13621 ttggccttgg ctgcaaagta gttttccatc gtgccgtgaa aatcgagatg gtcctgagtc
    13681 aaattcgtga agacggcgac gttccattcg ataccgcgtg tgcgcccctg ggccagcgcg
    13741 tgcgaagaga cttccatcgc tgccgctttg caccctgcat tggcgatctg ggccaggagc
    13801 tcttgtaaat cgagtgattc aggtgtggtg cgaatggctg gcagaatcct ttcgccgatc
    13861 tcgtaccgaa cagttccgat taatccgcaa cgtaatccgg cgttttcgca gatgtgtttg
    13921 atgagaaatg tcgtcgtggt tttaccattt gtgcctgtga ccgcggcgag ttttaacttg
    13981 cgtgccggat ggccgtaaaa agttgctgaa aaatccgcga gcgcagtgcg ggtattttca
    14041 acaagcagac aagtgacgcg tggatctttt tgttcgctct cggcgacgat caccgacgcc
    14101 cctttatcga tggcctgacc gatgaattgg tgcccatcgg ttttctcgcc ccgcaacgcc
    14161 acgaacatgg tgtgcctttg cactcgccgc gagtcatacg cgatattttc caccgggcga
    14221 tcaactgacc cgaggacttg gcgaactgga gtcgtagcga gaagggtctt gagctgcatg
    14281 aggctttaac atctccgacc ggagacggat ttgctacggc gaaccggggc gaggcactca
    14341 acgtcgcgaa cca
//
LOCUS       DATDAJ010000245         3105 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1393031, whole genome shotgun sequence.
ACCESSION   DATDAJ010000245 DATDAJ010000000
VERSION     DATDAJ010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1393031"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..636)
                     /locus_tag="VIS53_06150"
     CDS             complement(<1..636)
                     /locus_tag="VIS53_06150"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5767399.1"
                     /translation="MHSLRRFLIVSLAFLASASVVRSAAAAQAYLIADAQTGYILEEQ
                     EPRKKLQVGSLTKIATACVVLDWSEKKSGDLNGAVAIPPEAFQGTTENNIGFQPGDTI
                     SLRDLLYAALVQSDNIAAYTLAYHVGSQLDAVEAGAKLTQADKFVAQMNALAKQLKME
                     RTRFVNPHGIDWKVKPLPYSTAEDMARLTRYAMNKPSFRFYVSQKERQISFN"
     gene            complement(843..1394)
                     /locus_tag="VIS53_06155"
     CDS             complement(843..1394)
                     /locus_tag="VIS53_06155"
                     /inference="COORDINATES: protein motif:HMM:NF021363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2062 domain-containing protein"
                     /protein_id="HEY5767400.1"
                     /translation="MKPQKAQQPQQPGEPVFESRLPKPLARLKGWLVAHHMTLMTIAD
                     TPHSIALGSAIGIFFGFTPLYPVKTLLSIVVAWIFRCNKIAAASAVTLHDVLIWAMPA
                     IYVAEYHLGCWSLQRPVAQRVHFRQFGLRDYIHWHVFSRVVWPTYWPAFIGSLFLAVP
                     SAIIVYFLMRLLISRARTTQKIE"
     gene            complement(1545..2462)
                     /locus_tag="VIS53_06160"
     CDS             complement(1545..2462)
                     /locus_tag="VIS53_06160"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5767401.1"
                     /translation="MKGKILVGTASWSDPGFVERWYPTKLPAGDRLPWYAQHFDLVEI
                     NSTFYSTPEPRMVERWCAVTPDRFTFDVKLHQLFSFHSTPAKLLPPDLQSRAETDAKG
                     KVKPTRDVQQALLKVFLRATAIFRSAGKMGVMLLQLSPAFSPRKHDLNELAPLIEMLN
                     GYELAIEFRNRNWVIGDELQSTTDFVRKHGAIFVNVDAPASDHFTVMRSDVDEVTNSN
                     VAYLRLHGRNVKAYITGKTVAARFDYDYKEKEIAEVAERSRKLAKEARELHVIFNNNN
                     LDYAPRAAIRLRKALGQIVNTPAETLELF"
     gene            2563..2639
                     /locus_tag="VIS53_06165"
     tRNA            2563..2639
                     /locus_tag="VIS53_06165"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2597..2599,aa:Met,seq:cat)
     gene            2705..2779
                     /locus_tag="VIS53_06170"
     tRNA            2705..2779
                     /locus_tag="VIS53_06170"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2737..2739,aa:Asn,seq:gtt)
     gene            2786..3043
                     /locus_tag="VIS53_06175"
     CDS             2786..3043
                     /locus_tag="VIS53_06175"
                     /inference="COORDINATES: protein motif:HMM:NF013691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEY5767402.1"
                     /translation="MFWVYILQNPDGHFYVGHTDNLANRVASHNRTNKISGKFTRKNG
                     PWALVWSEEQPDRSSAMRREREIKNWKSARLIRDRLVNTKA"
BASE COUNT          719 a          886 c          816 g          684 t
ORIGIN      
        1 attaaatgaa atctggcgtt ccttttgcga cacataaaaa cggaagctcg gcttgttcat
       61 tgcgtatcgg gtgagacgcg ccatgtcttc cgccgtggaa tacggcaggg gcttcacttt
      121 ccaatcgatg ccgtggggat tgacaaaacg tgtgcgctcc atctttaact gtttcgccag
      181 tgcgttcatc tgagcgacga acttgtccgc ctgtgtcaat ttcgcgcctg cctcaactgc
      241 atccagttgc gaaccaacgt gataggccag cgtgtacgcg gcgatgttgt cagattgcac
      301 aagcgcggca taaagaagat cgcgcaacga gatggtgtca cccggttgaa agccgatgtt
      361 gttttccgtg gtcccttgaa acgcctccgg cgggatggcc accgcgccat tgagatcgcc
      421 ggatttcttc tctgaccagt ccaacaccac gcatgccgta gcaatctttg tcagactacc
      481 gacctgcagt tttttcctgg gttcctgttc ttccaaaatg tagccggttt gcgcgtcggc
      541 aataaggtat gcctgcgccg ctgccgccga acgaacaaca gacgcgctcg caagaaatgc
      601 gagggaaacg atcagaaatc gacgtagtga gtgcataaga tccccggaac ggcagcacct
      661 taatcggcgc attctgattc gcaaacgcta ccacgttgat tacaacgtgt tccaatcaca
      721 aacgaagctg gcccggcttc tccgaagccg atgccgatcc aatcgccgaa ggcgcaaata
      781 ttgagcgcaa agccgcgttt ctgccaatag gttgaggagt cggcgcggcg accgttccac
      841 catcattcaa tcttctgcgt cgtccgcgcg cggctgatca gcaagcgcat gagaaaataa
      901 acaatgatcg cggacggaac ggctaggaag agcgaaccaa taaaggcggg ccagtaggtg
      961 ggccaaacga cccgcgaaaa tacgtgccag tggatgtaat cgcgcaagcc aaactggcga
     1021 aaatgcacgc gttgagccac cggacgctga aggctccagc acccgagatg atattcggcg
     1081 acatagattg ccggcattgc ccaaatcaga acatcgtgca gcgttaccgc actcgcggca
     1141 gcgatcttgt tgcaacggaa aatccacgct accacgatcg acagcaacgt cttcaccgga
     1201 tacagcggag tgaacccgaa gaaaattccg atcgccgacc cgagagcgat cgagtgcggc
     1261 gtatcggcga tcgtcatcaa cgtcatgtga tgcgcgacca accacccctt cagccgcgcg
     1321 agcggcttcg gcagacgcga ttcaaaaacg ggctcgcctg gctgctgtgg ctgctgtgcc
     1381 ttctgtggtt tcaatgtcac ccaatttggc agaaaacgcc gaacacccaa cgtccaacgc
     1441 ccaacatcga attacagaat cgcgcgcctc agtgcgagca gcaatgctgc gcttgcttcg
     1501 gcgttggatg ttcggcgttg agcgttggac gttttctttg tgagctagaa caactccaat
     1561 gtctccgccg gcgtgttaac gatctggccc agcgccttgc gtagacgaat cgccgcgcgc
     1621 ggcgcgtaat cgagattgtt gttgttgaaa attacatgta gctcgcgcgc ttcctttgcg
     1681 agttttctgc tgcgctccgc gacctccgca atttccttct ccttgtaatc gtaatcgaaa
     1741 cgcgccgcca cggtttttcc cgtgatgtaa gctttcacgt tgcgtccatg caggcgcagg
     1801 tatgccacat ttgagtttgt cacttcatcc acatctgatc gcatcacggt aaaatggtcc
     1861 gatgcgggcg catccacgtt cacaaaaatc gctccgtgct tccgcacaaa atcagttgtc
     1921 gattgcagtt catcgccgat cacccagtta cggtttcgaa actcaatcgc cagctcgtac
     1981 ccattcagca tctcgatgag cggcgcgagc tcgttcaagt cgtgtttccg tggcgaaaac
     2041 gccggcgaaa gttgcagaag cattacgccc atttttcctg cactgcgaaa gattgcggtc
     2101 gcacgcagaa aaacttttag cagcgcctgc tgcacgtctc gcgtcggttt gaccttccct
     2161 ttcgcatccg tctccgcgcg gctttgtaga tctggaggca acagctttgc cggcgtcgag
     2221 tgaaatgaaa acagctggtg caattttacg tcgaacgtga aacgatccgg cgtcacagcg
     2281 caccaccgct ccaccattct cggctccggc gtggaataga acgtcgagtt tatctcgacc
     2341 aagtcgaaat gctgcgcata ccacggcaac cggtcgccag ccggcagttt tgtcggatac
     2401 caacgctcca caaaaccggg gtccgaccaa ctggccgtgc caacaagaat tttccctttc
     2461 acctattcaa cgaagtcgcg atgcggcgaa agacaaacgc gtttcagcca agtggagcgt
     2521 ttttcgattt gcagagagtt gatgtcccaa ctattttcat cccgcggggt ggagcagcct
     2581 ggtagctcgt caggctcata acctgaaggt cgctggttca aatccagccc ccgcaaccaa
     2641 ttctctcttg ccgcacgcgg tcctgtgcgc aaagttcaac gccgctcaat cgagcgcatc
     2701 gcgatccaga gtagctcagt ggtagagcgg tcggctgtta accgattggt cgtaggttcg
     2761 aatcctacct ctggagccac ttggaatgtt ttgggtctat attcttcaaa acccggacgg
     2821 tcacttctac gtcggccata cggacaatct cgcaaatcgg gttgccagcc ataatcgcac
     2881 caacaagatc agcggaaaat ttacgcggaa aaacggaccg tgggctttgg tgtggtctga
     2941 agagcagcca gatcgctcaa gcgcaatgcg acgcgagcgc gaaattaaga actggaaatc
     3001 tgcacgtttg atacgggatc gtctcgtcaa cacgaaggcg tagcacagtg gtagagtcct
     3061 gacgtagtcg ggattaaccg atgggtccta ggttcgactc ctacc
//
LOCUS       DATDAJ010000246         3575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1397399, whole genome shotgun sequence.
ACCESSION   DATDAJ010000246 DATDAJ010000000
VERSION     DATDAJ010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1397399"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VIS53_06180"
     CDS             <1..786
                     /locus_tag="VIS53_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5767403.1"
                     /translation="PGCPDGIDGPELILNMHRQAEKFGARFSYAEVTDFDPSNKPIRI
                     KADDEWLETQALIIASGAAARYLGLDGEEKLVGHGLTSCATCDGAFYKNVPVCVVGGG
                     DSAAEESTFLTRFASKVYLIHRRDKMRASKIMQERVFANKKIEPIWDTVVTQYIADEK
                     GEMRAVRLRNLKTKEERELEVACVFVAIGHDPNTKAYRGKLDMDGEGYLLAKNGVESK
                     VPGVFIAGDVADRVYKQAVTAAGMGCAAALQAEKYLSDLQSHD"
     gene            906..2081
                     /locus_tag="VIS53_06185"
     CDS             906..2081
                     /locus_tag="VIS53_06185"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5767404.1"
                     /translation="MKICDLTQFYSPVSGGVKRYLHEKIDYIDRHASRYEHVLIVPGA
                     KTKLKANGRSRVYTIRSPLVSRTAQYRALLNLRAVEEILDREQPDVIESADPYQLGWK
                     ALKVGRALRVPVVGFYHSHFPEAYVRKSAMLLGKTATHRVMKLSRAYVRKLYNQHAAT
                     VVASDLLGRVLRDWGVHNVRVLSLGVNTEIFRPDGSGTEAIRRSLGVKSGQNLLLYVG
                     RLAKEKNTATLLRAFKTLQRRRPNEFHLLVIGDGPDRTQLRKLQLRTDNVSWIRYCAD
                     PCELAAFYRAADLFVHPGVQETFGLAALECQACGTPVVGIRGSYMDNVICHDQESWAL
                     ENSADALVNAIEGCSDRKLAVMGRNAARVARSVYSWPRVFDELFCIYGELRSKYRRF"
     gene            2082..2777
                     /locus_tag="VIS53_06190"
     CDS             2082..2777
                     /locus_tag="VIS53_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767405.1"
                     /translation="MLNDDHQPFLIRGYRASDREAVRKLCCETGFLGEPIDPVYQDRE
                     LFADFLTTYYTDHEPESCFLLEVNGEISGYLLGSRKPLQNQLYALYQNVWLFFRALTR
                     YFRYNQRSRRFIRWILMYGWREVPAQPRRVPHFHVNLLPEARKVSTTRALMSAYLSYL
                     YRSGEKRVCGQIITFESRRGEKMFERYGFKVLNRAEITKYKAFYPESVYLSTVIKNLE
                     TADPLSAYSRARE"
BASE COUNT          825 a          970 c          997 g          783 t
ORIGIN      
        1 cccgggtgtc ccgacggaat cgatggcccc gaactgattc tgaatatgca caggcaggcc
       61 gagaaattcg gcgcccgctt ttcatatgcg gaagtgaccg atttcgatcc gagtaacaag
      121 cctatccgga tcaaagccga tgatgaatgg ctggagacgc aggcgctaat catcgccagc
      181 ggcgccgcgg cccgatatct cggactggac ggtgaagaga aactggtcgg acatgggttg
      241 acgtcctgcg cgacttgcga cggcgcattt tacaaaaacg tgccggtctg cgtcgtgggc
      301 ggcggcgatt ccgcggcaga ggaatcaacg ttcctcaccc ggttcgcttc aaaggtttat
      361 ctgattcatc ggcgcgacaa aatgcgcgcg tcgaagatca tgcaggagcg cgtgttcgcg
      421 aacaagaaga tcgaaccgat ctgggacacg gtcgtgacgc aatatatcgc ggacgaaaaa
      481 ggtgagatgc gtgcagtgcg tttgcgcaat ctgaagacaa aagaggaacg cgagctcgaa
      541 gttgcatgcg ttttcgtagc gatcgggcat gatcccaaca ccaaggcata tcgaggcaaa
      601 ctcgatatgg acggtgaggg ttatctgctc gcgaaaaacg gtgtcgaaag taaagttccc
      661 ggcgttttca tcgccggcga cgtggctgat cgggtttaca aacaggccgt taccgctgcg
      721 ggaatgggtt gtgccgcggc actgcaggcg gagaagtacc tgagcgatct acagtcgcat
      781 gattgacctc aaacggcgcg ctcctcttgt catcctgagc ggagtcgaag gatcccgtgg
      841 cagtactgtt aggttgttcc gcgggattcc tcaactccgc tgcgctcgct gggaatgaca
      901 aacccgtgaa gatctgcgat ctcacccaat tttattcgcc ggtaagcggc ggcgtgaagc
      961 gatatcttca tgagaaaatt gattacatcg acaggcacgc gtcgcgctac gaacacgttc
     1021 ttattgttcc tggcgcgaag acgaagctga aggcaaacgg gcgctcgcgt gtttacacaa
     1081 ttcgttctcc tcttgtgtcg cggacggcgc aataccgcgc gctcctgaat cttcgcgcag
     1141 tggaagaaat tttggaccgg gaacagccgg atgtcatcga gtctgctgat ccgtatcagc
     1201 tcggctggaa agcattgaag gttgggcgcg cgctgcgcgt acccgtggtc ggattttatc
     1261 actcgcattt tccagaagcg tacgtccgaa agagcgcaat gctccttggg aaaacggcga
     1321 cacatcgcgt gatgaagctt tcccgcgcat acgttcgcaa actctacaat cagcacgccg
     1381 ccacggtcgt cgcatcagac ctgctgggcc gcgtgctgcg tgactggggc gtacacaacg
     1441 tgcgtgtgct aagccttggc gttaatacgg aaatcttccg ccctgacgga tccggaactg
     1501 aagcaatacg gcgctctctt ggggttaaat caggtcaaaa tctccttctt tacgtaggcc
     1561 gtttggcgaa agagaagaac acagcgactt tgcttcgcgc tttcaagact ctacaacgac
     1621 gccggccgaa tgaattccat ttgctcgtga tcggcgatgg gcccgaccga acgcaactcc
     1681 ggaaactgca actgcgaact gacaatgttt catggattcg ctactgcgct gatccctgtg
     1741 agctcgccgc gttttatcgt gccgccgatc ttttcgttca tcccggtgtt caggaaacat
     1801 ttggccttgc agccctggaa tgccaggcgt gcgggacgcc ggtagtggga attcgcggta
     1861 gctatatgga caacgtcatt tgccatgacc aggaatcgtg ggcgctggaa aacagcgccg
     1921 acgcgctggt gaacgcgatc gaaggctgca gcgacaggaa attagcggtt atgggcagga
     1981 acgccgcacg cgttgcgcgg agcgtgtaca gctggccgcg tgtgtttgac gaactgtttt
     2041 gcatttatgg cgagcttcgc tcaaaatatc gccgatttta aatgctgaac gatgatcacc
     2101 agccgttcct catccgtggc taccgggcat cagatcgcga agcggtaaga aaactctgct
     2161 gcgagaccgg cttcctcggc gagccgattg atcccgtgta tcaggatcgg gaattgttcg
     2221 ccgattttct caccacctat tacaccgatc acgaaccgga atcctgtttt ctcctcgagg
     2281 tgaatggcga aatctccggc tacctgctcg gttcgcgcaa gccgctgcaa aatcagctct
     2341 acgcgcttta tcaaaacgtc tggctgtttt tccgggcgtt gacccgctac ttccgttaca
     2401 accagcgctc gcgtcgtttc attcgctgga tactcatgta cggctggcgc gaagtccccg
     2461 cccagccgcg gcgagtgccg cactttcatg tcaacctcct gcctgaggcg cgaaaggttt
     2521 cgacaacccg cgcgctgatg agtgcctatc tgagttacct ttatcgctcc ggcgagaaac
     2581 gcgtctgtgg ccagatcatc acgtttgaga gccgacgcgg cgaaaaaatg ttcgaacgtt
     2641 acggcttcaa ggttttgaat cgggcagaga tcaccaaata caaagcgttt tatcccgaat
     2701 cggtctacct cagcacggtt atcaagaact tggaaaccgc cgatccactt tccgcttact
     2761 cccgcgcgcg cgagtaagcc gaaatcgccg ggaagaacag attcggtgtg cagcaccggt
     2821 tcccttcgtc agcaaaaaaa gagcgtaaga gcagacacaa tttcagttcg gcggcgtcta
     2881 tgacatagat gagcatgcca cccgagccac cggaacggct cgcagaaatc ctgctggaga
     2941 ttctggcgtt gtctaagtca aaccggacca gcgaatcgga gtccgcacgc cgcagtgatc
     3001 caatcggatt attcgacccg cactgcgtta aagagcagtt ggaacgagca gatgaaagag
     3061 acaacaatcg gcaaagacca tagcgcacgt cgagttaaca cttattcgtc atgcagtgag
     3121 atcgtcggac gaactcttga tgaactcgct aaaccggctt tcatatggac agcgccggca
     3181 tagctcagtt ggttagagca gctgatttgt aattcaagcc taacgagttg cgcatcattt
     3241 cactgcgttg cacagcatgc cgacgctagg taattcggcc tgtaggcgat ctcacagctt
     3301 gtcgtagcat tgcatcgttt tgcagcaaaa tttcgctcga ccgtagaaca gaccgtagaa
     3361 atttcgccag ttcgataagc gcgaaagtcg cgactaagcc actattacta acgccgcgtg
     3421 accccacgcc cgcctggatc gttgaaagtt gaatatgctg gcgcatgacg gacgcccttt
     3481 cctctcgact ctgggcagcc tacttgagag tatcgtcgcg tcgggcattt ccatctgaat
     3541 ccaaatggcc gccgaagtta ggaaagagat tgagc
//
LOCUS       DATDAJ010000247         5460 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1403160, whole genome shotgun sequence.
ACCESSION   DATDAJ010000247 DATDAJ010000000
VERSION     DATDAJ010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5460
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403160"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VIS53_06195"
     CDS             complement(<1..515)
                     /locus_tag="VIS53_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767406.1"
                     /translation="MKTKAKTFHIIVWSMLTLAGFNLLAAKEPLYDGLGSYSRKVTTD
                     SAEAQHYFDQGFGFLHGFNHRAAIRAFQQAAELDPQCAMAHWGVALACGPHINSMAVP
                     PPAAELAWKELELAQRNARNASPVEQALIDALAKRYASPPQPEDRSGLDRAYADAMRE
                     MWKEYPKDPDVG"
     gene            complement(586..900)
                     /locus_tag="VIS53_06200"
     CDS             complement(586..900)
                     /locus_tag="VIS53_06200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767407.1"
                     /translation="MKPILQINHQQRGSRRDKRARPGHQSFPLTDYNYRPTAEAEASS
                     LAGRPATKEPAFHKLSSKFFGAETSRDYVAELLFFVLITCLAAWPVMSMLIAVIRMIR
                     NY"
     gene            complement(1206..1622)
                     /locus_tag="VIS53_06205"
     CDS             complement(1206..1622)
                     /locus_tag="VIS53_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767408.1"
                     /translation="MKLFYAVIFFSLLASAAFAREESILARVTSYWAGEGSKFASTGR
                     RLHSGHCAVDPKRIPYGSKVVFPDRACTAVDTGPAVVSRKAARLCGRTASQLKAIVVD
                     RFFETKREAMAWTNAHPHFMTLQIVRPGFHSEPPEL"
     gene            1876..2991
                     /locus_tag="VIS53_06210"
     CDS             1876..2991
                     /locus_tag="VIS53_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767409.1"
                     /translation="MGLKILILLFSKDLRRPEISKCEGVTAASAGCTVGKMEAVDWAS
                     LSDQELLERRISTLGLRLQGTALEPLIQQLYVELSAKGLVFHPPCHIGDEWFVPVGVP
                     AIFVPFFLVHDRLRALERTMMLEVEGGTPDWFMKLMRHEAGHAYMYAYQLTRRKKWKQ
                     CFGQTSREETPDTYRPRPFSRSYVVHLEDWYAQSHPDEDFAETFAVWLTPGLDWRKNY
                     AGWPALRKMEYIDELMRSLAGMPPVHTPEYRVADYDCLNVKLKTYYARKRKLNEDTYP
                     DFYDADLRQLFAAPAGIKAGAYLRRRRRRLLNAVCQWTNEKKFPVNHLLARLTSRCDE
                     LGLHVLNDDPQQDFRVTAFITTLVMNYLFTGKFKRTK"
     gene            3151..4170
                     /locus_tag="VIS53_06215"
     CDS             3151..4170
                     /locus_tag="VIS53_06215"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY5767410.1"
                     /translation="MKKKLKVLVLFDGTSPTTVDQDFSDELKTKEWKTEADVMNALRV
                     MGHTPEHLAIYDDVDLLRQKLETFAPDVLFNLVEQFRNKSEFDQNIVSFFEMQGLPFT
                     GCGSTGLTLCKHKGISKKILHYHGIHVPNFVVIPRGQRIGRLKQPKFPLIVKPVKEEA
                     SYGISQASFVGNDEQFRERVTFIHEKYNSDVIAEEYIEGRELYVSLMGNVRLTVFAIR
                     ELVFREVPPDEPKIATYKAKWDEEYRKRWGLENQFAENLDPALLTNIQEKCKEIYRLL
                     TIDGYARIDLRLTPENKLYFIEANPNPILADDEDFALAAGKSGLAYPQLIERIVRQGI
                     NTVRD"
     gene            4294..4701
                     /locus_tag="VIS53_06220"
     CDS             4294..4701
                     /locus_tag="VIS53_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5767411.1"
                     /translation="MSVQVYGCNHVAIEVDDVEKAVAFYKDVFNLEQMRGGEGDAFFK
                     LGDHQFLAIFEVDKVQRANMRHFGIMVRDETQLEEVRTKLTGKYKLKLEPPFRCDFRD
                     PWGNRIQVVDLHDESLVWLLPYREVQKTGIKFK"
     gene            4712..5083
                     /locus_tag="VIS53_06225"
     CDS             4712..5083
                     /locus_tag="VIS53_06225"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY5767412.1"
                     /translation="MQLALERCIIRPWRLDDAESLVRHANNRKIWLAVRDLFPHPTVG
                     YWLGEKFWGRGIMTEVVTAVTDFCFDNFPFRRISAEVFANNPASARVLEKAGFTLEGR
                     LKNHILKDGEVLDSLLYAPTK"
     gene            5150..>5460
                     /locus_tag="VIS53_06230"
     CDS             5150..>5460
                     /locus_tag="VIS53_06230"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5767413.1"
                     /translation="MISFIVPAYNEEHELSDTLVAIREAASAAARPYEIIVVDDASTD
                     ATSTIASQAGAKVIPINRRQIAASRNAGARTAQGEYLFFIDADTRINRAHVSGGIAAL
                     EG"
BASE COUNT         1273 a         1421 c         1538 g         1228 t
ORIGIN      
        1 ccaacgtctg gatcctttgg atattctttc cacatttcgc gcatggcatc ggcataagcg
       61 cgatccagtc cgctgcgatc ttccggctgc ggcggactag cgtagcgttt tgcgagggca
      121 tcgataagcg cctgctcaac cggcgatgcg ttcctagcgt tcctttgagc cagctcaagt
      181 tccttccacg caagctccgc tgcggggggt ggaacagcca tagagttaat gtgcggaccg
      241 cacgcgagcg ctacgcccca gtgcgccatc gcgcattgtg gatcgagttc cgcggcttgc
      301 tgaaacgccc ggatggccgc gcgatgattg aatccgtgga gaaaaccgaa gccctgatcg
      361 aaatagtgtt gtgcttcggc cgagtcagtc gtgaccttgc gcgaatagga gccgagcccg
      421 tcgtaaagag gttccttcgc tgcaagcaga ttgaagccgg ccagtgtcag catcgaccag
      481 acgattatat ggaaggtttt ggccttcgtt ttcataaatg gtcatgccaa actattcgcg
      541 gcattttcga cggcaaccgc taacatcgct gactaatcca gtccgttagt aattcctgat
      601 catacgaatc actgcgatga gcatcgacat gactggccac gcggcgaggc atgtgatcag
      661 aacgaagaac aaaagctcgg caacataatc ccggcttgtc tctgcgccga agaatttact
      721 gcttaatttg tgaaaggcgg gctccttcgt ggccggccga ccagcgaggg aactcgcctc
      781 tgcttccgct gtcggacgat aattgtaatc cgttaatgga aaactctggt gaccaggccg
      841 tgcgcgcttg tcgcgacgtg agcctcgctg ttggtgatta atttgaagta ttggtttcat
      901 aactttctaa gttgttaagt gtggttgtcg aagtgggttc gggataccgg cgcgaaaaac
      961 ccgcgcgtgg taagattcga ccactggggt gccccgaagg cgttcggggg ctccaacttg
     1021 gcgaaaatct aacgggcctc tatgccgctc gcccgcccca gcgggcagcg cgaatcggcg
     1081 cgttgatcaa tttcatcggc tcttcatgta cgggcgtttc cgtgtttgtc cagtgtctgc
     1141 cgaagatgtc agctgtaagt ccctgtcgtc gtgggagaag cgattacgaa tatttttcca
     1201 actaatcata gctcgggcgg ttctgagtga aatccgggcc ggacaatctg aagtgtcata
     1261 aagtggggat gcgcgttcgt ccacgccatc gcctctcgct ttgtttcaaa aaatcggtcg
     1321 accacgatgg ccttgagttg gctcgcagtt cgcccgcata gacgagccgc cttgcggcta
     1381 accaccgccg gtccggtgtc gaccgcggtg caggcgcgat ccgggaagac aaccttactg
     1441 ccgtagggaa ttcgcttcgg atcgacggcg caatgtccgg agtgtagtcg tcgaccggta
     1501 ctggcgaatt tggagccctc acctgcccag taactggtca cacgagccag gatcgactcc
     1561 tcgcgcgcga aagcggccga tgccagcaat gagaaaaata tgactgcgta aaatagcttc
     1621 atggtgtttg gggttgctcc gatgttgtcg agtctcgtgt cgagcaccta ttctcgatgc
     1681 cgaaagccgc gggaatgcag cttctacttc ggattcggaa cagccccggc gcgccaatcc
     1741 ttgggggacg cgcggacttc tgacaacgac tcgccgcggc gagtcggcct ctctatagac
     1801 gggttgggcg acttgtcaat cgcgtcacgt cttcatcgac agatggcttc cattcgaaag
     1861 gatcgttaag cgtcgatggg attgaagatt ttgattctcc ttttttcaaa agatctccgc
     1921 aggcccgaga tctctaagtg cgaaggcgtg acagcggcga gcgcgggctg taccgtcggg
     1981 aaaatggaag ctgtcgattg ggcgtcactg agcgaccagg aacttctcga acgccggatc
     2041 tccacacttg gcttacgcct tcagggaaca gcgctcgaac cgttgatcca acaactttac
     2101 gtcgagctct cggcaaaagg cttggtgttt catccgccgt gtcatattgg cgatgaatgg
     2161 tttgtcccag ttggggttcc tgcgatcttt gtcccattct ttctggtgca cgaccggcta
     2221 cgggcgctcg agcgcacgat gatgctcgaa gttgaaggtg ggactccgga ttggtttatg
     2281 aagttaatgc gacatgaagc ggggcacgct tacatgtacg cttatcaact gacgcgtcgg
     2341 aaaaaatgga agcaatgttt cgggcaaaca tcgcgagagg aaacgccgga cacttaccgg
     2401 ccacgcccct tcagccgtag ttatgtcgtt catcttgagg attggtatgc gcagagtcat
     2461 ccggacgagg atttcgcgga aacatttgcg gtatggctca cgccgggact cgattggcgc
     2521 aagaattatg ctggctggcc ggcactccga aaaatggaat acattgatga gctgatgcgc
     2581 tctttggcgg gcatgccgcc ggtgcacacg ccggaatatc gcgtcgccga ttacgattgt
     2641 ctcaacgtaa agctcaaaac gtattacgcg cgcaaacgca agctcaacga agatacctac
     2701 ccggattttt acgatgccga tctacgacag ctcttcgccg caccggctgg gattaaggca
     2761 ggcgcctatt tgcgccgacg gaggcggcgg ttactgaatg cggtttgcca atggacaaac
     2821 gaaaagaaat tccccgtgaa ccacctcctt gcgaggctta ccagccgatg tgatgaactt
     2881 ggactgcatg tgctgaatga cgatccgcag caggattttc gtgttaccgc tttcatcacg
     2941 acactggtga tgaattatct tttcaccggc aaatttaagc ggacgaagta accaatcgtc
     3001 attgtcatgt tgagcgaagc gaaacatctc ggactatgga ctgtgtcggt ccgaacgccg
     3061 gatctgagat ggaaagcctg gcctcgcgga cttcgtccgc tgcgttgcag cttcgctccg
     3121 ctcagaatga cagcggactg agaataggac atgaaaaaga agctcaaagt cctagtgctg
     3181 ttcgacggca caagtcctac cactgttgac caggatttca gtgacgaatt gaaaacgaaa
     3241 gagtggaaga ccgaggcgga tgtgatgaac gcgctccgcg tgatggggca cacgccggag
     3301 catctggcca tctatgatga tgtcgatctg ctgcggcaaa aactggagac gttcgcgccc
     3361 gatgtccttt tcaatctggt cgaacaattc aggaacaaat ctgaattcga ccagaacatt
     3421 gtttcatttt tcgaaatgca agggctgccg ttcacgggct gcggctcgac cgggctgacg
     3481 ctttgcaaac acaaggggat ctcaaaaaag attcttcact atcatggcat tcacgtgccg
     3541 aatttcgtgg tcattccgcg cggacagcgg atcgggcggc tgaagcagcc gaagtttccg
     3601 ctcatcgtga agccagtaaa agaagaggcg tcgtacggga tttcacaagc gtctttcgtt
     3661 ggaaatgacg agcagtttcg cgaacgcgta actttcatcc acgagaagta caacagtgac
     3721 gttattgccg aggaatacat cgagggtcgc gagctttacg tgagtctgat gggcaatgtg
     3781 cgattgacgg tttttgcgat tcgcgagctt gtgttccgcg aagtgccgcc tgatgaacca
     3841 aagatcgcca cttacaaagc caaatgggac gaagaatatc gaaaacgatg gggcttggag
     3901 aaccagttcg ccgaaaacct cgatcccgcg cttctcacta atattcagga aaaatgtaaa
     3961 gagatttacc ggttgctgac aatcgacggc tacgcgcgaa tcgatttgcg cctaacacct
     4021 gaaaacaaac tctatttcat cgaggcgaac ccgaatccca ttctcgctga cgacgaagac
     4081 ttcgcgcttg cagccggaaa gtcagggctg gcgtatccgc aactgatcga gcgaatcgtc
     4141 cggcaaggca taaacacggt tcgagactga ttagaaagga tgccggagtt acaaccagtt
     4201 ctttacgcgc gaccaacgtt ctcgaaagct cacctgacgg cgacagacat gatgacaaaa
     4261 tcgccacgat ttcattttcg attaaagtga catatgagcg tgcaagttta tggatgcaat
     4321 catgtcgcca tcgaagtgga cgacgttgaa aaggcggtgg ccttttacaa ggatgttttc
     4381 aatctcgaac agatgagggg cggcgagggc gacgcgttct tcaaactggg ggaccatcag
     4441 ttcctggcga ttttcgaagt cgacaaagtt cagcgagcaa acatgcgcca tttcgggatc
     4501 atggttcgcg atgaaacgca gctcgaggaa gtcagaacga aacttaccgg gaaatacaaa
     4561 ctcaaattgg agccgccgtt ccgctgcgac tttcgtgatc catggggaaa tcgcattcag
     4621 gtggtcgacc ttcacgatga atcactggtc tggctgttgc cttatcgcga ggtgcagaaa
     4681 acgggtatca agttcaaata gcgagtaatc gatgcagctc gcgctcgaac ggtgcatcat
     4741 tcgcccgtgg cggctggacg acgctgagtc gctggtaaga cacgcgaaca atcgcaaaat
     4801 ctggctggcg gtacgcgatc ttttcccgca tccgacagtg ggttactggt tgggcgagaa
     4861 gttctgggga cgcggcatca tgactgaagt cgtgaccgcg gttactgatt tctgtttcga
     4921 caattttccg ttccgccgaa tctccgcaga agtgtttgcc aacaatcctg catccgcacg
     4981 cgtgctggaa aaagccggat tcactctcga agggcgcctc aagaatcaca tcctcaaaga
     5041 cggagaagtt ctcgattcac tgctgtacgc cccgacaaag tagcgccgcg cgagctggcg
     5101 acttgcgtgt ctggtgatca caggcgatat ggctcgcctc agcaaaccaa tgatttcatt
     5161 tatcgttccc gcttacaacg aagagcacga gctttcggat accctggttg cgattcggga
     5221 ggcggcttct gccgcagcac gaccatacga aatcatcgtc gttgatgatg catcaacgga
     5281 cgcgacgtcg acgatcgcat cgcaggcagg cgcgaaggtg atcccaatca atcgacgcca
     5341 gatcgcagcc tcccgaaatg caggcgcacg cactgcccag ggcgagtatt tgttcttcat
     5401 cgacgccgac acgcggatca atcgagcgca tgtgagtggg gggatcgccg ctttagaagg
//
LOCUS       DATDAJ010000248         2431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1418509, whole genome shotgun sequence.
ACCESSION   DATDAJ010000248 DATDAJ010000000
VERSION     DATDAJ010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1418509"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(111..1475)
                     /locus_tag="VIS53_06235"
     CDS             complement(111..1475)
                     /locus_tag="VIS53_06235"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY5767414.1"
                     /translation="MAIASINPATGEKLKEFSPFDDAEIEKRLSRADKAFKSYRRTTL
                     TERAELLHAVSELLFQETKTFAEIITLEMGKLFRDSIAEIEKCARGCRFYAENGARFL
                     EEEPAQTDAAESYVEYQPLGPVLAVMPWNFPFWQVFRFAAPALIAGNVGLLKHASNVS
                     QCALAIEEIFCRAGFEDGVFQTLLIEPEQVEKLIVDARVRAVTVTGSEKAGAAVASAA
                     AREIKKSVLELGGSDAFIVMPSADFESALSTAVKARTINTGQSCIAAKRFIIADEIHE
                     QFLQQFVERMRALKVGDPMDPETELGPLTTEQILRGVDDQVQKTIAQGAKLLTGGNRI
                     HGPGFFYEPTVLVDVPKESPAYREEIFGPVAAVFRVGDAYAAVELANDTTFGLGSSAW
                     TKDREEQKLFTSELDAGMVFINAMVASDPRLPFGGVKRSGFGRELGAAGIREFTNTQT
                     IWIS"
     gene            complement(1546..2118)
                     /locus_tag="VIS53_06240"
     CDS             complement(1546..2118)
                     /locus_tag="VIS53_06240"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5767415.1"
                     /translation="MAGFSLLLSIIVGIPLGIVASRGGAVGHVILGFAGIVQTIPSLA
                     LLALLVPLPFFGISIRTAIAALFLYGLLPIVRNTATGLQDIPRALRESAVALGLSPIV
                     RLWKIYLPIASRSILSGIKTSAVINIGTATLAALIGAGGLGEPIISGLNLNDHMTILE
                     GAIPAAVLALLVQWSFDLLDRVLIPKGLRI"
     gene            2246..>2431
                     /locus_tag="VIS53_06245"
     CDS             2246..>2431
                     /locus_tag="VIS53_06245"
                     /inference="COORDINATES: protein motif:HMM:NF025930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767416.1"
                     /translation="MKAIRYGLAAIKNVGEGAMASAIAERERRGDFTSLEDFCSRLDS
                     RIGNRKIIESLVKAGAFD"
BASE COUNT          564 a          681 c          678 g          508 t
ORIGIN      
        1 atcacttggt tataagcgaa acggctttcg cttcacaaaa gatctctcga ccgttgcgac
       61 gtcgaaataa ggcttgtgcg tcttgagcga tttgacgctc gccgccccgt tcacgaaatc
      121 cagattgtct gtgtgtttgt gaattcgcgg atgccggcag cgcccagttc gcgaccgaag
      181 cctgaccgtt tcacaccgcc gaatggcaaa cgcggatcgg aagcgaccat ggcgttgatg
      241 aaaaccattc cggcgtccag ctcggatgtg aaaagttttt gctcctcgcg atctttggtc
      301 cacgcgctcg aacccaggcc gaatgtggtg tcgttcgcga gctcgacggc agcgtaggca
      361 tcgccaacgc ggaaaacagc tgcaaccggg ccgaagattt cctcgcggta cgccggcgac
      421 tctttcggca catcgacgag aaccgtgggc tcgtagaaaa atcccggacc gtgaattcgg
      481 ttgccgccgg tcaataattt tgcgccttga gcgatggttt tctgtacctg atcatccacg
      541 cctcgcagga tttgttcggt cgtaagtgga ccgagctcag tctccggatc cattgggtcg
      601 ccaaccttga gcgcgcgcat gcgctcaacg aattgttgaa gaaattgctc gtgaatttca
      661 tcggcgataa tgaatcgctt cgctgcgata caggactgac cggtgttgat cgtgcgggct
      721 ttgaccgcag tgctcaacgc cgattcgaag tctgcgcttg gcatcacgat aaatgcatcg
      781 ctgccgccca gctcgagtac acttttcttg atttcacgtg cggccgcact cgcaacggcc
      841 gcgccggctt tttcgctacc tgtgaccgtt acggctctga cacgcgcgtc gacgatcagt
      901 ttttccacct gctccggctc gatcagcagc gtttggaaga cgccgtcttc gaatccggcg
      961 cggcaaaaga tttcttcaat ggcaagcgcg cactgcgaca cattcgatgc gtgcttaagc
     1021 aagccgacgt tgccggcaat caaagccggc gcagcaaatc gaaacacctg ccagaaagga
     1081 aaattccatg gcatcaccgc aagcacaggt ccgagcggtt gatattcgac gtaactttca
     1141 gcagcatcgg tctgcgccgg ttcctcctcg agaaatcgag caccgttctc cgcataaaac
     1201 cggcaaccac gcgcgcactt ctcgatctct gcgattgaat cgcggaacaa ttttcccatt
     1261 tcgagcgtga tgatctccgc aaacgttttc gtttcttgga aaagcagctc cgatacggcg
     1321 tgcaacaact ccgcgcgctc ggtcaaagtg gttcggcgat agctcttgaa cgctttgtcc
     1381 gcgcggctca accgtttttc aatttccgca tcgtcgaagg gcgagaattc cttcagtttt
     1441 tcgccggtag cgggattgat cgaagcaatt gccattgatt aaatgtagcg caagcttccc
     1501 agcttgcgac acggccctca cgcaagcgtg gacgctcgcg ctactctaaa ttcgcagacc
     1561 ttttggaatc aaaacgcgat cgagcaagtc aaaagaccat tgcacgagaa gcgcgagcac
     1621 agcggcggga atcgcaccct caagaatagt catgtgatca ttcaagttaa gaccgcttat
     1681 gatcggttcg cctaaaccgc cagcgccgat caacgcagcg agcgtggcgg ttccaatatt
     1741 aatcacggcg ctggttttga ttccggagag gatcgagcgc gacgcgattg gcagataaat
     1801 tttccagagg cgcacgatcg ggctgagtcc taacgcaact gcggactcgc gtaatgctcg
     1861 tgggatgtcc tgcagaccgg tcgctgtgtt gcgcacgatc ggcagcaaac cgtacaggaa
     1921 aagcgcggcg attgcggtgc gaatgctgat tccaaaaaag ggcaggggaa cgagtaaagc
     1981 gagtagcgcg agcgacggga ttgtttgtac aatgccggcg aaaccaagaa taacatggcc
     2041 aacagcaccg ccgcgactcg cgacaatgcc aagcggaatc ccgacgatga ttgaaagcag
     2101 cagcgaaaat ccagccaact ggagatgacg aagggtccag cgtgccagct tgtgcggaaa
     2161 agaatcgcct aggtcggagg aacctgagta ccccgaagat cgcggcgcca aggccgctcc
     2221 cacactgaaa gagcgcgctc ccagattgaa ggccatccgt tacggactcg ccgcgattaa
     2281 gaacgtcggc gaaggcgcga tggcctccgc gatcgcggaa cgtgagcgga gaggggactt
     2341 cacgtcgctg gaggattttt gcagtcgtct cgattctcga atcggaaaca gaaaaatcat
     2401 cgagagcctg gttaaggccg gggcctttga c
//
LOCUS       DATDAJ010000249         5294 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1420362, whole genome shotgun sequence.
ACCESSION   DATDAJ010000249 DATDAJ010000000
VERSION     DATDAJ010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420362"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1772)
                     /locus_tag="VIS53_06250"
     CDS             complement(<1..1772)
                     /locus_tag="VIS53_06250"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY5767417.1"
                     /translation="MCAAFIGLFSIFSFRLIYLQAIKHDEYAGLAAEKNVYKQIIHAE
                     RGMILDANNEVLAHNVPVETVVADATHLTDVQATVDLLNAELKISSQELAEKLNSGRR
                     YIVIKREILAVRANALREKLRAGNLRGIHFEHDATRIYPNGSMLCHVIGFTDFDRHGV
                     QGVEASMEEYLHGQDGYRFIEHNRAGQEIVPYRGQERAPRDGYQVHLTVDLGLQSIVE
                     EEIDAAMKEYSPQKATIILMRPQTGEILAIANRPNFDLNLRSEAKPEQMKNRAIIDMM
                     EPGSTFKIVAAASALNEHKMRPDSQVFCENGLWNYGGSALHDHHAYGYLTVRDILVKS
                     SNIGAAKLALSIGDQKFYEYIRRFGFGERTGIELPGEINGVIRPPQTWSKISITRIPM
                     GHEVGVTPLQMTSAMATIANGGKLVTPRIIKSVTASDGKIISSVSPVALRQVISPETA
                     KQIGDALRGVVSDQGTAAAAAVPGFIIAGKTGTAQKVNPKGGYDHGKSVVSFLGYLPA
                     DHPEFVGLVVLDDAHTSKPELNYGGKVAGPIFARVAEKAARYLDLEPHEEIRKAIPVQ
                     RVEKPKPAERLRKVPAERIALTDGS"
     gene            complement(1792..2136)
                     /locus_tag="VIS53_06255"
     CDS             complement(1792..2136)
                     /locus_tag="VIS53_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767418.1"
                     /translation="MNAASLARWIVMTAFLAFAGLAYVYLTLQLYHLGERRKAVENEL
                     ASLRTRNVDTAGQIAALISRTALQRRLKEGYLKMIPVSDSKIVRLTIPARSTDEEAIQ
                     PVVNPLPQHESK"
     gene            complement(2166..3185)
                     /gene="rsmH"
                     /locus_tag="VIS53_06260"
     CDS             complement(2166..3185)
                     /gene="rsmH"
                     /locus_tag="VIS53_06260"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:NF013919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEY5767419.1"
                     /translation="MVRQLVMNPLWIEPPAWLAINPKASEEPTESAEDLIYHRPVLQR
                     EAVELLKPKAGVLILDGTCGGGGHTEALIEGGADVLALDQDPDAVRQVADRLAHFGRR
                     IIVRQANFRYADCVLDELGIRSIGGAFLDLGVSSRQLENAERGFSLVRNGPLDMRMDP
                     QTSLTAATIVNDYSEEELTRIFREFGEEPAARRIASMIVKIRKTSPFRETLPLARTIE
                     KLVGRHGRQHPATQAFQALRMEVNDELGALEQGLRVLAPRLDRGGRIAVITFHSLEDR
                     IVKNFFRDHSKEWLDRPEWPEPRRNPDCDFALVTPKPVKPSEEEQRANPRSRSAKLRV
                     AEKIK"
     gene            complement(3190..3645)
                     /locus_tag="VIS53_06265"
     CDS             complement(3190..3645)
                     /locus_tag="VIS53_06265"
                     /inference="COORDINATES: protein motif:HMM:NF014439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767420.1"
                     /translation="MDADSQPERFYAGEFRHSIDEKNRITIPSRWRRDRPEDFILLPE
                     ATHQFLLVMSPKEFAKMGSAAETNETVSARDRRVFLRQLHSRAQHAGADRQGRLVLPD
                     ELCQKVGLKNEVALVGNRGRFEIWNLQRWKRAHEEETATYQHVAKEIGL"
     gene            3893..4396
                     /locus_tag="VIS53_06270"
     CDS             3893..4396
                     /locus_tag="VIS53_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767421.1"
                     /translation="MKRFRFASGLACALLMCGGATAFGQASTDAVRVTMSMHPDGSRT
                     VYNFDNAQHTAVSTTTDADGKVRQTIRYQLDNAGRFSTGEVSGPDGRVRLKSRYKYDD
                     AGRILEEAQSAANGTLRNKIVYSYDSAGKQTGYSVFDASGKLVSRTGGVAARPSPSPK
                     TREKTKR"
     gene            complement(4401..>5294)
                     /locus_tag="VIS53_06275"
     CDS             complement(4401..>5294)
                     /locus_tag="VIS53_06275"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HEY5767422.1"
                     /translation="LRDNHLVRIDTNILDRITIDALGKTKTVLARKDGNWTIINRNNA
                     PADAGAVRRMIDALQNERVTKFVEDVASNLPKYGLDKPQLQLTFSSFASENTAETKAG
                     EEPFATIAFGKDEGDNVYARLTDEPFVVAVHRGLLDQISPDPLRWQELSIFKFKPEQI
                     QRVSVTTDKELSLERDQNNQWHWLKGSGAINQANLQSLLTTLSNLYAVRWLGTTTSQQ
                     GFDKPQLVLSFTTSADNKTSHKLTVGAQNNDGTFCARMDGRDGTFAVRGSDFNNLKLP
                     LETQGTASPSLTTAPSPSATP"
BASE COUNT         1089 a         1487 c         1460 g         1258 t
ORIGIN      
        1 gaaccatcgg ttaaggcgat tcgttccgcc ggcaccttgc ggagtcgctc tgccggcttt
       61 ggtttttcga ctcgctgaac gggaatcgct ttgcgaatct cctcatgcgg ctcaagatca
      121 agatagcggg cggccttttc ggcgacgcgg gcaaaaatcg gcccagcaac tttcccgccg
      181 taattcaatt caggtttgct cgtgtgtgca tcgtccagca cgacaagccc gacaaactca
      241 ggatgatccg ccggtagata gccgagaaac gaaacgacgc tcttcccgtg gtcgtatccc
      301 cctttcggat tgaccttttg cgcggttccg gttttcccgg caatgataaa cccaggcaca
      361 gcagcggctg cggcggttcc ttgatcgctc acaacgccgc gcaacgcatc accaatttgt
      421 ttggcagttt caggagaaat cacctggcgc agtgcgacgg gcgaaactga gctgattatt
      481 ttgccgtccg atgccgtgac cgattttata atccgcggtg tcaccagttt gcctccgttg
      541 gcgatcgttg ccatcgccga tgtcatctgt aatggcgtga cgccgacttc gtgccccatc
      601 ggaatgcgag tgatggaaat tttgctccac gtttgcggcg gccgaatcac tccgttgatt
      661 tcacccggca gctcaattcc ggtgcgctcg ccaaatccaa agcgccggat gtactcgtag
      721 aatttttggt cgccgatgct gagagcaagt ttcgctgccc cgatattgct cgatttgacc
      781 agaatgtcgc gcacggtcag atagccatac gcgtgatgat cgtgcaaagc ggagccccca
      841 tagttccaga ggccgttctc gcaaaaaacc tgcgaatcag gacgcatctt gtgttcattg
      901 agggcggagg cagcggcgac gatcttaaag gtggaaccag gttccatcat gtcgatgatg
      961 gcccggtttt tcatttgttc gggcttggcc tcggagcgga ggtttaaatc aaagtttggg
     1021 cggttagcga tcgccagaat ttcgcctgtc tgcggccgca ttagaatgat cgtcgccttt
     1081 tgtggagaat actccttcat cgccgcgtcg atttcctcct cgacgatgct ctgtaaccca
     1141 agatcgacag tcagatgcac ctggtaaccg tctcgcggag cgcgctcctg cccgcgataa
     1201 ggcacgatct cctggccagc gcggttgtgc tcgatgaaac ggtagccatc ttgtccgtgg
     1261 aggtattctt ccattgaggc ttcaacgccc tggacgccgt gccgatcgaa atccgtaaac
     1321 ccaatcacgt ggcaaagcat cgaaccgttg gggtagatgc gcgtggcgtc atgctcgaag
     1381 tggattccgc gcagattgcc ggcgcggagt ttttcacgca gcgcatttgc tcgcaccgcg
     1441 agtatctcgc gtttgatgac gatgtagcga cgaccgctgt ttaatttttc ggcgagttct
     1501 tgggaggaaa tcttcagctc ggcgttcagg agatcaacgg ttgcttgcac atcggtaaga
     1561 tgcgtggcgt cggccacgac tgtttccaca ggaacgttgt gcgcgagaac ttcattgttc
     1621 gcgtccaaga tcatgccgcg ttcggcgtga atgatctgct tgtaaacgtt tttttcggca
     1681 gcgagcccgg catattcgtc gtgcttgatt gcctggagat aaatcaggcg aaacgaaaag
     1741 atgctgaata ggccgataaa agcagcacac actagagcgc aacgagttcg gctacttgga
     1801 ttcatgttgc ggtaaggggt tcactacggg ttgaatcgcc tcttcgtcgg tcgatcgcgc
     1861 cggaattgtc agccgcacga tctttgaatc cgaaacgggg atcattttca ggtacccttc
     1921 tttcaagcgg cgttgcaaag ccgtgcgcga gatgagcgcc gcgatctgtc cggcggtgtc
     1981 aacgtttcga gtgcgcagcg acgcgagctc gttctcaact gcctttctgc gctcgccaag
     2041 gtgatatagt tgcagcgtca aatacacata agccaagccg gcaaatgcga gaaatgccgt
     2101 catcacaatc cagcgcgcca gcgaggcggc gttcacagta ttgcaatttc gtcgacgtga
     2161 tcggttcatt tgatcttctc cgctacgcgc aacttcgcgc tccgagatct gggattcgca
     2221 cgctgttctt cctcgctcgg cttcacgggt ttcggcgtaa caagggcaaa gtcgcagtcg
     2281 ggattccgcc gcggctcagg ccattcgggt ctgtcgagcc attccttgct atgatcgcga
     2341 aagaagtttt tcacgatccg gtcctccaga gaatggaaag tgatcaccgc gatccgtccg
     2401 ccccggtcga gtcgcggagc taagacgcga aggccttgtt ccagtgctcc tagctcgtcg
     2461 ttcacttcca tgcgcaacgc ttgaaacgct tgagtggccg gatgctgtcg tccgtggcgg
     2521 cccaccagct tttcaattgt gcgcgcgagc gggagggttt cgcgaaacgg cgaagttttg
     2581 cgtattttca cgatcatact cgcgatgcgg cgcgcggccg gttcttcgcc gaactcacga
     2641 aagatgcggg tcaattcctc ttcgctgtaa tcgttcacga ttgtcgccgc tgtgaggctc
     2701 gtttgcgggt ccatccgcat gtcgagcgga ccgtttcgaa ccaaactgaa cccgcgctcc
     2761 gcgttttcga gttggcggga agaaacaccg agatcaagaa acgcgcctcc aatgctgcga
     2821 atcccgagct cgtcgagaac acaatctgcg tagcggaaat ttgcctgccg cacgatgatc
     2881 cgccggccaa aatgcgccag acggtcggcc acctgccgga cagcatccgg atcctgatct
     2941 aaagccagaa catcagcacc gccttctata agcgcttcgg tatgcccgcc gcccccgcac
     3001 gttccgtcga ggatcagcac gcctgctttc ggcttgagta gttcgactgc ttcccgctgc
     3061 aaaaccggac gatggtaaat aagatcctcc gctgactccg tgggctcttc tgatgctttt
     3121 ggattgatgg cgagccatgc aggcggctcg atccatagcg gattcatgac gagttggcgc
     3181 accatgctct tacaatccaa tctccttcgc tacatgctgg taggtagccg tttcctcttc
     3241 gtgtgcgcgt ttccagcgtt gcaaattcca aatttcaaaa cgcccgcgat tgcctacgag
     3301 cgcgacttca ttttttaatc caactttttg gcaaagttcg tccggcaaaa cgagacgacc
     3361 ctgccggtcc gcgcctgcat gttgagcgcg agaatgcagc tgacgcagga acacgcggcg
     3421 atcgcgcgcg gaaaccgtct cattcgtttc cgcggccgag cccattttcg cgaactcctt
     3481 tggcgacatg accagcagaa actggtgtgt cgcttcaggc aaaagaatga aatcctcagg
     3541 acgatcgcgt cgccaacgcg atgggattgt aatccgattc ttctcgtcaa tggaatgccg
     3601 gaactctcca gcatagaagc gttcgggttg ggaatcggcg tccattggtc gcgtggagta
     3661 atagcccact ttactccact tgaccccacc tttaaccacc tccgcaggaa acggtcaata
     3721 aaaatcttca gtcgatttag tcctcgttaa attgtgtcaa gtcagccagg agacgtcgcc
     3781 tccgttcgca cacgagagga ggggaagtgc gggttacttg gttcccgctg ccatgacatc
     3841 cacgaacgtt ctgttgcgcc gccgcagcgg aattcgtaag ctcgtctgaa tcatgaaacg
     3901 tttccggttc gcgtccgggc tcgcctgcgc tcttctcatg tgtggcggcg cgaccgcatt
     3961 cggccaggct tcgactgacg ccgtgcgagt cacgatgtcg atgcacccgg atgggtcacg
     4021 cactgtttac aacttcgata acgcacagca cacagcagtg tccacgacaa cagatgcgga
     4081 tggcaaagtt cgtcagacga ttcgttatca actcgataat gctggccggt tctcgaccgg
     4141 agaagtttcc ggcccggatg gccgcgttcg gctcaagagc cgttacaagt atgacgacgc
     4201 aggtcgcatt ctggaagaag ctcaaagcgc agccaacggc acgcttcgga ataagatcgt
     4261 ttacagctat gactcagcgg gcaagcaaac gggttactct gtctttgacg cgtccggcaa
     4321 attagtcagc cgcacaggcg gcgtggctgc ccgcccatct ccatcgccaa agacgcgcga
     4381 aaaaacgaag cgatgactgg ttagggcgtt gcgctcggac tcggcgccgt tgttagcgaa
     4441 ggggacgccg tgccttgcgt ttcaagcggc aatttcaaat tgttgaagtc ggaaccgcgg
     4501 accgcaaatg tgccgtcgcg tccgtccata cgtgcgcaaa atgtgccgtc gttgttttga
     4561 gcgccaacgg tgagtttgtg tgatgtcttg ttgtcggctg aagtcgtgaa gctgagcacg
     4621 agttgtggtt tatcgaaccc ctgctgagac gtagtcgttc cgagccagcg caccgcatac
     4681 aagttcgaca gggttgtgag cagcgattgc aaattggcct gattgattgc gccgcttcct
     4741 ttcagccaat gccactggtt gttttgatca cgttctaacg acagctcttt gtcagtcgtt
     4801 acacttaccc tctgaatctg ctcaggctta aatttgaaga tcgacaactc ctgccatcgc
     4861 agcggatcgg gtgaaatctg atcgagcaac ccgcgatgca ctgccaccac aaatggctca
     4921 tccgtgaggc gcgcgtaaac gttgtcgccc tcatcttttc cgaaggcaat tgtggcgaac
     4981 ggttcctcgc ccgctttagt ttcggccgtg ttctctgagg caaatgaact gaaggtcagt
     5041 tgcagctgcg gcttatcgag gccgtacttc ggcagattgg aagcgacatc ttcgacgaat
     5101 tttgttaccc gctcgttttg cagcgcgtcg atcatgcgcc gaactgcgcc tgcatccgct
     5161 ggcgcattgt ttcggttgat gattgtccaa ttcccatctt tgcgcgcgag aacggttttg
     5221 gttttgccca gcgcgtcgat cgtgatccga tcaagaatat tagtatcgat ccgaaccaaa
     5281 tggttgtccc gcaa
//
LOCUS       DATDAJ010000250         6232 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1421548, whole genome shotgun sequence.
ACCESSION   DATDAJ010000250 DATDAJ010000000
VERSION     DATDAJ010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6232)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6232)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6232
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1421548"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(480..665)
                     /locus_tag="VIS53_06280"
     CDS             complement(480..665)
                     /locus_tag="VIS53_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767423.1"
                     /translation="MDRGTGVDLGVVVAVGVGVAGAVAVAVAVAVGVAVELAVAVGVA
                     VGVGEPDGAQYLPPVLK"
     gene            917..1363
                     /locus_tag="VIS53_06285"
     CDS             917..1363
                     /locus_tag="VIS53_06285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Minf_1886 family protein"
                     /protein_id="HEY5767424.1"
                     /translation="MQKIGFAEALESVVGSDPRYQRDGYIFLRDALDFTTKQQKKVKG
                     VSVRHVSGPELLNGVRQYALKEFGPMVMTVFDSWGIRSCEDVGHMVFNLIGAGVFGKT
                     EQDSIEDFKNVYDFEEAFVKPFAPAKPETVKPLAQLPASKPATSSK"
     gene            1516..4086
                     /locus_tag="VIS53_06290"
     CDS             1516..4086
                     /locus_tag="VIS53_06290"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY5767425.1"
                     /translation="MVNLKAASPESPVRISFPPNTAQKWILPNGLTVIVQEDHSAPVA
                     SVQAWCATGSINEDQHLGAGLSHILEHMLFKGTKTQSANQIAQSIQDVGGYINAYTSF
                     DRTVFWIDVPKDGVARALEALSDAMMNSTLPPEEYQKEQEVIRREFAMGMDDPDRMAS
                     LLLFGTAYQRHPYRFPVIGELEIYNQLTQEQVMQYYKTRYVPNNLTFVVVGDVDAEKV
                     RQQLGDLFKPYPEKSLKPVFIPSEPPQLGRREVHREFSTELTHLAMAWHIPEVTSPDV
                     PALDLLSTILGDGRSSRLYRRVREEAGLAFSISAFSYTPGDPGLFGIDATLDPKKREA
                     AEQLALQIIDEVKRNGVTADELEKARKITLGQHLGALTTMRGQASDTGSNWLLTRDLN
                     FSRQYLDAVQKVTLDDVKRVARTYLTENNLTVVSLNPKGSLSGKAEAVKPVAAGEIQR
                     FELSNGLRLLVREDHRLPLVGMGAVFRGGLLAENPEDNGVTRLMAKVLLKGTKTRTAE
                     QIANELESVGGSISSDAGNNSFSVSVDVMKPDVKLGVDLLSDVLLNATFPEKAVAREK
                     EIQIAAIQQEEEQLTSVARNIMRQALFPQHPYALRSNGSVEAVQHLTQKDLIDFRDRY
                     VVAKNGVIYVFGDVKGAEIRQLIEQTLGNMQAGALALTDAKPSKPLSKSETVESRKDK
                     AQGVLMIGFRGASLSSPDRYALELIDEASSDLGSRFFVRIREKMGLAYYVGAAQMQGL
                     VPGLFSFYLGTDPQKLERVKTEFLDEIHKLANEGLTAVELERAKKKLIGQQEIANQSN
                     DAFGYHCALDELYGLGFDYYKRLEHDVNAVTLDDIKKVATKYFRDQPYVLATVQPPQK
                     "
     gene            4169..4639
                     /locus_tag="VIS53_06295"
     CDS             4169..4639
                     /locus_tag="VIS53_06295"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HEY5767426.1"
                     /translation="MPEVQKTVQTGEMTQRFIEFVMMHAQNAALFLGQIPNPKTGEAE
                     VNLDLARMFIDQLEMIQEKTRGNLTNEETMVLRNALSNLQMAFVEVSGGAQPEPARGG
                     EGPQDTAAQPEPPPHASSQPAKQSASGPAEQKPPISSAEPETESRKKFTKSYGP"
     gene            4753..5397
                     /locus_tag="VIS53_06300"
     CDS             4753..5397
                     /locus_tag="VIS53_06300"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY5767427.1"
                     /translation="MRTVFRIETASLVLRPLVPGDTQRMLEMSQEDCARRWLPSQIYR
                     DKRHAGTAIEYLIGQFNLDASPTTNAFVFGVEEKVTGRLIGHVGLSPFFDSVEVGFGI
                     ATSEQRKGYATEGVARVCAWALERFSLPAIVGVTDKENVASQRVLIRCGFSRKEEKLM
                     RLQGVDRPAVVFELAKKEPNQSAVAHRRPALQSDGSGEFARDCCSRPGVSGGGR"
     gene            5416..5673
                     /locus_tag="VIS53_06305"
     CDS             5416..5673
                     /locus_tag="VIS53_06305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767428.1"
                     /translation="MKTAVRLTFIAMILSTMFFSFGCEKKTAITDAPAQNTPGSTKLL
                     EAADLVGYDGKRLRKSIDHVKEANEKHNQDMEKMAGSGPEQ"
     gene            complement(5739..>6232)
                     /locus_tag="VIS53_06310"
     CDS             complement(5739..>6232)
                     /locus_tag="VIS53_06310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767429.1"
                     /translation="EVIKPVANEATNTMKDLQNTAQNLNKLTDENSELNLALTQFKTF
                     GEHLSGLTGPDSALSHSLTNIEKISTSLTENDNIEVTLQNLRSSSEKLKVATTELQPA
                     GENIKQFSETIKTQPWRLIWPSTKKYAEASSSPTPGQGTITVRKTAKAKPRATPRTRT
                     SSR"
BASE COUNT         1440 a         1639 c         1812 g         1341 t
ORIGIN      
        1 aatgatcgtc tggggtgggg ttccaccggc cctaccttag tgaacaccgg cggcaggtac
       61 aatcccagca ccgacagttg gacagccacc agcaccacca acgcgccggg tgcccggtca
      121 ggccacacgg cagtatggac tggcagtgaa atgatcgtct ggggcggcgg tgttggccct
      181 acctttctga acaccggcgg taggtacaat cctggcgccg acagttggac cgcgaccacc
      241 actgccagcg cgccccctgt ccgaggctat catacggcag tctggaccgg ccatgagatg
      301 atcgtctggg gtggatggga tggcccgcag catgttttca acaccggcgg caaatacgat
      361 ccaagtacga acagttggac agcccccagc gtcaccaacg cgcctactgc ccgatacgct
      421 cacaggacaa tttggaccgg gagcgaaatg atcgtctggg gcggatttaa ttctcccaat
      481 tatttcaaca ccggcgggag atactgcgcg ccatctggtt caccgacgcc aacggcgact
      541 ccaactgcaa cagcaagttc gactgctaca cccacggcaa ccgcgaccgc gacggctact
      601 gctcctgcga cgccgacacc tactgcaaca acaacaccga gatctacacc ggtcccgcga
      661 tccacgccta ccccagcacc acgcccatag cggacgcctt aaaaaaatcg aggtttggta
      721 gggcgcgacc gccggacgcg ccggattgtt caacgaagtg tcggctcggc gagccgtccc
      781 taccatttgt gtgatgggat gcgaataaat tactaggttc agcgaagaca cgatttcgtt
      841 tgttgctgag gggttgctcc ttccggcttt gccgattatc tttcgcggcg cgttttgaaa
      901 cgcgcgtttt ctgtttatgc aaaagattgg attcgccgaa gctctcgagt ctgttgtggg
      961 cagcgacccc cgctatcagc gggacgggta tatctttttg cgcgacgcgc tcgacttcac
     1021 gaccaagcaa caaaagaaag tcaaaggcgt cagcgtgcgt catgtgagcg ggccggaatt
     1081 gctcaatggc gtccggcagt acgcgctcaa ggaattcggc ccgatggtga tgacggtatt
     1141 cgatagctgg gggatccgtt cctgcgaaga cgtcgggcac atggttttta atctgatcgg
     1201 cgccggcgtt ttcgggaaaa ccgagcagga ttcgatcgag gactttaaaa acgtttacga
     1261 tttcgaggag gcgtttgtga aaccgttcgc accggcgaaa ccggaaactg tgaaaccgct
     1321 ggcgcagttg cccgcgtcaa agccagccac gtcgagcaag tgaattctgg cttcgccacc
     1381 ttgaattgtt aaaccgttga atcgtgaatc gtaaagtcga tgtgacgttg taacgattta
     1441 acgaatcacc cgggcttgac cctaatgtat tgcaacccag tagcgagttt tctcacagcg
     1501 gctctattat ttgccatggt caatttgaag gctgcatcac ctgaatctcc ggttcggatt
     1561 tcgtttccgc cgaacaccgc acaaaaatgg attttgccaa acgggctgac cgtcatcgtg
     1621 caggaagacc acagtgcgcc ggtagcgagt gtgcaggcgt ggtgcgcgac cggaagcatc
     1681 aacgaagatc agcatctcgg cgcggggtta tcccacattc tagaacacat gctgttcaaa
     1741 ggaacgaaaa cgcagtctgc gaatcaaatt gcgcaaagca tccaggacgt cggaggttac
     1801 atcaacgcct atacctcttt cgatcgcacg gttttttgga tcgacgtgcc gaaagatggg
     1861 gttgccaggg cgctggaggc gctgagcgac gctatgatga attccaccct gccgccggag
     1921 gaataccaaa aggagcagga agtaatccgg cgcgaattcg ccatgggcat ggacgatccc
     1981 gatcgcatgg cgagcttgct gctttttggc acggcgtatc agcggcatcc gtaccggttc
     2041 ccagtcatcg gcgagctcga gatctacaac caactcacgc aggaacaggt gatgcagtat
     2101 tacaaaaccc gttacgtgcc gaacaatctc accttcgtgg ttgtcggcga tgtggatgcg
     2161 gaaaaagtgc ggcaacaact gggcgacttg tttaaaccgt atcccgagaa atcgcttaaa
     2221 ccggttttca ttccttcaga accgccacaa cttggccggc gagaagtcca ccgggaattt
     2281 tcaacagagc tgacacatct ggcgatggcc tggcacatcc cggaagtcac gagtccggat
     2341 gttcccgcgc tcgatttgct ctcgactatt ctcggcgatg ggcgcagctc gcggctttac
     2401 cggcgcgtgc gcgaagaagc cggtctcgca tttagtatat cggcgttttc ttatacgccg
     2461 ggcgatccgg ggttgtttgg catcgacgcc actctcgacc cgaaaaagcg cgaagctgcc
     2521 gaacaactgg cgttgcaaat catcgatgag gtgaaacgga acggcgtgac cgcggacgaa
     2581 ttagaaaagg cgaggaagat cacgctcggt cagcatctcg gtgcactgac cacgatgcgc
     2641 ggtcaggctt cggatactgg ttcaaactgg ttgctgacgc gcgatctgaa ttttagtcgc
     2701 caatacctgg acgcggtcca gaaagtgacg ctcgacgacg tcaaacgcgt cgcccgcact
     2761 tatctaaccg agaacaacct gacggtggtg tcgttaaatc cgaaaggctc cttgagcggc
     2821 aaagctgagg ccgtgaagcc ggttgccgcg ggtgagattc agagattcga actctcaaac
     2881 ggattgcgat tgcttgtgcg tgaagatcat cggttgccgc tcgtggggat gggcgccgtg
     2941 tttcgcggtg gcttgctcgc tgaaaatcca gaggacaacg gcgtcacgcg attgatggcg
     3001 aaagtgctgt tgaagggaac gaagacgcgt actgccgagc aaattgcgaa tgagctcgaa
     3061 tcggtgggcg gttccatttc gagtgacgcg ggcaacaatt cgttcagcgt gtcagtcgat
     3121 gtcatgaagc ccgatgtgaa attgggcgtg gacctgctct cggacgtgtt gctcaacgcc
     3181 acgttcccgg agaaagccgt cgcgcgcgaa aaagagatcc agatcgctgc gatccagcag
     3241 gaggaagaac aattgaccag cgtcgcgcgc aacatcatgc gacaagcgct ttttccgcag
     3301 cacccatacg ctttgcgttc gaacggctcg gtcgaagccg tgcagcacct gacgcaaaaa
     3361 gatttgatcg attttcgcga tcgctacgta gtcgcgaaga acggtgtgat ctacgtcttt
     3421 ggcgatgtta aaggagccga gataagacaa ctcatcgagc aaacgctcgg aaacatgcaa
     3481 gctggcgcac ttgctctgac agacgcaaag ccgtccaagc cgttgagcaa atcggagacg
     3541 gtcgaaagcc gcaaggacaa ggcgcagggg gtactcatga tcggcttccg cggcgcgagc
     3601 ctgtccagtc ccgatcggta cgcgctcgaa ctgatcgatg aggcaagtag cgatctcggg
     3661 tcgcgattct ttgttcgcat ccgcgagaaa atgggtctgg cctattacgt gggagccgct
     3721 caaatgcagg gtctcgtgcc tgggttgttt tcattttatc tcggcaccga tccgcagaag
     3781 ctcgagcggg tgaaaaccga gttcctcgac gaaattcaca agctcgcgaa cgagggtctt
     3841 accgcggtgg aattagagcg ggcgaaaaag aaattgatcg gccaacaaga aatcgccaat
     3901 caaagcaacg acgctttcgg ttatcactgc gcgctcgacg aactttacgg cctcggcttc
     3961 gattactata agcgactcga gcacgacgtg aacgccgtga ccctcgacga catcaaaaaa
     4021 gtggctacca agtattttcg cgatcaaccg tatgttttgg caacggtgca accgccacag
     4081 aaatagttgc cagttgaaag ttcgtagttg atagaaactt ggctgtcgta gctatcaaca
     4141 atcaaccctc aactatcaac cttctgcaat gcctgaagtc caaaaaactg ttcagaccgg
     4201 tgagatgacc cagcggttca tcgaattcgt gatgatgcac gcgcaaaacg cggcgttgtt
     4261 cctcggtcaa attccaaatc caaaaaccgg cgaagccgaa gtcaatctgg atttggccag
     4321 gatgttcatt gatcaactgg aaatgattca ggaaaaaacg cgcggcaacc tgacaaacga
     4381 agaaacgatg gttctgcgca acgccctttc caatttgcag atggcatttg tggaagtctc
     4441 tggtggggca caaccggagc ctgctcgcgg tggcgagggc ccgcaggaca ctgccgcaca
     4501 acctgaaccg cctccgcacg cgtcctcaca accggcaaaa caatcagcct caggccctgc
     4561 agagcaaaaa ccgccgatct catcagctga gcccgagaca gaatcgcgga agaaattcac
     4621 caaaagctac gggccatagc tcgattcagc ttctcaagaa ttattctcgc ggtgcgcccg
     4681 ctgcggtccg aaggtctgcg tctataatgg aattaggcct aaagagtccg tgtaacgctc
     4741 gttgggctac gaatgagaac agtctttcgc attgagacag cgtcgttggt gctgcggccg
     4801 ctcgtgcctg gcgacactca gcgcatgctc gaaatgagcc aagaggactg tgcgcgtcgg
     4861 tggctgccga gtcagattta ccgagacaag cggcatgccg gcacagcgat cgagtatctg
     4921 atcggtcagt tcaacttgga tgccagcccg acaacgaatg cgttcgtctt tggggttgag
     4981 gagaaggtga ccggtcggct gatcggacat gtcggcctga gtcctttctt cgacagcgtt
     5041 gaggtgggtt ttggaattgc cacatccgag cagaggaagg gttacgcgac ggagggcgtt
     5101 gccagggttt gtgcctgggc gctggaacga ttctcactcc ccgctatcgt gggagtgaca
     5161 gataaggaga acgtggcttc gcagcgagtg ctgatccgct gcgggttcag tcgaaaagag
     5221 gagaagctga tgcgcttgca gggcgtagat cggccggcag tcgtctttga gttagcaaag
     5281 aaggagccca accagagcgc tgtagcgcac cgccgccccg ctttgcagtc ggacggttcg
     5341 ggagaatttg ctcgcgactg ttgcagccga ccgggcgttt ccggcggcgg tcgctgaggt
     5401 tgggtcgtta ggccgatgaa aaccgcggtt cgtttaacgt tcattgcaat gattttgtcg
     5461 acgatgtttt tttcattcgg atgtgagaag aaaactgcca tcacagatgc ccctgctcaa
     5521 aacacacctg gaagtacaaa actcctggag gcggcagatc tggttgggta cgatggaaaa
     5581 agactcagga aaagcatcga tcacgtcaag gaggccaacg agaagcataa ccaagacatg
     5641 gaaaagatgg ccggaagtgg gcctgagcag taacgcgcgg tatagaactt cagtgagctt
     5701 gccacagggc cgccgtagcg tacgtcttgt gaatcgcgtt atcggctgct cgtccgcgtt
     5761 ctgggagtag cccgcggttt tgctttcgcg gttttacgta cagtgattgt tccctggccg
     5821 ggagtgggag atgatgacgc ttcggcgtac ttttttgttg agggccaaat cagacgccag
     5881 ggctgagttt taattgtctc gctgaattgc ttgatgtttt caccggccgg ctggagttcg
     5941 gttgttgcta ccttcaattt ctctgacgac gatcgtaggt tttgcagggt cacctcgatg
     6001 ttgtcgttct ccgttaggct ggtgctgatt ttttcgatgt tggtgagcga atgcgacagc
     6061 gcgctgtcgg gcccagtcag cccggagagg tgttcgccga atgttttgaa ctgggtgagc
     6121 gcaagattca gttcggagtt ttcgtcggtg agtttgttga gattttgagc ggtgttctga
     6181 agatctttca tggtgttggt cgcctcgttg gcaacaggtt taatgacctc ca
//
LOCUS       DATDAJ010000251         6965 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1425056, whole genome shotgun sequence.
ACCESSION   DATDAJ010000251 DATDAJ010000000
VERSION     DATDAJ010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6965
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1425056"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1243)
                     /locus_tag="VIS53_06315"
     CDS             complement(<1..1243)
                     /locus_tag="VIS53_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5767430.1"
                     /translation="MRNGQTIESYVPARLDALPWSSWHWLIVVSLGATWILDGLEVTL
                     AGALGGVLTRHETLGLSDAQVGASATCYLAGAVIGALLFGYGTDRFGRKKLFFITVAV
                     YLIGTALSGFSWNFWSYALFRAITGAGIGGEYAAINSAIDELIPARVRGRVDLIINGS
                     YWIGAAMGAAATLVLLDPRYIPIWLGWRCAFGIGATLGLIVIFFRRWIPESPRWLMIH
                     GRNHQAEEIVAGVERKIHGADDSASAGRRYSELFPTRIRTRTHTPWREIWNAIVHEHR
                     RRSFLAFVLMSTQAFFYNAIFFTYALVLMRFYGVPEKDVGGYLLPFALGNVLGPLLLG
                     HLFDTIGRKQMITRTYALAGVLLAVTGWLFHAGSLTAQTQTLAWTIIFFVASAAASSA
                     YLTVSEIFPLEIRGMAIAIFFA"
     gene            complement(1426..2211)
                     /locus_tag="VIS53_06320"
     CDS             complement(1426..2211)
                     /locus_tag="VIS53_06320"
                     /inference="COORDINATES: protein motif:HMM:NF015438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HEY5767431.1"
                     /translation="MSIVGKVDSLWRYPVKSMRGEELEEAFAGYPGIYGDRVFAFKSS
                     ASPAGFPYFTAREQRRLLQYRPRFRYPDKAARPVNLTEADSMGAGPLSADISELMVDI
                     ESPEGKTLAIDDPVLIEMLRSDVDAKHQLTLMRSHRAMTDCRPVSIFSLQSARQLSEE
                     TETPIDKRRFRANLYLDLASDNGFGENELVGRSLKIGPKVIVRVLERDPRCAIITLDP
                     DTSEKTPAVLKKVAQAHEGTAGVYGAIFVEGMLHNGDTVEVLD"
     gene            complement(2349..3065)
                     /locus_tag="VIS53_06325"
     CDS             complement(2349..3065)
                     /locus_tag="VIS53_06325"
                     /inference="COORDINATES: protein motif:HMM:NF011765.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase family protein"
                     /protein_id="HEY5767432.1"
                     /translation="MRQTTFAIGFVSVAFTVSASALAQTSADTAGKKAPAVQTSESQA
                     GMTPTSALEKLKKGNARFVEKNMRSRDWLAKVSATAGGQYPFAVILACMDSRAPIEII
                     FDQGIGDVFGIRIAGNVVNEDVLGSMEYATKVVGSKVIVVLGHTSCGAVKGSIDDAKL
                     GNLTELLAKIRPAVTTSGPGSAKDDAYVNKVAEANVSQAMKEIREKSPTIKAQLDAGT
                     VGLVGAIYDVSTGKVTFLPE"
     gene            complement(3161..4582)
                     /gene="glnA"
                     /locus_tag="VIS53_06330"
     CDS             complement(3161..4582)
                     /gene="glnA"
                     /locus_tag="VIS53_06330"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEY5767433.1"
                     /translation="MTKDTTPSDVSKMIKDHGVKLVDFKFTDLPGTWQHFTTTLTEYN
                     EDIFTDGLGFDGSSIRGWKVINASDMLVIPDPATAWIDVFNAEPTLSLICTIVDPITR
                     EPYDRDPRGVAEKAEAYLKSTGIADTAFIGPEAEFFIFDDVRFANSGNAASYVVDSVE
                     GHWNSAREEFPNLGYKIRAKEGYFPVSPMDTLQDIRNEMCLELEKAGVAIERQHHEVA
                     TAGQAEIDIRYAPLKRMGDNMQYYKYILRNVAKRHNRSVTFMPKPIFGDNGSGMHTHI
                     SLWKDEKPLFAGNGYAGLSDIALFFIGGILKHAPALTCLTNPTTNSYKRLVPGFEAPV
                     NLAYSARNRSAAIRIPTYSPSPKAKRIEFRTPDAAANPYLAFSALLLAGLDGIQNRMD
                     PGDPLDKNLYELPPEELAQVASVPDSLRGAIEALQADHSFLLRGDVFNENFIANWIDM
                     KQKEYDALRLRPHPYEFAMYYDV"
     gene            complement(4735..5073)
                     /locus_tag="VIS53_06335"
     CDS             complement(4735..5073)
                     /locus_tag="VIS53_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019517557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY5767434.1"
                     /translation="MKKLEAIIKPFKLEEVKEALAELGIEGMTVTEVKGFGRQKGHTE
                     IYRGSEYTVDFLPKVKVEVVMADDLIDKAVNVVVAAAKTGKIGDGKVFVLPVEHAVRI
                     RTEEIGEKAV"
     gene            5469..>6965
                     /gene="dnaE"
                     /locus_tag="VIS53_06340"
     CDS             5469..>6965
                     /gene="dnaE"
                     /locus_tag="VIS53_06340"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEY5767435.1"
                     /translation="MSRDSFVHLHLHTEYSLLDGSIRMKDVMKKASEFRMPAVAITDH
                     GNLFGAIEFYQEAQRAGVKPIIGCEVYVAPGSHKDRPPSRRESAYHFTLLAENETGYR
                     NLVKLVTAAHLDGFHYAPRIDKEMLAARSEGLIGLSGCLAGEINSAIQANNIEKAKQS
                     AVEYRDILGAENFFLELHDHGMEEQKMCNTALVHMARDLGVGLVAANDVHFLRRSDHE
                     AHDVMLCIGTGKMVQDESRMHYLPELYFKSPDEMRQLFRDFPEAITNTLHIGERCHVD
                     LDFGSSKYPEYPVPAGQTREGYLRGLCYQGLRARYGERATADAELTRRLEYELGVLEK
                     TGFVSYLLIVWDFIHFAKEKGIPVGPGRGSAAGSIVAFVLGITDIDPLQFGLIFERFL
                     NPDRVSPPDIDVDFCEARRGEVLEYVRQKYGARRVAQIITFGKLKAKSVVRDVARVLG
                     WSYRDADRIAKMIPNELNITLDTAAAKNAELKRAIASEPPTRQLFEHAK"
BASE COUNT         1549 a         1913 c         1914 g         1589 t
ORIGIN      
        1 ctgcgaagaa aattgcaatc gccattccac gaatttccaa gggaaaaatt tcgctcacgg
       61 tcaggtaggc ggaactggcg gccgccgaag ccacgaaaaa gataattgtc cacgcaagcg
      121 tttgcgtttg ggcggtgagc gatccggcat gaaaaagcca gccagtcacc gcgagcaata
      181 ctcctgcgag cgcatacgtt cgagtaatca tttgtttgcg cccgatcgta tcgaacagat
      241 gcccaagcag cagcggcccg agcacatttc caagcgcaaa cggcagaaga taaccaccga
      301 cgtctttctc cggcacgccg tagaaccgca tcaacacaag cgcatacgtg aaaaagattg
      361 cgttatagaa aaatgcctgg gttgacatga gcacgaaagc aagaaacgaa cgtcgccgat
      421 gttcgtgcac aatcgcgttc cagatctcgc gccagggcgt atgcgtgcgg gtgcgaatgc
      481 gcgtcgggaa cagctcgctg tagcggcgtc ctgcggacgc cgaatcgtcg gcgccatgaa
      541 tttttcgttc cacgcccgca acgatctctt ccgcctggtg atttcgccca tgaatcatca
      601 accagcgcgg actctcagga atccagcggc gaaagaaaat aacgattaat cccagcgtcg
      661 cgccgattcc gaatgcgcat cgccatccaa gccagatcgg aatgtagcgc ggatcgagca
      721 acacgagcgt ggcagcagcg cccatcgcag cgccgatcca gtatgagcca ttgatgatca
      781 aatcaacgcg gccacgcaca cgcgctggaa tcaattcgtc aatggccgaa ttgatcgccg
      841 cgtattcgcc gccaatgccc gctccggtga ttgcgcgaaa cagtgcgtag ctccagaaat
      901 tccaggagaa acccgagagg gctgtgccga tcaggtaaac cgcaaccgtg atgaagaaca
      961 attttttgcg gccaaaccga tcggtcccgt agccgaaaag cagcgcaccg atgactgcgc
     1021 ccgccaaata gcaggtcgcg ctcgcaccta cttgcgcgtc gcttaatccg agcgtctcgt
     1081 gacgcgtcaa aactccaccc aacgctccgg ccaatgtgac ttccagacca tccaggatcc
     1141 atgtcgcgcc gagggaaacc acaatgagcc aatgccacga gctccacggc aaggcatcta
     1201 accgggctgg aacataggat tcaatcgttt ggccgtttcg catccgccag tcttttcgcg
     1261 caaagaaacc gctgacgcaa aacgcgatcg ttatgcgtga tcgtaacctg acctcaatcc
     1321 tctccctgcc agggagaggc ggacgcgtta gcgccaggtg agggtggggc gattccgcta
     1381 atctttcgca cctgcattcc tcgcgagctt ggccgttgtc agatcctaat ctaagacttc
     1441 gaccgtgtcg ccgttgtgca gcatgccttc gacgaagatt gcaccgtaca caccagcagt
     1501 gccttcatgc gcttgcgcta cttttttcag taccgctggt gttttctctg acgtgtcggg
     1561 atcgagcgtg attattgcgc agcgcggatc acgttccaaa actctgacga ttactttcgg
     1621 cccgatcttc aatgaccggc cgacaagttc gttttcaccg aagccgttat cagaagccag
     1681 atccagatac aggtttgccc tgaaccgccg cttgtcgatc ggcgtttctg tttcttcaga
     1741 cagttgccga gctgattgca aactgaagat cgacaccgga cggcaatcag tcatggcccg
     1801 gtgcgatcgc atcaatgtga gttgatgctt cgcgtcgaca tcactgcgca gcatctcgat
     1861 aagaaccgga tcatcgatcg caagcgtttt tccctccgga ctttcaatat cgaccattag
     1921 ctctgaaatg tcggcggaga gaggacccgc gcccatgctg tcggcttcgg tcagattcac
     1981 ggggcgcgca gctttgtcag gataacgaaa ccgcggccga tactgcagaa gtcttcgctg
     2041 ttcgcgcgct gtgaaatacg gaaatcccgc agggcttgcc gaacttttga aggcgaaaac
     2101 gcggtcgccg taaatgccgg ggtaacctgc aaacgcttcc tccaactcct cgccacgcat
     2161 gcttttgacg ggataacgcc agaggctgtc cacttttccg acgatactca tatgttagat
     2221 attatttaat aaagcgtgct gtcatgttga gcgaagcgaa acatctctgg tctgtttccg
     2281 atgatgcagg cgtgcccaaa ttgatccgag attcttcgct tcgctcagaa tgacacgagg
     2341 aaatgccctc attcgggcag gaatgtcact ttgcccgtgg agacatcgta aatcgctccg
     2401 acgagaccga ccgttccagc gtcgagctga gcctttatcg tcgggctctt ctcgcgaatc
     2461 tctttcatcg cctgagacac gttggcttcg gcgactttgt tgacatacgc gtcgtctttc
     2521 gcgcttccag ggccggatgt cgtcacggcg ggccggatct tcgccagaag ctcggtgaga
     2581 ttacccagct tcgcgtcgtc gatggagccc ttcacagccc cgcatgaggt gtgcccgagg
     2641 acgacgatca ccttcgatcc gacgaccttc gttgcatact ccatgctgcc gagcacgtcc
     2701 tcgttgacaa cgttgcccgc gatgcggatc ccgaagacgt cgccaattcc ctgatcgaag
     2761 atgatttcga tcggagcgcg agaatccatg catgcgagga tcaccgcaaa cggatactga
     2821 ccgcccgcag tcgcggagac cttagccagc caatcgcgac tcctcatgtt cttctcaacg
     2881 aagcgagcgt tacctttctt cagcttttcc aaggcggacg tcggcgtcat cccggcctgc
     2941 gattccgacg tttgaacggc cggagccttc ttgcctgcgg tgtcggcgga agtttgcgcg
     3001 agggccgatg ccgagacggt aaaagcaacg gacacgaacc cgatcgcgaa tgttgtttgt
     3061 cgcatgaatc tttcttaaat gatgtgtatc acagcatgcc tgttatgtac ggtcaattac
     3121 caccacaaat ctacgactcg tagcatgatc tttcttgtca ttacacgtcg taatacatcg
     3181 cgaactcgta cgggtggggg cggaggcgca gggcgtcgta ttctttttgt ttcatgtcga
     3241 tccagttggc gatgaagttt tcgttgaaga cgtcgccgcg gagcaggaag gaatgatcgg
     3301 cctggagcgc ttcgattgca ccgcggagtg aatcggggac gctggcgact tgcgccaatt
     3361 cttcaggcgg taactcgtaa aggtttttgt ccagcggatc gccggggtcc atgcggtttt
     3421 ggattccgtc gagccccgca agaagcagcg ccgaaaaggc aagatatgga tttgcggcgg
     3481 catcgggcgt gcggaattcg atgcgcttcg ccttcggact gggtgagtag gtgggaattc
     3541 gaatcgcggc ggatcgattg cgggctgagt aggcgagatt gaccggcgcc tcgaatccgg
     3601 gcacgagccg tttgtagctg ttggtggtgg gattggtcag gcacgtgagc gccggcgcgt
     3661 gtttcaagat tccgccaatg aaaaacagag cgatatcact gagcccggcg taaccgttcc
     3721 cggcgaaaag cggtttctcg tctttccaaa gcgaaatgtg ggtatgcatg ccgctgccat
     3781 tgtcaccgaa gatcggtttc ggcatgaacg tcacgcttct gttgtgccgt ttggcgacat
     3841 ttcgcaggat gtatttgtaa tactgcatgt tgtcgcccat gcgcttaagg ggcgcataac
     3901 gaatgtcgat ctctgcctgg ccggcagttg cgacttcgtg atgttggcgc tcaatcgcca
     3961 cgcctgcttt ctcgagttcc aaacacattt cgttgcgaat gtcctgcaac gtgtccatcg
     4021 gcgagacagg aaagtatcct tcctttgctc gaatcttgta accgaggttt ggaaattctt
     4081 cgcgcgcgct gttccaatgg ccttcgacgc tatcgactac gtatgatgct gcgttgccgc
     4141 tattggcaaa tcgcacatcg tcgaaaatga aaaattctgc ttccggccca atgaacgctg
     4201 tgtcggcgat accggtcgat ttgaggtaag cctctgcttt ttcggcaaca ccgcgcgggt
     4261 ctcgatcgta cggttcgcgc gtgatcggat cgacgatggt gcaaataagg ctcagagtgg
     4321 gttcggcgtt aaagacatcg atccacgccg tggccggatc cggaatgacg agcatgtcgg
     4381 aggcattgat cactttccag ccgcgtatgc tcgagccgtc aaacccaagt ccgtccgtaa
     4441 aaatgtcttc gttatactcc gtgagcgtgg tggtgaagtg ctgccatgtt cctggcagat
     4501 cggtgaattt gaaatccaca agctttacgc cgtggtcttt gatcattttg ctgacgtcag
     4561 atggagttgt gtctttggtc atattctgaa gttgttagtt gatggttgag agttgagaga
     4621 aataaaaagg tctcatccgc aatgattcgt gttggtgacg cttctcgcaa atgatagtcg
     4681 cccgcgacgc tgatagttcc ctcaaccatc aactctcaac tatcaacttc tgcatcaaac
     4741 cgctttttcg ccgatctctt cagtgcggat gcgcaccgca tgttcgaccg ggagcacgaa
     4801 cacctttccg tccccgatct tgcccgtctt cgccgcggcc accacgacat tgaccgcctt
     4861 atcaatcaag tcgtccgcca tcaccacttc tactttcacc ttcggcagaa aatccactgt
     4921 gtattcgctt ccgcggtaaa tttcggtgtg ccctttttgc cggccaaaac ctttgacctc
     4981 ggtgacggtc atcccttcga tgccaagctc tgcaagcgct tccttaacct cttcgagctt
     5041 gaacggttta atgatggcct ccaatttttt catgtcgcag taagcttggc gccgcgcgga
     5101 gctttccaat cgaaagccac ccgcagcacg cgctctcata gcaattgctc gacgcgaatg
     5161 caatcacgaa ttttttgggc actgatgcga gaggagtggc tgattttcaa ttgggttgac
     5221 gtggatcaga gcctgaccac aaggtcgcct ctccctcgcg aagaagaggg aagggtgagg
     5281 atttcattca gagcgactcg cgcaattggc cacgaacccc tcacctcaat cctctcccgt
     5341 gcccacgggg aaaaggcgat ggaacaacgg tcgcagggat gagttggccc atttcttctg
     5401 acttcaatcc cgccaacatg cttggcgaat ttgccaaaga ttttttttgg cgcttatact
     5461 gaaaactgat gtcccgcgac tctttcgttc accttcatct gcacactgaa tattcgctgc
     5521 tggatggaag tatccgaatg aaggatgtga tgaaaaaagc ctcggaattc aggatgcctg
     5581 ccgtggcgat taccgatcac ggcaatttat ttggcgcgat tgaattctac caggaagcgc
     5641 agcgcgccgg ggtgaaaccg atcatcggct gtgaggttta cgtggcaccg ggatcgcaca
     5701 aggaccggcc gccatcgcgg cgggaatcgg cgtaccactt cacattgttg gccgaaaacg
     5761 aaactggcta tcgcaacctc gtgaagctgg tgacggcggc gcatctggat ggttttcatt
     5821 acgcgccgcg gatcgacaag gagatgcttg cggcgcgctc ggagggtttg atcggattga
     5881 gcggctgcct tgcaggcgag atcaacagcg cgattcaggc aaacaatatc gagaaagcaa
     5941 aacaaagcgc tgttgaatat cgcgatattc taggtgcaga gaatttcttc ctggaattgc
     6001 acgatcacgg gatggaagag caaaaaatgt gcaacacagc actcgtgcac atggcgcgcg
     6061 acctcggcgt tggcttggtg gcggcgaatg acgtgcattt tctccgacgg agcgaccacg
     6121 aagcgcatga cgtaatgctt tgcatcggca ccggcaaaat ggtgcaggac gaaagccgga
     6181 tgcattatct gcccgaatta tacttcaaat cgccggatga aatgcggcag ttgtttcgcg
     6241 attttccgga ggcgatcacg aatacactac atattggcga gcgttgccat gtcgaccttg
     6301 actttgggag ctcgaaatat ccggagtatc cggtgccggc tggccaaacg cgggaaggct
     6361 atttgcgcgg gctttgctac caaggtttgc gcgcgcgcta cggcgaacga gctacggccg
     6421 atgcggaact aacgaggcgg ctcgagtatg aacttggcgt tctggaaaaa acagggttcg
     6481 ttagttatct cctcattgtt tgggatttca ttcatttcgc gaaggaaaaa gggatcccgg
     6541 ttggccccgg acgcggctcg gcggcaggct cgatcgttgc gtttgtcctt ggcatcacag
     6601 acatcgaccc gcttcagttc gggctgattt tcgaacggtt tttgaatcct gatcgcgttt
     6661 cgcctccgga tatcgacgtg gatttctgcg aagcgcgccg tggcgaggtc ctcgaatacg
     6721 ttcgacaaaa atacggcgcg cgccgcgtcg cacagatcat tacattcggc aagctcaagg
     6781 caaaaagcgt tgtgcgtgac gtcgcccgcg tgctgggatg gagctatcgg gatgcagatc
     6841 gcatcgcgaa gatgattccc aacgagctga acattacgct cgatacagca gcggcaaaga
     6901 acgcggagct gaaacgcgcg atcgccagcg agccgccgac acggcagctg tttgagcacg
     6961 caaaa
//
LOCUS       DATDAJ010000252         5622 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1429883, whole genome shotgun sequence.
ACCESSION   DATDAJ010000252 DATDAJ010000000
VERSION     DATDAJ010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5622
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1429883"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /gene="carB"
                     /locus_tag="VIS53_06345"
     CDS             complement(<1..608)
                     /gene="carB"
                     /locus_tag="VIS53_06345"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977399.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HEY5767436.1"
                     /translation="MPRNKELKKILLIGSGPIVIGQGCEFDYSGVQACKALREEGYKV
                     VLVNSNPATIMTDPEFADRTYVEPITPEVIEAIMEREKPDAILPTLGGQTALNAAMEL
                     NRNGALVRHAVKLIGANAQAIAKGEDRQLFKEAMLRIGLDVPRSGIARSVADLDRIIA
                     EIGTFPLIIRPAFTLGGTGGGIAYNREELDEFAARGLDLSPVR"
     gene            complement(683..1204)
                     /locus_tag="VIS53_06350"
     CDS             complement(683..1204)
                     /locus_tag="VIS53_06350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767437.1"
                     /translation="MTISVIPLIGVITLVSCANPPPQPGNFGCSGTDSPNHQLRACIV
                     EVGKFPPPLNESRVDIRDTSGKLIASRNFGSPKGDQGRSVVHSAWTPDSNFFVFSTQS
                     SGGHSPWHWNTYFYSRKKNKFALLDDTIGPVIKSNFKVQAPDIVEATVQGTASDPSDI
                     QNGHVVTRHLGSL"
     gene            complement(1411..1866)
                     /locus_tag="VIS53_06355"
     CDS             complement(1411..1866)
                     /locus_tag="VIS53_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEY5767438.1"
                     /translation="MYPGKLDKIINLFESLPEDERRETLVSYADNAKRQEPREGENFD
                     LVDVRKDEECTDTVGVYLHVDDEDKAHIRMTLGPEVQTLTRAMTAILCKGLDGSTPQE
                     ILDLPSDFVTRVVGTELVRLRSQTVYYVLTRIKSICKVWLDRQRMAQVA"
     gene            2126..3109
                     /locus_tag="VIS53_06360"
     CDS             2126..3109
                     /locus_tag="VIS53_06360"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016615 - malate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEY5767439.1"
                     /translation="MKTPIKVAVTGAAGHIGYALLFRIASGQMFGPDQPLRLHLVEIP
                     AVLGALEGVVMELDDCAFPLLESVIPTADLDEGFRDVNWALLVGSVPRKAGMERKDLL
                     GINGKIFIGQGQAIQKNAAADVRVLVVGNPCNTNCLIAMNNAKDIPSERWFAMTRLDE
                     NRARAQLAQKAGVSICSVTNMTIWGNHSSTQYPDFYNARIDGRSANEVIADEKWLKED
                     FIATVQQRGAAVIKARGLSSAGSAANAVVNTVVSLTTDTPANDWHSVALCSDGSYDVE
                     QGLISSFPVRVRGEKWEIVQGLPINDFSRAKIDASVAELKEEKSLVSELIS"
     gene            complement(3254..4003)
                     /locus_tag="VIS53_06365"
     CDS             complement(3254..4003)
                     /locus_tag="VIS53_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767440.1"
                     /translation="MIDEKIFATPRKVKDVGDCYFYHTMELPGRGVIEGQDWDLRGRV
                     DEYLGNIDFAGQRVLEIGPASGFLTFEMEKRGADVISVEVTDEHGWDFVPYPNARLEE
                     VFGPRRIVMQQLKNSYWFSHSALQSKARVYYGDAYNLPAALGQFDIAVMGAVLLHCRD
                     ALRIVEQCGKRAKTLIIVDKLHPDLEGAPVCRLAPTPENFLWHTWWHFSTQLFTQFLA
                     VMGFTTSKPTTHQQFHRGRAHTLFTIVARRE"
     gene            complement(4000..4725)
                     /locus_tag="VIS53_06370"
     CDS             complement(4000..4725)
                     /locus_tag="VIS53_06370"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767441.1"
                     /translation="MASPDREDLALGLKPGDPQYRAYVGPPENYDLVAAMAFNLLTTL
                     GLRQHHSLLDVGCGSLRIGRLLIPYLNRGKYFGVEPNEWLVDEGIKRELGETLVQIKH
                     PTFFFSDSPGTISQAKMAFDFALAQSVFSHCGLDLINGWLSAISRSLAQDGALVATFL
                     IGEEDSAQAGWIYPDCVNYRPGTLERAAKDVNLRFEILDWKHPRQTWALFAAPEFDST
                     WFKDRALTWNAGLERALSQKHKP"
     gene            complement(4734..>5622)
                     /locus_tag="VIS53_06375"
     CDS             complement(4734..>5622)
                     /locus_tag="VIS53_06375"
                     /inference="COORDINATES: protein motif:HMM:NF027666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5767442.1"
                     /translation="PPIPFNRMYNPDRMPEAILGNIEEDHLDEEVPFMRHAIWADAIN
                     PALTKTVKARYYGEVTYLDYCLGRILDAVETRPNSENVLICFFSDHGDLLGDHHGWQK
                     QNFFESACRVPLLLSWPGALPAGIERTEFISLADLFGIATGVAGECEMREGIDILKML
                     RSECTPRQYLIGMVEVPGSHDFKIMVLTDEWKYIFMANGGREQLFNRKKDPNELSNCV
                     SSSSAIRSDLYALAVKACKVPGATDAIDGDKLRAFPFRQRPPTRIYQFDRTRGVVGFP
                     DKPQDALKTFDRDTLRSLE"
BASE COUNT         1234 a         1574 c         1549 g         1265 t
ORIGIN      
        1 cgcactggcg aaagatcaag cccgcgcgct gcgaactcat cgagttcctc gcgattgtaa
       61 gcgatcccgc caccagtgcc gcccaaagtg aacgccggac gaatgatcag cggaaatgtt
      121 ccgatctcgg cgatgatgcg atcgagatcc gcaactgaac gcgctatgcc agagcgcggc
      181 acgtccaggc cgatacgcag catcgcttcc ttgaacaatt ggcggtcttc gccttttgcg
      241 atcgcctgcg cgttcgcgcc gatcaattta acggcgtgcc gcaccagcgc gccattgcgg
      301 ttcaattcca ttgcggcatt gagcgcagtc tgtcccccaa gggtgggcaa gattgcgtcc
      361 ggtttttcgc gttccatgat cgcctcgatc acttccggag tgatcggctc gacataagtg
      421 cgatcggcaa attcagggtc ggtcatgatg gttgccgggt tggaattcac cagcaccact
      481 ttgtagcctt cttcgcgcag cgctttgcac gcctgcacac cggaataatc aaattcgcag
      541 ccctgcccga tcacgattgg accggagccg atgagaagga ttttcttgag ctctttattc
      601 cgcggcatct gcgcgccgaa ggtaactcag gcatcgtgcc tgacaagtcg agcaggcttc
      661 cggcctgcga ccattttccg gcttaaagcg agccgagatg cctggtgacg acgtgaccgt
      721 tttggatgtc gctcggatcg gacgccgtgc cttgcacggt tgcctctacg atatcgggcg
      781 cttggacttt gaagttcgat ttaatcactg gcccgatcgt gtcgtcgagc agagcgaatt
      841 tgttcttttt ccggctgtaa aaatacgtgt tccaatgcca cggcgaatgc ccgccggagc
      901 tttgtgtgct gaacacgaag aaattggagt cgggcgtcca cgcagaatgg acaacgctgc
      961 ggccctggtc gcctttgggc gatccaaaat tgcgcgaggc aatcagtttg cccgaggtgt
     1021 cgcgaatatc gacgcgcgat tcgttgagcg gcggcgggaa tttccctacc tcaacgatgc
     1081 atgcgcgcaa ctgatgatta ggggaatccg tccctgagca accgaagttc cccggttgcg
     1141 gcggagggtt ggcgcaggaa acgagcgtga tcacaccgat gagtggaatt acggaaatcg
     1201 tcattttcat ttgctcgtga tttttgcgca ggattaactg ggattgacaa acaaaatcac
     1261 gcgaaggtca cgcacgaaga tgcgcaccgg aagtcaacca tcctggttaa ttcggccgcc
     1321 gggcttctag cccgacgttt cgtccacgcg attatctaca agctggaagc ttttctgccg
     1381 agttcggctg gaagccgaac ttccactccg ctacgccacc tgcgccatgc gctggcggtc
     1441 cagccaaact ttgcagatgc tttttatccg cgtgaggacg taatacacag tctggctgcg
     1501 aagtcgcacc agttccgtgc ccacgacgcg cgtcacaaaa tcactcggca aatcgagaat
     1561 ctcctgcggc gtcgaaccgt ccagcccctt gcaaagaatg gccgtcatcg cgcgagtgag
     1621 ggtttgcact tcggggccga gggtcatgcg aatgtgcgcc ttgtcctcgt catccacgtg
     1681 cagataaacg ccgactgtgt cggtgcactc ctcgtctttg cgtacatcga cgagatcaaa
     1741 attctcgccc tcacgcggct cctgcctttt cgcattgtca gcatacgaaa cgagcgtctc
     1801 gcgccgctca tcttccggca gcgattcaaa aaggttgatg atcttgtcta atttacccgg
     1861 atacatcgca tccagaactt atccctaatg tagttactgt cattttgagc ggggaacctc
     1921 gcgtggtgag gaagaggtgg ccggcaccat gctggccaca gcgggcaaaa tgcccgcgct
     1981 ccccaaactc cgcgactcgt agcgttttga gaatgatgcg ttcacagaag gggagcgcga
     2041 gtatcttgct cgctcaagcc ggcatgttgc cggcttatta ctgtgttcgg ctttgctcag
     2101 cgaaacgttt atggctaatt gcaccatgaa aactccgatt aaagtcgccg tgactggcgc
     2161 cgccgggcac atcggttacg ccctcctgtt tcgcatcgcc tccggacaga tgttcgggcc
     2221 cgatcaaccg ctccgacttc atttggtcga gatccctgcc gtgcttggcg cgctcgaagg
     2281 cgtcgtcatg gaattggacg actgcgcgtt cccgctcctt gaatcggtga taccgacggc
     2341 cgatctcgat gaaggttttc gcgacgtgaa ctgggccctc ctagtcggaa gcgtgccacg
     2401 caaggcaggc atggaacgca aggatctgct cgggatcaac ggcaagattt ttattgggca
     2461 aggccaggct attcaaaaaa atgctgcggc cgacgtgcgt gtgcttgtgg ttggaaaccc
     2521 gtgcaacacg aattgcctga tcgccatgaa caatgcgaaa gacattccga gcgagcgctg
     2581 gttcgccatg acgcgactgg acgaaaaccg cgctcgtgcg cagctcgcgc aaaaggccgg
     2641 cgtaagcatt tgctcggtga cgaacatgac catctgggga aatcattctt cgacgcagta
     2701 tccggatttc tacaacgcca ggattgacgg tcgttccgcg aacgaagtga tcgcggacga
     2761 gaaatggttg aaggaagatt tcatcgccac cgtgcaacag cgcggcgctg ccgtcatcaa
     2821 ggcgcgtggc ctttcttccg ccggctccgc ggcgaatgcg gttgtgaata cggtcgtttc
     2881 gctcaccacc gacacgccag cgaacgattg gcatagtgtg gcgctttgtt cggatggaag
     2941 ttacgacgtg gagcagggat tgatctcgtc attcccggtc cgtgtgcgcg gtgaaaaatg
     3001 ggaaatcgtg caaggccttc caataaacga tttcagtcgc gcgaaaatcg atgcgtcagt
     3061 cgcagaattg aaagaggaga aatcgcttgt tagtgaattg atttcttaga cccacccata
     3121 aagagcgctg tcatgttgag cgaagcgaaa cagctctgga tgttgcatcg gtggattgct
     3181 ctgcagctaa tcagagattc ttcgctacgc tcagaatgac atccgacgta gcccaccggc
     3241 gcgaagccgt ttttcattcc cgccgcgcga cgatcgtaaa aagggtgtgc gctcttccgc
     3301 ggtgaaactg ctggtgcgtc gtcggcttcg acgtcgtgaa acccatcacc gccagaaact
     3361 gtgtgaagag ttgtgtgctg aaatgccacc atgtgtgcca gaggaaattc tccggcgtcg
     3421 gcgctaaccg acagaccggc gcgccctcca aatccggatg caacttatcc acgatgatga
     3481 gcgtcttcgc cctttttccg cattgctcga cgatgcggag cgcgtcgcgg cagtgaagta
     3541 gtactgcccc cattacggcg atgtcgaatt gtccgagtgc cgcaggcaaa ttgtaagcat
     3601 cgccatagta caccctggct ttggattgca gggcggagtg actgaaccaa taagaattct
     3661 tcaactgttg catcacgatt cgacgcgggc cgaacacttc ttctaatctt gcattcggat
     3721 acgggacaaa gtcccagccg tgctcgtcgg tgacttcaac ggagatcacg tcggcgccgc
     3781 gcttttccat ctcgaacgtc aaaaagccgc tggcgggacc gatttccaaa acgcgttgac
     3841 cggcaaaatc gatgttgccg aggtactcat ccactcgacc acgcaaatcc cagtcctgac
     3901 cttcaatgac tccgcgaccc gggagttcca tcgtgtggta aaaataacaa tcaccgacat
     3961 ctttcacctt gcgcggggtc gcgaaaatct tctcgtcgat cacggcttat gcttttggct
     4021 gagcgctctt tccaatcctg cgttccaagt gagagcgcgg tccttgaacc aggtggaatc
     4081 aaattccggc gcggcaaaaa gagcccacgt ttggcgggga tgtttccagt ccagaatttc
     4141 gaatcgcaga tttacatctt tggctgcgcg ttcgagtgtc cctggccggt aatttacgca
     4201 gtcgggatag atccaacctg cttgcgcgga gtcttcctcg ccgatcaaga acgtggcaac
     4261 cagcgctccg tcctgagcca gtgaacgcga aatcgccgac aaccaaccgt tgatcaggtc
     4321 gagcccgcaa tggctgaaga ccgattgggc cagcgcgaaa tcgaaagcca ttttcgcctg
     4381 cgaaatcgtg cccggtgaat cggagaagaa aaatgtcggg tgtttgatct gcaccaatgt
     4441 ttcgcccagc tcgcgcttga ttccttcatc gaccagccat tcgttaggct cgacgccaaa
     4501 gtatttcccc cggttcaggt acggaattaa aaggcgcccg atccgcagcg aaccacaacc
     4561 gacatcaagc agcgaatgat gctgacgcag accgagcgtg gtcaggagat tgaacgccat
     4621 cgccgcgact agatcgtaat tttcgggcgg accgacataa gcacgatact gcgggtcgcc
     4681 cggtttaagg ccgagggcaa gatcttctcg atcgggtgaa gccattgtca ttttcactcc
     4741 aacgatcgta acgtgtcgcg gtcgaaggtc ttcagcgcgt cctgaggttt gtcgggaaat
     4801 ccgaccacgc cgcgagtccg atcgaattga tagatgcggg tcggcggccg ttgacgaaac
     4861 ggaaacgccc taagcttatc tccgtcgatc gcgtcggttg cgcccgggac tttgcacgct
     4921 ttcaccgcca gagcatacaa gtcgctcctg attgcggacg acgaactgac gcagttcgac
     4981 aactcgttag gatctttttt acgattgaag agctgttccc gtccgccgtt cgccatgaaa
     5041 atgtatttcc actcgtctgt cagaaccatg attttgaaat catgtgagcc gggaacttca
     5101 accatcccga tgagatattg gcgcggtgtg cattcgcttc gcagcatttt gagaatgtcg
     5161 attccctcgc gcatctcgca ttcgccggca actccagtcg caatgccgaa aagatctgcc
     5221 aggcttataa attcagttcg ctcgattccc gcaggcagtg ctcctggcca actgagcagc
     5281 aaaggaacgc ggcaggccga ctcaaaaaaa ttttgtttct gccagccgtg atggtcgccg
     5341 agcagatcgc catggtcgga aaaaaaacag atgagaacgt tctcggagtt tggtcgcgtt
     5401 tcgactgcat cgagaattcg cccgaggcaa taatccaaat aagtaacctc gccgtagtaa
     5461 cgcgccttca cggtctttgt tagtgccggg ttaattgcgt ctgcccaaat ggcgtgacgc
     5521 atgaaaggaa cttcttcgtc caggtgatct tcctcgatgt tgccaaggat tgcctccggc
     5581 attcgatcag gattgtacat ccgattgaac ggaatcggcg ga
//
LOCUS       DATDAJ010000253         5423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1437004, whole genome shotgun sequence.
ACCESSION   DATDAJ010000253 DATDAJ010000000
VERSION     DATDAJ010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1437004"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(162..776)
                     /locus_tag="VIS53_06380"
     CDS             complement(162..776)
                     /locus_tag="VIS53_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767443.1"
                     /translation="MRRMLMLLVIVAASAATLAALWIFRGREISSFIDRYWTVETQSA
                     PLQSIAYEGSGNGGILICNGVSFSLNDLRSGLSLSIGSTKDNQLALATSGKVFPFGPL
                     TSTSENTGERLATVPPSGDQAFLANRHSVLSWPTPFDMNFMTGQSPSWKRHTYQEIRW
                     EKSSGAKLQMLWRYEQFFYPGNGWTSGFMTREGSTGLIRVHIKE"
     gene            complement(833..1918)
                     /locus_tag="VIS53_06385"
     CDS             complement(833..1918)
                     /locus_tag="VIS53_06385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767444.1"
                     /translation="MRKRICFIHVGPHKSGTTSIQWFLQENRAELLKHGFFVPESETK
                     RGAHHALAEGLAGLDVGEPRQPLVTKSIRAIAETASDAIIISSEALEGILESRKHAEI
                     FFGQIRELNFEPKLVLFPRNQPQWINSSYAFSVRSFRRCDPFQSAALGFAQSPGSRFF
                     RWVGLANAHALELIARPFTKETIACGVITEFVRSIGINSPQFRDFEIRRNEAVGPFTV
                     SIAREVLRPIAHAGKPLKWLQAERCKKELAAHLKETGLADARYCGLSTSLARRIGREL
                     QSDNNAFAQSVWGSPWDAIFAADVAEEFTPNDFEIRAPDWFTARRLRRAIRVMKARVD
                     EILQDPALAVDAPWNDLAYRSGLISRK"
     gene            2067..2717
                     /locus_tag="VIS53_06390"
     CDS             2067..2717
                     /locus_tag="VIS53_06390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767445.1"
                     /translation="MPEYVDKPEPRGQTIAAVLAVGGIYLALPRNVVVGPIWLLPTVI
                     VVLLVPTVVSHRVGKQSLNRLLGFVINGITTLALIGSVILLVRLLPTHRGSPLQLLRS
                     GGLLWLTNVIVFALWYWRLDGGGPTLRHKQRKFGSKSFLFPQMQIPHDERSEFACARW
                     HPRFVDYLFVAFTQSSTFGPTDAPLLARWAKILAMIQIFISLSIVVLLISAAVGAL"
     gene            complement(2795..2941)
                     /locus_tag="VIS53_06395"
     CDS             complement(2795..2941)
                     /locus_tag="VIS53_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767446.1"
                     /translation="MITKNIGMLLLAIYLILVGITALFHVGIGAIVMGVVALIAGILI
                     LIGK"
     gene            complement(3049..4374)
                     /locus_tag="VIS53_06400"
     CDS             complement(3049..4374)
                     /locus_tag="VIS53_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767447.1"
                     /translation="MQVQEQADRLTTIRAAFPKEGLFAEKEWLLSPDAFPIDRKSLAD
                     LEQLGHRLFVFQRACNQLYQLSIKGKQPEWVARYLDAGKPKELIEFSRRKEIRDDLPR
                     VIRPDLILTEKGYIIAEIDSVPGGIGLTGWLNQTYSSFNNNIIGEANGMLEGFRAVVP
                     NGADIVISQESATYRPEMEWLAARLNQTSALKPQASAWRVLPAENYEPQDGRAVYRFF
                     ELFDLPNISKIENALRANAEGQISITPPIKPYLEEKMWFALFWLQPLREFWRRELGDK
                     YFIKLQEIIPYSWLLDPTPLPQHAVIPRLEIHDWREAAKLSQKDRDLLLKVSGFSPLG
                     WGSRGNALGSDLAHADWEKRIEHALATFESSPTILQRFHKGRLFEHSYWDSDSGELKV
                     MKGRVRLCPYYFVEIDRVKLRGALATIAPADKKFLHGMSDAILVPSKAQ"
     gene            complement(4478..5095)
                     /gene="ruvA"
                     /locus_tag="VIS53_06405"
     CDS             complement(4478..5095)
                     /gene="ruvA"
                     /locus_tag="VIS53_06405"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEY5767448.1"
                     /translation="MITFLDGKLVNALPTQAIVDVGGVGYEVFIPLSSYDKLPAVGQP
                     IRILTHLAVREDAHVLYGFMTPAERDLFRLLVNNVSGIGPKLALAVLSGMSVTSFKAA
                     VVNSDVASISKISGLGKKTAERVVLELKDKVGVAAAWEAASAAHAPTPEQEQANEAVL
                     ALIALGYKQVDAHKAVHDLQQRGEGEGKSAEELVKLALKRIAAGR"
     gene            complement(5145..>5423)
                     /locus_tag="VIS53_06410"
     CDS             complement(5145..>5423)
                     /locus_tag="VIS53_06410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767449.1"
                     /translation="LRPNMQFAAVEFQEPSLVWYFRSRVQGFLTPLNKRRAAEFMSAP
                     DPRFLVLPTPVAGELFANPPASWRFFTISGFNIVKGKRVDLTLVSKSE"
BASE COUNT         1199 a         1497 c         1456 g         1271 t
ORIGIN      
        1 aatccgtcga gagcttacag ggtgcgtcca gcggcaagcg tgctcccaca gactttccgc
       61 cgcgtcgcgg gtaaaaagct tttgaaattt ttgcgcgagt cgcacggcaa acgatgcaga
      121 aaagaggcgc tctgctcaag gaacgacctt ttcggccgtc gtcactcctt tatgtgtact
      181 cgaatcagac cagttgagcc ttcccgggtc atgaatccgc ttgtccagcc attgccggga
      241 taaaaaaatt gctcgtaacg ccaaagcatt tgcagcttcg caccagacga tttctcccat
      301 cgaatttcct gatacgtgtg tcgtttccaa gatggcgact gaccggtcat gaagttcata
      361 tcaaacggtg tcggccagct gagaacgctg tgacggtttg caaggaaggc ctggtcacct
      421 gaaggcggca cagtagcgag acgttcgccg gtattctctg aggtagatgt gagcgggcca
      481 aaagggaaaa ccttgccgct ggtcgccaat gcaagttgat tgtctttcgt tgaaccaatg
      541 cttagcgaca agcctgacct gaggtcattc aaactgaaac tgacgccatt gcagatgagg
      601 atgcctccgt tgccgctgcc ttcgtacgcg atggattgaa ggggtgcgga ttgagtttcc
      661 actgtccagt aacgatcgat aaacgacgag atttcgcggc cacgaaaaat ccacagcgcc
      721 gccaacgtgg cggcactcgc cgcaacgatt acaagcagca tgagcatccg tcgcatacgc
      781 ctcattttat acgtgtgcgc tctcaacctc cacgtcgcgc agtgctctcg atctattttc
      841 ttgaaattaa gccgctacga tacgccaggt cattccaggg cgcgtccacg gccagcgcgg
      901 gatcctgcaa tatctcgtcg acgcgagctt tcattacgcg gatcgcgcgc cgaagccgtc
      961 gcgccgtgaa ccaatctggc gcacgtatct cgaagtcgtt aggcgtgaac tcctcggcca
     1021 catcagcagc aaaaatcgcg tcccatgggc taccccaaac ggattgtgca aaggcgttat
     1081 tgtcggactg caattctcgt ccgatgcgtc gcgccagcga agtgcttagg ccgcaatatc
     1141 tcgcgtccgc caaccctgtt tctttcaaat gtgcagcgag ttctttcttg catcgctcag
     1201 cctgaagcca cttgagcggc tttccggcgt gcgcgatcgg gcgcaatacc tcgcgggcga
     1261 tgcttaccgt gaacggcccg accgcttcat tgcgacgtat ctcgaaatct cgaaattgcg
     1321 gcgaattgat gccgatgctt ctgacaaatt ccgttatcac gccgcaggcg atggtttctt
     1381 tggtaaacgg acgagcgatg agttccaaag catgggcatt cgccagtcca acccagcgaa
     1441 agaacctcga accaggagat tgagcaaagc ccaacgcggc ggattggaat ggatcacatc
     1501 ggcggaagct cctgaccgaa aaggcgtagc tcgagttgat ccattggggc tggttgcgcg
     1561 gaaacaacac gagcttcggt tcgaaattta gctcgcggat ttggccaaag aaaatctccg
     1621 cgtgttttcg gctttcgagg attccctcca aagcctccga tgaaataatg attgcgtcgg
     1681 acgctgtttc agcgatcgca cgaatcgatt tggtcaccag cggctgccgg ggctctccca
     1741 catcgagacc ggcaagtccc tcagccaggg catggtgtgc gccgcgtttt gtctcgctct
     1801 cgggcacgaa aaaaccatgc ttcagcaact ccgctcggtt ctcctgcaaa aaccactgga
     1861 tcgaagtcgt acccgactta tgtggtccga cgtggatgaa gcagatgcgc tttctcatgc
     1921 tcttggctca gagtgttatc cctaacgaag gcgagagaga tcacatttgc tgaccaaccc
     1981 aggcaaagca agcgtgacgt ggttcactcg atgatggccg caagtgttga tcagattgcg
     2041 aatctcgttt atgcggaaac acacaaatgc cagaatacgt tgacaaaccc gagccacgcg
     2101 gacagacgat agccgcagtt ctcgccgtcg gcggtattta cctggccctg ccacgcaacg
     2161 tcgttgtcgg cccgatttgg ttgttgccga ctgtgattgt cgtcttgctc gtgccgactg
     2221 tggtgagcca tcgtgtagga aaacaatcac tcaatcgcct cctcgggttc gttattaacg
     2281 gaatcacaac actggcgctg attggctcag taattttact tgtgcgcctt ttgccgacgc
     2341 accgcggatc tccattgcag ttgctccggt ccggcgggtt actttggctg acgaatgtga
     2401 tcgtgttcgc gttgtggtac tggcgcctgg acggcggcgg cccaaccctg cgtcataaac
     2461 aacgaaaatt cggcagcaag agtttccttt ttccgcagat gcaaattcca cacgacgagc
     2521 gatccgaatt tgcgtgtgca cgctggcatc cacgcttcgt cgattatctg ttcgtcgcgt
     2581 ttacgcagag ctccacgttc gggccgacgg acgcgccact gctggcacgc tgggcaaaga
     2641 ttctggcaat gattcagatc ttcatttcgc ttagcatcgt tgtcttgttg atctcggcgg
     2701 ccgtaggagc actgtgaacg ggggatcggt tgcacagctg tagctaggac gctatgcgcc
     2761 ctcgtctttc gcttcgcgag ctggagccgt ttaactattt gccgatcaaa atcaaaatgc
     2821 ccgcaatgag cgccacaact cccatcacaa ttgctccgat cccgacatga aagagtgcag
     2881 tgattccgac gaggatcaga tagatcgcga gcagtagcat tccaatgttt tttgtgatca
     2941 tgcgtcggtt ttgaggcaag ccgattgcct ttgcacgcaa aaaccagccg gctggcacac
     3001 ggcgtgccgt tgatttacac actcggcagc tcgtcggatc tgcttttctt attgcgcctt
     3061 cgagggaacc aggatcgcgt cgctcatgcc gtgtaaaaac ttcttatcgg ctggagcgat
     3121 ggtagccagc gcaccgcgta atttcacacg gtcaatttcc acgaaataat acgggcacag
     3181 acgcacgcgg cctttcatta ccttcaattc gcctgaatct gaatcccagt agctgtgctc
     3241 aaacaaccgc cctttgtgaa aacgctgcag gatggttggt gacgattcaa aggttgccaa
     3301 agcgtgttcg attcgctttt cccaatcggc gtgcgctagg tcgctcccga gggcgttgcc
     3361 gcggctgccc cagccgagcg gggaaaaacc gctcactttc aaaagaagat cgcgatcttt
     3421 ctggctaagc ttcgcagcct cgcgccagtc gtgaatttcc aaacgtggaa tgactgcgtg
     3481 ttggggcagg ggagttggat cgagcagcca ggagtaagga attatttctt gtaacttgat
     3541 gaagtatttg tctcccagtt cgcgtcgcca aaattcgcgc aatggctgaa gccagaagag
     3601 ggcgaaccac attttctctt cgagataagg cttgatcggc ggcgtaatag aaatttgccc
     3661 ttctgcgttc gctcgcagcg cgttttcgat tttggaaata tttggcagat cgaacaattc
     3721 gaagaaacgg tacaccgcgc gtccgtcctg tggttcgtaa ttttcagctg gcaatacgcg
     3781 ccaggcagag gcttgaggtt tgagcgctga ggtttgattc aatcgcgcag cgagccactc
     3841 catctccggg cggtaggttg ccgattcctg cgaaatgacg atgtcggcgc cgtttgggac
     3901 aaccgcgcga aatccctcca acatgccatt cgcttcgccg ataatattgt tattgaatga
     3961 agaatacgtc tggtttagcc aaccggtgag gccaatcccg cccgggactg aatcgatttc
     4021 ggcaataatg tagcctttct cagtgaggat aagatctggc cggattactc gcggcaaatc
     4081 gtcgcggatt tccttccgcc gcgaaaattc aatcagctcc ttcggtttac cggcgtcgag
     4141 ataccgcgct acccattcgg gttgcttgcc tttgatgctg agctgataca gctgattgca
     4201 agcgcgctga aaaacgaaca gccgatgccc gagttgctcg agatcggcaa gagatttcct
     4261 gtcgatcgga aatgcgtctg gcgagagcag ccactctttc tcggcgaaga ggccctcctt
     4321 cgggaaagcc gcacgaatgg tggttagccg atcggcctgt tcctgcactt gcatgatgaa
     4381 gagaacgtcc aacgctcaac gccgaacgtc caatgccgaa tggagacgtc tgaactcgat
     4441 attggacatt ggacgttgag cgttcggcgt tttcttccta cctgccggcg gctatccgtt
     4501 tgagcgccag cttcaccagt tcttctgctg atttaccttc gccttcgcct ctctgctgca
     4561 aatcatggac tgccttatgt gcatcgactt gtttgtagcc aagcgcgatc agcgccagca
     4621 ctgcttcgtt tgcctgctct tgctcgggcg tcggtgcatg cgcggcgctg gctgcttccc
     4681 atgctgcagc cactccgacc ttgtccttta attcgaggac aactcgctcg gctgtctttt
     4741 tcccaaggcc gctgattttc gaaatcgatg cgacatcaga attcaccacc gccgctttga
     4801 aactggtcac gctcatcccg cttaaaactg cgagcgccag ctttggccca atgccgctaa
     4861 cgttgttcac gagcaatcgg aaaagatcgc gctcagccgg cgtcatgaag ccatagagca
     4921 catgcgcatc ttcgcgcacg gccagatgcg tgagaatgcg gataggctgc ccgacagcag
     4981 gcagcttgtc gtagctcgac agcggaatga acacttcata gccgacgccg cctacatcca
     5041 caatcgcctg tgtgggcagg gcatttacga gtttaccatc aagaaacgtg atcatgcgag
     5101 tcgtgaatcg ttaaatcgtt aaaacgttga atcgtcaaat gcgatcactc agatttcgac
     5161 acgagcgtga ggtcgacgcg tttgcctttt acgatgttga aaccactgat tgtaaagaat
     5221 cgccagcttg ccggtgggtt cgcgaaaagt tcgcccgcga cgggcgtcgg cagaacgaga
     5281 aaacgcggat cgggtgcgct catgaattca gcagcgcgac gcttgttcag cggcgtgaga
     5341 aaaccctgga cacgggagcg aaaataccag accagacttg gctcttggaa ttcgaccgca
     5401 gcaaattgca tgttcggccg tag
//
LOCUS       DATDAJ010000254         3795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1442221, whole genome shotgun sequence.
ACCESSION   DATDAJ010000254 DATDAJ010000000
VERSION     DATDAJ010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1442221"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="VIS53_06415"
     CDS             <1..873
                     /locus_tag="VIS53_06415"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEY5767450.1"
                     /translation="IFTSSEGKLPRTAQLRRLIRDKDSYSGEFDQHSSTIDEVLEPSP
                     IIEHASQKNGAEIKPLTYSELTRAAKRASEFVRKITPSALDSEVPTDVRTRSRLDTLA
                     TLYGRWWHKFFQRLDWKGGIDSAQKLFEKELPISPDAKAAVKDWNATRRNLFSDATIA
                     RFFESDETLFHAEFPFSWRRNDRSVLEGLIDSIMINRKTGRCLLVDWKTNDVSPSDVE
                     IFRETYRPQLAAYWKAVTAITGLEVEAGLFSTALGRLLLYSAEELQTEWRRLEQLPPA
                     QLENEIRSDAVDAF"
     gene            complement(921..2024)
                     /locus_tag="VIS53_06420"
     CDS             complement(921..2024)
                     /locus_tag="VIS53_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HEY5767451.1"
                     /translation="MRKIRIAIVGVGNCASSLVQGINFYDGSSANGTSIGLMHRQIGG
                     YRPSDIEVVAAFDIDRRKVGLDVSRAIFSPPNCTKVFCEKIKLTGAIVKMGCVLDGYP
                     PHMQDQDPLRTFLPLEKETTREDIIGELKNSSAELMVNYLPVGSEQATRFYAGCALEA
                     GLGFVNNIPVFIASDPAWAKRFADKNLPLIGDDIKAQVGATIVHRALVDLFRKRGVKV
                     VRTYQLNTGGNTDFLNMLNRTRLASKKTSKTEAVQSVMGDRLVDENIHIGPSDYVPWQ
                     LDNKIAFIRVEGRLFGDVPMEIDLKLSVEDSPNSAGVAIDAIRCCKIALDRGIGGVLH
                     SPSAYFSKHPPVQMTDDEAFRCVEQFIRGDRES"
     gene            2236..3636
                     /locus_tag="VIS53_06425"
     CDS             2236..3636
                     /locus_tag="VIS53_06425"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5767452.1"
                     /translation="MCSNLAAISVMIAAALGVSSSSLEAIPVYGVEQAVALAQERNPE
                     ILIAHKKVTAARGGFIEARSGYLPWLSSSGLYDKRQTESQTNLRQEDYNAIVKLEQNL
                     YTGGAVSSQVAIAQLNIAKANYDLQETIGRVTMDVRIAFNELLLNRAKVRVHADSVRV
                     FEQELKGEQENFNAGIVGKLNVQRAEVALANERPELFNAQTDLKNSYLRLAELLGTDI
                     APGAEAPPFEVSGQLQYRPNHPDLNDCLARADANRGIIKSKAKDIEIENRQYVLDRSA
                     TRPHVRAFSGYEVYSERDPDVGPEFNYGGVIGINATWNLFDGFATKGRMQATRARRDG
                     AVQALAAARRSVASEVRSAFFDLQQADRVLESETKNLQTADEALDMARGNFAAGLGTQ
                     LDVLQAAADVTRTRTTRLSAIYLHNVALARLTRACASSAEALNFRSDFKDVKNETRNA
                     THAADVAKPPEKMTQR"
BASE COUNT          919 a         1051 c         1048 g          777 t
ORIGIN      
        1 atcttcacta gcagcgaggg aaaactgccc agaacagcac aacttcgacg gctgattcgc
       61 gacaaggatt cttattccgg cgaattcgac caacacagca gcacgatcga tgaggtcctc
      121 gaaccttcgc cgatcataga acacgcgtca cagaaaaacg gtgctgaaat caagccatta
      181 acctacagcg agctcacgcg cgccgcgaaa cgcgcttcgg aattcgtccg gaagatcaca
      241 ccaagcgctc tcgattcgga agttccgaca gacgtgcgaa cgcgctcgcg actcgatact
      301 ctggctaccc tctacggtcg ctggtggcac aagttttttc aacgcttgga ttggaaaggt
      361 ggaatcgatt ccgcacaaaa gttattcgaa aaggaattgc cgatttctcc cgacgcgaaa
      421 gccgctgtaa aagactggaa cgccacacgc cggaatttgt tcagcgacgc caccatcgct
      481 cgtttttttg agagcgatga aacgttgttt cacgcggaat ttccattttc gtggcgcaga
      541 aacgatcgca gcgtactcga aggcttgatc gattcgatca tgattaaccg caaaactggc
      601 aggtgtcttc tggttgattg gaaaacaaac gatgtttccc caagcgacgt cgaaatcttt
      661 cgcgaaactt accggccaca attagccgct tattggaagg ccgtcacggc gattaccggc
      721 ctcgaagtag aagccggctt gttctcgact gcgcttggcc gtttgctgct ctattccgcc
      781 gaggaactgc agacggaatg gcggcggctg gaacagcttc cgcccgcgca actcgaaaat
      841 gaaattcggt cggatgcggt cgatgccttt tgagagcaaa aaaataaaag cggtctgggc
      901 accgcgttac gctcgcacta ctagctttcc cggtcgccgc ggatgaattg ctcgacgcag
      961 cgaaacgctt cgtcgtcggt catttgcacg gggggatgct tggaaaaata ggcggaaggc
     1021 gaatgcaaca cgccgccgat gccgcggtcg agcgcaatct tgcagcagcg gatcgcgtcg
     1081 atcgctactc cggctgagtt gggggaatct tcgactgata gtttcaagtc aatttccatc
     1141 ggcacatccc caaagaggcg gccttccacg cgaatgaacg caatcttgtt gtcgagttgc
     1201 catggcacat aatcgctcgg gccgatatgg atgttttcgt ccaccaggcg atcgcccatc
     1261 acggactgga ctgcctccgt cttggaagtt ttcttcgatg ccagtctggt gcgattcagc
     1321 atattcagga aatcggtgtt gccgcccgtg tttaactgat aagtgcgcac aactttcacg
     1381 ccgcgcttgc gaaagagatc gaccaatgcc cgatgcacga tggtggcgcc cacttgcgcc
     1441 ttaatgtcgt ccccaataag cggcagattt ttatcggcga atcgtttcgc ccaagccgga
     1501 tcgctcgcga taaaaaccgg gatgttattg acaaaaccga ggccggcttc cagcgcgcaa
     1561 ccggcataaa atcgggtagc ctgctcggac ccgacgggaa gataattgac catcagctcc
     1621 gcagaggaat ttttcagctc gccgataatg tcttcgcgtg tggtttcctt ctcgagcgga
     1681 aggaatgtgc gtagtgggtc ctgatcctgc atgtgcggcg ggtagccatc cagaacgcag
     1741 cccattttta cgatcgcgcc agtgagctta atcttttcac agaacacctt tgtgcaattg
     1801 ggcggcgaaa aaatagccct gctcacgtcc aggccgacct tgcgccggtc aatatcgaaa
     1861 gcagccacga cctcaatgtc actcggacga tacccgccga tctgacggtg cattaagcca
     1921 atgctagtac cgttggcgga ggagccatca taaaagttga ttccctgcac gagcgagctg
     1981 gcgcagtttc caacgcccac gattgcgatt ctgatttttc tcatttaaaa actaaaacct
     2041 acctgatcta aataattcgg agcaagcgat aaattaggct ggatcgatgc cgcgtccccc
     2101 ctagttaggc cacccgaaac cgggccgcga agcctgaatg tgtctgaagt cgccccggct
     2161 tgcaaggcct gatataaggg caagagtcag aggcgtcctg acgcaggggc agcctccgcc
     2221 aggagataaa aacacatgtg ttcgaactta gcggccatca gtgtgatgat cgctgctgca
     2281 ttgggcgtgt cctcaagctc attggaggcg attccggttt atggcgtcga acaagccgtt
     2341 gccctggccc aggaacggaa ccccgagatc ctcatcgcgc acaagaaagt gacagcggct
     2401 cgcggcggtt tcatcgaagc gcgttcggga tatctcccct ggctgagctc aagcgggcta
     2461 tacgataaac gacagaccga gagccagaca aaccttcgac aggaagatta caacgcgata
     2521 gtaaagctag aacagaacct ttacacgggc ggagcggtca gcagtcaggt ggctatcgcg
     2581 cagttgaaca tcgccaaggc aaattacgac cttcaggaga cgatcggccg cgtcacgatg
     2641 gatgtgcgaa tcgcattcaa tgaattgctg ctaaaccggg cgaaagtccg cgtacacgcg
     2701 gattccgtgc gggtgttcga acaggaactc aaaggcgagc aggaaaattt caacgccggc
     2761 attgtgggca aattaaatgt gcagcgggcg gaggtggcac tcgccaacga gcggccggaa
     2821 ttatttaacg cgcaaacgga tttgaaaaac tcgtatttgc gactggcgga acttttgggg
     2881 acggatatcg ctccgggcgc agaagcgcct ccgttcgaag tttcgggaca attgcaatat
     2941 cggcccaatc atccggacct taacgactgc ctcgcacggg ctgacgcgaa ccgtggcatc
     3001 atcaaatcca aagcgaaaga catcgagatc gagaatcgcc agtacgtttt ggaccggagc
     3061 gcgacgcgtc cacacgtgcg cgccttctcg gggtatgaag tttatagcga gcgggacccg
     3121 gacgtcggtc ctgaatttaa ctacggcggc gtgatcggaa taaacgccac gtggaacctt
     3181 ttcgatgggt tcgcgaccaa agggcgcatg caggcgacgc gcgcccgacg cgatggggcg
     3241 gtgcaggcat tggcagcggc acggcgcagc gttgcctcgg aagtgcgcag cgcatttttc
     3301 gatcttcaac aagccgaccg cgtcctcgag agtgaaacaa aaaacctgca aacggccgat
     3361 gaagcgctcg acatggccag agggaatttt gccgccggat tgggaacaca acttgatgtg
     3421 ctgcaagcag ccgccgacgt cacccgtacg cgcacaaccc gattgagcgc gatctatttg
     3481 cacaacgtcg ctctcgcccg acttactcgc gcctgcgcca gttcggccga agcgctcaat
     3541 ttccgatccg acttcaaaga cgtgaaaaac gaaactcgta acgctacgca tgctgccgat
     3601 gtcgctaagc cgccggaaaa aatgactcaa cgatgaggct accattaaaa ttgacggcca
     3661 aatctgtagc cgtcgccctg tgggcgacgc gacgcgaatg tgctgagcga atgggccgtg
     3721 cgcttcccac agggaagcgg ctacaggcgg ctccgagtat gcacattctg gttctcatcc
     3781 tgatcgcgtc cttcg
//
LOCUS       DATDAJ010000255         3167 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1443698, whole genome shotgun sequence.
ACCESSION   DATDAJ010000255 DATDAJ010000000
VERSION     DATDAJ010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1443698"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1215)
                     /locus_tag="VIS53_06430"
     CDS             complement(<1..1215)
                     /locus_tag="VIS53_06430"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY5767453.1"
                     /translation="MVLFTIFCPIVAAVLILLGAPARKTALAASVLTLAAALFLFASL
                     DHRYADFQHVTSFGISLEWRLSFTTGIDGLSVIMVLLASVVTVAAVWFAGAVERNESA
                     FYACLLLISGGAIGAFASIDLFFFYAFHELALIPTFLLIGIWGSGNRVAAAWKITIYL
                     AIGSFILLLGLILLYQSFPLASRSFDIRVLQTAAGMGQISPEAQRHVYLLLLIGFGIL
                     VSLFPFHTWAPEAYAAAPAPAAMLHAGVLKKFGLYGLLRLAIPMLPEGARHWATLLIV
                     LLLGNIIYVGLVTIAQKRLDWMLGYSSVMHMGYIFLGIASFGALGVTGAVVLMFAHGL
                     SIALLFGIAGELRRRTGTLAFDELGGLARVMPFAGLAFGLGMFAAIGLPGFANFAGEI
                     MIFFGGFSNGWEI"
     gene            complement(1215..2705)
                     /gene="nuoL"
                     /locus_tag="VIS53_06435"
     CDS             complement(1215..2705)
                     /gene="nuoL"
                     /locus_tag="VIS53_06435"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY5767454.1"
                     /translation="MRDDEGKSRYFAALSLFMFAMLGIVLANNFVMLFIFWELVGFTS
                     YVLIGHWFFRDAAADAANKAFITTRIGDFGFMTGILMLWMTTGSVVFAEIAPRMPMFG
                     GHATFAAIVALLIFCGAVGKSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYMLV
                     RVAFIIQASQTALLIVAWIGTITAVMAALIATQQDDIKRILAYSTLSQLGYMVMAVGL
                     ASNEAAMFHLFTHAFFKALLFLAAGSVIVMLHHEQNIWKMGGLRRRLPITFATFGAGA
                     LALIGCPPFSGFFSKDAILAVAYEHNLPIFAVALFTAFLTAFYVIRMLVIVFFGNPRS
                     DNAREGRESPRVMTMPLIVLAVLATLGGFAFFARNFLTLPSEKEAAVFVPVLAIIALI
                     LGVGLAIVLYRGRAAEPVKVELLRRKFYFDEFYGWLIYWTQELLARVSAFIDRWVIDA
                     GAVGGSSRGTWGVGALLRLIQVGNLQAYAFLFGLGVVALIYFALMR"
     gene            complement(2718..3011)
                     /locus_tag="VIS53_06440"
     CDS             complement(2718..3011)
                     /locus_tag="VIS53_06440"
                     /inference="COORDINATES: protein motif:HMM:NF012868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767455.1"
                     /translation="MNSFYPWLILLAPFASAMVITLFTLRWKSFSSTISITAVLVSFC
                     CSCFVFAQSATSAPEFVWLDLPPLFRVPLGLTLDQLSRTMAVVVSGVGALIHI"
     gene            complement(3032..3157)
                     /locus_tag="VIS53_06445"
     CDS             complement(3032..3157)
                     /locus_tag="VIS53_06445"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012636.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit K"
                     /protein_id="HEY5767456.1"
                     /translation="MLVFFVITVAAAEVAVGLALLVALYRARQTTDVADITSLKF"
BASE COUNT          862 a          882 c          892 g          531 t
ORIGIN      
        1 aatttcccag ccgttgctga atccgccaaa aaaaatcatg atttccccgg caaaattggc
       61 gaaacccggt agaccgatcg cggcgaacat gccaagtcca aaggccagcc cggcgaaagg
      121 cattaccctc gcaagtccgc cgagctcatc aaaagccagc gtgcccgtcc gccggcgcaa
      181 ttcgcctgcg attccaaaca gcagagcgat cgagagaccg tgagcgaaca tcaacacaac
      241 ggcgccggtt acgccgagcg cgccaaagct ggcgattccg aggaaaatgt agcccatgtg
      301 catcacgctt gaatagccga gcatccaatc gagtcgcttc tgcgcgatgg taaccagtcc
      361 gacgtagatg atgttgccga gtaacagcac gatgagcagg gttgcccagt gacgggcgcc
      421 ttcgggcagc attgggatag ccaggcgtaa tagcccataa agtccgaatt tcttcaacac
      481 acctgcgtgc agcatcgcag cgggcgccgg cgccgcggca tacgcttccg gtgcccaagt
      541 gtgaaacgga aagagcgaga cgagaattcc aaaaccgata agcaacagca gataaacatg
      601 ccgttgcgcc tccggagaga tctggcccat tccggctgca gtctgcaaca cgcgaatatc
      661 aaaactccgc gaggcgagag gaaagctctg gtaaagcaag atcaggccca gtagcagaat
      721 gaaactgccg atggcgaggt agatcgtgat tttccaagcc gctgcgaccc gattcccgct
      781 gccccagatt ccgatcaaca aaaatgtggg gatcaacgcg agttcgtgaa acgcgtaaaa
      841 gaaaaacaaa tcgattgaag cgaacgctcc gatcgcgccg ccagaaatga gcaggagaca
      901 ggcataaaac gcgctttcat ttctctctac cgccccggcg aaccacactg cagccacggt
      961 gacgacgctg gcgagcagca ccatgattac gctcaatccg tcgatgccag tggtgaagct
     1021 cagccgccac tcgagagaga tgccaaacga tgtgacgtgt tggaagtcgg cgtagcggtg
     1081 gtcgagggaa gcaaatagaa atagtgctgc tgccaacgtc aaaaccgacg cagccagcgc
     1141 agtctttcgt gcaggcgcgc caagcagaat cagaacggcc gcaacgatcg gacagaaaat
     1201 agtgaacaga accattagcg cataagtgca aagtaaatga gagcgacaac accgagaccg
     1261 aagaggaacg cgtacgcttg aagattgccg acttggatta gtcgcaggag cgcgccgacg
     1321 ccccaggtcc ctcgactgct tccgcccacc gcgcctgcat cgatgaccca gcgatcaatg
     1381 aaggctgaca cacgagcgag cagctcctga gtccaataaa tcagccatcc gtagaactcg
     1441 tcgaaataga acttgcgacg caacaactcg accttgaccg gttccgccgc gcgtccgcgg
     1501 taaagaacaa tggcgagccc aactccaagg atcagtgcaa tgattgccag caccgggacg
     1561 aagaccgctg cttctttttc ggaggggagt gtgagaaaat ttcgagcgaa aaatgcaaat
     1621 ccgccgagtg ttgcgagaac tgcgagcacg atcaacggca ttgtcatgac gcgcggtgat
     1681 tcgcggcctt cgcgcgcgtt gtcgctgcgt gggttaccga agaaaacaat gacgagcatg
     1741 cgtatcacgt agaaagcggt caggaacgcg gtgaacaacg ccacggcgaa aatcggcagg
     1801 ttgtgttcgt aagcgaccgc tagaatcgcg tccttactga aaaatccgct gaatggcgga
     1861 cagccgatca acgccagcgc gcccgcgccg aaagtggcaa aagtgatcgg aagtcttcgg
     1921 cgcagaccgc ccatcttcca gatgttctgc tcatgatgaa gcatgacgat gactgagccc
     1981 gcagcgagaa acagaagcgc tttgaaaaac gcgtgagtga aaagatggaa catggcggcc
     2041 tcgtttgagg cgagacccac agccatcacc atgtaaccga gttgcgacag cgtggaataa
     2101 gcgagaatgc gcttgatatc gtcttgctgc gtcgcgatca acgcggccat gaccgctgtg
     2161 atcgtgccga tccatgcgac gatcagaagt gccgtttgtg atgcttgaat gatgaacgcg
     2221 acgcgcacca gcatgtaaac gccggctgca accatcgtcg ccgcatgaat caacgccgag
     2281 actggcgtag gaccttccat cgcgtccggc aaccagacgt ggagcggaaa ttgcgcagat
     2341 tttccgaccg cgccgcagaa aattaagagc gcgacgattg cggcgaacgt tgcatggccg
     2401 ccgaacatcg gcattcgcgg ggcgatctcg gcgaaaacga ctgagccggt ggtcatccag
     2461 agcatcagga tgccagtcat gaatccgaag tcgccaatcc gggtggtgat aaatgcttta
     2521 ttcgctgcgt cggctgcggc gtctcgaaaa aaccagtgac cgatcaaaac atacgatgta
     2581 aacccgacca attcccagaa gatgaaaagc atcacgaaat tgttcgctaa aacgatcccg
     2641 agcatcgcga acatgaagag tgacagcgcg gcgaaatacc gggacttgcc ttcatcgtcc
     2701 cgcatgtaac cgagggacta aatgtgaatg agcgctccga cgccggaaac cacaacggcc
     2761 atcgtcctgc tcaactgatc aagcgttagg ccgagcggca cacgaaagag cggcgggaga
     2821 tcgagccaca cgaactcagg tgccgacgtg gctgactgag cgaagacgaa gcaactacag
     2881 cagaaactta cgagaaccgc agtgatggaa attgtactgc taaatgattt ccaccggagc
     2941 gtgaagagcg tgatgaccat cgcgctcgcg aacggtgcga gaaggattag ccacggatag
     3001 aatgagttca ttgctccgtc caattcgcgg gttagaactt caggctggtg atgtcggcga
     3061 catccgtcgt ttgcctcgca cgatatagcg cgacgagaag cgcgaggccc accgctactt
     3121 cagccgccgc cacggtgatg acgaaaaaaa ctaacacctg tccgtta
//
LOCUS       DATDAJ010000256         3271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1445668, whole genome shotgun sequence.
ACCESSION   DATDAJ010000256 DATDAJ010000000
VERSION     DATDAJ010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1445668"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(258..1217)
                     /locus_tag="VIS53_06450"
     CDS             complement(258..1217)
                     /locus_tag="VIS53_06450"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY5767457.1"
                     /translation="MRWTWPFNGRAGNGQHKHGNGSDADSAGPDFLCVGVHKGGTTWL
                     YQQLDSHPDFWMPPLKELHYFDQLSRVQRSSSSRCRDERDRRFLESINRLSAKPYIDF
                     EHYARLFEQKGPLLSGDISPNYSTLSNKVIRQIIGYFPKLKVIFLARDPVERVWSHLS
                     MEVHYHQIESFDVTDIDEVNRNLLRRGLLLRSYPSAVVARWKRYVHPDGFRIYFFDDL
                     QRNPTELRRSILDFLGADPDKPANRVPASDNSWASMEKLPLTDEVRSHLAQFFKKELK
                     SCAARLGGAARDWPARYGFSLLLSFWDLLDDSIDLFFWCDWIS"
     gene            complement(1267..2268)
                     /locus_tag="VIS53_06455"
     CDS             complement(1267..2268)
                     /locus_tag="VIS53_06455"
                     /EC_number="2.8.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA];
                     GO_function: GO:0050656 - 3'-phosphoadenosine
                     5'-phosphosulfate binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY5767458.1"
                     /translation="MRWSWPFKSRNGNHRNGDGNGHHANGHTGNGHDLNGVSGDARPD
                     FLCVGAQKAGTSWLYRQLEPHPDFWMPPVKELHYLDNLNRTKRQHPPRANDERDTYFV
                     ESIKDMSMRSHIDLDRYGRLFCPKGPLLSGDISPAYSTLSEEIIERVVDHFPNLKVVF
                     LARDPVERAWSQLCMGVRLGVINKFDATDPEEVVRNLLIPGVLARSHPSKIVARWKRY
                     VRPENFRIYFFDDLKENPAELRQSILRFLGGDPDKPSGSLKPHDNNDAGRDKLRLTAK
                     VRDRIAQFFEQELKACAVELGGRARSWPARYGFSLLLYFWNLLDDSIDLFFWCGWVC"
     gene            2355..3065
                     /locus_tag="VIS53_06460"
     CDS             2355..3065
                     /locus_tag="VIS53_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767459.1"
                     /translation="MTQSVGHRIFLLSPAYAGGERARMILRDQAQFPLARQLRGKSGA
                     PIADVFTFLSGLYFRGKIAYAKAFARPARGTSGVLVITPTRGLIDARTRIHLDDLREF
                     AEVDIHEDDPRYRMPIERDARHLATKLPAQSEVILLGSIATGKYVDVLLANFGQRLRF
                     PADFVGRGDMSRGGLMLRCAADLQELSYVPVARAIVNGKRPPKLAPRRYATAVPAYLP
                     KVAPKARSHASLGHRPRN"
BASE COUNT          729 a          898 c          924 g          720 t
ORIGIN      
        1 accgcaatat cagcgtctgc aacaccaggc gttacgcatc gaacgcaaaa ccatcatcca
       61 actgcgaaac gagcgggtga ttaatgatga cgcgttgcgc cgaattcagc gcgacctcga
      121 tctggcggaa gcacggctga tcggagggta gcagcttaaa gactgccacg gccaagctgt
      181 agagtgcgct gtcctcagcg cagtgtctcg cggctcgcaa cagcacgatc cgctgagcac
      241 agcggacgct acagtgccta gctgatccag tcgcaccaga agaagagatc gatgctgtcg
      301 tccagcagat cccagaaaga tagcagcagt gaaaaaccgt atcgcgccgg ccaatctctg
      361 gctgccccac cgagccgcgc cgcacagctc tttaactctt tcttgaagaa ctgcgccaga
      421 tgcgaccgaa cctcatcggt aagcggaagc ttttccatac tggcccaact gttgtcgctg
      481 gccggcaccc ggttggctgg cttgtcggga tcagcaccca gaaaatcgag gatcgaacgc
      541 cgcagttcag tcggatttct ttgcaggtca tcgaagaaat aaatgcgaaa cccgtctgga
      601 tgaacataac gtttccatcg cgcgacgact gcgcttggat aggaacgcaa gagcagccct
      661 cgccggagca aattgcgatt gacttcgtcg atatcggtta cgtcgaacga ttcgatctgg
      721 tggtaatgca cttccatgga caagtgcgac cacactcgct caacggggtc acgcgccagg
      781 aaaatcacct ttaactttgg gaaatatccg atgatttgcc gaatgacctt attactgagc
      841 gtcgaatagt ttggcgaaat atcaccggaa agtagcggtc ccttctgctc gaagagccgg
      901 gcataatgct cgaagtctat gtacggtttg gcactgagcc tgtttatgct ctcgagaaag
      961 cgacgatcgc gctcatctct acagcgcgag gacgatgagc gttggaccct gctcaattga
     1021 tcaaaataat gcagctcctt taaaggaggc atccagaaat cagggtggga gtcgagttgt
     1081 tgatagagcc aggtcgttcc gcctttatgg actccgacac acaaaaaatc gggtcctgca
     1141 ctgtcggcat cggagccgtt gccgtgctta tgttggccgt tgccggcgcg accattgaat
     1201 ggccaggtcc atctcatgct tgattatctt ttcttcggga ttgaaaaagc cagaacgttg
     1261 gcagcgtcag caaacccaac cgcaccagaa gaagagatcg atactgtcgt ccagcaagtt
     1321 ccagaagtac agtagcagtg aaaagccgta tcgcgccggc cagcttcttg cgcgtccccc
     1381 aagttccacc gcgcaggctt tgagttcctg ttcgaagaat tgagctatac ggtcgcgaac
     1441 ttttgcggtg agccgaagtt tgtcgcggcc ggcatcgtta ttgtcatgcg gttttaaact
     1501 gccgcttggc ttgtcgggat cgccgcccag aaaacgcaga atcgattgcc gcagctcagc
     1561 gggattttcc ttcagatcgt cgaagaaata gatacggaaa ttttccggac gaacataacg
     1621 tttccagcgt gcgacaatct tactggggtg cgatcgtgcc agcacgcccg gaatcagcaa
     1681 attgcgaacg acttcctcgg gatctgtggc atcgaattta ttgatcactc caagccggac
     1741 gcccatgcac aattgcgacc aggcccgctc aacagggtcg cgagcgagaa ataccacctt
     1801 caagttcgga aaatggtcga cgactctttc gataatctcc tcgctgagag tcgagtaggc
     1861 cggagaaatg tcacccgaga gaaggggccc tttaggacag aacaaccggc cgtaacgatc
     1921 gagatcgata tggcttcgca tgctcatgtc tttgatgctc tcgacaaaat aagtgtcgcg
     1981 ctcgtcgttg gcgcgcggcg gatgctgtcg cttcgtcctg tttagattgt ccaggtaatg
     2041 gagctccttt actggcggca tccagaaatc gggatgcggc tccagttgcc ggtaaagcca
     2101 cgaggttccg gctttctgcg ctccaacaca taggaagtcg ggacgtgcat ccccgctgac
     2161 gccgttgaga tcgtgtccgt tgccggtgtg gccgttagcg tggtgaccgt taccgtcacc
     2221 gttccgatgg ttaccgttgc gggatttgaa tggccagctc caacgcatcg cccaatattt
     2281 tccattcccg acttaaaaag caagccggga gtgcccgctt gcggcggtct tcggctgggt
     2341 tgaaaatcgc cagtatgacg cagagcgttg gccatcggat tttcctgctc tcgcccgctt
     2401 acgccggggg tgaacgagcc cgaatgattt tgcgcgacca ggcgcaattt ccgctcgcgc
     2461 gacagctgcg cggaaaaagt ggcgcgccaa tcgcggacgt gttcaccttt ttgagcggcc
     2521 tctattttcg cggaaagatt gcctacgcaa aagcatttgc gcggccggcg cgcggaacgt
     2581 caggtgtgct tgtaatcacg ccgacacgcg gtcttatcga tgcgcgaacg cgaattcacc
     2641 tcgatgatct gcgtgaattt gcggaggtcg acattcatga ggacgatccg cgttaccgaa
     2701 tgccaatcga gcgcgacgcg cggcatttgg caacaaaact gccggcccaa agcgaagtca
     2761 ttctcctcgg tagcatcgcc accggcaaat acgtcgacgt gctgctggca aactttggcc
     2821 agcgactgcg atttccggcg gactttgtcg gccgcggcga catgagtcgc ggcggactaa
     2881 tgctgcgttg cgccgcggat cttcaggaac tttcatacgt gccggtggcg cgcgcgattg
     2941 tgaacgggaa acggccgccg aaactcgcgc cgaggagata cgcgactgcg gtgcccgcct
     3001 atctgcccaa ggtagcgcca aaggcgcgtt ctcatgctag cctggggcat cgccccagga
     3061 attgaatggt gcgaaagctg gtgattctgg gaatccgttc tcctcgagcg ttgcccgagg
     3121 ctgttgttga gtcctgcgcc gttggcgctc aaaatctgaa gcgcgagaat tgttttggct
     3181 ctcttcactg gattgcccta tgttggagct ctaagtcttc gtgattgagt gatatggatg
     3241 ttagcggcac gatcggcgca gttctgaatc a
//
LOCUS       DATDAJ010000257         3883 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1453158, whole genome shotgun sequence.
ACCESSION   DATDAJ010000257 DATDAJ010000000
VERSION     DATDAJ010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3883
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1453158"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VIS53_06465"
     CDS             <1..264
                     /locus_tag="VIS53_06465"
                     /inference="COORDINATES: protein motif:HMM:NF042734.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEY5767460.1"
                     /translation="RPSDERGKHLFDVQIPMLFLQGTRDGLASLELLEPLVERLGARA
                     TLKLFQDADHSFHVPARTGLKDAEVRTDMLDALVNWIERVISQ"
     gene            272..970
                     /locus_tag="VIS53_06470"
     CDS             272..970
                     /locus_tag="VIS53_06470"
                     /inference="COORDINATES: protein motif:HMM:NF014017.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5767461.1"
                     /translation="MNLYVGTSGYSYKEWKGTFYPDDLPDKQMLTYYGERFRSVEINN
                     TFYRMPKASVLEAWASVVPPDFKFVLKASQEITHKKRLKDAGDSVTYLLDVAGVLQGH
                     LGPFLFQLPPYMKKDVSRLGEFLKLLPPGYRAAFEFRHQSWFDEEIFSLLRDHRAVLC
                     IAEAENDLEIPFVSTADWGYLRLRRPDYGDAELKAWVERVRGQNWRDAFIFFKHEDEG
                     KGPQMAKRFLELAG"
     gene            complement(1006..1281)
                     /locus_tag="VIS53_06475"
     CDS             complement(1006..1281)
                     /locus_tag="VIS53_06475"
                     /inference="COORDINATES: protein motif:HMM:NF024759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GxxExxY protein"
                     /protein_id="HEY5767462.1"
                     /translation="MKNIKELSDHVRQTAYDIHVYHGHGHLEKVYENALVHRLRNADL
                     DLKQQHPIKVYDEDGTLIGDCLADVLVEGELIIELKTAKTLAPRLLP"
     gene            1413..3749
                     /gene="ligD"
                     /locus_tag="VIS53_06480"
     CDS             1413..3749
                     /gene="ligD"
                     /locus_tag="VIS53_06480"
                     /inference="COORDINATES: protein motif:HMM:TIGR02779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEY5767463.1"
                     /translation="MPARTSQIAQVGKRTIEVSNLTKLLFPDDHIVKAQLIEYYLKIA
                     PTILAHVKGRPLSLVRYPDGIGGESFFQKNRPEWAPDWIEYVTLGEEAKDYTIATEEA
                     SLAWLANLACIELHQMHSRAPHFDKPDYIVYDFDPPENFTFPQVAELALEFKEHLESF
                     GYHPFVKTTGRKGLHVLTPIEPKWDFQKAFETAKALALPFVESHPSALTLQIKKEHRK
                     GKVLLDIYRNRQSQTIVAAYSVRGLPGAPVSTPLQWDELGSIESPKIFDLHNVPERVT
                     QNGDPWEAIAAYATSIHTERTEAKSVKKTLAPARTRKMPEQLESYSAKRSFEKTPEPS
                     PTEIVGHGSAFVVHRHHASRLHYDLRLEQDGVLKSWAVPKGLPPRPGIMRLAVNVEDH
                     PLEYVNFEGAIPKGEYGGGMMWKFAQGRYEITKQKKDGFYFRLQSRELNAEYRIHRTK
                     ENQWLLERVDNPQTDWLREPIEPMLARSVEKPPDSEGYVYEVKWDGIRATISLDEGEM
                     KIRGRNGTDLTKQFPELLIPEQAFRATSALFDGEIVCLDAVGKPHFRNVIHRMQQKTE
                     GAIERARVKYPAVCYLFDCLYLDGRPIVGEPLMRRREWLQDAMRKDTPYRVSEVVEDG
                     AAFFEAVKEIGLEGMMAKQRNSTYLPGKRSDSWLKIKARQTLECVVIGYTRGKGDRET
                     SFGALHLGRANGETRELKYVGKVGGGFDENSLKTVWAELEKLRKIDRPVKEKPLDDAR
                     SIWVEPKLVCEVQFASVTPDGMLREPVFVRLRPDLEFR"
BASE COUNT          918 a          964 c         1136 g          865 t
ORIGIN      
        1 cggccatcgg atgagcgtgg aaaacatctc tttgacgttc agattccgat gctgttcctg
       61 caaggaactc gtgacgggct ggcgagtctg gagcttctgg aacccctcgt cgaacggctt
      121 ggggcgcgcg cgactctcaa gctgtttcag gatgctgatc attcgtttca cgtgcctgcg
      181 cggacgggac tcaaggatgc agaggttaga accgacatgt tggatgcgtt ggtgaactgg
      241 atcgaaaggg taatatcaca gtgaaaagca catgaacctt tacgttggca ccagtggtta
      301 ttcgtacaaa gagtggaagg gcacgtttta ccccgacgat ctgccggaca agcagatgct
      361 tacctattac ggcgagcgtt ttcggtcggt tgaaatcaat aacacgtttt atcgcatgcc
      421 caaggcatcg gtgctggaag cgtgggcttc cgtggttcct cccgatttca agttcgtgct
      481 caaggcatcc caagaaatca cgcacaagaa gcggctaaag gatgcaggtg attccgtgac
      541 gtatcttctc gacgtcgccg gtgtgctgca agggcacctg gggccttttc tgttccagtt
      601 gccgccttat atgaaaaaag atgtatccag gctgggcgag ttcctcaagc tgctgccgcc
      661 aggttaccgc gcggcattcg agttccgcca ccaatcttgg tttgacgaag agatcttcag
      721 cctgctgcgc gatcatcggg cggttctgtg catcgccgaa gcggaaaatg atctggagat
      781 tccgttcgta tccactgccg attggggtta tctgcggttg cgtcggcccg attatggtga
      841 cgcggagttg aaggcgtggg tcgaacgggt gcgcgggcaa aactggcggg acgccttcat
      901 ctttttcaag cacgaagacg aaggcaaggg accgcaaatg gctaagcgat tcctggagct
      961 ggccggctaa ttattcaacc gcaaagaacg caaagaacgc agagatcagg gaagcaaccg
     1021 cggcgctaga gtcttggcgg tctttagctc gatgatcaat tcaccctcca ccaacacgtc
     1081 cgccagacag tctccaatga gcgttccatc ctcatcatac actttgatcg gatgttgctg
     1141 cttcaagtcc aggtcggcat tccgcaaccg gtgtaccagc gcgttctcat aaaccttctc
     1201 caagtgtcca tggccgtggt aaacgtgaat gtcgtaggcc gtctgtcgca cgtgatcgct
     1261 caactccttg atgtttttca tggattcttt aacccgcaaa gatcgcaaag ggaacaaaga
     1321 gaaaacgaat atttcgtcct tccgtcgttg cactctgcgg ttaattcaat ccgtctttgc
     1381 gttctctgcg ctctctgcgg tttattaaat cgatgcccgc acgcacttct caaattgccc
     1441 aggtcggcaa acggaccatt gaggtttcta atctaacgaa acttctattt cccgacgacc
     1501 acatcgttaa ggcgcagctc attgagtact atctcaaaat cgcgccgacg attttggcgc
     1561 atgtgaaagg gcgaccgctg tcgctcgtgc gttatccgga cggcatcggt ggggaatctt
     1621 tttttcagaa aaatcggccg gagtgggcgc ctgactggat cgaatatgtg acgctgggag
     1681 aagaggcaaa ggattatacc atcgcgacgg aagaagcttc ccttgcctgg ctggctaatc
     1741 tcgcgtgcat cgaactgcac cagatgcatt cacgcgcgcc gcatttcgat aagccggatt
     1801 acatcgtgta cgatttcgat ccgccggaaa atttcacatt tccgcaagtc gcggagcttg
     1861 cgctggaatt caaagagcat cttgaaagtt ttggttacca tccctttgtt aaaacgacgg
     1921 gccgcaaggg tttgcacgtg ttgacaccga tcgagccaaa gtgggacttt cagaaagcgt
     1981 tcgaaacggc gaaggctctg gcgctgccgt tcgtggaatc gcacccgtcg gcgttgaccc
     2041 tgcagataaa aaaagagcat cgaaaaggca aggtgttgct ggacatttat cgcaaccggc
     2101 aatcgcagac catcgtcgcc gcgtacagcg tgcgaggact tcccggcgcg ccggtgtcta
     2161 ccccgctgca atgggacgag ttggggtcga ttgaaagtcc gaagatcttc gaccttcaca
     2221 acgtgccgga gcgtgtaacg caaaatggcg atccttggga agcgattgcc gcttatgcga
     2281 catccattca tacggaaagg acagaagcaa aatccgttaa aaagactctc gcgcctgccc
     2341 gaacgcgaaa aatgccggag cagctggaga gttattccgc gaaacgaagc tttgaaaaaa
     2401 cccccgaacc atcacccacg gaaatcgtcg gccacggaag cgcatttgtt gttcaccggc
     2461 atcatgcgtc ccgactgcat tacgatttac gcttggagca ggacggggtt ttaaaatcgt
     2521 gggccgttcc gaaaggcctg ccaccgcggc cgggcattat gcggctggcg gtcaatgtgg
     2581 aggatcatcc gctggagtat gtgaatttcg aaggcgcaat cccgaagggc gaatatgggg
     2641 gtggcatgat gtggaaattt gctcaagggc gctatgaaat cacgaagcag aaaaaggacg
     2701 gcttctattt tcgactgcaa tcgcgggagt tgaatgccga ataccggatt caccggacga
     2761 aggagaatca atggttgctg gagcgcgtgg acaatccgca gacggactgg ttgcgtgaac
     2821 cgattgaacc catgctcgcg cggtctgtgg aaaagccccc ggattcagag ggttacgttt
     2881 acgaagtcaa atgggatggt attcgcgcca cgatttcact cgatgaagga gaaatgaaaa
     2941 ttcgcggccg caacggaacg gatctgacga agcaattccc cgaattgctg atcccggaac
     3001 aggcgtttcg cgctacttca gcgttgtttg acggagaaat tgtctgtctc gacgctgttg
     3061 ggaaaccgca tttcagaaac gtcattcatc gtatgcaaca aaagacggag ggcgccatag
     3121 aacgggccag ggttaagtat cctgccgttt gttatctctt tgattgtctt tacctcgatg
     3181 gacgaccaat cgtcggcgaa ccgctcatgc gccggcggga gtggcttcag gatgcgatgc
     3241 ggaaggacac gccgtatcgg gtgagtgagg ttgtcgaaga cggagccgcc ttttttgaag
     3301 ccgtgaaaga aatcggcctc gaagggatga tggccaaaca acggaacagc acctatctgc
     3361 ctggaaagcg gagcgactcg tggttgaaaa ttaaagcgcg gcagacgctt gagtgtgtgg
     3421 tcatcggcta cacgcgtggc aagggcgacc gggaaacgag tttcggcgcg ctgcatcttg
     3481 ggcgggcgaa cggcgagacg cgagagctca agtatgtggg gaaagtcggc ggcggttttg
     3541 atgagaattc gctgaagacg gtttgggccg aattggagaa actgcgaaag atcgatcggc
     3601 ccgttaagga aaaaccgctg gatgacgcac gatccatctg ggtcgaacca aaactcgttt
     3661 gcgaagtgca gtttgcttct gtgacgccag acgggatgtt gcgcgagccg gtatttgtga
     3721 gactgagacc ggacttggaa tttcggtagg gctggtgtga gcgctggtag ggcggtttcg
     3781 ctgaaaccgc ctgggtgtga gtcgcaacgc tggtagggcg gtttcgatga aaccgcctgg
     3841 gtccacgagg atgaaccaaa aaccaggcgt tttcagcgaa acc
//
LOCUS       DATDAJ010000258         4130 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1462278, whole genome shotgun sequence.
ACCESSION   DATDAJ010000258 DATDAJ010000000
VERSION     DATDAJ010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4130
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1462278"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            152..2917
                     /gene="glnD"
                     /locus_tag="VIS53_06485"
     CDS             152..2917
                     /gene="glnD"
                     /locus_tag="VIS53_06485"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEY5767464.1"
                     /translation="MKASRELDKVLAHAESRLAPTGTRRPTEVLPLYKKFLKVEEHRL
                     RLRHQAGGGGREICGGRAELVDVFLRYVFGAASSAAARGNGEAEVPLALIALGGYGRG
                     ELNPFSDVDVMLLHEQRAEVSPHLKEMVNQILYLLWDSGFKVGHSTRTIKEAIAQANS
                     DMHTKTAMLEARFLAGNTELAAEFRQQFRSKCVVGHERDYVELRMEDQVARHKKFGDS
                     VYLQEPNLKSGCGGLRDYQNLLWITYFKEGSLSTNQLVGKDWLSESDQRRIERAYDFL
                     LRLRTDLHYATGRATDILHMNLQEQIAMRLGYSPRKGQLRSEALMRDCYNHTRNILRV
                     TERITEQFVSGHVTSKTRALFSFLPLTRGHKTPIGDSFFVRNRQLHPARRDVFRNDRE
                     QMMRAFQLAQERDLDLSPELEDLLSRSLRHVTRTYQYARGPRVIFTSILSQKGRVGRI
                     LRMMHRVDFLGRYLPEFGQLTSLVQHEFLHRYTADEHTLVCIDKLDALAETDDPKLIH
                     YRTLFDQFADPLVLYLALLLHDSGKAVGRPHSEASALFAQCVAARLQLSSEQRKSLIR
                     LVDHHLTLSKMAQQRNLDDPATVLEFAQTVKDQKNLDALMLLTLADGQGTSAEAWSDW
                     KESLVWQLFHQTSRYLADRQSYYEQTRIVRESLRASVAQNLSAEYAEEIDAHFEYMPD
                     HYFRATSVPEIIEHVKLFRSFLESVSNAKEFPLAPAVKWKIVPEQGHTVMTFCTWDRE
                     RLLAKIAGSVSVVPLNILSADVFPRGDNTVLGVFRVCDTKAQPVSNRRDFDLVEQTLR
                     QAFEHESFDFVPSIEKAKRSSRRAATGIEFPTRITIDNKTHPTYTLVEFQAPDRIGLL
                     YDVLSCLDRENVLVPLSRINTQAGAAIDTLYVVDGSSHAKITDSQRIRIIQQHLKDAI
                     LRGSTKP"
     gene            2965..3714
                     /locus_tag="VIS53_06490"
     CDS             2965..3714
                     /locus_tag="VIS53_06490"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEY5767465.1"
                     /translation="MNVLILAAGYATRLYPLTLNKAKPLLVVGGKPIIEWLVDNLAGI
                     PDLETIYVVTNDKFAADFQAWSQSYQKRQPEFNFRIVNDGSTGDGDKLGAIGDINFVV
                     TQENLSQTSLLVAAGDNLFTDSLADFVATASNTEVTVAVYDVGDTEAIKKYGNVTVDA
                     EGIMTRFEEKPQKPQGTLAAIALYYYSPAVLSLLRTYLAAGNNADQPGRFVQWLYTRK
                     PVKTFEIKGRWLDIGSKETLENANKILRAPR"
     gene            complement(3778..>4130)
                     /locus_tag="VIS53_06495"
     CDS             complement(3778..>4130)
                     /locus_tag="VIS53_06495"
                     /inference="COORDINATES: protein motif:HMM:NF028108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5069 domain-containing protein"
                     /protein_id="HEY5767466.1"
                     /translation="DKARLHRKGLLDGYNYRTVGFDKHLLAFLKIDGEAFEDVANKLN
                     DDQAILAWVQKNGEQHSPEGIEQWNEAMISRHPDTAAKKARFLHFLKEAGGDGRKDIR
                     TYFDLIEFDEGRLK"
BASE COUNT          960 a         1127 c         1116 g          927 t
ORIGIN      
        1 aaatactgat tgttttgtag cgtccgctgt cctcagcgga gtcttaattg aggcaaaccg
       61 ccggtgcgct gatgacagcg ccaccctaaa acgcgacgca aattttggct tttggatttg
      121 cgactctaaa ttgttcgtaa cagagcaggc gatgaaagca tctcgagagc tggacaaagt
      181 tttggcacat gccgaaagcc gcctcgcgcc tacaggcaca cggcgtccca ccgaagtcct
      241 cccgctatac aaaaaatttc tgaaggttga agagcaccgg ttacgcctga ggcaccaggc
      301 tggtgggggc ggacgcgaga tttgcggggg tcgagcggaa ctcgttgatg ttttcttgcg
      361 atacgtcttc ggagctgcat cgtctgcggc ggctcgtgga aatggcgaag ctgaggtgcc
      421 gctggcgctt attgctcttg gcggatatgg ccggggcgag ctcaatccgt tcagcgacgt
      481 tgacgttatg ctattgcatg agcagcgcgc agaagtttcg ccgcacttaa aggagatggt
      541 gaaccaaatc ctctacctgt tgtgggacag cggattcaag gttggacact ccacgcgtac
      601 gatcaaagaa gccattgcgc aggccaacag cgacatgcac acaaagactg ccatgctgga
      661 ggcgcggttt ctcgcgggca acacagagct cgcggcagaa tttcggcaac aatttcgttc
      721 taaatgcgtc gtcggacacg aacgcgacta cgtcgagcta cgcatggagg accaggtcgc
      781 ccggcacaaa aaatttggcg acagcgttta tctgcaagag ccgaacctga agagcggctg
      841 tggcggattg cgcgattatc aaaatctgct ttggattacc tacttcaaag agggctcgct
      901 gagcacaaac caactcgtcg ggaaagactg gctgagcgaa agcgaccagc gccgaatcga
      961 gcgtgcgtac gattttcttc tgcggttgcg cacagacttg cattacgcga ccgggcgcgc
     1021 caccgacata ctgcacatga atttgcagga gcagatcgca atgcgactgg ggtattcacc
     1081 tcgaaaaggc cagcttcgaa gcgaggcgct tatgcgggac tgctacaatc acacgcgaaa
     1141 tattctgcgg gtgacggaac gaatcacgga acagttcgtg agcggacatg ttacgagtaa
     1201 aacgcgcgct ctgttcagtt ttctcccgtt aacacgaggg cacaagactc cgattggtga
     1261 ttccttcttt gttcgaaaca gacaactgca tccggcacgg cgcgatgttt tccgcaatga
     1321 ccgcgagcag atgatgcgcg catttcaact ggcgcaggag cgtgacctcg atctcagccc
     1381 ggaactggaa gacttgttga gcagaagcct gcgccatgta acccgaacgt atcagtatgc
     1441 gcgcgggccc cgtgtgattt ttacatcgat tttgtcccag aaaggcagag tcggacgcat
     1501 cctgcggatg atgcatcggg tagactttct tggccggtac cttcccgaat tcggccaact
     1561 cacctccctt gtgcagcacg agttcttgca ccggtatact gccgacgagc acacgctggt
     1621 gtgcatcgac aaacttgatg cattagcgga gaccgacgat ccgaagctga ttcattatcg
     1681 cacgttgttt gaccaattcg cggacccact ggttctgtat ctcgcacttc tcctgcacga
     1741 cagcggcaag gctgtgggcc gtccacactc cgaagccagc gcgctgttcg cccagtgcgt
     1801 tgcggcgcgt ctgcagttgt cctcagagca gcggaaatcg ctgatacgcc tcgtcgatca
     1861 tcacctcacc ttgtccaaaa tggcgcagca acggaatctc gatgaccccg caacagtctt
     1921 ggaatttgcg cagactgtga aagaccagaa aaacctcgac gcgctcatgt tgcttacact
     1981 cgctgacggc cagggcacaa gcgccgaggc atggtcggac tggaaggaat cgctggtctg
     2041 gcaattgttt caccagacct cccgttatct cgccgaccgc cagtcttatt acgaacaaac
     2101 cagaatcgtg cgtgagagcc tgcgcgcttc tgtcgcccag aatctttcag cggagtatgc
     2161 ggaggaaatt gacgcgcatt tcgaatatat gcccgatcat tatttccgcg cgactagcgt
     2221 gccggagatc atcgagcacg tgaagttgtt ccggtctttt ctggagagcg tttccaacgc
     2281 gaaggagttt ccgctcgctc cggcagtgaa atggaagatc gtgcccgagc agggccacac
     2341 ggtgatgacg ttctgcacct gggaccgcga acggctcctg gcaaaaatcg cgggctcagt
     2401 ttccgtcgtg ccgttgaaca ttttaagcgc cgatgttttc ccgcgcggcg ataacacagt
     2461 gctaggcgtt ttccgcgtgt gcgacaccaa agcgcagccc gtttccaatc ggcgcgattt
     2521 tgaccttgtc gagcaaacac tgcgtcaagc tttcgagcac gagagcttcg acttcgtccc
     2581 atccatcgaa aaagcgaagc gctcgagccg tcgcgctgca acgggaattg aatttcccac
     2641 tcgcatcacg atcgacaaca agacgcatcc cacttacacg ctcgttgagt ttcaagcccc
     2701 ggaccgcatc ggtctgcttt acgatgtcct cagctgcctc gatcgcgaaa atgtcttggt
     2761 accgctttct cgaattaaca cccaggctgg cgcggcgatc gacacactgt acgtggtgga
     2821 cgggtccagc catgccaaga tcaccgattc gcagcggatt cggatcattc agcagcattt
     2881 gaaagatgct attctgcgcg ggtcgacaaa accgtagaga aaacacgagc gtttttctgc
     2941 tttgctgcga actcttttga tctcatgaac gttctgattc tcgctgcggg atacgcaacg
     3001 cgtctttacc cactgacgct gaacaaagcg aaaccgctgc tcgtagtcgg cggtaaacca
     3061 atcatcgaat ggctggtgga caatctcgcg ggcattcccg atttggaaac gatttacgtc
     3121 gtgaccaacg acaaattcgc ggcggacttc caggcgtgga gtcagagcta tcaaaagcgc
     3181 caaccagaat ttaatttcag gattgttaat gacggttcca cgggcgatgg cgacaagctg
     3241 ggcgcaattg gagacattaa ttttgtcgtc acgcaggaga acctttccca gaccagcttg
     3301 ttagtcgccg ccggcgacaa tttgtttacc gattcgctgg cagatttcgt agcgaccgcg
     3361 agtaacaccg aagtgaccgt tgcggtttac gatgttggcg acactgaagc gatcaagaag
     3421 tacgggaacg tgaccgttga tgccgaagga atcatgaccc ggtttgagga aaaaccgcaa
     3481 aagccccagg gaacactcgc cgcgattgcc ctatattatt attcgcctgc ggttctctcg
     3541 cttttgagaa catatctggc tgcagggaac aatgcggatc agcccggccg ttttgtgcag
     3601 tggctctaca cccgaaaacc ggtgaagacg ttcgagatca aaggccgatg gctcgacatc
     3661 ggaagcaaag aaacgctcga gaacgccaac aaaattctgc gagcgccgcg ttgaagcgtt
     3721 aaatcgtcaa tggtcgaatc gtttcacccc gatgtaacgg tttaacgaat cacgccttta
     3781 tttcagtcgt ccttcatcga actcaatcag atcgaaatac gtccgaatat ctttacgtcc
     3841 gtcgccgccg gcttctttga gaaaatgcag aaaacgcgcc ttttttgcgg ccgtatcggg
     3901 atggcgcgaa atcatagcct cgttccattg ttcgatgcct tcgggcgaat gttgctctcc
     3961 atttttctgc acccaagcaa gaattgcctg gtcgtcattc agcttgttgg cgacgtcttc
     4021 gaacgcttct ccgtcgattt tgagaaacgc gagcaagtgc ttgtcgaaac cgacggttct
     4081 atagttgtaa ccgtccagca agcctttgcg atgcagcctt gccttgtcga
//
LOCUS       DATDAJ010000259         2986 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1467045, whole genome shotgun sequence.
ACCESSION   DATDAJ010000259 DATDAJ010000000
VERSION     DATDAJ010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1467045"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /gene="pdhA"
                     /locus_tag="VIS53_06500"
     CDS             <1..896
                     /gene="pdhA"
                     /locus_tag="VIS53_06500"
                     /inference="COORDINATES: protein motif:HMM:TIGR03182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEY5767467.1"
                     /translation="QYQAQKIGGFCHLYIGQEAVVVGAIAAVRPDDYVITAYRDHGHA
                     LARGTSANACMAELFGKETGCSRGLGGSMHFFDKRHNMYGGHAIVAAHVPLGVGLAFA
                     IKYRGEDRVTLCFFGDGAINQGSFHEALNLAALYRLPIIFICENNLFAMGTSVKRSTS
                     LKQIVDRAEGYDIPGEIVDGMNFREVRDKVAEVADSIRKESHPAFLEVRTYRYRGHSM
                     SDPASYRTKDELEKYRLDDPIIRLRAQLTREGKLTNEQFDQLDKRAKEAVLAAVKFAE
                     ESPELPVEKLHDYVYFNGAES"
     gene            893..1876
                     /locus_tag="VIS53_06505"
     CDS             893..1876
                     /locus_tag="VIS53_06505"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEY5767468.1"
                     /translation="MREITYRQALNEALAEELERDPNVFLMGEEVAEYQGAYKVSAGL
                     LERFGPRRIIDTPISENGFAGLGIGAAMVGLRPIIEFMTFSFSLVAFDQVVNNAPNMF
                     MMSGGQFNIPITFRGPNGPAHQLGATHSHATENFYASVPGLKVCTPATPRDAKGLLKT
                     AVRDDNPVLVLEAELLYSSKGMVEPPDEELLIPLGKAEVKREGSDVTVVCYSQTVPIA
                     LKVAAQLEEEDSSAEIVDLRSIKPLDEKAIFDSVAKTHHVVIVEQDHPFCGVGAEICY
                     RIQKNIFDELDAPILRVSQEDIPMPYNEDLEHAVLPNAEKLVAAVKQVCYA"
     gene            1962..>2986
                     /locus_tag="VIS53_06510"
     CDS             1962..>2986
                     /locus_tag="VIS53_06510"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEY5767469.1"
                     /translation="MPEIQMPKLSDTMTEGTLVAWKKKKGDQVSAGEVLAEIETDKAT
                     MEWESPEDGTLTEIYVQEGGKVNIGDKIAFIRGEGEEAPKQEAPTQKKKTEGVSEKKP
                     QAETEKPAPVEAADKETAPPQEKDVGTAVSAARAETTQQKPQTREQKSEETRVKASPV
                     ARRVAAELGVDLSTVKGTGPDGRVTETDVRGAAKSVGAGIDRGGAKTATKSAPVKSGE
                     TARIQLSGMRKIIAQRLVESLGPVPHFYLTIDINAGPLMESREELKSAGEGADAAKIT
                     VNDFVLKAAVMAAVKVPRVNGSFDNDAIVQYADVDLGVAVAIEDGLLTPVIRAAQDKS
                     LREISALA"
BASE COUNT          744 a          754 c          903 g          585 t
ORIGIN      
        1 agcagtatca agcgcagaag attggcggct tttgtcacct ttacatcggt caggaagctg
       61 tggtggttgg cgcgatcgct gccgtgcggc cggatgatta cgtaatcacc gcttaccgtg
      121 atcacgggca tgccttggcc cgaggcacga gcgcgaatgc atgcatggcg gagctttttg
      181 gaaaagagac cggctgctcg cgtggactcg gcgggtcgat gcattttttt gacaagcgac
      241 acaacatgta tggcggccac gcgattgtag ccgcgcatgt accgctgggg gttgggttgg
      301 cctttgccat caaataccgg ggcgaggatc gcgtcacgct ttgcttcttc ggcgacggcg
      361 cgatcaatca ggggtcgttc cacgaagcgt tgaatctcgc tgccctgtac aggctgccga
      421 tcattttcat ttgtgaaaac aatctcttcg ccatgggcac gtcggtgaaa cgatcaacat
      481 cgctcaagca gatcgtggat cgggcggagg gttacgacat ccccggtgag atcgtcgatg
      541 gaatgaactt ccgcgaagtc cgcgacaaag tcgccgaggt tgccgattcg atccggaaag
      601 aatcgcatcc ggcgtttctg gaagtacgca cgtatcgtta tcgtggccat tccatgtcgg
      661 atcccgcaag ttaccgaacc aaggacgaac tggagaagta tcgccttgat gatccgatca
      721 ttcgtctgcg tgcgcagctt acgcgcgagg gaaaattgac taacgaacag tttgatcagc
      781 tcgacaagcg cgctaaggaa gcagtgctgg cagcagtaaa gttcgccgaa gaaagtccgg
      841 aactaccggt cgagaaactt cacgattatg tgtatttcaa cggagctgag tcgtgagaga
      901 aatcacgtat cgtcaggcgt tgaatgaagc gctcgctgaa gagctcgagc gtgatccaaa
      961 cgttttcctg atgggagagg aagtggccga atatcaggga gcgtacaaag tgagtgccgg
     1021 gttgctggag cgctttggac caagacgcat catcgatacc ccgatcagcg agaacggatt
     1081 cgccggtttg ggcattggcg cagcgatggt cgggctgcga ccaattattg agttcatgac
     1141 gttcagcttt tcactggtgg ctttcgacca ggtggtgaac aacgcgccaa acatgttcat
     1201 gatgtcaggc ggccaattca atatcccgat tacgtttcgt ggacccaacg gcccggcgca
     1261 tcagcttgga gcgacgcact cgcacgccac agaaaatttc tatgccagtg ttcccgggct
     1321 gaaagtttgc acaccagcga cgccgcgcga tgccaagggc ttgttgaaga ctgcggtgcg
     1381 cgacgacaac ccggtgttgg tcctcgaagc ggaactgctt tacagctcaa agggaatggt
     1441 cgagccgccc gatgaagaac tgcttatccc attgggaaag gcggaggtga aacgcgaggg
     1501 cagcgacgtc accgtcgtct gttactcgca gactgttccg atcgcgctga aagtcgcggc
     1561 gcaactcgaa gaggaagata gttccgccga gatcgttgat ctgcgctcga ttaaaccgct
     1621 cgacgagaag gcgattttcg attctgtcgc gaaaacgcat cacgtggtga ttgttgaaca
     1681 ggaccatccg ttctgcggtg tcggcgcaga aatttgctac cggattcaaa agaatatttt
     1741 cgatgagctg gatgcgccga ttctacgcgt atcacaggaa gacattccga tgccttataa
     1801 tgaagacttg gagcacgctg tcctgccgaa cgccgagaaa ctcgtcgccg ccgtgaaaca
     1861 ggtttgctac gcgtgaatca attaaagaga tacggaagtt acacggtcaa agcgggctcg
     1921 ttgtaacgat gtaactcttg taaccgttta acttcttaac catgcctgaa atccaaatgc
     1981 cgaaactgag cgacacgatg accgaaggca cgcttgtcgc gtggaagaaa aagaagggcg
     2041 accaggtctc ggccggcgaa gtgctcgccg agatcgagac cgacaaggcg accatggaat
     2101 gggagtcacc cgaggacggg acgctcaccg aaatttatgt ccaggaaggc ggcaaggtga
     2161 acatcggcga taaaatcgcg ttcatccgcg gagaaggcga ggaagcaccg aaacaggaag
     2221 cgccaacaca gaaaaaaaag acagaaggcg tgtcagaaaa gaagccgcaa gcggaaacgg
     2281 agaaacccgc gccggtagag gccgcagaca aagaaactgc gccgccgcag gaaaaggatg
     2341 tagggacggc tgtgtcagcc gcccgagctg agacgacaca acaaaagcct cagacgagag
     2401 aacagaaatc cgaagaaacc cgcgtgaaag cgtcgcctgt tgcgcgacga gtcgcagcgg
     2461 agcttggcgt ggatctttcc acggtgaaag gaacaggacc tgacgggcgt gtgacagaaa
     2521 ccgacgttcg cggtgcggcg aaatctgtag gcgcgggcat tgaccgcggc ggcgcaaaaa
     2581 ctgcaacgaa aagcgctcct gttaagtctg gcgaaactgc gcgcattcaa ctttccggaa
     2641 tgcgcaaaat aattgcgcaa cggcttgtcg agagtctcgg cccggttcca cacttctatc
     2701 tcacgatcga catcaatgcg ggaccgctga tggaatcgcg tgaggaattg aaatctgctg
     2761 gcgaaggcgc ggatgccgcg aagatcacgg tgaacgattt tgttttgaaa gccgcagtga
     2821 tggctgcggt gaaggtgccg cgcgtgaatg gctcgttcga caacgacgca attgtgcagt
     2881 acgcggacgt cgatctcggc gtcgcggttg cgatcgaaga cggactgctg acaccagtca
     2941 ttcgcgcggc gcaagacaaa tcgcttcgcg agattagcgc gttagc
//
LOCUS       DATDAJ010000260         3010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1475058, whole genome shotgun sequence.
ACCESSION   DATDAJ010000260 DATDAJ010000000
VERSION     DATDAJ010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475058"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            177..521
                     /locus_tag="VIS53_06515"
     CDS             177..521
                     /locus_tag="VIS53_06515"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5767470.1"
                     /translation="MKRESPTIEICPGIARRTVAHGNTMYQMLATLAAGSQMPAHSHP
                     QEQIVHILEGKMRLIVEGVPHELSTGDSFYLASNVPHGVETLSATRVLDTFSPPRTDY
                     LAIDEKVLHGAL"
     gene            complement(562..1539)
                     /locus_tag="VIS53_06520"
     CDS             complement(562..1539)
                     /locus_tag="VIS53_06520"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEY5767471.1"
                     /translation="MSVCITRADEKPKMRAVVAHEYGAPDVLKIEQVQRPEPNDDEAL
                     VRVIASSVNPADPLTLSGKYAKEFGTHLPLIPGYDIAGVVEKTGANVTKLKVGDAVYG
                     YPTFGGGWADYVTVKEWEVAAKPKSLNFVEASAVPMGALTAWQALVDVAKLQPGQTIL
                     IHGGSGGVGSFAVQIAKARGAHVIATASTANQDLLKQLGADVAIDYTKTKFEDTAKDV
                     DAVLDPVGKDTLARSYGVVKKGGIVMSLVARPDPAELQKHGIRGAGISAHPNADDLTE
                     IAQLIDTGKIKPPVTEVRPLTDAVKAQQQAATHHTRGKVVLRIADEPKG"
     gene            complement(1674..1970)
                     /locus_tag="VIS53_06525"
     CDS             complement(1674..1970)
                     /locus_tag="VIS53_06525"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEY5767472.1"
                     /translation="MRNTFVVISSAGPKRDLSKGTREQPLWDEHAAFIDQLVAEGFIL
                     MGGPLVDENGAMLIVNADDENEVREKLKSDPWMKHGVLKLESVKRWQIFIDVRK"
     gene            2147..>3010
                     /locus_tag="VIS53_06530"
     CDS             2147..>3010
                     /locus_tag="VIS53_06530"
                     /inference="COORDINATES: protein motif:HMM:NF016983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HEY5767473.1"
                     /translation="MSAHAADQNSGLRRIILVLFALGVVSMVSLIVAGATSLISLADR
                     IHPVAGTFVFWGLCLAAGFLALYCVIAYAQLPPALVPPKETSGPKHEAYLQTLRSRLA
                     NNPRTRELSLSTNADVEAAIAHLSKEADVVVRRTASTVFLSTALMQNGRLDGLIVLFT
                     QIQMVGRIARIYVQRPSPRELLRLYLNVGGTAFVASSLESLDLGEMVAPLAVSVVPAL
                     KSGIPGLSGISALLVKCVSNGAANAFLTLRVGEVARRYCELTSRHSPEAIRRSATAAA
                     VQHLGRIVRENG"
BASE COUNT          623 a          848 c          833 g          706 t
ORIGIN      
        1 gaacagaatt gtgattaatg acgtaaaggt tttcatggcg gcatgttgcc agaattcggt
       61 gacgggtgac aagtgcgaac gaatcaggaa aacaagataa taagttcgtt tcggcgtggc
      121 gcgtgctctc cccggaagat tcgcgccgct aatgcttctc gcgtagaatt ctggacatga
      181 aacgagaaag tccgacgatt gaaatttgtc ccggaatcgc gcgccggacc gtcgcacacg
      241 gcaacacgat gtatcagatg ctcgccacgc tagcggctgg gagtcagatg cctgcgcact
      301 cgcacccgca ggagcagatc gttcacattc tcgaaggaaa aatgcggctg atcgtcgagg
      361 gcgtgccaca tgagctgtca accggcgatt ctttttatct cgcgagcaat gttccccatg
      421 gtgtggagac gctttcggcg acgcgcgtgc tagatacctt cagtccgccg cgcactgatt
      481 atctggcgat agacgaaaaa gttctccacg gagcgttgta ggggttcggg cgtaacaaag
      541 cagccactca aaaacgggcg attatccttt tggctcgtct gcgatccgga gcacaacttt
      601 tccgcgcgtg tgatgagtcg cggcttgttg ctgcgccttc actgcatcag tcagcggacg
      661 aacttcggtc actggtggtt tgattttccc tgtatcgatt agttgcgcga tctcagtgag
      721 atcgtcggca ttgggatgag ccgagatacc cgcgccgcgg attccatgtt tttgaagctc
      781 ggccggatca ggtcgcgcga ccagcgacat aacgatgccg cccttcttta ccacgccgta
      841 cgaacgcgcg agcgtgtctt tgcccaccgg atcgagcacg gcgtccacat ctttggcggt
      901 atcttcaaac tttgttttgg tgtaatcaat cgccacgtct gcgccgagct gcttgagaag
      961 gtcctgattt gctgtcgagg cagtggcaat gacgtgcgca ccgcgcgctt ttgcgatctg
     1021 caccgcaaaa ctaccgactc cgccagagcc cccgtgaatg aggattgttt gcccaggctg
     1081 gagtttcgct acatccacca aggcctgcca tgcagtcaac gcacccattg gaaccgccga
     1141 ggcttccaca aagttgagtg acttcggttt tgcagcgact tcccactctt tcacggtcac
     1201 gtaatccgcc cacccaccgc cgaaagttgg ataaccgtaa accgcgtcgc cgactttgag
     1261 cttggtgacg ttggcgcctg ttttttccac gacgccagcg atgtcgtagc ccgggatcag
     1321 cggcaagtgc gtgccaaatt ccttcgcata ttttccgctg agcgtgagcg gatcggctgg
     1381 attgacgctg ctggcgatca cgcgcacgag cgcttcgtcg tcgttcggtt ctggtcgttg
     1441 cacctgttca atcttgagca catcgggcgc gccgtattcg tgggctacca ccgctcgcat
     1501 ctttggcttt tcgtcagccc gcgttatgca gacagacaca actccgagag cggttaagat
     1561 caaaaaacag agcgttgatc gagcgaattg catgacgtca cgttcgcgcg cgatcggctt
     1621 cagtgcgaac tggaaaatct tttcccgcgc gctgtcagca cgccgaacgt tacctacttc
     1681 cggacatcga tgaagatttg ccagcgcttg acactctcca gcttgagaac gccatgtttc
     1741 atccacggat cgctttttaa tttctctcgc acttcattct cgtcgtcggc attgacgatc
     1801 agcatcgcgc cgttttcatc gaccaaaggt ccacccatca aaataaaacc ctcggcgacg
     1861 agttgatcga taaatgcggc gtgctcgtcc caaagcggct gctctcgcgt gccctttgac
     1921 agatcacgct tcgggccggc ggaagaaatt acgacaaatg tatttctcat ggacatgcga
     1981 ttagattttt tcatccacag attggcacag attaatgttg tagggcgttt gtgccaaacg
     2041 cctggcgtct cgcagagacg ccctacagtt cctgattgcc tgattagcgt cgcccccaag
     2101 aagccaattg cagccgccca aactcggtgg agagttatac cgacaaatga gtgcacatgc
     2161 agcagatcaa aattcgggtc taaggagaat catcctggtg ctcttcgctc taggcgtggt
     2221 ttcaatggtg tcgctgatcg tcgccggtgc gacgagcttg atctcgctag ctgacaggat
     2281 tcacccggtc gctggtacgt ttgtgttctg gggactttgt ctggcagcgg gatttcttgc
     2341 gctctattgc gtgatcgctt acgcgcagtt gccgccagca ctcgtgccgc caaaggaaac
     2401 gtccgggccc aagcacgagg cttatttgca gacgttgcgt tcgcggctgg cgaataatcc
     2461 ccggactcgc gagttgtcac tgagcacaaa cgcggacgtt gaggcagcca tcgcgcacct
     2521 gtccaaggaa gcggacgtgg ttgtgcgcag aacggcgagc acagtttttc tcagcaccgc
     2581 gttaatgcaa aatggccggc tcgacggcct catcgtgctg ttcacacaaa ttcaaatggt
     2641 cggccgcata gcacgcattt acgtgcagcg gccttcgcct cgcgaattgc tgcggttgta
     2701 tctgaatgtt ggcggaacag ctttcgtcgc cagcagcctc gaatcgctgg acctcggaga
     2761 aatggtcgca ccgcttgcgg tgtcggtggt tcctgcattg aaaagcggaa ttccaggatt
     2821 gagtggcatc tcagcgctcc tggtgaaatg cgtttcaaac ggcgccgcga acgcgttcct
     2881 tacgttgcgc gtgggtgaag tcgcgcggcg ctattgcgaa ctcacatcgc gccattcacc
     2941 tgaagccatc cgcagatctg ctactgccgc ggcggtccaa catctcgggc gaatcgttcg
     3001 cgaaaatggc
//
LOCUS       DATDAJ010000261         3214 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1475664, whole genome shotgun sequence.
ACCESSION   DATDAJ010000261 DATDAJ010000000
VERSION     DATDAJ010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3214
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1475664"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..710
                     /locus_tag="VIS53_06535"
     CDS             <1..710
                     /locus_tag="VIS53_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /protein_id="HEY5767474.1"
                     /translation="LSFQCRDGGWAAFDKDVTTEWLEDMPFADHNAILDPTCSDLTAR
                     TLELLGYIGFDRNAKCVRDAIEYLVATQDDDGSWYGRWGVNYIYGTWQVLRGLRAIGE
                     DMTQDWILRGRDWLESCQNNDGGWGETCGTYENPSTKGIGPSTASQTAWAIMGICACG
                     DLDRPSVQRGLRYLLRSQKPDGSWDEDEITGTGFPRTFYLKYDMYRQNFPLLALGTYV
                     NHCSGVGYHSGFYRCDR"
     gene            794..1393
                     /locus_tag="VIS53_06540"
     CDS             794..1393
                     /locus_tag="VIS53_06540"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002387688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEY5767475.1"
                     /translation="MAYELPKLPYAYDALEPHIDARTMEIHHTKHHQAYIDNVNKAIK
                     GTDLEKKTVEDLISDLNAVPENIRTVVRNNGGGHANHSFFWKIMGPNAGGEPKDKLAD
                     DIKSAFGSFDQFKEKLSTAGVGRFGSGWAWLIKNKNGGLEIVSTPNQDSPLMDGNTPI
                     LGVDVWEHAYYLKYQNRRADYLKAWWNAVNWDAIAKNYS"
     gene            1570..2811
                     /locus_tag="VIS53_06545"
     CDS             1570..2811
                     /locus_tag="VIS53_06545"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEY5767476.1"
                     /translation="MAYLNENYLKLQAGYLFPEVARRVREFCEAHPEGAKRLIRCGIG
                     DVTEPLPAAAIEAMKRAIDELGHRESFRGYGPEQGYEFLRSTIAQRDYRDRNIQIAAD
                     EIFVSDGSKNDCGYVLDILGDQNKVAVPDPVYPVYVDTNVMVGHTGRARKDGSYEGIY
                     YLACTAENNFVPEPPKEHVDLVYLCFPNNPTGAVASRAQLASWVNYAHEHNALLLFDA
                     AYEAYISDPEIPHSIFEIPGALTCAIELRSFSKNGGFTGVRCGFTVMPKSVLARTTDG
                     RRLPLHPLWQRRWSTKSNSVAYPVQRGAEALYSGDGRKQVRELIDHYMGNAKILRDAA
                     ADAGLEAFGGVNAPYIWVKTPDGLTSWQLFDRMLRELNVVITPGAGFGAQGEGYFRIS
                     AFNSRENAEEVARRLKCLRSS"
     gene            2881..>3214
                     /locus_tag="VIS53_06550"
     CDS             2881..>3214
                     /locus_tag="VIS53_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767477.1"
                     /translation="MREVFRGPSGVPERKQNLPQLYRFCFLMLGDSRKAQEVFHATLR
                     EAAMRAARGELPSERFWLFRDARWRCLEATKTDLQPESVEMDERDIAPKAESQIQCLD
                     PMQLAIWIS"
BASE COUNT          750 a          845 c          917 g          702 t
ORIGIN      
        1 agctgagttt ccaatgtcgc gacggcggct gggctgcctt cgataaggat gtcacgacag
       61 aatggctgga ggacatgcca tttgcggatc acaacgcgat actcgatccc acctgcagcg
      121 atttgactgc acgcacgctc gagttgctcg gttacatcgg tttcgatcgc aatgcgaaat
      181 gcgttcgcga cgcaatcgaa tatttagtcg ccactcagga tgacgatggt tcgtggtacg
      241 gacgctgggg agtgaattac atctacggta cctggcaggt gctgcgtggc ctgcgggcaa
      301 tcggcgaaga tatgactcag gactggattt tgcgcggacg cgattggctc gagagctgcc
      361 aaaacaacga cggcggctgg ggtgaaacct gtggcacgta cgaaaatcca tccaccaaag
      421 gaattggccc aagcactgcg tcgcaaaccg cctgggcgat tatgggcatc tgcgcctgcg
      481 gcgacctgga tcggccgagc gttcagcgtg gcttgcgtta ccttcttcgc tcgcaaaagc
      541 cggacggctc atgggatgaa gatgaaatca ccggcaccgg tttcccgcgc acgttctatt
      601 tgaagtacga tatgtatcgc cagaatttcc cgctcttagc tctcgggaca tatgtgaatc
      661 attgcagcgg ggtggggtat cactcagggt tttatcgctg cgaccgttag acggcaacgg
      721 cagcgatggg ccgtcggttc cggccgaaaa taagacctat cgttcggcgt aattcgatct
      781 aacagtaacg attatggctt acgaactacc caaattaccc tatgcatatg atgccttgga
      841 gccgcacatc gatgcgcgca caatggaaat tcaccacacc aagcatcacc aggcttacat
      901 cgacaacgta aacaaggcga tcaagggcac cgatctggag aagaaaactg tggaagacct
      961 gatcagtgac ctcaatgctg tcccggaaaa tattcgcaca gtcgtgcgca acaatggcgg
     1021 tggtcacgcc aatcactcgt tcttttggaa gatcatgggg ccgaacgccg gcggtgaacc
     1081 taaagacaaa ctcgccgatg acatcaaatc cgcgtttggc agcttcgatc agtttaaaga
     1141 aaaactcagc actgccgggg taggccgttt cggcagtggc tgggcatggc tgatcaagaa
     1201 caagaatgga gggctcgaaa ttgtctccac gccaaatcaa gacagccctc tgatggacgg
     1261 caatacgccg attctcggcg tcgatgtgtg ggagcatgcg tattacttga agtatcaaaa
     1321 ccgccgggcc gattacctca aggcatggtg gaatgccgtt aactgggacg cgatcgcgaa
     1381 gaactactcg tagctgcgga atcggcgatc tggggagcgc acgcattcct gcgtgctggt
     1441 gaaggcattt tgccttcaca aacttttctt tggattcggg tatcaggaat gacgagaatc
     1501 cagaagaaag ttcgcgaacg caaaatgcat tcgccagcac gctacaagcg tgcgctacca
     1561 ggaatagacg tggcttactt aaacgaaaat tatcttaagc ttcaggccgg ctatctcttt
     1621 ccagaggtgg cgcgccgcgt gcgcgaattc tgcgaagccc atcccgaagg tgccaagcga
     1681 ttgatccgct gcgggatcgg tgatgttacc gagccgcttc ctgccgcagc tatcgaagca
     1741 atgaagcgcg cgatcgatga gctgggacac cgcgaaagtt ttcgcggcta tggtccagaa
     1801 cagggctacg agtttctcag atcaaccatc gcgcaacgcg actaccgtga tcgaaatatt
     1861 cagattgctg ccgacgaaat tttcgtttct gacggatcaa aaaacgattg cggttacgtg
     1921 ctcgatattc tcggcgatca aaacaaggtc gctgtccccg atccagtcta tccggtgtac
     1981 gtggacacaa acgtgatggt ggggcacacg ggccgggccc gaaaggatgg cagctacgag
     2041 ggcatttatt atttggcctg cacggcggaa aacaatttcg tgcccgaacc ccctaaggag
     2101 cacgtcgatc tcgtctatct ttgttttcca aacaatccaa ctggtgcagt cgcatcgcgc
     2161 gcgcagctcg caagctgggt caattatgcc cacgaacata atgcgctctt gctcttcgat
     2221 gcggcatatg aggcgtacat ttccgatcct gaaattccgc attctatttt cgagatcccg
     2281 ggtgcgctca cgtgcgcgat tgagttgcgc agcttttcga agaacggcgg cttcaccggt
     2341 gtgcgctgtg gatttaccgt gatgccgaaa tcggtgctcg cgcggacgac cgacggtcgt
     2401 cggctcccac tgcacccgct ttggcagcgt cgttggagca cgaaatcgaa cagtgtcgct
     2461 tacccggtgc aacgcggcgc tgaagctttg tattccggtg acggccgtaa acaggttcgt
     2521 gagctgatcg atcattacat gggcaatgcc aaaattcttc gtgacgctgc ggctgatgct
     2581 ggcctggagg ctttcggagg agtcaacgcg ccttacatct gggtgaaaac accggacggc
     2641 ctgacaagct ggcaactgtt cgaccggatg ctgcgcgagc tgaacgtcgt catcacaccc
     2701 ggcgcgggtt tcggcgcaca aggtgaaggt tactttcgca tctccgcgtt caacagcaga
     2761 gaaaacgccg aggaagtggc gcggcgtttg aaatgtctgc gaagctcgtg acacagacaa
     2821 ttttgtctgc gcatcaaatt tgcgcacgca ggattgcctg cgtcatcgca gtcacgtaga
     2881 gtgcgcgaag tttttcgggg accatctggc gtgccggaac gaaaacaaaa tctgccacag
     2941 ctttatcgct tttgtttcct gatgcttggc gactcgagga aagcacagga agtttttcac
     3001 gcgacgttgc gtgaggctgc gatgcgggct gcccgcgggg aactgccgag cgaacggttc
     3061 tggctattcc gcgacgctcg atggcgctgc ttggaagcga ccaaaactga cttgcaaccg
     3121 gagtcggttg aaatggacga acgcgatatt gctccaaagg ctgaatcaca aattcagtgc
     3181 ctcgatccca tgcagctggc gatttggatt tcag
//
LOCUS       DATDAJ010000262         5572 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1483363, whole genome shotgun sequence.
ACCESSION   DATDAJ010000262 DATDAJ010000000
VERSION     DATDAJ010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5572
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1483363"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1127)
                     /locus_tag="VIS53_06555"
                     /pseudo
     CDS             complement(1..1127)
                     /locus_tag="VIS53_06555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013225067.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            complement(1477..1599)
                     /locus_tag="VIS53_06560"
     CDS             complement(1477..1599)
                     /locus_tag="VIS53_06560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767478.1"
                     /translation="MLALPDGVYEMQGAGPEAPRAETNRYPQKFRITIVEFLVA"
     gene            1639..3117
                     /locus_tag="VIS53_06565"
     CDS             1639..3117
                     /locus_tag="VIS53_06565"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY5767479.1"
                     /translation="MDDTLQLGFPLWVRLTHFFNFLFITLLIRSGIEIIGAHPKFYWR
                     DDSLPGSEWFRFTKKRLPKDQLWTSEEEVEPISSWTALPGENNLGLGRHWHFWAVNGW
                     LLAGLTYVVLLFATPQWRRLLPTSCDVFPAAWQAIVAYFYFRLPPEGNPFNAIQQLTY
                     CFIIFILSPLQIVTGMMMSPALGARFPWFPRILGGRQAARSLHFIGLIVFSGFILVHV
                     SLVFAHGFAREMTKIVLGDEASSYALATIIGLLAIAAVIVFHIWGTRYSLVSPSQAKR
                     LLEIGIDPLRRLLFRPWDSRQEYLRVSAYARINGKPPRNEVYERLAAANFTDWRLEVG
                     GLVEKNLSLSLNDLHQMRRQTQTTLHCCIQGWSYFAQWAGVSVSSIIDMCEPLPNARF
                     LVFHSLDEKWERPGHGYYYEVIDLELGIQPQTILAYEMNGQPLPIPHGAPLRLRVENQ
                     LGYKMAKWINRIEIVNSFKHIGKGEGGWRDDLLHYYPLNAGL"
     gene            complement(3269..4360)
                     /locus_tag="VIS53_06570"
     CDS             complement(3269..4360)
                     /locus_tag="VIS53_06570"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY5767480.1"
                     /translation="MNTPLVESIRETIRAQGPQSFAWFMQKALYHPEHGYYSSGRCAI
                     GRKGDYFTNVSVGALFGQLLALQFSEIWERLGKVNDFVIVEQGAHDGQFALDVLEFAQ
                     KRLPEFFEALVYRILEPFPILEEQQRRSLEAFGEKVKWPDSAEPFIGVHFSNELLDAM
                     PMRLISNGTEKLVGLDGDEFVFVERQVDKAVLNESALDWMDEIAATLQRGYVIAIDYG
                     CTDEDFRRSVQVRAQHRNLHSPFDSIGEADITMSVDWRSIVERARANGLRVAGFTDQH
                     HFLTGILAQFGRGGSPEPPAGDWGQSPLPDSRKAKRELHTLLHPEMLGRAFQVLALAK
                     SVDPETNPLAGFKFVAESRSSLRLTDSVQ"
     gene            4497..>5572
                     /locus_tag="VIS53_06575"
     CDS             4497..>5572
                     /locus_tag="VIS53_06575"
                     /inference="COORDINATES: protein motif:HMM:NF013106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY5767481.1"
                     /translation="MKPTKTYLRPPPGYRFRPPWYLRPWFYIPVAIVAVMALFMTVFF
                     SSVVVDLQTQANSFDLSKLEQMESASVILDRNGKIFGQIYVENRETVPYEKLAPDLIN
                     AVIAVEDAKFYEHHGYDLFGIVRAALKNLTAGHVRQGGSTITQQLARNSFSLKERTYR
                     RKLLEIFLAKRIEDNFSKQKILELYLNRIYFGGGMYGAEAAARGYFGKSARDMTLAEC
                     ATLAGLIKSPNRLNPWSDRANSRETRDFALDRMRDNGFISREQCAAARAEKIAVGSRQ
                     NAQGQTYAVDYIRQQVIAAVGWDRAINEGYRIHTTIDVNLQRTAEDSLKAHLEQVEKH
                     PEYNHQTYADYAASFRKAKSSGKMA"
BASE COUNT         1244 a         1555 c         1493 g         1280 t
ORIGIN      
        1 atgctctgca cgcccaccga gtgctgcgtc caccccccgg cgtagcagat ggcgccggtg
       61 cgctcggggc ccgaggcgct gcagacggcc tcggcgacgc gcaggaactc cgccgccggc
      121 acgccgcagg cgcgctccac catctccggc gtgtagcgcg cgaaatggcg tttcagtttt
      181 tggaagacac attgtggatc tcgtaaagtg aaatcccgct cgggaaagct gaggccttcg
      241 cccttatata gccagctttg catcgagtaa ttgcgttcgc cttcattcca accggagaaa
      301 aaaccatccg ctttgtcttc cggatcttga taatcgtcgc gcaaaatgca ggaagcattt
      361 gtatagctga cgacgtactc accgaagaac agctcgttct cgatgatgtg tctgacgagt
      421 ccgccaagga acgcgatatc gctgccggcg cggatcggca cccagatgtc ggccagcgcg
      481 ctcgtgcgcg agaaacgtgg atcgacatgg atgatcgtgg cgccccgttc cttcgctttc
      541 atcacccagc gaaaaccgac cgggtgggct tcggccatcg aagaaccttc gatcagaatg
      601 caatctgcgt tagccagatc ctgttgcgcg gttgtagctc cgccccggcc gaaggaggtg
      661 cccagaccgg gcaccgtgct gctatgtcat atccgggcct ggttggacac acagaccatg
      721 cccaggcctc cggtgaaaag ctttttaatg agataatttt cctcgttatc cagtgtggcg
      781 ccgccgagat gacataccgc cgtcgtgtga ttgatagaaa cgccgtcttg ctcgtgcaca
      841 aatgtgcgct tgcgcgattc ccacacgcgg tcggcaacca tgtccattgc gcggtcgagt
      901 ggaatttctg tccactcttt tgatcgcggt gcgcggtgtt tcactttcgt ttcgcgccgc
      961 gaatgcgtta gcaactgata ggatgccgcg cctttcggac aaagattccc ctggctgatc
     1021 ggcgactccg gatcgccctc aattgaaatt agttttccgt ctttgtgata aatcaattgg
     1081 ccgcagccaa cgccacagta gggacaaatg gatcgcgcga cgttcgcgcc atcgatgcgc
     1141 gcgtgcatcg cgcgcgtttt ttccgacatt gattcaagac cagtgccgtc cttgcgtttg
     1201 cgaatctgcc gcatcaacgg ccatttggaa aagaaggaaa acatcaagaa gtcatcgtgc
     1261 gggtaattac ggttggatgt tcgatggcgg gcgactgagt tcacctggcg tccgccacat
     1321 cgatgatatc aacaccgcaa aagagacaca atacgggaaa tctgttaatc gtgttgtgcg
     1381 ttgatttcga aactgcaatg aacatgctgc aatcagaggt gctcgatcta atttgattgg
     1441 aaaagcggca ttgtgttttt cctgggaaag agccaatcac gcaaccagga actccacaat
     1501 agtaatccga aacttctgtg ggtagcggtt cgtctcggcg cgcggtgctt cgggtccggc
     1561 gccctgcatc tcgtaaacgc catccggcaa agccagcatg tgcgataaat acagaatcac
     1621 acgccgacga ttcgcgttat ggacgatacg ctccaactcg gatttccgtt gtgggtccga
     1681 ttgacccact tcttcaactt tctcttcatc acgttactca ttcgcagcgg aatcgagatc
     1741 atcggtgcgc atccgaagtt ttattggcgc gacgactctt tgccaggaag cgaatggttc
     1801 cgcttcacga aaaaacgact gccaaaggac cagctctgga cgtcagagga ggaagttgag
     1861 ccgatttctt catggaccgc tttgccggga gagaacaacc ttggcctggg tcgtcattgg
     1921 cacttctggg ccgtgaacgg ctggctgctg gctggtttga cttacgtcgt cctgctcttc
     1981 gcgacacctc agtggcgacg tcttctgcca acgtcgtgcg acgtcttccc ggcggcgtgg
     2041 caggctatcg tggcctactt ctattttcga ctgcctcctg agggaaatcc gttcaatgcg
     2101 attcaacaac tcacctactg tttcattatt ttcatcctgt cgccgcttca aattgttaca
     2161 ggaatgatga tgtcgccggc gctgggtgcg cggttccctt ggtttcccag aatattaggc
     2221 ggccggcaag cggcacgaag tctccacttc atcggactga tcgtctttag tggtttcatc
     2281 ctcgttcatg tcagcttggt gtttgcacat ggttttgccc gtgagatgac gaaaatcgtt
     2341 ctcggagacg aagcctcgtc ttacgcgctc gccacgatca tcgggctatt ggcgattgct
     2401 gccgtgatcg tcttccatat ttggggaacg aggtattcgt tggtctcgcc ctcgcaagca
     2461 aagcgcttgc tggaaatcgg cattgatcct ttgcggcggc ttctttttcg tccttgggat
     2521 tcgcggcaag agtatctgcg cgtttctgcg tatgcgcgta tcaatggaaa accgccgcgc
     2581 aacgaagtgt atgagcgcct ggccgcggcc aatttcacgg actggcggct cgaagtaggc
     2641 ggtttggtag aaaaaaattt aagtctctcg ctcaatgatc tgcatcaaat gcggcgccag
     2701 acacaaacca cgttgcactg ctgcatccaa ggttggagct actttgcgca gtgggcgggc
     2761 gtctcggttt cctcgattat agacatgtgc gagccgctgc cgaatgcgcg gtttctcgtt
     2821 ttccactctt tggatgagaa atgggagaga ccaggtcacg gatattacta cgaagtaatc
     2881 gatttggaac tcgggatcca gccgcagacc attctcgcat atgaaatgaa cggccaaccg
     2941 ctaccgattc ctcacggagc gccgctgcga ttgcgtgtgg agaatcaact ggggtacaaa
     3001 atggccaaat ggattaaccg catcgagatc gtgaacagct ttaagcacat cggcaaggga
     3061 gagggcggtt ggcgcgatga tttgctgcat tactatccgc tgaatgccgg cctttgagca
     3121 acgcaatttg tcagtttgat gtaagaggag aactgcgggt cggctccgcc gagctgggcc
     3181 atgaaacagc ttcttcaaaa aagaatcgcg agtgcaacca gactggcacg cccgcagtgc
     3241 gtgtgggccg cggcaccgtc acggtcggtt actgaaccga atccgtgagc cttagcgaag
     3301 agcgcgattc ggccacgaat ttaaaacccg ccagcggatt cgtttccgga tcgacgcttt
     3361 tcgcaagcgc gagcacttgg aaagcgcggc ccagcatttc cggatgaagc agcgtgtgca
     3421 attcgcgctt cgccttgcgc gaatcaggta ggggcgattg accccaatcg cccgcgggcg
     3481 gttcaggtga accgccccta ccgaactggg cgaggattcc cgttagaaaa tgatgttgat
     3541 cggtaaatcc ggcgacgcgc aatccgtttg cccgcgcacg ttcgacaatg cttctccaat
     3601 ctacagacat cgtaatatcc gcctctccga ttgaatcgaa cggcgaatgg agatttcgat
     3661 gttgggcgcg gacttgaacg cttctacgaa aatcctcgtc cgtgcagccg taatcgattg
     3721 caatcacgta gccacgctgc agagtcgccg cgatttcgtc catccagtcg agcgcggatt
     3781 cattaagaac cgccttatca acctgccgct cgacgaatac aaattcgtcg ccgtcgagac
     3841 ctaccaattt ttccgttcca ttactgatca agcgcatcgg cattgcgtcc agcagttcgt
     3901 tggaaaaatg gacgccaatg aatggttccg ccgagtctgg ccacttcacc ttttccccaa
     3961 acgcctcgag gctccggcgt tgctgctctt ccaaaattgg aaatggctcg agtattcggt
     4021 agaccaatgc ctcgaagaat tctggtaggc gcttttgcgc gaactccaga acatccagcg
     4081 cgaactgccc atcgtgtgcc ccctgctcga caatgacgaa atcatttacc ttgccgaggc
     4141 gttcccagat ttcggagaac tgcaaggcca gtaattgccc aaagagcgcc cccacgctca
     4201 cgttcgtgaa ataatctcct ttccggccta tcgcgcagcg gcctgacgaa taataaccgt
     4261 gctccggatg atagagggcc ttctgcatga accaggcgaa cgattgcgga ccttgtgcgc
     4321 ggatcgtttc acggatcgat tcaaccagcg gcgtgttcaa ttggagaacg tcgaacgctg
     4381 aacgctcaac gtccaattcc tcaatttgca atattcaact tgcgcccccg cttggaaact
     4441 gaacgttgag ccttgggcgt ttggcgccta ccttcgctac cgagtcgttt gcctgcttga
     4501 aaccgaccaa aacatacctc agaccgccgc cgggctatcg ctttcggccg ccgtggtatt
     4561 tgaggccatg gttttatatc cccgtcgcga ttgtggccgt gatggccttg tttatgacag
     4621 ttttcttttc cagcgtcgtc gtcgatctac aaacgcaggc caactctttc gacttgagca
     4681 agctcgagca aatggaatcg gccagtgtga ttctcgatcg caacgggaag atctttggcc
     4741 aaatctacgt cgaaaaccgc gagacagtcc cttacgagaa gttggcgccc gatctgatca
     4801 acgccgtcat tgcagtcgaa gacgcaaaat tttacgagca ccacggctac gatttgttcg
     4861 gcatcgttcg cgcagcgctc aaaaatctga cggccggcca tgtgcgccag ggcggcagca
     4921 ccattacaca acagctggcg cgcaacagtt tctcgctcaa agaaagaaca taccgccgga
     4981 agctgctgga gatttttctg gccaagcgca tcgaagacaa ttttagcaaa cagaagattc
     5041 tcgagttgta tctgaaccgg atttatttcg gtggcggcat gtatggagcg gaagcagccg
     5101 cgcgtggtta ctttggcaag tctgcacgcg atatgacgct agcggagtgc gccacacttg
     5161 caggcctgat caaaagtcca aaccgattaa acccatggtc tgaccgggct aattcgcgcg
     5221 aaacacgcga cttcgccctc gatcgaatgc gcgacaatgg attcatcagc cgtgaacaat
     5281 gcgctgccgc gcgcgccgaa aaaatcgctg tcggcagcag gcaaaacgct caaggccaga
     5341 cttacgccgt cgattacatc cgtcagcaag tgatcgcagc cgtgggatgg gatcgcgcaa
     5401 tcaacgaagg ctatcgcatt cacaccacga tcgacgtcaa tcttcagcgt acggccgagg
     5461 attctctaaa ggcacacttg gaacaagttg agaaacatcc cgaatacaat catcaaacct
     5521 acgccgatta cgcggcatcg tttcgtaagg ccaaatcaag cggtaaaatg gc
//
LOCUS       DATDAJ010000263         5081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1488403, whole genome shotgun sequence.
ACCESSION   DATDAJ010000263 DATDAJ010000000
VERSION     DATDAJ010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5081
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1488403"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..1160)
                     /locus_tag="VIS53_06580"
     CDS             complement(144..1160)
                     /locus_tag="VIS53_06580"
                     /inference="COORDINATES: protein motif:HMM:NF005741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HEY5767482.1"
                     /translation="MKLATTYLGLKLRTPFVLSASPLSEKLDNIKRMEDAGAAAVVFH
                     SLFEEQLRPANHPMRRSSGNGGEFSRDALDDYSDEPDFKVDPEAYVNHIAKAKEAVRI
                     PIIGSLNGSTFGGWQRYARLIEQAGADALELNIYNVPMDPERSADDIETEYLTIVTSI
                     KSLLKIPVAVKLSPYFTNLSQFARRLDEQGANALVLFNRFYQPDIELETLEVSPNVLL
                     STPMALRLPMRWIALLYGRIGANLAATSGIHHGVDALKMIMAGADVTMLCSVLLRHGI
                     DHIRVLEHEMREWLEEHEYESIEQIKGIMSQKSCPDPTAFERAQYTRALKSYPRSPSS
                     TAAS"
     gene            complement(1275..2276)
                     /locus_tag="VIS53_06585"
     CDS             complement(1275..2276)
                     /locus_tag="VIS53_06585"
                     /inference="COORDINATES: protein motif:HMM:NF005741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase-like protein"
                     /protein_id="HEY5767483.1"
                     /translation="MNLTTRYLGFKLRTPLVPSASPLSEKIDNIKRMEDAGASAVVFH
                     SLFEEQIRRDHHDLEFYLEQGTESYAESLSYFPVRPEFKVGPEAYLEHISQAKAAVDI
                     PIIGSLNGSTFGGWLGYARRIEQAGADALELNIYSIPSDPDIRGEDIEAHYLSILAAI
                     KAEVKIPVAVKLSPFFTNFARFAREADRNGANGLVLFNRFYQPDIELETLEISPNILL
                     STPMAMRLPMRWIAMLYGRIGASLAATSGIHRATDALKMLMAGADVTMLCSVLLRRGI
                     EHIRVIEREMREWMEEHEYESVEQLKGSMSQKNCPDPSAFERAQYMRALETYPAADV"
     gene            complement(2273..>5081)
                     /gene="nifJ"
                     /locus_tag="VIS53_06590"
     CDS             complement(2273..>5081)
                     /gene="nifJ"
                     /locus_tag="VIS53_06590"
                     /inference="COORDINATES: protein motif:HMM:TIGR02176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEY5767484.1"
                     /translation="DRFADLTGRRYGLFEYHGATDAERVIVLMGSGCEAVHETVDFLN
                     AQNEKVGVLKVRLYRPLDAQAFVKMLPANVRHIAVLDRTKEPGAGGEPLYLDCVNTLH
                     EQGPANLEVVGGRYGLSSKEFTPAMIKAVFENLAQPTPKNHFTVGIEDDLSHTSLDVD
                     PSFSIEPDDVVRAQFFGLGSDGTVGANKESIKIIGENTDHFAQGYFVYDSKKSGAMTI
                     SHLRFGPRPIRSTYLITKANFVACHQAFLLETSDVLRDLAPDGTFLLNSSLGPDHVWG
                     RLPENAQRRLIEQRAKFFVIDGNKVARDAGMGGRINTVMQTCFFAISGVLPSQQAIEA
                     IKDSIRKTYGKKGDEVVEMNLRAVDQTLAHLYEVKIPDAVVPIAPGGNGELKRAPEFV
                     RNVLGEIIAGRGDRVPVSALPNDGTYPTGTTQFEKRNLATEVPVWDSAVCIQCGRCVM
                     VCPHGVIRSKAYELAVLHGAPSSFKSAEARLPEWKGLKYTLQVAVEDCTGCGICVDVC
                     PARNKSEARLKAINMQPQLPLRESERANWNFFLSIPEMDRRQISTDHVRKMQVQQPLF
                     EFSGACAGCGETPYIKLLTQLFGDRLIIANATGCSSIYGGNLPTTPYTKDQNGRGPAW
                     ANSLFEDNAEFGLGFRVSVDKQQEFAGELLQQLSPQVGRNLATEILNARQRDEADIFD
                     QRERVTELKRKLGSLGNPIAKRLLAVADTLVRKSVWIVGGDGWGYDIGYGGLDHVLAS
                     GRNVKVLLLDTEVYSNTGGQCSKSTPRAAVAKFASGGKRAPKKDLGLMAMTYGTIYVA
                     SVAMGARDEHTLKAFLEAEAYDGPALIIAYSHCIAHGINMTTAMQNQKAAVNTGQWLL
                     YRYNPERLPLGENPLQLDSAAPRVKLADFFKLEQRFKILEKSEPRAARDLLEQAQADV
                     NARRAFYEFLATRKLNTTPNQ"
BASE COUNT         1020 a         1486 c         1414 g         1161 t
ORIGIN      
        1 cgaagattag ctggcgcgca ttagtgacga agcgcgattc ctgggccgtt tcatctgcgg
       61 ccttcgcagg gacaaaaagg acaacagcaa aaaaaacgga aaccgcagcc tttgtccctt
      121 tggccacgcc gcgatgtagc gcattacgac gccgcggtcg aggacggact cctcggatag
      181 ctcttcagcg cacgtgtgta ttgcgcgcgc tcaaacgccg ttgggtccgg gcagcttttc
      241 tggctcataa tgcctttgat ttgctcgatc gattcgtatt cgtgttcctc cagccactcg
      301 cgcatttcgt gctcaaggac acggatgtgg tcgatcccgt gccgcaacag cactgagcac
      361 agcatcgtta catcggcgcc ggccatgatc attttcagcg cgtcgacgcc gtgatggatc
      421 ccgctcgtgg cggccagatt tgcgccgatt cgtccataca acaatgcaat ccatcgcatc
      481 ggcagacgca acgccatcgg cgtgctcaga agcacgttcg gactgacctc gagcgtctcc
      541 agttcgatgt ccggctggta aaagcggttg aacaacacaa gtgcattggc gccttgctcg
      601 tcgaggcgtc gggcaaactg tgaaagattc gtgaaatacg gactgagctt caccgccacc
      661 gggattttca gcaggctttt gattgaagtg acgatcgtca aatattccgt ctcaatatca
      721 tcggcgctgc gctccggatc catcggcaca ttgtagatgt tcaattccaa cgcgtcggct
      781 ccggcttgtt cgataagtcg ggcataccgt tgccagccgc caaaggtgga cccattcaag
      841 ctgccgatga tcgggatgcg caccgcctcc ttcgcttttg cgatgtgatt tacgtacgcc
      901 tccggatcga ctttgaaatc cggttcgtcg gaataatcgt ccagcgcgtc gcgcgagaat
      961 tcaccgccat tcccggaact gcggcgcatg ggatgatttg ccggacgaag ctgttcctca
     1021 aacagcgagt ggaaaaccac tgccgccgcg cccgcgtcct ccatgcgttt aatgttatcg
     1081 agcttttccg acagcggcga cgccgacaga acaaacggcg tccgcagttt caatccaaga
     1141 taagtagtag ccagtttcat gggaatgcct ccaacgttga tctaagggtg ttgttattgg
     1201 aaaaatcata gtcgctgcaa gccagagcga tgtaccgcga ttgcgttttg ctgtgcagtt
     1261 attgcgcagg cgttttaaac atccgccgcg ggataggtct cgagcgcgcg catgtattgg
     1321 gcgcgttcga aggcgcttgg gtcgggacaa ttcttctggc tcatgctgcc tttgagttgc
     1381 tccactgatt cgtattcgtg ctcttccatc cattcgcgca tttcgcgttc gatcacccga
     1441 atgtgttcga tcccgcgacg caacagcact gagcagagca tcgtcacgtc ggcgcctgcc
     1501 attaacattt ttaacgcgtc cgtcgcgcga tggatcccac ttgtcgccgc caggctcgcg
     1561 ccaatgcgtc cgtagagcat cgcgatccag cgcatcggca agcgcattgc catcggcgtg
     1621 ctgagcagga tgttgggtga aatttccagc gtctcgagtt caatatccgg ctgatagaaa
     1681 cgattgaata gcaccaaccc attggcgccg ttccggtcgg cctcgcgtgc gaaccgcgcg
     1741 aagttcgtga agaacgggct aagcttgacc gccaccggga ttttcacctc cgctttgatc
     1801 gcggcgagaa tgctgagata atgggcttcg atatcttccc cgcgaatgtc tggatcactc
     1861 gggatggagt agatgttcag ctccagggca tcagcgcccg cttgttcgat ccgccgcgcg
     1921 taacctagcc agccgccaaa ggtgctgccg tttaagctac cgatgattgg gatatcgacc
     1981 gccgctttcg cctgcgaaat gtgctccagg tacgcttccg gcccaacctt gaactcgggc
     2041 cggacaggaa aatagctcag cgattccgcg taagattccg tgccctgttc aaggtaaaac
     2101 tccaagtcat gatgatcgcg gcgaatctgc tcttcaaaaa gtgaatggaa cacgactgcc
     2161 gaagcgccgg cgtcttccat tcgcttaatg ttgtcgatct tttccgacag cggcgaagcc
     2221 gatggcacta gaggcgtgcg taacttaaag ccgagatatc tggtcgttag gttcattggt
     2281 ttggtgtggt gttgagtttt ctcgtggcga gaaattcgta gaacgcgcgg cgagcgttca
     2341 cgtctgcctg cgcctgctcg agcaagtccc tcgcagcgcg gggttcgctc ttctcgagga
     2401 tcttgaatcg ctgttcgagt ttgaagaaat ccgcgagctt tacgcgcggc gcggcggaat
     2461 cgagctgaag tggattttct ccgagcggca gccgctcggg attgtaacgg tacagcagcc
     2521 actgtcccgt gttcactgct gctttctggt tttgcatggc cgtggtcata ttgatgccgt
     2581 gcgcaatgca gtggctgtaa gcgatgatga gcgccggtcc gtcgtatgcc tccgcttcga
     2641 gaaatgcctt caacgtgtgc tcgtctcgcg cgcccatcgc gactgaggcg acgtagatgg
     2701 tgccgtaagt catcgccatc agtccgagat cctttttcgg tgcgcgcttc ccgccggagg
     2761 cgaacttcgc gacggcagcg cgcggcgttg attttgagca ttgtcccccg gtgttggaat
     2821 acacttcggt gtcgagcagc aacaccttca cattacgacc gctggcgaga acgtgatcga
     2881 gtcctccgta accgatgtcg taaccccaac cgtcaccccc gacgatccag acgctcttgc
     2941 gcacaagcgt gtcggccacg gcgagcaagc gttttgcgat cggattgcct aacgagccga
     3001 gtttgcgctt cagctcggtg acacgctcgc gttggtcgaa tatgtccgct tcgtcgcgct
     3061 gtcgcgcatt caagatttcg gtggcaagat ttcggccgac ctgtggtgac agctgctgga
     3121 gcagctcccc ggcaaactcc tgttgcttgt cgactgaaac acgaaagccg aggccgaact
     3181 ccgcgttgtc ctcaaatagt gaattcgccc atgccggacc gcggccgttt tgatctttcg
     3241 tgtagggcgt agttggcaaa ttgccgccgt aaatggagga gcatccggtc gcgttcgcga
     3301 tgatcaaccg atcgccgaac agctgagtga gcaatttgat gtacggcgtc tcgccgcaac
     3361 cagcgcacgc tcccgagaac tcaaataacg gctgttgcac ctgcattttg cgcacgtgat
     3421 cagtcgaaat ctggcggcga tccatttccg ggatcgaaag aaagaaattc caattggcgc
     3481 gctcggattc acgcagcggc aactgcggct gcatgttgat cgctttcaat cgcgcttcgg
     3541 atttgttgcg cgccgggcaa acatccacgc agatcccgca gccggtgcaa tcttccactg
     3601 cgacttgcag cgtgtatttc aaccctttcc actccggtaa ccgcgcctcc gccgacttaa
     3661 acgaagaagg cgcaccatgg agaacagcta gctcatacgc tttgctccga ataactccgt
     3721 gggggcagac catcacgcac ctgccgcact ggatgcagac tgccgagtcc cagaccggca
     3781 cttcggtcgc gagatttcgc ttctcgaatt gcgttgtgcc cgtcggatac gtcccatcgt
     3841 taggcaacgc gctcaccggg acgcgatcgc cgcgacccgc gatgatttcg cccagcacat
     3901 tgcgcacaaa ctccggtgcg cgcttgagtt ctccgttgcc tccaggcgcg attggaacaa
     3961 ccgcgtccgg aattttcact tcgtacaaat gcgcgagcgt ttgatcaacc gcccttagat
     4021 tcatctctac gacctcgtcg ccctttttcc cgtacgtttt gcgaatggaa tctttgatgg
     4081 cctcaatcgc ttgctgtgag ggcaggacgc cggagatggc gaagaaacag gtctgcatca
     4141 ccgtgttgat gcggccgccc atccctgcat cgcgcgccac cttgttgccg tcgattacaa
     4201 agaacttcgc gcgctgctcg atcagccggc gctgcgcatt ttccggcagt cgaccccaca
     4261 cgtggtcggg tccaagcgac gagttcagca ggaacgttcc atccggcgcg agatctcgca
     4321 gaacgtcact tgtttcgaga agaaatgcct gatggcaggc aacgaagttt gcttttgtga
     4381 tgaggtacgt cgaacgaatt gggcgcggac cgaagcgtag atgcgagatg gtcatcgcgc
     4441 cggacttctt cgaatcgtaa acgaaatagc cttgcgcgaa gtggtccgtg ttctcaccaa
     4501 tgattttgat tgattccttg ttcgcgccca cggtgccgtc ggatccaagc ccgaagaact
     4561 gcgcgcgcac aacatcgtcc ggctcgatcg agaaactcgg atccacatct aggctcgtgt
     4621 gcgagagatc gtcctcgatg ccgaccgtga aatgattttt tggtgtcggt tgcgcaagat
     4681 tctcgaacac cgctttgatc attgccggcg taaattcctt cgacgacaag ccgtagcggc
     4741 cgccgaccac ttccaggttg gcggggccct gctcgtgaag cgtattcacg caatcgagat
     4801 agagcggctc gcctcccgct cccggctctt tcgtacggtc gagaacagcg atgtgacgca
     4861 cattcgcggg caacattttg acgaaggcct gtgcgtccaa tggccgatac agtctcacct
     4921 tcaggacgcc cactttctcg ttttgggcgt tgagaaaatc gacggtttcg tgcaccgcct
     4981 cgcagcctga gcccatcaaa acgattacgc gctcggcgtc ggtcgcgccg tgatattcga
     5041 acaaaccgta ccgccgcccg gttaagtctg cgaatcggtc c
//
LOCUS       DATDAJ010000264         3988 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1489612, whole genome shotgun sequence.
ACCESSION   DATDAJ010000264 DATDAJ010000000
VERSION     DATDAJ010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489612"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VIS53_06595"
     CDS             complement(<1..551)
                     /locus_tag="VIS53_06595"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase 3"
                     /protein_id="HEY5767485.1"
                     /translation="MKRQPRSNPRSHKTLRTVSIVGTGSYVPEKVLTNEDLSRMVDTS
                     DEWITTRTGIKERRMAAKDENTSDMAAKAALNAIEQSKISVKEIDLILVATATPDMLF
                     PATACFVQKKIGAKNAACLDISAACAGFIFGLEIAQQFITSHTYETVLVIGADKLTSI
                     TNWTDRNTCVLFGDGAGAAVLRHR"
     gene            complement(514..1545)
                     /gene="plsX"
                     /locus_tag="VIS53_06600"
     CDS             complement(514..1545)
                     /gene="plsX"
                     /locus_tag="VIS53_06600"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEY5767486.1"
                     /translation="MKIALDAMGGDFGPPNLVAGAVMALRDYKQINKLYLVGDSAKVE
                     NELRKHQCNDSRIEIVHSTQVVDMSDRAWTAVRRKKDSSISRAVDLIKRGDADAVVSA
                     GHTGAAVAASTIKLRTLPGIDRPGIAAVLPTEKNVFVLIDAGANIDARPEHLLQYAFM
                     GSVYSRHVLHYKNPTVGLVSLGDEDVKGTELTKEVFKMLKPSSLNFIGNIEGRHLFED
                     PVEVVVCDGFVGNVILKTCESIAVAMFQWLKHELMRTRMRKVGAFLARNAIGTIKEKT
                     NYEEYGGSPLLGVNGICIIAHGASTPLAVKNALRVAGESIEQQVNPHIVEEIRRYHET
                     TAPLEPALS"
     gene            complement(1657..1863)
                     /gene="rpmF"
                     /locus_tag="VIS53_06605"
     CDS             complement(1657..1863)
                     /gene="rpmF"
                     /locus_tag="VIS53_06605"
                     /inference="COORDINATES: protein motif:HMM:TIGR01031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEY5767487.1"
                     /translation="MMLWYAPAMGVPKRKTSKMRLRTRKAANRWHTSQLNKCPQCGSS
                     VPSHIACPSCGYYRGRQVLTLKGK"
     gene            complement(1945..2391)
                     /locus_tag="VIS53_06610"
     CDS             complement(1945..2391)
                     /locus_tag="VIS53_06610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767488.1"
                     /translation="MKVHLNQIPPQGLHLSGEEDCPIHELASEEILCAGPLHYDIDVG
                     VADGGLWANGSLSQPVELRCVSCLEKFVHEIRVPAFAVHTALHGPETVDLTPSVREDL
                     LLNLPAHPHCDRDGDRVCKAKQLKTEEQDANRESDWSALDKLKLKR"
     gene            complement(2410..2889)
                     /gene="coaD"
                     /locus_tag="VIS53_06615"
     CDS             complement(2410..2889)
                     /gene="coaD"
                     /locus_tag="VIS53_06615"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEY5767489.1"
                     /translation="MRRAIYPGSFDPVTNGHLDVIERARKLFDEVVVAVAHNDEKQPL
                     FSLEQRLDLLRETAGQIENVRIAEFSGLLVEFARAQNAGAVIRGLRAVSDFEFEFQMA
                     LMNRNLNAAVETIFLMPKEEYTYLSSRIVKEIARLGGNISTFVPDCVAKALSGKFSQ"
     gene            3022..3849
                     /locus_tag="VIS53_06620"
     CDS             3022..3849
                     /locus_tag="VIS53_06620"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5767490.1"
                     /translation="MRDSSPYKTIAVATTFSPRFKHVLAEAKRIRDRFGAELHLIHVG
                     NRDQETPKKFSDVLAELDLPADSPIHYEKGEPAEAILAALARENIDVLVAGALEKEIV
                     LHPFLGNVARRLVREANCSVMLFTHPQKKPEPLRRIVFIADHSQQGLVALKTTLMLAE
                     AESCERLYVIGIITAFDDARASIAGDATAGPPHQPNQGDEDPLEEFVLSAGATEVPIE
                     TRFIRGATGLAASDFVRSVEADLLVVPFPKSRETVQRLPSNIAWVSDVIPCNLWIIR"
BASE COUNT          868 a         1102 c         1078 g          940 t
ORIGIN      
        1 cgatggcgca aaacagccgc gccagcgccg tcgccaaaca acacgcacgt attgcgatcg
       61 gtccagttag tgattgaggt cagcttatcc gcaccgatca cgagaacggt ctcgtatgtg
      121 tgcgatgtga tgaattgctg cgcaatttcc aacccgaaaa taaaacccgc gcacgctgcg
      181 gaaatgtcga ggcaggcagc gttcttcgct ccgatctttt tctggacgaa gcaggctgtg
      241 gcggggaaaa gcatgtcggg tgtggcagtc gccacaagaa tgagatcgat ttccttgacc
      301 gaaatctttg attgctcaat ggcgttcaac gctgctttcg ccgccatgtc gctcgtattt
      361 tcgtcctttg cggccatgcg gcgttcctta atgccggtgc gagtggtgat ccactcatcg
      421 ctagtgtcta ccatgcgtga gagatcctcg ttagtcagaa ctttctcagg cacgtaactt
      481 cccgtgccga cgattgagac tgtccgcagc gtcttatgag agcgcgggtt cgagcggggc
      541 tgtcgtttca tgataccggc gaatttcctc gacgatatgc gggttcacct gctgttcaat
      601 ggactcgccg gcgacgcgaa gtgcgttctt aactgccagc ggcgtgcttg cgccgtgcgc
      661 gattatgcaa atgccattta ccccgagaag cggactgccg ccgtactctt cataattcgt
      721 cttctcctta atcgttccaa tggcattcct cgcgagaaat gcgccgactt ttcgcatccg
      781 tgtgcgcatg agctcgtgct tgagccattg aaacatcgct actgcgatcg attcgcacgt
      841 tttcaagata acgttgccaa cgaatccgtc gcacacgaca acttcaaccg gatcttcaaa
      901 gagatggcgg ccttctatgt tgccaatgaa gttaagcgaa cttggtttca gcatcttgaa
      961 tacttccttg gtcagttcgg tgcccttaac atcctcgtcg ccgagcgaga ctaagccaac
     1021 ggtcggattc ttgtaatgca gaacatgccg tgaataaacc gagcccataa acgcatattg
     1081 aagaagatgt tctgggcgcg catcgatatt cgcgccagcg tcgatcaaaa cgaagacatt
     1141 cttctcggtc ggaagcacgg ccgcaattcc cggccgatcg attccaggca atgttcgaag
     1201 cttaatcgtg ctcgcggcaa cggctgcgcc tgtgtgtccg gcgcttacta ctgcgtccgc
     1261 atcaccgcgc ttaatgagat cgacagcgcg gctgattgag gaatctttct ttcgccgaac
     1321 ggcggtccag gcgcgatcgc tcatatccac gacctgggtg gaatgcacaa tctcgatccg
     1381 tgaatcgttg cactggtgtt tgcgcaactc gttttcgacc ttggcagagt ctcccaccag
     1441 ataaagcttg ttgatctgtt tgtaatcgcg cagcgccata acggcgccgg caacgaggtt
     1501 aggcgggcca aagtcaccgc ccatcgcatc gagggcgatc ttcatcagag ccaaactttg
     1561 cgaggtaaaa cgattgattg caaagcgaaa tttgtagccg cttcgctgcc cgaagcgtag
     1621 ctggagcata cgtcgcccag aggggacggc tacagtttac ttgcctttca acgtcaggac
     1681 ctgtcgcccg cggtaatacc cgcacgatgg gcaggcgatg tgcgatggca cgctactccc
     1741 gcactgcgga catttgttaa gctgcgacgt gtgccagcgg tttgccgctt tccgcgtgcg
     1801 caatcgcatc tttgacgttt tgcgttttgg gactcccatg gcaggcgcgt accaaagcat
     1861 cattcatcgg aattacaacc agcgcctgcg tgattcgtta aaccgttaaa gcggtaaatc
     1921 ggggcgcttc aacgcttcaa cgcttcaacg tttgagcttc agcttatcca gcgcgctcca
     1981 atccgattcc cggttcgcat cctgctcttc ggttttcagc tgtttggcct tacaaacccg
     2041 atcaccgtct ctgtcgcagt ggggatgcgc cggcaagttc agcaaaaggt cctcgcgcac
     2101 ggagggcgtc aggtcaaccg tctccggtcc gtgtagcgcc gtgtgcacgg cgaacgcggg
     2161 cactcgaatc tcatgcacaa acttttccag acacgatacg caacgcagtt ccaccggttg
     2221 ggacaacgag ccgttagccc acagcccgcc gtcagcaacg ccgacgtcga tgtcgtaatg
     2281 cagagggcca gcgcacagaa tctcctccga tgccaactca tggatgggac aatcttcttc
     2341 cccgctcaga tgcagacctt ggggcgggat ttggttcaga tgtactttca tgagctaacc
     2401 ctccaaattt cattggctaa atttcccact cagcgctttg gccacacaat ccggaacaaa
     2461 agttgaaata tttcccccga gcctggcgat ttcctttacg atgcgtgagc tgagataagt
     2521 atattcctcc ttcggcatta gaaatatcgt ttctactgcg gcattcagat ttcgattcat
     2581 gagcgccatt tgaaattcaa attcaaaatc cgaaactgcg cgtaaacctc taatcacggc
     2641 tcccgcgttt tgagcccggg cgaattcgac caataatccg ctaaactcgg caatccggac
     2701 gttctcgatt tggccggcgg tctctcgcag caaatccagg cgttgctcga gcgagaaaag
     2761 cggttgcttc tcgtcattgt gggcgactgc cacgacgacc tcgtcgaata attttcgcgc
     2821 gcgctcgatc acatccaggt gcccgttggt caccggatcg aagctgccgg ggtaaattgc
     2881 ccgtcgcatt tgcgaaaatt cgcagaggaa tcggaaaatg aaaagctgaa tggcgactga
     2941 ccggtctggg cggcgaagcc atttgtcata ttcgccgcgg ttgcttaaac ctgatgaaac
     3001 atcacattgc cattaacttc gatgcgcgat tcatcgcctt acaagaccat tgctgtggcg
     3061 acaacgtttt cgccccgatt caagcacgtc cttgctgaag cgaaacggat ccgggaccgg
     3121 tttggggccg aacttcatct gatccacgtg ggcaaccgag atcaggaaac gccgaagaaa
     3181 tttagtgacg tgctcgcgga actggacctt ccagctgatt cgccgatcca ttatgagaag
     3241 ggcgaaccag cggaggctat tctggccgcg ctcgcgaggg aaaatatcga tgtgctcgtg
     3301 gccggtgcgc tggagaagga gatcgtgtta catccgtttc tgggcaatgt cgcacgtcgc
     3361 ctggtgcgag aggcgaactg ttcagtgatg ctattcacgc atccgcaaaa aaaaccggaa
     3421 ccgctgcgca ggatcgtgtt cattgcggac cactcacagc agggattggt ggcgttgaaa
     3481 acgacgctga tgctggcgga agcagaatca tgcgagcgac tgtacgtgat tggaatcatt
     3541 actgcgtttg atgacgcaag ggcttcgatt gccggcgatg ccaccgcggg tcccccgcac
     3601 cagccgaacc aaggcgacga agacccgctt gaagagtttg ttttgtcagc tggcgcgact
     3661 gaagttccaa ttgagacgcg cttcattaga ggcgctacgg gactagctgc atcggatttt
     3721 gtgcgctcgg tggaggccga cttgcttgtc gtgccgtttc cgaaaagtcg cgagacggtt
     3781 cagcgactgc cgagcaatat tgcctgggtt agcgatgtga ttccgtgtaa tctctggatc
     3841 atccgctaga ggtggatcgc gttctctgaa cgcggggtag tatcagccgt tgacggcgta
     3901 gctatttgcc atcgtcttcg gagaagccga tccatcttgt gatgagtgac gcgcctgaat
     3961 ttcaaccgta cggtttgccg cacctgac
//
LOCUS       DATDAJ010000265         5179 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1500691, whole genome shotgun sequence.
ACCESSION   DATDAJ010000265 DATDAJ010000000
VERSION     DATDAJ010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5179)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5179
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1500691"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1086
                     /locus_tag="VIS53_06625"
     CDS             <1..1086
                     /locus_tag="VIS53_06625"
                     /inference="COORDINATES: protein motif:HMM:NF013406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HEY5767491.1"
                     /translation="LWMWLTGVFGIATKYSEAVLSVKYRIKTERGRMAGGPMYVLERG
                     MKQKWLGVIFAILTTISAFGIGNMVQANSISTMVNETFHIAPWITGVVMAVLTAFVIL
                     GGIKSIAKVCEFLVPFMAIFYVGGCLILLIMNASGIPATIQLIFESAFSGHAMIGGFA
                     GATMKEAIRYGVARGLFSNESGLGSAPIVAAAAQTKNPVRQALVSSTGTFWDTVVVCA
                     MTGLVLVNSGEWAKGLKGAALTKAAFSEFHIVGPIILTMGLLTFVFSTILGWSYYGEK
                     AAEYLLGTKVIKPYRWLWVIAVVVGSVLSLSTVWSLADVTNGLMAIPNLISLIALNGV
                     IVAETRRYLWNNNLDEAAPPATELADA"
     gene            complement(1072..1743)
                     /locus_tag="VIS53_06630"
     CDS             complement(1072..1743)
                     /locus_tag="VIS53_06630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767492.1"
                     /translation="MNTWVEAPPRRKGLGCFARGCLILLIFAIVLAIAGFAGLYWGLH
                     RNSALFYGSYWLAKTRSFAEATTPVPEFNASDQQIQLVQERWQDFEQKTRAGQPAEIE
                     LSTDDINALIATSENVRGKVFVSIDGNLLRLQVSVPIGGFLGRPGYYFNGDVIIELKG
                     AQSLDNPQFSRITINGEQVPTDFLSWTYRSRQLREYLTDQGNAYEIGTMEIRDGKVIL
                     RSRIG"
     gene            complement(1833..2357)
                     /locus_tag="VIS53_06635"
     CDS             complement(1833..2357)
                     /locus_tag="VIS53_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEY5767493.1"
                     /translation="MANDEFPKNEVETLWAPWRVQYFEKEPRDRDFLATAGRASDDAE
                     HLVITRRKNGFLMMNRYPYTVGHLMVVPYRKVAELSALGENEIVELWNLVVHAQALLR
                     AAVKAQGFNIGLNLGECAGAGVPDHLHIHIVPRWTGDTNFMPIIGGGRVLSDGLRGLY
                     DKLMEAQTRMASPR"
     gene            2546..3031
                     /locus_tag="VIS53_06640"
     CDS             2546..3031
                     /locus_tag="VIS53_06640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767494.1"
                     /translation="MRCIVFLVVAAHALALTCRLFAGDKPDSGDEFAKVKSEYADVLA
                     LEGTAKGEILAIARILRAKPRIAVDQTAASGEYCFNSGQGTMVHFATQLEGTAEDVVY
                     EFDASGLIAAGLDTSRLQQLPERGRMTPGVWYFLPKGQQDPHHARAMSAPTIAIAIDV
                     K"
     gene            3530..3889
                     /locus_tag="VIS53_06645"
     CDS             3530..3889
                     /locus_tag="VIS53_06645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767495.1"
                     /translation="MVISSSGVAERDCVFITPDKPNKAIWYVTRHEPENWFVEMLKVV
                     PGVTACRLEIQLTPNGDECFADVTYSHTSIGAAGDEFVAAFTADFYQKFMQDWEQALN
                     HFLKTESGLKHDMPHAF"
     gene            complement(3934..5067)
                     /locus_tag="VIS53_06650"
     CDS             complement(3934..5067)
                     /locus_tag="VIS53_06650"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY5767496.1"
                     /translation="MNGSRIFAILIGALLASLPVRGQENVEAIVAQNLRPILPGNGKP
                     GGVAVAVRINGETRFFNYGFANDARKERVTPDSIFNLGSVGKVFATTILAEAVKRGEL
                     SLDDPVAKYVTELERGGDIRQVTLGQLASHTSGLPRVPQQYEHWHRGGYTWPDFVRFL
                     NSWKAGPNHEPGKQYLYSNAAMVLLRVALERRFNTRFAALMHERITGPLGMSSTALPV
                     PRDLVGRTVQGYGPGGSPIGQPGEEQGTFKWPSAGQIYSSSRDMAVFLAANIGDLAGH
                     GPIENAMAFAQQPVFTVSPRLSLGLAWQNVSGGNLLIRDKNGGLNNTSTYIGFAPQPK
                     LGIVILVNRGKQQPTTNGRQILHALAQEKSEPSNEGEPEPDAD"
BASE COUNT         1163 a         1447 c         1382 g         1187 t
ORIGIN      
        1 ctctggatgt ggctaaccgg cgtgttcggc attgccacca aatattccga agcagttctg
       61 tcggtgaaat accgcatcaa aactgaaagg ggacggatgg ccggaggtcc gatgtatgtc
      121 ctcgagcgag ggatgaaaca gaaatggctc ggagtcatct tcgccattct gacaacgatt
      181 tccgcattcg gcatcgggaa catggtccag gcaaactcca tttcgacgat ggtaaacgaa
      241 acattccaca tcgctccatg gattacaggc gtggtgatgg cggtgctcac agctttcgtg
      301 atcctgggtg gaatcaagtc gatagcgaaa gtctgcgaat tcctggtacc gttcatggca
      361 attttctacg tcggcggctg ccttattctc ctgataatga atgcttcggg aatccccgcg
      421 acgatacagc tcatcttcga aagcgccttc agcggtcacg caatgattgg aggctttgcg
      481 ggcgcaacga tgaaagaagc gatccgctac ggtgtggcac gcggcctttt ctcaaatgaa
      541 tccggcctcg gcagcgcacc aattgttgcc gccgcggcac agacaaaaaa ccccgtacgc
      601 caggcgctcg tttcttccac cggaacattc tgggacacgg tcgttgtctg cgcgatgact
      661 ggactggtat tggtcaactc cggcgaatgg gctaaaggcc tgaaaggcgc ggctctcaca
      721 aaggccgcgt tctccgaatt ccacatcgtg ggcccaatca ttctcacaat gggtttatta
      781 acgtttgtgt tttccacgat tcttggatgg tcgtactacg gcgaaaaagc cgccgaatat
      841 cttctcggaa cgaaagtgat caaaccctat cgctggctct gggtaatcgc agtagtggtc
      901 ggctcagttc tctcgctttc gactgtctgg tcgttagccg acgtcacaaa cggtctgatg
      961 gcaattccaa atctcatctc gctcatcgcg ctcaatggcg tcatcgttgc tgaaacccga
     1021 cgctatttgt ggaacaataa tctggacgaa gcagcgccac ccgccacaga actagccgat
     1081 gcgtgagcgc aggattactt tgccatcgcg tatctccatc gtaccgatct catacgcgtt
     1141 cccctgatcg gtgagatact cgcgcaattg ccgggaacga tacgtccaac ttaagaaatc
     1201 agtcggcacc tgctcgccgt tgatggtaat gcggctgaac tgcgggttgt ccagtgactg
     1261 cgcgcccttt agttcgatga tcacatcgcc attaaaataa tatccgggcc tgccgagaaa
     1321 tcctccgatc ggcacactca cctgcaagcg gagtagattt ccgtcgatcg agacaaatac
     1381 tttcccgcgg acgttctcgc ttgtagcgat cagcgcattg atgtcatccg tgctcaactc
     1441 aatctccgct ggttggcctg cgcgcgtttt ctgttcgaaa tcctgccagc gttcctggac
     1501 aagttgaatc tgttggtcgg aagcgttgaa ttcaggaacg ggcgttgtcg cttccgcgaa
     1561 cgagcgtgtt ttggccagcc aataactgcc gtagaacaat gccgagttac ggtgaagacc
     1621 ccaatacaac ccggcaaaac cagcaatcgc cagcacgatc gcaaatatca acagaatcag
     1681 gcagccccgt gcgaaacagc ccagaccttt tctccgcggg ggcgcttcaa cccaggtgtt
     1741 cataactgta gggcgtctgt gtcagacgcc gtctgtcatt tctaagacat gtgattcgtt
     1801 acatcggatt tactcttcaa cgctttaacg atttaacgag gcgaagccat cctcgtctgc
     1861 gcttccatca atttgtcgta caagccgcgc aaaccgtccg agagcacgcg cccgccgccg
     1921 atgatcggca tgaagttcgt gtcgccggtc cagcgcggca cgatgtggat gtgcaagtga
     1981 tcgggcacac ccgcgcccgc gcactcgccg agattcagac cgatgttaaa tccctgtgcc
     2041 tttaccgcgg cgcgcaaaag cgcttgcgcg tggactacca agttccagag ctcaacgatc
     2101 tcattctcgc cgagcgctga aagctccgcg actttccgat acggcacgac catcaggtgt
     2161 ccaaccgtgt aaggataccg gttcatcatc aggaacccat ttttccggcg tgtgattacc
     2221 agatgctcgg cgtcatcgct cgcgcgcccc gcagttgcca gaaaatcgcg gtcgcgcggt
     2281 tccttctcga aatattgcac gcgccacggt gcccagagcg tttctacttc gttctttgga
     2341 aattcgtcgt tggccatgcc tatcgcccac tgaaactaaa atcctgcgct ccaaagtcga
     2401 gcgagcattt ctgtttggct caatcctgtc attccgagcg aagtcgagga atctctggat
     2461 aattactttt gtcggcgtga agttagacga aagaattccg gcgaaatata attggccagc
     2521 tcaaacattc taagaaggta tcattatgcg ctgtatcgtt tttctagttg ttgctgcaca
     2581 cgcgttagct ctgacctgtc gtctcttcgc cggcgacaaa ccggactcgg gagacgaatt
     2641 cgccaaagtg aaaagcgaat acgccgacgt cctggccctt gagggcaccg cgaaaggcga
     2701 gatcctggcc atcgctagaa ttcttcgtgc gaaacccagg atcgcggtcg atcagacggc
     2761 ggcgagtggc gaatactgct tcaacagcgg ccaaggcacg atggttcact ttgccacgca
     2821 attggaaggc acggctgaag acgttgttta cgagttcgac gcgtccggcc tgatcgcggc
     2881 aggcttggat acgtcgcgat tgcagcagtt gcctgaacga ggccgaatga cccctggcgt
     2941 gtggtatttc cttccaaaag gccagcagga tccacatcac gcccgcgcga tgtctgcgcc
     3001 cacgatagcc atagcgattg atgtaaaatg aattcgctaa caggctgctt tgatgcccac
     3061 aaaaccgaat tgatattttc gttttgtcca gagtgccgtt gatcttgtgt ctcgttaaac
     3121 ctcacatcgt ggacgctgac tctatagccg cagtaggaat cgatgcggaa gagcgcctct
     3181 ttatgtcacc gatgtcgcgc agaaaaaagc gcagaagcag ctggcgaaac ttttcccaat
     3241 gctaaacaca tcagcaaaac gaatagcggc cacgaaatac acaagcagca gcgcaactgg
     3301 tgatcaatgc aaccgcgagg tcgtcgaggc ggttcgtaat ggatccgcgc cagcggattt
     3361 tcaaggtgcc aggtagcgca gctttttgtg gccaggcagc atgcgagtca tcaaatcaaa
     3421 tcgggcaaca cacacctaca ggcaacgact gttcgcggcc ccagcccgag tgtttccgct
     3481 tttgtgtcca gttcgtgaaa ccgaatgggc tgagggttgg ctaccggact tggtcatcag
     3541 ttcctccggc gttgcagaac gcgattgcgt tttcatcacg ccggacaaac ccaacaaggc
     3601 aatctggtac gtcacacgtc acgaaccgga gaactggttt gttgaaatgt tgaaggttgt
     3661 gcctggggtc accgcttgtc gtttggaaat tcaacttacg ccgaacgggg acgaatgttt
     3721 tgcggacgtt acttacagcc acacaagcat cggggctgcc ggcgacgagt tcgttgctgc
     3781 attcacagct gatttctatc agaaattcat gcaggactgg gaacaagcgt tgaaccattt
     3841 tctcaagaca gaatctgggc ttaaacatga catgccgcat gccttctaaa gaatcgccgt
     3901 ccgattactc accagaacca cagtgaagaa gcgtcagtcg gcatccggtt ccggttcgcc
     3961 ttcattcgat ggctctgatt tttcctgcgc tagcgcgtgc aagatttgcc ggccgttcgt
     4021 agtgggctgc tgtttgccgc ggttcacgag aataacaatg cctagcttgg gctgcggagc
     4081 gaacccgatg taggtcgagg tgttgttaag gccgccattc ttgtcgcgga tcagaaggtt
     4141 cccgccactg acgttctgcc aggcaagacc caggctgaga cgcgggctca ctgtgaatac
     4201 cggttgctga gcgaaggcca tcgcattttc tattgggccg tggccggcaa ggtcgccgat
     4261 gttcgcggcc aggaacacgg ccatgtcgcg cgatgaggaa tagatttgac cggcgctagg
     4321 ccacttgaaa gtcccctgtt cttcacccgg ctgaccgatc gggctgcccc cggggccgta
     4381 cccttgcacg gtccgtccaa ctaaatcgcg cggcacgggc agcgcagtcg agctcattcc
     4441 gagtgggccc gtgattcgtt cgtgcattaa tgctgcaaac cgagtgttga agcggcgttc
     4501 gagcgccaca cgcaacaaga ccatggcagc attggagtag agatattgtt tcccgggctc
     4561 atggttcgga cctgctttcc atgaattgag aaagcggacg aaatcgggcc atgtgtatcc
     4621 gcctcggtgc caatgctcgt attgctgcgg cacacgcggc aatccggagg tgtggctggc
     4681 aagctgtccc aatgttactt gacgaatatc accgccgcgc tccaactccg tcacatattt
     4741 ggctactgga tcgtccaggc tgagctcgcc gcgcttgacc gcttccgcca ggatcgtggt
     4801 cgcaaacacc ttgcctaccg agccgaggtt gaagatcgaa tcgggcgtga ctcgttcctt
     4861 cctcgcgtca ttagcgaaac cgtaattaaa gaaacgagtc tcaccattta tgcggactgc
     4921 gaccgcaacg ccgcctggct tcccgtttcc cggcaaaatt ggtcgaagat tttgcgcgac
     4981 aattgcttca acgttctcct ggccgcgcac cggcaggcta gcaagcaaag ctccgatcag
     5041 gattgcaaaa attctcgacc cattcatcgc gcgattcttt actgctcagc ggatgttggc
     5101 aatgctgttg cacgatggcg ccggaaaatt gttctgctgg aaccgttgcg ttcacgacca
     5161 acacaacggt actgcaaag
//
LOCUS       DATDAJ010000266         4915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1505956, whole genome shotgun sequence.
ACCESSION   DATDAJ010000266 DATDAJ010000000
VERSION     DATDAJ010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1505956"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1303
                     /locus_tag="VIS53_06655"
     CDS             <1..1303
                     /locus_tag="VIS53_06655"
                     /inference="COORDINATES: protein motif:HMM:NF024907.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FG-GAP-like repeat-containing protein"
                     /protein_id="HEY5767497.1"
                     /translation="TAVNLGGDIVFAEPINPEGLVGQVFLAVDRSGTSTNDNVYMLAS
                     VQPSGFNNGSDVMFVRSTNGGITFSAPRRINDDPVNHAKWHWFGTLSVAPGGRIDVVW
                     YDTRNAPNNVTSQLFYSFSIDGGNTWSPNVAVSNPFNPFLGYPHQSKIGDYITVVSDD
                     DSANVAYAATFNGEEDIYYVRIRPALPPTDFNADARPDLLLFNATTRQTAVWYMNNNV
                     RIGSASGPTPPGGWTVASVADFNGDNHPDYLLFNTATRVTGMWYMNTNVRIGTAFGPT
                     LPAGWTVVALGDFNSDGYPDYVLFNANTGGTIVWYMRNNVRIGSATGPTLPAGRSVAG
                     VADFNGDTHPDYLLFNAATRGTVIWYMSGATRTGSRNGPTIAAGFEVAGLADFDGNGR
                     PDYLLYNSSTRQTAVWYLNNYQLIGNAAGPTIWAGWNIVAP"
     gene            1588..1911
                     /locus_tag="VIS53_06660"
     CDS             1588..1911
                     /locus_tag="VIS53_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767498.1"
                     /translation="METSFQATGSVLGTNIKDTGTYTTIFRPDGTQYGEGQGIMITKD
                     GKTATWTGHGVGAMKKDGTATYRGALYFQTMPPKWSRLNKVAVLFEYAVDAEGNTHSE
                     YWEWK"
     gene            complement(2200..4647)
                     /gene="lon"
                     /locus_tag="VIS53_06665"
     CDS             complement(2200..4647)
                     /gene="lon"
                     /locus_tag="VIS53_06665"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: protein motif:HMM:TIGR00763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEY5767499.1"
                     /translation="MSTEKLNALQPSADSKPTGQGTIALGVPESRTPRIPEELSILPV
                     RSFVVFPGTVLPLNVQRAASLKLLDDTLPRTKVIGLLTQRDETKEDPSTQDLYSLGTA
                     ALVLKLVRQSEDNVLVIVQGLRRFSLRKIIATDPFLRAEVDLPESIVPSPSKEWEATF
                     RNLRDSASRLFELTPDAPEQARMMIMNIENPEQLADFLAPNLNIDVAQKQALLEELDV
                     EKRVRAVQQHTSAQLEIAQIQQRLQKDVASQFSDAQRRAYLRSQLKAIQHELGETEGG
                     SEEQAEQLRARLQEANPPEEVMKQAERELKRLDFIPPASPEFSVIVSYIEIIGDLPWN
                     KFSNDNLDLEQAQQVLDRDHYDLEKVKKRLIEYLAVRKLNPQGHGAILCFLGPPGVGK
                     TSLGQSIADALGRKFVRISLGGMRDEAEIRGHRRTYIGSMPGRIIQELRRCGTRNPVF
                     MLDEIDKIGADFRGDPASALLEVLDPRQNNAFVDRYLDVPFDLSQIIFIGTANYIEGI
                     PEPLRDRIEVISLPGYTEREKLEIAKRYLVPRQLEENGLKPEQCEFQEDALRRIINDY
                     THEAGVRELERQIGAVCRGIAAQVARGKIDHATVTPEKVVEMLGPAKYVRETKLKTSK
                     PGVVTGLAYTPAGGEVLHIEATRYPGKGNITLTGQIGNVMKESVQAALSLLRSRDGQL
                     GVKAEDFRKMDVHVHVPAGAVPKDGPSAGIAMFTALASLFSNRQVRSDVAMTGEITLR
                     GLVLPIGGLKEKSLAAMRAGISTVIIPKLNEKDLVDVPEEAKQKLKFVPVENVDEVLA
                     VALEKNGARPPLDRKSA"
     gene            complement(4644..>4915)
                     /locus_tag="VIS53_06670"
     CDS             complement(4644..>4915)
                     /locus_tag="VIS53_06670"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY5767500.1"
                     /translation="IRICVDLAGVDRSLIDLSVEPRRLVIRGTRELPEPTGDEGSAQQ
                     LLAMEIDYGPFEREITFPVDVEIDKAHAEQRNGLLWISLPVRKES"
BASE COUNT         1057 a         1424 c         1333 g         1101 t
ORIGIN      
        1 cacggcggtg aaccttggcg gcgacatcgt tttcgccgag ccgatcaatc cggaaggatt
       61 agtgggccag gtttttcttg ccgtcgatcg ctcgggcacg agcaccaacg acaatgtcta
      121 tatgctcgcg agtgttcagc catccggttt taataatggc agcgacgtca tgttcgtgcg
      181 cagcaccaat ggcggcatca cgttcagcgc gccgcgccgg atcaatgacg acccagtgaa
      241 ccacgcaaaa tggcactggt tcggcacgct gtcggtcgcg cccggcggtc gaatcgatgt
      301 cgtctggtac gacacgcgta acgctccgaa caacgtcact tcgcagctct tttattcttt
      361 cagcatcgat ggcggaaaca cctggtcgcc aaatgtcgcg gtcagcaacc cgtttaaccc
      421 attcctcggt tatccacatc agtcaaagat cggcgattac atcacagtcg tttcggacga
      481 cgacagcgcc aacgttgcat atgcagccac attcaatggc gaggaagaca tttattatgt
      541 ccgcatccgt ccagcactac cgcctacgga tttcaatgct gacgcgaggc ccgatctcct
      601 tcttttcaac gcaaccacgc gccagacggc agtttggtat atgaacaaca atgttcggat
      661 cggtagtgct agcggtccga ctccgcccgg aggctggacc gtggcgagcg tggcggattt
      721 taatggcgac aatcatccgg attacctgct cttcaacacg gcgacccgcg tgacagggat
      781 gtggtacatg aataccaacg ttcgcatcgg caccgctttt ggtccgactc ttcctgccgg
      841 ttggacggtc gtggcgctgg gagatttcaa cagcgatggg tatcccgatt atgtgctctt
      901 caatgcgaac actggtggaa caattgtttg gtacatgcgc aacaacgttc gcatcggctc
      961 agcaaccggc ccgactcttc cagccgggcg gagcgtggct ggagtggccg atttcaatgg
     1021 cgatacgcat cccgattatc ttctgttcaa tgcagccacg cgcgggacag tgatctggta
     1081 tatgtctgga gcgacccgca ccggcagcag aaatggacca acaattgcgg cgggctttga
     1141 ggttgcggga ctagccgatt tcgatggcaa tggcagaccc gactatctgc tctacaattc
     1201 cagcacacgc caaacagcag tttggtacct caacaattat cagctcattg gcaacgccgc
     1261 cggtccgacc atctgggccg gctggaatat cgttgcgcct tgagctttct tgtcgcttcc
     1321 ggggagcgcg tgcgcctcgc gcgctgcgat tggcgccctc gccaatcgcc gggagtacgg
     1381 gaacttggaa cacgcaccac attcccaccg ttgaatttag catcgtcaca gtcaaacttt
     1441 tctcgtatgc tcagcccagc cgaattcagt ggattctaac aaccaaacct taacgaaagg
     1501 acatttatgc taggcgagaa gattggtgag atatcaggca aagttacaat gcaacgcgtt
     1561 ttgccgaatc tgggcggaga cccgaagatg gaaacatctt ttcaggcaac cggttcagtg
     1621 ctgggcacaa acataaaaga cacaggcacg tacacgacca ttttccgtcc ggacggaaca
     1681 caatacggcg aaggtcaggg catcatgata acgaaggacg gcaaaacggc cacctggacc
     1741 ggccatggcg tcggcgcaat gaaaaaagat ggaaccgcga cttatcgcgg cgccctttat
     1801 ttccaaacca tgccaccaaa atggtcacgt cttaacaagg tggcagtgtt attcgagtac
     1861 gcagtagacg cagagggcaa tacacactcc gaatattggg aatggaagta gtgcgtgagc
     1921 cacatttggc aagctggaca ccgtgggttg ccgcgttaga cagcggaggc gaccgaagcc
     1981 ctgatacacg agctgattga actgcgagac gcactgagcg agatcaagtc caacactgaa
     2041 gttggtctcc gtgggttgaa gatttatgag aagccatcca aaaaggctta accacgcgat
     2101 gcccctaaca ggctccgtcc gtcacgacct gtgctacaga cccgcagacc taccagcacg
     2161 ggccgcggca gagtccgccc gtagcggatc tttttctcgt taggccgatt tccggtctaa
     2221 aggaggccgc gcaccgtttt tctccagcgc tacggccaaa acttcatcta cgttttccac
     2281 cgggacgaat ttgagtttct gtttcgcttc ctcggggacg tcgaccagat ctttttcgtt
     2341 gagcttggga atgatgacag tggaaattcc ggcgcgcatc gccgccagac ttttttcttt
     2401 caacccgccg atcggcagaa cgagtccgcg caaagtgatc tcgccagtca tcgcgacatc
     2461 ggaacggacc tgtctgttgc tgaagagcga agcaagcgca gtaaacatgg cgatgccggc
     2521 tgatggtccg tcttttggca ccgcgcccgc ggggacgtgc acgtggacgt ccatttttcg
     2581 aaaatcttcg gctttgacgc ccagttgacc atcccggctg cgaaggagac tgagtgctgc
     2641 ctgcaccgat tctttcatca cgttcccaat ctgccctgta agcgtgatat tccctttgcc
     2701 cggataacgc gtggcttcga tatgcaatac ttcgccgccg gccggcgtgt aagccaatcc
     2761 agtaaccacg ccgggtttac tggtcttgag ctttgtttca cgaacgtatt tggccgggcc
     2821 aagcatttcc accaccttct ccggcgtgac cgttgcgtga tcgattttgc cgcgcgcaac
     2881 ctgcgccgca atgccccggc acacagctcc gatctggcgc tcgagctcgc gaacgccggc
     2941 ctcatgcgtg taatcgttga tgatccggcg cagcgcgtcc tcctggaatt cacattgctc
     3001 gggtttaagc ccgttctcct ccagttgtcg cggcacaaga taacgcttcg caatctcgag
     3061 tttctcgcgc tcggtataac cggggagtga gatcacttcg atccggtcgc gcaacggttc
     3121 cggtatgcct tcaatgtaat ttgccgtgcc gatgaaaatt atctgcgaca gatcaaacgg
     3181 cacatccagg taacgatcga caaacgcgtt gttttgccgc ggatcgagca cttcgagcaa
     3241 tgcgctggca ggatcgccgc gaaaatccgc accgattttg tcgatctcat cgagcataaa
     3301 gacaggattg cgggtgccgc agcggcgcag ctcttggatg atccgtcccg gcatcgagcc
     3361 gatatacgtg cgacgatgac cgcgaatctc cgcttcatcg cgcattccac cgagactgat
     3421 ccgcacaaat ttgcggccca gcgcgtcggc gatcgattgc cccagactgg ttttgcctac
     3481 gccgggcggc ccgagaaaac agaggatcgc gccgtgtccc tgcggattga gttttcgtac
     3541 cgcgagatat tcgatgagtc gcttcttaac tttttccaga tcgtagtgat cgcgatcaag
     3601 gacttgctgc gcctgctcga gatcgagatt gtcgttgcta aacttattcc atggcaggtc
     3661 gccaataatt tcgatgtaac tcacgatcac tgagaactcg ggacttgccg gtggaatgaa
     3721 atccagccgc ttcaattcgc gctcggcctg cttcatgact tcttccggcg gattcgcttc
     3781 ctgaaggcgc gcgcgcagct gttccgcttg ttcctcactg ccgccctccg tctcaccgag
     3841 ctcatgttga atcgctttaa gctgggaccg cagatacgcg cgccgctgtg catcggaaaa
     3901 ttgtgaagcg acatcttttt gcagtcgctg ttggatctga gcgatctcga gctgcgccga
     3961 agtgtgttgc tgcacggcac gcacccgttt ttcgacgtcg agttcttcta gcaacgcctg
     4021 cttttgcgcg acatctatat tgaggttcgg cgcgagaaaa tcggcgagct gctccggatt
     4081 ctcgatgttc atgatcatca tgcgcgcctg ttccggcgcg tcgggcgtaa gctcgaacaa
     4141 acgcgaagcc gaatcgcgca aattccggaa cgtggcttcc cattccttgc tcggcgacgg
     4201 cacgatcgat tccggcaaat cgacttcggc gcgcagaaac ggatcggtcg cgatgatttt
     4261 gcgcagcgaa aaacggcgca gtccctgcac aatcacgagc acgttgtcct ctgactgtct
     4321 aacaagtttg agcaccagcg cggccgtgcc gagagagtac agatcttgag tcgacgggtc
     4381 ttctttcgtc tcatcgcgct gcgtcagtaa cccgatcacc ttcgtgcgcg gcaaggtgtc
     4441 atcgagcagt ttgagcgatg ccgcccgctg aacgttcagc gggagaactg tgcccggaaa
     4501 aacgacaaaa ctgcgcactg gcaaaatcga caactcctcg ggaattcgcg gcgtgcggct
     4561 ttcgggcacg ccgagcgcga tggttccctg gcctgttggc ttggaatccg cactcggttg
     4621 caacgcattg agcttttctg tgctcatgat tcttttctta ctggcaacga aatccaaagt
     4681 aatccgttac gctgctcggc gtgtgctttg tcgatttcca cgtcaacggg aaaagtgatc
     4741 tcgcgttcaa acggcccgta atcgatctcc atcgcgagta attgctgggc ggatccctcg
     4801 tcgccagtcg gctccggcag ctcacgcgtg ccgcgaatca ccaggcgccg cggttcgacg
     4861 ctcagatcga tcagcgaacg atcgactccc gcgagatcaa cacagattcg aatac
//
LOCUS       DATDAJ010000267         2686 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1513091, whole genome shotgun sequence.
ACCESSION   DATDAJ010000267 DATDAJ010000000
VERSION     DATDAJ010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513091"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2320)
                     /locus_tag="VIS53_06675"
     CDS             complement(<1..2320)
                     /locus_tag="VIS53_06675"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY5767501.1"
                     /translation="MVRRIFRSLSLALIIGLLWLAIGASAHAEIPRRLLILYGANTLI
                     PGDVIVERMMREIVAAAGPQPIDFDAESFDPPSLGNPNYESALARFLRQKYRDRKFDI
                     IMTVQTPALDFVLKHRTQLWPDSAVVFLGSAESAVRQRSLGRRVTGVVGRSDFAGTLR
                     LAFRLQPNAGHVVVVSGVTETDQAWIPLVQSALRPYEEKVKVTYLTHHSLPEILKTVS
                     TLPRDTVVLYTSMFQDAEGKTTIPRDVMAQLANVSAAPVYGFDENFMGLGIVGGAMTN
                     FDRNAQQVGKLIARILAGENPDEIAVEFPRSTPLTVDWRQLKHWGLNEQLLSPDTIVL
                     FRQPTLWQEYRWQILGFAVLLLIESLLVIALWLQQRRRKRAELAVERQCLELAHANAS
                     LTVSETKNRAILNAVPDLMFIQTIDGVYVDCQFKDSGDLLLRPENFLGKNMKEVLPND
                     LAEVFLECFKRAGESEEPVIHEYSLLMNEQTRHFEARMIRYQDEQILTMVRDITARKN
                     AEESLRENQTLLKTIMDNCPAIVFLKDPEGRYLYANLQFKILAHLAPEDIVGKTDFDL
                     FPHEQAAAFRAHDLAVLKTGSASQFEEVAAYADGLHTSVVYKFPLFDGGGNVYATGGI
                     VADITERKRIEDTLRESEARFRYMADYVPTIIWINDALGRCTYVNKQWTEFTGTVFEE
                     QLGFGWLASIHPDDREAIKKLAGVAIQNRAPFQFDYRLRRHDGQYRSVIDTGSPRFGP
                     QGEFFGYIGAVTDITERKRVEDALSESEYRYRN"
BASE COUNT          598 a          759 c          726 g          603 t
ORIGIN      
        1 cgttgcgata cctgtattca ctctcactca gcgcgtcctc caccctcttt cgctcggtga
       61 tgtcggttac cgcgccgata tagccgaaga attccccttg aggaccgaat cgcggcgagc
      121 ccgtgtcgat gaccgaccgg tattgcccgt cgtggcgtcg caatcggtaa tcaaattgga
      181 acggcgcacg gttctgtatc gcaaccccgg cgagcttttt gatcgcttcc cgatcgtccg
      241 ggtggatact cgcgagccag ccgaaaccta gttgttcttc gaaaaccgtt cccgtaaatt
      301 cagtccattg tttgttcacg taggtgcatc gacccagagc atcgttgatc caaattatgg
      361 tgggaacata gtcggccatg tagcggaagc gggcttcgct ttcccgcaag gtgtcctcga
      421 tgcgttttcg ctcggtgata tccgcgacga taccgccggt cgcataaaca tttccgcctc
      481 cgtcgaagag cggaaacttg tagacgacgc tggtatgcag gccgtcagcg taagcggcaa
      541 cttcctcgaa ttgtgacgcc gatccggttt taagcaccgc gagatcatgg gcgcgaaatg
      601 cagcggcttg ctcgtgagga aataagtcaa aatcggtctt tccgacgatg tcttcgggcg
      661 ctaaatgcgc cagtatcttg aactgcaagt tggcatatag ataacggccc tccgggtcct
      721 tgagaaagac gatggcgggg cagttgtcca tgatcgtctt tagcaaagtc tgattttcgc
      781 gcagtgattc ctcggcgttt ttgcgcgcgg taatgtcgcg caccatggtg agaatctgct
      841 cgtcttggta gcgaatcatg cgagcttcaa aatggcgcgt ttgttcattc atcagtaaac
      901 tatattcgtg aatgaccggc tcctccgact cgcccgcgcg tttgaagcat tccaaaaaaa
      961 cctcagcaag gtcattagga agcacttctt tcatgttctt gccgagaaag ttttccggcc
     1021 gcagcaacag gtccccgctg tctttgaact gacagtcgac ataaacaccg tcgatcgttt
     1081 ggataaacat aaggtcgggc acggcattca gaattgcgcg attcttggtt tcgctcaccg
     1141 tcagagacgc gttagcgtgt gccagctcca agcattgtcg ctcgacagct aactcggcgc
     1201 gctttctccg tcgctgctgc agccagagag caatcacgag caaactctcg atcaggagaa
     1261 gaacggcaaa cccaagaatt tgccatcgat actcctgcca gagcgtcggt tgccgaaata
     1321 gcacgatggt atccggcgat aacagctgct cgttcagacc ccaatgtttc aactgccgcc
     1381 aatcgacggt cagaggggtc gaccgcggaa attccacggc tatctcgtca ggattttcac
     1441 ccgcgaggat ccgcgcgatc aactttccta cttgttgagc attgcggtcg aagtttgtca
     1501 tcgccccgcc gacaatcccc aaccccatga agttctcgtc gaacccgtag acgggcgctg
     1561 cggatacgtt ggccaattgg gccatgacgt cgcgcggaat cgtcgttttc ccctcagcgt
     1621 cttggaacat cgacgtgtac aaaacgaccg tgtcccgcgg cagcgtgctt accgtcttga
     1681 gaatttccgg caacgagtga tgggtgagat aggtgacctt tactttctct tcgtacggac
     1741 gcagggcgct ctgcacgagc ggaatccacg cttgatcggt ttccgtgact ccgctcacga
     1801 ctacgacatg gccggcgttc ggttggagac gaaatgccaa cctcaaggtg ccggcaaagt
     1861 cgcttcttcc gactaccccg gtaacgcgcc ggccgagtga gcgctggcgc acagcgctct
     1921 ctgcagagcc caagaacaca acggctgagt ctggccacaa ctgagtccga tgcttgagca
     1981 caaaatcaag cgccggcgtt tgtacggtca tgataatatc gaatttccga tcgcggtatt
     2041 tttgccgaag aaagcgggcc aaggcggact cgtaattcgg attaccgaga ctcggcggat
     2101 caaaggattc cgcgtcaaaa tcgattggct gcggacccgc ggccgcaacg atctcccgca
     2161 tcatgcgctc cacgatgacg tcgcctggaa tgagcgtgtt tgcgccatac aaaatcaaca
     2221 gacggcgagg aatctctgcg tgagcgctcg cgccaatggc gagccaaagc agaccgatga
     2281 tgagagctaa agacaggctt ctgaatattc gtctgaccat ggcttccatc gcaaactccg
     2341 gaacctcggc tggatgtcag aggaaatatc acacttgccc atgacatctc cacccttgag
     2401 tttcgctcgc gcacgtcccg gggaaactga catggggccg gataagccac ctgcgccgcg
     2461 cttcgcggaa tcgaattaag gatccagaaa cttgcgctgc cgtgctgcga actggaagtg
     2521 cggaaaccag gaaactatca gttctcgaac ttggccggac tggacgagtt atcgtgtttg
     2581 agtcgattca ctgaggcctc agcttcgtaa cgaaaggcgc aagggtcatc ggggtgttca
     2641 ctgcattccc gcagtttctt cagggcgtaa agaccgacaa gcgcca
//
LOCUS       DATDAJ010000268         3058 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1513872, whole genome shotgun sequence.
ACCESSION   DATDAJ010000268 DATDAJ010000000
VERSION     DATDAJ010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1513872"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            230..697
                     /gene="sixA"
                     /locus_tag="VIS53_06680"
     CDS             230..697
                     /gene="sixA"
                     /locus_tag="VIS53_06680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0101006 - protein histidine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HEY5767502.1"
                     /translation="MQLYFLRHGEADWPGWTKPDDERPLTDFGKKEARQVAKFLSRLK
                     VKPDLIVTSPLPRALQTAEAAAEQLKAKLCQDEALEPGFGISELSTVLKRHRSKVLML
                     VGHEPDFSSVISALTGGFIKMSKAGVALIDFDPETEKGRLLWLFPPKFARKAK"
     gene            complement(817..1233)
                     /gene="secG"
                     /locus_tag="VIS53_06685"
     CDS             complement(817..1233)
                     /gene="secG"
                     /locus_tag="VIS53_06685"
                     /inference="COORDINATES: protein motif:HMM:TIGR00810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEY5767503.1"
                     /translation="MNLLINVCLVLFVLVAALMILVILMQRPKSEGLGAAFGGGVTEN
                     IFGAQTTNVLVKFTTWLAGIFFALTFALSVLYAHHSVASSAFRRELMKNQPAQTSPAP
                     AKTQSSPGSSPATTPAQASPAVSPAVSAAPAGSPKS"
     gene            complement(1304..2107)
                     /gene="mazG"
                     /locus_tag="VIS53_06690"
     CDS             complement(1304..2107)
                     /gene="mazG"
                     /locus_tag="VIS53_06690"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEY5767504.1"
                     /translation="MPDHRPQITDDFANLCDIVAKLRAPDGCPWDREQTNQSLLPALI
                     EEAYETAEAARAQDDAHFREELGDLLLLVVMHAQIAREIGRFDIEEVIEQVSDKLIRR
                     HPHVFGTSEARDAGAVLKQWEAIKREEKKADSHFLASLPKALPALVRAQKAQSKAARV
                     NFDWTALRDVMAKVEEELDETKEAIRSEQHERIEDEIGDLLFAIVNLARKCKIDAETA
                     LQSATDKFVARFNRLEDELKMRGRKLGEVELAEMDAIWDEIKQTSNAQR"
     gene            complement(2293..2655)
                     /locus_tag="VIS53_06695"
     CDS             complement(2293..2655)
                     /locus_tag="VIS53_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767505.1"
                     /translation="MKKHTHLVTSTLSVAIFALLAPASFAQKGGAMSKAQAIAQQLGL
                     TPQQKEKVLPILASEVPKVQAIKNDNSLPKIQKIQQLKAIHQQTDPQMKTILSPEQYQ
                     KLKTIRQQTIGDAVQGRY"
     gene            complement(2818..>3058)
                     /locus_tag="VIS53_06700"
     CDS             complement(2818..>3058)
                     /locus_tag="VIS53_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767506.1"
                     /translation="VPGLAELGKRKWKREVLYAVGQLKRSFIANYVVLGGGLVHRFDR
                     LPKGIVRGQNENAFLGGIRLWERKRNSRELKWHLL"
BASE COUNT          654 a          810 c          851 g          743 t
ORIGIN      
        1 cgaagaaatt ggatcgactg ccggacgggg tcgaacttgg acacaatcga aacgcttttc
       61 ttggcggcgt tcggctctgg caaaccgacc cgcatacccg cagggcgaag tggcaaattc
      121 tgtgagaaat taagtctgtc atgtcgagcg aactcgatac attcctcgat actacctgta
      181 ggttgtgcta cgggatttct cgactctgtt cggaatgatt atctagaaca tgcaactcta
      241 ttttctcaga cacggtgaag ccgactggcc gggctggacc aagccagatg atgaacggcc
      301 gctcaccgat tttggtaaaa aagaggcgcg gcaggtggcg aagtttctca gccggctgaa
      361 ggtgaagccg gatttaattg taaccagtcc gctgccgcgg gcgttgcaga cggcagaagc
      421 cgcagcggaa cagctcaaag caaagttgtg tcaggacgaa gcgcttgagc cgggatttgg
      481 gattagtgag ttgagcactg tgctcaagcg gcatcgctca aaagttttga tgctagtcgg
      541 ccacgagccg gacttttcca gtgtgatctc cgcgttgacc ggtggtttca tcaagatgtc
      601 caaagccggt gtcgcgctga tcgacttcga tcccgagact gagaagggaa gacttctttg
      661 gctgttcccg ccaaaattcg cgcgcaaagc gaaatagggt tctcgcgatt aattgcgctg
      721 tagccactgg cccgtagccg gttctgcgct cgcttcttcg agaaacggcc agcagggccg
      781 tggctaccgc aaaatattct cgagaagaag ggcgggctat gattttggcg aacccgccgg
      841 tgctgcgctt acggctggag aaacagcggg cgaagcctgt gccggcgtag ttgccggtga
      901 cgaccccggt gacgattgtg ttttcgcagg cgcaggtgag gtttgcgcgg gctggttttt
      961 catcagttca cgacggaagg cgctgctggc tacactgtga tgcgcataga ggactgatag
     1021 cgcaaaagta agcgcgaaaa atattccggc cagccacgta gtgaacttca ccagcacatt
     1081 cgtggtttgc gcgccgaaaa tgttctccgt gacgccgccg ccaaatgctg caccgagacc
     1141 ttcactcttt ggtcgctgca tcaggatgac aagaatcatc agggctgcga ctagcacgaa
     1201 gagcaccagg caaacgttga tcagcaggtt cattgggagg cgaaatatgg caaaagcatg
     1261 gggagaagca aacgccgaac atccaacgtc gaagtcagag cgttcagcgt tgggcgttcg
     1321 atgtttgttt gatttcgtcc caaatcgcat ccatctcggc caactccact tcgcccaatt
     1381 tcctgccgcg cattttgagt tcgtcttcca atcgattgaa gcgggcgacg aacttgtcag
     1441 tggcagattg gagcgcggtt tctgcatcga ttttgcactt ccgcgccagg tttacgatgg
     1501 caaacagcag atcgccaatc tcgtcttcga tcctttcgtg ctgttctgac cggattgcct
     1561 ctttggtctc atcaagctct tcttccacct tggccatcac atcgcgcagt gctgtccagt
     1621 cgaaattcac ccgggcggct ttggattgcg ccttttgcgc gcgcaccagc gcgggcaagg
     1681 ctttcggcaa actggccagg aaatgcgagt cggccttttt ttcttcgcgt ttgatcgctt
     1741 cccattgttt aagcacggcg cccgcgtcgc gtgcttcgct cgtgccgaac acatgcggat
     1801 gccgccggat gagtttgtcc gacacctgct caatcacctc ctcgatgtcg aaccggccga
     1861 tctcgcgcgc gatttgggca tgcatcacta cgagcaacaa aagatcgccg agttcctcgc
     1921 gaaaatgtgc atcgtcctga gcgcgcgcgg cctcggccgt ttcgtatgcc tcctctatga
     1981 gcgccggcaa taacgactga ttggtttgct cgcgatccca cgggcaacca tcaggagcgc
     2041 gaagtttcgc gacgatgtcg cagagattcg cgaagtcatc ggtgatttgt ggtcgatgat
     2101 caggcataag ggaacccctt cgaacgtaaa gcttcactga gcacggatct atcgggaatc
     2161 caatgcgact tgcaacgatc gcactttgtt ctttgcgcga taatgtgcgt taaaagctgc
     2221 acattccgcg acaaagcgat gagactgacg attttgacgc ctcggccacc gatcgacgac
     2281 catcagtcag tctcagtatc ggccttgtac ggcatcgccg atcgtctgtt gacgaatcgt
     2341 ttttagtttt tggtactgct caggtgacag aatggtcttc atttgcggat ccgtctgctg
     2401 atgaatagcc ttgagttgtt gtattttctg tatttttgga agcgaattgt cgttcttgat
     2461 tgcctggact ttgggtactt cgctcgcaag aatgggcagg actttctcct tttgttgggg
     2521 cgtgaggcca agctgttgtg ctatcgcctg agcctttgac atcgcacccc ctttttgagc
     2581 aaacgaggcg ggtgccagca gggcaaagat cgcgacggat aaagtcgagg taacgaggtg
     2641 agtgtgtttc ttcatatttc tcctttgatt tggcgcgcac ggtggtgagg gcggttcatt
     2701 aagtcaagcg ccaatcgcgg cagaccgatc gttcggagga atctctcttg aaaccgtttc
     2761 taattttctt gtacaacggc gccgaacatc gctgaagatc ccagcggcga tttccaccta
     2821 caacagatgc cacttcagct cgcgcgagtt gcgtttcctt tcccataaac ggattccacc
     2881 gaggaatgcg ttttcatttt gaccgcgcac gattcccttc ggcaatcgat cgaaccggtg
     2941 caccaggccg ccgccaagga cgacgtaatt ggcaatgaac gagcgcttta attggccgac
     3001 ggcataaagg acttcacgtt tccattttct cttgcccaat tccgccaggc cggggaca
//
LOCUS       DATDAJ010000269         3242 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1515373, whole genome shotgun sequence.
ACCESSION   DATDAJ010000269 DATDAJ010000000
VERSION     DATDAJ010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3242
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515373"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1248
                     /locus_tag="VIS53_06705"
     CDS             <1..1248
                     /locus_tag="VIS53_06705"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEY5767507.1"
                     /translation="KTAKKPRPPKKRGKASVQSGTAALYRFRAIYRIWPDFKISPCIT
                     KSLATVKADAAQTSFSAQGVDITWVIMDSGIDANHPHFVRHGNVDPASPLHGDFTDTP
                     NVPKGANAALIDRFGHGTHVAGIVAGEQVADGTKAQAQKMRAVTRSVKGYEEGDSPAV
                     ETREVMLSSIRGMAPRCHLVSLKVLDDEGNGEVSNLIAAIAHIQEKNGHGRLNLIHGV
                     NISLGYDFDPEWFACGQSPLCVEINRLVRSGVVVVVAAGNTGYGALAAQQRTTNAGMP
                     VTINDPGNADLAITVGSTHREMPHVYGVSYFSSKGPTGDGRMKPDLVAPGEKILSAAT
                     GKLLMDRAEGKQCEYVEDSGTSMAAPHVSGVIAAFLSVRREFIGEPERVKQIFLGAAT
                     DLKRERSFQGAGLIDLMRAIQSV"
     gene            1268..2590
                     /locus_tag="VIS53_06710"
     CDS             1268..2590
                     /locus_tag="VIS53_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767508.1"
                     /translation="MNNVAGIPYAAAHFDKDGAALDKQKVTVPDGTTDVIVASHGWNN
                     NEEQAERLYTELFTNFAAVASDQLQEKRIAIMGVIWPSKKFTDVVDAAVAEQGPGGGA
                     GLATSSAAADETIKAKLDVIATMFDKKAAKKITAAKNQIGKLESDLDARRKFVDELRS
                     LLDDSAAHEEDNSALFFKLDGSAMLEKLKMPTPLVASGGGGGGGAASLGAHLTSTSAG
                     GAAGLGDIFSGIKSGAIRFLNYLAYYEMKKRAGTVGQKGVAPLLDRVADHVQRIHLVG
                     HSFGCRVVTAAAAISTTDKLQSMSLLQAAFSHNGFSKSMNGFFRTVVDNHRIKGPIVL
                     TYTPNDRAVGIAYPVASRLSGTVASALGDANDKFGGLGRNGAQKMEPGEVVVGVDRLL
                     AVGGSYSWQSGRFNNLEGSKYIVDPSGRDAHGFVTGKEVAWAISRAMA"
     gene            2631..>3242
                     /locus_tag="VIS53_06715"
     CDS             2631..>3242
                     /locus_tag="VIS53_06715"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HemK/PrmC family methyltransferase"
                     /protein_id="HEY5767509.1"
                     /translation="MTVLEVLQSTTGYFQKRNIDSPRLNAEHLLAYVLGRKRMELYLD
                     FERRLRESELAPLRELVKRRGTGEPLQHLLGTVEFCGRSFRCDKRALVPRPETEQLVE
                     LLISHFKSENAYWRMVDVGTGSGVIALTLAAEFPKAEVIGADISEDALMLARENAERL
                     DLADRVRFLRSNLLKSVQPGFDLIVANLPYVSTEDRQNLSREVL"
BASE COUNT          733 a          835 c          985 g          689 t
ORIGIN      
        1 aaaacggcca aaaaaccgcg gccgccgaag aaacgcggaa aagcctcagt gcagtcgggt
       61 acagcggcac tgtaccgttt tcgtgccatc taccgtatct ggcccgattt caagatttca
      121 ccctgcatta cgaagtcgct cgcgacagtg aaagcagatg cggcgcaaac ttcgttcagc
      181 gcgcagggcg tggatatcac ttgggttatt atggattcgg gcatcgacgc gaatcatccg
      241 cactttgtgc gacacgggaa cgtcgatcct gcttctccgc tccatgggga ttttaccgat
      301 acgcccaatg tcccgaaggg tgctaacgct gcgttgatcg atcgctttgg acacggcaca
      361 catgtggcgg gaattgtggc gggagaacaa gtggccgatg gtacgaaagc gcaggcgcaa
      421 aaaatgcgtg ccgtcacccg gtcggttaag ggctacgaag agggggactc gcctgcagta
      481 gagactcgtg aggttatgct cagttccatt cgtggcatgg cgcctcgttg tcatctcgtt
      541 agtctgaagg tgctcgacga cgaaggtaac ggcgaagtca gcaatttgat tgcggcaatc
      601 gcgcacatcc aggaaaagaa cggccacggt cgtttgaatc tgattcacgg agttaacatc
      661 agcctcggat atgatttcga tccggagtgg tttgcgtgtg gacaaagtcc gctgtgcgtt
      721 gagatcaatc gcctggtgcg atcgggcgtg gtggtcgtag tggccgcagg caacaccggc
      781 tatggcgcgc ttgcagcgca acagcggaca acaaatgccg ggatgccggt tacaatcaac
      841 gatccaggca acgcggacct agccatcacc gtcggctcca cgcaccgcga gatgccgcat
      901 gtgtatggcg tttcgtattt ttcctcaaaa ggtccgactg gcgatggacg aatgaagccc
      961 gacctcgttg ccccgggtga gaaaattctc tctgctgcaa cgggaaagct gttaatggat
     1021 cgagcagagg ggaaacaatg cgaatacgtc gaggacagcg ggacaagcat ggcggccccg
     1081 cacgtcagcg gtgttattgc ggcattcctc tccgttcgac gggagttcat cggcgaaccg
     1141 gaacgggtaa agcagatttt tcttggggca gctaccgact tgaagcggga gcgctctttt
     1201 caaggcgcgg ggttgattga tctcatgcgc gccattcagt ctgtgtaaaa catgatgcaa
     1261 gaagtttatg aataatgtcg caggtattcc ttatgcggcc gcacatttcg ataaagacgg
     1321 tgcggcttta gacaaacaaa aagtcacggt ccccgacggc acgacggacg ttatcgtcgc
     1381 gtcgcacggg tggaataaca atgaggaaca ggcggagcgg ctgtataccg aattgttcac
     1441 caactttgca gcggtcgcct cggatcagct tcaggagaaa aggatcgcaa ttatgggagt
     1501 catctggccg tcgaagaaat ttaccgatgt tgttgacgct gctgttgctg aacaagggcc
     1561 cggcggtggt gcgggattgg caacgagttc cgccgcggcg gacgaaacta tcaaggccaa
     1621 gctcgacgtc attgcgacaa tgttcgacaa gaaagcggcg aaaaagatca ccgctgcgaa
     1681 gaaccagatt ggcaagctgg agagtgatct cgatgcgcgg cgaaaatttg tagacgagct
     1741 gcggagccta ctcgatgaca gcgccgcgca cgaggaagat aattctgcgc tcttcttcaa
     1801 gctcgatgga tcggcgatgc tcgagaagct aaagatgccg accccgctcg ttgcttcagg
     1861 cggaggaggt ggaggaggcg ccgcgtcgct tggcgctcat ctgacaagta cgtcggccgg
     1921 cggcgcagct ggactgggtg atattttttc tggaatcaaa tccggcgcga ttcggttcct
     1981 gaattatttg gcctactacg aaatgaaaaa gcgcgccgga acagtcggcc agaaaggtgt
     2041 ggcgcccctg cttgatcgag tggccgacca cgtgcagagg attcatttgg tgggccacag
     2101 ctttggctgt cgcgtcgtga cggcggcggc ggcgatatct acgacagata aattacaaag
     2161 catgtcgctt ttgcaggctg ctttctcgca caacggattc tcgaaatcga tgaacggatt
     2221 ctttcgcacc gtggtggaca accaccgcat caaaggtccg atcgtcctta cttacacgcc
     2281 aaacgatcgg gccgttggga tcgcttatcc ggttgcttcg cgattgtccg gcacggttgc
     2341 atctgctctt ggcgacgcga atgataaatt tggcggcctt ggccgaaacg gtgcacagaa
     2401 aatggagccc ggcgaagttg tggtgggcgt tgatcggctg ctcgcggtgg ggggcagcta
     2461 cagctggcag tccggtcgtt ttaacaatct ggaaggcagc aaatacattg tagatccaag
     2521 cggccgcgat gcgcacggct tcgtcaccgg caaagaagtt gcatgggcca tcagccgcgc
     2581 gatggcgtag ccgactgcgc gcgaagagcg cctccgtagt aagctgtcac atgactgtgc
     2641 tcgaggtctt gcaatcgacg acgggctatt tccagaagcg caacatcgac agtccgcgtt
     2701 taaatgcgga gcacctgttg gcgtacgtac tcggccggaa acggatggag ttatatctgg
     2761 acttcgagcg ccggttgcgg gaatcagagc tcgcgccgtt gcgcgaattg gtgaagcgcc
     2821 gcggtacagg cgaaccactt caacatctgc tcggcacggt cgaattctgc gggcgcagtt
     2881 ttcgctgcga caaacgcgca ctggtaccgc gacctgaaac tgagcagctc gttgagctgc
     2941 tgatttcaca cttcaaatcc gaaaatgcat attggcgtat ggtcgatgtt ggaaccggca
     3001 gcggcgtcat tgcgctcact ctggctgcgg aatttccaaa agccgaggtc atcggggccg
     3061 acatttccga agatgctctc atgctcgccc gcgaaaatgc cgagcgactc gacctggcgg
     3121 atcgtgtccg gttcctgcga agcaacttgc ttaaaagtgt gcaaccaggc ttcgatctga
     3181 tcgttgcgaa tcttccgtac gtttcgaccg aagatcggca gaatctttct cgcgaagtgt
     3241 tg
//
LOCUS       DATDAJ010000270         6105 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1515963, whole genome shotgun sequence.
ACCESSION   DATDAJ010000270 DATDAJ010000000
VERSION     DATDAJ010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6105
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1515963"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..941
                     /locus_tag="VIS53_06720"
     CDS             <1..941
                     /locus_tag="VIS53_06720"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5767510.1"
                     /translation="QFGARVEYDAASIDSSNPELTSLTSPSQKDQEFWPISGAAGALY
                     DFAKDWQLALNLTYSQRAPTPEELFARGPHDATFQFIIGDPNLDVEINRTVDLSLRKT
                     AGRVTGFISGYYTHYDGFIDFTPTGELEDGLQVFIYTPKNATFYGGEGRVDFHLLPLE
                     ITRANEPSDSKSVKNVIMGGEETTKKNPNDLYLRLQADYVHAEDSSGEPLPRITPFRY
                     GISLNYESEHWLASIEGWRVDAQNSVAEFETPTPGYTFLNASIGYKFQWGRTYNYVYV
                     RGTNLLDAEARDHLSFLKEVMPLPGRGVVVGWRTTF"
     gene            1024..1962
                     /gene="dmeF"
                     /locus_tag="VIS53_06725"
     CDS             1024..1962
                     /gene="dmeF"
                     /locus_tag="VIS53_06725"
                     /inference="COORDINATES: protein motif:HMM:NF033827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HEY5767511.1"
                     /translation="MNRIDHSRFRKAHDFVPDFSRAERRTRVVIGITAAMMVVEIIAG
                     LMSNSMALLADGWHMSTHVLAFLITAAAYYFARTQAGNARFSFGTGKIGVLGGFTSAV
                     VLAIVAFLMAGESMHRLFTPLEIHFNEAIGIACLGLLVNLACAVLLADRHHEHDGGSA
                     HDHDLNLRAAYMHVLTDAFTSVLAITALTGGKFFGWAWLDPVVGIVGSVVVFSWSYTL
                     IRDTSGILLDRTPPSSDLPDEIRRAVESDGDSVVTDLHVWQVGTGKFAAMVSIVAHEP
                     KSCDSYRALLRGYHELVHVTIETHHCPEDHASAASA"
     gene            1963..2721
                     /locus_tag="VIS53_06730"
     CDS             1963..2721
                     /locus_tag="VIS53_06730"
                     /inference="COORDINATES: protein motif:HMM:NF014582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEY5767512.1"
                     /translation="MANTLWQVIAAYIFAVAGGSISASLRLEHKPLCALISFAAGTLL
                     GVTIFAILPESFGACPWWAVLLALITGYALFFFISKRVHHVCPACAASHFDADATRHF
                     SEIASALIVALAIHSTTDGLALGIQGEAPATGAIEWSLFSALCIHKVPEGLALGGLLI
                     GAGLQRAAAVGWVAAVEATTLLGGVIGYFFLTNISIFWLGLIMAHVGGGFIYLATHAV
                     VGEMLKHGKKLVLTSFALGIALIAVLNIALRWMG"
     gene            2921..4228
                     /gene="lysA"
                     /locus_tag="VIS53_06735"
     CDS             2921..4228
                     /gene="lysA"
                     /locus_tag="VIS53_06735"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR01048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEY5767513.1"
                     /translation="MHLFHYQDDSLHCEDVDLTRVATEVGTPTYVYSAGTILDHYARL
                     DVALAPLDHLICYAVKANSNRAILNLLAGAGAAFDIVSGGELFRVLAAGGDPAKCTFA
                     GVGKSVDEIEYALERGVYSFNVESEAELETIERIARAKKMSAPIALRVNPDVDPHTHQ
                     YISTGSQENKFGIALNQIRAVYERAARMSNIEIVGVQMHIGSQITEAKPFASAIEKVA
                     PLVRELKSKYAIKFFSIGGGMGIIYRRALESGAGKWWRDHGGEPSAFSVRDYAEAIVP
                     PLRDLSIRTLVEPGRFLIGNAGVLLTRVRYIKQTGSKKFAIVDAGMNDLIRPALYQSY
                     HEIVPVKQPKTERERKISEIDIVGPVCESGDFFALGREMPEVHEGDLLAIMSAGAYGF
                     VMASNYNSRPLPTEALVRGDKFALIRKRQTWKDLMREEVDADW"
     gene            4348..5046
                     /locus_tag="VIS53_06740"
     CDS             4348..5046
                     /locus_tag="VIS53_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767514.1"
                     /translation="MMKRLLLVCCLSMVALGLRAAPPSGGEYVILVGGPSMYQWEKYK
                     AVPHDHWWANFVRAARLRTEQLRTQLPDTKITWLVYKQGYVDRATQEHQDLISLIGTV
                     RDKFNFNLIWFGPGKEVIDYLNNGQPRDQMKVTGFEFFGHSNRACFMFDYSNNIESAC
                     KSWLHENDLKQINRRVFARGAYVKSWGCHTGESMSKKWYAATGTRMIGAIGKTQFMME
                     ELPILCSEDGRWVN"
     gene            5211..5651
                     /locus_tag="VIS53_06745"
     CDS             5211..5651
                     /locus_tag="VIS53_06745"
                     /inference="COORDINATES: protein motif:HMM:NF020157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 family protein"
                     /protein_id="HEY5767515.1"
                     /translation="MNWKKFFFAFIAAFVFLFAFGFLWYATLMHDAHREVPTLLRPEA
                     DLQSYFGWLALGQFVMAFFFTLLCARYIPSGRAGAGALLGLLVGLVYAGPHLISFAVQ
                     PLTFKILCGWIAGAVIQFTIAGAIVGAIYKPATAHIMYVKERSR"
     gene            5731..>6105
                     /locus_tag="VIS53_06750"
     CDS             5731..>6105
                     /locus_tag="VIS53_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEY5767516.1"
                     /translation="MSSQTPAALGYRMPAEWEPHTATWLSWPRREGISFPDSFDRVLP
                     ALRAMVEALIESEQVCINVCNGAHKAEARSVLSGLPMERITFYRVPTNEPWCRDHGPI
                     FLTRDRDPRLVVVDWGYNAWGNK"
BASE COUNT         1302 a         1665 c         1765 g         1373 t
ORIGIN      
        1 tccaattcgg tgcgcgcgtc gagtacgacg ctgctagcat cgattcgagt aatcccgagc
       61 tgacgtcgct cacgtcgccg agtcagaagg atcaggaatt ctggcccatc agcggcgctg
      121 ccggtgcgct ttacgatttc gctaaagact ggcaactcgc gctgaatctg acgtattcgc
      181 aacgcgcgcc gacgcccgag gaacttttcg cgcgcggccc ccacgacgcg acgttccaat
      241 tcatcatcgg cgacccgaat ctcgacgtcg aaatcaatcg gactgttgat ctcagtctgc
      301 gaaagaccgc cggccgcgtc acgggattta tcagcggtta ttacacgcat tacgacgggt
      361 tcattgattt cacgccaacc ggagaactcg aggatggtct ccaggttttc atttacaccc
      421 caaagaacgc gacgttctac ggcggcgaag ggcgagtgga ttttcatctg cttccactgg
      481 aaatcacaag ggcaaacgag ccgtccgatt caaaatcggt taagaacgtg atcatgggag
      541 gtgaagaaac cacgaagaaa aatccgaacg atctctattt gcggcttcag gccgactacg
      601 tgcacgcgga agacagcagc ggcgaaccgc tcccgcgcat cacgccgttt cgttacggta
      661 tttcgctcaa ttacgagagc gaacattggc ttgccagcat cgaaggctgg cgggtggacg
      721 cgcaaaatag cgttgctgaa ttcgaaacgc ctacacctgg ctacacattt ttgaacgcga
      781 gcatcggata caagtttcag tggggacgca catacaatta tgtatacgtc cgcggcacta
      841 acctgctcga cgcggaagcc cgcgatcatc tttcatttct gaaagaagta atgccgctcc
      901 cagggcgcgg cgtcgtggtt ggatggcgca ccacgtttta gaacgaaagc cggcgcagaa
      961 ctggcgcttt ggaataacag tgcgcattgg ccgttttcgt tgatggcgtt aaactcaatc
     1021 gagatgaatc gcatcgatca ttcgcgtttt cggaaagcgc acgatttcgt gccggatttt
     1081 tcgcgcgcgg aacggcgcac gcgcgttgtg atcggtatca ctgccgccat gatggttgtc
     1141 gagatcatcg ccggcctgat gtcgaactca atggctttgc tggccgatgg ctggcacatg
     1201 agcacgcatg tcctcgcgtt cctcataacg gccgcggcgt actatttcgc ccgaacacaa
     1261 gccggcaatg cgcgtttcag tttcggcacg ggaaaaatcg gggtgctagg cgggttcacc
     1321 agcgcggtcg tgctcgcgat tgtggcgttc ctgatggcgg gcgaatcaat gcaccggctc
     1381 tttactccac tggaaattca cttcaacgaa gcaatcggaa tcgcttgcct tggcttgtta
     1441 gtgaatctgg cgtgcgcagt cctgctggcc gatcgccacc acgaacacga cggcggcagc
     1501 gcacatgatc acgatttaaa tctgcgcgca gcatatatgc acgtactgac cgatgcgttc
     1561 acttccgtcc tcgcgatcac ggcgctaaca ggtggcaaat ttttcggctg ggcgtggctt
     1621 gatccggtcg ttgggattgt cggcagtgtc gtcgttttct cgtggtctta caccctgatc
     1681 cgcgatacca gcgggattct gctcgatcgt acaccgccgt catcggattt gcctgacgaa
     1741 attcgtcgcg cggtggagag cgatggcgat tcggtagtga ccgatctgca tgtctggcag
     1801 gtcggcaccg gaaaatttgc cgcgatggtt tcgatcgtgg cgcacgaacc gaagagctgc
     1861 gattcgtatc gagcgctgct gcgcggatat cacgaactgg tccacgtgac gatcgagacg
     1921 caccattgcc ccgaagacca cgcgtcggcc gcgagcgctt gaatggccaa cacgctctgg
     1981 caggtcattg cggcttacat tttcgctgtc gccggcggat cgatcagcgc ctcactgcgc
     2041 ctcgagcata agccgctttg cgcgctcatc agtttcgcgg ccggaacact tctcggcgta
     2101 acaatctttg cgattttgcc cgagagtttt ggcgcatgcc catggtgggc ggtgttgctg
     2161 gcgctaatca ccggctacgc gcttttcttt ttcatcagta aacgtgttca tcatgtttgc
     2221 ccggcgtgcg cggccagtca tttcgacgct gatgccacgc gacatttcag cgaaatcgct
     2281 agcgccttga tcgtcgccct ggcaattcat agcacgaccg acggtctggc tttgggaatc
     2341 cagggcgaag cgcctgcgac tggtgcgatc gagtggtcgc tgttctctgc tttgtgcatc
     2401 cacaaagttc cggaaggtct cgcgctcggt ggtctcttga tcggcgcagg actgcaacgc
     2461 gcggccgcgg ttggatgggt ggcagcggtc gaagccacaa cgctcctcgg cggtgtcatc
     2521 ggttatttct tcctgacgaa catttccatc ttttggctcg gcttaattat ggcgcacgtc
     2581 ggcggcgggt ttatctattt ggccacacac gcagtggtcg gagaaatgtt gaagcacgga
     2641 aagaagctcg ttttgacgag cttcgcgctg gggatcgctc tcatcgcggt tctcaatatt
     2701 gcactgcgat ggatggggta acgcacgcgt cccgcgtgtt ggcgagcgcg tcctcgcgat
     2761 cgcgaacttt ttctcaaagt ccataccaca aacgcggcgt tgttcatcaa aagcctgttt
     2821 cggcgcgacg ccgaaaccaa cacgcgagac gcgtgcgcta ccctgagaac gcgcgactca
     2881 acgatttgga aatcgccgac tattatcgct aaattcgcat gtgcatcttt tccattatca
     2941 agacgacagc ctgcattgcg aagacgtcga cttaacacgc gttgccacag aagtcggcac
     3001 gccgacttac gtctacagcg cggggacaat tctcgatcac tacgcacgac tcgacgtcgc
     3061 gctcgcgccg ctggatcacc tgatttgtta tgcggtaaag gcgaactcga atcgcgcgat
     3121 cctgaacttg ctcgcaggtg cgggcgccgc cttcgacatt gtttcggggg gcgaattgtt
     3181 tcgtgtgctc gcggccggtg gcgatccggc caagtgcaca ttcgcgggcg taggcaaatc
     3241 agttgacgaa atcgagtacg cgctggagcg aggtgtctac agcttcaacg tcgagagtga
     3301 agctgaactg gagacgatcg agcggatcgc ccgcgcaaag aaaatgagcg cgccaatcgc
     3361 attgcgcgtc aaccctgatg tcgacccgca cacacatcag tacatctcga ccggctccca
     3421 ggagaacaag ttcggcattg cactgaatca aatcagggcg gtttatgaac gcgcggccag
     3481 aatgagcaac attgaaattg tcggcgtgca gatgcacatc ggttctcaaa tcactgaggc
     3541 gaagccgttc gcgagtgcaa tcgaaaaagt ggcgccattg gtgcgcgaac tgaaatcgaa
     3601 atatgccatc aagtttttca gcatcggagg cggtatggga atcatttacc ggcgcgcact
     3661 ggagagcgga gcaggcaaat ggtggcgcga tcacggtggc gaaccgtccg cgttcagtgt
     3721 gcgcgattac gctgaagcaa ttgtgccgcc gttgcgcgac ttgtctattc ggactcttgt
     3781 cgagcccggc cgttttctta tcggcaacgc cggcgttttg ctcacccgcg ttcgttacat
     3841 caagcaaacg ggcagtaaaa aatttgccat tgtcgatgcc ggcatgaacg atctcatccg
     3901 gccggcgcta taccagagct atcacgagat tgtgccggta aagcagccga agactgagag
     3961 ggagaggaag attagcgaga tcgacattgt cggaccggtg tgtgaatcgg gcgatttttt
     4021 tgcgctcggc cgggaaatgc ctgaagtgca tgaaggcgat ttgctcgcaa tcatgagcgc
     4081 cggcgcctac ggatttgtga tggcatcgaa ttacaattcc cgtccgctac cgacagaagc
     4141 gctggttcgc ggcgataagt tcgcgctgat ccggaagcgg caaacgtgga aagacctgat
     4201 gcgcgaggag gtggatgcag actggtaggg agggaagcca gcatgtccgc aaaggtcggc
     4261 gcgctctcgc cagggcgagc aggctgtgat cgcaccctcg cacttgcgga atttcgtgct
     4321 ctgcataaat agtcatcctc accggaaatg atgaaacgtc tgttactcgt atgctgtttg
     4381 tcgatggtcg cgctcggtct gcgggccgcg ccgccctcag ggggtgaata tgtaatcctg
     4441 gttggtggac cgtcgatgta tcaatgggaa aaatataagg cagtcccgca cgatcattgg
     4501 tgggcgaact ttgtgcgggc ggcgcgtttg cgcaccgaac aattgcgcac ccagcttccg
     4561 gatacgaaga tcacctggct tgtttacaag cagggctacg tggaccgtgc aacgcaggag
     4621 catcaggacc tgatcagtct aattggtaca gtccgcgaca agttcaattt caatctcatt
     4681 tggttcggcc caggcaagga ggtcattgac tatttgaaca acgggcaacc tcgagatcag
     4741 atgaaggtca cgggtttcga atttttcggg cattcgaacc gggcgtgttt catgttcgat
     4801 tacagcaaca acatcgaaag cgcctgtaaa tcctggctgc acgaaaacga tctgaaacaa
     4861 atcaatcgcc gtgtcttcgc tcgtggggct tacgtcaaga gctggggctg ccataccggc
     4921 gagagcatgt ccaagaagtg gtacgcagcg actgggacac gcatgattgg cgccatcggc
     4981 aagacccagt tcatgatgga agaactaccg atcctctgct ccgaggacgg caggtgggtg
     5041 aactgatttc cgatgtccga tttccgattg acaccggcct tcaggccggt cgtttatgcg
     5101 cgagtcggaa cgagccgttt taagtttgag gtcgacaatc gccggaggtc ttgcgatgaa
     5161 agtacgcggg tgcgataggc ggcacagtaa aacctcaata gaaagaagct atgaattgga
     5221 agaaattctt tttcgcattc atcgcggcgt tcgttttcct cttcgcgttc gggttccttt
     5281 ggtacgcaac cttaatgcac gacgcgcatc gggaagttcc gacgcttttg cgaccggaag
     5341 ccgatctaca gagctacttc ggttggctcg ctctcggtca gttcgtcatg gcattctttt
     5401 tcacgctgct gtgtgctcgg tatatcccga gcggacgcgc aggcgccgga gcgctgctcg
     5461 gccttctagt gggattagtg tacgcagggc cacacttgat ctcgttcgca gtccaacctt
     5521 taacgtttaa aatcctttgc ggctggattg ccggcgcggt aatccaattc acaatcgcag
     5581 gcgcaatcgt cggcgcgatc tacaaaccag cgactgcgca cattatgtac gtaaaggagc
     5641 ggtcgcgctg accccttgag ccaacttccc caagtctaaa ttctgagtcg atcgttggac
     5701 gttgagcgta gcgcgttcga cgttggtttg atgagctcac aaactccagc cgcgctcggt
     5761 tatcgcatgc cggcggaatg ggaaccgcac acagctacat ggctttcgtg gccgcgacgc
     5821 gagggcatta gttttcccga ctcgttcgat cgcgtgttgc ctgcgttgcg tgccatggtc
     5881 gaagccttga tcgaatccga gcaggtctgc atcaacgttt gcaacggcgc gcataaagca
     5941 gaagcgcgct ccgttttgag cggactgccc atggaacgga tcaccttcta tcgtgtcccc
     6001 accaacgagc catggtgccg cgaccacggc ccgatttttc tcacacgcga tcgcgacccg
     6061 agacttgtcg tagtggactg gggttacaac gcatggggaa acaaa
//
LOCUS       DATDAJ010000271         3327 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1527295, whole genome shotgun sequence.
ACCESSION   DATDAJ010000271 DATDAJ010000000
VERSION     DATDAJ010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1527295"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..193)
                     /locus_tag="VIS53_06755"
     CDS             complement(<1..193)
                     /locus_tag="VIS53_06755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767517.1"
                     /translation="MLIRNVALVLLCATSSGLGQGQPAAPTPSVVYALRNPDSINQYK
                     TNPRIVREMVNRLVIAVTGQ"
     gene            328..1482
                     /gene="hemW"
                     /locus_tag="VIS53_06760"
     CDS             328..1482
                     /gene="hemW"
                     /locus_tag="VIS53_06760"
                     /inference="COORDINATES: protein motif:HMM:TIGR00539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEY5767518.1"
                     /translation="MEYEKLSLIQHLYVHIPFCARICPYCAFYKDLLDRSQTSRFCEA
                     LLGELDSWVRRPGCGVRSARHAETAIVPSTIYFGGGTPTALNIAQLEFLLRGFHERIE
                     LSQLVESTIEANPGSVSARKAALLKKFGVNRISLGVQSWDDELLKLLGREHNAQHAEE
                     SFRILRDADFGNINVDLMFGLPGQTVDQWRATLEKTIALQPEHISTYCLTYEEDTEFF
                     LRHARGEFRQDADADADFFEMTMAILEDAGYRHYEISNYARPGFESVHNRAYWLGKDY
                     LGIGPSAVSTIGMQRWQNVCDYRAYIDRALAGQSPRESSENLTDQMKRIERIALSLRT
                     RDGVSASELKDFGSETDELVAMGLFRKSNGNFILTPKGKALTDSITEALL"
     gene            complement(1730..>3327)
                     /locus_tag="VIS53_06765"
     CDS             complement(1730..>3327)
                     /locus_tag="VIS53_06765"
                     /inference="COORDINATES: protein motif:HMM:NF024810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="kelch repeat-containing protein"
                     /protein_id="HEY5767519.1"
                     /translation="QLGAATPPQSLPLLVVLNGYIAATRGTCFRPLLILRNCARQTKS
                     SLRESQIQVQQPPSAFIGTHDETPSVARWASATKSLDICGALRIKGCLLHRSAIKVKQ
                     DINSAIKAHLIRGAFYLLLVVCAIPFAPAQSRSRGTAKPGVVKPTALPNLTSLSSTIS
                     TTHAVRANPDFAPPGVIQEQLSGLPRDGAASLTSGAGMVKNLPAPLFPEGGCGTPGPW
                     STATPGPPARYRAGGCTDGQFVYVYGGGNSSGGYYNDLWRWTPATQTWTQLANMPTAK
                     QNIQGAYWNGKIYVPGGFNGAHITENAIYDIATNMWTTGLPLPAAQTGTNVAFNNKIY
                     NFGGDPGPQSTVTIYDIATNTWSNGATMPVAITYGRAAVAGLGTQYAYYAGGITTVTV
                     NTLYRYDFAANTWATMAPLQTARTSEELMTSPLGIELYAVMGGDATFFTGVPLPVSVE
                     IYHIGSNFWSYGNPVVTKAAAPSGGRAGVKLMVQGGVDNTTYYDTVQVSVVPCGTPVP
                     TPTASPTRETPRPRPRPTAAPRP"
BASE COUNT          736 a          874 c          985 g          732 t
ORIGIN      
        1 actggccggt cacagcgatc acgagccggt tcaccatttc gcgcacaatg cgcggatttg
       61 ttttgtactg gttgattgaa tcaggattac gcagcgcgta aacaaccgag ggcgtcggcg
      121 cggccggctg cccttgtccc agcccggacg aggtggcaca aagcaaaacg agagctacgt
      181 ttcgaatcag catgagggag tcgatggcag acggatttta tgagtaaagg cgcgaatcac
      241 aacacttcag caaggcctac agattttgta gggcgtttct gtgaaacgcc catccaagaa
      301 acggcgtctg acacagacgc cctacaattg gagtacgaaa agcttagcct cattcagcat
      361 ctctacgttc acattccatt ctgcgcgcgg atttgtccgt attgcgcgtt ttacaaggat
      421 ttgctggatc gctcgcagac ctcgcgattt tgtgaggcgc tcctggggga gctcgatagc
      481 tgggtgagaa ggccaggctg cggcgtccgg tcggcgcggc acgccgaaac tgccatcgtt
      541 ccttcgacga tttacttcgg cggcggtacg cctaccgcgc ttaacatcgc gcaactggaa
      601 ttcctgctgc gcggattcca tgaaaggatc gaattatcgc aattggttga atcgaccatt
      661 gaagcaaatc cgggaagcgt ctccgcgcga aaggccgcgc ttttgaaaaa atttggagtc
      721 aaccggatca gcctcggcgt gcagtcgtgg gacgacgaac tgttgaaatt gctcggacgc
      781 gagcacaacg cgcagcacgc tgaagaatcg tttcggatct tgcgcgatgc agatttcgga
      841 aacatcaatg tcgatctgat gtttggtttg cccggtcaaa ccgtagatca atggcgtgcg
      901 accctggaga aaacaattgc gctccaaccg gaacatatct ccacttattg cctgacgtac
      961 gaagaggaca cggaattttt cctgcgccac gcgcgtggtg aatttaggca ggatgcggat
     1021 gcggacgcag atttcttcga aatgacaatg gcgatcctgg aagatgccgg ttaccggcat
     1081 tacgaaatct cgaactacgc gcgtcctggt tttgaatcag ttcataatcg cgcctactgg
     1141 ctcggcaaag attatctggg aatcggaccg agcgcggtct cgactattgg catgcagcgc
     1201 tggcaaaatg tctgcgatta tcgcgcgtac atcgatcgcg ctcttgccgg ccaatctccg
     1261 cgtgaatcga gcgagaatct cacggatcaa atgaaacgga tcgagcgaat cgcgctttct
     1321 ctgcgcacgc gcgatggagt ttccgcttcg gagctgaaag acttcggcag tgagactgat
     1381 gagctcgtcg cgatggggtt attccgaaaa tccaacggaa atttcatttt gacgccaaaa
     1441 ggtaaagcgc tgaccgactc catcaccgaa gcacttcttt gataaacctg tgccgcaagt
     1501 ggtcaacaat ccgtaaagcc gattggagtt gcggctgcgt ctcagcgatt gactctaacg
     1561 ggcgaacgat ctggattgca gacccacatc gggatgaagg aaagcgtttc gatgtgcatg
     1621 cggatgaaaa gctgacgact tttctgaaac tcgaatttgc gatttgtgcg aagggattct
     1681 gggtgcagtc gcgtacgcaa gtgccgggcg ggcgattacg ccgcgcaggt caggggcgcg
     1741 gcgctgctgt aggacgcggc ctcggcctcg gtgtttccct cgtcggacta gctgtaggtg
     1801 tcggaactgg tgttccgcac ggcacgacag aaacctgcac agtgtcgtag taggtcgtat
     1861 tgtccacacc gccctgcacc attagcttaa cgcctgcccg gccgcctgac ggtgctgccg
     1921 ccttggttac aactgggttg ccgtagctcc agaaattcga gccgatgtga tagatttcta
     1981 ccgataccgg caggggcact cctgtgaaga aggttgcgtc accccccatt acggcataaa
     2041 gctcgatgcc aagcggggag gtcatcagct cctcactggt gcgcgccgtc tgaagcgggg
     2101 ccatcgttgc ccaagtgttc gccgcaaaat cgtagcgata aagggtgttg accgtgaccg
     2161 tggtgatacc acctgcgtaa taggcatact gagtccctaa gcccgcaacc gctgcccggc
     2221 cataggttat ggcgacaggc attgtcgctc cgttagacca agtgttggta gctatgtcgt
     2281 agatcgtgac cgtgctttgc ggtccggggt cgccaccgaa attgtagatc ttgttattga
     2341 aagccacgtt agtaccagtc tgtgctgccg gcagagggag accggtggtc cacatgttgg
     2401 tagcgatatc gtagatggca ttctcggtaa tatgagcgcc gttaaagccg ccggggacat
     2461 agatcttgcc attccaatag gcgccttgaa tgttctgctt ggcagtcggc atgttggcaa
     2521 gttgcgtcca ggtttgcgtc gccggagtcc aacgccagag gtcgttatag taaccgccac
     2581 tagaattacc accgccgtat acgtaaacaa attgtccatc ggtgcatcca ccggcacgat
     2641 agcgagccgg cgggccaggc gtggcggtgc tccatggccc tggagtgccg cagccaccct
     2701 cgggaaataa cggcgctggc agattcttga ccattccggc gccgcttgtc agcgaggccg
     2761 ctccgtctct aggaagaccc gagagctgtt cctggatcac cccaggaggg gcaaagtccg
     2821 ggttggcgcg aacggcatgg gtcgtggaaa tggtcgagct tagcgaagtc aaatttggga
     2881 gggccgttgg tttgaccacg cctggcttcg cagtgccgcg actgcgcgac tgcgccggcg
     2941 cgaatggaat tgcgcagacg actagaagca aataaaacgc gcctcgaata agatgcgctt
     3001 taatcgcgga gttaatatcc tgtttcactt tgatcgcgct acggtgaagc aaacagcctt
     3061 ttattcgaag cgcaccgcag atgtcgagac tcttcgttgc tgaggcccat cgcgcgacgg
     3121 aaggcgtttc atcgtgcgtg ccgatgaaag ctgacggcgg ttgttgaact tgaatctgcg
     3181 attcacgcag ggacgatttg gtttgacggg cgcaattgcg cagaatcagt aaaggccgga
     3241 aacatgttcc gcgcgttgct gcgatgtagc catttagcac aactagcagc ggcaagctct
     3301 ggggaggggt cgcagcgccg agttggc
//
LOCUS       DATDAJ010000272        14790 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1530904, whole genome shotgun sequence.
ACCESSION   DATDAJ010000272 DATDAJ010000000
VERSION     DATDAJ010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 14790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14790
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1530904"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VIS53_06770"
     CDS             <1..517
                     /locus_tag="VIS53_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767520.1"
                     /translation="NRNIQFKPTAGLLIPLLLACFAAMFISAPTPAAAGEMVPFNATL
                     SGYVETSEFLPPCTIHGHAIVFGNATHVGVYTGTGELYQDVCNSTFIGSFHWFAANGD
                     EIYGTFAGYLTPTGTPGVFDNHETADATGGTGRFTGATGHWESGGQVDFTTEPISFVT
                     PGQGWINFNRH"
     gene            881..1348
                     /locus_tag="VIS53_06775"
     CDS             881..1348
                     /locus_tag="VIS53_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767521.1"
                     /translation="MKNKQTIFAYVIAGLVTGAFVCAATPAAADCQPTSGTAVAIIGA
                     PSPACPVATVAGDVFDDDDNLIGTTTACLMSATPRGNGALHVRLGHTFSIGTLVFTTE
                     DELVLAPIAPPLYRLNNSLTIVSGASGFLRTHGTVNFATGEVNLRFNGLICTE"
     gene            1846..2409
                     /gene="rplI"
                     /locus_tag="VIS53_06780"
     CDS             1846..2409
                     /gene="rplI"
                     /locus_tag="VIS53_06780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEY5767522.1"
                     /translation="MPLTELILTENVPGLGAEADLVKVRRGYARNYLLPRKMAHEVTP
                     AALRQLNALKQKRAEREGRELNEAQELARRIGKARFVFTLETGETGKAFGSVTAQDIV
                     NRLKNEVGAEIDRHKIVLERPIKDTGEHEVAIKLHHDVTAQLVFQVKSAAEPKAEPTT
                     TTAPEEPDKKKRRIFHRKKDQPKQEEK"
     gene            2410..3900
                     /gene="dnaB"
                     /locus_tag="VIS53_06785"
     CDS             2410..3900
                     /gene="dnaB"
                     /locus_tag="VIS53_06785"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY5767523.1"
                     /translation="MATPPSAWTGEKPRKAGNGAGRGSAARSGEKVVPISPTGSAQDV
                     HRTPPHSVEAEQGVLGSMLISPHETIAECVEKINEEYFYVPAHRTIYDVLVGLWNTRQ
                     GIDLITFTQVLRDRNLLDSVGGAAFVTNLFTFVPTAANVQYYLEIVRDKYILRQIISA
                     ATESVRRAYEEQEEVDSLLDEVEQKIFDVGEDRFKGQMLSMKDHAMQAIETIEKLYER
                     KGSITGISTGFIEFDRMTSGLHPSEMVVIAARPSMGKTALAMNIAEYVAINEKLAVGV
                     FSLEMSSQQLVQRLLCSRARVNLQRVRDGFLGERDFPSLTAAASKLAEAKMFIDDSAS
                     LSILELRAKARRLKAQQDVSLIIVDYLQLLRSTTRRAQDNRQLEISEISAGLKALAKD
                     LKIPVIVVAQLNRQPEQRTGGKPRLSDLRESGSIEQDADLVGLLVRPELYEEDEEARV
                     EKAGEAELIIAKQRNGPVGEIPLTFLKEYTRFETRARNVSEPEEAF"
     gene            complement(3971..5959)
                     /gene="tkt"
                     /locus_tag="VIS53_06790"
     CDS             complement(3971..5959)
                     /gene="tkt"
                     /locus_tag="VIS53_06790"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY5767524.1"
                     /translation="MNLNIEILSKAADQARGLCMDAVEASQSGHLGLPLGCAEIGAVL
                     FGHALRYNPDQPRWINRDIFVLSAGHGSMFLYAWLHISGYDLPMSEIKRFRQLHSKTP
                     GHPEFGETPGVECTTGPLGQGVGNAVGMSVATNMAAARFNTDEHRIFDQHVVCLCGDG
                     DLQEGVASEACALAGVWGLDNLIFIYDSNAVTLDAPAKLTQCEDTGERMKAYGFDVQE
                     IEGQDMRQFLDAFDVAKRRDNGKPQFIIAHTLIGKGIPEVAGTYKAHGEAGAKFVDAA
                     RKALGLPDEHYFVSKDVYDYFAQHKKTLLAEYDRWGQTYDAWRAKNPDKAKLLDDSLA
                     RKVPPDLLSNIPEFPKDAKLATRKAGGEVLQPIAEAMPLLMSGSADLYGSTMNYIKDG
                     GDFSRDNFAGRNVRFGIREHGMCAILNGISYHGLFRASGATFAVFTDYCRGAIRLSAL
                     SKLPNTYIFTHDSIGVGEDGPTHQPVETVSSVRLIPNIDVIRPADPEETAGAFVAAMQ
                     RTDGPTFLALTRQAVPMLNDIDVNLRREGVLRGGYIAKKETGKLDLIILSCGSELQHA
                     LAAAKELGEGIRVVSMPCFERFNRQRQEYREEVLPNACRKRVAIEAGVTEIWYEYVGL
                     DGKVVGLHDFGMSAPGAEVMKERGIDAQHVIEAAKSLR"
     gene            6014..7081
                     /locus_tag="VIS53_06795"
     CDS             6014..7081
                     /locus_tag="VIS53_06795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767525.1"
                     /translation="MNQTTLVKIAERLEGLASKLPEKIRRPVLRELIPLKQLFLQQRR
                     PRFLFVGSSKTPMPEIIDLLFAPDSHEGMNVTLTPVHRWTEWTIPGHGIVSILDARDA
                     GNSAQTQIQDELRREPADVVFFFDDGESNLNEHIDVSPSERKIIGLSLGSLNRVTELE
                     QSLDAQPGVRDRLLTVVRITERQSAETRRLMSLLAAELPNQAKIEMIRISRDRHAQVH
                     VAQMLIKSTTAICAAIGAQPIPLADLPVLTALQVLMVSGIMYISGRERSVRAATEFIA
                     ALGASVGAGMVLREGTRAMLKFFPGWGNVVCGMVAGAGTYAIGRAATAYFLEGASLKE
                     AKQTYLKSRRKGSRRALPSHE"
     gene            7243..8646
                     /gene="rsmA"
                     /locus_tag="VIS53_06800"
     CDS             7243..8646
                     /gene="rsmA"
                     /locus_tag="VIS53_06800"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEY5767526.1"
                     /translation="MKLSEIRATLKEIGVAPVKSLGQNFLHDQNLARWIVDQAQITAE
                     DYVVEIGPGLGALTRFLLEKGAQVLAIEKDARLAKFLRSRFGDERLEIVNTDALKFDP
                     RILFAHHCVKLIGNLPYNISSPLLVKFLDQPSPISLCVLTLQKEMAMRLSASPCTHDY
                     GALTLRVQLHHRVKYLRSLPATVFLPQPDVDSAVVRLEPRDPIELPEHDDELLLKLIR
                     IGFSQRRKQLRKLLREYVRDWNALASCLNIDPKVRAEELSLLQWIALANCIAPPPCQG
                     TDATLNEQFPVVDENDEIQSHAARSEVHGNNLRHRAVHILIFNQDGDVYLQQRSRWKD
                     RHPLKWDSSAAGHVTAGENYDETARRELKEELGVDVLLERIFRLTASSCTDQEFIWGY
                     RGVISGDLVPNKSEIERGVFFAPTVVDGWTSARPDDFAPAFLECWKAYRRKMNPKREE
                     STRPETFSVANGAASTA"
     gene            complement(8874..9668)
                     /locus_tag="VIS53_06805"
     CDS             complement(8874..9668)
                     /locus_tag="VIS53_06805"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY5767527.1"
                     /translation="MSIITLRSGRLLWRSVICLLVLRGINTFAEGVPDDCTQLILGTA
                     PTWNSMRGELRLLERPRGGDWKAVAGPFPVLFGKNGLAWGTGLAGQNESGLRKKERDG
                     RAPAGIFEIGQVFGYDAHLPAGADYPYHQVTDADLWSDDPRSPNYNRHIVIDPKNPPD
                     NYTHERMRSGDFAYHWLVEIRHNSDPPVPGAGSAIFFHIRRGVNRATTGCTTMAQDNL
                     VKMITWLRAKRHPCYALLPAGEYEKGWRAWNLPSPDALQGAASLAR"
     gene            9788..10717
                     /locus_tag="VIS53_06810"
     CDS             9788..10717
                     /locus_tag="VIS53_06810"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY5767528.1"
                     /translation="MKTLFLLRGIMAILGMAVASTFAQTQSTTSSTSYIQTSKFIGRP
                     VKSAQGDEIGTVKDIVLDRNTGCLAYTVLSTTGGGGGGTRVSGGGKMVAVPWAVYSPS
                     SDPNVLTVTVERDRIYSAPVFDYARIEEYSRPDYINNVYSYYGVSPGVGVGVGVSGGT
                     STTTTGQTTTTGATTTTGAATGSNTTSGAAASPAAGASVAGSAAPGTTEGRRAHPGAA
                     AAAGAAAVKARETATPSLSERAGERTPSAKQKQAKPTPPSSRSETGTRSESAPKTEGA
                     PAEGAATGEKTKGSTRERSRSREATSPPERPQE"
     gene            complement(10804..12108)
                     /locus_tag="VIS53_06815"
     CDS             complement(10804..12108)
                     /locus_tag="VIS53_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5767529.1"
                     /translation="MIYNRREANCNRQLLMQAAGIKPLSGARSALFLLLAINLFNYID
                     RQILAALEPDIRTTFFAADDVHAMTKTGLLGDAFFVTYMISAPILGLLADRFSRWIIV
                     GSAVILWSLASGASGLAATFGILFATRIFVGIGEGGYGPAAPTILSDLFPIETRGRIM
                     AIFYAAIPVGSALGYVIGGLIGAHLGWRWAFYLVAPPGLLLGLLCFWQRDPRVAANNL
                     EQKSPRRSVRDYLNLFRTRSYLINCIAMTLMTFVTGGLGFWVPAYLRYRDQSPAAGMT
                     IFGLITVVAGLVSTLLGGMIADRLRSRVAGSYFLVSGIGMLIACPFFVATLYIPFPAA
                     WITMFLAIFCLFLNTGPSNTALANVSLPAVRATAFAANIFVIHAFGDVQAFWLLGYIG
                     GHANMHMAFLFVSAIILASGVTWLFGVKYLPADTAAVEGRTT"
     gene            12265..14490
                     /locus_tag="VIS53_06820"
     CDS             12265..14490
                     /locus_tag="VIS53_06820"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5767530.1"
                     /translation="MTHTMAFKMSAAERMLYFFGRPLVRCFYRVTALGLENLPAGGFL
                     LVPNHISWVDALILQLACPRRIRYVIDQEYYHKRLLHPILRAIGCIPISKRQSHAAVR
                     AAAEKIAEGEIVCVFPEGELERRGTLLRLQRGYEVIARHAKAQVVPVWLDQLWGSIFS
                     FQGGKFFRKFPKRIRYPVTVAFGEPLEAKAADVATVREELLKLGEFCFSRRPSLDRHL
                     AEDCVRGLKRRPFATAVVDGIDHTQLSRGKLLGAAAAFSRYLRKEFPDERIAIVLPAS
                     KGSMVANLAVMLANKVPVDLNFTIGRAANESCCRRANLRIAISATPFIERIKDFPWPD
                     RVLKLDELLPGMKRQIILWWIMSTILPAHLLLRLLNVPEKGGHAEAVLLFTSGTTGEP
                     KGAVMSHRNVLGNVSQFRELLDAKKTDAILASLPFFHTFGSTVTLWYPLIEGVRIVTY
                     PNPLDAAKCAALIARYKLTFLLLTPTFLRLYLRKAEPEQLNTLRLIITGAEKLPLELA
                     SHFEERFHKKVFEGYGLTETAPVVSVNLPDPELPKSSDHVQPSSRVGSVGRLAPGIAA
                     EIREPETDQKISLYNSGMLWLRGVNIFEGYLHDPERTAEVLHDGWLKTGDIGRFDEDG
                     FLYIEGRLSRFSKIGGEMVPHEAIEHKIIDLMGLAGRDERPLAIIGVQDEAKGEALVL
                     LSAVDMEIAELRKKLQEAGVPNLWIPKHLQRVETIPVLASGKLDLKRCQECAAANAGP
                     P"
BASE COUNT         3486 a         4048 c         4152 g         3104 t
ORIGIN      
        1 aaatcgaaac attcagttca aaccaacagc aggacttctg atcccgctgc tgctcgcctg
       61 ctttgcggca atgtttatct cggcacccac tccggcagca gccggcgaga tggtgccgtt
      121 caacgccact ctctcggggt acgttgaaac ttcggagttt ctgcccccgt gcactatcca
      181 cggacacgcg atcgttttcg gaaacgcgac ccatgtggga gtgtacaccg ggaccggaga
      241 attgtaccaa gacgtctgca atagtacatt cattggcagc tttcactggt ttgcggccaa
      301 cggcgacgaa atctatggca ctttcgcggg gtacctgacc ccgacgggaa cgcctggagt
      361 gttcgacaac catgaaactg ctgacgcgac aggcggcaca ggtcgcttca ccggcgccac
      421 cggccattgg gaatcgggcg ggcaagtcga cttcaccacg gagccgatat cttttgttac
      481 ccccgggcag gggtggatca attttaatcg gcactgatga gggggtagac atagtgcgcc
      541 tgatttgcgc atcgcagcta gtttgtctag ttgcgatgcg ctagatcgac gaagaaacct
      601 gctccttcct cattcggcaa gcggcgtcgg atcgccgcaa cgcaagacag cgccattcgt
      661 actgattcgt tctcgagtga ctgagcggaa cacataccgg cggccggcgc ggtaggcagc
      721 accggttcag actttctttg caacgcggcg caaactttcg ggaaggaatg ggaaacggtc
      781 tgcgtttccg gatcaccagg aacgacggcc acaaacccaa aacaagaaaa ggaaaaggtg
      841 aagtgaacca actcaccaaa acgaaagaaa aaaccaaaac atgaaaaaca aacaaacaat
      901 atttgcttat gttattgccg gtttagtgac gggagcgttt gtctgcgcgg ccacgcccgc
      961 agcagctgac tgtcagccga catcgggaac cgcggtcgca ataatagggg ccccgagtcc
     1021 agcctgcccg gtggcgacgg tcgccggtga cgtgttcgat gacgatgaca acctgattgg
     1081 cacgaccacc gcctgcctga tgtcagcaac accccgtggc aacggcgcgc tgcatgtaag
     1141 gttgggccat accttcagca tcggcaccct ggtcttcacc accgaggatg aattggtctt
     1201 ggctcccatc gcgccgccgc tgtaccggct aaataacagt ctaacgatcg tctccggcgc
     1261 gtcggggttt ttgcgcactc atggcacggt taattttgcc accggcgaag tcaacctcag
     1321 gttcaacggg ctgatctgca ctgagtgagc ctcacttacc gttcaacaaa tagacattgt
     1381 gctccgtatc tgcgcatcgc agctggcatt tgtccagttg cgatgcgcta gatcgaggaa
     1441 gagaccttcg ctttttccag ttgggtgaga ggcgcggcta ccaaaagcac gccgtgctag
     1501 tcgatactga ttgcgaagcg ggtcgaatga agctcggcat gatccagggt atcattaaca
     1561 ccggacttta gtccggtgcg caacgacacc agtgctaaag ctgtttcaac agcttaattc
     1621 gccgcgcgca gaagtaagcc gttgaaacgg ctacgctcgg aatcagacgt gttccaccgg
     1681 cttgaaagcc ggtgttaatc aaacgcagca ctgagaacat cacacggaat aaatgatttt
     1741 atttcagtcg tgcattgaca gtacgtgcgg cggttttata gtcgtccgcc ccggacataa
     1801 ttcgcgattg aaaattttgc gacgcatttt agaaaagaca tcagcatgcc attgactgaa
     1861 ctcatcctaa ccgaaaatgt cccggggctt ggcgccgagg cggacttggt caaggtgcgt
     1921 cgcggttatg cgcgcaatta tcttctgccg cgcaaaatgg cgcacgaagt tacaccggcg
     1981 gctttgcgcc agcttaatgc gcttaagcaa aagcgcgctg aacgcgaagg acgcgagttg
     2041 aacgaggcgc aagagctcgc gcgtcgcatc ggcaaggcgc ggtttgtttt cacattggag
     2101 accggcgaga caggcaaagc ttttggatca gtgacggcac aggacatcgt gaaccggctg
     2161 aaaaacgaag tcggcgcaga gatcgatcga cacaaaattg ttctggagcg accgatcaag
     2221 gacactggcg agcacgaggt cgccatcaaa ctgcatcacg atgtgaccgc gcaacttgtt
     2281 tttcaggtga aatcggcagc agaaccaaag gctgagccga cgactaccac tgcgccggaa
     2341 gaacctgaca aaaagaaacg tcgaattttc cacaggaaaa aagaccagcc aaaacaagaa
     2401 gagaaataaa tggcgactcc accgtccgca tggacaggag agaagcctcg caaagcggga
     2461 aatggcgctg gccgaggttc ggcagcgcga agtggcgaaa aagttgttcc catttcgcca
     2521 acaggttctg cgcaggatgt tcaccgaacg ccgccgcata gcgttgaagc agagcagggc
     2581 gttctcggtt caatgctcat ctccccgcat gaaacgatcg cggaatgcgt cgagaaaatt
     2641 aacgaagaat atttctacgt ccccgcgcac cgaaccatct acgacgtcct tgtcggtctt
     2701 tggaacacca gacaaggcat tgacctgatc acgttcacac aggtgctccg cgatcggaac
     2761 ctcctggata gcgtcggcgg tgcggcattc gtcacgaacc tgttcacgtt cgttccgacc
     2821 gccgcgaacg tgcagtacta tctggagatc gttcgcgaca aatacattct gcgacagatc
     2881 atttccgccg ccaccgagag tgtccgtcgc gcgtacgaag agcaggagga ggtcgacagt
     2941 ctgctggacg aagtggaaca gaagatattc gacgtcggcg aagaccggtt caaaggccag
     3001 atgctctcga tgaaagatca cgcgatgcaa gcgatcgaga cgatcgagaa gctctacgaa
     3061 cgcaaaggta gcatcaccgg gatctcaaca ggtttcatcg agttcgatcg tatgaccagc
     3121 ggtctgcatc cttccgaaat ggtcgtgatt gcagcgcgtc ccagcatggg aaaaacggcg
     3181 ctcgccatga acattgccga atatgtggcg atcaacgaaa agctggccgt cggcgtgttc
     3241 agcttggaaa tgagcagcca gcaactggtg caacgactgc tttgctcccg agcacgcgta
     3301 aacttgcaaa gggtgcgcga cggttttttg ggcgagcgcg attttccgag cctgacggct
     3361 gcagcgtcaa aattggcgga ggccaagatg ttcatcgatg acagcgccag cctcagcatt
     3421 ctggaactgc gggcaaaagc gcgccggctg aaggcgcagc aggatgtgag cctcattatc
     3481 gtggattatt tgcaattgct caggtcaact acgcggcgcg cgcaggataa ccgccagctc
     3541 gaaatctcgg aaatttctgc cgggctcaaa gcgttagcca aagatttgaa aattcctgtc
     3601 attgttgtgg cacaattgaa ccggcaacca gaacagcgca ccggcgggaa accgcgtttg
     3661 agcgatctcc gggaatcggg atccatcgag caggatgcgg accttgtcgg cttactcgtt
     3721 aggcctgagc tgtacgagga agatgaggaa gcgcgtgtgg agaaggcggg tgaagcggag
     3781 ttgattatcg ccaagcagcg gaacggcccc gtcggcgaaa ttccgctaac gttcctgaag
     3841 gaatacacac gattcgaaac tcgcgctcgc aacgtgagcg aaccagaaga agcgttctag
     3901 ggtaggggcg gttcacctga accgccctgc tgtcatcgca tcccgagcag gcgattgagg
     3961 tcaatcgcct ctacctcagc gatttcgcag cttcaatcac gtgctgagcg tcgatgccgc
     4021 gttccttcat cacttcggcg ccgggcgcgc tcatgccgaa gtcgtgcagt ccgaccactt
     4081 ttccgtcgag cccgacatat tcgtaccaaa tctcagtcac gccggcttcg attgcgaccc
     4141 gttttcgaca ggcgttaggc aacacttctt cacggtattc ctgccgctgg cggttgaacc
     4201 tttcaaagca cggcatggaa acaacgcgga tgccctcgcc caactctttc gctgcggcga
     4261 gcgcgtgctg taattcgctg ccgcatgaga ggatgatcaa gtcgagtttg ccggtttctt
     4321 ttttcgcgat gtaaccgccg cgcagcactc cttcacgacg cagatttaca tcgatgtcgt
     4381 tcaacatcgg aacagcctga cgtgtcaggg cgaggaaagt cggaccgtcc gttcgctgca
     4441 tcgcggcaac gaatgcgccc gcggtctctt ccggatcagc cggccgaatc acgtcgatat
     4501 tcgggatcaa acgaaccgag ctgactgtct ccacgggttg atgcgtcgga ccgtcttcgc
     4561 ctacaccgat cgaatcgtgt gtgaaaatgt aagtgttcgg caacttcgat aatgcgctga
     4621 gccgaatcgc accgcggcaa taatcggtaa acaccgcgaa cgtcgcgccc gacgcgcgaa
     4681 acaacccgtg gtacgagatg ccgttgagga tcgcacacat gccgtgctcc cgaatgccaa
     4741 aacggacgtt cctcccggcg aaattgtcgc gtgagaaatc gccaccgtcc ttgatgtaat
     4801 tcattgtcga tccgtacaga tcggcgctgc cactcatcag caacggcatt gcctccgcaa
     4861 tcggctgcaa cacttcgccg cccgccttgc gggtcgccag tttcgcgtct ttcggaaact
     4921 ccgggatgtt cgacaagaga tcgggcggca cttttcgtgc gagactgtca tcgagcagct
     4981 tcgctttgtc gggattcttc gcgcgccacg catcgtaggt ttgtccccag cgatcatact
     5041 cagcgagcag tgtctttttg tgttgcgcga aatagtcgta cacatctttc gacacgaaat
     5101 aatgctcgtc cggcaagccg agcgccttgc gggctgcatc gacgaatttc gcgcccgctt
     5161 cgccgtgcgc cttatatgtg cccgcgactt cgggaatgcc ttttccgatc agcgtatgcg
     5221 cgataatgaa ctgcggtttg ccattgtcgc ggcgtttcgc gacgtcgaat gcgtcgagaa
     5281 actgtcgcat gtcctggccc tcgatttcct ggacgtcaaa gccgtacgcc ttcatgcgct
     5341 cgcctgtgtc ctcgcactgc gttagctttg ccggggcatc cagcgtaacg gcattggaat
     5401 cgtaaataaa aattagattg tcgaggcccc aaacgcccgc gagcgcgcac gcctcggatg
     5461 cgacgccctc ctgcagatcg ccgtcaccgc acaagcacac cacgtgctgg tcgaagattc
     5521 tgtgctcatc cgtgttgaag cgcgccgcag ccatgttcgt tgccacggac atgccaaccg
     5581 cgttgcccac gccctgaccg agcggtccgg tggtgcattc cactccgggc gtctcgccaa
     5641 attcgggatg ccctggcgtt ttggaatgta gttgccggaa gcgtttgatt tccgacatcg
     5701 gcaaatcgta gccgcttatg tgcagccagg cgtaaaggaa catgctgccg tgcccggcgg
     5761 agagcacgaa gatatcgcga ttgatccaac gaggctgatc gggattatat cttaacgcat
     5821 gaccaaaaag caccgcgccg atttcagcac aaccgagcgg aagcccgaga tgccctgatt
     5881 gcgaggcttc cacagcgtcc atgcacaacc cgcgcgcctg atccgctgct ttcgaaagta
     5941 tttcgatgtt caaattcatg ctaggcttat aatcgcaggg cacgcatccg tcattcggat
     6001 ttcattttca gcaatgaatc aaactactct cgttaaaatt gccgagcgac tggaaggttt
     6061 ggcatccaaa cttcccgaaa aaattcggcg gccggtgctg cgtgaattga taccgctaaa
     6121 gcaattattc ctgcagcagc ggcgaccgcg atttctcttc gtcggatcga gcaaaacgcc
     6181 gatgcccgaa atcatcgacc tgctttttgc gccggattcg cacgagggca tgaatgtgac
     6241 actcacgccg gtgcatcgtt ggaccgagtg gacaattccc ggtcacggaa tcgtctcgat
     6301 tctggacgca cgcgacgccg gtaattctgc gcaaacgcaa attcaagatg agctcaggcg
     6361 cgaacctgcc gatgtcgttt tcttttttga cgacggcgaa tcgaatctga atgagcacat
     6421 cgacgtctcg ccgagcgaga ggaaaatcat tggcctttcg ctggggtctt tgaaccgagt
     6481 gacggaattg gaacagtcgc tcgatgcgca accgggtgtt cgcgatcgtt tgctcaccgt
     6541 agttcgcatc acggaaaggc aatccgcgga aacgcggcgg ctgatgtcgc tgcttgcggc
     6601 cgagttgccg aatcaggcga agatcgagat gatccgcatc tcgcgcgatc gccacgcgca
     6661 ggttcatgtc gcgcaaatgt tgataaaatc tacgaccgcg atctgcgccg caattggcgc
     6721 gcaaccgatt ccgttggcag acctgccggt tctcacggcg ctgcaagtgt tgatggtctc
     6781 cggaatcatg tacatcagcg gcagggaacg aagcgtgcgg gctgcgactg agttcatcgc
     6841 cgcactcgga gcaagcgtcg gcgcgggcat ggttcttcgc gagggtacgc gcgcgatgct
     6901 gaagtttttc ccgggatggg gcaacgtggt ttgcggaatg gtcgcaggcg cgggcacgta
     6961 cgcgattggt cgcgccgcca cggcttactt tcttgaagga gcttccctga aagaggcgaa
     7021 acaaacgtac ctaaagagcc gaagaaaagg gtcgcgtcgc gcgctgccat cgcatgaata
     7081 ggacgccatc gtcggcggtc gaattcggca cattcggccc cgcaagaaac gggcgtgaat
     7141 aacttgtgaa caagtttgtc gtttcggcgc attttgttca caggattttg tgaacaggct
     7201 tgcgagtttc ccttgctgcc tcgtgcggta cggaccgcag ctatgaagct ttcagaaata
     7261 cgcgcgacgc tcaaagaaat cggcgttgcc ccggtcaaat ctctcggcca aaactttctg
     7321 catgatcaaa acctcgctcg ttggattgtc gatcaggcgc aaatcactgc ggaagattat
     7381 gtggtcgaga tcgggcccgg tttaggcgcg ctgaccagat ttcttttgga aaaaggagcg
     7441 caagttctgg cgatcgaaaa agatgcgcga cttgcaaagt ttttgcgttc gcgcttcggc
     7501 gatgagcgac ttgaaatcgt taacactgat gcgctgaagt tcgatccacg cattttgttc
     7561 gcgcatcact gcgtgaagtt gattgggaat ctgccgtaca acatttcgag tccgttactc
     7621 gtgaaattcc tcgaccaacc aagtcctatc tctttgtgtg tgttgacatt acagaaggaa
     7681 atggctatgc gactttccgc gtcaccatgt acgcatgatt acggagcatt gacgttgcgc
     7741 gttcagttgc atcatcgcgt aaaatatctg cgcagccttc ctgcaactgt ttttctaccg
     7801 caacctgatg tcgattccgc agtggtgcga ctcgagccgc gcgatcccat tgaattgccg
     7861 gagcacgacg atgagttgct tttaaaattg atccgcatcg gattttctca gagacgaaaa
     7921 cagctcagaa aattgctgcg agaatacgtt cgcgactgga acgcgctagc gagctgtctg
     7981 aacatcgatc cgaaagtacg agcggaggaa ttatctttgc tgcaatggat tgctcttgcg
     8041 aattgcatcg cgccacctcc gtgccagggg acggacgcta cccttaacga gcagttcccg
     8101 gtggtcgatg aaaatgatga gattcagagt cacgccgccc gatctgaagt gcatgggaat
     8161 aacttgcgtc atcgcgccgt tcacatcctc attttcaatc aggacgggga tgtgtatttg
     8221 cagcaaaggt cccgctggaa agatcggcat ccgttgaaat gggactcgag cgctgctggc
     8281 catgtgactg ccggagaaaa ttatgatgaa acagcgcggc gcgagctaaa ggaggagtta
     8341 ggcgttgacg tcctgcttga aagaattttt agactcaccg cttcatcgtg caccgaccag
     8401 gagtttatct ggggttaccg cggcgtgatt tccggagatc ttgtccctaa caagtctgaa
     8461 attgagagag gcgtgttttt tgcgccgacc gtggttgatg gctggacgtc ggccagaccc
     8521 gacgatttcg cgcccgcatt tctagaatgc tggaaagcgt accgccggaa aatgaatccc
     8581 aagcgcgaag agtctacccg cccagaaact ttctccgtgg caaacggcgc agcatcgact
     8641 gcttgaactt tcgggcagcg cgtcgtgcgg cttgttttcc accaaacacg ttgtcgctga
     8701 acatcctcgt caccacacga tcgccgcgga ggaagtggac ctgaaagcca tgtgtctgct
     8761 tcttcgcgcg cggtttcgtg tcgatacggc ggatattttc ttccgattga ggattgggac
     8821 gttttcgtcg tggcataatg actaacaaca agctaacaag tcattgcgag atttcaacga
     8881 gccaatgaag cggcgccctg cagcgcgtcc ggcgaaggca gattccaggc gcgccatcct
     8941 ttttcgtact ctcccgcggg cagcaaggca tagcacggat gtcgcttcgc tcgcaaccag
     9001 gtaatcattt ttacgaggtt atcctgtgcc attgtggtgc agccggtggt cgctctattc
     9061 actcctcgcc ggatgtgaaa aaagattgcg ctacccgctc cgggcacagg cggatcggaa
     9121 ttgtgccgga tctcgaccag ccagtgatag gcaaaatctc ccgaacgcat tctttcgtga
     9181 gtgtaattgt ccggcggatt cttcggatca attacgatgt ggcgattgta atttggcgac
     9241 cgcggatcat cgctccaaag gtctgcgtcg gtgacttgat gatacggata gtcggcccca
     9301 gccggcaggt gagcgtcgta tccaaagacc tgtccgatct cgaaaattcc cgcgggcgcc
     9361 cggccgtctc gttctttttt gcgaaggcct gactcgtttt gacctgcgag ccctgttccc
     9421 cacgcgagac cgttcttgcc gaacaacacg ggaaatggtc cggcgacagc tttccaatca
     9481 ccgccgcgcg ggcgctccaa taatcgcagc tcgccgcgca tcgaattcca cgtcggtgcg
     9541 gttcccagga tgagctgtgt gcagtcgtcg ggaacgcctt cggcgaatgt attgatgccg
     9601 cggagcacca acaggcaaat cacggatctc cacaagagtc gtcctgaccg gagcgtaatg
     9661 atcgacatat tttgtaaaat cagatcaatt tagctgttac gcgatctctt tccacatccg
     9721 ctgcaacggt gcgcaacgat tcttgtttgt cggctctcaa taagtagagc ccaaacctgt
     9781 tacgcttatg aaaacattat tcttactccg aggcatcatg gccattttgg ggatggccgt
     9841 ggcttctaca ttcgcccaaa cccaaagcac taccagcagc accagttaca ttcagacgag
     9901 caagttcatt gggaggccgg ttaagtcagc ccaaggcgat gaaatcggca cggtcaagga
     9961 catcgtgctc gaccgcaata cagggtgctt ggcgtacact gtcctttcca cgactggcgg
    10021 aggcggcggc ggtacgcggg tcagtggagg cggcaaaatg gttgctgtcc cgtgggctgt
    10081 ctactcgccg tcaagcgatc cgaacgttct cacagtaact gtcgaaagag atcgcatcta
    10141 tagcgcgcca gtattcgatt acgctcgcat cgaagaatat tcccgacctg attatatcaa
    10201 taatgtgtat agctattatg gggtaagccc gggcgtggga gtcggggttg gagtttccgg
    10261 cggaacttca acgaccacaa ccggccaaac cacgacaacg ggtgcgacca caacgactgg
    10321 cgcggcaaca ggttcgaaca caacgtcagg cgcggcagca agccccgcgg caggtgcatc
    10381 ggtggcagga tcagcggctc ccggcaccac agaagggcgg agagcacacc ctggtgcggc
    10441 cgcggctgcg ggcgcagcgg cggtcaaggc gcgtgaaaca gctacgccga gcctttccga
    10501 gcgagccggt gaacgaacgc cgagtgcgaa acaaaagcag gcaaagccaa ctccgccaag
    10561 tagtcgcagc gaaaccggaa cgcgatctga aagtgcgccc aaaactgagg gagctccagc
    10621 tgaaggagcg gccacgggcg agaaaacaaa gggatcaact cgggagcggt cacgaagtcg
    10681 cgaagccacg agtccaccgg aacgaccaca ggaataacca atttggactg acggtttcga
    10741 taaaaactaa agcaaatcag cccggcacct gagcgccggg cttttttgca cccacaatgg
    10801 aagctatgtc gttctgcctt ctacggcggc ggtatcggct gggagatatt tcacgccaaa
    10861 aagccatgtg acacccgacg cgagaataat tgcggacaca aacagaaacg ccatatgcat
    10921 gttcgcgtgt ccgccaatgt aaccgagcaa ccaaaaggcc tgcacatccc cgaacgcatg
    10981 gatcacaaaa atgtttgcag caaacgccgt tgcgcggacg gccggcagcg aaacattcgc
    11041 gagagcagtg tttgacggtc cggtattcaa aaacaggcaa aagattgcca aaaacattgt
    11101 gatccaggca gcgggaaacg ggatgtaaag ggtcgcaacg aaaaacggac acgcgatgag
    11161 cattccaatt cctgagacca agaagtagga gccggcgaca cgcgagcgca atcgatcggc
    11221 aatcattcct cccagtagcg tcgagaccag gcctgcgact accgtgatca ggccaaagat
    11281 cgtcattccg gcggcgggac tttgatcgcg ataacgcaaa tacgccggta cccagaaacc
    11341 caaaccgcct gttacaaaag tcatcaatgt catcgcgatg cagttgatga gataagaacg
    11401 tgtgcggaac aggttcaggt agtcgcgtac gctgcggcgt ggtgattttt gttccagatt
    11461 atttgctgcg acgcggggat cgcgttgcca gaaacacaaa agtccaagca acaaacccgg
    11521 cggtgccact agataaaatg cccaacgcca acccaagtga gcaccgatca agcccccgat
    11581 cacatagccc agcgcgctgc caactgggat cgctgcgtaa aagatcgcca tgatgcgacc
    11641 tcgcgtttca atcgggaaga gatcggacaa aatcgttggc gccgccgggc cgtaaccgcc
    11701 ttcgccaatt ccaacaaaga tgcgagtagc gaacaatatc ccgaacgtcg cggctagacc
    11761 tgacgcgccg ctggccagac tccacaaaat aacggcagag ccgacgatga tccagcgcga
    11821 gaatcggtcg gccagcaaac ccagaatcgg agcgctgatc atgtaagtca cgaaaaaggc
    11881 gtcaccgagc aggccggtct tggtcatggc gtgtacgtcg tcagctgcga aaaaagtcgt
    11941 gcgaatatca ggttcgagcg cagccaggat ttgccggtcg atgtaattga aaagattaat
    12001 ggccaggagc agaaagagtg cgcttcgcgc gccgctgagc ggctttatcc ctgcagcttg
    12061 catcaacaat tgccgattgc agtttgcctc gcgccgattg taaatcataa accatggagc
    12121 gaacccggct cttaaatagc gctgtcatgt tgagcgaagc gctgcaacga aatgcgaagc
    12181 atgaggccag gctttcaaac atctctgatt tgtttccgtc gagatcggtg cagaaatgtc
    12241 gagagattct tcgcttcgct cagaatgaca catacgatgg ctttcaaaat gtccgctgct
    12301 gaacgcatgc tctatttctt tggacgaccg ctggtgcgct gcttttatcg ggtcactgcg
    12361 ctaggtctgg aaaaccttcc ggccggcggc tttctcctcg tgccgaatca tatcagctgg
    12421 gtagacgccc tcattctgca gctcgcctgc ccacggcgga tccgctacgt catcgaccag
    12481 gaatattatc acaagcggct gttgcatccg attctgcgcg cgattggttg tatcccgatc
    12541 agcaagcgcc agtcgcatgc tgcagttcgc gccgctgcgg aaaaaatcgc cgaaggcgaa
    12601 attgtgtgtg tgtttccgga aggcgagttg gaacgaaggg gtacgctctt gcgcttgcag
    12661 cgcggttatg aagtgattgc gcggcacgcg aaggctcagg tcgttccggt ttggctcgat
    12721 caactctggg gatcgatctt ttcatttcaa ggcgggaaat ttttcaggaa gttcccaaag
    12781 cgaatccggt acccggttac cgtcgccttt ggagaaccgc tcgaggcaaa agcagccgat
    12841 gtcgcgaccg tgcgcgagga gttgctcaag ctgggcgaat tctgtttcag tcgccggccg
    12901 tcattggatc ggcatcttgc cgaagactgc gtgcgcgggt tgaagcgcag accattcgcc
    12961 acagcggtgg tcgacggaat tgatcacacg caactgagcc gcggaaaatt gctcggcgca
    13021 gccgcagcgt tcagccgtta tttgcgaaag gaatttcctg acgaacgaat cgcgatcgtt
    13081 ttgcccgcga gcaagggatc gatggttgcc aatttggccg tgatgctggc gaacaaagtc
    13141 ccggtggacc taaatttcac aataggacgt gcggctaatg aatcctgctg caggcgagcc
    13201 aatttgcgga ttgcaatctc tgcgacccca ttcatcgaac gcatcaaaga ttttccatgg
    13261 ccggaccgcg ttttgaagct ggatgagctg ctcccgggta tgaagcgcca aattattctt
    13321 tggtggatca tgtcgacgat cttacccgcg catttgcttt tgcggttact gaacgtcccg
    13381 gaaaagggcg ggcacgccga agcagtgttg ctttttacca gcggaacgac cggcgaaccc
    13441 aaaggcgcag taatgagtca ccgcaacgtc ctgggaaatg tctcgcaatt ccgggaactg
    13501 cttgatgcaa aaaaaacgga cgcgatcctc gcgtcgctgc ctttctttca cacgttcggc
    13561 tcgacagtca cactttggta tccgctcatc gaaggtgtgc gcatcgttac atatcccaat
    13621 ccattagatg cggccaaatg cgcggcacta atcgcccgat acaagctgac gttcctgttg
    13681 ctgacgccca ccttcctgcg gctgtatctg cgcaaggccg aaccggagca gcttaacact
    13741 ttgcgcctca tcatcaccgg agccgaaaag ttgccgctgg aacttgcgag ccattttgaa
    13801 gaacgtttcc acaaaaaggt cttcgaaggc tacgggctta ccgagactgc gccggtggtg
    13861 agcgtaaatc tgcctgatcc tgaactgccc aagtcgagcg atcacgtgca gccgtcgagc
    13921 cgtgtgggat ctgttggaag attggcgccg ggcatcgccg ccgagatccg tgaaccggaa
    13981 actgatcaga aaatttcgtt gtacaacagc gggatgcttt ggctacgcgg cgtcaacatt
    14041 ttcgaaggct atctgcacga cccggagcga accgcagaag ttctgcatga cggctggttg
    14101 aagacggggg acatcggccg gttcgacgaa gacggtttcc tttatatcga agggcggctc
    14161 tcgcgatttt caaagatcgg cggcgaaatg gtgccgcatg aagcgattga acacaaaata
    14221 atcgatctaa tgggactagc cggaagagac gaacgtcccc tcgctattat aggcgtgcag
    14281 gacgaggcca agggcgaagc gctcgtgctc cttagcgctg tggatatgga gatcgcggag
    14341 ttgcgcaaga aattgcagga agcaggtgtg ccgaacttgt ggatcccaaa acacctccag
    14401 cgcgtggaaa caatcccagt tcttgcttcc ggcaagctcg atttgaaaag gtgccaggaa
    14461 tgcgcggctg cgaacgccgg cccaccttga cggactgaac catcgcactg gtcaataatt
    14521 gtaggacctc tgtgcctgtc acgccgtagc ttttagcgaa ggctgggtca gacgccagca
    14581 acgatataca tctagggacg ccgtgtgcat tgcggaacag ggaaggggaa ttgatggagg
    14641 aacaaggcgg aatcacgcga cgcaaaacga tcagcggact cgtgtcaccg gcttcgcttc
    14701 gcttcaagat tcgaccgatt cgccgcgcga gaaaaagagg agcttatgac aacgaagaaa
    14761 ttagaagatc caaaagcaaa atatccgaac
//
LOCUS       DATDAJ010000273         7045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1534176, whole genome shotgun sequence.
ACCESSION   DATDAJ010000273 DATDAJ010000000
VERSION     DATDAJ010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7045
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1534176"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..3668
                     /locus_tag="VIS53_06825"
     CDS             <1..3668
                     /locus_tag="VIS53_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767531.1"
                     /translation="TAVFAAACFLAATRCYATGGDSYEYPAKLSETLAILPGKSLGEI
                     FLETSAIKPPTKSWDSAKLRELADRIGKEPLSHLLKTADDLIALARASYTPGSDSCNL
                     AHDVRDTVAVSGENPNAAREYILERLGGNLSGGELDQRAESARGAIKANWLYLCGAQR
                     FAGGDRDECQDWFNRVVKEFPKGPRAEMAMFMSARCAFSATRKLQEAAENEEILANAR
                     KMAIGKFETLRKRYPHGRFDADALGWLGALAYDSNDYLKALDYYIAQAETPGHPETLM
                     SAIYNCEKTLAHLAPKPGGDAAFALIARHPRIAMAFTYLVLASPEADNYDGKWDNPAD
                     VRKWRRTILPRIAAAVAKQKDRYKSTDWQPRYLAMLVHASSASGNHAQALQLSQISPD
                     QLSQSDDLLFARAITLQRASKTNEAIDVFQTFLNTFPKSRMTPGVKVRLALALADNHQ
                     AGDAIATLRDLLATASPNYEKPTRAAEESTDEDNSASSDEDESADEDNSASSEEDETT
                     DEDEAEPNPGNGNSDENNSESESGATGHGQLDKFPIAARLYMSNSEGHPTGEVHWNAA
                     DSAVYDNISGADEEQIYQFIDTLLNFAPLPELLTTPEDKNLDDAGKRKVRAILAERYL
                     AAENFAEAKKYIVDPHKQQVVNQLEQLTNDKNGTPQQKAERMLKLGDTWAEARGLLLR
                     APLDTDLHEEAPVSGLLRRENGHTLGLPNVEDQLDDRDELHHASRWWMRAARALPGTP
                     LSAKARLKALEALPQIARFSLYAEQRAREIKLEAVSREIYDKLRAESPNSPEAQRFAA
                     YWSLPPEQKKSEETSDDLSTQSDQTAVVECDDSAAPLGYPISDKNAFGALTRKNLSGS
                     SEEQERPYQVWNDVDRRVKELRQTADAAEVKDLQQLVRKNISGREDVTLANCLDDLAQ
                     FLAEPNLPDEAARVAYVNLRLDLLHRTHWPDSPVDPDISVQDSDDAVAAEIDEVEKNP
                     ALQSFHDYLEFCRIGLVAGKRIEVKTDIPGGKELDGVTYYSRDFPKIEKMTRDFLAKY
                     PRSHKREAAMFVLARAIYSLSCPYILCDTAAPSGSEEYRLVDVVQKTLRVEPFDPKRV
                     MQALDDYDREFPHGRYAGDVRDMRAATFWRMGDWAKALDLTLAQIGDRVSGDLLGDAE
                     TRLANIFAELANVEHRPQVLAAIRAHPDCIPYLAAYVGAATTDRAHPLRYLQSYLSDQ
                     LHFKIPATPPVEPVAAN"
     gene            complement(3622..5826)
                     /gene="recQ"
                     /locus_tag="VIS53_06830"
     CDS             complement(3622..5826)
                     /gene="recQ"
                     /locus_tag="VIS53_06830"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEY5767532.1"
                     /translation="MELLSALKKHFGYDQFRPLQREIIEDALAGRDVFVLMPTGGGKS
                     LCFQLPALMRDALTIVVSPLIALMKDQVDALQTSGIPATYLNSTLDREEAKRRWRGLH
                     RGQYRMLYVAPERLMLDTFLERALNWNIAQFAIDEAHCISEWGHDFRPEYRELKRLRE
                     HLPDVPIMALTATATERVRADIIKELDLRGARAYVASFNRPNLAYRVVPKTAPYEQLL
                     VFIRSRPNDSGIVYCASRKSTESVARNLHEDGVIAKPYHAGLTSAERTKHQEAFLRDD
                     VRVITATIAFGMGINKPNVRFVVHYDLPKNLESYYQETGRAGRDGLPSECVLLFSASD
                     VAKQLHFIDEKSDSEARIARAQLQQMVHYAETRECRRTVLLGYFGERYAESSCEGCDN
                     CLTPRETFDGTIPAQKFLSCVHRIHAKSGFSFGLNHVVDVLRGADTEAIRQRGHNELS
                     TYGIGRDLKREAWQAIGRELLRLGLIESAPGKFATLSLTPAGLEALRKRTPITLTKQI
                     DIGEKAAETRPGALECDEALFDRLRGLRRKLGDERGVPAYIIFSDVSLREMARNYPVT
                     AGEFRRIPGVGEQKLKDFAEPFLTEIQDYLEKNDRRTFSDGNDSLVPQRRSRLNDSQT
                     ETLRRFQSGESVEQIARTRGFVRSTIYTHLLAAIASGKIAQARERFFTPAQENEIAAA
                     FHKVPDGTLVDISSLLGGKYDIGLLRIFREVHRDRSRPSSQRPAQPAASPGF"
     gene            complement(5927..6763)
                     /locus_tag="VIS53_06835"
     CDS             complement(5927..6763)
                     /locus_tag="VIS53_06835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767533.1"
                     /translation="MNLKIAAVVFAFLAPLNAGTVTAADLHPIIEIETGYFFGGSENG
                     QWIKADQAAKSVADNTTYQVYSLTKQVGQITAAQPTSVEEPCPDTLMVSLSSKPKDGV
                     IGLDAPWNALPRKPLIADVTQSVYVEAVRDFLKARGVADPKVQITRILRVDLDGDSEE
                     EVLISATNYFTEDKSDHSAAPFPEAPIESPRRGSYSIVILRRLVAGKVQTQLVAGELY
                     PKPDEPVAPNVYQIAAVLDLNGDGKLEVIVHSFYYEGGQTTIYRCQPEKIEEVLSVEC
                     GV"
BASE COUNT         1592 a         1998 c         1953 g         1502 t
ORIGIN      
        1 aaactgccgt atttgccgcg gcttgttttc tcgcggcgac ccgctgttac gccaccggcg
       61 gtgattcgta cgaatatccg gccaagttgt cggaaacgct cgctattttg ccaggcaaat
      121 cactcggcga aatttttctc gaaacatcgg caatcaaacc gccgacaaaa tcgtgggatt
      181 ctgcgaagtt gcgtgagctg gcagatcgca tcggcaaaga gccgctgtca cacctgctga
      241 aaactgcaga cgatttgatt gcgctggcgc gagcatccta cacacccgga agcgactcgt
      301 gcaaccttgc gcacgatgtt cgcgacaccg tcgccgtctc tggtgaaaat ccgaacgcag
      361 cacgcgaata tattttagag cggctcggcg ggaatctttc cggcggcgag ctcgatcaac
      421 gcgcggaatc ggccaggggc gcaattaaag ccaactggtt gtatttatgc ggcgcgcagc
      481 gattcgctgg cggcgaccgc gacgaatgtc aggattggtt caaccgcgtg gtgaaagaat
      541 ttccaaaagg tccgcgcgct gagatggcga tgttcatgag tgcgcgttgc gcgttctcag
      601 ccacgcgcaa attacaggag gcggcggaga acgaagaaat cctggcgaac gcgcgcaaaa
      661 tggcgatcgg gaaattcgag actcttcgca agcgctatcc acatggccgg ttcgacgccg
      721 acgcgctcgg ctggctgggc gcattggcgt acgattcgaa cgattatctt aaagcgctcg
      781 attattacat cgcgcaagcg gaaacgccgg gtcatccgga aacgctcatg agcgccattt
      841 ataactgcga gaaaacgctt gcgcacctgg cgccaaagcc aggaggcgac gccgctttcg
      901 cactcatcgc gcgtcacccg cgcatcgcaa tggctttcac gtacctcgtg cttgcctcgc
      961 ccgaagcgga caattacgac gggaagtggg acaatcccgc ggacgtacgc aagtggcgcc
     1021 ggactatttt gccgcgcatc gccgcagccg ttgctaaaca aaaagataga tacaaatcaa
     1081 ctgactggca gccgcgttac ctggccatgc tggtgcatgc gtccagcgcc agcgggaatc
     1141 acgcccaggc gctgcagctc tcgcaaattt ctccagatca attgagccaa agcgatgatt
     1201 tgctatttgc gcgtgcgatc acgctccaac gcgccagcaa aacgaacgaa gcaatcgatg
     1261 ttttccaaac atttctgaac accttcccga aatcgcgaat gacgccgggt gtgaaagtca
     1321 ggttggccct cgcattggca gacaatcacc aggctggtga cgccatagct acgctgcgcg
     1381 atttgctcgc aacagcttct ccgaattacg aaaaaccaac ccgtgccgca gaagaaagca
     1441 ctgatgagga taactccgca tcaagtgatg aagatgaaag cgccgacgaa gacaattcgg
     1501 catcaagtga agaagacgaa accactgacg aagacgaggc cgagcccaat cccggaaacg
     1561 gcaacagcga tgagaacaac tccgagtctg aaagcggcgc gaccggacac ggtcagctcg
     1621 acaaatttcc aatcgccgcg cgtctctaca tgtcaaacag cgaagggcac cccactggtg
     1681 aagtgcactg gaacgctgcc gacagcgccg tttacgacaa catctcgggc gccgacgaag
     1741 aacagattta ccaattcatt gacacgctcc tgaatttcgc gccgttgccg gaattgctaa
     1801 caacgccgga agacaaaaat ctggacgatg ccggcaagcg caaggtacgc gccatcctcg
     1861 ccgagcgtta tctcgcagct gaaaattttg ctgaagctaa gaagtacatt gtcgatccac
     1921 acaagcagca ggtggtcaat cagctggagc aactgaccaa tgacaaaaat ggcacgccgc
     1981 aacaaaaagc tgagcgaatg ctgaaacttg gagacacctg ggcggaggca cgcggtttgc
     2041 ttttacgcgc tccactcgat acggatctgc acgaagaggc gccagtttcc ggcctgctgc
     2101 gtcgcgagaa tggtcatacg ttgggcctgc ccaatgttga agatcaactc gacgaccgcg
     2161 acgaactaca ccatgcatcg cgctggtgga tgcgcgctgc gcgcgctctt cctggaacgc
     2221 cgctctcggc aaaagcgcgg ttgaaagcat tggaggcgtt acctcaaatt gcgcgcttct
     2281 cgctctacgc cgagcaacgc gcgcgcgaga tcaagctcga agctgtatcg cgcgagattt
     2341 acgacaaact gcgcgcggag tcgccgaact cgccggaagc gcaacgcttc gccgcgtatt
     2401 ggagtttgcc acctgagcaa aagaagtcgg aggaaacaag cgacgacctt tccacacaat
     2461 cggaccaaac agcagttgtt gagtgcgacg atagcgccgc gcctttgggc tatccgatct
     2521 ccgataagaa tgcttttggc gcgttgaccc ggaaaaatct cagcgggagt tccgaggaac
     2581 aagagcgacc ctatcaggtt tggaatgatg tcgaccgacg cgtgaaggaa ctgcgtcaaa
     2641 cagcggatgc tgccgaagtg aaagaccttc agcagttggt ccgcaaaaac atcagcgggc
     2701 gcgaagacgt tactctggcg aattgcctgg acgacctcgc gcaatttctc gccgaaccca
     2761 atctccccga cgaggctgcg cgcgtcgcgt atgtgaacct tcgcctcgat ctcttgcatc
     2821 gcacgcattg gcccgattcg cccgtcgatc cggatatttc cgtgcaagac agcgatgatg
     2881 cggtcgcagc agaaatcgat gaggtcgaga aaaatcccgc gctgcaatca ttccacgatt
     2941 atctggagtt ttgccgcatc ggtctggtcg caggcaaacg gatcgaagtg aagactgata
     3001 tccccggcgg caaagaattg gatggagtca cctattattc gcgtgatttt ccaaaaatcg
     3061 aaaaaatgac gcgcgatttt ctggccaaat atccgcgcag ccataaacgc gaagcggcaa
     3121 tgtttgttct ggcgcgcgcg atttactcgc tctcctgtcc gtacattctt tgcgacacgg
     3181 ccgcgccatc cgggagcgaa gaatatcgtt tggtcgatgt cgtccagaaa acccttcgcg
     3241 tagagccgtt cgatccgaag cgcgtcatgc aagctctgga cgattacgac cgcgaattcc
     3301 cccacggacg atacgctggc gacgtgcgcg acatgcgggc tgcgaccttt tggcggatgg
     3361 gcgactgggc caaagcgctc gatctgacgc tggcacagat tggtgatcgc gtcagtggtg
     3421 atctgttagg cgacgcggag acgcggctgg caaatatttt cgccgagctc gccaatgtcg
     3481 aacaccggcc gcaagtgctc gcagccattc gagcccatcc ggattgcatt ccgtatctcg
     3541 ccgcatacgt cggcgccgcc acgacggatc gagcgcatcc gctgcgttac ctccaaagct
     3601 acttgagcga ccaactgcat ttcaaaatcc cggcgacgcc gccggttgag ccggtcgctg
     3661 cgaactagga cgagatcggt cgcggtgaac ttcccggaaa atgcgcagca agccgatgtc
     3721 gtattttccg ccgagcaatg agctgatatc gacaagtgtt ccgtcgggca ccttgtgaaa
     3781 cgcggctgca atttcgttct cttgcgcggg cgtgaagaag cgctcccgtg cctgcgcgat
     3841 cttgccggat gcgatcgcgg ccaaaagatg ggtgtaaatc gtgctgcgca caaaacctct
     3901 ggtgcgcgcg atttgctcca cggattctcc gctttggaac cgtcgtaacg tttcggtctg
     3961 actgtcgttc aaacgggacc gccgctgcgg aacaagcgaa tcattaccgt cagaaaatgt
     4021 tcggcggtca ttcttctcca gatagtcctg aatttcggtg aggaagggtt cggcgaagtc
     4081 tttcagtttc tgctcgccta cgcccggaat gcgacggaac tcgcccgcgg tcaccggata
     4141 atttctcgcc atctcgcgaa gtgatacgtc ggagaaaatg atgtaagccg gaacgccgcg
     4201 ttcgtcgccg agcttgcggc gcaggccgcg caagcgatcg aacagcgctt cgtcgcattc
     4261 gagcgcgcct ggccgggttt ccgcggcttt ctcaccgatg tcgatttgct tggtcaatgt
     4321 aattggcgtc cgcttgcgca aggcctccag acccgcaggc gtgagcgata aggtggcaaa
     4381 cttgcccggc gcggattcga tcagccccag gcgcagcagc tcgcgcccga ttgcctgcca
     4441 cgcttcgcgt ttcaaatccc gcccaatgcc gtaagtcgaa agctcattgt gacctcgttg
     4501 cctgatcgct tccgtgtctg cgccacggag aacatcgacg acgtgattca atccgaagct
     4561 gaagccgctt tttgcgtgaa tgcgatgaac gcatgagaga aatttctgcg ccggaattgt
     4621 gccatcgaac gtctcgcgcg gcgtgagaca gttatcgcag ccttcgcatg aggactccgc
     4681 gtatctttcg ccaaagtaac cgagcagcac cgtgcgccgg cattcgcgcg tctcggcgta
     4741 atgcaccatt tgctgaagct gcgcccgcgc gatgcgggct tcactatcac ttttttcatc
     4801 gatgaagtgg agttgcttgg cgacatcgct ggcgctgaaa agcagcacgc attcgctggg
     4861 caatccgtca cgccccgccc ggcctgtttc ctgataatag ctctccagat ttttcggaag
     4921 atcatagtgc accacaaaac gcacgtttgg tttattgatg cccattccga acgcaatcgt
     4981 ggcagtgatc actcgtacat cgtcgcgcag aaacgcttcc tggtgtttcg tgcgctctgc
     5041 agatgtgaga ccagcatgat atggttttgc gatgacgcca tcttcatgga gatttcgcgc
     5101 cactgattcg gtgctttttc tgctggcgca ataaacgatg ccgctgtcgt taggccgact
     5161 gcggatgaaa acgagaagtt gttcgtacgg tgccgttttc ggaacgacac gatacgccag
     5221 attcggccgg ttaaagctgg cgacgtaagc gcgagcgccg cgcaaatcta attctttgat
     5281 gatatcggcg cgcacgcgtt cggtcgcggt ggcggtgagc gccatgatcg gcacatcggg
     5341 caaatgctct cgtagtctct taagctcgcg atactccggc cggaaatcgt ggccccattc
     5401 gctgatgcaa tgcgcttcgt cgatggcaaa ttgcgcaatg ttccagttga gggcacgctc
     5461 cagaaacgtg tcgagcatta gtcgctcagg tgcgacgtag agcattcgat attgaccgcg
     5521 atgcaagccg cgccagcgcc tctttgcttc ttcccgatcc agcgttgaat tcaaataggt
     5581 tgccggaatt ccactggttt gcagcgcgtc aacctgatct ttcatgagcg cgatgagcgg
     5641 ggacaccacg atcgttagcg cgtcgcgcat caatgctggc agctgaaaac aaagcgactt
     5701 gcctccgccg gtcggcatca acacaaacac gtcccgtccg gcgagggcat cttcgatgat
     5761 ttcccgctgc aacggacgga actggtcata gccgaaatgt ttcttcagcg cactcagcaa
     5821 ttccatcgtg cctttataag agaacgcgca tattttggca catcgaattt gcccgacaag
     5881 gagtgacggc ttccaagccg tcaacatccg ccaatctcgc gatctctcag actccgcact
     5941 cgaccgagag cacttcttcg atcttctccg gctggcagcg gtagatggtc gtttggccgc
     6001 cttcgtagta aaacgagtgg acaatcactt cgagttttcc gtcgccattc agatcaagga
     6061 ccgcagcgat ctggtacacg ttcggagcga caggctcgtc cggcttcggg taaagctcac
     6121 cggccacaag ctgcgtttga actttgccgg cgactaagcg tcgcaaaatg acgatggaat
     6181 aacttccacg tcgtggagac tcgattggcg cctcagggaa cggcgccgcc gaatggtccg
     6241 atttgtcctc ggtgaaataa tttgtcgcgc tgatcagcac ttcctcttcg ctatccccgt
     6301 ccaaatcgac gcgcaggatt cgtgtaattt gaactttggg atctgcgact ccgcgtgctt
     6361 tcaagaaatc gcggactgcc tccacgtaaa ccgactgagt gacatcagct attaggggct
     6421 tcctaggcaa agcattccac ggcgcgtcca atccgatcac gccatctttg ggtttcgacg
     6481 agagcgagac catcaatgtg tcagggcacg gttcttcgac cgatgttggt tgggccgctg
     6541 ttatttggcc gacctgtttg gtgaggctgt aaacctgata ggttgtattg tccgcgacgg
     6601 atttagctgc ttggtcagcc ttgatccatt gtccgttttc actgcctccg aagaaatagc
     6661 ctgtctcgat ctcaattatt gggtgcagat cggctgcggt gacggtcccg gcgttcaatg
     6721 gcgcaagaaa agcaaatacc actgctgcta tcttgaggtt cacaacgttt gcttttagtc
     6781 gggcggcagt cttttgccta gaactgtttg cttctgtgcg ttcgcgaaac cgtgcgaaac
     6841 ctgaggtcga tattgggaaa ccaatacgag tcctttgact gatggtcgcg ctcacgttga
     6901 cggaaggtat cacaaacatg ccctgcgctg caggaagcgt tgaagaacgt tcacgcgtct
     6961 cgaaccgaac actgaaaatg gcctacaata gcaccagtag gttcgactat gcctggttgt
     7021 tggattggca gctgtttcaa tgcaa
//
LOCUS       DATDAJ010000274         2298 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1536432, whole genome shotgun sequence.
ACCESSION   DATDAJ010000274 DATDAJ010000000
VERSION     DATDAJ010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1536432"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1100)
                     /locus_tag="VIS53_06840"
     CDS             complement(<1..1100)
                     /locus_tag="VIS53_06840"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEY5767534.1"
                     /translation="MTSPLHNFTALTTDLYEVTMACGYFKAGVTDHEAVFHVTFRENP
                     FAGQFTVACGLATAIDFLRSFHFTETEIGYLASQRGNDGKALFDSSFLDYLRDLRLNC
                     DIDAMPEGTLVFPNEPLIRVRGPVIECQLLETALLTILNFQSLIATKAARVCLAAQND
                     PVIEFGLRRAQGVDGGLTAARAAYVGGCAGTSNLQAGERFGIPVSGTQAHSWIMFFDT
                     EIEAFQTYARAMPNNCVFLVDTYNSLDGVRHAIDVARRLRSDGHEMIGVRLDSGDRAA
                     LSIETRRMLDEAGFANAKIVCSGDLDEFAIAKMKKRGAKIDIWGVGTKLTTGQPDAAL
                     GGIYKLGAIRPPGGEWQYRIKLSEESAKASVPG"
     gene            1183..2025
                     /locus_tag="VIS53_06845"
     CDS             1183..2025
                     /locus_tag="VIS53_06845"
                     /inference="COORDINATES: protein motif:HMM:NF014709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HEY5767535.1"
                     /translation="MKSKQPERSFSFLRINEREPKPRTRGLTEIRGAYYSVVGRRYLE
                     DLFELVGEYVDSLKFAGGSFSLMPETAVRNIIELCHHHNVLVSTGGFLEHVLAQGSDA
                     VRQYVAECQRLGFDIVEISAGFISISTDDWLRLIELVRKSGLKAKPEVGIQFGAGGAT
                     AAAELRAEGTRDPDWAIAQAKRFLEAGADIIMVESEGITENVDQWRTDVPGKFIDEIG
                     MEKLMFEAADPDVFAWYIKNYGADVNLFVDHSQIVQLECLRAGIWGTKSLWGRVVTYG
                     QDME"
BASE COUNT          504 a          626 c          665 g          503 t
ORIGIN      
        1 cctggaaccg aagctttcgc tgattcttct gaaagtttga tgcggtattg ccattcccca
       61 ccagggggtc ggatcgcgcc gagtttgtaa atgccgccaa gcgctgcgtc gggctggccg
      121 gtcgtgagct ttgttccgac gccccagatg tcgattttgg ctccacgctt tttcatcttt
      181 gcaatcgcga attcgtccaa atcacctgaa caaacaatct tcgcgttggc gaatccagcc
      241 tcatcaagca ttcgccgcgt ttcgatactc aaagccgctc ggtcgccaga gtcgagccgc
      301 acgcctatca tttcgtggcc atcactccgc aaccgccgcg ccacgtcgat tgcatgacgc
      361 acaccgtcaa gcgaattgta ggtatcgaca agaaaaacgc agttgttggg cattgctctg
      421 gcatatgttt gaaatgcctc gatttccgtg tcgaaaaaca tgatccaact gtgcgcttga
      481 gttccgctta ccggaatgcc gaatcgttcg cctgcctgca aattcgatgt gcctgcgcag
      541 ccgccgacgt aagccgcgcg agcggcggtt aagccaccat ccaccccttg tgcgcgtcgc
      601 aaaccgaatt caatcaccgg atcgttttga gcagccagac agacgcgggc tgccttggtt
      661 gcgatcagac tttggaaatt cagaattgtg agcagggctg tttccaacaa ctgacattcg
      721 atgaccggcc cgcgcactcg gattaacggt tcgttcggga agaccagtgt tccctcaggc
      781 attgcgtcga tgtcgcagtt caatcgcaga tcgcgcagat aatcgagaaa actggaatca
      841 aacagcgcct tgccatcgtt gccgcgctgc gacgcgagat aaccgatttc cgtttcggtg
      901 aaatggaacg agcgcaggaa atcgattgct gttgctaagc cgcaagccac ggtgaattgc
      961 ccggcgaagg gattttcccg gaacgtgacg tgaaacaccg cctcatggtc ggtcactccg
     1021 gctttgaaat aaccgcacgc catcgtgacc tcgtaaaggt cggtcgttag ggcggtgaaa
     1081 ttatgcaatg gagacgtcat gacgccgctt gcaatttaga cagccaatgc gggttcgcga
     1141 caaccgctcg ccgctcgcgt tccgttccct ttattgggag gaatgaaatc gaagcagccc
     1201 gagcgcagtt tttcgtttct acggattaac gaacgcgaac caaaaccgcg gacacgcggc
     1261 ttaacggaaa tccgtggtgc ctattattcg gtagtcgggc ggcggtacct cgaagacttg
     1321 ttcgaactag taggggagta cgtcgattcg ctaaagtttg ccggcggctc tttttcgctc
     1381 atgccggaaa ccgcagtgcg aaacatcatt gaactctgtc atcatcacaa cgtgctcgtt
     1441 tccaccggcg gatttctcga gcacgtgctt gcccagggga gtgacgctgt gcggcaatac
     1501 gttgccgaat gtcaaaggct cgggtttgat atcgtcgaga tctcagcggg gttcatctcc
     1561 atctcaaccg acgactggct gcggcttatc gaattggtgc gcaaatccgg gctgaaagcg
     1621 aagccggaag ttggaattca atttggcgcc ggcggcgcaa cagcagccgc ggagttgcga
     1681 gcagaaggca cacgcgatcc ggactgggcg attgcgcaag caaagcgatt tctcgaagcc
     1741 ggcgcggaca ttatcatggt cgagagcgaa ggaatcacgg agaatgttga tcagtggcgc
     1801 acggacgtgc cgggaaaatt catcgatgag atcggcatgg aaaagctgat gtttgaagcc
     1861 gctgatcccg atgtattcgc atggtatatc aaaaactacg gcgcagacgt gaatctcttc
     1921 gtcgaccaca gccagatcgt gcagctggaa tgtttgcgcg ccggcatctg gggaacgaag
     1981 agtttgtggg gcagggtggt gacgtacggc caagacatgg aatagacgcg ctgtcatcct
     2041 gagcgcagcg aagcggagtc gaaggatccc gcggaattgc ctttaggttt cgccccggga
     2101 ttgaaagcct ggcctcgccg cctgcggcgg ctgcgttgca gcctcgactt cgctcggaat
     2161 gacagtgaat cattgacgat cgcgtcgcgg cttgctgtcc ggatattcgg cggacacggt
     2221 gagcgcgatc ccgccgcgtg cggagaactg tgcggtgacg attgcctcgc gcggcgcaca
     2281 ggctttcacg aaatcgtc
//
LOCUS       DATDAJ010000275         4012 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1541520, whole genome shotgun sequence.
ACCESSION   DATDAJ010000275 DATDAJ010000000
VERSION     DATDAJ010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4012)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4012)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4012
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541520"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            184..1251
                     /locus_tag="VIS53_06850"
     CDS             184..1251
                     /locus_tag="VIS53_06850"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5767536.1"
                     /translation="MNRFVIVGLLVLIGVLPAAAKKKATKTKAPKTAEIEAATRLQVF
                     LDRANFSPGKIDGRYGDFTWKALSLYRESRGEQPPSTPPQSGRHANVSPDVSGLDLGS
                     VEPVFTSYTVTEADVQSVGQLPSQVPEQAKLKFLPYRDVADAIAEKFHSDIHYLEQLN
                     SGKLKGLKAGDQLKVPNVEPFELASVKDIKPGSETASQAANEVEDQPETQAPTPGESG
                     AARNVAIKVDTKTNMLGIFEAEKLIAAYPVTIGSAHNTSPIGEWKVRGISKLPRFRYD
                     KEMLEHGERSGNFYMLPAGPRNPVGVMWIALNKKGIGIHGTNEPGSIGRAASHGCIRL
                     ANWDVVRLATKIKTGDNVSIH"
     gene            1258..1845
                     /locus_tag="VIS53_06855"
     CDS             1258..1845
                     /locus_tag="VIS53_06855"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing metalloprotein"
                     /protein_id="HEY5767537.1"
                     /translation="MSETLAARAQATLDDWVQSESLRKHCYAVADSMKHFAQSRGEDT
                     DLWEAVGLLHDMDYERHPNLERSATEGHPFVGVAWLRENGWSEEVCRAILSHADYSGV
                     SRETPLEKTLYAVDELSSFVVAVALVRPTKSIHDVDVRAVKKKMKDKAFARAVNRDDI
                     ISGAEHLGMPLDDLIANVIAALKSDAARLGLVGAS"
     gene            complement(1857..2672)
                     /locus_tag="VIS53_06860"
     CDS             complement(1857..2672)
                     /locus_tag="VIS53_06860"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY5767538.1"
                     /translation="MAAERDYVLGTHEEELARLGLQHRVWRPVVLHCWQRAGITVGKR
                     VLDVGAGPGYAAIDLSEIVGATGEVVALERSQNFIRALETICRARSLANVKIHELDLM
                     KGDLPKRDYDFAWCRWVVSFVNDQSLLIEKLGGVMPKGSVAIFHEYGHYETWRFLPRL
                     PMQERFREHVIATWRESGGEPDGALQLPGLLGQNGFVIRSARPHIFCLRPSDYMWRWP
                     ATFIETYLERLIEMGRIDRKFAEEVRTALASAEKNPNARMLTPLVLEIIAEKL"
     gene            complement(2747..3904)
                     /locus_tag="VIS53_06865"
     CDS             complement(2747..3904)
                     /locus_tag="VIS53_06865"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HEY5767539.1"
                     /translation="MSKEISTRALFELNQTEMETVPYLDLQAQYRALRTEVLSAFEEI
                     CESTSFAQGRATSEFEAEFAAYCGVDHCVSLNSGTSALHLALRCVDVGPGDEVVTVSM
                     TFIATAWAISYVGATPVFVDIDPVRRTLNPENLEAAITSRTKAIIPVHLYGMPAEMDR
                     LMAIAERHGVPVIEDAAQAHGARYRGRRVGQFGQVACFSFYPSKNLGAYGEGGALITN
                     DASIAHRARSLRDHAQSQKYLHDEIGYNYRMDSFQGAVLAIKLKHLDEWNAARIDRAR
                     QYTELLEHSSYKLPAHMSDSECVWHCYVIETPERDRVRSALQEVGIQSAIHYPVPIHL
                     QKAFAHLDYRSGDLPVTEALCERCLSLPIYPELSNEKISRVASVLLDLENR"
BASE COUNT          959 a         1107 c         1093 g          853 t
ORIGIN      
        1 acttctggct tttgcatcgg cagaatatat cacaatttta aactctgtaa tctaggtcgg
       61 tcatcgaaaa tcatcagcgt ttcgcgtggg tatacctagg attgcaatcg taacagccgg
      121 cgagattggc cgctcaacac agccatcact gttaagtcgc acgatgcata ttgagtgaat
      181 gctgtgaatc gtttcgtaat cgtcggtctg ttggtcttaa tcggcgttct tccagcggcg
      241 gcgaagaaga aggcgacaaa gacaaaggcg ccgaagacgg cggagatcga ggcggcgacg
      301 cgactccagg tttttctaga tcgcgcaaac ttcagcccgg gcaaaatcga cggccgctat
      361 ggagatttta cgtggaaggc actttcgctt taccgcgaat cgcgagggga acaaccgccg
      421 tccacaccgc cacaatccgg ccgacacgcg aatgtctcgc ctgacgtttc tggactcgat
      481 cttggcagtg tggagcctgt gttcacttcc tacaccgtta ccgaagcaga cgttcaaagt
      541 gttggacaat tgccgagtca ggtacctgag caggcaaaat tgaaatttct gccgtaccgt
      601 gatgtcgccg acgcaattgc ggaaaaattt cacagcgaca ttcactacct tgaacaactt
      661 aattccggca aattaaaagg acttaaagca ggcgatcagc tgaaggtacc gaatgtcgag
      721 ccattcgaac tcgcttcggt gaaagacatt aagcccggca gtgaaactgc ttcgcaagct
      781 gcgaacgaag ttgaagatca acctgaaacc caagcgccaa ctcctggcga aagtggagca
      841 gcaagaaatg tcgccataaa agtggacacg aaaacaaaca tgctcggaat tttcgaagcc
      901 gagaagctga tcgccgcata tccagtcacg atcggctctg cgcacaacac ctcaccaatc
      961 ggtgagtgga aggtgcgagg catttcaaag ttacccagat ttcgttacga caaggagatg
     1021 ctcgagcacg gcgaacgcag tggtaatttc tacatgctcc cagcgggacc gcggaatcct
     1081 gtaggcgtga tgtggattgc gcttaacaag aaaggtatcg gcattcacgg gacgaatgag
     1141 ccgggttcga tcggacgcgc tgcgagccac ggctgcattc gcctggcgaa ctgggacgtt
     1201 gtccggcttg ccacaaaaat caaaacgggc gataacgttt caattcactg aattgagatg
     1261 agtgaaacgc tagccgctcg cgcgcaagct accttggacg actgggtgca atccgaaagc
     1321 ctgcggaaac actgctatgc agtcgctgat tcgatgaagc atttcgcgca atcgcgcggc
     1381 gaagacacgg atctgtggga agccgtcgga ttgttgcatg acatggatta tgaacggcat
     1441 ccgaatctcg aacgcagcgc caccgaaggc cacccgtttg tcggcgtcgc gtggctacgc
     1501 gaaaacggtt ggagcgaaga agtgtgccgc gcgattcttt cgcatgccga ttactcaggc
     1561 gtttcacggg aaacacctct cgaaaaaact ctgtacgccg tggacgagct aagcagtttc
     1621 gtcgtagcgg tcgcgctggt gcgcccgaca aaaagcattc acgacgtcga cgtccgcgca
     1681 gtgaaaaaga aaatgaaaga caaggcattc gcccgcgccg tgaaccgcga cgacattatc
     1741 agcggtgcgg aacatttggg aatgccgctc gacgacctca ttgcgaatgt catcgcggcg
     1801 ctgaaaagtg atgcagcgcg gctgggtctc gtcggagcgt cgtagcggaa tcgcggctac
     1861 aatttttccg cgatgatttc caacaccagg ggtgtgagca tccgggcatt cggatttttc
     1921 tctgcgctcg cgagagcggt gcgaacttcc tcggcaaact tgcgatcgat tcgccccatt
     1981 tcaatcaggc gttcgagata agtctcgatg aatgtggcag gccatcgcca catgtaatcg
     2041 ctcgggcgga ggcaaaagat gtgcggcctc gcggagcgaa tcacaaaacc attctgccca
     2101 agcagtccag gtaattggag tgcaccgtct ggttcgccgc cagattcgcg ccacgtcgcg
     2161 atcacatgtt cgcggaaacg ttcctgcatc ggaagccgcg gaaggaatcg ccacgtctcg
     2221 taatgaccgt attcgtgaaa aatggcgacg ctgcctttcg gcataacgcc gccaagtttt
     2281 tcaatcaata gagactggtc attgacaaag gacacgaccc accggcacca cgcgaaatcg
     2341 tagtcacgct tcggcaaatc acctttcatc aaatccagtt cgtgaatctt cacgttcgcg
     2401 agcgagcgag cgcggcagat tgtttccagc gcgcgaatga agttttgcga acgttccagt
     2461 gctaccactt caccggtggc cccgacgatc tcagaaagat caatggccgc gtagcccgga
     2521 ccggctccga catcgagcac gcgtttccca accgtgatgc cggcccgttg ccagcaatgc
     2581 aaaacaaccg gtcgccagac gcgatgttgc aggccgagcc tggctaactc ctcttcatgc
     2641 gtgccgagaa cgtaatcgcg ttccgctgcc atttctgatc gtcactgatc gacgccggat
     2701 tacaaacgcg atttgttttt gcgcagtcgg atctgtccgt ggcgcgtcag cgattctcca
     2761 gatcaaggag aacggaagcg acccgggaga ttttctcgtt cgagagttcg ggatagatcg
     2821 gaagtgaaag acagcgttcg cacagcgctt ccgtcaccgg aaggtcgcct gatcgataat
     2881 caagatgcgc gaaagctttt tggagatgaa tcggcacagg ataatgaatg gcactctgga
     2941 tcccgacttc ctgcaaggcg gagcggacgc gatcacgctc tggagtttca atcacgtagc
     3001 aatgccagac gcactccgaa tcggacatat gcgcaggcag tttgtatgac gagtgctcca
     3061 gcaattccgt gtattgtcgc gcgcgatcaa tgcgagccgc attccactcg tcgaggtgct
     3121 tgagttttat cgcgagcaca gccccttgga agctatccat gcggtagtta tacccgattt
     3181 cgtcgtgcaa gtatttttgg ctttgcgcgt gatcgcggag agaacgcgcg cggtgcgcta
     3241 tggatgcatc gtttgtgatc aaagcgccgc cttccccata cgcgccgagg tttttactcg
     3301 gatagaaact aaaacacgca acttggccaa actggcctac gcgtctgccg cggtatcttg
     3361 ctccgtgcgc ctgcgcggca tcttcgatca ccggcacccc atgtcgctct gcaatcgcca
     3421 tgaggcgatc catctctgcc ggcattccat acaaatgcac cgggataatt gccttggtgc
     3481 gggacgtgat tgctgcttcg aggttctccg gattcaacgt ccggcggaca gggtcaatgt
     3541 cgacgaacac cggcgtggcg ccgacgtaac tgatggccca cgcggtcgct atgaatgtca
     3601 tcgagaccgt cacgacttcg tctcctggac cgacatcgac acagcgcaaa gccaaatgca
     3661 gcgcgctcgt gccgctattc aagctgacac aatgatcaac tccgcaatac gctgcgaatt
     3721 ccgcctcgaa ctctgacgtt gctcgtccct gggcgaagct cgtcgactca caaatttcct
     3781 caaacgcgct cagcacctcc gtgcgcaggg cccgatactg cgcttgaaga tccaaatacg
     3841 gtacagtttc catttcagtc tgatttaatt cgaaaagcgc acgggtcgag atttctttgc
     3901 tcatcaatgt aggcggagat atgtaacgtc gccaccggcc cttctcagct gcaaggggcg
     3961 ggccaaggta ctcgttccta cgcgccgtca ttacgcgaaa tcgctaaatg gc
//
LOCUS       DATDAJ010000276        10549 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1549400, whole genome shotgun sequence.
ACCESSION   DATDAJ010000276 DATDAJ010000000
VERSION     DATDAJ010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10549
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549400"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..782)
                     /locus_tag="VIS53_06870"
     CDS             complement(<1..782)
                     /locus_tag="VIS53_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5767540.1"
                     /translation="MSVRAEVVVITGASAGVGRAAAREFARHSARIALLARGTDGLNA
                     ARREVEERGGEVLVIPTDVADADRVESAAAQIEAEFGHIDIWINNAMTSVFSPIKQMT
                     AAEFRRVTEVTYLGYVYGTLAALKRMLSRDRGVILQVGSALAYRGIPLQAAYCAAKHA
                     VQGFCDSLWCELLHDNSNVKVTMVQLPALNTPQFGWVKSRLPRKAQPVPPIFQPEVAA
                     EAIYFAAHNPRREFYVGLPTAGAIIADKLAPGLLDRYLARTG"
     gene            complement(878..1411)
                     /locus_tag="VIS53_06875"
     CDS             complement(878..1411)
                     /locus_tag="VIS53_06875"
                     /inference="COORDINATES: protein motif:HMM:NF018765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1360 domain-containing protein"
                     /protein_id="HEY5767541.1"
                     /translation="MERTQPHETEANFSIEEYGAKTAETEECEEQLLAEYATLLGFYL
                     ASAAVLTGVAVQQNRLPRKFGLLDLALLGIATHKLSRIVAKDRITGILRAPFVCYIRS
                     AGAGEVEEEPRGRGFQRGIGHLVSCPYCMAPWCATALSFGLLFAPRVTRFFAGILVSV
                     AASDFLHRAYLKMKEEK"
     gene            1822..3255
                     /locus_tag="VIS53_06880"
     CDS             1822..3255
                     /locus_tag="VIS53_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5767542.1"
                     /translation="MPIEYDAIVVGSGPNGLAAAITLARAGCSVLVYEANATIGGGAR
                     SAELTLPGFLHDVCSAVHPLAAGSPFFKTLPLERFGLEWIQPQVPLAHPLDNGSAACL
                     YRDIAVTAEQLDEDSGAYRRLMKPLARNWENLSIEFLQPMLHVPRHPFVLARFGVPAL
                     CPATLLSKFVFKGEPARALFAGIAAHSFLPLEAPVSSAFALVLGLAGHAVGWPIPRGG
                     SQQISNALADYLRELAGKIEVNHRIENLRDLPKSRVILLDISVWEFLRIAGQQLPSGY
                     RRRLESFRHAPGIFKIDYALSEPIGWKAEACRRAGTIHLGGSIDEIATAEREVARGKI
                     PERPFVLVAQQSLFDETRAPRGQHTLWAYCHVPFNCATDMSDQIESQIERFAPGFRDC
                     ILARHTMAAADLARSNPNLAGGDINGGAANLTQLIARPILAATPYRTPLPGVYLCSAS
                     TPPGGGVHGMCGYHAARAALREIFGKH"
     gene            3451..3885
                     /locus_tag="VIS53_06885"
     CDS             3451..3885
                     /locus_tag="VIS53_06885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767543.1"
                     /translation="MGDPRNVAHAKKVTQEKQHKTKAAQKTRASQPRKNAQIEQTKPA
                     ATEESIAPKQEAEKPPQPSDSAQSEKSHAVLSKLKELEFHSRGNIEKLAELSLTIEEE
                     LKQKAFAEAIGAVYSAQDAFQSKIVKLIEDYETECARLSGSI"
     gene            3997..4311
                     /locus_tag="VIS53_06890"
     CDS             3997..4311
                     /locus_tag="VIS53_06890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767544.1"
                     /translation="MKTKNLFTIAAVSVGLAFGVTTQAKEEKHEEQTINSSDVPAAVQ
                     QAAQAEAKGGTIVRWEKEGSNFEAVIKKNGKQIGVEIDATGKVLSKHDEAKEHKEKGE
                     KY"
     gene            complement(4467..5639)
                     /gene="chrA"
                     /locus_tag="VIS53_06895"
     CDS             complement(4467..5639)
                     /gene="chrA"
                     /locus_tag="VIS53_06895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HEY5767545.1"
                     /translation="MNNQDNVPPDDQMPSWREVFLYFLFLGFVNIGGPVAQITMMFNH
                     MVEKRRWLSKDRFIKIMAFCHMLPGPEALQLAIYVGYLKRKLWGGVLAGVTFIVPGAI
                     AMIVLSWLYVHYGKLPQVTDALYVLKPAVLGIIAAGIIKLGRASIRNVFLAVLLVAAF
                     AGMRFAGINFLLILLFAGILNLIAERGSALLKRSAPTLPVMLLGTGALISFSDSRLFQ
                     IAWLFFKTGLLSFGGAYASLVFVQRGAVAQYHWLSDGQLLDGVALSVATPGPFMLFTT
                     FVGYIAGGIPGAVLATFFVFLPSFVFVLGGAHYIEKVRDNRALQAFLAGVSAAVVGII
                     AVVSLDLIPEALVDWPSVGISVAAFLLIAFLKRDVALVALGAMLGGVIYSTARALA"
     gene            5788..6702
                     /locus_tag="VIS53_06900"
     CDS             5788..6702
                     /locus_tag="VIS53_06900"
                     /inference="COORDINATES: protein motif:HMM:NF019127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1259 domain-containing protein"
                     /protein_id="HEY5767546.1"
                     /translation="MKPTVIAATIFTALIDLVSAANLDTARIDQLTGLKGKLNEKEGV
                     YKVTFPRNDVKVVVDGWAMPPFMGLGTWAAFTSTKDGAMVMGDTVLFEDEVNAAMSAA
                     LDNGLNVTALHNHFFFDHPNVYFMHIEGEGAVDKLAGAVRKVYDAAKQIRAASPNPKD
                     SFGAARLPEKSSITAAPLNEMFGAQGESKDGMVKFTFGRPAQMHGVKIGKDMGVNTWA
                     AFAGSDDNAVVDGDFAVTEDELQAVFKSLRKDKINIVAIHQHMIHEEPRMIFFHYWGR
                     GRAKDLAEALKNASLVAGLQEVSSPAQD"
     gene            complement(7027..7305)
                     /locus_tag="VIS53_06905"
     CDS             complement(7027..7305)
                     /locus_tag="VIS53_06905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767547.1"
                     /translation="MRADKHEKREGAPCFRSNQQQCAAIKWICRSVRRRPRVSQSYLW
                     RKYIDGSWLSQWNVKSYLLLGAPLTNGSLIGQTRAAGKMNDVSWFGRL"
     gene            7350..8591
                     /locus_tag="VIS53_06910"
     CDS             7350..8591
                     /locus_tag="VIS53_06910"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY5767548.1"
                     /translation="MRTLIQISLAAALTTTCNAGRAIDAVVAEAFARNPEIRAYEAEI
                     AAARGARRAAGEWRNPEITADAGAKLVRDVPGGPDSNGVLWTVSAQQAFEYPGRVRLR
                     KAIANRQISLAELELEGFKAALAAQVRAAIYRAALSAAKIGETGEVSTRFDELSSVLS
                     QRPVAGVAPQLDLRIIEANANSLKRRALAAEREIQSARYALNQLRGARPEAALDIPQI
                     DSTLAPIPETATLLTTARRQNYDIRTHVMELEQQGFKVQLALNERWPAVQLGPFAHQE
                     RADTNEYHFGIGMTVPLPLWNRNAGNIETAKARAAKAEAELAAIAREVDRKVADAAFL
                     YRSRGEEAEKLQSSILPQMREAAELADRNYRTGALPITTYTEIQKQYLDSLDAFFTAQ
                     SAAIEARQQLEQLTATRLDRR"
     gene            8588..>10549
                     /locus_tag="VIS53_06915"
     CDS             8588..>10549
                     /locus_tag="VIS53_06915"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEY5767549.1"
                     /translation="MIDKILEISLRQRAFVLLAAFALLGVGLWSGARLPIDAVPDITG
                     VQVQINSEIPALAAEESERLVTRPIEIEMAGVPGLEEMRSLTKFGLSQVTLQFRDGTD
                     VYRARQLVTERLQAAVERLPQSVAPKLAPISTGLGEIFYYNVSYKPGAQKPNSLREQL
                     FELNELQEYTIKPLLRTVPGIADINESGGYERQFVIQPRPEDLERTGMTFSELADIIA
                     ANVENAGGGIISRGGNQLTIRAVTRANTIEDIGNLPVKFAAGVKPLLVKDLADVTYAS
                     RFRTGAATIDGQETVIGTTMMLAGENSREVAERVKTRLAEIQEKLPDNVQIQSQYDRS
                     ILINKTIHTVRNNLFEGAILVIAVLFALLGNWRAALIVTAAIPLSFLFAVTGMLKFGV
                     SGNLMSLGAIDFGLIIDGAVVIVENVVRQLGIRQHALRRPLTTEERLHTVLTASKQVG
                     SPMFFGVAIITIVYIPILALTGIEGKMFHPMALTVMLALTGALILALTLMPVLCSFLL
                     RGRIREGDNFIVRAVKAIYGPSLRLALALRWIVVLAAIAVFAGSLWLFNHLGAEFVPK
                     LDEGSITAMLYKPVGMSMEDSLKTDLEVENRLHAEFPEITRVFSRIGTSEIATDPMPP
                     NESDVYIFYKPVSEWPKTAGRPRNKAELRE"
BASE COUNT         2463 a         2909 c         2957 g         2220 t
ORIGIN      
        1 aatccggtgc gggcgagata gcgatcgagc aagccgggcg caagtttgtc tgcaatgatc
       61 gctccggctg tcggcaggcc gacatagaat tcgcgccggg gattgtgcgc ggcgaagtaa
      121 atcgcttccg cagcgacttc aggctgaaaa atcgggggca ccggctgcgc tttgcgcggc
      181 aaacggcttt tgacccagcc gaattgcggc gtgttgagcg cgggcaattg caccatcgtg
      241 accttcacgt tgctgttgtc gtggagtagt tcgcaccaaa gcgaatcgca aaacccctgg
      301 acggcgtgct tggccgcaca atacgcggcc tgcaacggaa tgccgcgata tgccagcgcg
      361 ctgccaactt gcaagatgac accgcgatcg cgcgaaagca tccgttttag cgcagcgagt
      421 gtgccgtaaa catatccgag ataagtcacc tcagtcacgc gtcgaaattc cgcagctgtc
      481 atttgtttga tcggcgaaaa gaccgacgtc atcgcgttat tgatccagat atcgatgtga
      541 ccgaattcgg cttcgatctg ggcggccgct gactcgactc gatctgcgtc ggcaacgtcg
      601 gttggaatga cgagcacttc gcctccccgc tcttccactt ccctgcgcgc ggcatttaat
      661 ccatcagttc ctctcgcgag cagagcgatt cgtgcgctat gacgcgcaaa ctctctcgcg
      721 gctgcgcggc ccacgccggc tgacgcgcct gtgattacga caacttctgc acgcacactc
      781 atttcgtctg aaagtcatcc tcacctcaat agtctcatcg ctccgcccgg tcgcgatccc
      841 ggcgaggcgg acgcgaagcg cctggtgagg gtgttctcta tttttcttcc ttcatcttga
      901 ggtacgcgcg gtggagaaag tccgaggcgg ccacgctcac caaaatcccg gcgaagaacc
      961 gcgtcacacg aggagcgaaa agcagaccga aactcaaagc cgtggcgcac cagggcgcca
     1021 tgcaatacgg gcacgaaact aaatgaccga tcccgcgttg gaatccacgg ccgcgtggct
     1081 cttcttcgac ctcgcccgcg cccgcactgc ggatgtagca cacaaacggc gcgcgcagaa
     1141 tgccagtgat tctgtccttg gcgacgattc ggctcagctt gtgcgtcgct attccaagca
     1201 gcgccagatc aagcaaacca aattttctgg gcagacggtt ctgttgaacg gcaacccctg
     1261 ttagaacagc cgcactcgcc aggtaaaagc cgagtagcgt cgcgtattct gcgagcaatt
     1321 gttcctcaca ctcctccgtt tccgcagtct tcgcgccgta ctcctcgatc gaaaagttgg
     1381 cttcagtttc gtgaggctgt gttcgctcca tagaacttga atcgaaagat tctgctcgtt
     1441 tgcgcgtgga acgcagacga cgcacaggtt catttctttg cgagaacacc aagtatacgg
     1501 cggtgccggt aattgtaggg catctatatc agccccgaaa cgtttcgggg ttcacagaat
     1561 ggagtcgcgg gcacgcgagc gacatagacg ggcagcccat ccgggcgaga gagcgggagc
     1621 gaacgagtca aacgccctac aatatgatca aggcgttgcc agctacatcg cgaggttctg
     1681 gatctttgcg cgtttcagaa tcaggatttc accttgtgtc atgttgagcg aagcgaaaca
     1741 tctctgactc tttccgaaac tcatgtgaaa ctgatcagag attgttcgct tcgctcagaa
     1801 tgacagggat gcaatttcaa tatgccgatt gaatacgatg cgattgtcgt cgggtcggga
     1861 ccgaatggtc tcgcggcggc aattacactt gcgcgcgcgg gatgttccgt gctcgtttac
     1921 gaagcaaacg cgacaatcgg cggcggcgcg cgttcggccg aactcactct gcctggcttt
     1981 ctgcatgacg tctgttcggc agttcatcca cttgcagcag ggtcgccgtt tttcaaaacg
     2041 ctgccgctgg agcgcttcgg tcttgaatgg atccagccgc aagttccact ggcgcatccg
     2101 ctcgataacg gctccgccgc ctgcctctac agagacatcg ccgttactgc ggaacaatta
     2161 gacgaagatt caggcgcgta tcgccgcctg atgaagccgt tggcgaggaa ctgggaaaat
     2221 ctgtcgattg agttcctgca gccaatgttg catgtcccgc ggcacccgtt tgtgttggcg
     2281 cgatttggag taccggcgct ttgcccggca acgttgctgt cgaaatttgt cttcaaagga
     2341 gaaccagcgc gtgcgctctt cgccgggatc gccgcgcact cgtttcttcc actggaagcc
     2401 ccggtttcgt cggcatttgc gttggtgctg gggcttgccg gacacgcggt ggggtggccg
     2461 attccacgcg gcggatcgca gcaaatttcg aacgcgcttg ccgattatct gcgtgagctt
     2521 gccgggaaga tcgaagtgaa tcatcggatc gagaatcttc gcgatctgcc gaaatcccgc
     2581 gtgattctcc tcgatatttc ggtctgggag tttttgagaa tcgccggtca acaattgcca
     2641 tcgggctatc gccgcagact ggaatcattc cggcacgcac ctggcatttt caaaatcgat
     2701 tatgcgctga gtgagccgat aggatggaaa gcggaagctt gccgtcgggc aggaacaatt
     2761 catctcggcg gcagcattga cgaaattgcg acggcggaac gcgaggttgc gcggggaaaa
     2821 attcccgagc gcccgtttgt actggtcgcg caacaaagct tgttcgatga aacgcgagcg
     2881 ccgcgtggtc agcatacgct ctgggcttat tgtcatgttc cgttcaactg cgccacggac
     2941 atgtcggatc aaatcgaatc gcagatcgag cgattcgcgc ccggttttcg cgattgcatc
     3001 ctggcccgcc atacaatggc tgcggctgat cttgccagat cgaatccaaa tctagctggc
     3061 ggcgatatca acggcggcgc agcgaacctg acccagctaa ttgcacgacc gattcttgct
     3121 gcaactcctt atcgtacccc tttgcctggg gtctatttgt gttcggcttc cacgcctccg
     3181 ggcggcggtg tccacggcat gtgcggttat cacgccgcgc gcgcagcgtt gcgcgagatt
     3241 ttcgggaaac actagagttc atctcataaa tgtcgctgtc atgttgagcg aagcgaaaca
     3301 tctctgtcta tttccgttgg tggatcggtc cagatttgat ccgagattct tcgcttcgct
     3361 cagaatgaca ttcgggatct taccaaatcc ctgggagcac tttgctcggt agatacggcc
     3421 gccggacctc tgaaacccgt ctataagttc atgggagacc cgcggaacgt cgcacacgct
     3481 aagaaagtca ctcaagagaa gcagcataaa accaaggctg ctcaaaagac tcgtgcgtcc
     3541 cagccacgca agaatgcgca aatcgagcaa acgaaaccag ctgcaactga ggaaagcatt
     3601 gcgccaaagc aggaggccga aaagccgcct caaccatcag attccgcaca atcggagaaa
     3661 tcgcatgcgg ttctatccaa gctcaaggag ttggagtttc attcccgtgg caacatcgaa
     3721 aagctcgccg agttgagctt aacgattgaa gaagagctca agcaaaaggc tttcgctgaa
     3781 gcaatcggag cggtctattc ggcgcaggac gcatttcaat ccaaaatcgt gaagttgatt
     3841 gaagattatg aaacggagtg cgcgcgtttg tcgggctcta tctgacatcc ggtgctgatc
     3901 ggctcaggac ttcggatttt tttttgcagt ttttccatgc cagtgaggcg tcaatttcga
     3961 acaatactta aaacctgaca gtcaaaacct actgacatga aaacgaaaaa cctattcacg
     4021 atagcagcgg ttagcgtcgg cctcgcattc ggcgtgacca cacaagcgaa ggaagaaaaa
     4081 cacgaagaac aaacgattaa cagttctgat gtcccggctg cggtgcagca agccgcccag
     4141 gcagaagcca aaggcggaac gattgtccgc tgggagaaag agggctccaa ctttgaagcc
     4201 gtcatcaaga agaatggcaa gcagattggc gttgaaatag atgcgactgg gaaagtgctg
     4261 agcaaacacg acgaagccaa agagcacaaa gaaaaaggcg agaaatacta atcgctgagt
     4321 gagtcgcgtt gtcgcaaacg ctatgttaat cgaagcgcgg cggaggcgga ttatcttaac
     4381 atcgtcttcg ccgtgttcgc gcgggtaggg cgcgtcactc ctatgcgcgc cgccacgtga
     4441 attgcaaatc caatgcgtgc ctacagtcac gcgagcgcgc gggcggtcga gtaaattact
     4501 ccgccgagca ttgctcctaa agccaccaga gcaacgtccc gcttcaaaaa tgcgatcaga
     4561 agaaaagcag ccaccgagat accgacactc ggccagtcaa cgagcgcttc gggaattaga
     4621 tcgagcgata cgacggcgat aataccgaca actgcggcac tcacgccggc gaggaacgcc
     4681 tgaagtgcgc ggttgtcgcg gactttttcg atgtagtgcg cgccgccgag cacgaataca
     4741 aaagacggca aaaacacaaa aaaagtggcg aggaccgcgc caggaattcc cccggcgata
     4801 taacccacaa aggtcgtgaa caacatgaac ggccccggcg ttgccacact gagcgcaacc
     4861 ccatcgagca gttgtccgtc ggacaaccag tgatattgcg caacggcgcc gcgctgcacg
     4921 aaaacaagcg atgcatacgc gccgccgaag ctcagtaatc ctgtcttgaa aaacagccag
     4981 gcaatttgga acaagcgtga atcgctgaat gaaatcagcg caccggttcc aagaagcatc
     5041 accggcaaag ttggcgcact ccttttgagc agcgcagatc cgcgctccgc gatcagatta
     5101 agaattccgg cgaatagaag aatcagcaga aagttgattc ccgcgaaacg cattcctgca
     5161 aacgcggcaa ccagcagaac cgcaaggaac acgtttctga tcgaagcgcg cccgagtttg
     5221 ataattcccg cggcgatgat gccgagcaca gccggcttaa gcacgtagag agcgtccgtt
     5281 acctgaggaa gcttgccata atgaacatat agccaactca gaacaatcat ggcaattgcg
     5341 ccgggcacaa tgaaggtgac accggccaac acgccgcccc atagtttgcg tttcaggtaa
     5401 ccaacgtaga tcgccaattg cagcgcctcc gggccgggaa gcatgtggca gaaagccatg
     5461 attttgatga agcgatcttt ggagagccat cggcgtttct ccaccatgtg attgaacatc
     5521 atcgtgatct gcgccaccgg cccgccgatg ttgacgaagc caaggaagag gaaatacaga
     5581 aacacttcgc gccacgacgg catttgatcg tctgggggca cgttgtcttg attgttcaca
     5641 gctcaacgca aggcaggtgt gccgctgccc tttggtcgtc gatcttcact cgatttcgag
     5701 ttattgtcgc gaaaataacg aacgtggctg gcatcacatt taagttccgg tcgtcgaagg
     5761 aagctagcca ttgaaggaat actaactatg aaaccgacgg taattgcggc tacaattttc
     5821 accgcgctaa ttgacctcgt ttccgctgcg aaccttgaca cagcgcgcat cgaccaactc
     5881 accgggctca agggaaaatt gaacgagaag gaaggcgtct acaaagtgac ctttcctcgc
     5941 aacgacgtga aggtcgtcgt ggacggatgg gcaatgccgc cgttcatggg tctcggaacg
     6001 tgggccgcat tcacctcgac aaaagatgga gcaatggtga tgggcgatac ggttctgttt
     6061 gaagatgaag tcaatgcggc aatgtcagct gcgctcgaca atggccttaa cgtcactgcg
     6121 cttcacaatc atttcttctt tgatcatcca aatgtctatt tcatgcacat cgaaggagaa
     6181 ggcgcagtcg ataagctggc cggtgctgtc agaaaagttt acgatgctgc caaacagatt
     6241 cgcgccgcaa gtccaaatcc aaaggactcc ttcggcgctg cgcgcttgcc ggaaaaaagt
     6301 tcaattactg ctgcgcctct caacgaaatg tttggagcgc agggagaatc taaagacgga
     6361 atggtcaagt tcacgttcgg cagacctgca caaatgcatg gcgtaaagat cggcaaagac
     6421 atgggcgtaa acacgtgggc agcgttcgcc gggagcgacg acaacgccgt tgttgatggc
     6481 gacttcgcgg tgacggaaga cgaattgcaa gcggtcttta aatcgctgcg taaggacaag
     6541 atcaacatcg tcgccattca ccagcacatg attcacgagg aaccgcgcat gatatttttc
     6601 cattattggg gacgcggccg cgccaaagac ttggcagaag cactcaagaa cgcgtcgctg
     6661 gtggccggct tgcaagaagt cagctcacct gctcaggatt gaggcttgca tctgttcatg
     6721 ggatgcgcat ccacgcggct ctcttgtatt gacttcagct aaccgaccgc ccaccttggg
     6781 ctgatgacga agctattccg gcgacaattg cgtgagtgct tagctttcgg cccgggagtg
     6841 atgatatgca tagggatcgc ttgcagtggt cagatcttgc cgctgttagt cgctcagatt
     6901 gtttcgttgg atccggatca tcacgtggtc gtccatgtcg gttcacgtgg gatcgatttg
     6961 gtgctgacac acgatactcc tactgctgtg tccgggaccc cgcaggggac gcgatcgtcg
     7021 attgcatcag agtcgtccga accagctcac atcattcatt tttccagcgg cacgagtttg
     7081 gccaatcaaa ctgccgtttg tgagaggagc acccaacagc aaatagctct tcacgttcca
     7141 ctggctcagc caacttccgt cgatgtattt gcgccaaagg taactctggc ttactcgcgg
     7201 ccgccgccgc accgaacggc aaatccattt gatcgcagca cactgctgct gatttgagcg
     7261 aaaacacgga gcgccttcgc gcttctcgtg tttgtccgcg cgcactccct cgcgcggtct
     7321 gcctgtttgc tttcaccagt ccatttcatt tgagaactct tattcaaatc agtttggcag
     7381 cggcattgac gacgacgtgc aacgccggtc gcgcaattga tgcagtcgtc gccgaagcgt
     7441 tcgcgcgtaa tccagagatc agagcttacg aggcggaaat cgccgccgcg cgcggcgcac
     7501 ggcgggcggc gggtgaatgg cggaacccag agatcaccgc tgatgcgggc gcaaaattgg
     7561 tgcgcgacgt gccgggcggc cccgacagca acggtgtgct gtggacggtc tcggcccagc
     7621 aggcgtttga gtatcccggc cgcgtacgat tgcgaaaggc gatcgcgaat cgacagatct
     7681 cgctggctga gctcgaactg gaaggattta aagcggcact cgctgcgcag gtccgcgcgg
     7741 cgatttatcg cgcggcattg agcgcagcga aaattggcga aacgggcgaa gtatcgacac
     7801 gattcgacga gttatcgtcg gtgttgtcgc agcgtcctgt agcgggcgtc gcaccgcagc
     7861 ttgaccttcg tattatcgaa gcgaatgcga attcgttaaa acggcgagca ctcgcagcag
     7921 agcgtgaaat tcaaagcgcg cgttacgcgt tgaaccagct gcgtggcgcg cggccagaag
     7981 cggcgctcga cattccacaa atcgattcga cgctcgcgcc tattccggaa acagcgacgt
     8041 tgctcacgac ggcacgacga cagaattacg atattaggac gcacgtaatg gagctggaac
     8101 agcaaggctt caaagtgcag ttagccctga acgagcgctg gccggcggtg cagctcgggc
     8161 cctttgcgca ccaggagcgc gcagacacga atgagtatca cttcggcatc ggcatgacgg
     8221 tgccgttgcc tttgtggaat cgaaatgcgg gcaacattga aacggcgaag gcccgtgcgg
     8281 cgaaagcgga agccgaactg gctgcaatag cacgtgaagt cgatcggaag gtcgcggatg
     8341 cggcattcct ttacagatcg cggggcgaag aagcggagaa gttgcagtcg tcgatcctgc
     8401 cgcagatgcg tgaggccgca gaattggccg atcggaatta tcgcaccgga gcccttccta
     8461 taacgactta caccgagata caaaaacaat atctcgactc actcgacgcc tttttcactg
     8521 cgcagtccgc cgccattgaa gcgcgacaac aactcgagca gctcaccgct acgcgactcg
     8581 acaggcgatg atcgacaaaa ttctcgaaat atctttgcgg cagcgcgcgt ttgttttgct
     8641 cgcggccttt gcgttgttag gtgtcgggct ttggtccgga gcacgcttgc ccatcgacgc
     8701 cgtgcccgac atcaccggcg tacaggtaca aatcaacagc gaaattcccg ccctggcagc
     8761 cgaggaatcc gaacgactcg tgacgcgacc gatcgagatc gaaatggccg gagttcctgg
     8821 gctcgaagag atgcgctcac tgaccaagtt cggtctctcg caagtgactc tccaattccg
     8881 ggacggcacc gacgtttatc gcgcgcgcca gcttgtgact gaacggttgc aggcggccgt
     8941 cgagcggttg ccccaaagcg tggcgccgaa actagcgccg atcagcacag ggttgggcga
     9001 aattttttat tacaacgtct cctacaaacc cggtgcgcaa aaacccaatt cgctgcgcga
     9061 gcagttgttc gaattaaatg aacttcagga atataccatc aagccgttgc tccgtaccgt
     9121 tcccggcatt gccgatatta acgaaagcgg cggatacgag cgacaattcg ttatacaacc
     9181 gcggccggaa gatttggaac gaaccggaat gacgtttagt gagctcgccg acattatcgc
     9241 cgcgaatgtg gaaaacgctg gtggcggcat tatcagccgc ggcggaaatc aactgacgat
     9301 ccgtgcagtc acacgtgcga acacaattga agatatcgga aatctgccgg tgaaattcgc
     9361 agcaggtgtg aaaccgttgc tcgtcaaaga tctcgccgac gtgacctacg cgtcacgctt
     9421 tcgcaccggt gccgcaacaa ttgatggcca agagaccgtg attggcacga cgatgatgct
     9481 cgctggcgag aacagccgcg aggttgccga gcgcgtcaag acgcgtcttg ccgaaataca
     9541 ggagaagcta cccgacaacg tgcagatcca atcgcaatac gatcggtcga tcctgatcaa
     9601 caaaacgatt cacaccgtgc ggaacaattt gtttgaaggg gcgattttgg tgatcgccgt
     9661 tttatttgcg ttactcggta actggcgcgc cgcgcttatt gtgaccgccg cgattccgct
     9721 ttcgttttta ttcgcggtca ctggcatgtt gaagttcggc gtttcaggaa atctgatgag
     9781 tcttggggcg atcgatttcg gtctgatcat cgacggcgcg gttgtgatcg tagaaaatgt
     9841 cgtgcgtcag ctgggaattc gtcagcacgc tcttcgccgc ccactgacaa ctgaagaacg
     9901 cctccacacc gtccttaccg cgagcaaaca ggtcggtagt cccatgttct tcggcgttgc
     9961 catcatcacc atcgtttaca taccgattct cgcgctcact ggcatcgaag ggaaaatgtt
    10021 tcatccgatg gcgctgactg tgatgctcgc gcttactggc gcgcttatcc tggcgctgac
    10081 gttaatgccg gtgttgtgct ccttcctgct gcgtggccgg attcgtgagg gcgacaattt
    10141 catcgttcgc gctgtcaaag cgatttatgg accgagcttg cgactggcac ttgcgctacg
    10201 gtggatcgtc gtgctcgccg caatcgctgt tttcgccgga tcactctggc ttttcaatca
    10261 cctcggcgct gaattcgtgc cgaagctgga tgaaggatcg atcaccgcca tgctctacaa
    10321 accagttggt atgagcatgg aggattcctt gaagaccgat ctcgaggtgg aaaatcgact
    10381 gcatgccgag ttccctgaga tcacgcgcgt attttcgcgc atcggcacga gtgagatcgc
    10441 gaccgatccc atgccgccta acgaaagtga cgtttacatc ttctacaaac cggtgagcga
    10501 atggccgaag actgccggcc ggccacgaaa taaggcggaa ctgcgcgag
//
LOCUS       DATDAJ010000277         3046 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1549981, whole genome shotgun sequence.
ACCESSION   DATDAJ010000277 DATDAJ010000000
VERSION     DATDAJ010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1549981"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..742)
                     /locus_tag="VIS53_06920"
     CDS             complement(8..742)
                     /locus_tag="VIS53_06920"
                     /inference="COORDINATES: protein motif:HMM:TIGR00044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEY5767550.1"
                     /translation="MSSITENLHRVREQIATAAAKSGRLVGDVELVAITKTHPAEKVR
                     EAVEAGQTLFGESRVQEARAKIPELSSNLRWHFVGHLQKNKVRQALPLFEMIHSVDSL
                     AVAQDINRIAEEEGLYPRVLLEVNVAGEGSKFGFAPDDLRQQMEALLGLRRVSIEGLM
                     CIPPLALESEDSRKFFVQVRELRDSLEKEFNMKLTQLSMGMTQDFPIGIEEGATLVRV
                     GTAIFGERSKKQKATDEHGFSRIAEA"
     gene            883..1227
                     /locus_tag="VIS53_06925"
     CDS             883..1227
                     /locus_tag="VIS53_06925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767551.1"
                     /translation="MNYLLVNRPEITQKELIMKRYSLLVAIIITAVCASSFAQDKASL
                     QPNATVASLLQGSTGKNVELHLRSGEKMGGKIAQVTDNVVHLSNLTGAEYFDAFVDVK
                     DIAAVVVRVGGK"
     gene            1336..1479
                     /locus_tag="VIS53_06930"
     CDS             1336..1479
                     /locus_tag="VIS53_06930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767552.1"
                     /translation="MITKNIGMLLLAIYLIAVGIVTLTGLGIGIITGVLALLAGIFIL
                     IGR"
     gene            complement(1490..2188)
                     /locus_tag="VIS53_06935"
     CDS             complement(1490..2188)
                     /locus_tag="VIS53_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY5767553.1"
                     /translation="MKLWIGTSGFQYAEWKGSFYPEDLPAAKMLSFYAERFPTTEVNY
                     TFHRIPAPKTIDNWKAQTPEKFRFALKAPQKITHWSKLRDCVDTLEYFCKVVSGLGER
                     LGPVLFQLPPTFKKDADVLSSFLREFPAMRAAFEFRHDSWFADDIFDLLKSRNIALCI
                     ADTDTIATPKNITADYGYLRLRREDYTDEDVKRWSEFVREQNTNWTDAFVYFKHEESG
                     IGPKLAQQMLKLLL"
     gene            2373..2699
                     /locus_tag="VIS53_06940"
     CDS             2373..2699
                     /locus_tag="VIS53_06940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767554.1"
                     /translation="MKKLLLSMALAVVAPFAWAQVSQTTTTTTTEGSGTITEYSPGSQ
                     IVLRETSGPRTYRFGKTVTYVTRSGKVLDPDVVKTKIKVGVPVRVHYVGTGDSMMVDR
                     VIVDED"
     gene            2839..3021
                     /locus_tag="VIS53_06945"
     CDS             2839..3021
                     /locus_tag="VIS53_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEY5767555.1"
                     /translation="MKLQMKGSWNEIKGKLKQKYGQLTDDDLTFADGKEDELLGRLQK
                     RLGRTKDELRSEIEEM"
BASE COUNT          749 a          804 c          782 g          711 t
ORIGIN      
        1 attgatttca agcttctgca atccgtgaaa atccgtgttc atctgtggct ttctgcttct
       61 tcgagcgctc gccgaagatc gccgtaccca cacgcacaag cgtcgcgccc tcctcaattc
      121 caatgggaaa atcttgcgtc atgcccatcg aaagttgcgt cagcttcatg ttgaattcct
      181 tttcgagcga atcgcgcaat tcccgaactt gcacgaaaaa tttccgcgaa tcctccgatt
      241 ccagagcgag cggtggaata cacattagtc cttcgattga cacgcgccgc agtcccagca
      301 gcgcttccat ttgctggcgc aagtcgtcgg gcgcaaagcc gaatttgctc ccctcaccgg
      361 ccacattcac ttcaagcaac acccgcggat acaacccctc ttcttccgca atccggttaa
      421 tgtcttgcgc caccgcaaga gaatcgacgc tgtgaatcat ttcgaatagc ggcagcgcct
      481 ggcgcacttt gtttttctgg agatgtccga caaaatgcca ccggagattt gacgatagct
      541 ccggaatctt tgcgcgcgct tcttgcacgc ggctttcacc gaagagagtt tgcccggctt
      601 caaccgcctc gcgcactttc tcagccggat gcgtcttggt gatcgcgacc agctcaacgt
      661 caccgaccaa tcggcccgat ttcgcggcgg ctgtcgcgat ttgctcccga acgcggtgga
      721 gattttcggt gatcgaactc atgccgaatt gtagggcagg cgctgcgcgt gccaatgaca
      781 aatcaaacca ccggtggttt cctggtcacg cgcgctgcct cgcatgaagt gcaactcccg
      841 catgattcgc acggcggact caagaccgct cctccttgac cgatgaatta tttactggtc
      901 aatcgaccag aaatcacgca gaaggagctg attatgaaac gttactcact tcttgttgca
      961 ataatcatta ccgccgtctg tgccagctcg ttcgcgcagg ataaagccag cctgcaacct
     1021 aacgcgacgg tcgccagcct tcttcagggc agcacaggta aaaatgtcga actgcatttg
     1081 agatccggag aaaaaatggg cggcaagatt gcgcaagtaa cggacaacgt cgtgcatctt
     1141 tccaatctca ctggcgcgga atatttcgac gctttcgtcg acgttaaaga cattgctgcg
     1201 gtggtagttc gtgtcggcgg caagtagcag attctaaggc tccgattttg acgatttaaa
     1261 gcttcgcgcc ggatgatcgg gtgacgcgta ggcattcggg attgtctcat tggcgcgctt
     1321 cctcatactc accccatgat taccaaaaat atcggcatgc ttctgctcgc gatttatctc
     1381 atcgcggtgg gaatcgtcac cctcactgga cttggcatcg gaattataac tggcgtgctg
     1441 gcgctgctgg caggaatttt tattttgatc gggcgctagc tctcccgagt cacaggagca
     1501 atttcaacat ctgctgcgcg agtttcggcc cgatgccgct ttcttcgtgc ttgaaataga
     1561 cgaaggcatc agtccaattt gtgttctgtt cgcgcacaaa ctcggaccag cgtttcacgt
     1621 cctcgtctgt gtagtcttcg cggcgcaggc ggagatatcc ataatcggca gtaatgttct
     1681 tcggagtcgc gatggtgtcc gtatccgcga tgcagagggc gatgttgcgc gacttgagca
     1741 gatcgaagat atcgtcggcg aaccaagagt cgtgacggaa ttcaaacgcg gcgcgcatgg
     1801 caggaaattc ccgcagaaac gaactcaata catcggcatc cttcttgaag gtcggcggca
     1861 attgaaataa aaccgggccg agtcgttcgc cgaggccact aacaactttg cagaaatatt
     1921 caagtgtatc gacgcaatcg cgcagcttcg accaatgcgt gattttctgc ggcgctttta
     1981 acgcaaatcg gaatttctcc ggtgtttgag ctttccagtt atcgatcgtt ttcggcgcag
     2041 gaattcgatg aaacgtataa ttgacctcag tcgtaggaaa tcgctcggcg taaaaagaca
     2101 gcatcttcgc tgcgggtaag tcttccggat aaaaacttcc cttccattcc gcgtactgaa
     2161 atcctgatgt cccaatccac aacttcatat caagcattca cggtaagagt cggctagcag
     2221 aaccaggctt caaccaacgc aacgaacttt ttcaaacatc cgtggagcat gccgcatccg
     2281 aatcgatggt aacggcaagt ttttggagcc tcgaactaat agaaacagag gacgttcaat
     2341 acttgccgca actcaacaaa aagggaaaaa acatgaaaaa attgctatta agcatggcgt
     2401 tggcagttgt tgcgccgttc gcatgggcac aggtctcgca gaccacgaca acgaccacga
     2461 ctgagggcag cgggacgatc acggagtact ctccgggcag tcagatcgtt ctgagggaga
     2521 ccagcggacc gcgcacttat cgcttcggca agacggttac atatgtgacc agaagcggca
     2581 aggtcttgga cccagatgtg gtaaagacta agatcaaagt cggggtacca gtccgcgtcc
     2641 attatgtcgg aacaggcgac agcatgatgg ttgatcgcgt aatcgtggac gaagattaat
     2701 aattagtctc gttcgtctcc aacgcgcctt tctgttctgc catgtgcgaa cagtaaaggc
     2761 gcgtattttt tgcccaaggg ggactgagct gaaaaacctg aagaccaatg gccatgtgaa
     2821 acacgaattg tctgtgttat gaagctacaa atgaagggga gctggaacga aattaagggc
     2881 aaactaaagc agaaatacgg tcagctgact gacgacgatc tgacctttgc cgacggcaag
     2941 gaggacgagc ttctgggtcg cctacaaaag agattgggca gaacaaaaga cgaacttcga
     3001 tccgagattg aggagatgta attgtatcag cgatctcggg acgtcc
//
LOCUS       DATDAJ010000278         4141 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1575002, whole genome shotgun sequence.
ACCESSION   DATDAJ010000278 DATDAJ010000000
VERSION     DATDAJ010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4141)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4141
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1575002"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2619)
                     /gene="treS"
                     /locus_tag="VIS53_06950"
     CDS             complement(<1..2619)
                     /gene="treS"
                     /locus_tag="VIS53_06950"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HEY5767556.1"
                     /translation="MAQGDTNTSVDPLWFKDAIIYELHVKTFCDSDGDGMGDFRGLME
                     KLDYVQELGVTAIWLLPFYPSPMRDDGYDIADYFDVNPNFGTLDDFRAFLDAAHDRNL
                     RVITELVINHTSDQNPWFQKSRRAVARYGPVTADEDRGARMTGVADPGHSDDDLAYKD
                     FYVWSETPEKYKDARIIFKDFETSNWAWDPLAKAYYWHRFYSHQPDLNFDNPAVHDAV
                     KKVCDFWLSMGVDGLRLDAIPYLYEREDTNCENLPETHKYLQELRAQVDAKFPNRMLL
                     SEANQWPEDAAAYFGKGDEAHMNFHFPLMPRMFMALQMEDRFPIIDIMEQTPAIPENC
                     QWAMFLRNHDELTLEMVTDEERDYMYRVYATDPHARINLGIRRRLGPLLANNRRKIEL
                     LNTLLFSMPGTPIIYYGDEIGMGDNFYLGDRNGCRTPMQWSPDRNAGFSRANPQQLYL
                     PVTIDPEYHYEAVNVENQQKNLSSLLWWTRRVIAMRKNFKALSRGSLEFLSPDNPKVL
                     AFLRRFENETIVMVANLSRFSQSAELDLSRFAGCVPMEVFSRNLFRPIRKTHYVITLG
                     PHAYYWFALQAPIDTRRASKKHVVPTIKAPAQLDVLLGNSQREQFERDVLPNHIQNSR
                     WFGSKARSFRNLKVTEQLAFSADADGARLWFIDVNYLDAPTERYAIPVKIAAGETAQS
                     ITQNASHAIVAHFGRRNGAILCDAIWDAAFRLQLFEAIVRHRTLTAQAGQFVGLTTSG
                     FELRDVNVSANSHVLSAEQSNSSMLFDNKFFLKLYRKLEDGVNPDVEITRFLTEKTDF
                     PNVPAFVGALEYRRPKAEPTVVCLLQRAIANEGNVWTLTVDALGRYYERVLERKGDFQ
                     SETALPGALLEELVGGV"
     gene            2819..3439
                     /locus_tag="VIS53_06955"
     CDS             2819..3439
                     /locus_tag="VIS53_06955"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767557.1"
                     /translation="MPHSGVGAHTIAPPLEPGAPNDFDLMKGIQAGDADALSQLYDRY
                     NGILKALILRVIHNEAEADDLLQEIFMEIWNQAKNFSEQKGKPLGWMVTLARRRAIDG
                     LRKKQAYARAEERLQNETEQQPDAWVHNATEEEIVLGDTRVLIRKVISSLPPAQQQAI
                     DLAFFRGMSQREIAAKTNTPLGTVKTRLELGLKKIYDGLKDLKDEL"
     gene            3429..3665
                     /locus_tag="VIS53_06960"
     CDS             3429..3665
                     /locus_tag="VIS53_06960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767558.1"
                     /translation="MNFEQFQNQSRLYVIGALDPEELEEFEQARKKFGKKAEDFISKC
                     YALHEAFALSLRPAKSSDAIKERLMTMVKAKKQA"
     gene            complement(3685..>4141)
                     /locus_tag="VIS53_06965"
     CDS             complement(3685..>4141)
                     /locus_tag="VIS53_06965"
                     /inference="COORDINATES: protein motif:HMM:NF020989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2017 family protein"
                     /protein_id="HEY5767559.1"
                     /translation="SDLDPFLAELLRQIPASANTDGAPAAEQRIFSLPINGKETELCA
                     EWKMYVEPELRRLFQTATQTVGADLEQLNGNEQSLANRTLRIPTKHADAWLSALNQAR
                     LVIAAKNNFTELELSDHLRSPIGSRRDLSLFQVNFYGFLQEFILRELDC"
BASE COUNT          971 a         1119 c         1128 g          923 t
ORIGIN      
        1 cacgccgcct acgagttcct cgagaagagc accgggcagc gctgtttcac tttgaaaatc
       61 gcctttgcgc tccaacacgc gctcatagta gcggccgagg gcgtcgaccg tgagcgtcca
      121 aacgttgcct tcattggcga tcgcgcgttg caggagacaa acaaccgttg gctccgcctt
      181 tggccggcga tattcgagcg ctccgacgaa agctggcacg tttggaaaat cggttttctc
      241 cgtcaggaac cgcgtgattt ccacgtcagg gttcacgccg tcctcgagtt tccgatagag
      301 tttcaggaaa aatttattgt caaagagcat tgaagaattg ctctgttccg cgctaagaac
      361 gtgcgagttg gcggagacat taacgtctcg caactcaaaa cccgaggttg tgaggccgac
      421 aaattgtcct gcctgagctg ttagtgtgcg atgccgcaca atggcctcga acaattgcaa
      481 acgaaacgcc gcgtcccaaa tggcatcaca caggatggcg ccattccttc gtccgaaatg
      541 cgctacgatc gcatgcgacg cgttttgcgt aatggactgc gcggtttcgc ccgcggcaat
      601 ctttaccggt atggcgtacc tttccgtcgg agcatccaga taatttacgt cgatgaacca
      661 gagtcgcgcg ccatcggcat cagccgaaaa agcgagctgc tctgtcactt ttaggtttcg
      721 aaagctgcgc gctttggaac cgaaccagcg ggaattctgg atatgatttg gaagaacgtc
      781 gcgctcgaac tgttctcgct ggctgttgcc aagcaggacg tccaactgag ccggcgcctt
      841 gatggtcggg acaacatgtt tctttgacgc gcggcgcgtg tcgatcggcg cttgcagcgc
      901 gaaccagtaa taggcgtgcg ggccgagtgt aatgacgtag tgcgttttcc tgatcggccg
      961 aaatagattg cggctaaaaa cttccatcgg cacgcaaccc gcaaaacgcg agagatccag
     1021 ctcggccgac tgtgagaagc gcgaaagatt tgccaccatc acgatcgtct cgttttcaaa
     1081 gcggcgaagg aacgccagca ctttcggatt gtccgggctc aaaaattcaa gagagccacg
     1141 cgacaacgcc ttgaagtttt tccgcatggc gattacgcga cgtgtccacc acaacagtga
     1201 cgaaagattt ttctgctggt tctcgacgtt gacggcttcg tagtgatact cgggatcgat
     1261 cgtgaccggc agataaagct gttgtggatt cgctcttgaa aatcccgcgt tgcggtccgg
     1321 gctccattgc atcggcgtgc ggcaaccgtt gcgatcgccg aggtaaaaat tgtcacccat
     1381 tccgatctca tcgccgtaat agatgatggg cgtgccgggc atggagaaca gtagcgtgtt
     1441 gagcagctca atttttcggc ggttattcgc aagcagcggt ccaagccgcc ggcggatgcc
     1501 aagattgata cgagcgtgcg gatcggtcgc gtaaactcga tacatgtagt cccgttcctc
     1561 gtcggtgacc atttccagcg ttagctcgtc gtggttgcgc agaaacattg cccactgaca
     1621 attctccggg atcgccggcg tctgctccat gatatcaata atcggaaacc ggtcctccat
     1681 ctgaagcgcc atgaacatgc gcggcataag cgggaaatga aaattcatgt gtgcctcatc
     1741 accctttcca aaatatgccg cggcgtcctc cggccactga ttcgcctctg aaagcagcat
     1801 tcgattcggg aatttcgcgt ccacctgagc gcgaagttcc tgaagatact tgtgtgtctc
     1861 gggaagattc tcgcaattcg tgtcttcccg ttcgtaaaga tacggaatgg cgtcgagtcg
     1921 aagtccatcg acgcccatcg acagccagaa atcgcagact tttttcaccg cgtcgtgcac
     1981 cgctggattg tcgaaattca ggtccggctg atgtgagtaa aagcgatgcc aatagtaggc
     2041 cttcgccaac gggtcccatg cccagttgga tgtctcgaaa tctttgaaaa tgattcgagc
     2101 gtccttgtat ttttccggcg tctcgctcca gacataaaag tctttataag caaggtcatc
     2161 atcgctgtga ccggggtcgg cgactccggt cattcttgcg ccgcggtcct catctgcggt
     2221 tacaggaccg tagcgtgcga ctgcgcgtcg cgatttttgg aaccacggat tttgatcgga
     2281 tgtgtgattg atcaccaatt cggtgatcac acgcagattc cgatcatgcg cggcgtcgag
     2341 aaaggcccgg aaatcatcga gcgtgccgaa attcggattt acgtcaaaat aatcggcaat
     2401 gtcgtagccg tcgtcgcgca tcggagacgg ataaaacggc agcaaccata tggccgtgac
     2461 gccgagttct tgcacataat ccagcttctc catgagcccg cgaaaatcgc ccatgccgtc
     2521 gccatcgctg tcgcaaaatg ttttaacgtg cagctcgtag atgatggcgt ccttgaacca
     2581 aagcggatcg acggatgtat tggtatcccc ctgtgccatg ggattaactc ttgacgcacg
     2641 aaacgtgcag cgcaattgat cgattttgca tctttcgaaa ccaatgcgtc cgttcagctt
     2701 aacacgcccg attaccgtat cagtgctcga tcccttttgt tgacgccagt ttttatcacg
     2761 catggaacgt tcggaactaa cttcttctat caagcggaaa ccaaagaaac gcggccgaat
     2821 gccacattcg ggcgtgggag cgcatacgat cgccccgcca ctcgaacccg gagcgccgaa
     2881 cgacttcgat ttgatgaagg gcatccaggc cggcgacgcc gatgcgttgt ctcagctcta
     2941 cgaccgctat aacggcattc tgaaggcgct gatcctgcga gtcatccaca acgaggctga
     3001 ggccgacgat ctcttacagg agattttcat ggagatctgg aaccaggcga aaaatttctc
     3061 cgagcaaaag ggcaaaccgc taggctggat ggtgacactc gcccggcgac gggccatcga
     3121 tggcctgcgc aagaaacagg cttacgcacg cgcagaggaa cgcctgcaaa atgaaaccga
     3181 acagcagcca gatgcatggg tgcacaacgc caccgaagaa gaaattgtgt tgggcgatac
     3241 gcgcgtgctg atccgcaagg tgatcagcag cctgccacct gctcagcaac aggcaatcga
     3301 cctcgcattt tttagaggca tgagccagcg cgaaatcgca gcgaaaacga atacaccatt
     3361 gggcaccgta aagacgcggc ttgaattggg cctgaaaaaa atatatgacg gcctcaagga
     3421 cctgaaagat gaactttgag cagtttcaaa atcagtcccg actttacgtg atcggcgcgc
     3481 tcgacccgga agagctcgag gagttcgagc aagcgcggaa gaaattcggg aaaaaagccg
     3541 aagacttcat cagcaaatgt tatgcattgc acgaagcatt cgcgttgagc ctgcgtccag
     3601 cgaagtcgtc cgacgccatc aaagaacgcc tcatgacgat ggtaaaggcc aagaagcaag
     3661 cctgattgct gcccttcctc ctcctcagca gtctagctcc cgcaggataa attcctgcag
     3721 aaagccgtag aagtttacct ggaacaagct caggtcgcgg cgggatccaa tcggtgagcg
     3781 aaggtggtcg ctcagttcca gctcggtaaa attgtttttt gcagcgatga caagccgggc
     3841 ctgattcagc gcgctcaacc acgcgtcggc atgttttgtc ggaatgcgca gagtgcggtt
     3901 tgcgagactt tgttcgtttc catttagttg ctccagatcg gcgccgaccg tctgcgtcgc
     3961 cgtctgaaat agacggcgca attcaggttc tacatacatt ttccactcag cgcatagttc
     4021 cgtctctttt ccgtttatcg ggaggctaaa gatacgttgt tcggcggcag gcgcgccgtc
     4081 cgtgttggcg cttgcaggaa tttgccgaag caattcggca agaaacgggt caaggtcgga
     4141 g
//
LOCUS       DATDAJ010000279         2268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1576476, whole genome shotgun sequence.
ACCESSION   DATDAJ010000279 DATDAJ010000000
VERSION     DATDAJ010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1576476"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1047
                     /locus_tag="VIS53_06970"
     CDS             <1..1047
                     /locus_tag="VIS53_06970"
                     /inference="COORDINATES: protein motif:HMM:NF017505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008430 - selenium binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenium-binding protein SBP56-related protein"
                     /protein_id="HEY5767560.1"
                     /translation="KPEIVKVIEPEEVFARTNYSRPHTIHCGPEAIYVSALGDPNGEG
                     PGGIFMLDCETFDVLGQWEVDRGDQFLHYDFWWHLGFDTLLSSEWGTPNMIENGVQPD
                     LLLGGKYGHQMHVWDLRRRRHLQTLDLGNEQQMVLEMRPAHDPRKAYGFVGVVVSLKD
                     LSASIWLWHRDNGQWDVKKVIEIPAEPAEPEKLPAMLKDFKAVPPLVTDINLSLDDKF
                     LYVSCFGTGEFLQYDVSDPFNPKKTGSVRIGGIANRAPHPKKPDQPLAGGPQMVEVSR
                     DGKRIYFTNSLYAAWDEQFYPDGVGSWMVKLDASPNGGISFDENFFLESNDYRVHQVR
                     LEGGDSSSDSFCFP"
     gene            1044..1697
                     /locus_tag="VIS53_06975"
     CDS             1044..1697
                     /locus_tag="VIS53_06975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767561.1"
                     /translation="MSELWPWLAVFGLGMFHGINPAMGWLFAVALGLQEQKRAAVLRA
                     LPPMVLGHALSVGIIIAVVLLARVTVPHRTLKIAAATILFAFGLYRLLRSRHPNWVGM
                     RVGFGDLTLWSFIMASAHGAGLMLVPFFLPSQAAAESHHHDSHQMHAWAFANFSAPSL
                     LTTAVVIHTLGYLLTTALVAIVVYEKLGVAILRRAWFNIDFVWMLALMITGVFILLF"
     gene            1908..>2268
                     /locus_tag="VIS53_06980"
     CDS             1908..>2268
                     /locus_tag="VIS53_06980"
                     /inference="COORDINATES: protein motif:HMM:NF014611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY5767562.1"
                     /translation="MQVGKAARRVKILTTIADAQAQPCAKPRVLVPTMGALHKAHGEL
                     IRVAREAAGADGEVAVSIFVNPLQFEPGSDYKRYPRPEKADEEFCRSAGIDLLFRPSA
                     NQVYATDRSTFVEEASLS"
BASE COUNT          463 a          610 c          656 g          539 t
ORIGIN      
        1 aaaccggaga tcgtcaaagt tatcgagccc gaggaagttt ttgcgcggac caactattcg
       61 cgtcctcaca cgattcactg tggtccggaa gcgatttacg ttagcgcgct cggagatccc
      121 aacggcgaag ggccaggcgg catttttatg ctcgattgcg agacgttcga tgtcctcggt
      181 caatgggaag tcgaccgcgg cgatcagttt ttgcattacg atttttggtg gcacctcggg
      241 ttcgacacgt tactcagcag cgagtggggc actccgaaca tgatcgagaa cggagttcaa
      301 cccgatctct tgttaggcgg taaatacggg catcaaatgc atgtctggga tctgcgccgg
      361 cggcgacacc ttcagacgct cgatttaggt aacgagcagc aaatggttct cgagatgcga
      421 cccgcacatg acccgagaaa agcttacgga ttcgtcgggg tggtggtttc gctgaaagat
      481 ttgtccgcgt caatttggct gtggcatcgg gacaacggcc agtgggacgt gaagaaagtt
      541 atcgaaattc ccgccgaacc ggcggagccc gaaaaactcc cggctatgct caaggatttc
      601 aaagcggtgc cgccactcgt gacggacatc aatttatccc tggacgacaa gtttctttac
      661 gtctcgtgct ttggaacagg cgaatttttg caatacgatg tatcggatcc attcaatccg
      721 aaaaagaccg gctcggtgcg cattggcggc atcgccaatc gggcgccgca tccgaagaag
      781 ccggatcagc cgctcgcggg cggcccgcaa atggtggaag taagccgcga cggcaagcga
      841 atctatttca ccaactcgct ttatgccgca tgggacgagc aattttatcc cgacggcgtc
      901 ggcagttgga tggtgaaact tgatgccagt cccaacggcg gcatcagctt tgacgaaaac
      961 tttttcctgg agagcaacga ctaccgcgtt catcaagttc gcctcgaagg aggcgattcc
     1021 tcgagcgatt ccttctgctt tccgtgagcg agctttggcc gtggctggcg gtcttcgggc
     1081 tcggcatgtt tcacgggatt aatcctgcca tgggatggct gtttgccgtc gcgcttgggt
     1141 tgcaggagca aaagcgcgca gcggtactcc gtgcgctgcc gccgatggtg ctggggcacg
     1201 cgctttcggt cgggatcatt atagccgtgg ttcttctggc ccgtgttacc gttccgcatc
     1261 gcactctgaa aattgccgcg gccacgatcc tgtttgcctt cggtttgtat cgcctactgc
     1321 gttcgcgtca tccgaactgg gtgggaatgc gagtcggctt cggcgatttg acgctttggt
     1381 cttttataat ggcgtccgcg cacggcgcag gactgatgct ggtcccgttt tttctgccat
     1441 cgcaggctgc ggcagagtcg catcaccacg acagtcacca aatgcacgct tgggcattcg
     1501 cgaatttcag cgcgccttct ctgctcacca ccgcggtcgt tatccacacg ttagggtatc
     1561 ttctaaccac cgcgctggtc gcgattgtgg tttacgaaaa acttggggtc gcgatcctgc
     1621 gccgtgcgtg gttcaacatc gatttcgtct ggatgctcgc gctgatgatc actggcgtct
     1681 ttatcctgct cttttgattt cggttgaacc ctactatttc gtgattcgca ccgtacaagc
     1741 ggtccgataa tgtcattctg agcgaagcga agaatctcgg attaactttg gaccaattcg
     1801 cccgagcgga atacatcaga gatgtttgaa agcctggcct catgcttcac atttcgttgc
     1861 agcgctccgc tcaacatgac agagctattc attgagatga gttccagatg caggtgggta
     1921 aagctgcgcg ccgtgtgaaa attctgacca ccatcgcaga cgcacaggcg cagccatgcg
     1981 caaaaccgcg tgtcctcgtg ccgacgatgg gcgcgttgca caaggcgcat ggcgaattga
     2041 tccgggtggc gcgcgaggcg gcgggcgcag acggcgaagt ggctgttagc atttttgtta
     2101 atccgctcca gttcgagccg ggcagcgatt acaagcgata cccgcgtccg gaaaaagcag
     2161 acgaagaatt ttgccggagc gcgggcatcg atcttttatt tcgtccgtca gccaatcagg
     2221 tttatgccac cgaccgctcg acgttcgtgg aagaggcttc gttgtcga
//
LOCUS       DATDAJ010000280         5463 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1596724, whole genome shotgun sequence.
ACCESSION   DATDAJ010000280 DATDAJ010000000
VERSION     DATDAJ010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5463
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1596724"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /locus_tag="VIS53_06985"
     CDS             <1..1074
                     /locus_tag="VIS53_06985"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY5767563.1"
                     /translation="GPHIDWKPTEWWDHKLIVACDHERQINEPNEDGFVGATRAVFER
                     TQVDYQNDLRPVAWLTLTSGFYYSRINAGQERPFVLFGPTFISDHIDETAGFLEATLT
                     PVEDLVFVAGGRFDHFNQFGGIWTYRFAGSYKIDKTNTILHSSLGTGFSPPSSQDKIF
                     GNNFGLKPEEDLGWDIGIRQQLWQNRVDVGLTYFHNDLSNVIGFNGLFDTLNLGSAET
                     QGLEAELHAQPIPNCVLTAAYTYLEAEKTSSKDVSQLQGARLPRRPRNELYVSASYLW
                     WKRLRTVVEAKFVNAREELNFGGPNFDIEDYSFVNIAAEYEVNPHFSIFGRIDNLANE
                     HYSEVFGFPALGRAAYGGVKVRF"
     gene            1145..1993
                     /gene="proC"
                     /locus_tag="VIS53_06990"
     CDS             1145..1993
                     /gene="proC"
                     /locus_tag="VIS53_06990"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEY5767564.1"
                     /translation="MSPELSDKKLAVLGAGKLGGILLRAYLKQGLFVSNRVIATVKHA
                     ERAAALANELGIAVTTENREAVKGADIILLTIKPQTVAEVLQEIAPEIGADTLVVSVA
                     ASVPAGFVEQQLAVATNGKRDKVPVVRAMPNTPAAVDCGMTAICGGTHASPHHLDVAR
                     TMFDAVGRTILLDEKHMDAVTGLSASGPAFAYIILESLAEGGVKVGLPREVATLLAAQ
                     TMKGAASVVLETGDHPALLKDAVTTPAGCTIDGILELEEGKLRVTLIKAVVKATSRAG
                     ELLFEK"
     gene            2054..3253
                     /gene="rmuC"
                     /locus_tag="VIS53_06995"
     CDS             2054..3253
                     /gene="rmuC"
                     /locus_tag="VIS53_06995"
                     /inference="COORDINATES: protein motif:HMM:NF014680.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEY5767565.1"
                     /translation="MSPLLYLAIGLVGGGLVVALVVLVTRRRNQAAATDLAKRLETID
                     RSLRDEFSRNREEAGAAAKNQREELARSLEGVRSIVDVRLRQLQDDNAQQIDKMRATV
                     DEKLQGTLEKRLGESFKLVSERLEQVHQGLGAMRQLASDVGGLQRVLTNVKTRGGWSE
                     WQLGVLLDEMLTPEQFAKNIKMRDDTDERVEFAIKLPGDENGAPVWLPIDAKFPMEHY
                     DRLAGAQEKGDPAAVESAIKTLETQLKRCAKDICEKYINPPKTTDFALLFLPSEGLYA
                     EAIRRVGLVQNVQRDCRVTFVGPTTLAALLNSLQMGFRTLAIQKRSSEVWNLLAAVKT
                     EFGKFGDSLSAVKEKIDQASRKMEDVDVRSRAITKKLRDVEELPSNPQPLLKDFLQTD
                     NADTPDE"
     gene            3257..3949
                     /locus_tag="VIS53_07000"
     CDS             3257..3949
                     /locus_tag="VIS53_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5767566.1"
                     /translation="MKTVLITGANKGIGHEVARQLAAKGFHVFVGARYAKAGRKATEE
                     IAKKCGKATFLEIDVADNDSVTTAAREFSNIEDHLDVLVNNAGIIVDGDDAILEISDD
                     LFRNTLETNTLGALRVTRAFAPLLRKSKSPRVINVSSGGGQLTGGADGWAPAYCISKT
                     ALNGVTVQLAAALPKFAVNSVCPGWVRTEMGGENASRSVEEGAETIVWLASEAPQDLT
                     GKFLRDRKEIPW"
     gene            complement(3960..4583)
                     /locus_tag="VIS53_07005"
     CDS             complement(3960..4583)
                     /locus_tag="VIS53_07005"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5767567.1"
                     /translation="MASATYKAFCGGIFETNCYLFEAPDGWILFDAPEGACQWVRSLN
                     IHPKLLLLTHGHVDHVQDVARVKQQFHSQIGCHPLTAPMIADRDFFRNFGFALEIEPV
                     EPDFLIEQTPNRSLLGTEFQILEVPGHCPGSLCFFSRKNRLLIGGDVLFAGSIGRGDL
                     PGGDIDLLINGIREKLFALGDDVTVLSGHGPPTTIGQERLSNPFLQA"
     gene            4709..>5463
                     /locus_tag="VIS53_07010"
     CDS             4709..>5463
                     /locus_tag="VIS53_07010"
                     /inference="COORDINATES: protein motif:HMM:NF037004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767568.1"
                     /translation="MRSSLQRSLALCTILFAAALAAPPAPASSRETVAMSVGRLLEEG
                     HYTRQKLSEEVSKKFLQTYLELLDYSHLFFTQEDVDAVTKKYANAMAGDVLMGTLKPG
                     YEIYALYTKRVDERVAKIKELLKQPIDFKSNATVELSRQKSPWPKNEAETDQLWRGRI
                     ANELLQEHLSEHPIEPAPQLVSRRYERLARNVHEQDKDEQMKLYLDALAQAYDPHSEY
                     LSKADMKNFSINMGLSLVGIGAMLRSEDGYAKI"
BASE COUNT         1299 a         1430 c         1588 g         1146 t
ORIGIN      
        1 gggccgcata tcgattggaa accgactgag tggtgggacc acaagctcat cgtcgcttgc
       61 gatcacgagc gccaaatcaa cgagcctaac gaggatggat ttgtcggggc gacacgcgcc
      121 gtgttcgaac ggacgcaggt tgattaccaa aacgatcttc gaccggtcgc gtggttgaca
      181 cttacctcag gattttacta cagccgtatt aatgcgggcc aggagcgacc gttcgttctg
      241 tttggaccaa cctttatcag cgatcacata gacgaaaccg cgggatttct ggaggccacg
      301 ttgacgcccg tcgaagactt ggtcttcgtc gctggcggac gtttcgatca cttcaatcaa
      361 ttcggtggca tttggaccta tcgttttgcc ggcagttaca aaatcgacaa gacgaacacc
      421 attctacatt ccagcctcgg tactggcttc agtccgccaa gcagtcagga caaaattttt
      481 ggaaacaact ttggcctgaa acctgaagag gacctcggtt gggacatcgg tatcagacag
      541 caactctggc aaaatcgcgt ggacgtgggc ctcacctact ttcacaacga tctctcgaac
      601 gtgattgggt ttaacgggct ttttgacacg cttaatcttg gttctgccga aacccagggg
      661 ttggaagcgg aactgcacgc ccaaccgatt cccaattgcg ttttgacggc tgcttacacc
      721 tacctcgagg cagagaaaac ctcctccaaa gatgtttcgc agttgcaagg cgctcgtctg
      781 ccgcgtcgcc cgcgcaatga gctttacgtt tcagcgtcat atctctggtg gaaaaggctg
      841 cgaacggtgg tcgaagcaaa gttcgtcaac gcgcgcgagg aattaaattt tggcggacca
      901 aatttcgaca tcgaagacta ttcgtttgta aacatcgccg cggaatatga ggtaaacccg
      961 cacttctcaa tctttggtcg tatcgataac ctagccaacg agcactattc ggaggtcttc
     1021 ggtttccccg cgctcggccg cgccgcgtac ggtggcgtga aggtacgatt ttagagtagc
     1081 gcgagcctcc cggctagcga gttcatcgag tcacaagcga gacgcatgtg ctactctatt
     1141 caccatgtcg ccggaacttt ccgacaaaaa actggcggta ctcggtgccg gcaaattggg
     1201 tggcatcctg ttgcgggcat atctgaagca gggactgttt gtgtccaatc gggtcatcgc
     1261 gactgtaaag cacgcggaga gagcagccgc gctcgcgaac gagctcggca ttgcagtgac
     1321 caccgaaaat cgcgaagcgg tcaaaggcgc tgacatcatt ttgctgacaa taaaaccgca
     1381 aaccgttgcg gaagtgttac aggagatcgc tcccgaaatc ggcgccgaca cgctggttgt
     1441 ctccgtcgcg gcctccgtgc cggcgggctt cgtcgagcag caactcgccg tggcgacaaa
     1501 cggcaagcgc gacaaagtgc cagtcgtaag agcaatgcca aacactccgg ccgcggttga
     1561 ctgcggcatg acggcaatct gtggcggtac tcatgccagc cctcatcatc tcgacgttgc
     1621 tcgcaccatg ttcgatgcgg tcggccggac gattctcctt gatgagaagc acatggacgc
     1681 ggttacaggt ctttctgcga gcggcccagc ctttgcatac atcattcttg agtcgctggc
     1741 cgaaggtggc gtgaaagttg gtttgccgcg cgaggtagcg actctcctcg cagcgcagac
     1801 gatgaagggt gcggcgagtg ttgtgttgga aaccggcgat caccccgcgc ttctcaagga
     1861 cgccgtgact actccggcgg gctgcaccat cgacggcatt ctcgaactcg aagaaggcaa
     1921 actccgcgtc acgctcatca aggcagtcgt gaaagccacg agtcgcgccg gcgagctgct
     1981 gttcgaaaaa tagtcgtggg cgtcgtcgcc ttgtcattcc gagcgaagtc gaggaatttg
     2041 ctacgtgttt aacatgagtc cgctgcttta cctcgcgatc ggattggtcg ggggcgggtt
     2101 ggtcgtcgcc ctggtcgttc tggtaacacg gcgtcgaaat caggcggcgg caacagacct
     2161 ggcgaagcga ttggagacga tcgatcgcag cttgcgcgac gaattttcgc gcaatcgcga
     2221 ggaagcaggc gcggcggcga agaatcagcg cgaggaatta gccagatctc tggaaggcgt
     2281 cagatcgatt gtggatgttc gactgcggca attgcaggac gacaacgcac aacagatcga
     2341 taagatgcgt gcgacagtcg acgaaaagtt acagggcacg ctcgagaagc gattgggcga
     2401 atctttcaag ctggtcagtg agcggctgga gcaagtgcat caggggctcg gtgcaatgcg
     2461 gcagttggcc agtgacgttg gtggattaca acgtgtgctc acaaatgtga aaacgcgagg
     2521 tggctggagc gaatggcaac tcggcgttct cctggacgaa atgcttactc ccgagcagtt
     2581 cgccaaaaac ataaagatgc gcgacgacac tgacgagcgc gtcgagtttg cgatcaaatt
     2641 gcccggcgac gaaaacggcg cgccggtctg gttgccgatc gatgcgaaat ttccgatgga
     2701 acactacgac cggctggcag gggcgcagga gaaaggcgat cccgcagcag tcgaaagcgc
     2761 gatcaaaact ttggagactc aattgaagcg ctgcgccaaa gacatttgcg agaagtacat
     2821 taatcccccg aagacgacag attttgcgct gctgtttctg ccaagcgaag ggctttacgc
     2881 ggaagcgatc cggcgcgtcg gtttggttca aaacgtgcag cgcgattgtc gcgtcacatt
     2941 tgtgggaccg acgacgctcg cagcattgct caatagtttg cagatgggtt ttcgcacgtt
     3001 ggccatccaa aagcgctcca gcgaagtctg gaacctgctc gcagcagtga agaccgagtt
     3061 cggcaaattc ggcgattcgt tatcggcggt aaaggagaag atcgaccagg catcgcgcaa
     3121 aatggaagac gtcgatgttc gctcgcgcgc gatcacaaag aaattgcgcg atgtggaaga
     3181 attgccgtcg aatccgcagc cgttgctgaa ggattttttg caaaccgaca atgcggacac
     3241 gcccgatgaa taagacgtga aaaccgtatt gattaccggc gcgaacaaag gcattggcca
     3301 cgaagtcgcg cgacagctcg cggccaaagg atttcacgtg ttcgtcggcg cacggtatgc
     3361 aaaggctggt cgcaaagcga cggaggaaat cgcaaagaaa tgcggcaagg cgacattttt
     3421 ggaaatagac gtcgccgaca atgacagcgt cacaaccgcc gcgcgtgaat tctcgaacat
     3481 cgaggatcat ctcgatgtgc tcgtgaacaa cgcagggatc attgtcgacg gagacgatgc
     3541 aattttagaa atcagcgacg acctctttcg aaatacactg gagacaaata cgcttggcgc
     3601 gctgcgcgta actcgcgcgt tcgcgccgtt actccgaaaa agcaaatcgc cgcgcgtgat
     3661 caatgtctcg agcggcggcg gtcaactgac cggcggcgcg gatggttggg cgccggctta
     3721 ctgcatttcg aagaccgcgc tgaatggcgt gacagtgcag ctcgcagcgg cgttgccgaa
     3781 attcgccgtg aattcggtgt gccccggttg ggtgcggacg gaaatgggcg gcgaaaacgc
     3841 gagccgctca gtggaggaag gcgcggaaac gattgtatgg ctggccagcg aagcgccgca
     3901 ggatctcacc ggtaagttcc tgcgtgatcg caaagagatt ccgtggtagc ccgccttctt
     3961 tatgcctgca gaaatggatt tgagaggcgt tcttggccga ttgttgtcgg cggtccgtgg
     4021 ccggagagca cagttacatc gtcccctagc gcaaacagct tttccctgat cccgttgatt
     4081 aggagatcga tatcgccgcc gggcaaatca ccgcgaccaa tgctgccggc gaaaagaacg
     4141 tcgccaccaa tgagtaagcg gttcttgcgc gaaaagaaac aaagactgcc ggggcaatgg
     4201 ccgggcactt ccagaatctg gaactcggta ccgagaagac ttcggtttgg tgtttgttcg
     4261 atgagaaaat ctggttcgac tggttcgatt tcgagcgcga acccgaagtt gcggaagaaa
     4321 tcgcgatcag caatcatggg cgcggtaagc gggtgacatc cgatttggga gtgaaactgc
     4381 tgtttaaccc tggcaacgtc ttggacgtga tcgacgtgcc cgtgtgttag cagcaaaagt
     4441 ttgggatgga tattaaggga acgcacccat tgacacgcac cctcaggtgc gtcgaacagt
     4501 atccatccgt ccggcgcttc gaacagatag caattggttt caaagatccc gccgcaaaac
     4561 gctttataag tcgcagatgc cattgtaacg aagtttttga atgttcagcg ccgtcgattg
     4621 tctacttcta cccaacaatg ccgattttgt ctcgtcgtct tgcgccgtgc gctgaattct
     4681 gcgaatgtct taaacctctt ttttaccaat gagatcatct ttgcaacgat cacttgccct
     4741 ttgcacgatc ctttttgcgg ccgcgcttgc ggctccgccc gcgccggcga gttcgagaga
     4801 aacggtggcg atgtccgttg ggcgactcct ggaggaaggc cattacaccc ggcaaaaact
     4861 gagcgaagag gtttcgaaaa aattcctgca gacgtatctg gagctgctcg attacagcca
     4921 tctctttttc acacaggaag acgttgatgc cgtcactaag aagtatgcca atgccatggc
     4981 cggggacgtt cttatgggaa cacttaagcc cggctacgag atttacgcgc tatacacgaa
     5041 gcgcgttgat gaacgggtgg cgaaaataaa agagctgttg aaacagccga tcgatttcaa
     5101 aagcaatgcg acggtcgaat tgagccgtca aaaatcgccg tggccgaaaa atgaggctga
     5161 aaccgaccaa ctctggcgcg gccggatcgc aaacgaactg cttcaggagc atttgagcga
     5221 gcatccgatt gagcccgcgc cgcaactcgt ttctcgccgc tatgaacgtc tggcccggaa
     5281 tgttcacgag caggacaaag atgagcagat gaaactttat ttggatgcgc tcgctcaggc
     5341 ttacgacccg cactcggaat acctgagcaa ggccgacatg aaaaatttca gcattaacat
     5401 gggcctctcg ctcgtgggca ttggcgccat gcttcgctcc gaagatggct acgcgaaaat
     5461 cga
//
LOCUS       DATDAJ010000281         3533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1598028, whole genome shotgun sequence.
ACCESSION   DATDAJ010000281 DATDAJ010000000
VERSION     DATDAJ010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3533
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598028"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1607
                     /gene="dnaA"
                     /locus_tag="VIS53_07015"
     CDS             246..1607
                     /gene="dnaA"
                     /locus_tag="VIS53_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEY5767569.1"
                     /translation="MDKKCAQLWQRLSAALKPQISADSFKRWFSTVELVEAKEKSITL
                     TVPNNIYQLWIESNYMPALQNAIVVAFGGPRLVKFCGPSTASAQPSAEDLATVKEALP
                     APQVDARSGATVPGLNPRNTFESFVVGPNNEIAHAASLAVAQAPARTYNPLFVYGGVG
                     LGKTHLMQAIGQFVWAKRKNMKVIYVSSELFINEFIDAIQHSNLVKFRKRYRQADLLL
                     IDDIQFLGGKERSQEEFFHTFNTLFDGHKQIVLSSDRPASEIANLEHRLVSRFEWGLT
                     AELQPPDIETRLAILRKKANAMQIKLHEDVFQFLATRIRTNVRRLEGALMRVASFASL
                     SGRELTNETVEHLLKDILQEEGRQSITIEQIQRRVAEHFDVRLADMTSKRRPASIAFP
                     RQVAMYLARELTKASLNEIGDAFGGRDHGTVLHACKLVKKRIAEQDNIRQTISYIDSS
                     LQR"
     gene            1706..2803
                     /gene="dnaN"
                     /locus_tag="VIS53_07020"
     CDS             1706..2803
                     /gene="dnaN"
                     /locus_tag="VIS53_07020"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEY5767570.1"
                     /translation="MKFSVTKEKLLEALQQVQNVVSTRTTLPILSNVLLQADETELHL
                     TTTDLDVGVRGSCEAHVDKAGATTLPARRVFNIIRELPSSEIQIDVDGKNAASIRSGQ
                     SFFKILGLPEDEFPPLPKFEDAKVVTMRQKDLRDGLRKTSYAISTDETRYVLNGVLFS
                     FKDNKLTLVATDGRRLAMAEIELEFPRSHESDLIIPTKAVTELQRLLTDDGDVKVSMS
                     SGQIAFDLNKTLLVSKLIEGNYPNYRQVIPGEAKERVKLEREMFLNSLRRVSLLASDK
                     SHSVKLNFSKNNLDITANTPEVGEAKESLAVPYKGREFSIAFNPEFLMAPLRALTEDE
                     VFLDLIDEMSPGVLKIQTPFLYVIMPMRISS"
BASE COUNT          867 a          963 c          948 g          755 t
ORIGIN      
        1 aacaagacca aaagctccgc cccagaacga ttgagtgcgg atgcgcgaga gggtcgtagt
       61 aaacgtacgc tgcacaacaa cttgagccgt tttccctcgt atttacgtct ttttggcatt
      121 ttttttgaac tattgatctc cgaatcatac tcgggaacag ctcgattatt ggccaggtgc
      181 tgcgggcgat ttcccacgct acaggcccat gtggcgtttg tgtaacactg ttaacaactt
      241 ctcctatgga caagaaatgc gctcagctat ggcagcgatt gtcggccgct ctcaagccac
      301 agattagcgc ggatagtttt aaacgctggt tttctacagt cgagttagtg gaggcaaagg
      361 agaaatccat cacgcttact gttccaaaca acatttacca gctctggatc gaaagtaatt
      421 acatgccggc attgcaaaat gcgatcgttg tcgcgtttgg cggtccgcgt ttggtgaagt
      481 tttgcggccc gtcgacggct agcgcgcaac cgtctgcgga agatttggcc acggtgaaag
      541 aagcgttgcc cgcgcctcaa gtggatgcgc ggtcaggcgc gactgttccg ggactcaatc
      601 cgcgaaatac attcgaatcc ttcgtcgtcg gcccgaataa cgaaatcgcg cacgcagcca
      661 gcctcgctgt cgcgcaagcg ccggcgcgca cgtacaatcc tcttttcgtt tacggcggcg
      721 tcggtctggg caagacccat ctaatgcaag ccatcggcca gttcgtctgg gcgaaaagga
      781 aaaacatgaa ggtgatctac gtctcgagtg aactgttcat caacgagttc atcgatgcga
      841 tccagcacag taatctggtc aaattccgga agcgttatcg ccaggccgac cttctcttga
      901 ttgacgacat tcaatttctc ggtggtaaag agcggtcgca ggaggaattt ttccatacgt
      961 tcaacacgct ctttgacgga cataaacaga tcgtgctgtc cagtgaccgg cctgcttcag
     1021 aaatcgcgaa tctggagcac cgcctggtat cgcggtttga atgggggcta accgccgagc
     1081 ttcagccgcc cgacatcgaa acgcggctcg ccattctacg aaaaaaggcg aacgccatgc
     1141 agatcaaatt gcatgaggac gtttttcaat tcctcgccac ccgtatccgg acaaacgtac
     1201 gtcgtctgga gggcgccctc atgcgtgtcg cttcctttgc atcactcagt ggcagggaac
     1261 tgaccaacga aacggtggag catttgctaa aggacattct gcaggaagaa ggccggcaat
     1321 cgatcactat cgaacaaatt cagcggcgcg tagccgaaca ctttgacgtg cgtcttgccg
     1381 atatgacgag caagcggcgc ccggccagca tcgcttttcc acgacaggtc gctatgtatc
     1441 tggctcgcga actcacgaaa gcatccttga atgaaattgg cgacgcgttt ggcgggcgcg
     1501 accatggcac tgtgctgcac gcctgcaagc tggtgaagaa acgaatagcc gagcaagaca
     1561 acattcgcca gacgatctcg tacatcgaca gctccctcca gcggtagagc ccgcggcgcg
     1621 tgcaagccta caagggcaga gatgagagat tgcggttgcc gattaaaatc gaaggcttta
     1681 catcttaggc tgctttctgg tcaccatgaa atttagcgtt accaaagaaa aactgctcga
     1741 agccctgcaa caggtgcaaa acgtagtgag cactcgcacc accctgccca ttctttccaa
     1801 cgttttgctg caggctgacg agaccgaatt gcatctgaca accaccgacc tggacgttgg
     1861 cgtgcgcggc agttgcgaag cgcacgtgga caaagcagga gcgacgacac tccccgcgcg
     1921 gcgcgttttc aacatcatcc gcgaactgcc gtcgagcgag attcagatcg atgtcgatgg
     1981 aaaaaatgct gcgtcgatcc gtagcggcca aagcttcttt aagattctcg gtctgccaga
     2041 ggacgaattt ccgccgctcc ctaaattcga agacgcgaaa gtcgtcacga tgcggcagaa
     2101 agatttgcgc gacggtttgc gcaaaacttc ttacgcgatt tcgaccgatg aaacgcgtta
     2161 cgtgctcaac ggcgtcctgt tcagttttaa ggacaacaag ctaacgctgg tagcaaccga
     2221 tgggcggcgc ctcgctatgg cggaaattga actggaattc ccgcgaagcc acgaatcgga
     2281 cctgattatt ccgaccaaag cggtcacgga attgcagcgt ctgcttaccg atgatggcga
     2341 cgtgaaggtc agcatgagca gtgggcagat tgcattcgat ctcaacaaga cgctgctcgt
     2401 ctccaaattg atcgaaggca attatccgaa ctatcgccag gtcattccag gcgaggcgaa
     2461 agagcgcgtc aaactcgagc gcgaaatgtt tttaaattca ctccggcgcg tttcgcttct
     2521 ggccagtgac aagtcgcact cggtgaaact gaatttcagc aagaacaatc tcgatatcac
     2581 cgcgaacacg cccgaagtcg gtgaagcgaa agagtcactg gccgtgccct ataaggggcg
     2641 tgagttttct atcgcgttta atccggagtt tctcatggcg ccgctgcgcg cgctcacgga
     2701 ggacgaagtg tttctcgatc taatcgacga gatgagccct ggcgttctga aaattcaaac
     2761 gccattcctg tacgtgataa tgccgatgcg catcagctcg tgaagcagca atcgttcgag
     2821 gtgcgatagc caccggcctg tggccggtta gtaagaaacg ccttccgatc acagagaccc
     2881 cccccacagg gccgtggctg aacggatatg gtttcaaact gacccgctcc aaaatcgccg
     2941 ctttcaacgg agccatgttg catccgcgca gtgccaacaa ctgctccggc attaagaatt
     3001 actgagcagg ggttgttccg ccgcatcgag aagcgataaa caagttttgc aaagcaaaag
     3061 ccaatggaag ccgagtgctg ctagcacgac gggcatagct tgcagctaga aaagagcagc
     3121 gatgaaaaca attctcctgt tacacgacga agccaagcag ccgccgcagt tgttccgaaa
     3181 cgcgctacct gccaagctcc cagtccgcga gaccgaagct gtcgccggct gcaattgcga
     3241 tcgctggggc catccgtgtg cggggtgtct cgagcgcaac aaaccaaatg aaagccgacg
     3301 ctccggtttc atcaccagtc aaacagtgag ataacacagt ggaatacctg attgtattca
     3361 gcgttgccgc gatgatgata gcgtacttgt ggatcctcgg ccgctgcccg cggcacacgt
     3421 agccgccata atcgttgagt gccaataagg ctgcgacgat tctggttgag ttaatcggcg
     3481 gtgccacagt ttgcgtaggt agcaatcgca caggtcgtca gagactccgc cgt
//
LOCUS       DATDAJ010000282         3635 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1598993, whole genome shotgun sequence.
ACCESSION   DATDAJ010000282 DATDAJ010000000
VERSION     DATDAJ010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3635
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598993"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..2575)
                     /locus_tag="VIS53_07025"
     CDS             complement(47..2575)
                     /locus_tag="VIS53_07025"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5767571.1"
                     /translation="MKVPSLLAGKAERTRARSEQIASAKDRYYWWFDHPVEWERPARM
                     LYITGWCVNRCGKKIRSIRVRRGRQKFLGNYGIERKDVGAASERVGFAIAVPLPRGES
                     HVTIEVQESDDVWRAFSSRAVFGDPNGESVAPIDRKYFIPNPGANPRIEFWIDRPLVW
                     PKKARHLKVSGWCLAISGDEITEVRARVRNNIFPARFGKVRPDIGLRYDNRAGALRSG
                     FSLDATIPPGRSEFMMEARSGNGSWETFFIHPVRGAIFREPLDGDAETAGDYAQWIRC
                     YDQLQRDDLKRIREQIAQFHYSPLISILLPVYNSNLKWLRRAILSVQKQSYPHWELCV
                     VDDASTDRKLWPFLQRCARRDPRIKVIRRTENGHISAASNDALRLANGEFVALLDHDD
                     ELAPTALYFVAFALNKNRDLQLLYSDEDKLDEYNRRSEPYFKSDWNPELFLAQNFISH
                     LGVYRTDLIRRLGGFRVGFEGSQDYDLTLRCIEEIQPKQIEHLPWVLYHWRAGDQSTA
                     SNATAKPYAQEAARRAVQEHLERQKIAGTVVPSFDIYLQTKYVLPTEHPLVSIIIPTR
                     DQAPALKKCVHSIFEKTDYPTYELIVLDNESYDPEALEFLAELKKRDGVRVERIDGAF
                     NYSCLNNRGVELCRGTFVALLNNDVEVLHADWLTEMVSRAMQPKVVVVGARLWYPNGT
                     IQHGGVILGAGGIAGHAHAGLRRDDPGYFARAHLAQDVSAVTTACALVKREVYLQVGG
                     LDENLAVTFNDVDFCLRLREAGYRIVWTPYAELIHHESASRGFDNSAPKQVRFLAEVD
                     YMKSKWGDILQRDPFYNPNLSLDENLFTLAFPPRVTKPWQSVAG"
     gene            complement(2598..3275)
                     /locus_tag="VIS53_07030"
     CDS             complement(2598..3275)
                     /locus_tag="VIS53_07030"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014414.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767572.1"
                     /translation="MEPQPARSEYKKVWSALSTTEDQAKLHVIGVTEEAALQSTGEET
                     LRFLQDSVGIGKDDVVLEIGCGVGRVGKVVAPLCRKWIGCDVASNMLSLTAQRLKDLS
                     NVELVEISGYDLSGVADASVDVVYCTVVFMHLESWDRYNYISEAFRVLRPEGRIYVDN
                     INLCSDGGWKVFETHRAFSPTNRPPHMTQNSTPQEIETYLKRAGFDDVRIGTDDDWIR
                     AWGRKPI"
BASE COUNT          830 a         1022 c          929 g          854 t
ORIGIN      
        1 attgattccg tcataatcgg tgcagcagga cttcaatcag gcacagttaa cccgcaacac
       61 tctgccacgg cttggtcacc cgtggcggga aagccagagt gaagagattt tcgtcgagcg
      121 acaggttggg attgtaaaaa ggatcgcgct gcaatatgtc gccccacttt gatttcatgt
      181 aatcgacttc cgctagaaat cggacttgtt tcggcgcgct gttgtcgaaa ccgcgactag
      241 ccgactcgtg gtgaatcaat tctgcgtatg gtgtccagac aatgcggtaa cccgcttcac
      301 gcaatcgcag gcaaaaatcg acgtcattga aagtgactgc cagattttcg tctaaccctc
      361 cgacttgtag atacacttcc ctcttcacca gcgcacaagc agtggtcact gcggaaacat
      421 cttgcgcgag atgtgcccgg gcaaagtaac cgggatcgtc gcgccgaaga ccagcgtgcg
      481 cgtgaccagc aatgccacct gctccgagga tcactccgcc gtgctggatc gtcccgttgg
      541 gataccagag tcgtgcgcct accactacta cttttggttg catcgcacgg ctcaccattt
      601 cggtgagcca atccgcatgg agcacttcca cgtcattgtt gagcaacgct acgaaggtgc
      661 cccgacacaa ttcgacgcca cgattattca ggcagctgta attaaatgca ccgtcgatcc
      721 gctccacccg aacgccgtca cgttttttta gctcggccaa aaattccaag gcctcagggt
      781 cgtagctttc gttatcaagc acgattagct cgtatgtggg gtaatcggtt ttttcgaaga
      841 tgctatggac acacttcttc aaggctggag cttgatctcg cgttgggatg ataatggaaa
      901 caagcgggtg ttccgttgga agtacgtatt tggtctgtaa gtagatatcg aagctcggta
      961 ccacggtgcc cgcgattttc tggcgttcga gatgttcctg caccgcacgg cgagcggctt
     1021 cctgtgcata cggcttcgca gttgcgttcg atgccgtgct ttgatctcct gcgcgccagt
     1081 gataaagcac ccaaggcaaa tgctcgatct gtttcggttg tatctcttct atacaacgca
     1141 gcgtgagatc ataatcctgc gatccctcga acccaacgcg gaaaccaccc agccgtcgga
     1201 tcaaatcggt ccggtaaacg cccagatgcg aaatgaagtt ttgcgctaga aaaagctcgg
     1261 ggttccaatc cgatttaaag tacggctccg agcgtcgatt gtattcgtct agcttgtcct
     1321 cgtcgctata caggagctgc aaatcgcggt ttttgtttaa agcgaatgcc acgaaataca
     1381 gcgctgtggg cgccagttcg tcgtcgtgat cgagcagggc aacaaactcg ccgttcgcca
     1441 ggcgcagtgc atcgtttgac gctgctgaga tgtgtccgtt ctcggtgcgg cgtatcacct
     1501 ttattcgtgg gtcccgccga gcgcaccttt gcaagaacgg ccagagcttt cgatccgtcg
     1561 aggcatcgtc gactacacaa agctcccagt gtgggtatga ctgcttttgt accgacaaaa
     1621 tagcacgtcg gagccacttc aaattcgagt tataaaccgg cagcaaaatc gaaatcagcg
     1681 gggaataatg aaattgcgcg atttgctccc gaatgcgttt caagtcgtct cgttggagct
     1741 gatcgtagca tcgaatccac tgcgcataat caccggcggt ttctgcatcc ccatccagtg
     1801 gctctcggaa aatcgcgccg cgcacaggat gaatgaaaaa ggtctcccac gagccgttgc
     1861 cgctgcgggc ctccatcatg aattcactgc gcccgggagg aatggtggcg tcgagcgaaa
     1921 agccgcttcg caatgcgcct gcccggttgt cgtagcgaag accgatgtcc ggtcggacct
     1981 taccgaaacg cgcagggaaa atgttgttcc gcacgcgggc acgtacttca gtaatttcat
     2041 cgccagagat cgcgaggcac cagccggaga ctttgaggtg acgagctttt tttggccaaa
     2101 ccaacggacg atcaatccag aactcaatgc gcgggttggc gccgggattt ggaataaaat
     2161 atttgcgatc aataggagct actgattctc cattcggatc gccaaaaacc gcgcgactcg
     2221 aaaaggctcg ccacacgtca tccgactcct gcacttcaat tgttacatgc gattctcctc
     2281 tcggcagagg cacagcaatt gcaaacccga cgcgctcaga cgcggcgcct acgtccttgc
     2341 gttcaattcc gtagttaccc aaaaatttct gtcgcccgcg ccggacacgg attgaacgaa
     2401 ttttctttcc gcatcggttg acgcaccaac ccgtgatgta gagcattcgc gccggccgct
     2461 cccactcgac ggggtgatca aaccaccagt aatatcgatc ctttgcactc gcgatttgct
     2521 cactccgagc ccgtgtgcgc tcggctttgc cagccaacag agatggaacc ttcactgcgc
     2581 agtattacgg ggggagttta tattggcttt ctcccccaag ctcggatcca atcatcatcc
     2641 gtgccaatcc gcacgtcatc gaaaccggca cgtttcaggt aagtctcaat ctcttgcggc
     2701 gtggagttct gcgtcatatg cggcggacga tttgtgggcg agaacgcgcg gtgggtttcg
     2761 aacactttcc agccgccatc cgagcagaga ttgatgttgt ccacgtaaat tcgaccttct
     2821 ggtcgcaaca cgcgaaacgc ttctgaaatg tagttgtatc ggtcccagga ttcgaggtgc
     2881 atgaacacca ccgtgcaata aacaacgtcc accgaagcat ccgcaacgcc gctcaaatca
     2941 taaccggata tctccactag ctccacattc gacaaatcct ttaatcgttg tgcggtcagc
     3001 gagagcatgt tcgaagcgac gtcgcagccg atccattttc ggcagagcgg cgccactact
     3061 ttgcctacac gcccaacccc gcagcctatt tcaagaacaa catcatcctt tccaataccg
     3121 acgctgtcct gaagaaacct caaagtttcc tcgccggttg attggagcgc ggcttcttcc
     3181 gtcaccccga ttacatgcaa tttcgcctga tcttcggtgg ttgaaagggc agaccaaacc
     3241 ttcttgtatt cagagcgcgc cggctgaggc tccatcccgc gttaattagc ctgcgattgc
     3301 aacgcgtcaa tcgccttact tcattgtcag cgtctaatga gtaaaaggag gagcgacgtg
     3361 cggacgtcag cgggttcacc acgaacacaa cgtagatttt acgacatcca cagaatttta
     3421 ggcttgccaa acgaggctgt ttttgatcca ctgcgctaca tggacagggc tttgggcaga
     3481 acgcggatta atttttgctt agccttcgcg ttggctgttg ttgcagtggc cgagttacag
     3541 gcgcaacagt cgtcaactct cggaaacatt tccacgcgcg cctttgttca gacgggcgac
     3601 aacgtgatga ttggcggctt cattgttcaa ggcac
//
LOCUS       DATDAJ010000283        10490 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1611457, whole genome shotgun sequence.
ACCESSION   DATDAJ010000283 DATDAJ010000000
VERSION     DATDAJ010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10490)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10490)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10490
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1611457"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1119
                     /locus_tag="VIS53_07035"
     CDS             <1..1119
                     /locus_tag="VIS53_07035"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY5767573.1"
                     /translation="PTLPIVVMTAWATIELAVEAMKRGARDFVTKPWDNQRLLTIVRT
                     QIELAAALRRERKLEAENEMLRGTMPDLIAHSPTMRPVVDMISRVAPSDANVLITGEN
                     GTGKSLIAQAIHALSPRASRTMITVNMGGLSETLFESELFGHVKGAFTDAKTDRAGRF
                     ELADESTLFMDEIANIPVTQQAKLLRVIETGDFERVGSSKTLHANVRIISATNANLEN
                     EIAAGRFRQDLLFRLNTIELELPPLRDRREDIMPLANSFLRQHAERYRKQVGSFDESA
                     RERLLQHRFPGNIRELDHVVERAVLMTKDRQIRAADLGLTTSGSESRNVEEMSLEEVE
                     AFLIKKALARNDGNARKAAEALGLSRSAFYRRLQQYGL"
     gene            1265..2599
                     /locus_tag="VIS53_07040"
     CDS             1265..2599
                     /locus_tag="VIS53_07040"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5767574.1"
                     /translation="MNRSTKSRRRLSYEGKITWLTFVAVAPAVIIALALLWFGDHTPK
                     VQWTLTILIVGCLNAFIWSTREHVIRPLQTLSNLLAALREGDYSIRARGARDDSALGE
                     VLLEVNSLGETLRQQRLGAFEATALLRTIMSEIDVSIFTFDPERRLRLINRAGETLLG
                     RPMDKLLGKTAQELGLHACFDADDAEPLTLSFPGGSGRWGIRRSTFREQGLPHELLVL
                     TDLSRTLREEERRAWQRLVRVLGHEMNNSLAPIKSLAASLESLLRREPLPTDWKEDAR
                     SGLNSIASRADSLSRFLQAYTRLTKLPPPQKQDIDLAPLIQRVVDLEPRLEVQVRPGP
                     KATIRVDAAQIEQVLINLVHNAVDAALETHGNVTLGWRETGNCVEILVEDEGPGIMNP
                     ANLFVPFFTTKPDGSGIGLPLSRQIAEAHDGTLVLMNRNDRHGVQALLRLPK"
     gene            2878..3153
                     /locus_tag="VIS53_07045"
     CDS             2878..3153
                     /locus_tag="VIS53_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767575.1"
                     /translation="MKPLPNTQPNARKFPLVDYPYHASMLNGSSAPCLQTSKSLRDIT
                     RDYFDAEADREFISEAAVFTALIIMAIMPIVAGISAMLQLLSTLSLF"
     gene            3203..4492
                     /locus_tag="VIS53_07050"
     CDS             3203..4492
                     /locus_tag="VIS53_07050"
                     /inference="COORDINATES: protein motif:HMM:NF027890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEY5767576.1"
                     /translation="MRPAGFAPNLSSMDVPRTGVAAKKRKRRIMIIAASVLGLILATI
                     AISRLKPAVPSVDRSTVWVDTVKRGPMVRQVRGLGTLIPEDIRWIAANTEGRVEKINI
                     WPGTHVEPDSVILEMSSPELEQLAQDAESKASAAEADFTTSRATLQRELLDQEAITAK
                     AKSDYEQAKMERETNDQLSKNGLIAELQYKTSKIKEAELANRKEIEEKRLTFAHDSID
                     PQLASKQAVVDQAKQLAKLKADQVEALHVRAGMSGVLQQLPVQIGQRMKVGDNLARVA
                     DPTKLKAQVKIAETQAKDIQIGQKAVIDTRNGVANGHVTRVDPAVEQGTVNVEVAFDE
                     ALPKGARPDLSVDGTVELEHLDDVIYVGRPAFGQESNTVGMFKIVSGTSEAVRTPVKL
                     GKSSVNTIQIVDGLQPGDQVILSDTSAWDSHDRIRLN"
     gene            4547..5290
                     /locus_tag="VIS53_07055"
     CDS             4547..5290
                     /locus_tag="VIS53_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767577.1"
                     /translation="MKSTELTAEETTNEFDGNGFTPLIRLASVTKVFLTDEVETHALS
                     GIHLDIREGEYCSIAGPSGCGKTTLLSILGLLDTPSDGSYALKGHEVANLSFAERARV
                     RNREIGFIFQSFNLIGDLTVFENVELPLTYRGTSASDRKALVTESLERVGMAHRAKHL
                     PSQLSGGQQQRVAVARALAGRPAILLADEPTGNLDSHNGEAVMHLLRELHQGGATICM
                     VTHDERFAQHADRTVHLFDGRIVEDRMAA"
     gene            5319..7778
                     /locus_tag="VIS53_07060"
     CDS             5319..7778
                     /locus_tag="VIS53_07060"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5767578.1"
                     /translation="MLREIKVALRQLTKTPGFTIIAVITVALAIGATTAVLSLVNGLF
                     VRQLPYREPQQLILLLQHFKSQNLERIPVSPPEFKDYETRAHSFEKLGAFGYTNFNLA
                     GEDRPERIAGATVTAGVLPLLGVSPIKGRFFQPEECTLGRDDVVIISARLWQRRFNSD
                     PQIIGTKLLLNGKSFTVVGVMPPGFDFPLQLFNLGSGGQFGGRAEIWKPLAFTDDQMK
                     TRYSRGFWIIGRLAPGTSVAQAQAEIETINAQMRREHSDNYSQDNSFGGDVLSLQDLA
                     VAGMRPALLILLGAVFLVLLIACANLTTMLLARAAAREREIAIRVALGAGRMRLLKQV
                     FTESVLLSLIGGAAGVLLALWGVELLKTIGAQTVPRLHEVNVDLTVLGVTLAISVGTG
                     IIFGLAPALASARPELTEALKEGGRSSTVGTRRNRLRNGLVIAEVALALVLLSGAGLL
                     IKSFARLQNVNPGFNPRNALTFEISLPKVQYSEDASMVRFNKETQRRIAALPGVQAAG
                     FSTILPLAGTNSDSSFAIEGRPSDKNSPSPDEERREVSPDYFRALGTPLIRGRFFTDA
                     DNADAPLVIIVNQTFAKKFWPNEDALGKRIVMGGMSDDPKWITIVGIVGDMRHFGLDI
                     DAKPEMYVPFAQNAYFTTIYVVRSNQDPRVLLAAIRREIQAIDPAVPLANVRTFENVI
                     DDSVAPRRLSVVLLGVFAGVAVLLASVGIYGVMSFLVVQRTHEIGVRMALGAQRVDVL
                     KLVLVRSLKLISAGTIIGLIVALMSTHTLHALLYSVSAFDATTFAVVTIFLGAIALAA
                     SYLPAMRATRADPMVVLGHNT"
     gene            7785..8453
                     /locus_tag="VIS53_07065"
     CDS             7785..8453
                     /locus_tag="VIS53_07065"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767579.1"
                     /translation="MIKLRLLERRYPLGKEKFFYVLRDINLDIAEGEFVSIMGPSGAG
                     KSTLLHILGMHDHGWEGEYFLNENAVHHLKPKERATLRNEQIGFVFQQYHLLDDLTVY
                     ENLEIPLSYRRYSKSERAALVADTLDRFQIVGKKDLYPRQLSGGQQQLVGVARAIIAE
                     PKLLLADEPTGNLHSSQGEEIMELFRKLNDEGVTIVQVTHSDKNASYGKRVIQLRDGW
                     IVNK"
     gene            8470..>10490
                     /locus_tag="VIS53_07070"
     CDS             8470..>10490
                     /locus_tag="VIS53_07070"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5767580.1"
                     /translation="MSLDSFRQDVRVGLRVLRKDKTFFLLAVLVLGLGIGGATTQFTV
                     VNAVVLRGLSFPHPEQLVTIGLIDPKATDQNNNFGFGVIPTAQDYEDLKATQKSCSLM
                     AGYLSGSTINVTYKNNPQRYTGGYVTEDFFKITGVSPIIGRDFTGEDNKPGAERVIIL
                     GYEIWKRDFNGDPNVVGQNVRVNSKPATIIGVMPANFKFPNFEQLWTPLYNQFPPIPR
                     GQLVIGPNNAAPSVMGRLKPGVTLDQANAEFITVARQLAREYPKTNQNFTSATAKPLA
                     HSLIGLQFRQTVWAMLAAVILVLLIACVNVMNMQFGRVALRAKELAIRGALGATRWRL
                     VRQMLTESLVVAVFGAVAGVLLAYWSVDLLTRSMDALPAGFGLPYWVRFTIDARVLAF
                     TVGITLVATLASGLVPALISAHSNAAEMMKEGGRGNSSRLTNIITRLLVIGQIALTAA
                     LLIAATLEIRSIRNQLQLDYGYDENAVYSARMALMEGAYTEDGRRDFFKRAVRELRGN
                     PEFDSAALSDRFQMTFAGGGQYEVDGQNYLTDRDRPRGNFESVSDNYFSTLGLKILEG
                     RDFTIDDADTKQPVAIVNASFARKHWGNQSALGHQVRIFNPGEPAPWRTIVGVVPDTL
                     MQGPFDQQTDSAGFYMPLLGASPATQFCTIVVRPRAGQRAETLGPVLTKA"
BASE COUNT         2364 a         2850 c         3010 g         2266 t
ORIGIN      
        1 ccgacgctgc caatcgtggt gatgacggcc tgggcaacca ttgagctcgc cgtggaagcg
       61 atgaaacgcg gcgcgcgcga tttcgtgacc aagccctggg ataaccagcg attgctgaca
      121 atcgtcagga cgcaaatcga gctcgctgcc gcgctccgtc gggagcggaa acttgaagcg
      181 gaaaatgaaa tgctgcgcgg caccatgccg gatttgatcg cccattcccc cacaatgcgg
      241 cctgtcgttg acatgatttc acgcgtcgcg ccttcagatg ccaacgtgct gattactggc
      301 gaaaacggta cggggaaaag tttgattgcg caggcgattc acgctctgtc gccgcgcgcg
      361 agtcgaacga tgatcaccgt caacatgggc ggcctgtctg agacgctatt tgagagcgaa
      421 ctgttcggac acgtcaaagg cgcgtttact gacgcaaaaa cggatcgggc aggacgcttc
      481 gagctcgccg atgagagcac gctgttcatg gatgagatcg cgaatatccc ggttactcaa
      541 caggcaaaac tcttgcgggt catcgagacc ggcgatttcg agcgcgtcgg ttcatcaaaa
      601 acacttcacg ccaacgtgcg aatcatctcc gctacaaacg caaatctgga gaatgagatc
      661 gcagccggtc gttttcggca ggaccttctt tttcggctaa acacgattga gctcgaactg
      721 ccgccgttgc gcgatcgacg cgaggacatc atgccgctgg cgaacagctt tcttcgccaa
      781 cacgcagagc gttatcgcaa acaggttggc agtttcgatg aaagcgcgcg cgagcgtctg
      841 ctacagcatc ggtttcctgg aaatatccgg gaactcgacc acgtggtaga gcgggccgtg
      901 ctgatgacaa aggaccggca aattcgcgca gctgaccttg gcctaacgac tagcggctcc
      961 gaatcgcgga acgttgagga gatgagtctc gaagaggtcg aggcattcct gatcaaaaaa
     1021 gcgttggccc gcaatgacgg taacgcgcgc aaggctgcag aggcactcgg cttaagcaga
     1081 agcgcgttct accggcgcct gcaacaatat ggtttatgat cgactcgcgt acggctgcga
     1141 atcgaaaagc ggcggagcgc cgccgcactc caaaacgcaa gggagaaatt tgcggttgta
     1201 acggcggcca cgttttggag tgcggcagtg ctctgccgct ttcagctcgc cgcagcttca
     1261 ccggatgaat cggtcgacga aaagtcggcg ccggctttcc tacgaaggga agattacctg
     1321 gctcacgttt gtcgcggtcg cgccggcagt tatcattgcg ctggcgctcc tttggttcgg
     1381 cgatcacacg ccgaaagtgc agtggacact gacgattctg attgttggct gtttaaatgc
     1441 attcatttgg agcacgcgcg aacacgtcat tcgtccactg caaaccctgt cgaacctgct
     1501 ggctgcatta cgggagggcg actactccat ccgcgcgaga ggcgcccgcg acgatagcgc
     1561 attgggcgaa gtcctcctcg aagtgaattc gctcggcgaa accttgcgtc aacagcgtct
     1621 gggcgccttt gaagcgaccg cgctgctgcg cacgatcatg agcgaaatcg atgtgtcgat
     1681 ctttacgttc gatcccgaac ggcgtctccg cctcatcaat cgcgccggtg aaactttgct
     1741 gggacgaccg atggacaagt tgttaggcaa aaccgcgcag gaactcgggc ttcatgcttg
     1801 tttcgacgcg gacgacgctg aaccgcttac cttgagtttt ccgggaggtt ctggccgttg
     1861 gggcattcgc cgaagcacat ttcgcgaaca gggtttaccg cacgaattac tcgtgttaac
     1921 ggatctgagt cgcacgctgc gcgaagagga acgccgagcg tggcagcgac tcgtgcgagt
     1981 actcggccat gagatgaaca attcgttagc gccgattaaa tcgcttgctg ccagtttgga
     2041 atcgctgctg cggcgcgaac ctctgccaac ggactggaaa gaggatgcaa gatccgggtt
     2101 gaattccatc gcgtcgcgcg ccgattcgct aagccgtttc ctgcaagctt acactcggct
     2161 gacaaagctt ccgccgcctc aaaagcaaga catcgatctt gccccgctga tacagcgtgt
     2221 cgtggattta gaaccccggc tcgaggttca agtccggccg ggtccgaaag cgaccattcg
     2281 tgtagacgcg gcgcagattg aacaagtgct gatcaacctg gtgcacaacg ctgttgacgc
     2341 tgcgcttgaa acacatggaa acgtcacgct tggctggcgg gagacaggaa attgcgttga
     2401 gatccttgtt gaagacgaag gtcccggcat catgaaccca gccaatctct tcgttccgtt
     2461 ctttaccacg aagcccgacg gctcgggaat tggtctccca ttaagccgtc aaattgccga
     2521 agcccacgac ggcactttgg tgctcatgaa ccgaaacgat cgccacggcg tgcaagcttt
     2581 gctgcgtcta ccgaaataat tgagtagcgc atgcgtctcg cttgcgagct tgatgcgcgc
     2641 aagcccggag gctcacgcta catttgtccc gaagttggga cgatgcagtc ccagaagcgg
     2701 ataactcaaa agagcgcgct gagaagatcg acaaatttta actgctgagc atcagcagct
     2761 tacgactttg ttttgtggca tggcacggcc attgcaatag cccgaggaag atcagattaa
     2821 aaactttgaa tccaacgaat atgccaaaca cctctaactc ataggagctg aaagaaaatg
     2881 aaaccattgc ctaataccca accaaacgcg cgcaagtttc cgctcgtcga ttatccttat
     2941 cacgcctcga tgctcaacgg ttcgagcgcg ccgtgcctcc agacatcgaa atcattgcgc
     3001 gacatcaccc gcgattactt cgacgctgaa gcggatcgcg aattcatcag cgaagcggct
     3061 gtgttcactg cgctcattat catggcaatc atgcccattg tggccgggat atccgcgatg
     3121 ctccaactgc taagcactct ttccctgttc tgattcaaac gaaaccgtga ttccagaccg
     3181 aaaaccaaca gaccaaagaa ttgtgcgtcc ggccggtttt gcgccgaacc tttcctcaat
     3241 ggacgtgccg cgcacaggcg tcgctgctaa aaaacgcaag cgtcgcatca tgattatcgc
     3301 ggcgtccgtg ttgggcttga ttctggccac gattgcaatt tcgcgtttga aaccagccgt
     3361 gccgagtgtc gatcggtcga ccgtttgggt cgacaccgtt aaacgcggtc caatggtgcg
     3421 acaggtgcgc ggcctcggca cccttatacc ggaagacatt cgctggattg cggcaaacac
     3481 cgaaggccgg gtagagaaaa taaatatctg gccggggacg cacgtggaac ccgactcggt
     3541 gattttggaa atgagcagcc ctgagctgga acaattggct caagatgccg agtcgaaggc
     3601 cagtgccgct gaagccgact ttaccacgtc gcgcgcgacg ctgcagcgcg agttgttaga
     3661 tcaggaagca atcacagcca aggcgaaatc ggattacgag caggcgaaga tggaacgcga
     3721 aactaacgat cagctgtcca aaaacggttt gattgccgaa ctgcaataca agacttcaaa
     3781 aatcaaagag gccgaactgg cgaatcgcaa ggagatcgaa gaaaagcgtc tgacctttgc
     3841 gcacgattcc attgatccac agttagcgtc caaacaggcc gtggtcgatc aggccaaaca
     3901 actcgccaag ttgaaggccg accaggtgga agcgttacat gtgcgcgccg gcatgtcggg
     3961 cgtcctgcaa cagttgcctg tgcaaatcgg acagcgcatg aaggtcggcg ataatctcgc
     4021 gcgcgtggcg gacccgacga agctgaaagc gcaggtcaag attgctgaga cgcaggcaaa
     4081 ggacattcag attggtcaga aagccgtgat cgatactcgc aacggcgtcg cgaatggcca
     4141 tgtcacgcgc gtagatcctg cagtggagca ggggactgta aatgtcgaag ttgcctttga
     4201 tgaagcgttg cctaaaggcg cgcgacccga tctgagtgtt gatggaacag tcgagctcga
     4261 acacctcgat gacgttattt acgtggggcg tccggcgttc gggcaggaaa gcaacaccgt
     4321 cggaatgttc aaaatcgtca gcggcacttc ggaagctgtg cgtactccgg tgaagctggg
     4381 caaaagctca gtgaacacca ttcaaatcgt agatgggctc caaccggggg atcaggtcat
     4441 cctctctgac accagtgcgt gggactcaca cgacagaatt cgactgaact aagtgctgat
     4501 ttctgaatct gattttctga tttgaaacat caaagcaata aataacatga aatcgactga
     4561 actaactgca gaggaaacaa ccaacgagtt tgacggaaac ggcttcactc cgttgatccg
     4621 gctcgccagt gtaaccaaag tgtttctcac tgacgaagta gagacgcacg cgctttcggg
     4681 aattcaccta gacattcggg agggcgaata ttgttccatt gcgggaccat caggttgcgg
     4741 taagacgacg ctgctttcga ttctcggtct gctggatact ccttccgatg gcagctacgc
     4801 gctgaaaggt cacgaggttg cgaatctttc gttcgcggag cgcgcgcgcg ttcgtaatcg
     4861 cgaaatcggt ttcatcttcc agagtttcaa tttgatcggc gacctaactg tttttgagaa
     4921 cgtcgaatta ccgctcacat atcgcggcac gagtgccagc gaccgcaaag cactcgttac
     4981 cgaatccctc gagcgcgtgg gcatggcgca tcgggcaaaa cacctgccga gtcagctctc
     5041 cggcggtcag cagcagcgtg tcgcagtcgc tcgcgcgcta gccggcagac cggcgattct
     5101 gctggcggac gagccgaccg gcaacctcga ttcgcacaac ggcgaagctg tcatgcatct
     5161 gctccgcgaa ctgcatcagg gtggcgccac gatttgcatg gtcacgcacg acgagcgttt
     5221 cgcacaacac gcagatcgca ccgtgcactt gtttgatggc cgcatcgtcg aggaccgcat
     5281 ggctgcctga gggaatgtaa atacggggtt cagccgttat gctgcgtgaa atcaaagtgg
     5341 cgttgcgcca gctgacgaag actccgggtt tcaccataat agcggtcatc acagtggctc
     5401 tcgccattgg cgcgaccacg gctgtgctga gtctggtcaa tggtttgttc gttcggcagt
     5461 tgccatatcg agagccgcag cagctcatcc tgcttcttca gcatttcaaa tcgcaaaatc
     5521 tcgagcgaat tcccgtttcg ccgccggagt tcaaagatta cgaaacccgc gcgcacagtt
     5581 ttgaaaagct cggcgcgttc ggttacacga atttcaatct cgccggcgaa gaccgccccg
     5641 aacggattgc cggcgcgacc gtcacagcag gcgtattgcc gttgcttggc gtttcaccga
     5701 ttaaaggccg atttttccag cccgaagaat gcactctggg ccgcgacgat gttgtgatca
     5761 tcagcgcgcg actgtggcaa cggcgtttca atagcgatcc gcagatcatc gggacgaaac
     5821 ttcttctcaa cggcaaaagt ttcaccgttg tgggcgtgat gccgccaggt ttcgattttc
     5881 cccttcaact cttcaatctc ggcagtggag gccaatttgg cgggcgcgcc gaaatttgga
     5941 agccactcgc gttcaccgat gaccagatga agacgcgtta ctcccggggt ttctggatta
     6001 tcggacgcct cgcgccggga acctcagtcg cgcaagcgca agcggaaatc gaaacgatca
     6061 acgcgcagat gcgccgcgaa cattcggaca actacagtca ggacaacagt tttggcggcg
     6121 acgtattgtc gctgcaggat ttggccgttg ccggaatgcg tccggcgttg ctcatcctgc
     6181 ttggtgctgt ctttctcgtc ctgctgatcg cgtgcgcaaa tctcactacg atgttgctgg
     6241 cgcgcgcggc tgctcgcgaa cgcgagatag caattcgagt ggcgctcggc gccggtcgga
     6301 tgcggctgct gaaacaagta ttcactgaga gcgtgttact gtcgctgatc ggcggcgccg
     6361 caggcgttct tctggcgtta tggggcgttg agctattgaa aacgatcggt gcgcaaaccg
     6421 tgccgcggct gcacgaagtg aatgtcgatc tcacagtgtt gggcgtaacg ctggcaattt
     6481 ctgtcggcac gggaattatc ttcggtctcg ctcccgctct ggctagcgcg cggccggagc
     6541 tcactgaggc acttaaggaa ggtggccgaa gttcgaccgt gggcacgcgg cgcaatcgtt
     6601 tgcgcaacgg gctcgtaatc gctgaagtcg cgctggcgct ggtgctgctc agcggcgccg
     6661 gcctcctcat caaaagtttc gcgcgtctgc agaacgtgaa tccgggtttc aatccgcgca
     6721 acgcgctgac attcgagatt tcgctgccta aagtgcaata ttccgaggac gcgtcgatgg
     6781 tccgtttcaa caaggaaacg caacgccgaa tcgctgcgct gccgggagtg caggctgccg
     6841 ggttcagcac gatccttccg cttgccggga cgaacagcga ttcgtctttt gcgattgaag
     6901 ggcggccttc agacaaaaac agcccgagcc ctgatgaaga aaggcgcgag gtttctccag
     6961 attattttcg tgcgctcggg acaccgttga ttagagggcg gttttttacc gatgctgaca
     7021 acgcagatgc gccgctggtc attatcgtta atcagacgtt cgcgaaaaaa ttctggccta
     7081 acgaggatgc gctgggcaaa cgaatcgtga tgggtggaat gtctgacgat ccgaagtgga
     7141 tcaccatcgt cggaattgtc ggtgacatgc gccatttcgg attggatatc gacgccaagc
     7201 cggagatgta cgttcccttc gcccagaacg catattttac cacgatttac gtggtcagga
     7261 gtaaccagga cccgcgagtt ttgcttgcag cgatccggcg cgaaatccag gcaatcgatc
     7321 ccgcagtgcc tctggcgaat gtgcgcacat tcgagaatgt aattgacgat tcagtcgcgc
     7381 cgcgacggct ttcggtcgtt ttgcttggag tctttgcggg cgtcgctgta ctgctcgcaa
     7441 gcgtcggcat ttatggcgtg atgtcgtttc ttgtagtgca acgcacgcat gagatcggtg
     7501 tccgaatggc gctcggcgcg caacgcgttg atgtgctgaa actggttctc gttcgctcgc
     7561 tcaaactgat ctcagccgga acgatcatcg gcttgattgt cgccctaatg agtacccaca
     7621 cgttgcacgc attgctctat agtgtgagcg ctttcgacgc cacgacgttt gcggtggtca
     7681 cgattttcct tggcgctatc gcgctggcgg caagttatct gccggcaatg cgcgcgacca
     7741 gagcagaccc gatggtcgtg ctcggtcaca acacctgaca acctatgatc aagctccgcc
     7801 tcctcgaacg cagatatccg ttaggcaagg agaagttttt ctacgtcctg cgcgatatca
     7861 acctggatat cgccgaaggc gaatttgtgt cgatcatggg tccatctggc gctggtaaat
     7921 cgacgctgtt gcacattctt gggatgcacg atcacggctg ggagggcgaa tattttttga
     7981 acgaaaacgc cgtccatcat ctgaagccga aagagcgtgc gacactccgg aacgagcaga
     8041 tcggtttcgt gtttcaacag tatcatttgc tcgacgatct gacggtttac gaaaatctag
     8101 agatcccgct gtcgtatcgg cgttacagca aaagcgagcg cgccgccctc gtggcggaca
     8161 cgctcgaccg gttccagatc gttgggaaaa aggatttgta tccgcgtcag ctatccggcg
     8221 gacaacagca actcgtaggt gttgcccggg caatcattgc tgagccgaag cttctgctcg
     8281 ctgatgagcc tacgggaaac ctgcactcca gtcagggcga agaaatcatg gagctgtttc
     8341 gcaagctcaa tgacgaaggc gtgaccatcg tgcaggtcac acactcggac aaaaacgctt
     8401 cgtatgggaa acgcgtcatt caattgcgcg atgggtggat cgttaacaaa tagagagaga
     8461 aaatttgcca tgagtctgga ttcatttcgg caggatgttc gagtcggcct tcgcgttttg
     8521 cggaaggaca aaacgttttt tcttctggcg gtgctcgtgc tgggcctcgg catcggcggc
     8581 gctaccactc aattcacggt ggttaatgcg gtcgtactgc gcggcctttc ttttccgcat
     8641 ccggagcagt tggtgaccat tgggttgatt gatccgaagg cgacggatca aaataacaac
     8701 ttcgggttcg gcgtgatccc gacagcgcaa gattacgaag atttgaaagc gacccagaaa
     8761 tcctgctcct tgatggccgg ctatctcagc gggtcgacga taaacgttac ctacaagaac
     8821 aatccgcaac gttataccgg tggttacgtc accgaagatt ttttcaagat taccggtgta
     8881 tcgccgatta ttggacgcga cttcactggg gaggacaaca aaccgggtgc ggaaagggtc
     8941 atcattctcg gttacgaaat ttggaaacgg gatttcaacg gcgatcccaa cgtcgtcgga
     9001 caaaacgttc gagttaatag caaacccgca acgatcatcg gcgttatgcc ggcgaatttt
     9061 aagttcccaa atttcgagca actctggacg ccgctttaca atcaatttcc gccgataccg
     9121 cgcggccagc tcgtcatcgg cccaaacaac gccgcaccgt cggttatggg ccggctcaaa
     9181 ccgggggtga ctctcgatca ggcgaatgcg gaattcatca ctgttgcccg ccagctggcg
     9241 cgggaatatc caaaaacgaa tcaaaatttc acatcggcga cggcgaagcc gctcgcgcat
     9301 tcgctcatcg gtcttcagtt tcggcagacc gtctgggcga tgttggctgc agtcattctc
     9361 gttttactga tcgcatgcgt gaacgtcatg aacatgcagt ttggccgggt cgcattgcga
     9421 gcaaaagaac tggcgatccg gggcgcgctg ggagcgacac gttggcggct tgtcaggcag
     9481 atgttgaccg aaagtttggt ggtcgcggta ttcggagcgg tcgctggagt tcttctagcc
     9541 tattggagcg tcgacttgct gacccgctcc atggacgcgc tgccggccgg cttcggattg
     9601 ccgtactggg ttcgatttac aatcgacgcg cgggtactcg cgttcactgt cggcataaca
     9661 ctggtcgcga cgctcgcttc cgggctcgtc ccggcgctaa tcagtgctca cagcaatgca
     9721 gccgagatga tgaaggaagg cgggcgaggc aatagcagtc gattgaccaa catcatcacg
     9781 cggctgctgg tgatcggaca gatcgcactc accgctgcgc ttttgattgc ggcaacactt
     9841 gagatcaggt cgatcagaaa tcagcttcag ctcgactacg gctacgacga gaacgcggtt
     9901 tatagcgcgc ggatggcatt gatggaaggc gcgtataccg aagatggacg tcgcgacttt
     9961 ttcaagcgcg ccgttcggga attgcgcggc aacccggaat tcgattcggc agcgctaagt
    10021 gatcgctttc aaatgacgtt tgccggcggc ggtcagtacg aagttgacgg tcaaaattat
    10081 ctcaccgacc gcgatcggcc ccggggaaac tttgaatccg tgtcggataa ctatttttcg
    10141 acgctcgggc tgaaaatttt ggaagggcgc gatttcacaa ttgatgatgc cgatacaaag
    10201 caaccggtcg caatagtgaa cgccagtttt gcgcggaagc attggggaaa tcaaagcgcg
    10261 ctcggacatc aggtccgtat tttcaacccg ggtgagccgg caccctggcg aacaatcgtg
    10321 ggcgtcgttc ccgacacttt aatgcaggga ccgttcgatc agcagacgga ctctgccggc
    10381 ttttacatgc cgctgctggg cgcgtcgcct gcgactcaat tttgcacgat cgtggtccga
    10441 ccgcgtgcgg gccagcgtgc ggaaacgctc ggtcctgtgc tgaccaaagc
//
LOCUS       DATDAJ010000284         5466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1625731, whole genome shotgun sequence.
ACCESSION   DATDAJ010000284 DATDAJ010000000
VERSION     DATDAJ010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5466
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625731"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VIS53_07075"
     CDS             complement(<1..545)
                     /locus_tag="VIS53_07075"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5767581.1"
                     /translation="MEPWQLQPARDTGLTSAERFRSVRRESGLLESVAQQACFSVLRI
                     YFSIAHRLTISGREKLPAHGPFVLAANHCSHLDALVLGAALKPRHRERAFPIAAGDVF
                     FQTTAVSVFSAIMLNALPMWRKNCGPHALAELRRKLQEEKAIFIIFPEGGRTRTGSMM
                     PFKHGLGMLVAETNVPVVPCGL"
     gene            complement(551..1549)
                     /locus_tag="VIS53_07080"
     CDS             complement(551..1549)
                     /locus_tag="VIS53_07080"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEY5767582.1"
                     /translation="MNDATWQRLFGFRHAFDHSVTVVVVLSAVVLLLLAPLLIFITTQ
                     SAKSTAEKRKELWDRYRSWIWLVLCILIPILAGAFWTILAVATLSLLCYREYARITGL
                     FRERTISFIVVIGILLITFAELDNWYRLFVALFPLTVALIAIGGLIPDQPKGYIQRVG
                     LGVLGFALFGSALGNLGYMANDWNYRPILLLIIFAVELNDIFAYICGHLFGHRKFVPN
                     TSPNKTVGGALGAIILTTPLVAAIAHFIWTSTALDNPICLIGLGIIVSIVGQFGDLML
                     SAIKRDLGLKDTAKLIPGHGGLLDRFDSLILVAPAVFHYVGYFVGFGVGQPQRIFF"
     gene            complement(1546..2208)
                     /locus_tag="VIS53_07085"
     CDS             complement(1546..2208)
                     /locus_tag="VIS53_07085"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY5767583.1"
                     /translation="MNESAAKVVDRRPIATRNRKWAQSATAWLASQNVSPNAISIAGM
                     CACIAAGLALGLTSVGYSRILWLVAALAAQLRLTANMLDGMVALACGRASKVGELYNE
                     VPDRVSDAAMFIGAGYAWGGNVILGYIATILAIFTAYVRAAGKIAGSPNEFCGPMAKQ
                     HRMLVITVGCLYSVVVPRSWQIFHFDDFEIGVMALALSVIIAGCLVTVVRRLHRIARA
                     FR"
     gene            2341..3255
                     /locus_tag="VIS53_07090"
     CDS             2341..3255
                     /locus_tag="VIS53_07090"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-archaeol synthase"
                     /protein_id="HEY5767584.1"
                     /translation="MPATLEQTGPNVVTPRSTFILRFISTVALWSVALLIMFSGYEIL
                     FWLLISVCGMIGLWEFYRMLDHKGLPNFKITGMICGAVMLAGSFYYFSKIGPAGSYDF
                     EVAVLLFFLLTVFGRQMFARLRNDEPLQTMAYTLFGLLYVLWLYNFITKIVYLTPRSS
                     SGQLTGQFYVLYLIAVTKFSDMGAYLTGSAIGRHLMVPHISGKKTWEGFFGAIVLALL
                     CSLALYKLMPGHLSALNWTHATVLGLLLGVAAVLGDLAESIIKRSTDVKDSGNLLPGI
                     GGALDLLDSLLFTAPLLFFYMRLVIHVA"
     gene            3278..4516
                     /locus_tag="VIS53_07095"
     CDS             3278..4516
                     /locus_tag="VIS53_07095"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEY5767585.1"
                     /translation="MNRKRVVILGATGSIGESALKVARDIPERMEIVGLAAKSNAQKL
                     AAAANEVRPESICLVDETQIDVLRRALEYEPRILSGESGLLEIACLTNANVVLVAIVG
                     TGGLRPALAAIKAGKDLAVASKEILVMAGEIVMREARDRSVHVLPVDSEHNAIFQCLE
                     GKRSTLNAQRSTSNPETSTLGVGRWALDVSDVRRIILTASGGPFRETPRSDFDSITPE
                     QALKHPTWNMGPKITVDSATLFNKGLEMIEAHWLFGVEMKRVEVVVHPQSIVHSMVEF
                     TDGSTLAQLSYSNMCFPIQYAVTWPDRVPNSLPPLDFSKLSKLEFSTPRYDDFPALNL
                     ARRAGEIGGTLPAVMNAANEIAVAAFLDRKVRFPEIWGIVEQVMNRHTPVAHADLDAI
                     LGADQWARAQAQQRVESAKG"
     gene            4578..>5466
                     /gene="rseP"
                     /locus_tag="VIS53_07100"
     CDS             4578..>5466
                     /gene="rseP"
                     /locus_tag="VIS53_07100"
                     /inference="COORDINATES: protein motif:HMM:TIGR00054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEY5767586.1"
                     /translation="MILHIARVIFILLEVLILFNLLIVVHELGHFLAARWRGLYIEKF
                     GVWFGKPIWKKTINGVQYSLGSLPFGGFVALPQLAPMDIIEGKADLDRAKLPRISALD
                     KIIVAVAGPVFSLLLALFFAGVVWAVGHPVSEGDSTTVVGYVMSGSPAEKAGLQPGDK
                     ILSVDGKPVRRFMGMNDSISWDVVRSEGDKIAVKFQRDGKVQTVSVEPYKAETRGWRR
                     KSIRQLLIYPAETPIIEKVEPKSPAAAAGLRPGDIIRGFNQTPIYNPIALQEYISKHP
                     NEELVLHVERGGSKLDVPVK"
BASE COUNT         1272 a         1453 c         1549 g         1192 t
ORIGIN      
        1 agaccgcaag gcacgaccgg cacatttgtt tccgcgacca gcatcccgag tccgtgtttg
       61 aaaggcatca ttgaaccggt gcgcgtgcgt ccgccttccg ggaagatgat gaagatcgct
      121 ttttcttcct gcaatttgcg acgcaactct gcaagagcat gcggaccaca gttttttcgc
      181 cacattggca aagcgttgag catgattgca gagaacacac tgactgcagt ggtttgaaag
      241 aagacgtcgc ccgcggcgat cgggaaagcg cgttcgcgat gacgcggttt gagcgctgct
      301 cccagaacca gcgcgtcgag atgactgcaa tgatttgccg cgagcacgaa cggcccgtgt
      361 gccggcagtt tctcccggcc cgagattgtg agtcgatgag cgatcgaaaa gtaaattcgt
      421 aataccgaaa agcacgcctg ctgtgccacg ctttcgagca gaccgctctc gcgtcgtacg
      481 ctgcgaaacc gctcggccga agtgagccca gtgtcacgcg ctggttgcag ttgccacggt
      541 tccattagca ttaaaagaaa atgcgctgcg gctgcccgac gccgaagccg acgaaataac
      601 caacgtagtg aaacacagcc ggcgcgacca gaatcagact atcgaagcga tccaacaatc
      661 cgccgtgacc gggaatgagc ttcgctgtgt ccttgagacc cagatcacgt tttatcgcag
      721 aaagcattaa atctccgaac tggcctacta tgctgacgat aatcccaaga ccaattaagc
      781 agatcggatt atccaatgcg gtgctagtcc aaatgaaatg agcgatcgct gccactagtg
      841 gcgtggttaa aatgatcgcg ccgagggcgc cgccaaccgt tttgttagga cttgtgttcg
      901 gaacaaattt tcgatgacca aacaggtgac cgcagatgta ggcaaagatg tcattcagtt
      961 ccacggcaaa gatgatcagc aataggatcg gccggtaatt ccaatcattt gccatgtagc
     1021 caaggttacc gagcgcgctc ccgaaaagag cgaatccgag cacacccagg ccgacgcgtt
     1081 ggatatagcc tttcggttga tcaggaatta acccgccaat ggcaatcaac gcgacggtta
     1141 agggaaacaa cgcaacaaac agacgatacc agttgtctag ttcggcgaac gtgatcagga
     1201 gaatcccgat aacgacgatg aaactgatag tgcgttcgcg gaagaggccg gtgatgcgcg
     1261 catactcccg ataacaaagc aaactcagag tggccacagc gaggatcgtc caaaaagcgc
     1321 cggccagaat gggaatcaga atgcaaagca cgagccaaat ccaggagcga taacgatccc
     1381 agagttcctt tcgcttttcg gcagtgctct tcgcggattg cgttgtgatg aaaatcagga
     1441 gtggcgccag gagcagcaag acaacagcgc tcagcaccac gacaaccgtc acggaatgat
     1501 caaacgcgtg acggaatcca aatagccgct gccacgtcgc gtcgttcatc tgaaagctcg
     1561 cgcaattcga tgtagtcttc gaaccaccgt gaccaggcaa ccggcgatta tcacactaag
     1621 agcaagggcc atgacgccaa tctcgaaatc atcgaagtgg aagatctgcc atgatcgggg
     1681 aacgaccacg gaatacaggc agccaacggt aattaccagc atccggtgtt gtttggccat
     1741 tggcccgcaa aactcgttag gcgaaccggc gatttttcct gcggcgcgaa cgtaagcggt
     1801 aaagattgcc agaatcgttg cgatataacc aaggataacg tttccgcccc aggcgtaccc
     1861 tgcgccgata aacatcgccg catccgaaac gcgatcggga acctcgttgt aaagctcgcc
     1921 tacttttgaa gcacgaccgc acgcgagcgc gaccatcccg tccagcatgt ttgccgtcag
     1981 ccgtagttgc gcggcaagcg ctgcgacgag ccacaagatt cgactgtatc caacggaagt
     2041 caggccaagc gccaggcccg ccgcgataca cgcgcacatt ccggcgatcg aaatcgcatt
     2101 cggcgacaca ttttgtgaag ccagccacgc cgtcgcggat tgtgcccatt ttcgatttcg
     2161 ggtggcaatt ggccgacgat cgaccacttt cgccgctgat tcgttcatgg cgggcgcaat
     2221 ccatagcagg gtcgatgagc gatgaccaga tcacactcgg gagagcgtgg cgcatttcat
     2281 cgtgacatag atgcgctccc ttcttgcaca gtgcggcttc cttcgggatg atgcagagcc
     2341 atgcctgcga cgttggagca aaccgggccg aacgtagtta cgccgcgttc cacgttcatt
     2401 ttgcgattca tcagcaccgt cgccctatgg tcagtcgcct tgctgatcat gttctccggt
     2461 tacgagatcc tattctggct cttgatcagc gtgtgcggaa tgatcgggct ttgggagttt
     2521 taccggatgc tcgatcacaa gggcctgccg aatttcaaaa tcaccggaat gatttgtggg
     2581 gcggtgatgc ttgccgggag tttttattat ttctccaaaa ttggaccggc gggctcctac
     2641 gatttcgaag tcgcggtcct gctttttttt ctgctgacag tattcggacg gcaaatgttt
     2701 gcgcggcttc ggaatgacga gccgttgcag acgatggctt acacattgtt cggtctgctc
     2761 tacgtgcttt ggctttacaa tttcatcacc aaaattgtgt atctcactcc gcgttcgagt
     2821 agtggccagc tcaccgggca gttctacgtc ttgtatttga tcgcagtcac caaattctcg
     2881 gacatgggcg cttatctaac agggagcgcg atcgggcggc atttgatggt gccgcacatc
     2941 agcgggaaga aaacctggga aggttttttc ggcgccattg tcttggcgtt gctttgcagc
     3001 ctcgcgcttt acaaactgat gcccggtcat ttgtccgcgc tgaactggac gcatgcgaca
     3061 gtgctcggtt tgcttcttgg cgttgccgca gtgctcggcg acctggctga gtcgattatc
     3121 aagcgcagca cagacgtaaa ggactcgggc aatctgctcc cgggaattgg cggcgcactc
     3181 gatcttttgg atagtctgct cttcacggca ccgctcttgt ttttctacat gcgcctcgtg
     3241 attcacgtcg cataaacacg aggagtcatt taaccaaatg aatcgtaagc gtgtcgttat
     3301 tcttggcgcg actgggtcca tcggcgagag cgcgttgaag gtcgcgaggg atattccgga
     3361 gcggatggag atcgtcgggc tcgcggcgaa aagcaacgca caaaaactgg ccgccgctgc
     3421 gaatgaagtt cggccggagt cgatttgcct cgttgacgaa actcagattg atgtgcttcg
     3481 gagagcactc gagtatgagc cgcggatttt gtccggcgaa tcgggtttgc tcgagatcgc
     3541 ctgcctaaca aatgcgaacg tcgtgctcgt cgcaatcgtc ggcacgggcg gtttgcggcc
     3601 ggcgctggcg gcaattaaag cgggcaaaga tcttgccgtg gcgagcaagg aaatactggt
     3661 catggcgggt gagatcgtga tgcgcgaagc tcgcgacaga agcgtgcacg ttttgccggt
     3721 cgactctgag cacaacgcca tctttcagtg tttggaaggc aaacgctcaa cgctcaacgc
     3781 tcaacgctca acgtccaatc cagaaacttc gacgttgggc gttggacgtt gggcgttgga
     3841 cgtttctgat gtcagaagga tcatccttac cgcgtctggc ggcccgttcc gcgaaacacc
     3901 gcgatcagat ttcgattcga tcacgccaga gcaggcattg aaacatccga cctggaacat
     3961 gggaccgaag atcaccgtcg attctgcgac gttgttcaac aagggcttgg agatgatcga
     4021 ggcgcactgg ctttttggcg tagaaatgaa gcgtgtcgag gttgtcgttc atccgcaaag
     4081 catcgtgcat tcaatggtcg agttcacgga tggttccacg ctcgcgcaat taagttattc
     4141 gaacatgtgc ttcccgattc aatacgccgt gacctggccg gatcgagttc cgaactcgtt
     4201 gccacccctc gatttttcca agctgtcgaa gttggaattt tccactccgc gctatgacga
     4261 ttttccggca ttgaatctgg cgcgtcgcgc cggagagatc ggcggcacat tgccggcggt
     4321 gatgaatgcc gccaacgaaa tcgcggtcgc ggcattttta gatcgcaaag ttcggtttcc
     4381 ggaaatctgg gggatcgttg aacaagtgat gaaccggcat acgcccgttg cgcatgccga
     4441 tctcgatgca atattgggag ccgatcagtg ggcgcgagcg caagcgcagc aacgcgttga
     4501 atcggcaaaa ggttaaaaga tttacaacgg cagacagcat ggcgtgtcca acgattcact
     4561 gatcaccggc tgaccacatg attttgcata tcgctcgcgt catcttcatc ctgctcgagg
     4621 tcctgatcct gtttaatctg ctcatcgtgg tacatgagct cgggcacttt ctcgcggcgc
     4681 ggtggcgagg tctctacatc gagaaattcg gcgtctggtt tggtaaaccg atttggaaga
     4741 agacaatcaa cggcgtccaa tactcgctcg gatcactgcc attcggaggt tttgttgcgc
     4801 tgccgcaact tgcgccgatg gacatcatcg agggcaaagc cgacctggac cgggcgaagc
     4861 tgccgaggat ttccgcgctg gacaaaatca ttgtagcggt cgccggtccg gtgttcagct
     4921 tgctgcttgc cttgtttttt gccggagtgg tctgggctgt tggtcatcca gtaagcgaag
     4981 gcgattcaac aacggtagtt ggctacgtta tgtcgggttc gccagcggaa aaggccggcc
     5041 tgcaaccggg cgataaaatc ttgtccgtgg atggaaagcc ggtcaggcgt ttcatgggaa
     5101 tgaacgacag catcagctgg gacgtcgtgc ggagcgaggg cgacaagatt gcggtgaaat
     5161 tccagcgaga cggcaaggtg caaacggtat cggtggagcc ttacaaagcg gagacccgcg
     5221 gttggcggag gaaaagtata cggcagctgc tcatctatcc ggcagaaacg ccgatcatcg
     5281 agaaggtgga accaaaaagc cctgcagcgg cagccggact gcgtcccgga gacatcatcc
     5341 gtgggtttaa ccaaacaccc atctacaacc cgatcgcgtt gcaggaatac atcagcaaac
     5401 atccaaatga agagcttgtg ctgcacgtcg agcgcggcgg ttcgaagctc gatgttccag
     5461 taaaac
//
LOCUS       DATDAJ010000285         2395 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1643674, whole genome shotgun sequence.
ACCESSION   DATDAJ010000285 DATDAJ010000000
VERSION     DATDAJ010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2395
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643674"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            256..876
                     /locus_tag="VIS53_07105"
     CDS             256..876
                     /locus_tag="VIS53_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767587.1"
                     /translation="MKQPSLLATRRSLVERLADWGDQLRWQEFFDTYSKLIYSAARRS
                     GLTDAEAQEVVQETVITVAKNIDKLKYDPAIGSFKGWLLQITRWRIADQFRKREPGNA
                     KRPRLSDDRATVTIERVPDSRGIDLDAVWEIEWKENLFEAAIARVKKQIEPKQFQIFD
                     CYVRKEWPAQKVAARLGVNIGQVYLARHRVGALLKKEIKALEKRGG"
     gene            931..>2395
                     /locus_tag="VIS53_07110"
     CDS             931..>2395
                     /locus_tag="VIS53_07110"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5767588.1"
                     /translation="MARTPSPARKGARALRHCFASAACVKSPIPDQVTAQIPIIPDHE
                     LLRVIGRGAYGEIWLARTVTGAFRAVKVVYRSTFESERAFLREFEGMSAFEPISRGHA
                     GFINILHVGRTAEYLYYSMELADDHLDGRKVDIGSYEPRTLKTDLARHKRLSADESIR
                     LGLSLTEALEALHKRGLTHRDIKPSNIIFSESMPKLADIGLVAASGQRSFVGTEGYIP
                     PEGPGTPRADIYSLGKLLYETCTGKDRLDFPEVDSQLSTRPDRERLLQLNDVLVKACA
                     NDPNKRYDSAAEMNRDLAALERGERPRKSRAKILVATSLVVLLVTAAGFWLKPSQSSA
                     DLHLQTTIRTEPAGALVVLGDHAQKSPATFADLEPRKYNLRIMSPGYEPVETSVDFRR
                     KQLPDLPPFRLVRSKGALQIQSEPPGAEFSLRSEDGQVSREGVTPQTVADLPTGKYSI
                     VARHGDWEMRGDVDVQRGDTANKPFAFVRALTNISSEP"
BASE COUNT          555 a          651 c          711 g          478 t
ORIGIN      
        1 agatgtttcc aaaaatcagc tcagcgaatc cccgcagggc acgggcgatc cgcgaggtgg
       61 atttattcag gtttgagaaa agctggggtg tgttcatgag gggaatacgg gcgcctcgcc
      121 aaaatctttc agaaaaaagg tggaacgcgt tgtcctcaac gcgttgggat tcgattgggc
      181 ttcgcgattc ccgatcgtct tcggagaagc cgatccacct tgcccgtggt cggttcccgg
      241 agttagaaga tcggtgtgaa acagcccagc ttgctcgcga cgcggcgcag cttggtcgag
      301 cgtttggccg attggggcga tcaactgcgc tggcaggagt ttttcgacac gtactcgaag
      361 ctgatctact cagccgcgcg ccgatccggt ctcacggatg ctgaagcaca ggaagtggtg
      421 caggaaaccg tcatcacggt tgcgaagaac atcgacaaat tgaaatacga tccggcaatt
      481 ggttcgttca aaggctggct cttgcagatc actcgctggc gaattgccga tcagtttcgc
      541 aaacgcgaac ccggcaatgc aaaacgtcct cgtttgtccg acgaccgcgc aacggtaaca
      601 atcgagcgtg tccctgattc gcgcggcatt gatttggatg cagtctggga aatcgagtgg
      661 aaggagaatt tatttgaggc agcgatcgcg cgggtgaaaa agcaaatcga gccgaagcag
      721 tttcagattt ttgattgtta tgtgcgcaag gaatggccgg cacagaaagt tgccgcgcga
      781 ttgggagtca atattggcca ggtgtatctg gcgcgacatc gcgtcggtgc gctgttgaag
      841 aaggaaatta aagcgcttga aaagagaggt ggctgatcag ttctgcgtcg gggagcacgc
      901 gcctagcgtg gatgcttcga aaagttcgcg atggcgagga cgccatcgcc agcacgcaag
      961 ggcgcgcgcg cgctccggca ttgcttcgca tccgctgctt gtgtaaaatc gcccattccc
     1021 gatcaggtta cggctcagat accaatcatt cccgatcacg aactgctgcg tgtaatcggg
     1081 cgcggcgctt acggtgagat ttggttggcg cggactgtga ccggcgcatt tcgcgcggtg
     1141 aaagtcgtct accgcagcac gttcgaaagc gagcgcgcgt ttcttcggga attcgaaggg
     1201 atgtcagctt tcgagccgat ctctcgaggg cacgccggct ttatcaatat cctgcacgtc
     1261 ggacggaccg ccgagtatct ctactacagc atggaactgg cggacgatca tttggacgga
     1321 cgcaaggttg atattggcag ctacgaaccg cgcacattga aaaccgatct cgcgcggcac
     1381 aaacgcctct ccgccgacga atcgataagg ctcgggcttt cgttaacgga ggcgcttgaa
     1441 gcattgcaca aacgcgggct aacccatcgc gacatcaaac cgtcgaacat cattttcagc
     1501 gagagcatgc cgaagttggc cgacatcgga ttggtggcgg cgagcggaca gcgttcattc
     1561 gttggcacgg aaggttacat ccccccggaa gggccgggca cgccgcgcgc ggacatctac
     1621 agtctgggca aacttcttta cgaaacctgc accggaaaag accggctcga ttttccggag
     1681 gtcgattcgc aattgagcac gcgcccggat cgcgaacgtc tgctgcaact caatgacgtg
     1741 ctggtgaaag catgcgccaa cgatccgaac aaacgttacg actcggcggc cgaaatgaat
     1801 cgcgacctcg ccgcgctgga gcgcggtgaa cgcccacgaa agtcgcgcgc aaaaatttta
     1861 gtggcgacat cactcgtggt tcttctggtc accgcagccg gattttggct aaagccgtcg
     1921 caatcgagcg ctgatcttca cctgcaaacg acgatccgga ccgagccggc cggcgccctt
     1981 gtcgttttag gcgatcatgc gcaaaaaagc ccggcgacat tcgcagactt ggaaccccgc
     2041 aaatacaacc tgcgcatcat gagcccggga tacgaaccgg tggaaacgag cgttgacttc
     2101 agacgcaaac agttaccaga cctgccgccg tttcgacttg tgcgaagcaa aggggctctt
     2161 caaatccaat ccgagccgcc tggagcagaa ttttcattgc gcagcgagga cgggcaggtt
     2221 tcgcgcgaag gcgtaacacc gcaaaccgta gctgatcttc caaccggcaa atactcgatc
     2281 gtcgcgcgtc acggcgactg ggaaatgcgc ggcgacgttg acgtgcagcg cggcgacacg
     2341 gcaaataaac ccttcgcgtt tgttagggcg ctcacaaata ttagcagcga accca
//
LOCUS       DATDAJ010000286         4501 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1645345, whole genome shotgun sequence.
ACCESSION   DATDAJ010000286 DATDAJ010000000
VERSION     DATDAJ010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4501
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1645345"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VIS53_07115"
     CDS             complement(<1..407)
                     /locus_tag="VIS53_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="3D domain-containing protein"
                     /protein_id="HEY5767589.1"
                     /translation="MRTTAYTQYEGGSGAHNAVGTYLSGRHVLSAASDWSRYPLGTRF
                     RLADTSEEYVIDDYGNALVGTDTIDLYKGSRSEVRDWGVRYVDIDILQWGSEEESLKV
                     LAPRCKHRCVKKMVAALEKKKSKAVAQNTRQRTS"
     gene            complement(657..1121)
                     /gene="mscL"
                     /locus_tag="VIS53_07120"
     CDS             complement(657..1121)
                     /gene="mscL"
                     /locus_tag="VIS53_07120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEY5767590.1"
                     /translation="MSNMWKEFKEFAVKGNAIDLAVGVIIGAAFGSIVTSLVKDILMP
                     PIGLVTGGLDFSNKFLVLKAGADGMTNFATPADAVAHKAITWNYGNFLTFLINFVIVA
                     FCIFLVVKAVNNMKRPAPNAESKDCPACAMTIPIKATRCPHCTTELTQTAPR"
     gene            complement(1126..3678)
                     /gene="leuS"
                     /locus_tag="VIS53_07125"
     CDS             complement(1126..3678)
                     /gene="leuS"
                     /locus_tag="VIS53_07125"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEY5767591.1"
                     /translation="MNSDRRKPYPFDQIEPKWQAIWEERQLFHAPNPGEKGSDPAKPK
                     FYVLDMFPYPSGAGLHVGHPEGYTATDIVARYKRLRGFNVLHPMGWDAFGLPAEQYAI
                     KTGQHPAITTRENVAKFKSQLKRIGFSYDWQREINTTDPTYYKWTQWIFLQIYNSWFN
                     PETNRAEPISTYRGTDPDSVRLAYVADVAVNWCPELGTVLANEEVVDGKSEVGGFPVV
                     RRPMRQWMLRITAFAERLLEGLDELDWPEGIKLLQRNWIGRSQGAEIDFKIENTDQQI
                     RVFTTRPDTVYGGTFLVLAPEHSLVDLIVTEEQWPAVREYRERAARKSELERADLSKE
                     KTGVFTGAYAINPATNNKIPIWIADYVLLGYGTGAIGGVPAHDERDLEFAKKFDLPIV
                     VVVQPTGDEPALGFTGEGIAINSPVINGLTSAEAKKKITAWLEERGLGKRAINYKLRD
                     WLFSRQRYWGEPFPIVWENGKHRALQEKELPVVPPPLDDYKPTGTGEPPLAKAKEWIR
                     YSDKAMRETNTMPQWAGSCWYYLRFCDPHNDERFVGQEAEHYWMGGDKPGGVDLYVGG
                     TEHAVLHLLYARFWQKVLFDLGYLSKPEPFQRLVNQGIILGEDNQKMSKSRGNIVNPD
                     DVIDQHGADAFRCYEMFMGPLEQMKPWSTRGVEGVARFLARVWRLLRTENQAGEWELS
                     KKIKAIDATKPQQKLLHATIKKVTEDIESFSLNTAISQMMIFVNAFTNVETIPLSAMR
                     TFLILLNPFAPHISSELWERLSAEFGDARGDVSQHSWPAYDERLLIEDEVEIVIQING
                     KLRDRIKMPIAATEEELKTAALASPNIQPRVAGKTVRNVIVVPKRLVNVVVT"
     gene            3759..4367
                     /gene="rdgB"
                     /locus_tag="VIS53_07130"
     CDS             3759..4367
                     /gene="rdgB"
                     /locus_tag="VIS53_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEY5767592.1"
                     /translation="MVIELVVATRNRHKTREIQHILGPEFKVRDIGAHPDISKIHESG
                     TSFEENAKLKALVASRQLPALVIADDSGLEVDALGCAPGIYSARYAGANATERDKIDK
                     LLGELERVRATDDRRRARFRCVVALARNSDLLGTFEGTVEGRITDKARGDSGFGYDPI
                     FIPEGFEQTFGELPTEVKNTISHRAKAIRALADRLRRLEFGG"
BASE COUNT          980 a         1235 c         1198 g         1088 t
ORIGIN      
        1 gaagtgcgct ggcgagtatt ttgcgcgacg gctttgctct tcttcttttc gagagccgcg
       61 accatcttct tcacacaacg atgtttgcaa cgcggggcga ggactttcaa actttcttcc
      121 tccgaacccc attgtaaaat gtcgatgtcg acatagcgga caccccagtc tcttacctcc
      181 gaccggctgc ccttataaag atcgatggtg tcggtgccga ccaaagcgtt cccgtaatcg
      241 tctatcacgt actcttcgct agtgtcggcg aggcgaaagc gcgttccgag cgggtatcgg
      301 gaccaatctg aagcggcact taacacgtgc cggccggata gatacgtgcc gactgcgttg
      361 tgagcgccgc ttcctccttc gtactgcgtg tacgcggtgg tgcgcacctt tggaatgcgc
      421 tgtccgctgg taagagtcgg tttcgatgat tgcgtcgcgc agcctacgac aaagcaagct
      481 aaggctcccg cgagcgccag gttaaggcat ctaggcatcg gcgtttcggc ccttcaatag
      541 caggccggtt agccgggggc aagcgatttt tacggaaatt ccctaggtct aaacgactca
      601 ccagaataac cctgaccccg cgatcttccc gcccgcgtca gtgtcgattt agcagcctac
      661 ctcggggctg tttgcgtcaa ttcggtagtg caatgtgggc accgcgtcgc cttgatcggg
      721 atagtcatcg cgcatgccgg acaatctttt gactcagcgt tcggtgccgg acgcttcata
      781 ttgttaactg cttttacgac gaggaagatg cagaacgcga caatgacgaa gttaatcaaa
      841 aaagtgagaa aattaccgta attccaggtg atcgccttat gagcgactgc gtcagccgga
      901 gtcgcgaaat tagtcatgcc atctgcgccc gccttcaaaa caagaaactt gtttgaaaaa
      961 tcgagcccgc ctgtgaccaa acctatcgga ggcatcagga tgtccttcac gagcgacgtc
     1021 acgatacttc cgaaggccgc gcctatgatg acgccgacag cgagatcaat ggcgttacct
     1081 ttgaccgcga attctttaaa ttccttccac atgttgctca tcgaatcagg taacgacaac
     1141 gtttacaagc ctttttggaa caacaatcac gttgcgcacc gttttgcctg cgacgcgcgg
     1201 ttgaatgttc gggctcgcca gagcagccgt cttcagctcc tcctcggtcg ccgcgatcgg
     1261 catcttgatc cgatcacgaa gcttcccgtt tatttgaatg acgatttcaa cttcgtcttc
     1321 gattagcaaa cgctcgtcgt aagccggcca tgagtgttga gatacatctc cgcgcgcatc
     1381 gccaaattca gcgcttaatc tctcccacag ctcggacgaa atgtgcggcg cgaatggatt
     1441 aagcaggatc aggaacgtcc gcatcgcgga caatgggatc gtttcgacgt tcgtaaacgc
     1501 gttcacgaaa atcatcatct gcgaaatcgc cgtgttaagg gagaacgatt cgatatcctc
     1561 cgtcactttt ttgatagtgg catgcagcaa tttttgctgc ggcttggtgg catcgatggc
     1621 ttttatcttt tttgataatt cccactcgcc tgcctggttc tctgtcctga gcaggcgcca
     1681 gacgcgcgcg agaaagcgcg cgacgccttc tacgccgcgg gtactccacg gtttcatttg
     1741 ctcgagcggt cccataaaca tttcgtagca acggaatgcg tccgcgccgt gctgatcgat
     1801 cacgtcgtcg gggttaacga tgttcccgcg cgatttggac attttctggt tgtcctcgcc
     1861 gaggatgatt ccttggttca ccaagcgctg aaacggctcg ggcttcgaga ggtaccccag
     1921 atcgaataac actttttgcc agaatcgagc gtaaagcagg tgcaacaccg cgtgctcagt
     1981 tcctccgacg tacaaatcta cgccgccagg tttatcgccg cccatccagt aatgttccgc
     2041 ctcttggcca acgaatcgtt cgtcattgtg cggatcgcag aagcgcaggt aataccagca
     2101 tgagcccgcc cactggggca tggtattcgt ctcgcgcatc gccttgtcgg agtaacggat
     2161 ccactctttt gcctttgcga gaggcggttc tccggtgccg gtcggtttat aatcgtcgag
     2221 cggtggcgga acgactggca attctttttc ctgcaatgcg cgatgtttgc cgttttccca
     2281 aacgatcgga aatggctcgc cccaatatcg ttgacgcgag aataaccagt cgcgcagttt
     2341 gtaattgatt gcgcgtttgc cgaggccgcg ttcttcgagc caagcggtaa ttttcttttt
     2401 tgcctccgcg ctcgttaggc cgttgatgac cggcgagtta atcgcgatgc cttcgcccgt
     2461 gaatcccagt gctggctcat ctcctgttgg ctgaacaact acgacaatcg gcaaatcgaa
     2521 tttcttcgcg aattccagat cgcgttcatc gtgcgccgga acgccaccta tcgccccagt
     2581 tccgtagcca agcagcacgt aatcagcgat ccagattgga atcttgttgt tggtggccgg
     2641 attaatcgcg tatgcgccag tgaatacgcc ggttttttct ttcgatagat cggcacgctc
     2701 cagctcactt tttcgcgcgg cgcgctcgcg atattcgcgc actgccggcc actgctcctc
     2761 ggtaacgatt aaatcaacca aagaatgttc cggcgcgagc accaggaatg taccgccgta
     2821 aaccgtgtca ggtcgcgtag tgaaaacgcg aatttgctga tctgtattct caatcttaaa
     2881 atcgatctcc gcgccctggc ttcggccaat ccagttacgc tggagaagtt tgattccctc
     2941 gggccaatcc agttcgtcga gtccctcaag caatcgctcc gcaaaagctg tgatacgcaa
     3001 catccattgc cgcatcggtc ttcgtacaac cgggaagcca ccaacctcac tttttccatc
     3061 tacaacttct tcgttcgcca agactgtgcc aagttcggga caccagttga ctgcaacatc
     3121 agcgacgtaa gcgagacgaa cactgtccgg atcggttccg cgataggtgg aaatcggctc
     3181 ggcccgattt gtctccggat tgaaccagga gttgtagatc tgaaggaaaa tccattgtgt
     3241 ccatttataa taagtcgggt ctgtcgtgtt gatctcccgt tgccaatcgt aagagaaacc
     3301 gatccgcttt aattggctct tgaacttcgc tacgttttca cgggtggtga tcgccggatg
     3361 ctgcccggtt ttgatcgcgt attgctccgc gggtagaccg aaggcgtccc agcccattgg
     3421 gtgcaagacg ttgaagccgc gcaggcgttt atagcgcgca acgatgtcgg tggcggtgta
     3481 gccttccgga tgaccaacgt gcagcccagc cccgctcggg taaggaaaca tatcgagcac
     3541 gtagaatttt ggcttcgctg gatcggaacc cttctcgccg gggttgggcg cgtgaaaaag
     3601 ctggcgctct tcccagatgg cctgccattt cggctcgatt tggtcgaacg gatatggttt
     3661 acggcggtcg ctattcatta ctggtaaagc aggaaagcag aagccaggaa aagaaactag
     3721 aatttactct tgttttctgg tttccacatt tcaattgaat ggtgatcgag cttgtagtcg
     3781 caacgcgcaa caggcataag acgcgcgaga tccagcatat tctcggaccg gagtttaagg
     3841 tgcgcgatat cggagcgcat cccgacattt cgaagattca cgagagtgga acctcgttcg
     3901 aggaaaacgc gaaactcaaa gctctcgtcg cgtcaagaca attgccagct ctggtaattg
     3961 ctgacgattc gggactggag gttgacgctc tcggctgtgc accgggaatt tattcggcgc
     4021 gttatgctgg cgcgaacgcg acggagagag acaaaatcga taaattactc ggcgagcttg
     4081 agcgagttcg cgccactgat gatcggcgtc gcgctcgatt tcgctgcgtt gtggcgctag
     4141 cacgtaacag cgatcttctc ggaaccttcg aaggaacagt cgaaggaaga atcactgata
     4201 aagcacgagg cgactccgga ttcggctacg acccgatttt cattccggaa ggattcgagc
     4261 aaactttcgg tgaactgccc accgaagtga agaatacgat cagccatcgc gctaaagcga
     4321 ttcgcgcgct cgccgataga cttcgacggc tcgaattcgg cggctaaggc gagggaggtg
     4381 gaggagcagg aggaggagcc ggtcccgttt gggtgacgcc gcccgctgcc ctgatctgat
     4441 atcctacttt tgtgatgcca accgatcgaa ctttgtcgag gactccaatt acatcgccat
     4501 a
//
LOCUS       DATDAJ010000287         2598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1672500, whole genome shotgun sequence.
ACCESSION   DATDAJ010000287 DATDAJ010000000
VERSION     DATDAJ010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672500"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            476..1252
                     /locus_tag="VIS53_07135"
     CDS             476..1252
                     /locus_tag="VIS53_07135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767593.1"
                     /translation="MVSVTFSAGARAQGLVPSSLGGDSRSDEATNDVVQVITAKTAPA
                     ISKKTRKLLTESVRTSAEKPTRVAAQKPTQAVEKAPTRSTFTMEPVRPMNQPTVTQTV
                     QHGSRFSFRSPQGKKESVPVISDYYPNRIVYPLAKVDRRIDNRLVQAATLAQERAHAH
                     SRSRCWHYVKDALLASGAIDSRPKTELARDAASELVNNYGFKRLSITDPFSAPVGSVL
                     VYGTARSVGHVEIRTKDGFVSDFRSQIPSRRPLMGVYAKL"
     gene            complement(1314..>2598)
                     /locus_tag="VIS53_07140"
     CDS             complement(1314..>2598)
                     /locus_tag="VIS53_07140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767594.1"
                     /translation="VEQALIDALAKRYASPPQPEDRSGLDRAYADAMREMWKEYPKDP
                     DVGAFFAEAMMNLRPWDQWTSDGKPQPGTDEIIATLDAVLELNPNHPLANHLYIHAVE
                     ASPNPERAMAAADRLRNLQPGLAHNVHMPSHIDIRTGQWLKAVDTNAKAVEADQRHRK
                     IFGPHKGFLNVYVAHNRHMLAYAAMMTGQRDLAVKHIRAMVAEMPADFLSENAMQAEG
                     NVAMPLEVMVRFGLWDEILAEPEKYTDKMWFTRAFHHAARAIAYAAKADTINARKAQS
                     VFVERAKLVPKEDFVSNNSCEALLGVVAPMVEGEILIAERKIDSGIEQLRAAIQKEDA
                     LKYDEPPGWLIPVRHSLGAVLMKQQRFAEAEQVYRDDLARLPENGWSLLGLAESLRKQ
                     KKNADEVAQTQAKFKKVWAKADLTITTSCLCQPQA"
BASE COUNT          532 a          762 c          714 g          590 t
ORIGIN      
        1 ctgccgcaag ccggtccgct gctcaaagca aaaagaaatc tgttgcctcc gcagccaaac
       61 gcgctccctc cagccggagt tcaaccgaat attccgggcg aggccgcact cgttcggtgc
      121 gcagtcgcgt tacgggtatc acatccgatg ggcgattgat cctgcgtttg ccttcggggc
      181 gtactgccat cgtcgcaccg gacggcgaag aatcggtgcc ccgtcatcgg aaccgggcgt
      241 acatcgaccg tgaccagatg ttcggtcctc cgcccggatt tgagcccgat tacttcccgg
      301 gcgattgaaa cggggctgga gcgcgtcatt cccgtgcgca cggacacggc ggccccggta
      361 agccaccagc cgccaatggt ttttatcgaa aaaaaaagct tgccacgact tgtgatttcc
      421 ggcatacctc gcgctcgtgc ggagacaacc actcttccta gcactagcaa ctgcattggt
      481 ttcggtgacg ttcagcgcgg gcgcacgtgc ccagggcttg gtgccgtcca gcttgggtgg
      541 cgatagtcga agcgatgagg ccacgaacga tgtagttcag gtgatcacgg cgaagacagc
      601 gccggcgatc tctaaaaaaa cgcgaaaact cctcacggaa tcggtgcgca caagcgctga
      661 aaagccgacg cgggtcgctg cgcaaaagcc gacgcaagca gtcgagaagg cgcccacccg
      721 ctcaaccttc acgatggagc cggtgcgccc gatgaatcag ccgaccgtaa ctcaaacggt
      781 gcagcatggc agccgtttca gtttcagatc tccgcagggt aaaaaggaat ccgtacccgt
      841 gattagcgac tattatccga accgaatcgt ttacccgctt gccaaagtcg atcggcgaat
      901 cgacaacaga ttagtgcagg cagcaacgct cgctcaggag cgcgcccatg cgcattcgcg
      961 ctcgcgatgc tggcactacg tcaaagacgc gttgctcgct tcaggagcca tcgattcccg
     1021 cccgaagacc gagcttgcca gagacgctgc gtccgaactc gtcaacaatt acggattcaa
     1081 aagactgtcg ataacggatc cattctctgc gcccgttggt tcggtgctcg tgtatggtac
     1141 cgctcgaagc gttggtcacg ttgaaattcg caccaaggat ggtttcgtca gcgacttccg
     1201 ttcacagata ccatcgcgtc gcccgttgat gggcgtttac gcaaagctgt aggttttcgt
     1261 tcggtctgag aaaacgtcag ctcaactgat cctggtttct gtccggcagc tagttatgcc
     1321 tgcggctggc aaagacacga agtcgtaatg gtgagatcgg cttttgccca aactttttta
     1381 aacttcgcct gggtttgagc aacttcgtct gcgtttttct tttgcttccg caagctttct
     1441 gccaggccaa gtaacgacca gccgttttcg ggtaaacgcg cgagatcatc gcgatacacc
     1501 tgctctgctt cggcaaaacg ttgttgcttc atcaacactg ctccgagcga gtggcgcact
     1561 gggatcaacc atccgggtgg ctcatcatat ttgagggcgt cttccttttg gattgcggcg
     1621 cgcaattgct caatgccgct atcaatcttt cgttcggcga tcaggatttc tccctcgacc
     1681 atcggagcca cgacaccgag aagcgcttcg caactgttat tgctcacaaa atcttccttt
     1741 ggcacaagct tggcgcgttc tacgaaaaca ctttgggctt tgcgcgcgtt aatggtgtca
     1801 gctttcgcgg cgtacgcgat cgcgcgagcc gcatgatgaa atgcgcgggt gaaccacatc
     1861 ttgtcagtgt atttttccgg ctcggccagg atttcgtccc agaggccaaa gcgcaccatc
     1921 acttccagcg gcatcgcgac gtttccttcc gcttgcatcg cgttttcgct tagaaaatcg
     1981 gccggcatct ccgcgaccat ggcgcggatg tgtttcaccg ccaggtcgcg ctgacccgtc
     2041 atcatcgctg catacgccag catgtggcgg ttatgcgcga catacacgtt cagaaaacct
     2101 ttgtgcggtc cgaagatctt gcggtgccgc tgatccgctt caactgcctt cgcattagta
     2161 tctacggcct tcagccattg gccggtgcga atgtcgatgt gcgacggcat gtgcacattg
     2221 tgggcaagtc ccggctgtaa gttgcgaagc cggtccgcgg cagccatcgc gcgctccgga
     2281 ttcggcgatg cttccaccgc gtgaatgtaa agatgattcg ctaaaggatg gttaggattg
     2341 agttctaaca cggcgtcgag agtagcaatg atttcgtccg tgcccggctg cggtttgccg
     2401 tctgatgtcc attgatccca cggccgcaag ttcatcattg cttccgcgaa aaaagcgcca
     2461 acgtctggat cctttggata ttctttccac atttcgcgca tggcatcggc ataagcgcga
     2521 tccagtccgc tgcgatcttc cggctgcggc ggactagcgt agcgttttgc gagggcatcg
     2581 ataagcgcct gctcaacc
//
LOCUS       DATDAJ010000288        10538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1688263, whole genome shotgun sequence.
ACCESSION   DATDAJ010000288 DATDAJ010000000
VERSION     DATDAJ010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10538
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688263"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..377
                     /locus_tag="VIS53_07145"
     CDS             <1..377
                     /locus_tag="VIS53_07145"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF013030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEY5767595.1"
                     /translation="ADHHVVKTLHQIRNAGCRAGLTLNPDTPFQMIEPLLGKFDMLLV
                     MTVHPGFGGQPFRADQMEKVRRAAKWNQSREHQFDIEVDGGINPKTAQISVENGANVL
                     VAGTSIFRSNDYAKAIRELRGE"
     gene            complement(409..2157)
                     /locus_tag="VIS53_07150"
     CDS             complement(409..2157)
                     /locus_tag="VIS53_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEY5767596.1"
                     /translation="MNAAPSQSLINLLLESGVPSTEEAAELATNLNGGSWVSQVLDSG
                     KVDEQRFLAAIGNFFRVPIVSIDAKKIDRTTLSLLPSRFVFQHQILPIELKENSVVLA
                     TYDLFNSIGRQLAAQLLKKPPEWVLVPRAQLLRAMKTLYGVGAETFDEILKTRGSMDV
                     LEDTETAIELNADDPEASVVKFVNQIIREAIAERATDIHVEPLENDLRIRYRIDGILH
                     EVAVPPQLRVLQSAIISRLKVMSHMDIAERRLPQDGRMNLHASNVEIDVRVSTIPTVN
                     GESISLRLLSRGEQHFNFERLDLGDRQEEIIRNLLTQPNGIILLTGPTGCGKSTSLYC
                     FLSSINSVQRRIITIEEPVEYRIPGVSQIDVKPEIDLTFAKGLRHILRQDPNVVMVGE
                     IRDVETADISIRAAMTGHLVFSTLHTNDAVGGITRLLDMDVEPFLLASVVKSFIAQRL
                     VRTICPDCVEEVDYPRDYLAEISFPLKELGTRFRRGAGCDQCRQTGYQGRAAIYEVCV
                     ITEPLRKLIMRRRDGSELKQCAIAEGMETLRQDGWRRVAQGKTTIEEVVRVTQTDEVM
                     AETAAEAEPVVAAGAA"
     gene            complement(2168..2578)
                     /locus_tag="VIS53_07155"
     CDS             complement(2168..2578)
                     /locus_tag="VIS53_07155"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEY5767597.1"
                     /translation="MKRIALVLIVGLSATVAQGDEFDIVDYGIFRSLDPLAQRDEWGT
                     THQTPHVNATDFAPRYNWRWRYYFKSRQQLLLDPAYVGSLQTALRRLGYYCGPVDGVF
                     TPEVSYAIARLQKNYSMRVTGNLDTPVRRALHMP"
     gene            complement(2590..4947)
                     /locus_tag="VIS53_07160"
     CDS             complement(2590..4947)
                     /locus_tag="VIS53_07160"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretin N-terminal domain-containing protein"
                     /protein_id="HEY5767598.1"
                     /translation="MTVVLASATSVSAQRDSRPSLPAVKGVSPPAEEDAPAAPPNAPA
                     TVRLQFPNSDIVDVLHLYEQLTGKKLVMDNFVQGKVNIFIAKDVSREEAIKIIELSMA
                     LNGISLVPVGRDIVDVVGAGQNPRKAPVPIISDLADIPAGNPVISFLFRLQYADPQEL
                     QQVLMAYFQGSSGTINILALPKSSSLLVTQNADIIRQLAGVIEQVDVAPAEVVSEFIK
                     LERADASKVVDMLKEIFEKGTETPGQPGVRGVKVPGGVPQPMPVQVGDAGGGGILSEE
                     AVIVGKIKITPDVRTNRIHVVTRPINMPFIRQLIHEFDANVEFGKPVTRYLQYVSAGE
                     ILPVLVQALTEPGTEQGAGAGGAGGLPGVGPSPGQNQQQRGAGTSSLTNQYSGSQSGT
                     GSTLNISEELSTEPVDTVPKAVTIGNSKLIADQRANSIIILGNREVVMKVEKILDEMD
                     VKAPQVALSTVIGQLTLSNNEEFGVDWFAKYNRRFVGTSRNNSVFTTNDPNVPIPGSS
                     VAPGSSVAPVVPNILDPANLINFSQIIQNVGNGTNIYLAAGNAFAAIVHLLESTNRFR
                     VLSRPTVFTSNNKKAIIASGQEVPVPVNTLTNANAGIINQTAAVSASIEYKKVVLQLE
                     VVPLINSEKEVSLDILQKIDSIVPGGNVNISGNSVPTIDTRYIRTTVSAGNGSTIILG
                     GLIEDQKQKNYQGFPYLSRIPLLGAAFRSTASGKQRRELIILMCPEVTLTKLDLYRLR
                     QKWENKNTHFGPELDQAGCPDCPKVETGKQINLPQPDLPEGKDMH"
     gene            5143..5559
                     /locus_tag="VIS53_07165"
     CDS             5143..5559
                     /locus_tag="VIS53_07165"
                     /inference="COORDINATES: protein motif:HMM:NF022968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtzH-like domain-containing protein"
                     /protein_id="HEY5767599.1"
                     /translation="MAALVCAAPEQGSSPVAEIQSVLTAQQAAWNRGDIDAFMNGYGR
                     SAPTVFVSGDEVSRGWETVRDRYRMKYSDRTNMGTLNFSDIEVTILSSDAAVVLGRWR
                     LKRANDEPHGRFTLIFKRLPEGWRIVHDHTSAAPSQ"
     gene            complement(5623..7014)
                     /gene="mpl"
                     /locus_tag="VIS53_07170"
     CDS             complement(5623..7014)
                     /gene="mpl"
                     /locus_tag="VIS53_07170"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEY5767600.1"
                     /translation="MKEAPKSFHFLGICGTAMGAVAVALHERGFKVTGSDANVYPPMS
                     TFLENKGIALMEGYRAENIPADADVVVIGNAMTRGNPEVEAVLNRKLLYLSLPEVLRN
                     FFLRGRHNLVVTGTHGKTTTTALLTWIMEKAGRKPGYLIGGIPKNFGEGARLSDSKYF
                     VLEGDEYDTAFFDKRSKFVHYLPELVIVNNVEFDHADIFNNLDEIKLSFRRLLNIVPQ
                     NGMVVVNGDDPNSVEVAKDCLAQMVEVGFSENCAQRIRDVSYSAGVSRFKLGDDVFEI
                     PLIGEFNVHNAAMAATAARFYDVPTEEIASAFVSFVGIARRQELRGEAGGVKVIDDFG
                     HHPTAISQTLQALRHRFRGQRLWAVFEPRSNTTRRAVFQQQLPEALKMADGVFLSQVA
                     RIEQIPEDQRLKPERVVAAIAETGRPAFYEQNANAIVDRIIPMLRPKDVVVVFSNGGF
                     DNIHEKLLTRLRA"
     gene            complement(7146..9251)
                     /locus_tag="VIS53_07175"
     CDS             complement(7146..9251)
                     /locus_tag="VIS53_07175"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY5767601.1"
                     /translation="MNWLGRYRLLILASICVFWTGLIFLGHFFPMTPFLSAPWRGEQS
                     FEDLLRKEGRKTATRNDFVFLGLDQSTLQLPPLTPEEIANNRAFQVMTERPFPWSREV
                     WALLLDRLFSAGARLVMFDMMFDQQKEGDPAFHAALDRYRDKVVMAANFDMGNAAQAV
                     TPNDALIPPPQLQDDRVGFVNFWADPIDGKVRTVLYHVTNRQLAGLPPHPSEDTYESL
                     SARALTKIGHASDVPQDSDGHMIRFSAVDAYEPRALYEVFDPKFWHANYADGAFFKDK
                     IVMVGASAQILHDVVDTPMSPTTLGPGLHLQAMTAALGHEFLQPTPPKVGLLLVGAAG
                     LVAWSLVAFLRRPLLCVGALVALTATYLGTARLLYDNTGLLLLTVPVLSALVLTGSFS
                     LGFEYFLERLEKLRTRRTLERYVSKNLVAEILENPDSYYSSLRGMRVPVTILFSDLIG
                     FTTLAEKADPEALVAQLNEYLSRMTSEIFSNGGTLDKFIGDAIMAVWGNVRSLGTAQD
                     AKCCARAALGMRRQLSQLNQSWREQGRMGLGMGIGVNHGEVIVGNIGSQERMDPTVIG
                     DAVNLASRLEGLTRIYGVDMLVGASVAELVRDEVYLRSVARVQVKGKTKPVDVFTFVA
                     ARGEETDPEFLKWLETYEEALDKFRTRDFTDAKILFSRFLEFYPDDLLAKMYLQRALE
                     YEQAPPDEAWEAIEVFKKK"
     gene            9560..10399
                     /locus_tag="VIS53_07180"
     CDS             9560..10399
                     /locus_tag="VIS53_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767602.1"
                     /translation="MLGRQAYPGPSATPSVETEGYPVTSPNDKDIGEQQILKRVEEYK
                     PFTISIYSPFYWTSNAALVSRGEQDDVLVAPGVTLMYEPRITNTLYAQVGVVQQFFFY
                     DQLTELNFASLDAIAGLHYYLPQFHNLSLRGYYDYNRLTDTDNFDEIFVDHSIILNAE
                     LPFRIARAQKLLAGVALNLSFEGNPESLRRNNYSLYGNYEVALSRFFFLDAGFQFVVR
                     DYYSGDRTDVNEILSVSANYRVRDWLTLSALSSFAWNQSNHSVFDYSVANIGGGVALT
                     LKF"
BASE COUNT         2378 a         2981 c         2761 g         2418 t
ORIGIN      
        1 aagccgacca ccacgtcgtg aaaacgttgc accagattcg aaacgctggt tgccgtgccg
       61 gcctcacgct aaatccggac actccatttc aaatgatcga accgttgctc gggaagttcg
      121 atatgctgct cgtcatgact gttcatccgg gttttggcgg acaaccgttc cgcgctgatc
      181 agatggaaaa ggtaaggcga gcggcgaaat ggaaccaatc gcgcgagcac cagttcgaca
      241 tcgaggttga tggaggcatt aatccaaaga ccgcccaaat ctcagtcgaa aacggcgcga
      301 acgtccttgt cgccggcacg tcgatttttc gttccaacga ttacgccaaa gcaattcgtg
      361 aattgcgcgg cgaatgagag gacgaagaat ctcccgcgct tagagcattt aggccgctcc
      421 ggcggccacg accggctccg cttctgcagc ggtttcagcc atcacttcgt cagtctgcgt
      481 gacgcgaaca acttcttcga tagttgtttt gccctgggct acgcgtcgcc agccatcctg
      541 ccgcaaagtc tccatgcctt cggcaatagc acattgcttc aactcgctgc cgtcacgcct
      601 ccgcatgatc agctttcgca gcggctccgt gatgacacag acttcataaa tcgctgcgcg
      661 accttggtaa ccggtttggc gacattgatc acaaccggcc ccgcgccgga aacgagtacc
      721 gagttccttc aaagggaaac tgatctcagc gaggtaatcg cggggataat cgacttcttc
      781 gacgcaatcc gggcaaatcg tgcgcacgag ccgttgggcg ataaacgact tcaccacaga
      841 ggcgagcaga aacggttcca cgtccatgtc gagcaaacgc gtaatgcccc ctacggcgtc
      901 atttgtgtgc agcgtgctga aaacaaggtg acccgtcatc gcggcgcgaa tcgaaatgtc
      961 cgcagtctcg acgtctcgaa tttcgccgac catgaccaca ttcgggtctt gtcgcaaaat
     1021 gtgtcgcagg cctttggcga aagtcagatc aatctctggt ttcacgtcga tttgcgagac
     1081 accagggatt cgatattcca ccggttcttc aatcgtaatg atgcggcgct gcacggaatt
     1141 gatgctgctg agaaaacaat acagcgaggt tgatttccca cagccggtag gacccgtcag
     1201 caggataatt ccgttcggtt gggtgaggag gttccgaatg atctcttcct gcctatcgcc
     1261 taaatcgagt cgctcgaaat tgaagtgctg ttcgccccgg cttagcaaac gcagactgat
     1321 tgactcgccg ttgacagttg gaatggtcga gacgcgcacg tctatctcca cattgctcgc
     1381 gtgcaaattc atccgcccgt cctgtggaag tcgtcgctcg gcaatgtcca tatgtgacat
     1441 caccttcaaa cgcgagatga tcgcggactg caagacgcgc aattgcggtg gcacggcgac
     1501 ttcgtgcaaa atgccgtcga tccgatatcg aatgcgcaga tcgttttcca gcggttcaac
     1561 gtgaatatca gtcgcgcgct ctgcaatagc ttcgcgaatg atctggttaa caaatttgac
     1621 cactgacgct tcgggatcgt cggcattcaa ctcaatcgcc gtctcggtgt cctccagcac
     1681 gtccatggaa ccgcgggtct tcaggatctc gtcgaacgtc tccgcgccaa cgccataaag
     1741 agttttcatg gcgcgcagaa gctgggcgcg cggcacgagc acccattcgg ggggtttttt
     1801 caacagctgc gccgcaagct ggcgcccgat cgaattgaaa agatcgtaag tcgccagcac
     1861 caccgaattt tccttcaact cgatcggcag aatctgatgt tgaaaaacga aacggctcgg
     1921 cagaagcgac aaagtggtgc gatcgatttt ctttgcgtcg attgagacga tcggcacccg
     1981 gaaaaaattc ccgattgcgg cgaggaaacg ttgttcgtcc accttgcccg aatcgagcac
     2041 ctgacttacc cacgaacctc cgttgagatt agtggccaac tcggccgcct cttcggtcga
     2101 cggcaccccg ctttcgagca gcaaattgat cagggactga cttggagctg cgttcatcca
     2161 gcaagactca cggcatgtgt agcgcccgcc gcacgggggt atcaaggttg ccggtcacac
     2221 gcatcgaata attcttctgc aggcgtgcaa tggcgtagct cacttctggg gtgaataccc
     2281 cgtccaccgg tccgcaatag tagccgagac gacgcaacgc cgtttgcagc gacccaacgt
     2341 aagccggatc caagaggagt tgttgacgcg acttaaaata gtaccgccac cgccagttat
     2401 atctcggcgc aaaatcggta gcattcacgt gaggcgtctg atgagtggtt ccccactcgt
     2461 ccctttgagc cagaggatcg agggatcgaa agataccata atcgacaatg tcaaattcgt
     2521 cgccctgcgc gaccgttgcg ctcaacccga caatcaaaac gagtgctatt cgtttcataa
     2581 ttacgagcgt taatgcatgt ctttgccttc gggaagatcc ggctgcggta agtttatttg
     2641 tttacccgtc tcgactttag ggcagtccgg acacccagcc tgatccagct ccggaccaaa
     2701 atgtgtgttt ttgttctccc atttttgccg cagtcgataa agatccagtt tcgtcaaggt
     2761 aacctctgga cacatgagaa tgatcagttc gcgacgctgc ttgccactcg ctgtggaacg
     2821 gaacgccgcg ccaaggaggg gaatgcgcga gagataagga aacccttgat agttcttctg
     2881 cttttggtcc tcaattagtc caccgaggat gatcgtcgat ccattccccg cggaaacggt
     2941 cgtgcgtata taacgcgtat cgattgtcgg gaccgagttg ccgctgatgt ttacgttgcc
     3001 tccgggaaca atactgtcga tcttctgcag aatatcgagt gacacctcct tctcagaatt
     3061 aatgagcggg acgacctcaa gctgcaacac caccttcttg tactcgatgc tcgccgaaac
     3121 agcagctgtc tgatttataa tcccagcgtt cgcatttgta agggtattta ccgggacggg
     3181 aacctcctgc cccgaagcga tgatggcttt tttgttgttg ctggtgaaaa cggttggccg
     3241 ggaaagaact ctgaatcgat tcgtggattc cagcagatgc acaatggctg cgaacgcatt
     3301 gccggctgcc aggtaaatat tagttccgtt gcctacgttt tggatgattt ggctgaagtt
     3361 gatcagattg gctggatcga gaatattggg gacaaccggt gccacgctgc tgccgggggc
     3421 tacggaggaa ccggggatgg gaacgttcgg gtcattggtc gtaaacacac tattattccg
     3481 cgaggtgccc acgaaccttc tgttgtactt tgcgaaccaa tcgacaccga attcctcgtt
     3541 attgctaagc gtcaattgcc caatcactgt gctcaacgcc acttgcggcg ctttgacgtc
     3601 catttcgtcc aggatctttt ccaccttcat caccacttcg cgattgccaa ggataatgat
     3661 tgaattggcg cgttgatccg cgatcagctt cgaattacca atggtgactg cctttggcac
     3721 ggtgtccacg ggctcagtgg aaagttcctc ggaaatatta agcgtgctgc ccgtgccgct
     3781 ctgactgccg ctgtattggt tcgtcagtga cgaagtaccc gctccccgtt gttgttgatt
     3841 ttgcccaggc gacgggccaa cgcccggaag tccccccgct cctccagcgc cggcgccttg
     3901 ttctgttccc ggttcggtca atgcctggac aagaacgggc aaaatttcgc cggcagaaac
     3961 gtactgcaaa tagcgagtga ccggctttcc aaactcgaca ttggcatcga attcatggat
     4021 caattgccgg ataaacggca tgttgatcgg ccgtgtcacg acgtggatgc ggttcgtgcg
     4081 gacatcggga gtgatcttaa ttttcccgac gatgactgct tcttcggaaa gaataccgcc
     4141 gccgcctgcg tcccccacct gcaccggcat tggctgtggc acacctccgg ggacctttac
     4201 gccccgaaca cccggctggc ccggtgtctc agtgcccttc tcgaaaatct ccttgagcat
     4261 gtcgacgact ttgctggcat ccgcgcgttc caacttgatg aactcactca ccacttccgc
     4321 cggcgcgaca tccacctgct caatcactcc ggcaagttgc cgaataatat cggcgttctg
     4381 tgtcacgagc aggctggagg attttggcag cgccaaaata ttaatcgtgc ccgagctccc
     4441 ctgaaaatat gccatcaaaa cttgctgaag ctcctgggga tcggcgtact gcagccggaa
     4501 caaaaagctg attacaggat ttcccgccgg gatgtcggcc aagtccgaga tgatcggaac
     4561 cggtgctttg cgcggattct gaccggcgcc cacgacatca acaatgtcgc ggcccaccgg
     4621 aacgagtgaa atcccgttga gtgccatgct cagctcaatg atcttgattg cctcttcgcg
     4681 ggacacgtct ttggcgatga aaatgttgac cttgccctgc acgaaattat ccatcaccaa
     4741 cttcttgccg gtgagctgct catagagatg caacacgtcg actatgtcac tgttaggaaa
     4801 ttgcagtcgc acggtagccg gtgcgtttgg gggagcggca ggcgcatcct cttctgccgg
     4861 cggactgact cccttaaccg ctggcagaga gggacgcgag tctctctgag cggaaacgct
     4921 ggtcgcgctg gcaagcacga ctgtcacgat gcagaaaagc cgatgcacag tccttttttg
     4981 ctggatggcg gaccgtagta gatttatgag acccgtcaac gtatttccct ctgtggagcg
     5041 gtgcttcaat ggtagtcctg gacgcggcag ggagtgctag cttataggag atcggtgtta
     5101 ttgcaaacca gactcaggct tcccgtcatg tgctacatcc tgatggcggc ccttgtttgt
     5161 gctgcgcccg aacagggttc gagtccagtc gctgaaattc agtccgtcct caccgcgcag
     5221 caggctgcgt ggaaccgtgg cgacatcgac gcgttcatga atggctatgg gcggtcggca
     5281 ccgacggtat ttgtctcagg ggacgaagtc agccgcggtt gggaaacagt ccgcgaccgg
     5341 tatcggatga aatattccga tcgaacgaat atgggaacgc tcaatttttc cgacattgaa
     5401 gtcacgatcc tttcatcgga tgcggcggtc gtactcggtc gctggcggct aaagcgcgca
     5461 aacgacgagc cgcacggtcg gttcacactc attttcaaac gcctgccgga aggctggcgc
     5521 attgttcacg atcatacgtc cgctgctccg tcacagtaac tcaggcatcc tgcctgactg
     5581 gtcgcgccga aatccttgtc cgcagcaggc aggatgcctg agttacgcgc gcaatcgggt
     5641 gagaagcttc tcatggatat tgtcgaagcc gccgttgctg aaaaccacga ccacgtcctt
     5701 tggccggagc atcggaatga ttcggtccac aattgcgttc gcattttgct cgtagaacgc
     5761 aggccggccg gtttcagcga tcgccgcaac gacccgctcc ggttttaagc gctgatcttc
     5821 ggggatttgt tcgatccggg cgacctgcga gagaaataca ccatcggcca ttttgagcgc
     5881 ttcagggagt tgctgctgaa acaccgcgcg ccgagtcgta ttcgagcggg gctcgaatac
     5941 tgcccacagt cgctgtccac gaaagcgatg acggagcgcc tgcaatgttt gagagatcgc
     6001 agtggggtga tgcccgaaat cgtcgattac tttaacgccg ccagcttcgc cgcgaagctc
     6061 ctgccggcgc gcaatgccca cgaaactgac gaatgcgctg gcgatttctt ccgtcggcac
     6121 atcataaaag cgcgcggcgg tagccgccat cgcggcgtta tggacattga attcgccaat
     6181 aagcggaatt tcgaaaacgt cgtcgccgag tttgaatcga gagacaccgg ccgagtaaga
     6241 aacgtctcga attcgttgcg cgcagttttc cgagaaaccc acctcgacca tctgcgcaag
     6301 gcaatctttg gcgacctcga cggaattcgg atcgtcgccg ttcacgacga ccataccgtt
     6361 ttgaggaacg atattcagca agcgccgaaa gctgagcttg atctcatcga gattgttgaa
     6421 gatatccgcg tgatcgaact cgacgttgtt cacgatcacg agttccggca gataatgaac
     6481 gaactttgac cgcttgtcga aaaatgcggt gtcgtactcg tcaccctcga gcacaaaata
     6541 ttttgaatcg ctgagccgcg cgccttcgcc aaaattcttc ggaatgccgc cgattagata
     6601 acccggtttg cgtccagctt tttccattat ccaggtaagc aaggccgtgg tcgttgtttt
     6661 accgtgcgtt ccggtgacca cgagattatg gcggccgcgc aggaagaaat tcctgagcac
     6721 ctctggcaac gacaaataaa gtagttttcg gtttagcacc gcctccactt cggggttgcc
     6781 acgcgtcatc gcgttgccaa tcaccaccac gtcggcatcc gccgggatat tctccgcgcg
     6841 ataaccttcc atgagcgcga ttcccttgtt ctcaaggaaa gtggacatcg gtgggtaaac
     6901 atttgcgtcc gacccagtga ccttaaagcc gcgctcatgc aacgcgacgg caactgcgcc
     6961 catcgctgtc ccgcaaattc cgaggaagtg aaaactcttg ggcgcttctt tcacgcgggt
     7021 tttctacgcc gcgtcagcga gtttggctag ccgcatctct catcccaagc gtagcgaagc
     7081 gaattcgagc gatcccgttg atgttactct tcattttcgc gcggaagacg atcgctgcac
     7141 aaccgtcatt tctttttgaa aacttcgatc gcttcccacg cttcgtcggg cggagcttgt
     7201 tcgtattcga gcgcgcgctg caaatacatc ttggccagta gatcgtccgg atagaattcg
     7261 aggaaacgcg agaaaaggat ttttgcgtcg gtaaaatcgc gtgtgcgaaa tttgtctaaa
     7321 gcctcttcat acgtttccag ccatttcaaa aactccggat ccgtctcttc gcctcgggca
     7381 gcgacgaaag taaaaacgtc taccggtttg gttttgccct tcacctgcac gcgagccact
     7441 gagcgcaaat aaacttcgtc ccggactagc tcggcaaccg acgcgcctac cagcatatcc
     7501 acgccataaa ttcgggtaag cccttccagt ctggatgcga gatttactgc atcacctatc
     7561 accgtgggat ccattcgctc ctgcgaacca atgttaccaa cgatcacttc accgtggttg
     7621 acgccaatgc ccatgcccaa tcccattcgg ccttgttcgc gccagctttg attgagttgg
     7681 ctcaactgcc ggcgcattcc caacgccgcc cgcgcgcaac atttcgcgtc ctgcgccgtg
     7741 ccaagactgc gcacattgcc ccacacagcc atgatcgcgt cgccgataaa tttgtcgagg
     7801 gttcctccat tgctgaaaat ctcagaagtc atccgtgaga gatattcatt gagctgcgcg
     7861 accagcgctt cggggtcggc tttctctgcc agcgtggtga aaccaatcaa atccgagaac
     7921 aggatcgtca ccggcacgcg cataccacga agcgagctgt aatagctgtc cgggttttcc
     7981 agaatttccg cgacgagatt tttcgacaca tagcgttcga gcgtccgccg ggtgcgcaat
     8041 ttctccagcc gctcgaggaa gtattcgaac ccgagggaaa acgatccggt gaggaccagc
     8101 gccgacaaca cggggacggt gagcagcagg agtcccgtat tatcgtagag caagcgcgcc
     8161 gttccaagat atgtggccgt aagtgcaacg agtgccccca cgcaaagcaa gggcctgcgc
     8221 aagaaggcaa caagcgacca cgcgacaaga cctgctgcac ccacgagtag caagccaact
     8281 ttcggcggcg taggctgcaa aaactcgtga ccgagcgcgg cagtcatcgc ctgcaaatga
     8341 agtcccggcc ccaatgtggt cgggctcatc ggtgtatcga ccacgtcgtg caatatctgt
     8401 gcggacgcgc ccaccattac gattttgtct ttgaaaaacg cgccatcagc gtaattggca
     8461 tgccagaatt ttggatcgaa cacttcgtag agtgcacgcg gttcgtatgc gtcgaccgca
     8521 ctaaagcgaa tcatatggcc atcagaatcc tgcgggacgt cgctagcatg gccgattttc
     8581 gttaaagccc gcgcggaaag agattcgtaa gtgtcttcgc tcggatgcgg cggcaagccc
     8641 gccagttgcc gattagtcac atgataaagt acagtgcgga cttttccgtc gatgggatcc
     8701 gcccagaagt tcacgaaccc tacgcgatca tcctggagct gtggcggcgg aatcaacgca
     8761 tcgtttggcg taacggcctg cgcagcgttt cccatatcga aattggcggc catcactact
     8821 ttgtcacgat agcggtcgag cgcggcatga aacgctggat cgccctcttt ctgctggtca
     8881 aacatcatgt cgaacatcac caggcgcgca cccgcgctaa acagacgatc gagtaggagc
     8941 gcccagactt cgcgggacca cgggaatggc cgctcggtca tcacctgaaa cgcgcggtta
     9001 ttcgcgattt cctcgggcgt caatggcggc aattgcaatg tgctttggtc gagtccgaga
     9061 aaaacgaagt cattacgcgt tgcagtcttt cggccctctt tccgaagcaa atcctcgaaa
     9121 ctctgttcgc ctctccacgg cgccgaaaga aacggcgtca tcggaaagaa atgaccgaga
     9181 aaaatcaaac cggtccaaaa aacgcagatc gacgccagga tcaaaagccg atagcgacca
     9241 agccaattca cgcgcgcatt atacctctat tgcgggattt taaaatttca ttccagcggc
     9301 atgggcacca ccattaaatc actagctcgt ttaacacttc gcatccttga aaccttaaag
     9361 cgatcgatct caaagttaat tgattctgct tgactaggaa attccaaagc ctcacaaaaa
     9421 tccaagtttg atcggctcgc aaaatttctc gaaatctccc ttggaacgat ctctgttcat
     9481 atgcgcagcg gttatgatcc tcgcgggtcc gccagcgcaa ggccaggcac cgcccggctc
     9541 ggcgcaaagt cgcgcgcaat tgctgggcag gcaggcgtat ccaggcccaa gcgccacacc
     9601 cagtgtcgaa actgagggtt acccagtcac aagtcccaac gataaagaca ttggcgagca
     9661 gcagatctta aagcgggttg aagagtataa accgtttacg atttctattt actctccgtt
     9721 ttactggaca tccaatgccg cgctcgtcag caggggcgaa caagatgatg tcctggtcgc
     9781 tccaggggtt actttgatgt atgagccgcg cattaccaac acgttatacg cgcaagtcgg
     9841 cgtcgtacag caattctttt tctacgatca gcttacggaa cttaattttg ccagcctcga
     9901 cgccatcgct ggtttgcatt attacctgcc gcagttccac aacctgagcc ttcgcggata
     9961 ttatgattac aatcgcctca cggataccga caatttcgac gagatattcg tcgatcattc
    10021 catcatttta aacgccgaac tcccgtttcg gatcgcccgt gcgcaaaagc tcctggccgg
    10081 cgttgctttg aacctgagtt ttgaaggcaa tcctgaatca ctgcgtcgca acaactactc
    10141 actctacggc aactacgagg ttgctttgag tcgctttttt ttcctcgatg ccggctttca
    10201 gtttgtggtg cgtgattatt attccggcga tcgaaccgat gtgaacgaaa tactttctgt
    10261 gagcgcaaat tatcgggttc gggactggct cacgttgagt gctctcagtt ctttcgcctg
    10321 gaatcagtca aatcacagtg tcttcgatta cagcgtcgct aacatcggcg gcggcgtagc
    10381 gctgaccctg aagttctaac gtccggtgaa aaatcgctct ccttcttcag cgccgagagc
    10441 gaaaatcttt gcgtgcggtt tgctcgtttg tcttctcctg accggcacct gtttagatgc
    10501 cgcacagttg gaggaaacgc gcattacaca agtggtta
//
LOCUS       DATDAJ010000289         8562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1688312, whole genome shotgun sequence.
ACCESSION   DATDAJ010000289 DATDAJ010000000
VERSION     DATDAJ010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8562
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688312"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1037
                     /locus_tag="VIS53_07185"
     CDS             <1..1037
                     /locus_tag="VIS53_07185"
                     /inference="COORDINATES: protein motif:HMM:NF013755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HRDC domain-containing protein"
                     /protein_id="HEY5767603.1"
                     /translation="SYREKLCLVQISVPSAVIPSNFEASLGTSTSSGTTAESVCDFIV
                     DPLRNLDFKPLRHALEPREIVLHAADYDLRMLRRGLNFTASKIFDTVVAARLLGIREF
                     SLGALVKRFFGVELHKHSQKANWALRPLPPRMLQYAVDDAHYLLPLAAKLEEELERVH
                     RRDWFQQSCGRAIELAAAERERAQHELWRIGGAGALDPQTGAVLRALWQWREAEAEMA
                     DRPPFHILHSRELLKAAESFASGQVPDYRHFSARRRQTFREAAKIALQSPESQWPVMR
                     RRTGSRPTAEMRQRADQLRERRDKAAEQLGLERSFIASRGALEAIAADPARAMSLLVP
                     WQRELLGLEE"
     gene            complement(1072..1845)
                     /locus_tag="VIS53_07190"
     CDS             complement(1072..1845)
                     /locus_tag="VIS53_07190"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY5767604.1"
                     /translation="MKRFEVQAHSQVNKLPRMRRTDNPQLRRTHYLSLWPVNAKLNRL
                     CLSLFFIYGLAGCDQIGNSRHGQVTQDADNKSAQGDFERAVNLYEAALDDSPRGAEIH
                     YKLALIYDDKLNDPVSALHHFKRYLALSPNGSHAKDVKDSIKRDEIAALTTLSGDSVI
                     TRAEAARLRNENLTLHKQLEERAALRTAFEKSAGNDARKAGSKKAGQTYVVQSGDTLF
                     SISRKFYKSSKRWKAILEANKKDIRDPKDLTVGQTLVIP"
     gene            1821..2387
                     /locus_tag="VIS53_07195"
     CDS             1821..2387
                     /locus_tag="VIS53_07195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767605.1"
                     /translation="MPALQIFSSLATALLLVAMPARGALSTGNTYSISFVDLDGNKLS
                     TADGHITIVALTTSADREQARTVGDHVPDFCLGNPTYRMITVVHFTRRHLAIGRRMAT
                     AFIRHRVREEAKRLQARYDAQKISRDAKSDIFVVTDFDGTLASQLGQSAGATDFCVFV
                     FGQSGELLAQWHSVPSADELAAAVKKSD"
     gene            complement(2545..3714)
                     /gene="moeB"
                     /locus_tag="VIS53_07200"
     CDS             complement(2545..3714)
                     /gene="moeB"
                     /locus_tag="VIS53_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_257790189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HEY5767606.1"
                     /translation="MRKSIVDQERVSDAGLTKEELQRYSRHLIMPEVTIEGQKRLKAA
                     RVLCIGAGGLGSPAALYLAAVGVGRLGLVDFDRVDLTNLQRQILHGTKDIGRSKLESA
                     RDRLRDINPDIEIRLHECRLSSENAERIVADYDVIVDGSDNFATRYLSNDVCVFAAKP
                     NVYGSVFRFEGQTTVFAPQLGGPCYRCLFPEPPLPESVPNCAQAGVLGVLPGIIGMLQ
                     AIEAIKLIVGIGEPLIGRLLHFDALKVKFRELKLRRDPQCPVCGENPTILAPIDYDQF
                     CGTRDDASVPEISVQQLKAKMDAGEAFDLIDVREPFEFEIARIDGAKLIPLGEIPERA
                     DELRREQTFIVHCHSGRRSAQAVRLLKQRGFANVYNLEGGIDAWSDFIDPTVPKY"
     gene            complement(3787..4356)
                     /locus_tag="VIS53_07205"
     CDS             complement(3787..4356)
                     /locus_tag="VIS53_07205"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5767607.1"
                     /translation="MKSPPILQIAGTLLAALIICSCEEYPTPYQPGYYPRAAPAGWWN
                     DDGVSGNPRIVVHIGEQKAYFYKGKTLVGETTVSTGKPGFSTPPGRYTVLSKNADHVS
                     SLFGDYVDGYGNVVRSNIDSRKDRRPKGTHFDGARMPYAMFFRGGYAMHQGYVPPFAA
                     SHGCIRLPGRMAPRFFENAPVGTPVTVTE"
     gene            4624..5157
                     /gene="nbaC"
                     /locus_tag="VIS53_07210"
     CDS             4624..5157
                     /gene="nbaC"
                     /locus_tag="VIS53_07210"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR03037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HEY5767608.1"
                     /translation="MSSVQSPINIEKWIEENAEKFKPPVSNRYLYDGRDFFVMVIKGP
                     NARNDFHLVDSEEYFYQLKGDIKVRIREGDRIVEHIVREGETFFIPPNVPHSPQRPPD
                     TIGLVVERRRPPGEKEHVIFYCENCGALVEDINFDCKDIVDHFSQAMLEFWSDDARRT
                     CKKCGKKVEKAPPVKAL"
     gene            5234..6268
                     /locus_tag="VIS53_07215"
     CDS             5234..6268
                     /locus_tag="VIS53_07215"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5767609.1"
                     /translation="MKIDLHTHILPRDWPDLDAKYGYGGFVRLDHYKPCCARIMLGDR
                     LFREISDNVWEPTRRIEEMDGEGISMQVLSTVPVMFSYWAKPTDALDLSRRLNDHIAE
                     VVRDHPTRFTGLGTIPIQDPDLAAGELQRCVLELGLRGAQIGTHVDANPHFGRVDTLN
                     LDNAALQPVWSAAEEFNTAIFVHPWDMLGTERMPKYWLPWLVGMPAETSLAICSMIFG
                     GVFERFSKLRVAFAHGGGAFPFTVGRVDHAFHVRPDVVAAENTTSPRRYLAHDGMPAR
                     FYVDSLVHDPDALSLLIKLFGAERIAFGSDYPFSLGETHPGKLIDSMKISEKERTQLF
                     SGTVREFLGF"
     gene            complement(6324..7109)
                     /locus_tag="VIS53_07220"
     CDS             complement(6324..7109)
                     /locus_tag="VIS53_07220"
                     /inference="COORDINATES: protein motif:HMM:NF015272.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HEY5767610.1"
                     /translation="MPPLTYANYLDLEKLLTLQNPRSTPAEHDEMLFIIIHQTYELWF
                     KQLLHEFEKIERNFSAGDLFGAIHSFKRTRTIMKTLVGQIDILETMTPSSFSSFRDRL
                     ETASGFQSVQFRELEFLLGYKRAVALAHVKPDFPGADRLQRRVGERTVVDHFYDFLET
                     RGTKIPTDLKTRDVTQPNGPDERVQQEILRLYKNSPECSILFELMTDFDEGLQEWRYR
                     HVKLVERTIGAKKGTGGSPGVPFLKESLFRPVFHDLWAIRHEL"
     gene            complement(7283..8410)
                     /locus_tag="VIS53_07225"
     CDS             complement(7283..8410)
                     /locus_tag="VIS53_07225"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY5767611.1"
                     /translation="MTQTKDGSNFCKAFVTFQPGANTLSQHYFVSPEIFAEELQKIFA
                     TNWVLVGHQSQLGKPGDYFLAEVAGESLIVAKDQRSTIRAFYNVCRHRGAQLCEEQNG
                     HAAAIQCPYHAWTYALDGRLLGAPHMDETPGFNKAEYPLKPARLGLWEGFIFLNLSDA
                     SASLEKWFEPLGQKFSPWNLAALRPAKRLEYDVKANWKLIFQNYSECYHCLGVHPELS
                     KISPYDSAENDLTEGPFLGGFMRIASDKSLTMSGNACALPVGNFGDEDFRVVFYYSIF
                     PNTLLSLHPDYVMVHRLEPQSPERTLIFCDWFFNPEAFKRSDFDPEDAVEFWDMVNKQ
                     DWHVCELSQRGICSRAYEPGPYSARESIPAAWDQYYLRAMR"
BASE COUNT         1917 a         2348 c         2332 g         1965 t
ORIGIN      
        1 attcataccg ggaaaaactt tgtttggtgc agatcagcgt tccgtccgcc gttatcccga
       61 gcaacttcga agcatccctc ggaacgtcga cttcgtccgg aacgactgcc gagtcggttt
      121 gtgatttcat tgtcgaccca ttgcgaaatc tcgattttaa accactgcgc cacgcgttgg
      181 aaccgagaga aattgtgttg cacgccgccg attacgatct gcgcatgctc cgacgcggct
      241 tgaatttcac ggcgagcaaa attttcgaca cagtcgttgc ggcgcggttg cttgggatcc
      301 gcgaattcag tctcggtgcg ctggtgaagc gcttcttcgg tgtcgaactt cacaaacatt
      361 cgcaaaaggc caattgggcg ttgcgaccgc tgccgccacg gatgctgcaa tacgcagtgg
      421 acgacgcgca ttatttgttg ccgcttgctg caaaattaga ggaggagctc gagcgagttc
      481 atcgccgcga ttggtttcag caatcttgtg ggcgcgcaat tgagttggcc gccgcggagc
      541 gcgaacgcgc ccagcatgag ctttggcgca tcggaggagc cggggcgctc gatccgcaaa
      601 cgggagcggt tcttcgcgcg ctatggcaat ggcgggaggc agaagccgaa atggcagatc
      661 gaccaccatt tcatatttta catagccgcg agctcttgaa ggctgcggaa agtttcgctt
      721 cggggcaggt gcccgattac agacattttt ccgctcgacg acggcagacg ttccgcgaag
      781 cagcaaaaat tgcgttgcaa tcgccggaat cgcagtggcc cgttatgcgc cgccgcaccg
      841 gttctcgacc gaccgccgaa atgcgtcagc gcgccgatca gttgcgcgaa cggcgcgaca
      901 aagcggccga gcaacttgga ctcgagcgat ctttcattgc atcgcgcggc gctctcgagg
      961 ctattgcggc tgatcccgcg cgggcaatgt ccttgctggt cccctggcaa cgcgagttgc
     1021 tcggattaga agagtgaggc ttcggtccgg catcaacggc tatagggtta atcacggaat
     1081 caccaacgtt tgaccgaccg tgaggtcttt tggatcacga atatcctttt tgttcgcttc
     1141 caggatggct ttccaacgtt tcgacgattt gtaaaacttt cgcgaaatcg agaagagcgt
     1201 gtcgcccgac tgcacaacgt aggtttggcc tgctttcttt gatccggctt tcctggcgtc
     1261 gtttcctgcc gatttctcaa atgccgttcg caatgctgcg cgctcttcca gttgcttgtg
     1321 cagcgttaga ttttcgttgc gcaaccgcgc cgcttccgcg cgagtgataa ccgaatcgcc
     1381 ggacaacgtc gtgagcgcgg cgatctcgtc gcgcttgatc gaatccttaa cgtcttttgc
     1441 atgcgagcca tttggactta gcgcgagata gcgtttgaaa tggtgcaggg cgcttacggg
     1501 atcgttgagc ttatcatcgt aaataagagc caatttatag tggatctccg caccgcgtgg
     1561 gctgtcatct agtgcggctt catagagatt caccgcccgt tcgaaatcgc cctgggctga
     1621 tttattgtct gcatcctgcg tcacttgacc gtgacgggaa ttgcctatct gatcgcagcc
     1681 agcgagcccg taaatgaaaa acagcgagag gcaaagccgg ttcaacttcg cgtttacggg
     1741 ccatagtgaa agataatggg tacggcgaag ctgagggttg tcagtgcggc gcattctcgg
     1801 caatttgttt acttgtgagt gtgcctgcac ttcaaatctt ttcatcactg gcgacggcgc
     1861 ttcttctcgt cgccatgcct gcgcgtggcg cgctttcaac cggcaatacc tattcgatta
     1921 gctttgtcga cctcgacggc aacaaacttt ctacagccga tgggcacatc accatcgtcg
     1981 cgttaacgac gagtgccgat cgtgaacagg cgcgtacagt aggcgaccat gttccagatt
     2041 tttgtctcgg caatccgact taccggatga ttaccgttgt tcatttcacc cgccgacacc
     2101 tggcgatagg gcgccggatg gccactgcgt tcatccggca ccgggtgcgt gaagaggcaa
     2161 aacggcttca ggcgcggtat gacgcgcaga aaatctcgcg cgatgccaaa agcgacatat
     2221 ttgtcgtcac cgattttgac gggacactcg cttcgcagtt gggtcagtcg gcgggagcaa
     2281 cggatttctg cgtgttcgtc tttgggcaaa gtggggaatt gttagcgcaa tggcacagcg
     2341 ttcccagcgc cgatgaactc gctgcggccg taaagaagtc tgattaacac cgcggttcgt
     2401 tagccggtca tctcgagcga agtcgaggaa catctcggtg ctcaactgta cggtagcatc
     2461 gcgggattcc tcgactccgc cgcgcttcgc tcggaatgac catcagtgcg tccgggccaa
     2521 agccacggtg ttaatgaaat tgtctcagta tttcggcact gtcggatcga tgaagtccga
     2581 ccaggcatcg attccgcctt cgagattgta cacgttggcg aaaccccgtt gcttcagcag
     2641 tcgcacagcc tgcgcgctgc ggcgaccgct gtgacaatgt acgatgaacg tttgctcgcg
     2701 gcgcagctcg tctgcccgct cggggatttc accgagcggg atcaatttcg cgccatcgat
     2761 tcgcgcaatc tcaaattcga acggctcccg cacatcgatt aagtcgaacg cttcgcccgc
     2821 atccatcttt gcttttaatt gctgtaccga tatttcagga acgcttgcgt cgtcccgcgt
     2881 cccgcaaaac tgatcgtaat caatcggcgc caagattgtt gggttttcac cgcaaactgg
     2941 acattgcgga tcgcgccgca actttagctc gcgaaatttg accttgagcg catcgaagtg
     3001 cagcaggcgc ccaatcaacg gttcgccgat acccacgatc agtttgattg cctcaatcgc
     3061 ctgaagcatg ccgataatgc cgggcagaac gccgagtaca cccgcctgcg cgcaattcgg
     3121 gactgactcc ggcagaggtg gctcaggaaa cagacaacga taacaaggcc cgcccagttg
     3181 cggcgcaaac accgtcgttt ggccttcaaa tcgaaacacc gagccgtaaa catttggctt
     3241 cgcggcaaaa acacagacgt cattggacag gtagcgtgtg gcgaaattat ccgagccgtc
     3301 cacgattacg tcgtagtcag caacaattct ctccgcgttt tcgctggata agcggcactc
     3361 gtgcaatcga atctcgatgt ctgggttgat gtcgcgcagg cgatcgcgcg ccgattcgag
     3421 tttgctgcgg ccgatgtcct ttgttccgtg aagaatctgc cgttgcagat tggtcagatc
     3481 aacgcggtcg aaatcgacaa gcccaagtcg tcccacaccg actgctgcca gatacagcgc
     3541 agcaggggat cccaaaccac cggcgccaat gcacaaaaca cgcgctgcct tgagtcgttt
     3601 ctgtccctcg atagtcactt cgggcatgat gaggtgccgc gaatagcgtt gcagttcctc
     3661 cttcgttagg ccggcatcgg agactctttc ctggtcgaca atgcttttac gcatggctcg
     3721 ctgtacgtta gcacgctctc agcgcgaagc atgcctctac aacgagcggt cgctcgtcaa
     3781 tacgaactat tcagttaccg tcaccggagt tccgacggga gcattctcga aaaaccttgg
     3841 cgccattcgt cccggcaaac ggatgcaacc gtgggacgcg gcgaatggcg ggacatagcc
     3901 ctgatgcatt gcgtaaccgc ctctgaagaa catcgcatac ggcattcgcg cgccatcgaa
     3961 atgggttcct ttcggacggc ggtccttacg tgagtcgata tttgacctaa cgacattccc
     4021 ataaccatcc acgtaatcgc cgaacaggct cgagacgtgg tccgcatttt tcgaaagcac
     4081 cgtgtaacgt cccggtggag tcgaaaagcc aggcttaccg gtggagacgg ttgtttcgcc
     4141 gaccaaagtt ttgcctttgt aaaagtaagc tttctgctcg ccgatgtgca cgacgatccg
     4201 cggattgccg gaaacgccgt cgtcgttcca ccagcctgcg ggagcggcgc gcggatagta
     4261 gcccggctga tacggcgttg ggtactcttc gcaactgcaa ataatcagtg ctgcgagcag
     4321 cgtgcctgca atttgcaaga ttgggggact tttcacaggg cggcggatac tattcaacgg
     4381 aaggttacgc attcaactgt aaagtcgctt ttaatagggc aggtggttgc ctcgaaaagc
     4441 gccggctttc aagcgccagg tagagccgtt aggtttcaat cgagatcgga aaattcgtgg
     4501 tcgctcaaaa tcccgatgcc gaagcgggga acatacagat atgcaaaatg actacggttg
     4561 aacgtattca gccagagatg acgcagtttg acgctttgca cgcgcagaaa tacgctgatg
     4621 tctatgagca gcgtgcaatc gccgattaat atagagaagt ggattgaaga gaatgctgag
     4681 aaatttaagc cgccagtaag caaccggtat ctttatgacg gccgtgattt ttttgtgatg
     4741 gtcatcaaag gacccaacgc gcggaacgat tttcatctcg ttgattcgga agagtacttc
     4801 tatcagctca aaggggacat taaggtgcgt attcgcgaag gcgaccgcat cgttgaacac
     4861 attgtccgcg aaggcgaaac gtttttcatt ccgccgaatg tgccgcactc gccccaacgc
     4921 ccgccagaca cgatcggatt ggttgtagag cgacgccgtc cgccgggtga aaaggagcat
     4981 gtaattttct actgtgagaa ttgcggagca ctggtggaag acatcaactt cgattgcaaa
     5041 gacatcgtcg accattttag ccaggcaatg ctcgagttct ggagcgacga tgcgcgccgc
     5101 acctgcaaga aatgcggtaa aaaagtggaa aaagcgccgc cggtaaaggc gttgtaggac
     5161 attactgcag ggcgtctgtg tcagacgcct ttcgacattt gcgtttcaca aaaacgccct
     5221 acaattccac cccgtgaaga tcgatctgca cacccacatt ttgccgcgcg actggccgga
     5281 cctcgacgcg aaatacggct acggcggttt tgtgcggctt gatcattaca agccgtgctg
     5341 cgcgcgaatc atgctcggcg accgactgtt tcgcgaaatt agcgacaacg tatgggagcc
     5401 aacgcgccga attgaagaga tggatgggga ggggatctcg atgcaggtcc tttctacagt
     5461 tccggtgatg ttcagctatt gggcaaaacc gactgatgcg ctcgatcttt cccggcggct
     5521 aaatgaccac atcgccgaag tggttcgcga tcatccgacg cgcttcaccg gtctcggaac
     5581 gattccaata caggaccccg acctcgcggc aggtgaactg caacgttgcg tcctggaact
     5641 cgggctgcgc ggcgcgcaga ttggaacgca cgtggacgca aatccgcatt tcggacgcgt
     5701 agatactttg aacctcgaca atgcagcgct tcagccggtc tggagcgctg ccgaagaatt
     5761 caatactgcg atctttgttc atccgtggga catgctgggc accgagcgta tgccgaaata
     5821 ctggttgccg tggctggttg gaatgccggc agaaacgtct ctcgcgattt gttccatgat
     5881 ttttggaggc gtattcgagc gcttctcgaa gctgcgcgtc gcgtttgcgc acggcggcgg
     5941 cgcgtttcca tttaccgtcg gccgcgtcga tcacgcattt catgtgcgcc ctgatgtggt
     6001 ggccgcggaa aacacgacca gtccacgtcg ctatctcgcg catgatggca tgcctgcgcg
     6061 attttacgtc gattcacttg tccatgaccc cgacgcgctg agcttgctta tcaaattgtt
     6121 cggcgccgaa cgcatcgcat tcggttccga ttatccgttc tcattaggcg aaacgcatcc
     6181 gggaaaactg atcgactcca tgaaaatttc cgaaaaagag agaacccaac tgttttccgg
     6241 gacggtacgc gaatttctcg gattttagtt ttcggtattc gacattcgtg cttcgtcagt
     6301 ccggcagcac gaacgcgacg cggtcacagt tcgtgccgga ttgcccagag atcgtgaaag
     6361 accggcctga ataacgattc ctttaaaaac gggacacccg gtgatccgcc tgtgcctttc
     6421 ttcgcgccga tggtgcgttc cacaagtttg acgtgccgat aacgccactc ctgcagtcct
     6481 tcgtcaaaat cggtcatcaa ttcgaaaagg atcgagcatt cgggcgaatt tttgtacagg
     6541 cgcagaatct cttgctgcac gcgttcgtcc ggcccgttcg gttgcgtcac gtcgcgagtc
     6601 ttcaagtcag tcgggatctt tgtaccccgc gtttccagaa aatcatagaa gtgatccacc
     6661 accgttcgtt cgccgacccg gcgttgcagc cgatctgcgc ccggaaaatc cggcttcaca
     6721 tgcgccagtg cgacggcacg cttatagcca aggagaaact ctaattcgcg aaactgcacc
     6781 gattgaaatc ccgacgccgt ttctagccgg tctcgaaaac tcgagaacga cgacggcgtc
     6841 atggtttcga ggatgtcgat ctgaccgacc agcgtcttca tgatcgtacg cgtgcgtttg
     6901 aacgaatgga tcgcgccgaa gagatcgcct gcagaaaagt tgcgttcgat cttctcaaac
     6961 tcatggagca actgcttgaa ccacagttcg taggtttgat gaatgatgat gaacagcatc
     7021 tcgtcgtgct ccgcgggcgt tgagcgcggg ttctggagcg tgagcagttt ctcgagatca
     7081 agataattgg cgtacgtcag cggcggcata gctgcaagtg atccacagat ttcgcagatt
     7141 tacgcagatt agacaaacga gaagcaaaaa caaaagtcaa ctcagcctgt catgttgagc
     7201 gcagcgaaac atctctgatc agagattctt cgcttcgctt agaatgacaa aatcgttccg
     7261 cttttttatg cgtgggcgaa actcagcgca tcgctcgcaa gtaatactga tcccacgctg
     7321 ccggaatact ctcgcgagct gagtacggcc ccggctcata tgcgcgcgag caaatgcctc
     7381 gttggctcaa ctcgcacacg tgccagtctt gcttgttaac catgtcccaa aattcaaccg
     7441 catcttctgg atcaaaatcg ctgcgcttga atgcttccgg attaaaaaac caatcgcaga
     7501 aaatcagtgt gcgttccggg gactgcggtt caagacgatg caccatcacg taatccggat
     7561 gcagacttag cagcgtgttc ggaaaaatgg agtaatagaa aacgacgcgg aaatcttcgt
     7621 cgccgaaatt gccaacgggc aaggcgcagg cattgccgct catcgtcagg cttttgtcgc
     7681 tggcgattcg catgaatcca cctaaaaacg gcccttcggt cagatcattt tccgcggaat
     7741 cgtacggtga aattttcgac aactccggat gcacgcccag gcagtgataa cactccgagt
     7801 aattttgaaa gattaacttc caattggctt tgacgtcgta ttcgagccgt ttcgccgggc
     7861 gcagcgctgc caggttccac ggcgaaaact tttggccgag cggctcaaac catttctcca
     7921 gtgaagcaga agcatcagag agattcagga aaataaaacc ttcccaaaga ccgagccgcg
     7981 ccggcttcaa tgggtattca gccttattga atcccggcgt ctcatccatg tgcggggcgc
     8041 caagtaatcg cccatccagc gcgtacgtcc acgcgtggta cgggcactga atcgctgccg
     8101 catgtccatt ttgctcttcg caaagttgcg ccccgcggtg acggcaaacg ttgtaaaagg
     8161 cgcggatcgt cgagcgttga tctttcgcga cgatcaagct ttcgccggct acttccgcaa
     8221 ggaaatagtc gccgggtttg ccgagctggc tttgatgacc caccaacacc cagttggtcg
     8281 cgaatatctt ctgcaactct tcagcaaaaa tctccggcga aacaaagtag tgctgcgaca
     8341 gcgtatttgc gccgggctga aaagtcacaa acgctttgca aaaattcgat ccgtctttcg
     8401 tttgcgtcac agacacactg caagctgtat gcgcgatatg tttgcgtcaa cgcagttgtc
     8461 gaaacgggtc accgcgacga ccgcctcatt ccaaatcggc cgaaagggaa tttacgctag
     8521 caccgcttgg tgaaactcgt accagtcgtc gagattgttt ag
//
LOCUS       DATDAJ010000290         2766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1688595, whole genome shotgun sequence.
ACCESSION   DATDAJ010000290 DATDAJ010000000
VERSION     DATDAJ010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2766
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688595"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VIS53_07230"
     CDS             <1..306
                     /locus_tag="VIS53_07230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767612.1"
                     /translation="NTNTPQFGLIAEDVAEVNPELTVCDKTGELVTVRYDAVNAMLLN
                     EFLKEHKNVQELKATLGQQRKEIAALIAHIKEQDAKIQRVSDQLELRNSASQLAILK"
     gene            345..563
                     /locus_tag="VIS53_07235"
     CDS             345..563
                     /locus_tag="VIS53_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767613.1"
                     /translation="MNSVSQRPSTKTVRLFFEEESAPNNGGYPIEKAAVVDWAWRNRD
                     EFERSNPDHPLIHMRKAIDKLENLEVRN"
     gene            complement(579..800)
                     /locus_tag="VIS53_07240"
     CDS             complement(579..800)
                     /locus_tag="VIS53_07240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767614.1"
                     /translation="MTAKRKKNRHLITIFSLIVAVAFAILLGACADGYYATNGIRSPE
                     ARYDTYYAPDYYPYYPWDAYYGGAYYYGE"
     gene            1454..>2766
                     /locus_tag="VIS53_07245"
     CDS             1454..>2766
                     /locus_tag="VIS53_07245"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5767615.1"
                     /translation="MKRNFFWIGAFLTIVFTMFAEQPFPSPRDGNFDVIIRNGTVYDG
                     TGAEPRQADVVIRGDRIAGIGDFKSAKANTVIDAKGLAVAPGFINMLSWSTESLIQDG
                     RSQSEIRQGVTTEIMGEGESMGPVNDRVREHKIREQTDIKYDIPWNTLAEYLQYLEKR
                     GVSCNVASFIGATTIREYVIGYEDKQPTPEQLDEMRELVRKEMEAGALGIGTSLIYPP
                     AFYAKTEELIELCKVAAKYQGKYISHMRSEGNQLFEALDELLRIAREANIPAELYHIK
                     AAGKKNWPKVDELLARIEHAQNEGLKIRANMYTYTAAGTGLDACLPPWTEDGGYPALF
                     KRLRDPAMREKIKAEVQVDSDKWENLYLAAGSPDKILLVGFKSEKLKPLTGKTLAEVA
                     KMRGKDPIDTAMDLIAEDESRISTVYYVMSEENVKKELRKPWISFG"
BASE COUNT          729 a          722 c          763 g          552 t
ORIGIN      
        1 aacaccaaca caccccaatt tggcttaatc gccgaggatg tggccgaggt aaacccggaa
       61 cttaccgtgt gcgacaagac cggcgaactg gtgaccgtgc gctacgatgc cgtgaacgct
      121 atgctgctca acgagttttt aaaagagcac aagaatgtgc aggaattaaa agccactctc
      181 ggtcaacaac ggaaagaaat cgccgctctg attgcgcaca tcaaagagca ggatgccaaa
      241 atccaacgag tcagcgatca actggagctg cgtaatagcg cctcgcagct ggcaatactc
      301 aagtgacaaa tagttgtagg gcatctgtgt cagatgccaa tccaatgaac agcgtctcac
      361 agagaccctc tacaaaaacc gtcagattgt tcttcgaaga agaaagcgcc ccgaacaacg
      421 gcggttaccc gatcgagaaa gcggcagtcg tcgattgggc ctggcgcaac cgtgacgaat
      481 tcgagcgcag caatcccgac catccgctca tccacatgcg caaagccatc gacaaactcg
      541 aaaatctcga ggtgaggaac tgaaacgcgc tccgcgattc actcgccgta gtagtacgca
      601 ccgccatagt aagcatccca aggatagtac ggataataat ccggcgcgta ataggtatca
      661 tagcgcgcct cgggtgagcg aattccatta gtcgcgtagt aaccatcggc gcacgcgccg
      721 agtagaattg caaaagccac ggcgacgatc agcgaaaaga tcgtaattag gtgccgattc
      781 ttttttcgtt tagctgtcac gcgtttgggg cgctcatttg acgagacgcc tttcgcaaac
      841 gcaagctaaa aaaaattaac gcatcgacgc agccgcccaa aaggcggatt gcgccgatgc
      901 gttagccacc gcgcgtcgca aattaccagt cgccgtaaac ggtcctggtg cggtagtagc
      961 gcggaccata ggcatcgcta tagcggacgc ctgagcgtac gaccgtatcg gaggccggtc
     1021 cgtagtaggt atacgggtat gcgttatagt cgtatgtgta tcccgtataa tatccggccg
     1081 gataataacc ggtgttatac gccacgtacg gactctctgc acatcccccc agaaagcttg
     1141 ccacgaggcc tgcgcaaagg atcgatagca atactggaat gcgacgcttg gatttcggtg
     1201 tcgttttcat cagatatccc cctttgttga atttcccttt ccaattagtg agccgttcac
     1261 gcggctctgt ctggcctgtt gtttcctcat gaaacacgag gtattcagac tttcactgta
     1321 cgattcgaat ccgacgcctt gatcggtcgc cgggctggcg aaatcaaggg aacctcttgg
     1381 ggtgtggcga tatatcggcg tccgccaaag catttttgca tcattaacgg tgttcgctac
     1441 cgtcagcctc ccaatgaaac gaaatttttt ttggatcggt gcgttcctga caattgtgtt
     1501 caccatgttc gcagagcagc cgtttccgtc gccacgcgat ggaaattttg atgtgatcat
     1561 ccgcaacggc acagtttacg acggcaccgg cgccgagccg cgacaggccg atgtcgtgat
     1621 tcggggtgat cggatcgcag gcattggcga tttcaaatcg gcgaaagcga atacggtcat
     1681 cgatgcgaag gggctcgctg tcgcaccggg gttcatcaac atgctttctt ggtcaacgga
     1741 gtcgctgatt caggatggcc gctcacaaag cgaaatccgg caaggcgtca cgaccgagat
     1801 catgggcgaa ggtgaatcga tggggccggt gaacgatcgt gtgcgcgagc acaaaattcg
     1861 ggagcagacc gacatcaaat acgacatccc gtggaatacg ctggcggaat atctgcagta
     1921 tctcgaaaaa cgcggcgtgt cgtgcaatgt agcgtcattc atcggcgcga cgacgattcg
     1981 cgaatacgta atcggatacg aagataaaca gccgacgccg gagcagctcg acgaaatgcg
     2041 cgaactggtg cggaaagaaa tggaagcggg cgcactcggg atcggcactt cactgattta
     2101 tccgccggcg ttttacgcga aaaccgaaga gctgatcgag ctgtgcaagg tcgcggcaaa
     2161 ataccagggc aaatacattt cgcatatgcg cagcgaagga aatcaactgt tcgaagcgct
     2221 tgacgaactg ctgcgcatcg cgcgcgaagc gaacattccg gccgagcttt accacatcaa
     2281 agccgccggt aaaaagaatt ggccgaaagt agacgaactg ctcgcgcgaa tcgaacacgc
     2341 gcaaaacgag ggactgaaga ttcgcgccaa catgtacaca tacaccgccg ccggcacagg
     2401 cctcgatgcg tgtctgccgc cgtggacgga agacggcggg tatccggcat tgttcaaacg
     2461 tctgcgcgac ccggctatgc gcgagaaaat caaagcggaa gtacaggttg acagcgacaa
     2521 atgggaaaac ctttatctcg cggccggttc gccggacaaa atcttgttag tgggatttaa
     2581 gtcagaaaag ctgaagccgc taacgggcaa gacgctcgcg gaagtagcca agatgcgcgg
     2641 aaaagatccg atcgacacgg ccatggattt gatcgcggaa gacgaatcgc gcataagcac
     2701 cgtctattac gtaatgtccg aagagaatgt gaaaaaggaa ttgcggaagc cgtggatttc
     2761 ctttgg
//
LOCUS       DATDAJ010000291         2679 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1698522, whole genome shotgun sequence.
ACCESSION   DATDAJ010000291 DATDAJ010000000
VERSION     DATDAJ010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1698522"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="VIS53_07250"
     CDS             <1..600
                     /locus_tag="VIS53_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY5767616.1"
                     /translation="TPARMDDAAAAAIDLPILKLKLCGDDDDLARVEAVRAAAPNPRL
                     LIDANESWSPHHYRKTISALKELGVELIEQPFPADADEALQTLEHPIPICADESCHTT
                     ADLPRLKNRYEAINIKLDKTGGLTEALCLYQRARENNFKILIGCMVCTSLSIAPARLV
                     ASNADWVDLDGPLLLAHDRDHGLPYRHGKIGMPVRELWG"
     gene            complement(608..1528)
                     /locus_tag="VIS53_07255"
     CDS             complement(608..1528)
                     /locus_tag="VIS53_07255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767617.1"
                     /translation="MVLSSAATLDALKQLEITCYVPSYLTQGLRLQNVEITYDEIQEN
                     EDQNHPLPLYSIQYGNGWNATFTIESAREGIGDRNIMADEENAEETEIKSPFGPMYLI
                     YRPKGKDGRKDEIIANWVSDPNMNDEKGKGADSHPVLGRFHGFSATGITLTEFTKIIQ
                     SLHPIGGDKAHASTLTANAPAVAKSPLKIHPKVFNMIDCWISDSESPVATEINLNAVE
                     KNGNQFNEEGLKQDGDWLVYSVPDTGGFMRYRVLEAKGNHYKVEYQENGGGTLTTAST
                     IEFEIEKRHIRRNGSPMTIRVLRMSSYTQK"
     gene            1709..2446
                     /locus_tag="VIS53_07260"
     CDS             1709..2446
                     /locus_tag="VIS53_07260"
                     /inference="COORDINATES: protein motif:HMM:NF018446.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HEY5767618.1"
                     /translation="MNQRAQEIASGLPPELDALPRLGGFRLRGIAMTRLETFIDAAFA
                     FAITMLVIATQQIPDDIETLLAAFKNVPAFVASIIVLGIFWRGHWLWSRRYGLEDGVS
                     IFISWAMIVTMLIYIYPLKAIFSSMWFLVSGGRVGHVLGAHTEPQVRALFAIFALGFT
                     AIALEMVFLNLRAWQLREPLQLNARERAMTFNEVTGWTIPVGVGLVSLVLAIYLPRAQ
                     IEWSGWIYFSMVILVPLHRAYFRPKPE"
     gene            2458..>2679
                     /locus_tag="VIS53_07265"
     CDS             2458..>2679
                     /locus_tag="VIS53_07265"
                     /inference="COORDINATES: protein motif:HMM:NF024937.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 family protein"
                     /protein_id="HEY5767619.1"
                     /translation="MHYVFVLAFGIGIVAGLRSLTAPAVVAWGAHFGWLNLHGSPLAF
                     MGSTTAVAILSVLAIGELIADKLPMIPKRT"
BASE COUNT          555 a          729 c          723 g          672 t
ORIGIN      
        1 accccggcga ggatggacga tgccgctgcg gctgctatcg acttgccaat cctcaagttg
       61 aaactttgtg gcgacgatga cgatcttgcg cgtgtcgaag ctgtgcgcgc agcggcacca
      121 aacccgcgcc tactgatcga cgccaacgaa tcgtggtcac ctcatcatta ccgaaagacg
      181 atttccgcgt tgaaagaact cggagtagag ctgattgaac aaccatttcc cgccgacgct
      241 gacgaggcgc tccaaacgct cgaacatccg atccccatct gcgccgatga aagttgccac
      301 acgactgcgg atcttccgcg cctcaagaat cgctacgaag caatcaacat taagctcgac
      361 aaaaccggcg gattaacaga agcgctctgc ctgtatcagc gcgctcgcga aaataatttc
      421 aaaatactga tcggctgcat ggtctgcacc tcactctcga tcgctcccgc tcgccttgtc
      481 gctagtaacg ccgattgggt tgatctcgat ggtcccctgc tcctcgccca cgatcgtgat
      541 cacggacttc cgtatcgaca tggaaaaatc ggaatgcccg tgcgcgagtt gtggggctaa
      601 cggcgttcta tttctgagtg taagacgaca tccgaagcac gcgaatcgtc atcgggctgc
      661 cgttccggcg aatgtgtcgc ttctcaatct cgaactcgat tgtggacgct gtcgtaagag
      721 tgccgccgcc gttttcctga tactcgactt tgtaatggtt gcctttggcc tcgagcacgc
      781 ggtagcgcat gaatccgccg gtatccggca cggaataaac cagccagtcg ccatcttgct
      841 tcagcccctc ttcattgaac tggtttccat tcttctctac cgcattcaga ttgatttccg
      901 tagcgactgg actctccgaa tccgagatcc agcaatcgat catgttgaaa actttcgggt
      961 gaatcttcag cggagatttt gccactgcag gcgcgttagc ggtcaaagtg gacgcgtgag
     1021 ccttgtcgcc cccgatcggg tgaagtgact gaatgatctt agtgaactcg gtaagcgtaa
     1081 ttccagttgc agaaaatcca tgaaaccggc cgaggaccgg atgcgagtct gcgcctttgc
     1141 ctttttcgtc attcatgttg gggtcgctta cccagttcgc aatgatctcg tccttgcggc
     1201 catctttgcc ctttggccgg taaatcagat acatggggcc gaaaggcgat ttgatttcag
     1261 tttcttccgc gttctcctcg tcggccatga tgttgcggtc gccgatgcct tctcttgctg
     1321 actcgatggt gaatgtcgcg ttccagccat ttccatattg gattgagtaa agtggcaacg
     1381 gatggttctg atcttcgttc tcctggatct cgtcgtacgt gatctcgaca ttttgcaacc
     1441 ggagcccttg cgtcagatat gacggaacgt agcaagtgat ctctaattgc tttagggcat
     1501 ctaaagtcgc ggccgaagac agcaccatcg gccataagaa caacagtgcg ccaggcacaa
     1561 gagacgacag cattcgttga atcccacggc gagtcatcac tgcaacattc tgaccgagtc
     1621 cataaaattg tcgagaattg aacgcgctgc ccgcagggaa gctggcagct tcccctacag
     1681 ctgatgattg cgttattatg ccagccagat gaaccagcgc gcacaggaaa tcgcgtccgg
     1741 tttgccgccg gagttggatg cgcttccgcg gttaggcgga ttccgcttgc gcggcattgc
     1801 gatgacgcgg ctggaaactt tcatcgatgc agcattcgcg ttcgcaatca ccatgctcgt
     1861 gatcgctacg cagcaaatcc ccgacgatat cgaaacgctc ctcgctgctt ttaaaaatgt
     1921 ccccgcgttt gtggcgagca tcattgtgct gggaatcttt tggcgcggtc attggttgtg
     1981 gagccggcgt tatggcctgg aggacggtgt gtcgatcttc attagctggg caatgattgt
     2041 cacgatgttg atctacatct atccgctcaa agcgattttc agttccatgt ggtttttggt
     2101 cagcggcggt cgcgtcggtc acgtgctggg ggcccatacc gaaccgcagg tgcgcgctct
     2161 gttcgcgatc tttgcattgg gattcaccgc catcgctctg gagatggtgt tcttgaattt
     2221 gcgtgcgtgg caattgcggg agccgttaca gttgaatgca cgagaacgag cgatgacgtt
     2281 taatgaggta accggctgga ctatcccagt cggggtcgga cttgtttcgc tggtgctcgc
     2341 gatatacctg cctagagcgc aaatcgagtg gagcggctgg atttatttct caatggtcat
     2401 tctcgtgccg ttgcacagag cttactttag accgaagccg gaatagaaag cattacattg
     2461 cactacgttt tcgttctcgc ttttggaatc ggaattgtgg ccgggttgcg gtcattgacc
     2521 gcgcccgctg tcgtggcatg gggcgcgcac ttcggctggt tgaatctgca cggctccccg
     2581 cttgcattta tgggatcaac gacagccgtc gcgatacttt ccgtcctcgc gatcggggag
     2641 ttaatcgcag acaaactgcc gatgattccg aaacgtact
//
LOCUS       DATDAJ010000292        11690 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1703610, whole genome shotgun sequence.
ACCESSION   DATDAJ010000292 DATDAJ010000000
VERSION     DATDAJ010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 11690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11690
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1703610"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..713)
                     /locus_tag="VIS53_07270"
     CDS             complement(213..713)
                     /locus_tag="VIS53_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5767620.1"
                     /translation="MRKINLKEVPEQEKKSPKGKFGRITKNISIALGREPESLDLSKR
                     HPFDLALVRIPKGKFLCPYHAHAAESELYLVVSGRGNVRDKHGITEVGPGDAFFFQPG
                     EAHQLWNASNEDFVYYVVADNPRSGGATGDSCYYPDSGKWAVTTDGHEEVIVKGTETD
                     YFDGEE"
     gene            complement(743..997)
                     /locus_tag="VIS53_07275"
     CDS             complement(743..997)
                     /locus_tag="VIS53_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767621.1"
                     /translation="MNNHLWFDAIGWVGAAVLLVAYAMLSSRKWEGHSSAFQFLNIGG
                     SLLLAANTIFYGSYPSTFVNLIWAAIAIFSIATRKRVSSR"
     gene            complement(1029..1946)
                     /gene="ligD"
                     /locus_tag="VIS53_07280"
     CDS             complement(1029..1946)
                     /gene="ligD"
                     /locus_tag="VIS53_07280"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-homologous end-joining DNA ligase"
                     /protein_id="HEY5767622.1"
                     /translation="MAKKAELIVDDRKLQVSNLDKVLYPESGFTKSDVIDYYIRIAPV
                     LLPHLKDRPLTMKRYPDGVEGQFFYEKNCPVHRPKWVQTAKVWSEGNQRIMHYCLAND
                     LPTLVWAANLADLELHTSLSRKNNVERPTMMVFDLDPGAPADIVHCCQVGIWLRELLD
                     GMKLKAFAKTSGSKGLQVYVPLNTAVTYDQTKGLSRSLAQRLEREHPDRVTSNMSKAV
                     RKGKVFVDWSQNDEHKTTICVYSLRAKEEPTVSTPVSWAEVGNCLKKKRADLLKFRSD
                     QALARVEKQGDLFELVEALKQKLPKTWDT"
     gene            complement(2038..3291)
                     /gene="lpxK"
                     /locus_tag="VIS53_07285"
     CDS             complement(2038..3291)
                     /gene="lpxK"
                     /locus_tag="VIS53_07285"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEY5767623.1"
                     /translation="MLTTAVRRCCPSAVSRPESTINMGRRLEQLEEFGIDVVLERRHG
                     ARASVLRGILYALSFVYDGLVQLRLYFYRKRVFRERTLGCLVISIGNLTVGGTGKTPI
                     VEKFARALQAGGRRVAILSRGYKSVPRKRDWRSRFRGDSEPPRVVSDGKSLLLDSLTA
                     GDEPYMLAHNLKDVIVLVDKDRVKSGLFAIDKWQVDTLLLDDGFQYLHLKHRLDMVLV
                     DRQAPFGNEFLLPRGTLRERPRNLRRASYIFVTKNTGEPNFELMRRIRRYNRTAEVIE
                     CAHKPLYLQNVFTGEQLPLEALRDAFIGSLCAIAAPESFEGALAKLGAHVDLAKSYID
                     HHYYTEAELISFINRCIRRDLAMIVTTEKDSVRMPRLPDADLKVPIYFLRVEIDILSG
                     HESWEHCVARICKPKPVLPPERFFA"
     gene            complement(3227..4141)
                     /gene="thrB"
                     /locus_tag="VIS53_07290"
     CDS             complement(3227..4141)
                     /gene="thrB"
                     /locus_tag="VIS53_07290"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEY5767624.1"
                     /translation="MQQVTVRVPASTSNLGPGYDCLGVALRLYNSVTVVRCKTSRSSH
                     LQIVSDAAERFFKQTRRRTFSFSCSIVERVPRCRGLGSSATVRLGILLGLNHLSGNPL
                     DRSTVFRLCAGLEGHPDNAAPATFGGFTVVQSSASVPLARGKREACPAVYRFDVAPRL
                     YFVLLVPDLEIETARARRILPSKISRVAAVENCANACAVTAAFASRDYEKMRGSFCDK
                     LHQPFRAKLIHFLRPVIEAAERAGALGAFLSGSGSAIAAVTLEAPQKIATAMERAAAV
                     PAHTIITHADNRGAQVLPIRRQSSGIDD"
     gene            4279..5190
                     /locus_tag="VIS53_07295"
     CDS             4279..5190
                     /locus_tag="VIS53_07295"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767625.1"
                     /translation="MTTGWIDPRLLRDFQAEGTDAHRLCTIEDGWVERFGSDVLISFK
                     RVLARERLLEELQTWADSVGFQVRRVFARLIPTKSERRESPAVVIGDPSESLQTVATE
                     WYLRFGIDFGTGYSPGLFLDQRENRRYLRHIAPKRLLNCFAYTCSFSVYAACTGAGTF
                     NIDLSKKYLARGRENFALNNLSTIDHRFITDDVRSVLPRLARRGEKFDAIILDPPTFS
                     RSPEGKTFQVQDDFENLLISALAVAERDAHVLVSTNCSALGERALKVMARYCLKETRR
                     AAAFHRPLPLPDFPPRTGASSIWLALR"
     gene            5220..5531
                     /locus_tag="VIS53_07300"
     CDS             5220..5531
                     /locus_tag="VIS53_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767626.1"
                     /translation="MRIISVMDQLSPEMVAEFPERGMQWVKDRVETVVNETGEYVREK
                     PTQSLFYAFAVGYVLNRLPLGRVLAGLLRLLFMALKPAVLIYGAAKLYRSAQEREELQ
                     R"
     gene            complement(5576..5785)
                     /locus_tag="VIS53_07305"
     CDS             complement(5576..5785)
                     /locus_tag="VIS53_07305"
                     /inference="COORDINATES: protein motif:HMM:NF043052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin"
                     /protein_id="HEY5767627.1"
                     /translation="MAEHVYKKIEIVGSSPNGMEDAVQNALARAGKTIRNMRWFEVTE
                     TRGYIEDGKIEHWQVTLKIGFTLEE"
     gene            5914..6432
                     /locus_tag="VIS53_07310"
     CDS             5914..6432
                     /locus_tag="VIS53_07310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767628.1"
                     /translation="MRTSFTVCLLLTTALCCVRAQDQEKKLVDRLLKPDMALQNDAQN
                     KKFSGDGSVSINKRASVGAFYVHQKPSSKNYSGTRDFSTTQFYSKTYRGGRTASEVSS
                     QQTLANSKATYANQTARGVRDAPQSGKKVASRAYAGNRPFLGEGTNQKSLSRKNEPLT
                     IEQVRELLNKNK"
     gene            6476..7660
                     /gene="tyrS"
                     /locus_tag="VIS53_07315"
     CDS             6476..7660
                     /gene="tyrS"
                     /locus_tag="VIS53_07315"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY5767629.1"
                     /translation="MQPDEALALLKQGSAQIINESELREKLALGRPLRVKLGVDPTTS
                     DIHLGHTIVLRKLRQFQDLGHQAILIIGDFTGMIGDPSGRSVTRPHLTHQEVITNAAT
                     YREQAFKILDPERTETVCNGDWFRAMSFEDVIRLNSRVTLQQLLQREDFKARIEEKHP
                     IRAHEVQYPIMQGWDSVMVKADVELGGTDQLFNILIGRDFQREENMPQQVVFLLPILE
                     GLDGSKKMSKSLGNYVAINDSASEMFGKLMSISDELMARYYELLLRRSAPRDTHPLEA
                     KKQLAFEIVQTYHSADAAKRTLDEWNTRFSKRDLKNADLPAFSPVEQQDLTVVAVVSD
                     VYRKVFQSEKSHSEVSRLIKQGSVEIDGTKIRDPKAKVTLHPGQILRLDRKRAVRIAW
                     PE"
     gene            complement(7712..8188)
                     /locus_tag="VIS53_07320"
     CDS             complement(7712..8188)
                     /locus_tag="VIS53_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767630.1"
                     /translation="MLLEKTLHMSQPVAECKARLASIQSYRRQFLMVTRATVTSSKTV
                     DFSFRGPFGFEAHTVLLSIDGDSPNQYAFESVGGNICLMGIVDFAEIRPQCTEVTLAV
                     HYEIKNKLFAWLDRRLHFVDSFVNAELRSIRAHFEGIRSSYLERPRVMPVLQPAHA"
     gene            complement(8358..9092)
                     /gene="purQ"
                     /locus_tag="VIS53_07325"
     CDS             complement(8358..9092)
                     /gene="purQ"
                     /locus_tag="VIS53_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEY5767631.1"
                     /translation="MNFAVIQFPGSNCDQDCVAAINGLDGLQAEYVWHKETSLDNFDA
                     IVLPGGFAYGDYLRCGAIARFSPIMKAVISDARAGKLVLGTCNGFQVLCEADLLPGAL
                     VRNRSLRFVCDMVTTRVEVDDSPFTHGCPKGTVLRLPVAHGEGCFFADPQTLRELNSN
                     EQVVLRYADNQGQVVPEANPNGSIENIAGICNRKRNIFGLMPHPDRASDPRLGSADGA
                     KIFLSMMDTIRATRSTNGVEPIKQVA"
     gene            complement(9100..9282)
                     /locus_tag="VIS53_07330"
     CDS             complement(9100..9282)
                     /locus_tag="VIS53_07330"
                     /inference="COORDINATES: protein motif:HMM:NF013814.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HEY5767632.1"
                     /translation="MKALRYFFCVVFPPLAVLMTGRIASFFLSIILTLLGWIPGVIHA
                     CLVVNDYHAEQRARAH"
     gene            complement(9279..9563)
                     /gene="purS"
                     /locus_tag="VIS53_07335"
     CDS             complement(9279..9563)
                     /gene="purS"
                     /locus_tag="VIS53_07335"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEY5767633.1"
                     /translation="MNARVIVMPKAAVLDPQGNAVRDAMRHLGMPEVRSVRIGKYMEI
                     EIEGQDGELESRLHQLCRDLLSNPVIEDYELLKGESANNKMKTQRNRKSL"
     gene            complement(9614..>11690)
                     /locus_tag="VIS53_07340"
     CDS             complement(9614..>11690)
                     /locus_tag="VIS53_07340"
                     /inference="COORDINATES: protein motif:HMM:NF017964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEY5767634.1"
                     /translation="FAVFDRFGDVETFGTGELGLYYQDTRFLSRLTLKLGKDRPLLLS
                     STVREDNAVLAVDATNPDVWRDSELVVPRGTIHVFRSKILWDKACHERLRIHNYGRVA
                     VDFVLSIEFDADFADIFELRGMHRERHGRRLEPEITDDGLVLAYEGLDQRFRRTRIVF
                     DPKPSRVTKSIVSCQVHLEPGENANYQWAIACEVDGDSHGESGSYEKIMHDATTALER
                     TRAKEPQIFADNEQFNDWLNRSLADLHMMRTETRYGPYPYAGVPWFSTVFGRDGIITA
                     LQCLWFDPSIARGVLAYLAANQADAEKPEEDAQPGKVLHEFRDDEMSVLGEVPFRRYY
                     GSIDATPLFVMLAGAYYKRTGDRAFVESIWSNVQRALEWIDRYGDADGDGFVEYTRRS
                     KHGLIHQGWKDSQDSVFHSDGALAEAPIALCEVQSYVFAAKLAASELAVLLGDGAAAQ
                     ELKNQAESLRRRFEDIFWCEDLSTYALALDGSKRPCRVRTSNAGHCLFAGIATEEHAR
                     RVATTLTDETSFSGWGIRTVASNEARYNPMSYHNGSIWPHDNSLIAAGFARYDLQGSV
                     AMVLAGMMDASFFFDLHRLPELFCGFPRRPGEAPTLYPVACAPQAWASGAVFLVVQAC
                     LGLDVFAPERRLVFSKPFLPQFLPQVSIRDLKVGDASVDLLLTRHDEGDVGVNVLRRN
                     GILDVVVLK"
BASE COUNT         2706 a         3286 c         3130 g         2568 t
ORIGIN      
        1 aaatcaaacg ggtgccgctt ggaaaggtcg agcgaggccg gttcgcgtcc cagtgcttca
       61 gaaattcctt taaaggagac gacgtatttt ccgtccggcg attgccaggg atcctctttg
      121 atttgcgtga cgtttacctt cttcatcgcg cgaggtacgg gcgattgacc tcaatcgccc
      181 gcgggcgctt cggtgaaccg cccctgccca aatcattctt cgccatcgaa gtaatcggtc
      241 tcagttcctt tcactataac ttcttcgtgc ccatccgtgg tcacggccca tttgccgctg
      301 tcgggataat aacaggaatc acccgttgcg ccgccgctac ggggattatc ggcaaccaca
      361 taataaacaa agtcctcatt actcgcattc caaagctgat gcgcttcccc tggctgaaag
      421 aaaaatgcgt cgccaggtcc cacttcggtt atcccatgct tgtcgcgcac gttgccgcgg
      481 ccggaaacca ccaggtaaag ctccgattca gccgcgtgcg cgtgataggg acaaaggaat
      541 ttgcctttgg gaattcggac taatgcgaga tcaaacggat ggcgctttga cagatcgagc
      601 gactccggtt cgcgcccaag cgcaatcgaa atgttcttgg taattcggcc aaacttgcct
      661 ttcggcgatt ttttttcctg ctcaggaact tctttgaggt tgatctttcg catttagaag
      721 aaactctcgg ctctgggtta aactaacgag acgaaacgcg cttcctagtg gcgattgaga
      781 aaatggcaat ggctgcccaa atgaggttca caaatgtgga gggatacgat ccataaaaga
      841 ttgtgttcgc agccagaagg aggctgccgc cgatgttcag gaactgaaac gcagaggagt
      901 gtccttccca tttcctggag gagagcattg catacgccac aagcagaact gccgctccca
      961 cccatccaat cgcatcaaac cataggtgat tgttcatgca gcaattgatc gttttggctt
     1021 tgattcgatc atgtgtccca tgttttcggc agcttttgtt tgagcgcctc cactagctcg
     1081 aacaggtcgc cctgtttttc gacgcgcgcc agcgcttgat cggaacgaaa ctttaagagg
     1141 tcggcgcgtt tcttctttaa acaattcccc acttcagccc aactaaccgg cgtggaaacg
     1201 gttggttcct cttttgcgcg taacgaataa acgcaaatgg tggttttgtg ttcgtcgttc
     1261 tggctccaat cgacgaacac ttttcctttg cggacagctt tggacatgtt ggacgtgaca
     1321 cgatcaggat gttcgcgttc gagacgttgg gctaacgagc gcgacaaacc tttggtctgg
     1381 tcgtaagtca ccgccgtgtt cagcggcaca tatacttgta agccttttga gccgctcgtt
     1441 tttgcgaatg ctttcaattt cattccgtcc agcagctcgc gcagccagat cccaacctga
     1501 cagcagtgca cgatgtctgc aggcgcaccc ggatccagat cgaacaccat cattgttggg
     1561 cgttcgacgt tgttcttgcg ggacaacgat gtgtgcagct cgagatcggc gaggttcgct
     1621 gcccagacga gcgtgggcag atcgttagcg agacaataat gcatgatccg ttggttaccc
     1681 tcgctccaca cctttgccgt ttgcacccat tttggtcgat gcacggggca gttcttctca
     1741 tagaaaaact gaccttccac gccatctgga tagcgcttca ttgtgagcgg gcggtccttt
     1801 aagtgcggca aaagcaccgg cgctatccgg atgtaataat cgatcacgtc ggacttggtg
     1861 aaacccgact ccggataaag aactttgtcc aggttcgata cctgaagctt ccgatcgtcg
     1921 acgatgagtt ccgctttctt ggccatcgtt ctaacctcgc acaacgtcca caaaggacgc
     1981 aaaggttcta attttctctt actcttagtg actttctcct tttcggggca gaccccatta
     2041 ggcgaagaac cgctcgggcg ggagcaccgg ctttggtttg caaattcggg caacgcaatg
     2101 ttcccagctt tcgtgcccgc tcaggatgtc gatttccacc cgcagaaaat aaatcggcac
     2161 tttcagatcc gcgtcgggca gacgcggcat gcgcactgag tctttttcgg tggtgacaat
     2221 catcgccaag tcacggcgga tacaacggtt gatgaagctg ataagttccg cttcggtgta
     2281 ataatgatga tcgatgtagc ttttcgcgag atcgacgtgc gcgccgagtt tggcgagcgc
     2341 gccctcaaaa ctttcagggg cagcaatcgc gcacagcgaa ccgatgaacg cgtcgcgcaa
     2401 agcctcgagc ggcaattgtt cgccggtgaa aacattctgc aggtaaagcg gtttgtgcgc
     2461 gcattcgata acttccgcgg tgcgattgta acgccggatt cgtcgcatca gctcgaaatt
     2521 aggttcaccg gtgtttttcg tgacgaaaat gtagctggcg cggcgcagat tgcgcggtct
     2581 ctcacgcaat gtgcctcggg gcaacaggaa ctcgtttcca aaaggcgctt gtcgatccac
     2641 gagcaccata tccagccgat gctttaaatg gagatattga aatccgtcat cgagcagcag
     2701 tgtgtcgacc tgccatttat cgatggcgaa caggccgctt ttcacccggt ctttgtccac
     2761 gagtacgatc acatctttta agttatgggc gagcatgtaa ggctcatcgc cggcggttag
     2821 cgaatcgagc aacagggatt ttccgtcgga aacgacccgc ggaggttcgg aatctccacg
     2881 aaaccggctc cgccaatcgc gtttccgcgg gacgcttttg taaccacggc taagaatcgc
     2941 cactcgtcgt cctccggcct gcaaagcgcg ggcaaacttc tccacaatcg gcgttttacc
     3001 cgtaccgccg acggtaagat tgccaatgct gatcacgaga catcccagcg tacgttcgcg
     3061 aaaaactctt ttgcgataga agtaaagccg gagttgcacc aggccgtcgt agacgaacga
     3121 gagcgcgtaa aggatcccac gcaggacgga agcacgagcg ccatgacggc gttcgaggac
     3181 gacgtcgatc ccgaattctt ctaactgctc aagccggcgg cccatgttaa tcgtcgattc
     3241 cggacgactg acggcggatg ggcaacacct gcgcaccgcg gttgtcagca tgtgtgataa
     3301 tcgtgtgagc gggcacggcc gcagcgcgtt ccatggcagt tgcgattttt tgaggcgctt
     3361 cgagtgtaac agccgcgatc gcggatccgc ttccgctaag aaacgcgccg agcgcgccgg
     3421 ctcgctcagc ggcctcaatc acaggccgaa gaaagtgaat cagtttcgcg cgaaacggct
     3481 gatgaagttt atcgcaaaaa ctgccgcgca ttttttcgta atcccgcgat gcaaacgccg
     3541 cggtaactgc acaagcgttt gcacagtttt ctaccgcggc aacgcgtgag atctttgaag
     3601 gcaaaattct tcgcgcgcgc gcggtttcga tttcgaggtc cgggaccaac agaacaaaat
     3661 acaagcgcgg cgcgacgtcg aagcgataaa cggcagggca tgcctctcgc ttgccccgcg
     3721 caagcgggac gctggcgcta ctttgcacca cagtgaagcc gccgaaggtg gccggtgcag
     3781 cattatcagg atgtccttcc aatccggcgc ataatcggaa cacggttgat cgatcaagcg
     3841 ggttcccact gaggtggttc agcccaagca ggatgccgag gcgaaccgtg gcgctgctgc
     3901 ccaggccgcg acaccgcggc actcgctcca caattgaaca cgaaaacgag aacgtgcggc
     3961 gccgcgtttg cttgaaaaat cgttctgccg cgtcggacac aatttgtaaa tgagaagatc
     4021 gagacgtctt gcaccggacg accgtgacgc tgttataaag tcggagcgcg acgcccagac
     4081 aatcgtagcc aggaccgaga ttggaagtgc ttgcgggaac acgaacggtg acttgttgca
     4141 tagttacgcc gccgacacgc ggccgttgac tcggcggcgc gaacgtgatg gcggcagtgt
     4201 agcaatatca catttcccgg caacccatcc gttgcgccat accggtttcg aactatcccg
     4261 ttggagcacc gaaacaaaat gactaccgga tggattgatc cacgcttgct ccgcgatttc
     4321 caagcagagg gcactgacgc gcatcggctt tgcacgattg aggatggctg ggtcgaacgt
     4381 ttcggcagcg acgtgctgat ctcgttcaaa agagtgttgg cccgagaacg actgctggaa
     4441 gaactccaaa cctgggcgga ttcggtcggc tttcaggtgc gacgcgtctt tgcgcgtttg
     4501 attccgacaa aaagcgagcg tcgcgaatca ccggccgtgg tcattggcga tcccagcgag
     4561 agtctgcaga ccgtcgcaac ggaatggtat ctgcggttcg gcatagactt cggcacaggc
     4621 tattcgccgg gtttgttttt ggaccaacgg gagaatcgca gatacctgcg tcatatcgcg
     4681 ccaaagcgac tgctgaattg ttttgcttac acttgttcct tttccgtata cgcggcatgt
     4741 accggcgcgg gcactttcaa catcgacctt tccaaaaaat atctcgcccg tggacgcgaa
     4801 aatttcgcgc tgaacaacct atcaacgatc gatcatcgct ttatcacgga cgacgtccga
     4861 tctgtgctgc cccggctcgc ccggagaggc gaaaaattcg atgcgatcat cctcgacccc
     4921 ccgacttttt cgcgttcccc ggaaggaaaa acgtttcagg tccaggacga tttcgaaaac
     4981 ttgctcatca gcgctcttgc agtggcggag cgtgacgccc acgttctggt ctcgacgaat
     5041 tgttctgcat taggggagcg tgcgctgaaa gtgatggccc gttattgcct gaaagaaaca
     5101 cgtcgagccg cggcattcca ccggccattg ccgctgcctg atttcccacc tcgcacgggt
     5161 gcaagctcga tctggcttgc tttgcggtga tagttcgatg cgcgcaagat ggcttcaaaa
     5221 tgcgaatcat aagcgtcatg gatcagttat ctcctgaaat ggttgctgaa tttcccgaac
     5281 gcggaatgca atgggtgaaa gaccgagttg aaacggtggt caatgaaacc ggtgagtacg
     5341 tgcgcgaaaa gccgacacag tctctcttct atgcatttgc ggttggatac gtgttgaatc
     5401 gtctgccgct gggtcgagtg cttgccggac ttcttcgtct gctttttatg gcactaaagc
     5461 ccgcggtctt gatctacggt gccgccaaat tgtaccgatc ggcacaggaa cgggaagagc
     5521 tgcagcgcta aagtaaacga ttgaatcgct gaccgggcaa gcgcactcgg ggattttact
     5581 cctccagcgt aaatccgatc ttcaaagtca cctgccagtg ctcgatttta ccgtcctcga
     5641 tgtaaccgcg ggtctcggtc acctcgaacc accgcatgtt gcgaatcgtc ttaccagcgc
     5701 gcgccagggc attttggacc gcgtcctcca tgccgtttgg cgatgagcca acgatctcaa
     5761 ttttcttgta aacgtgttca gccatgcgcg cattgtctgc cgtcccaacg gcgaaaacaa
     5821 caaaaagcct tccgtcccgg cgaactggac gcgccaatca cttaagaggg aatttgcttt
     5881 acaaacgaac actcgttccg gcagcctctc gccgtgcgaa catcgtttac agtctgtttg
     5941 ctgctaacaa ctgctttgtg ctgcgtacgc gctcaggacc aggagaaaaa actggtcgat
     6001 cggcttctca agccggacat ggcgctgcag aacgatgcgc agaacaagaa atttagcggg
     6061 gacggttcgg tgtccatcaa caaacgtgca agcgtcgggg cgttttacgt tcaccagaaa
     6121 ccgagctcaa agaattattc tggaacacga gacttttcca caacgcagtt ttattctaag
     6181 acctaccgcg gcggacgtac cgcctccgag gtttcgtcac agcaaacact tgcaaattcc
     6241 aaggctacct acgcaaatca gaccgcccgc ggtgttcgtg acgcgcctca gtccgggaaa
     6301 aaggtcgcgt ctcgtgcgta tgcaggtaat cggccatttc tgggcgaagg cacaaatcag
     6361 aagtcgctca gcagaaaaaa cgagccgctc acgatcgagc aggtgcgtga gttgttgaac
     6421 aaaaacaagt agcgctcgtc agggcgacgc ggctgcgcta ttctgtgacc ggatcatgca
     6481 accggacgaa gctcttgctt tgttgaaaca aggctctgcg cagatcatca atgagagcga
     6541 actgcgcgaa aagcttgcgc tgggccggcc attgcgtgtc aagcttgggg tggacccgac
     6601 gacatcggat attcaccttg ggcacacaat tgtgttgcgc aaactgaggc agtttcagga
     6661 cctcgggcac caggcgattc tcatcatcgg cgattttacc ggaatgatcg gcgacccgag
     6721 cggccggtcc gttacgcggc cgcacctgac gcatcaggaa gtgattacaa acgcggcgac
     6781 ttatcgcgag caggcgttta agattcttga tcccgagcgc acagaaacgg tctgcaatgg
     6841 tgattggttt cgtgccatgt ctttcgaaga cgtcattcgc ttgaatagcc gcgtgacgtt
     6901 gcagcagctg ttgcagcggg aagatttcaa agcgcgaatc gaagaaaagc acccgatccg
     6961 cgcccatgaa gttcaatatc ccattatgca gggatgggat tcggtgatgg tgaaagcgga
     7021 cgtagaactc gggggcacag accaactctt caacattctt atcgggcgtg attttcaacg
     7081 agaagagaac atgccgcagc aggtcgtttt tctgctaccg attctcgaag ggttggacgg
     7141 ctccaaaaaa atgagcaaaa gcctgggtaa ctacgtcgcc atcaacgact ccgcctcaga
     7201 aatgttcgga aaactgatga gcatctcgga tgagctgatg gcgcggtatt acgaattgct
     7261 cctgcgacgc tcagcgccgc gagacacgca tccgctagag gccaagaagc aactcgcgtt
     7321 cgaaatcgtg caaacttatc actcggcaga tgcggcgaaa cgaacgctgg atgagtggaa
     7381 cacgcgcttc agcaagcgcg acttgaagaa cgccgatctg ccggcgtttt cacccgttga
     7441 acaacaagac ctcacagtcg tcgctgtcgt gtcggacgtg tatcgaaaag tgttccagtc
     7501 agaaaaatcg cacagcgaag tttcccggct catcaagcag ggaagcgtgg aaattgatgg
     7561 aaccaaaatc cgcgatccca aggccaaagt cacccttcac ccgggccaga tccttcgcct
     7621 cgaccgcaaa cgtgccgtgc gaatagcctg gcccgagtga cctaaatccc ccgatcagga
     7681 atgatttcaa cccgtaccga atgccgcttc gttaggcgtg agccggctgg aggacgggca
     7741 tgacgcgcgg gcgctccaga tagcttgacc tgatcccctc gaaatgcgcg cggatactcc
     7801 gcagttcggc attcacaaag ctatccacaa aatgcaaacg gcggtccagc caggcgaaaa
     7861 gcttgttttt aatttcgtag tgaaccgcga gtgtgacctc ggtacactgc ggccggatct
     7921 cggcgaaatc gacgatgccc atcaggcaaa tgtttccgcc gacggactcg aacgcatatt
     7981 ggttcggcga atcgccgtct atcgacagca acacagtgtg cgcctcgaaa ccgaagggtc
     8041 cgcgaaagct gaaatcgacc gtcttggatg atgtcacggt cgcccgtgtg accatcagga
     8101 actggcgacg gtaagattga atactggcca gacgtgcttt gcactcggcc accggttggc
     8161 tcatgtgtaa ggttttttct aggagcatag atttaattgg ttttcgcaac cttttatgag
     8221 caatagcgat gccacctctt ttcataaggc gaatctgggg gcaataatcc gacgtagtgt
     8281 tcgttttcgc tacaacgctg taacgatcat aacaccccag aggccaaggc tatacggttt
     8341 tcccctaggt agcgaagtca cgccacctgc ttgatgggct cgactccgtt agtggagcgt
     8401 gtcgcgcgaa ttgtatccat catggagaga aaaattttcg cgccatctgc gctaccgagc
     8461 cgcggatccg aggcgcgatc aggatgcggc atcagaccga aaatatttcg tttccggttg
     8521 caaatgccgg cgatgttctc gattgagcca tttggatttg cttccggaac cacctggccc
     8581 tggttgtccg catagcgcag aaccacttgt tcattgctgt tcagttcacg caacgtttgc
     8641 gggtcagcaa aaaaacaacc ttcgccatgc gccacaggta ggcgcaggac tgttcctttc
     8701 ggacagccgt gggtgaatgg agaatcatct acctcaacgc gcgtagtgac catgtcacaa
     8761 acaaaccgga gtgatcggtt ccgcaccagc gcgcccggca aaagatcggc ttcgcacaaa
     8821 acctgaaatc cattgcacgt tccgagcacc agcttgccgg cgcgcgcgtc gctgatcact
     8881 gccttcatga tcggcgaaaa acgagcgatc gctccgcagc gaaggtaatc gccgtacgcg
     8941 aatccacccg gcaatacgat ggcatcgaaa ttatcgaggg aagtttcctt gtgccaaacg
     9001 tattcggctt gcaatccatc aagcccatta atcgccgcga cacaatcctg gtcgcagttg
     9061 gaaccgggaa actgaatgac ggcaaagttc atggtgattt taatgcgcgc gcgcgcgttg
     9121 ctccgcgtgg taatcgttga ccacgagaca cgcatggatg actcccggta tccaacctag
     9181 caaggtcaaa atgatgctta gaaagaaact tgcgatgcgt ccggtcatca gcactgcaag
     9241 cggcggaaat accacgcaga aaaaatatcg cagcgctttc ataaactctt cctgttcctc
     9301 tgagtcttca tcttgttatt tgctgattcg cctttcaaca attcataatc ttcgatcacc
     9361 ggattcgaca gcaaatcgcg gcaaagctgg tgcagccgcg attcaagctc gccgtcttgc
     9421 ccttcgatct cgatctccat gtatttcccg attcgaacgc tgcgcacttc cggcattccc
     9481 aagtggcgca tcgcatcacg caccgcgttt ccctgcgggt ccagcacggc ggcttttggc
     9541 atgacgatca ccctggcgtt catcaccgca caatattgcg gccatctgcg gcgacaagcg
     9601 caatcaccgc catttacttc aaaaccacga cgtcaagaat gccgttccgt cgcagaacat
     9661 ttacgcctac atctccttcg tcgtgtctcg tgagtaaaag atcaacgctt gcgtctccca
     9721 ctttcagatc acgaatgctg acttggggaa gaaattgcgg caggaatggc ttcgaaaaca
     9781 caagccttcg ttctggagca aacacatcga gcccgagaca cgcttgcacc acaagaaata
     9841 cagcaccaga ggcccacgcc tgcggagcgc aggcaactgg atacaatgtg ggcgcttcac
     9901 cgggccgtcg tggaaagccg caaaatagtt ccggaagccg atgtaaatcg aagaagaagc
     9961 tcgcgtccat cataccagcg agcaccatgg caaccgaccc ctgcaggtcg tacctggcaa
    10021 accctgcggc gatcagggaa ttatcgtgcg gccaaatcga accattgtga tatgacatgg
    10081 gattgtagcg cgcctcattg ctggctaccg tgcgaattcc ccatccggaa aaggatgttt
    10141 catcggtcag cgtggtcgca acgcgccgcg cgtgttcctc cgtcgcgatc cccgcgaaaa
    10201 gacaatgacc agcattcgac gttcgcaccc tgcagggccg cttgctgccg tccaacgcca
    10261 gggcgtatgt ggaaaggtct tcacaccaga agatatcctc gaatcgccga cgcaagctct
    10321 cagcctggtt tttcagctcc tgcgcggctg cgccatcccc taaaagcaca gccaactcgc
    10381 tggcagcgag cttcgcggca aatacataac tctgcacttc gcacagcgcg atgggcgcct
    10441 cggcgagggc gccgtcgctg tggaagaccg aatcttgtga atctttccag ccctgatgaa
    10501 tgagcccgtg tttcgacctg cgggtgtatt cgacgaaacc gtcaccgtct gcgtcgccat
    10561 agcggtcgat ccactcaagc gcgcgctgga cgttcgacca aatcgactcc acaaaagcgc
    10621 ggtcacccgt gcgcttgtaa tatgcgcctg ctaacatcac aaaaagcggc gtcgcgtcga
    10681 tgctcccgta gtagcgcctg aacggcacct cgcccaagac ggacatttca tcgtcacgga
    10741 actcatgcag cacctttccg ggttgcgcgt cttcctcggg tttctcagcg tcggcctgat
    10801 tagcggcgag atacgccagg acgccgcgcg cgatcgaagg atcgaaccac aaacattgta
    10861 acgccgtgat gattccgtcg cgcccgaaca cggtgctgaa ccagggaaca ccagcgtaag
    10921 gataggggcc gtagcgcgtc tcggttcgca tcatgtggag atcggccagc gaacggttca
    10981 gccagtcgtt gaattgttcg ttgtcagcga aaatctgcgg ttccttagcg cgggtgcgtt
    11041 cgagcgcagt ggttgcgtcg tgcatgatct tttcgtatga cccgctctcg ccatgcgaat
    11101 cgccgtccac ctcgcatgca atggcccatt gataattggc attctcgccg ggctccaagt
    11161 ggacctggca gctgacaata gacttggtca cacgagatgg cttcgggtcg aacacaatcc
    11221 gcgtccggcg aaaccgttga tccaatccct catacgcgag caccagccca tcgtcagtga
    11281 tctcaggttc caagcgacga ccatgacgct cccgatgcat gccacgcagt tcgaaaatat
    11341 cggcaaagtc ggcatcgaac tcgatcgaca aaacaaaatc gacagctacg cgtccgtagt
    11401 tatgaatgcg aagccgctcg tgacaggctt tgtcccacaa aatctttgag cgaaatacgt
    11461 gtatcgttcc tcttggaact actaactcgc tgtcgcgcca gacgtcgggg ttagtagcgt
    11521 ctacggcaag aacggcgttg tcctcccgga cggtagagct cagcagcaga ggccggtcct
    11581 ttccgagctt caaagtcagc cgggataaaa atcgcgtgtc ctggtaatac aatccgagtt
    11641 cgccggtgcc gaacgtctcc acatcgccaa atcgatcgaa aacagcgaac
//
LOCUS       DATDAJ010000293         4284 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1709500, whole genome shotgun sequence.
ACCESSION   DATDAJ010000293 DATDAJ010000000
VERSION     DATDAJ010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709500"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            96..923
                     /locus_tag="VIS53_07345"
     CDS             96..923
                     /locus_tag="VIS53_07345"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5767635.1"
                     /translation="MQHRKTRRHAARALNARRNTREKEWPDKRSVYGSKKSLTEEPDD
                     VSGKGPTKAKVLVVHRIGFVRAGVLSLIARSVQFVVCGETGEAPLARELFLRHKPHLV
                     VVGLRLCGADGIQLIKEFRSLNPGAAILALSEHADAFSAQRLFRAGARACLTIEDAPE
                     LIRAFDKILTGHPYVGASVLPLILSNFVAGGKNSRSSDINNLSDRELEIFSFIGRGVS
                     VSELASELHVSVKTIETHQMRMKEKLALHSAAELRQKAREWLAKSAANRIREDPESE"
     gene            1026..1679
                     /locus_tag="VIS53_07350"
     CDS             1026..1679
                     /locus_tag="VIS53_07350"
                     /inference="COORDINATES: protein motif:HMM:NF015510.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA];
                     GO_process: GO:0044874 - lipoprotein localization to outer
                     membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEY5767636.1"
                     /translation="MRTLISWILLAVALASVATSAPISDSELKNLLAAIRQNRSTQAD
                     FQERRVIRLMKNPILSSGTVSFQPPNKFRREVKGSSPSVTVSNGRELWIYYPNFKSAE
                     RYPLGKGSPLDATVAAINSALNLENIETSFNVTAAKTENGNELQLLPRTAAMKRVFQK
                     LDLRINSEFRVERTDMLLPNGDRIVTAYSNQTRAAIPPSTFEFKPPSGTEVTTPLGQ"
     gene            1982..2311
                     /locus_tag="VIS53_07355"
     CDS             1982..2311
                     /locus_tag="VIS53_07355"
                     /inference="COORDINATES: protein motif:HMM:NF025005.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HEY5767637.1"
                     /translation="MQRILLAFCISTALVVVTWAEPSPTPSHIVSHIPREPVQSSAIA
                     KVGYSKRRHILEIEFVNGAVYRYFDIPLSVYRDLMSAESKARFYDSNIRKHYRSVLVR
                     PRQKEQH"
     gene            2770..3795
                     /locus_tag="VIS53_07360"
     CDS             2770..3795
                     /locus_tag="VIS53_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5767638.1"
                     /translation="MIYQIQGRNKSTSKSDRLGTHSPRTVFAKDIARTDHPAVTDHVE
                     AFTKQICEVIVGKNQAVKLAVACLLARGHLLIEDIPGVGKTTLSQALARSLALAFQRI
                     QFTSDLLPADILGNSIFNRTEQRFVFHRGPLFSQVVLIDEVNRATAKTQSALLEAMEE
                     QRISVDGMTYDLPEPFFVVATQNPQHAVGTFPLPESQLDRFLMRIELGVPDRTSERAM
                     LLGMDRRSMLKELKPVMSPQTLMEIQDNVRKVHASPALLDYLQDLLDASRQRHITGLS
                     PRAGLALLHASQAWALMHGRDMLLPEDIQAVGMAVMAHRLGHDLEQSGQSGLTLADNL
                     LHTVPVP"
     gene            3792..>4284
                     /locus_tag="VIS53_07365"
     CDS             3792..>4284
                     /locus_tag="VIS53_07365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767639.1"
                     /translation="MKAGKFPLAYPTAGFGALLFVLGAMWYAASSQNSAAIYLLLFLL
                     ASVFLISIPNTLTNLAGVTLRVESAKPTFAGDEVSFPVEIMNTSRSTRYRIEVVLPDA
                     DKTRERVDYIPRTSAARLTLRFASYHRGEHRIEKLNLTSCYPLGFVRASKRLLSNQTY
                     LVYP"
BASE COUNT          999 a         1177 c         1152 g          956 t
ORIGIN      
        1 gtcagggtaa atccctgaat ttttggcttg gattctgtcg gacttcgccc tacaaaacgg
       61 ctgcaactta ggacaaaccg cttaggcacg aggatatgca gcatcgcaaa accagacggc
      121 acgctgcacg cgcgttgaat gcccgacgca acacccgaga aaaagaatgg ccagacaaga
      181 ggtctgtgta cggatcaaaa aagtctctga cggaagagcc tgacgacgtg tcagggaaag
      241 gcccgacaaa agcaaaagtg ctcgttgttc accgaatagg ttttgttcga gccggtgtgc
      301 tctccttgat tgcgagaagc gtgcaatttg tggtgtgcgg cgaaacgggc gaagcgcctt
      361 tagcccgcga attgttcctg cgtcacaaac cgcatttggt tgtggttgga ttgaggctct
      421 gcggcgctga cgggatacag ttgatcaaag aattccggag cctgaatccg ggcgcggcaa
      481 tccttgccct ttccgagcac gctgatgcgt tctcggctca acgcctgttc cgggcgggtg
      541 cgcgagcatg cttgaccatc gaggacgctc ccgaactcat tagggcgttc gacaaaatct
      601 tgaccgggca cccctacgtg ggtgcaagcg tgttgcccct gatcctaagc aacttcgtgg
      661 cgggcggtaa aaattctcgt agctccgaca tcaacaacct gagcgatcgt gagctggaga
      721 ttttctcttt tatcggcaga ggcgtgagcg tttcggaatt agcgagcgaa ttgcatgtaa
      781 gcgtcaaaac gattgagaca caccagatgc gcatgaagga gaagctcgct ctgcatagcg
      841 ccgccgaatt gcgacaaaaa gccagggaat ggctagccaa atctgccgcg aaccgaatac
      901 gcgaagatcc tgaatcagaa taaggagcgt tcacgtttcc cttcgcttcg aaaaaaacgg
      961 cgttcgacac gagcagcgtc agcaccccgc tttgagaatt ttgcccagcc gaataagatg
     1021 agcgcgtgcg caccttaatc tcttggatct tacttgctgt cgcgctggcg tccgtcgcaa
     1081 cgagcgcccc tatttctgac agtgagctca agaatctgct tgcagcaatt cgacagaacc
     1141 ggtcgacgca agctgatttt caggaacgac gagtaattcg actgatgaag aatccgatcc
     1201 tgagctcggg cacagtttca tttcagccgc ctaacaagtt ccggcgcgaa gtaaaaggta
     1261 gttcgcccag cgtcacagtg agcaatggcc gcgagctgtg gatttattat ccgaacttca
     1321 aatcggccga gcgttacccg ttaggcaagg gttcgccgct ggatgccacg gtggcggcga
     1381 tcaattccgc gctgaatctg gaaaacatcg aaaccagctt caacgtcact gcggcaaaga
     1441 ccgaaaacgg aaacgagctg caactgctgc cgcgcaccgc tgccatgaaa cgagtgtttc
     1501 aaaagcttga tctgcgaatc aacagcgagt ttcgagtcga acgcacggat atgttgttgc
     1561 cgaacggcga ccggattgtc accgcgtatt ctaaccagac gcgtgcggcg attcctccgt
     1621 ccacttttga gtttaaaccg ccgtctggaa cggaagtgac cacgccgctc ggacaataga
     1681 gccggcgcta attaggaacg caggaaaatc tgcaggtggg tcggcttgtc cccaagccga
     1741 cggcagcgga cccgactcaa cgcgttggga caacgcgttc caccttccta gcttcctgat
     1801 tcaaaatttc tccaggggag atccgaccgt gctcggccag tcgcggatcc ctcaccctcc
     1861 cctttccctt gccaagggag aggcgactcg caggcgcatg tgtgctaggt cggcagtacg
     1921 caccgaatct gcctgcacct agcatcgaca gaatgccggc aatcgcgtaa gaccgatcgc
     1981 ggtgcaacgg atcttattgg ctttttgcat ttcaactgcc cttgtcgttg tcacgtgggc
     2041 agagccgtca ccgaccccaa gtcatatcgt ttcacatatt ccccgcgaac cggtgcaatc
     2101 gagcgcgatc gcaaaggttg gctacagcaa acggcgtcac attctcgaaa tcgaattcgt
     2161 taacggcgca gtttatcggt atttcgatat cccgctttcg gtgtatcgcg acctgatgtc
     2221 ggcggaatca aaagcgcgct tctacgattc caacatcagg aaacactatc gttcggtttt
     2281 ggttcggccg cggcaaaagg aacagcacta gatgcagcag aaattgtcgc acgttcgtga
     2341 cgggttttcg ttgctcgccc gaatgtttcg tctcgccctt tgggccgtaa cagaggcatc
     2401 gcgcctttct ggtcgaacag gcatccttgc ctgtttcggg atgtgcaggc tgggaagcct
     2461 gcacgacaat tccggctgga agccgaagtt actttgtggt taaaaagagc cggcgattca
     2521 agttcgatga agtgaggcaa aggtttcgcc tcacgccgac tgagagacga gtagccttgt
     2581 tcgttgccgc ggcgtttgtg cttgggttaa tgacgaaatg ttatcgcgac gcccatccgt
     2641 cccctactcc tattcaaact cattctggca agagtcgggt atcgaggtcg tcttcggtga
     2701 atattgatca accgggcgca ccgaacgcag tcaagacgac aagacgcccg cgaaaatccg
     2761 cagaaaaact tgatttatca gattcaggga cgaaacaaga gcaccagcaa aagtgacagg
     2821 ctgggaactc attccccccg caccgtgttt gcgaaagaca ttgctcgaac agatcatccc
     2881 gccgtgaccg atcatgttga ggctttcacg aaacaaattt gtgaagtcat tgttggcaaa
     2941 aaccaggcgg taaagctggc tgtcgcctgt ttgctcgcgc gcggtcacct tctaattgaa
     3001 gatattcccg gggttgggaa aacaacgcta tcccaggcac tagcgcgctc gctagccctg
     3061 gcattccagc gaattcaatt tacgagtgat ctgttgcctg ccgatatact cggtaattcc
     3121 attttcaatc ggaccgaaca acggttcgtg tttcatcgcg gcccgctgtt ttcgcaagtc
     3181 gtcctgatcg acgaggtcaa tcgcgcgacg gcgaagacgc aaagcgcgct gcttgaagca
     3241 atggaagaac agcgcatctc tgttgatggc atgacctatg atttgcccga accgtttttt
     3301 gtggtcgcga cacagaatcc gcaacacgca gtcggcacct ttccgctgcc agaatcgcag
     3361 cttgaccgct ttctaatgcg gatcgagctg ggcgtgccgg atcgcaccag cgagcgcgct
     3421 atgctgctcg gaatggatcg ccgctcaatg cttaaggagt taaaaccggt gatgagtcca
     3481 caaacattga tggagattca agataacgtg cgaaaggtgc atgcttcacc cgccttgctc
     3541 gattatctgc aggatctgct ggatgcgtct cgacaacgcc acatcacggg cctatcccca
     3601 cgcgcagggc tggcattgct tcatgcctcg caggcttggg cgctaatgca cggacgtgac
     3661 atgctccttc ccgaagacat ccaagccgtt ggaatggcag tgatggcgca tcggctaggg
     3721 cacgatctcg aacagtcggg tcaaagcgga ctgacccttg ccgataactt gcttcacacc
     3781 gtgccggtcc cgtgaaagca ggaaaatttc cgctggccta tccaactgca ggttttggag
     3841 cgctactgtt tgtgcttggc gccatgtggt acgctgcgtc gagtcaaaac agcgcggcaa
     3901 tttacctact gttgtttttg ctagcttcgg ttttcctaat ctcgattccc aatactctga
     3961 ccaatcttgc tggtgtcacc ctgagggtcg aatccgccaa gccaacattt gcgggcgacg
     4021 aggtgtcctt cccggttgag atcatgaaca cctcccgttc gacacgttat cgaatcgagg
     4081 ttgtcttgcc cgacgcagat aaaacgcgtg agcgcgtcga ctacatccct cgcacgagcg
     4141 cggcccgcct gacccttcga tttgcctcgt atcacagagg cgagcataga atagaaaaat
     4201 taaacctaac gagttgttac cctctcgggt ttgtgcgggc gtcgaagaga ttgttgtcca
     4261 atcaaaccta cctcgtctat ccca
//
LOCUS       DATDAJ010000294         3729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1715640, whole genome shotgun sequence.
ACCESSION   DATDAJ010000294 DATDAJ010000000
VERSION     DATDAJ010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3729
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1715640"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VIS53_07370"
     CDS             <1..216
                     /locus_tag="VIS53_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767640.1"
                     /translation="IVALLNDDTTEVGSVHLGIVHVFKLAEPKVEKREAMITGLTFLA
                     KDELVARRETMETWSQICLDSLGRLLL"
     gene            complement(251..886)
                     /locus_tag="VIS53_07375"
     CDS             complement(251..886)
                     /locus_tag="VIS53_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767641.1"
                     /translation="MKKIKLSSKRKSSGQVVVLLIIVLALLGGAWWWLNSNKESAAKE
                     GTAFAKEAIQKIGVQHDVNFFNSRLSPRARMNFPGSAQQEFMNEIVKLGAPVRPVDVQ
                     GKIEFNSQFFEPHGSFHARIYYPARYADMDITVSHPVGRWQIDEIAFIPQQQPGPGPV
                     PEAAPPPPAAPAPQAPPASPGEAAPQAPPVSPGAPAPQAPPASTGAPGAAG"
     gene            complement(893..1258)
                     /locus_tag="VIS53_07380"
     CDS             complement(893..1258)
                     /locus_tag="VIS53_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767642.1"
                     /translation="MKASVSELLICALALGMIFVGSSNAQTPSADAARYGPYPTYYKE
                     IIMVWLNKQLIDPDSARIEWNEEPKPSDVGKGSEAVSGYLVNFTVNARNRFGAYTGKQ
                     KHSVLIRNGEVIKSMGFGY"
     gene            1332..2765
                     /locus_tag="VIS53_07385"
     CDS             1332..2765
                     /locus_tag="VIS53_07385"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY5767643.1"
                     /translation="MRSAYVTVLYVLPVKKFLLPVAIVTAAVISSMSVLSDETYAQTP
                     IQSATSGATADKTSGSGNESATLQQPTPVDPAAATRAWLNSVPQDKREKSDAYFEGGY
                     WLILWNYLVAAAISILLLSSRISARLRDFSERLTRYKTPRIACYSVLYLLLVFVLSFP
                     LNVYEHFFREHQYGLATQSFATWFREQLIGLAIALIAGTIFFIVLYAVFRRAPKTWWI
                     WGTAIAVAFSFVLVFLAPVFIEPLFNTYKPLTKPEISESILAMARANEIPVKQVFEVD
                     ASRQTTRVSANVSGFLGTTRIALNDNLLEQCTLPEIRLVMAHEMGHYVLNHGAKLLTY
                     LGVFILIGFALTRIAFDTAIRRRGDKWDVRGIADPAGLPLLALIFCTLLFLATPFLNT
                     VVRVTEREADAFGINTAREPDGMAEVALKLGAYRKLNPTPLEEFIFYDHPSGRARIRM
                     AMDWKAANLSAGESPKSESQNPKQTGE"
     gene            complement(2771..3136)
                     /locus_tag="VIS53_07390"
     CDS             complement(2771..3136)
                     /locus_tag="VIS53_07390"
                     /inference="COORDINATES: protein motif:HMM:NF019214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HEY5767644.1"
                     /translation="MNTFALIAITWIGKEYRVFGLDWSYLVIIGLIGNATFSMRFLVQ
                     WIASERQGESVIPVSFWYWSIAGSVIMCLYFIFKRDPVGILAYLPNSLIYIRNLMLIR
                     KGGSPPTAAAPSQHPREMG"
     gene            complement(3238..>3729)
                     /locus_tag="VIS53_07395"
     CDS             complement(3238..>3729)
                     /locus_tag="VIS53_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018287377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEY5767645.1"
                     /translation="PGQCKIGIMPGYIHKPGNIGVISRSGTLTYEAVWQLTSRGYGQS
                     TCIGIGGDPIHGLSHLDCVKFFNEDPGTDAMILIGEIGGSAEEAAAEWINANCKKPVA
                     AFIAGKTAPPGRRMGHAGAIVSGGKGTAAGKIEALEAAGIAVAETPAAIADTLISRIK
                     SSA"
BASE COUNT          799 a         1026 c         1014 g          890 t
ORIGIN      
        1 attgttgcac ttctaaacga tgacacgacc gaggttggca gtgtgcatct tggcatcgtt
       61 cacgtattca aattggcgga accgaaggtg gagaagcgcg aagcgatgat caccggcctg
      121 acatttcttg cgaaagacga attggtcgct cgccgcgaaa ccatggagac gtggtcgcag
      181 atttgtctcg attcgctcgg tcgcttgttg ctgtaggcgc ttccctgtcg gaagcgaggc
      241 ctgacttctc ttagcctgca gctccaggtg caccggtaga tgcaggggga gcttgtggtg
      301 caggcgcacc tggagataca ggcggagctt gcggtgcagc ttcacctgga gatgcaggtg
      361 gagcttgcgg tgcaggcgca gctggaggcg gaggtgcagc ctcgggtaca ggtccaggcc
      421 cgggctgctg ctgcgggatg aatgcgatct cgtcaatctg ccagcggccg actggatgcg
      481 agaccgtgat gtccatatcg gcgtatctcg ctggataata tatgcgcgca tggaaagacc
      541 cgtggggctc gaagaattgt gaattgaatt caatctttcc ctgaacgtcc accggccgaa
      601 caggggcccc gagcttcaca atctcgttca tgaactcctg ttgcgccgaa cccggaaaat
      661 tcatgcgcgc ccgagggctg agccgcgagt taaagaaatt aacgtcgtgc tggacgccga
      721 ttttctggat cgcttccttg gcaaatgctg ttccttcttt ggccgcactc tctttgttgg
      781 aattaagcca ccaccaggcg ccaccaagca acgccagcac aatgatgagc agaacaacaa
      841 cttgtccgga tgatttccgc ttagaactta atttaatttt tttcatcttc gtttaataac
      901 cgaaccccat gctcttgatt acttcgccgt tacggatgag cacagaatgt ttttgcttgc
      961 ctgtgtaagc gccgaaacga tttcgtgcgt tcacagtgaa attaacgaga taaccggaca
     1021 cagcttcgct gcccttgccc acatcggatg gttttggttc ttcgttccac tcaatgcgtg
     1081 cgctatccgg atcgatcaat tgcttgttga gccacaccat aatgatttcc ttataatagg
     1141 tggggtaagg gccgtaccgc gcggcgtctg ccgaaggtgt ttgggcattt gaactgccga
     1201 cgaaaatcat tcccaacgcg agtgcgcaaa tcagcaactc cgacacggac gctttcatgt
     1261 tgtttcttta ccatcctcgg cggcggctag tccagcctaa tgaggaggta actgtcaagc
     1321 tttacagcgg aatgcggtct gcttacgtca ccgtgttata cgtcctgccc gtgaagaaat
     1381 ttttgcttcc agttgcgatc gtcaccgcgg cggtgatctc atcgatgtca gtcttatctg
     1441 acgaaactta cgcgcagact ccaattcaaa gtgccacatc aggcgccact gcggacaaaa
     1501 ccagcggctc tggcaacgag tcggccaccc tgcaacagcc cacgcccgtt gatcccgctg
     1561 cggcgacacg ggcgtggttg aacagtgtgc cgcaagacaa gcgcgaaaaa tcagatgcct
     1621 actttgaagg cggttactgg ttgattctgt ggaattatct tgtggccgcc gccatatcaa
     1681 ttctgctgct gtcctcgcgg atttcagcgc ggctacgcga tttctcggaa cgattaacga
     1741 gatacaaaac gccacggatc gcttgttaca gcgtgctgta tttgctgctc gtttttgtct
     1801 tgagctttcc gctcaacgtt tacgagcact tctttcgcga gcatcaatac ggactcgcca
     1861 cacagagttt cgcgacgtgg tttcgggagc agttgattgg tcttgcgatt gcgctcatcg
     1921 ccggcacgat ctttttcatc gtgctatacg ctgtgttccg gcgagcaccg aaaacatggt
     1981 ggatctgggg aactgccatc gctgttgctt tctcgtttgt tttggtcttc ctcgcacccg
     2041 tattcattga gcccctcttc aacacgtata aaccgcttac aaaacctgaa atcagcgagt
     2101 ccattctcgc gatggcgcga gcgaatgaaa tcccggtaaa acaggtcttc gaagtggatg
     2161 cctcgcggca gacgacgcgt gtgagcgcta atgtgtcagg attcctcggc acgacgcgaa
     2221 tcgcgctcaa tgacaatctg ctcgagcaat gcacactccc ggagatacga ttggtgatgg
     2281 cgcacgagat gggccattac gttctaaatc atggcgcgaa gttgctgacc tacctcggag
     2341 ttttcatact catcggattc gcgctcactc gaattgcgtt tgatacggct atcaggcgcc
     2401 gaggcgacaa atgggacgtg cgcggtattg ccgatccagc cgggcttccg ctgctggcgt
     2461 tgattttttg cacacttctt tttctcgcca cgccgtttct caacaccgtg gtgcgcgtca
     2521 ccgagcgtga agcggacgct tttgggatca acaccgcacg tgagcccgat gggatggcag
     2581 aggtggcgct taaacttggc gcttatcgca agctcaaccc gacgccgctc gaagaattca
     2641 tcttttacga tcatcccagc ggccgtgcac ggattcgtat ggcgatggat tggaaggcag
     2701 caaatctatc tgcgggagaa agtccgaaat ccgaatctca aaatccgaaa caaaccggcg
     2761 aataattccg tcaacccatc tcgcggggat gctgcgaagg cgcggcagcg gtgggagggg
     2821 aaccgccctt tcggatcaac atcagatttc gaatgtagat cagcgaatta ggaagataag
     2881 cgaggatgcc gactgggtcg cgcttgaaga tgaagtagag gcacatgatc acgcttccgg
     2941 cgatgctcca ataccaaaac gaaactggga tgacactttc gccctgccgc tctgaggcga
     3001 tccattgcac aaggaagcgc atcgaaaacg tggcgttccc gatcaggcca atgataacga
     3061 gatagctcca gtccagccca aagactcggt attctttacc gatccaggtg attgcgataa
     3121 gtgcgaatgt gttcatagcg tgccgttgtt taatctgtcg ccctttgttt cacaagcagc
     3181 acgctgtagc cgagggcgcc gacctgggtt gatgcctatc gcgaactccg ggtccgatta
     3241 cgcggaactc ttgatcctcg atatgagcgt gtcggcgatt gcagccgggg tttccgctac
     3301 ggcgatcccc gcagcttcca gcgcttcaat ctttcccgcg gcagttccct ttccgccgga
     3361 aacgatcgcg cctgcatgac ccatccgccg ccctggcgga gcggtttttc ccgcgatgaa
     3421 tgctgccacc ggcttcttgc agttcgcgtt gatccattcg gcggccgctt cttcggcgga
     3481 cccgccgatt tccccgatca agatcatcgc gtctgtgccc ggatcctcat tgaaaaattt
     3541 cacgcagtcg aggtgcgaca gaccgtgaat cggatcgccg ccaatcccga tgcaagttga
     3601 ttgtccataa ccgcgggacg tcaactgcca caccgcttcg taggtcagtg ttccagaacg
     3661 ggagatcacg ccaatattgc cgggcttgtg aatgtacccc ggcatgattc caatcttgca
     3721 ttgcccggg
//
LOCUS       DATDAJ010000295         4498 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1717831, whole genome shotgun sequence.
ACCESSION   DATDAJ010000295 DATDAJ010000000
VERSION     DATDAJ010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4498)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4498)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4498
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1717831"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VIS53_07400"
     CDS             <1..660
                     /locus_tag="VIS53_07400"
                     /inference="COORDINATES: protein motif:HMM:NF024045.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HEY5767646.1"
                     /translation="TNAGKSSLLNRLLGYDRVIVSDTHGTTRDTIEETVNLDGVPFRL
                     VDTAGLRASENELERAGIERTQKSLQLADLRLHIADRNSPKPAHFNGAASDPNEIVVL
                     NKSDLPEDKDWKDFPALRISCVTGGGLPQLKEEILARIRQQNLRPESAIAINTRHRDC
                     LRRALESCNRARRALGDGLSGEYAAIDLDQALRAVGEVIGVVDVEQILDSVFSQFCIG
                     K"
     gene            828..1838
                     /locus_tag="VIS53_07405"
     CDS             828..1838
                     /locus_tag="VIS53_07405"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEY5767647.1"
                     /translation="MKNSYERFVRPLLFSLDPETAHHLTIRLLGRASYFDVALHALRR
                     FQPTSKKISLFGLTFPNPIGLAAGLDKNGVALPAWAALGFGFIEIGTVTAKAQLGNPK
                     PRIFRLPEQQALINRLGFNNDGADVIAQRLRALRESGRWPAVPVGINIGKSRVTPLEQ
                     ATDDYLYSFRMLRDFADYITLNISSPNTPGLRELQEPERLSELLHAIGDEAGTAPKPL
                     VVKISPDVSDAELTAILAVCEENGVSGVIATNTTLDHSSIAPQLDQAGGLSGAPLREK
                     STALVREISARSTIPVIASGGIFDAESAREKFQAGAQLIQLYTGLVYRGPQLLREIRD
                     SL"
     gene            1908..2615
                     /locus_tag="VIS53_07410"
     CDS             1908..2615
                     /locus_tag="VIS53_07410"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767648.1"
                     /translation="MKLSRKILKFTDPLTYRRGWRRAQRSIFPVPLQPMLVQVDLDRA
                     REIQQRYAHSTAGYAKYANIEPWLRLNRERVQDLNLHRSEPRRVLDLGCGGGFFLFIL
                     KNLGHSVIGLDIDRVPLFGELLELFGVQRVVYKIDAFEPLPDLGQQFDWITAFSANFY
                     LYHPAKKRWGTPEWDFFLRDLQHHLAPGGRIFFGLNPSYNGGYYTPEIRDLFLSRGAD
                     VERERILFENGVRFQGA"
     gene            complement(2688..3119)
                     /locus_tag="VIS53_07415"
     CDS             complement(2688..3119)
                     /locus_tag="VIS53_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767649.1"
                     /translation="MSFEMNQALQWKLIAGFLLVFVAGGITGAFVGGSYARHHFFELH
                     HPERIGGRMKERLRAELNLTPEQLAKISPIIDTTTAQLRDIRRDTGQRVRRIIGDAHR
                     QMGAELTDEQRQKLKQIEERHRHWRHHRFRERSAEPPSPTP"
     gene            complement(3109..3402)
                     /locus_tag="VIS53_07420"
     CDS             complement(3109..3402)
                     /locus_tag="VIS53_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767650.1"
                     /translation="MKNEQINRLLQSAAQADEEVPAAMPFGFDTRVVALWRAGAPKAN
                     GVMQLLRRVAVLSIAVIVVSTIAAIREANQGREIRESIANEFAIADSAIQDEF"
     gene            complement(3399..3980)
                     /locus_tag="VIS53_07425"
     CDS             complement(3399..3980)
                     /locus_tag="VIS53_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY5767651.1"
                     /translation="MDDSDASALVKAALQNDDDAARALVRRLYPLVAKIVRAHRPRRT
                     PEEDLCQMIFIKVFQKLSQFSGNVPLEHWVSRVAVNTCLNQIESEKVRPEVRHADLSV
                     EEQAVVENLASSSEELAPDQRFASRQLVEHLLGALKPVERLAIDLLYLQGRSVEEIRK
                     ITGWSAALIKVRAFRARQKMKLQLAKISEKEKR"
     gene            4185..>4498
                     /locus_tag="VIS53_07430"
     CDS             4185..>4498
                     /locus_tag="VIS53_07430"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic heavy metal sensor"
                     /protein_id="HEY5767652.1"
                     /translation="MKRNLLALTAAGAIALGGFVVVQAQAGHGGRHWHGHAFGLKGLT
                     EKLDLTADQQTKVQPIVDAAKPQIAAIHQEAMQKMHTVMNSTLSQIRPILNADQQSKL
                     DA"
BASE COUNT          996 a         1249 c         1226 g         1027 t
ORIGIN      
        1 accaacgccg gcaaatcgag tttgctcaat cgcctgcttg gctacgatcg cgtgatcgtc
       61 agcgacacgc acggcacgac gcgcgataca atagaggaaa cggttaatct ggacggtgtg
      121 ccgtttcggt tggtcgacac cgcgggcttg cgcgcttcgg aaaacgaact ggagcgtgcg
      181 ggaatcgagc gcacacaaaa atcgctgcag ctagctgatt tgcggctgca catcgctgac
      241 cgcaattcgc cgaagcccgc gcatttcaac ggagccgcta gcgatccgaa cgaaattgtt
      301 gtcttgaata aaagtgattt gcccgaggac aaagactgga aggatttccc ggcattgcga
      361 atttcgtgcg taaccggagg cggactgccg caactgaaag aggaaatcct ggcacgcatt
      421 cgccagcaga atctgagacc ggagagtgcg atcgcgatca atactcgtca tcgcgattgt
      481 ctccgccgcg ccttggaatc gtgcaatcgc gcccgcaggg cgttaggcga cggactgtcc
      541 ggcgagtacg ctgcgattga tcttgatcaa gcgctgcgcg cagtcggcga agtcattggc
      601 gttgtggatg tggaacagat tctcgactcg gtgttcagcc aattttgcat cggaaaatga
      661 cgctgcaatt aatcgaaaca acagcgctgt catgttgagc gaagcgtaac atttcggttt
      721 tcttcgtgac aattggcaca gaaatgatca gggattcttc gcttcgctca gaagacacag
      781 gctgtgatga ggacctccgg gcttgaagcg ttgaggccgc ggttcaaatg aagaacagct
      841 acgagcgatt cgttaggccg ctgctgtttt ctttagatcc tgagaccgcg catcatctta
      901 cgattagact gcttgggcgt gcgtcgtatt tcgatgttgc gttgcacgcg ctcaggcgtt
      961 ttcagcccac ctcgaaaaag atcagcttat ttggcctaac cttcccaaac ccaattggac
     1021 tcgcggccgg actggacaag aacggtgttg ctcttcccgc gtgggcagcg ctcgggttcg
     1081 gttttatcga gattgggacg gtgactgcaa aagcgcagct tggaaacccc aagccgcgca
     1141 tttttcgact gccggaacaa caagcgctga tcaatcggct cggtttcaac aacgacggcg
     1201 cggatgttat tgcgcagcga ttgcgagcgc tgcgtgaaag tggccgatgg ccggccgttc
     1261 cagtgggaat caacatcggc aagtcgagag taacgccgct cgaacaagcg acagacgatt
     1321 acctttactc gtttcgcatg ctgcgggatt ttgccgatta catcacgttg aatatcagct
     1381 cgccaaatac acccggtttg cgcgagttgc aggagcctga aaggctttcg gagttactgc
     1441 acgccatcgg cgatgaagca ggaacagctc caaaaccgtt ggttgtgaaa atttcgccgg
     1501 acgtgtcaga cgccgaactg acagccattc tcgctgtgtg tgaagagaac ggcgtttcag
     1561 gagtcatcgc cacgaacacc acactggatc actcttctat tgcgccgcaa ctggatcaag
     1621 cgggcggctt gagtggagcg ccactccgag aaaaatcgac cgcattggtg cgtgaaatta
     1681 gtgctcgatc tacaattcca gtgatcgctt ccggcggaat tttcgacgca gaatcggcgc
     1741 gggaaaaatt tcaagccggc gcacaactga ttcagcttta caccggcctc gtttaccgcg
     1801 gcccgcagct tctgcgcgaa atcagggata gtttgtaggg caggcgcacg cctgccgccg
     1861 ccgttggcaa ccggagcggt tgccgtacag ttgatcgatt ttccagaatg aaactgtctc
     1921 gcaagatcct gaagttcacc gacccactaa cctaccggcg cggctggcgc agggcgcaac
     1981 gctcgatttt tcccgtgccg ctccagccaa tgcttgtgca ggtcgacttg gatcgcgcac
     2041 gtgaaatcca gcagcgatac gcccattcca ctgcgggcta cgctaaatac gcaaatatcg
     2101 agccgtggtt gcgattgaat cgtgaacgcg tgcaggattt gaatcttcat cgctcggagc
     2161 caaggcgtgt tttggatctc ggttgcggag gcggattctt cttgttcatc ctgaagaatc
     2221 tgggccattc cgtcatcggc ctcgacatcg atcgcgttcc gttgttcggc gaactactgg
     2281 agttgtttgg agtgcaacgc gtcgtttata agattgacgc tttcgagccg ctgccggacc
     2341 tcggtcaaca attcgattgg atcacggcct tctctgcgaa tttttacctc tatcatcctg
     2401 ctaaaaaacg ctggggaaca ccggaatggg atttttttct acgcgattta cagcatcatc
     2461 tggcgccggg cggaagaatc ttttttggac tcaatccctc ctacaacggc ggctattaca
     2521 cccctgaaat acgcgacctt tttctcagcc gtggcgcaga cgtggagcgg gaacgaattc
     2581 ttttcgaaaa cggggtgcgc ttccaaggcg cgtgacgcag acagtcctgt cggcaactac
     2641 tttccggctg gcagattgaa cactcgcagg caggattgcc tgcgtcacta aggcgtgggc
     2701 gacgggggtt ccgccgaacg ttcacggaag cgatgatgtc gccaatgccg atgtcgctct
     2761 tctatttgct tcagcttttg acgctgttcg tcagtcagtt cggcacccat ctggcgatgc
     2821 gcatcgccaa tgatccggcg aactcgttga cccgtatctc tccgaatatc tcgcagttga
     2881 gcagttgtcg tgtcgatgat cggcgaaatt ttggcgagtt gttccggggt cagattgagt
     2941 tcggcgcgga gcctttcttt catgcgtccg ccgatccgct cgggatgatg caattcaaag
     3001 aaatgatgcc gcgcatatga tcccccaacg aacgcgccgg tgattccacc cgcgacaaac
     3061 acgagaagga agcccgcgat gagtttccat tgcaacgcct gattcatttc aaaactcatc
     3121 ctggatggcc gaatccgcga tggcgaattc attcgcgatc gattcgcgaa tttcgcggcc
     3181 ctgatttgct tcgcgaattg ccgcgattgt cgatacgacg attacggcta tcgacaatac
     3241 ggccacgcgt cggagcagtt gcatgacgcc attcgccttt ggcgcgccag cgcgccacag
     3301 cgcgaccacg cgagtatcga atccaaacgg cattgccgcc ggaacctctt cgtccgcctg
     3361 cgccgcggat tgcagcaacc gattgatctg ttcgtttttc atcgcttttc tttttccgaa
     3421 attttcgcga gctgtagttt cattttctgc cgggctcgaa atgctcgcac cttaatgagc
     3481 gccgcgctcc agccggtgat cttgcgtatt tcttccacgc tgcgtccctg caaatataac
     3541 aaatcgattg ccagccgctc gaccggcttc agtgcaccca atagatgctc caccagttga
     3601 cgcgaagcga accgctgatc cggcgccagt tcctcgctgg agcttgccag attttccacc
     3661 accgcttgct cttccacact caagtcagca tgccgcactt ccggccttac cttttccgat
     3721 tcgatttggt tgagacaagt attgaccgca acgcgcgaga cccagtgttc cagcggcacg
     3781 ttgcccgaaa actgcgacag cttttgaaat actttaatga aaatcatttg gcagaggtct
     3841 tcctccgggg ttcgacgggg ccgatgcgcg cgtacgattt tggcaaccaa cggataaagt
     3901 cgtcgcacaa gcgcgcgagc tgcgtcgtca tcgttttgaa gcgcagcttt aaccagcgcg
     3961 cttgcgtcag aatcatccat gtgatcgaga gcgcatccac accattaacc atgaccggtt
     4021 cggctgcgct ttggttacaa cttctcgcgt agaggtgctc gtgccaagca cctgccgctt
     4081 ggcacggtcg cgtctaaaaa aatattgtaa ccgctctgct gcgcgctcgg tcatgtcttt
     4141 caaaggcgcg aagagcgctt tgcagaaaaa caatgaaacc aactatgaaa agaaacctat
     4201 tagcacttac agccgccggt gcgatcgcgc ttgggggctt tgtcgttgtg caggcacaag
     4261 cgggccatgg cggccgacac tggcatggcc acgcgttcgg cctgaagggg ctcactgaaa
     4321 agttggacct caccgctgat caacagacga aggtccagcc aatcgtggat gcggccaaac
     4381 cgcaaatcgc cgccattcat caggaggcga tgcagaagat gcatacagtg atgaacagca
     4441 cactgtcgca aattcggcca atactgaacg ctgatcagca aagcaaactc gatgcgat
//
LOCUS       DATDAJ010000296         2640 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1721645, whole genome shotgun sequence.
ACCESSION   DATDAJ010000296 DATDAJ010000000
VERSION     DATDAJ010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1721645"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VIS53_07435"
     CDS             complement(<1..321)
                     /locus_tag="VIS53_07435"
                     /inference="COORDINATES: protein motif:HMM:NF014601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEY5767653.1"
                     /translation="MSETREWPRTAVVGAGAVGGYFGGMFARAGAPTVFIGRKHFADA
                     VNSKGLVLDKSEGQERIAIEATVEMNGVRDCPLILLCVKANDTSATARQMAPFVRPDA
                     TVVCL"
     gene            complement(321..842)
                     /locus_tag="VIS53_07440"
     CDS             complement(321..842)
                     /locus_tag="VIS53_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767654.1"
                     /translation="MNWEMLTAIGQLATVCVGVPSIIYFAIQLREQTRERRQSAVNAL
                     TVQWGDLTKALHENPEFTALFLRGVHSFHDLDAVSKLRFSAFQNRFFKNFEGMYYSRR
                     EGILTLDLWSEIERTMSDFLAYDGVRQWWETRKHWHTEGFVSVVDEMIARVEKPTAYS
                     TYDLKQVVLPKDS"
     gene            complement(923..1804)
                     /locus_tag="VIS53_07445"
     CDS             complement(923..1804)
                     /locus_tag="VIS53_07445"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4440 domain-containing protein"
                     /protein_id="HEY5767655.1"
                     /translation="MNSKPSFFSELRRRNVFRVALTYAVVAWLLIEIASVLLPLVDAP
                     ESLITAFVVLLALGFAVAVFISWAFEMTPEGLKRTQDLSPTEVIPYWSRRKFATFIFG
                     VAGTAFCLSAYHLLFPAPARNLSPASEELRRGKQSEAVSISQSSPSSSPSGKPSGTQP
                     VEQLLRDLDAEWAKAAAAKDVERTIAYYSDDAIVFAPNATSAATKEAIRNGWKEMFAS
                     PGFVITWQPTRVQVGKSGEMAWVSGTYESTMNDASGKPINDRGKYLEVWEKQTDGNWK
                     CAADMWNSDLAASASAP"
     gene            complement(1801..>2640)
                     /locus_tag="VIS53_07450"
     CDS             complement(1801..>2640)
                     /locus_tag="VIS53_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767656.1"
                     /translation="RLDPDYALAYAERSEAWSFIGDLTGQHEPAWSNARSDAEKAVAI
                     APDLAEARAALGWVRFFIDWKFADGLSELKRAKELSPANPTANDLLARAIVYLGQVDD
                     ADRHARHAVELDPLSVTAQGNLARVLFVAGKLDEADAAARKAAELQPASASSRRWQTL
                     IAAQRGDGETALREAQLEPDEGYRRFELALAQYVRGDRAAADAALADLIANGRDNLAY
                     QIAEVYAVRGENDKAFEWLQISFDNHDTGTLTLLTDPLLRGLRDDARYKKFLVKLGLP
                     TAL"
BASE COUNT          589 a          774 c          706 g          571 t
ORIGIN      
        1 caaacaaacc actgtggcat ccggcctaac gaatggcgcc atttgtcttg ccgtcgccga
       61 tgtatcgttg gctttgacgc ataaaagaat gagtggacaa tctcgaacac cgttcatctc
      121 gactgtggcc tcgatcgcaa ttcgttcctg gccttctgat ttatcgagaa caagaccttt
      181 cgagttaact gcgtcagcga agtgttttcg cccgatgaaa acagtcggcg cgccagcacg
      241 agcaaacatt ccgccgaaat acccacctac cgcgcctgcg cctacgacag cagttcgcgg
      301 ccattctcga gtttcgctca ttagctgtct ttaggcagca cgacctgctt caggtcataa
      361 gtcgaatagg ccgtcggctt ttcgaccctg gctatcatct cgtctacgac agaaacaaac
      421 ccttccgtat gccagtgttt tcgcgtttcc caccattggc gcacgccatc ataggccagg
      481 aagtcgctca tggtccgttc gatctcactc cagagatcca gagtaagaat gccttcgcgg
      541 cgcgagtaat acataccctc aaaattcttg aagaaccggt tttgaaacgc gctgaagcgg
      601 agcttggaca cggcgtccag atcatggaac gagtgaacac cgcgcagaaa cagcgccgta
      661 aattcggggt tttcgtgcaa cgccttggtt aagtcacccc attgcacagt gagagcattc
      721 acggccgact gacggcgttc cctggtctgt tcacgtaact ggattgcgaa gtaaataatc
      781 gaaggaactc cgacacagac cgtggcgagt tggccgatcg cggtgagcat ttcccagttc
      841 attcagatgc tgtttcgctt tttacagtga agctgtcggt cttcaggtcc gggcaaagca
      901 acaaagccga ctggctattt ttctaaggtg cggacgcgga ggctgcgaga tcggagttcc
      961 acatgtcggc ggcacatttc caatttccat cggtttgttt ttcccagacc tcgaggtatt
     1021 tcccgcgatc attgattggc ttgccgctcg cgtcgttcat cgtcgattcg tacgtgccgc
     1081 tcacccacgc catctcgcca gacttgccga cctgcactct ggtcggttgc caagtgatga
     1141 caaatccggg actggcgaac atttctttcc agccatttcg aatcgcctcc ttcgtcgctg
     1201 cgctcgtcgc gtttggagcg aatacgatcg cgtcatccga atagtaagcg attgtccgct
     1261 cgacatcttt agctgctgca gctttcgccc attccgcatc gagatcacga agaagttgct
     1321 ccaccggctg ggtaccgctc ggttttcccg agggcgaact cgaaggtgat gattgcgaga
     1381 tcgaaaccgc ctcgctctgc ttgccgcgcc gtagctcctc cgaggcgggt gaaaggttcc
     1441 gcgcaggcgc ggggaagagc aggtgataag cagaaagaca aaacgcagtg ccggccacgc
     1501 caaagatgaa tgtcgcgaac ttgcggcggc tccaataagg aatgacctcg gtaggcgaaa
     1561 gatcctgcgt tcgtttcagt ccctccggtg tcatttcaaa agcccacgaa atgaacacag
     1621 ccaccgcgaa cccaagcgcg agcaatacca caaatgctgt gatgagtgac tccggtgcgt
     1681 cgaccagggg caaaagaacc gatgcaatct caatcagcag ccacgccacg acggcataag
     1741 tgagtgcaac cctgaaaaca ttgcgtcgcc ttagctcgga gaagaaggac ggctttgaat
     1801 tcataaggct gtgggtaaac cgagtttgac gagaaacttc ttgtaacgag catcgtcacg
     1861 caagccgcgc aacaacggat cagtaagaag agtcagtgtt ccggtatcgt gattgtcgaa
     1921 cgagatttgc agccactcga aagctttatc gttctcgcca cgcaccgcgt aaacctcagc
     1981 gatttggtag gccaaattat cccgaccgtt ggcgatgaga tcggccagcg ccgcgtctgc
     2041 cgctgcgcga tcgccgcgca cgtactgagc gagcgcgagc tcgaagcggc gataaccttc
     2101 atcgggctcc agttgcgctt ctcgcaacgc ggtctcgccg tcgccgcgct gcgcagcgat
     2161 cagcgtctgc cagcgacgac tcgaggcaga agctggctgc aactcagcgg ctttgcgtgc
     2221 cgccgcatct gcctcatcca gttttcccgc gacgaaaagg acgcgagcta gattaccttg
     2281 cgctgtaact gaaagaggat cgagttccac cgcatgtcgg gcgtgccggt cggcatcatc
     2341 gacttgcccc aaataaacga tcgcccgcgc cagcagatcg tttgcggtgg gatttgcggg
     2401 cgagagttct ttggcgcgct ttagttcgct cagtccgtcc gcgaacttcc aatcgataaa
     2461 aaagcgaacc cagcccagag ccgcgcgcgc ctccgccaga tcaggtgcga tggcgacggc
     2521 cttttccgca tcgctccgcg cgtttgacca cgccggctcg tgttgaccgg tgaggtctcc
     2581 aataaaactc cacgcttcgg aacgctctgc gtaagccaaa gcataatcag gatcgagccg
//
LOCUS       DATDAJ010000297         5062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1725662, whole genome shotgun sequence.
ACCESSION   DATDAJ010000297 DATDAJ010000000
VERSION     DATDAJ010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5062
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725662"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VIS53_07455"
     CDS             <1..373
                     /locus_tag="VIS53_07455"
                     /inference="COORDINATES: protein motif:HMM:NF014819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     II"
                     /protein_id="HEY5767657.1"
                     /translation="LESAHVSAADVDYINAHGTATVFNDATEGKAITALFKGVPMSST
                     KSMMGHSLGAAGAIEAVICLLALQHQFLPANINFTAPDDDVDLNIVANEARPAAVSVA
                     LSNSFGFGGTNASLIMRKLQA"
     gene            370..1497
                     /locus_tag="VIS53_07460"
     CDS             370..1497
                     /locus_tag="VIS53_07460"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY5767658.1"
                     /translation="MSLAIAGMGWVTPLGTGVDSVWERLLQGEEASATTISEPFVDRV
                     YNVFRVPESAVKGISHPRLRRASAISRFAAAAGLHALESAGLKLGSHNAERIALIFAI
                     SNGGVIYTKRFYHEIVGTGAQSASPLLFPETVFNAPASHLAAILGVTGATYTLVGDGA
                     VGLAAITMAEELMANEALDHCLVVGTEEIDWLLCDAYRRWRLLRLAPPIEPFSKQNRG
                     MILSEGAGAIVLAREGFVTIERTHPGGHFRRRTEAEKVLKRILCDLGQIEIDFVISSA
                     NGTFVDQAEFQALHEIVPNALAYTGKPALGESVGAAGLWQIILAAQALHSEEVPPVLH
                     ADLSIPLRLSLSRTPIPSARRAIVLGCGLNQQAAGLRMAIQ"
     gene            1691..2365
                     /locus_tag="VIS53_07465"
     CDS             1691..2365
                     /locus_tag="VIS53_07465"
                     /inference="COORDINATES: protein motif:HMM:NF013427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA C4-type zinc finger protein"
                     /protein_id="HEY5767659.1"
                     /translation="MAKSKKKNRSAAKSAVRKPRPARKLQTRKPKPKNSARGKKIARR
                     SPKTNLEGTESPAALLGLNHREKRLDPFVRKQKQKLLQLRDAVVDSMAGVAQGTLRSR
                     AEGSEASAFGMHQADAGSDAYDRDFALSLLSQEQDALYEIDEALKRVELGTYGKCEMS
                     GKPIPHARLEAIPFARFTVECQSQLEKQSKATRMRPSVTSLFGLTEEEGAESEEEEAT
                     PSEVKE"
     gene            2375..2548
                     /gene="rpmG"
                     /locus_tag="VIS53_07470"
     CDS             2375..2548
                     /gene="rpmG"
                     /locus_tag="VIS53_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEY5767660.1"
                     /translation="MAQEIVTLECTEAKALGKPPSRYMTTRNKKSPRTPNRLEKKKYN
                     PFLRRRTLHRETR"
     gene            2555..2794
                     /gene="rpsR"
                     /locus_tag="VIS53_07475"
     CDS             2555..2794
                     /gene="rpsR"
                     /locus_tag="VIS53_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEY5767661.1"
                     /translation="MQPKTPKRRSAFRRANRPMPRRRIDIAMEAIDYKNPDLLKKFVT
                     ESGKILPRRVTGMPAYMHRKITREIKRSRSVLLMK"
     gene            complement(3060..3422)
                     /locus_tag="VIS53_07480"
     CDS             complement(3060..3422)
                     /locus_tag="VIS53_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767662.1"
                     /translation="MFQIIFNELSAAEISALPKRLQLELLAEFQILPEDLDQLDSERF
                     GVIERKGKKLYRYRAKNYRIYFAKTEEGVKVHRVLHKNTLRDFLFRSKLPVSEDAQLG
                     ETREFWKLIEEGERTPKG"
     gene            complement(3511..4599)
                     /gene="alr"
                     /locus_tag="VIS53_07485"
     CDS             complement(3511..4599)
                     /gene="alr"
                     /locus_tag="VIS53_07485"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY5767663.1"
                     /translation="MKETYRCWAEIDRAALRHNAKVVRDRIGSAEMLAVVKANAYGHG
                     LVGVAEALADDAQLFGVANLQEALTLRESLPHPIVILGPATPEERPVIAERGFIPTIS
                     GLEEAQAFDRLKRVSVNFKIDTGMGRMGVVQNEAREVFRRVAAMANVEIHSISTHMPV
                     SNEDAEYTRDQLVRFRRIVDQIRAEVPGNYKAHVLQSAGTLAFNQPTFEIVRAGIMLY
                     GISPLPEFRELLKPVMTWKTRICLVREVPKGSSISYGRTFIAPRNMRVATLSAGYADG
                     YPWHLSNRGAGVLVHGKRCPLLGRVTMDLIVIDVSGLDDVKVGDDVVLMGRDGSEEIP
                     CSELGEKAGTITWEIITRIGARVRRVYV"
     gene            complement(4596..>5062)
                     /locus_tag="VIS53_07490"
     CDS             complement(4596..>5062)
                     /locus_tag="VIS53_07490"
                     /inference="COORDINATES: protein motif:HMM:NF013012.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767664.1"
                     /translation="RRKFGAPETIVVGLGPGSYAGTRIAISAAIGIQLSCDARLIGYP
                     SICAMECDAQEYCAIGDARRKSFFFARILKNEAIEGPTLFSELELKARLESLDPATPV
                     FSSELLPQFHRPLISFPSAFILAKLAKESRRSFCLPPLEPIYLREPHITMPK"
BASE COUNT         1147 a         1399 c         1376 g         1140 t
ORIGIN      
        1 tctcgagagc gcgcatgtct ctgcggccga cgttgattac atcaatgcgc atggcactgc
       61 cacggtcttc aacgatgcaa ccgagggcaa ggcaatcacc gcattgttta agggtgtgcc
      121 gatgagctca accaaaagca tgatgggtca ttcccttggc gccgcgggcg ccatcgaggc
      181 cgtcatttgt ttgcttgcgc ttcaacacca atttcttccg gctaacatca atttcaccgc
      241 tccagatgac gatgttgatc tcaacatcgt cgcgaacgaa gcgcgtccag ctgcggtgag
      301 cgtggccctt tcgaactcgt ttggatttgg tggaacgaac gcttcgctaa taatgcgcaa
      361 gctccaagca tgagtctggc gattgctggt atggggtggg ttactcctct gggcaccggc
      421 gttgattcgg tttgggagcg attgcttcag ggtgaggaag catctgcgac gacgatttcc
      481 gaaccattcg tcgatcgcgt ttacaacgtt tttcgcgtgc cggaatcagc ggtgaagggg
      541 atttctcatc cgcgtcttcg tcgcgccagt gctatttcgc gttttgccgc ggcggctgga
      601 ttgcacgcgt tggagtctgc aggactaaaa ctcgggtcgc acaatgctga acgaatcgcg
      661 cttatcttcg ccatctcaaa tggaggcgtc atttacacga aacgttttta ccatgaaatc
      721 gtcgggacag gcgcgcagtc agcgagtccg ctgctgtttc cggaaactgt attcaatgcg
      781 ccggcaagcc atcttgccgc catcctcggt gtgaccggcg ctacgtacac cctcgtgggc
      841 gacggcgccg tcggcctcgc tgcgataaca atggccgagg aattgatggc gaatgaagcg
      901 ctggaccatt gtctcgttgt aggcaccgaa gaaatcgact ggctgttatg cgatgcttac
      961 cggcggtggc gtttgttgcg tctggcaccg cctattgagc ccttcagcaa gcagaaccgc
     1021 ggaatgattt tgagcgaagg cgcaggagcg atcgttctcg cacgcgaggg attcgtcacg
     1081 atcgaacgca cgcatccggg cgggcatttt aggagacgaa ccgaagcgga aaaagttttg
     1141 aagcgcatcc tctgtgatct tggccaaata gaaatcgatt ttgttatttc gagcgcgaat
     1201 gggacgtttg tcgatcaagc agaattccaa gcgcttcatg agatcgttcc aaatgcgctc
     1261 gcctacacgg gtaaacccgc cttgggggaa agcgttggcg ctgcagggtt atggcagatc
     1321 attctggcag cccaagcact gcattcggaa gaggtcccgc ccgtgcttca cgcggacctc
     1381 agcatcccgt tacggctttc actctcgcgg acgccgattc caagtgcccg acgcgcgatc
     1441 gttttaggct gcggacttaa tcagcaagcg gcaggtttgc gaatggcgat tcagtaacac
     1501 gccgggcgat tttattgtgg tacgcctggt cataaatccc gctgggatgc tgaacgttac
     1561 agttgaatat cgtgaacgaa gcgaggcgaa agtttttggc gaatccgctt gcgtgctgag
     1621 ataaacgttc ttaattaagc gtccattttc cctgcgccag tcgattaaaa tggcgcttac
     1681 cacagtcacc atggccaaat caaagaaaaa gaacaggtct gcagcaaagt cggctgtacg
     1741 aaagccgcgg ccagctcgca aacttcagac taggaagccc aagccgaaaa attccgctcg
     1801 tggaaagaag atcgcgcgcc gttcgccaaa aaccaacttg gaaggcaccg agtcgcccgc
     1861 agcgttactg ggattaaatc atcgcgaaaa aagattggat ccgttcgttc gcaaacaaaa
     1921 acaaaaattg cttcagcttc gcgatgcagt agtcgattcg atggctggcg tggcgcaggg
     1981 tacccttcgc tcgcgcgctg aaggcagcga agcttccgct ttcggaatgc atcaggccga
     2041 cgccggatcg gacgcttacg atcgcgattt cgcgctgagt ttgctctcac aagaacagga
     2101 cgcgctttac gaaatcgatg aggcgctaaa gcgcgtcgag ctcggaacat atgggaagtg
     2161 cgaaatgtcc ggcaaaccca tcccgcatgc acgtctcgag gcgattccct ttgcccgttt
     2221 caccgtggag tgtcaatcgc agttggagaa gcagagtaaa gccacccgga tgcgaccatc
     2281 agttacttct ttgtttggct tgaccgaaga ggagggcgcc gaatccgaag aagaagaggc
     2341 cactccgtcg gaagtgaagg agtaatcgac gtctatggct caggagattg ttaccctcga
     2401 atgcaccgaa gctaaagcgc ttggaaagcc accttcgcgt tacatgacga cgcgcaataa
     2461 aaaaagccca cggacgccga atcgcttgga gaagaaaaaa tacaatccgt ttttgcggcg
     2521 gcgcacctta caccgcgaga ccaggtaatc agccatgcag ccaaaaactc caaaacgccg
     2581 ttccgcattt cgtcgcgcca atcggcccat gccgcggcgc cggatcgata tcgccatgga
     2641 ggcaatcgat tataagaacc ctgatcttct gaaaaaattt gtcacggaga gcggcaaaat
     2701 tctgcctcgt cgcgttaccg gcatgcccgc atacatgcac cggaaaatca cgcgcgaaat
     2761 caagcgcagc cgttccgtgc tgttgatgaa gtgacaaacg catgtgcgtt tgtcatcctg
     2821 agcgaagcga aggatctctc gtaagttcgc tgttaccctc atttgcccgc ctcatccgcg
     2881 cttcgactgc gagatttctc gctccgctcg gaatgacctt gcgcagttaa gcgtcgccgt
     2941 tcgtgttgtt cgaagtagtt gtagaggcgc tcgccgcggc gcgcgcctgg ttctcgcttc
     3001 agcgtttcga tcctgacccg ctcgagcttg attcgaggtg agtgtcgcca accgtggctt
     3061 taccccttcg gcgtccgctc gccttcctca atcaacttcc agaactcgcg cgtttcgccc
     3121 aattgcgcgt cctcggaaac aggcagcttg ctgcggaaca gaaaatcgcg aagcgtgttt
     3181 ttgtgcaaaa cgcgatgcac tttgacgcct tcctcggtct tggcgaagta aatacggtaa
     3241 ttctttgcgc gatagcgata cagcttcttc cctttgcgtt cgatcacgcc gaaacgctcg
     3301 gaatcgagct gatccaaatc ttcgggtaaa atttgaaact cggccagcaa ctcaagctgc
     3361 aaccgttttg gtaacgctga gatctcggct gcgctcagtt cattgaagat gatttggaac
     3421 attatttcgt taaacaggtg aagcgttgaa gcgctttgaa cttagctcgc gactttgatc
     3481 cgcttcaacg cttcaacgct tcaacgaccg tcaaacataa acccggcgca ctcgcgcgcc
     3541 aattcgcgtg ataatttccc acgtaatggt cccggccttt tcgcccaatt cagagcaggg
     3601 aatttcttcg ctgccgtcgc gccccatgag aacaacatcg tcgcctacct ttacgtcatc
     3661 cagcccgctc acatcgataa ctatcagatc cattgtcacc cgtccgagaa gagggcagcg
     3721 ctttccgtgc accaaaacgc cggcgccacg attggagaga tgccacgggt atccgtcagc
     3781 atagccggct gacaaggttg caacgcgcat atttcgcggc gcgataaagg tgcggccata
     3841 gctgatggag ctgcctttcg gcacttcgcg cacgagacaa attcgtgttt tccacgtcat
     3901 caccggcttg agcaactcac gaaattccgg gagcggcgaa atgccgtaga gcatgatacc
     3961 ggcgcgcacg atttcgaacg tcggctgatt gaaggcgagt gtgccggcgc tttgcaacac
     4021 gtgcgccttg tagttccccg gaacttctgc gcgaatttgg tccacgattc ttcggaatcg
     4081 gacgagctgg tcgcgcgtgt attctgcgtc ttcgttcgac accggcatat gcgtcgatat
     4141 gctgtggatc tcgacatttg ccattgccgc cacgcgtcgg aaaacctcgc gtgcctcatt
     4201 ctgcacgacg cccattcgcc ccataccggt gtcgatcttg aaattgactg acacccgttt
     4261 caatcgatcg aacgcctggg cttcctctaa accggagatc gtcgggataa atccgcgctc
     4321 ggcgattacc gggcgttcct caggagttgc cgggccgaga atcacgattg gatgcggcag
     4381 cgattcgcgg agtgtgagag cttcttgcag attggcgacg ccaaataatt gtgcgtcatc
     4441 ggccagcgct tccgcgacgc cgaccaatcc atggccgtaa gcattcgctt tcacgacggc
     4501 gagcatctca gcggatccga ttcgatcccg cacgactttc gcattgtgtc gcaacgcggc
     4561 gcgatcaatt tcagcccagc agcggtaagt ttctttcatt ttggcatggt gatgtgcggt
     4621 tcgcgcaaat aaattggttc cagcggtggc agacaaaagc ttcgtcggga ctccttcgca
     4681 agtttggcca gaatgaaagc cgagggaaac gaaattaagg ggcggtgaaa ctgcggaagc
     4741 aactctgaag agaaaaccgg cgttgccgga tcgagcgatt cgagtctcgc tttcagctca
     4801 agctcggaaa agagcgttgg accttcaatc gcttcatttt tgaggatgcg cgcaaagaaa
     4861 aaagatttcc tgcgcgcgtc gccaatcgca cagtattcct gcgcatcgca ttccattgcg
     4921 caaatcgagg gatatccgat caaacgtgca tcacaagaaa gttgtatccc gatcgcggcc
     4981 gaaatcgcga tgcgcgttcc agcatacgag ccggggccaa gtccgacaac gatcgtttcc
     5041 ggagcgccaa attttcttcg ca
//
LOCUS       DATDAJ010000298         2055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1731680, whole genome shotgun sequence.
ACCESSION   DATDAJ010000298 DATDAJ010000000
VERSION     DATDAJ010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731680"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VIS53_07495"
     CDS             complement(<1..981)
                     /locus_tag="VIS53_07495"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEY5767665.1"
                     /translation="MSYLELLKLASPEAVVAVTALIVLSVGLVAKRAAVACAFVAALG
                     IVIAIVAVTFLPGNETLFGGMLVISPLTSLFKIICLALAFFTILLAQAEKAPRHPGEY
                     LALVLLATVGLMLLVGSEELLMIFIGLELLGLSLYVMAAFDKTDARSAEAGVKYFLFG
                     STSSAFTLFGISLIYGMLGATGLAAIATKLAITSVQPLLAVGIVMTLVGFAFKIAAAP
                     FHLWAPDAYQGAPVPSAAFIASGSKVASFVVLGKIVLIGFSPVHGSAGWHAMVAGWSP
                     VLAALAALSIVIGNLVALAQSNVRRLLAYSAVAHAGYTLIGFVAGDREGFS"
     gene            complement(1028..>2055)
                     /locus_tag="VIS53_07500"
     CDS             complement(1028..>2055)
                     /locus_tag="VIS53_07500"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY5767666.1"
                     /translation="EYGAMKLTLYSFFGGMFVFVGILVAYVSGGSLDLNQLSQFEFSP
                     HLQSWAFPVLFLGFAVLAGIWPLHTWAPTGHAAAPTAGSMLLAGIVMKLGSYAALRVA
                     MNLFPQGFQMWSKWIAVLAVIGIVYAAAVALRQRDLKFVIGYSSVSHMGFVLLGFATA
                     NALGVSGAVLQMFSHGVIAALLFAVAGRMIYPRTHTRELDALSGMNLSHAMPFAAFTF
                     VVAAAASMGIPGFSGFAAEITILIGAWKTYPIAVWIAGIGIVLVAAFTLRALKQSFFG
                     EKSIQAEVTKVTTVTTLSREEFNPITIPEKIGACMLMLTTLAVGIYPKLLLDRIMPAV
                     EAMRFLK"
BASE COUNT          536 a          603 c          556 g          360 t
ORIGIN      
        1 agaaaatcct tcgcggtcac cggcgacgaa gccgattaat gtgtaacccg cgtgtgcgac
       61 cgctgagtag gcaagcagcc tgcgtacgtt cgattgcgca agcgcgacga gattgccgat
      121 cacgatcgac agcgccgcta gtgccgcgag gacaggcgac cagccggcca ccatcgcgtg
      181 ccatccggcg ctgccatgca ccggcgaaaa cccgatgagc acgatttttc ccagcacaac
      241 aaacgacgca accttcgaac ccgaagcaat gaacgccgcg ctcggaacag gcgcgccttg
      301 atacgcatca ggcgcccaca gatggaacgg cgcggcagcg attttgaatg cgaagccgac
      361 aagcgtcatg acgattccaa cggcaagcag cggctgcact gacgttattg ccaacttagt
      421 tgcgattgcg gcgagaccgg ttgcccctaa catgccgtaa atcaggctga tcccaaagag
      481 cgtgaacgcg ctcgacgtgc tgccgaacaa aaaatatttc acaccggctt cggccgaacg
      541 cgcgtccgtt ttatcgaatg ctgccatcac gtacagcgac agtccaagta actcgaggcc
      601 gatgaaaatc atcagcagtt cttcactccc gacgagcagc atcaggccga ccgttgccag
      661 aagaacaagc gccagatatt cgccgggatg acgcggcgcc ttttctgcct gcgccagcag
      721 gatcgtgaaa aatgcgagcg cgaggcaaat gattttgaac agtgacgtca ggggcgagat
      781 caccagcatt ccgccaaaca gcgtctcgtt gcccggcaaa aacgtgactg ccacgattgc
      841 aatcacaatt cccagcgctg caacaaatgc gcacgccacc gctgcccgtt tcgcaacgag
      901 accgactgaa agcacaatca gcgcagtcac agctacgacc gcttcaggtg atgcaagttt
      961 gagaagctcg agataagaca tcgttaaagc gttgaagcgt taaatcgttg aagcgggggg
     1021 agacgtgtca tttcaagaac ctcatggcct ccaccgcggg catgatgcgg tcgagcagca
     1081 gcttcggata aatgccgacg gcgagtgtgg tgagcatcag catgcaggcg cctattttct
     1141 ccgggatcgt gatcgggttg aactcttccc gacttaatgt tgtaaccgtt gtaacttttg
     1201 taacttcagc ttggatgctt ttctcaccga agaacgattg ctttaacgcg cgcaatgtga
     1261 atgcagcgac gagaactatc ccaattcccg cgatccaaac ggcaatcggg taagttttcc
     1321 acgcgccgat tagaatcgtg atctcggccg cgaatccgct gaagccgggg atacccattg
     1381 aggcagccgc cgcgaccacg aaagtgaaag ccgcgaaggg catcgcgtgg ctcagattca
     1441 ttccagaaag agcatcgagt tcgcgcgtgt gcgtgcgcgg gtagatcatg cgtcctgcaa
     1501 cggcgaacaa aagcgccgcg atgacaccgt gcgagaacat ttgcagcacc gcaccggaaa
     1561 ctccgagcgc gttggccgtg gcaaaaccga gtagcacaaa gcccatatga ctcacgctcg
     1621 aataaccgat tacaaatttc agatcacgtt gccgaagcgc tactgctgcg gcatacacga
     1681 ttccgatcac tgcgagcaca gcaatccatt tgctccacat ctgaaatccc tgcggaaaaa
     1741 gattcatcgc gacgcggaga gcggcgtaag agccgagctt catcacaatt cccgcgagca
     1801 acatcgaacc cgcagtcgga gcagcggcat gaccagtcgg cgcccaggtg tgcaggggcc
     1861 aaatgccggc cagcacagca aagccgagaa acaacaccgg aaacgcccac gattgcaggt
     1921 gcggtgaaaa ttcgaactgc gacagctgat tcaggtccaa tgacccgcca ctgacataag
     1981 cgaccaagat tccgacgaac acgaacatcc cgccgaaaaa ggaatacagg gtgagcttca
     2041 tcgcgccgta ttcct
//
LOCUS       DATDAJ010000299         3138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1736194, whole genome shotgun sequence.
ACCESSION   DATDAJ010000299 DATDAJ010000000
VERSION     DATDAJ010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1736194"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..1163)
                     /locus_tag="VIS53_07505"
     CDS             complement(288..1163)
                     /locus_tag="VIS53_07505"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEY5767667.1"
                     /translation="MRSMTGYGRGETDHDGTKFTVELNSVNRKQSDVVVNLPRDLVEL
                     EPRIRQTINENISRGRTNATVSLHSGENGARKLALNTELARSYHEAMRSLQKELNAPG
                     EITIATILQAPGVMRFPEEALNPEDTWPAVERALRAALVDLIKMREREGKHLAKDLIH
                     RLKAIRKKLKEVRALHPDVVKRYRATLLDRIQKAGLPLANEDERVLKEITFFADRADV
                     SEELTRLESHLAQFAHHLRSKEPVGRTLEFITQEIFRELNTLGAKANDAAISQRVIGC
                     KAELEKIREQVQNLE"
     gene            complement(1192..2199)
                     /gene="mutY"
                     /locus_tag="VIS53_07510"
     CDS             complement(1192..2199)
                     /gene="mutY"
                     /locus_tag="VIS53_07510"
                     /inference="COORDINATES: protein motif:HMM:TIGR01084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEY5767668.1"
                     /translation="MTSPENLAVFRRSLVRWFRRHGRDLPWRRTRDPYAILVSEFMLQ
                     QTQVATVIPYYHEWLRRFPDFASLARASQNEVLRAWQGLGYYARARNLHAAAKTVINR
                     HGGNFPRGIEQMRQFSGIGKYTAHAVASFAFDQSVPIVEANTGRVLTRLFNFRASIDS
                     DAGRKTLWQHAASLLPKSNAATFNSALLDLGALICVARKPKCDVCPVEAFCCARDPAA
                     LPVRKSRPETKRLIETHALIVRRGQILLEQSGHRWRGMWVLPPLEPKYLEQQPFQRRP
                     VYESVFPFTHHRVTLSVYRRAAPKRIAPGQQWFGSIEEVAMPSPHRQAAQSLIQTLVE
                     R"
     gene            2301..>3138
                     /gene="rnhC"
                     /locus_tag="VIS53_07515"
     CDS             2301..>3138
                     /gene="rnhC"
                     /locus_tag="VIS53_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HEY5767669.1"
                     /translation="MNSYTQLLSPEQVRKLRSLLDESGFEFTPKEWTIFFAQKNKLSV
                     AVYEKGPKVLVQGRGVEEFVQFELEPKVLGEAKLGYEEVHLPEMFEPHFGVDESGKGD
                     FFGPLVISGVYVDRGIARKLFDGGVVDSKRISSDARIRALADTIRKTSQGFVETVLIG
                     PAKYNELYEKFGNLNRLLGWGHARVIENLLARKPGCPRSLSDQFADARVIKESLMRHG
                     RNIVIEQRPRAESDIAVAAASIIAREGFINWLERKGKEFGMRLERGVSPGVKETAKKL
                     VGK"
BASE COUNT          689 a          809 c          922 g          718 t
ORIGIN      
        1 ctcagggctt gaacgacagt ggtctttccc gcgcccgatg gagcggaaat gacgaagaga
       61 attccgtgtc ggctgaattt cattagcttg tcattctgag cgaagcgaag aatctcagac
      121 tacttctctc ttcgctcacc aagccaatag tcagagatgt ttgaaagcct ggcctcatgc
      181 ttcgcatttc gttgcagcgc ttcgctcaac atgacaaaga gaacgctcgc ttcaacagat
      241 cgcgatcggt ggcggcgcga ttcgggtcca tttggccaaa gggttgctta ctcaagattt
      301 tgaacttgct cgcggatctt ctccagttcg gccttgcagc cgatgacgcg ttgggagatt
      361 gcagcgtcat tcgctttcgc tccgagcgtg ttgagttcgc gaaaaatctc ctgcgtgatg
      421 aattccaatg tgcgtccaac cggctctttg ctgcgcaaat gatgagcaaa ttgagcaaga
      481 tgactttcaa gtcgcgtcag ctcttccgat acatcggcgc gatcggcaaa gaacgtaatt
      541 tctttcaaga cacgctcgtc ctcgttagcc agcggcagcc cagctttttg tatccgatcg
      601 agaagcgtcg cgcgataccg tttcaccacg tccggatgca gtgcccggac ttccttgagt
      661 ttttttcgaa ttgctttgag acggtgaatc aaatctttgg ccagatgttt gccctcgcgc
      721 tctcgcattt ttatgagatc taccagcgcc gcgcgcagag cgcgttcaac tgccggccat
      781 gtatcttcgg ggttcaacgc ttcctccggg aaccgcatca cgccgggcgc ttgcaggatc
      841 gtcgcgatcg tgatctcgcc gggcgcgttt aattccttct gcaacgagcg catcgcttcg
      901 tgatacgagc gggcgagttc cgtattgaga gccagcttcc gcgcgccgtt ctcgccgcta
      961 tggagactga ccgtcgcgtt cgtgcgaccg cgcgaaatat tttcgttgat tgtctggcga
     1021 atgcgcggct cgagctcaac gagatcgcgc ggcaaattga ccacgacgtc gctctgtttc
     1081 cggttcacgg aatttagctc gacagtaaat tttgttccgt cgtgatcggt ctcgccacga
     1141 ccgtatccag tcatgcttcg catacctcga aatcttatcg cagagaaata ttcaacgttc
     1201 aacgagcgtt tggatcaagc tttgcgctgc ttgccgatgg ggtgaaggca ttgcgacctc
     1261 ctcgatcgat ccaaaccact gctgtccggg agcgattcgc tttggtgcag cgcgacgata
     1321 cacagaaagc gtgactcgat gatgggtgaa tggaaacacg gactcgtaaa ctggccgtcg
     1381 ctgaaaaggc tgctgctcta aatatttagg ttcgagcggc ggcaagaccc acatgccgcg
     1441 ccatcgatgg ccggattgct cgagcagaat ttggccgcgc ctaacgatta atgcatgcgt
     1501 ttcgatgagt cgtttcgttt cgggtctcga tttccgtacg ggaagcgcgg caggatctct
     1561 tgcgcagcaa aacgcttcaa ccgggcacac atcgcatttc ggcttccggg ctacgcaaat
     1621 aagcgcgcca agatcgagaa gtgcggagtt gaaagtcgcc gcattggatt ttggaagaag
     1681 gctcgctgca tgttgccaaa gcgttttgcg gcccgcgtcg gaatcgatcg atgcgcgaaa
     1741 attgaaaagt cgcgtcaaaa cgcgaccggt gttcgcttcg acgatcggaa ccgattgatc
     1801 aaaggcaaag ctggctacgg catgcgcggt gtatttgccg attccggaaa attgtcgcat
     1861 ttgctcgatt ccgcgcggga aatttccgcc atgccgattg ataaccgttt ttgctgcggc
     1921 gtggagattt cgcgcgcgcg cgtaatagcc gaggccttgc cacgcgcgaa gcacctcatt
     1981 ttgcgaggcc cgcgccagtg aggcgaaatc gggaaacctg cgcagccact cgtgataata
     2041 cgggattacg gtggcgacct gcgtttgctg gagcatgaac tcggaaacga gaattgcgta
     2101 cggatcgcgg gttcggcgcc acgggagatc gcgcccatgc ctacgaaacc aacgaacaag
     2161 cgagcggcga aaaacggcaa ggttctctgg cgatgtcacg ggtttgggag cgaacgtcca
     2221 actcccaagg ctcaacgtcc aatgccgaat tcagagttga gcattgggcg ttgagcgttg
     2281 agcgttcggc gttttccgaa atgaattctt acactcaact actttcgcct gagcaagtga
     2341 gaaagcttcg cagcttgctc gacgagtcag ggttcgagtt cacgccgaaa gagtggacta
     2401 tattttttgc ccaaaagaac aagctgagcg tagcggtcta tgaaaaagga ccaaaggtgc
     2461 tggtgcaggg ccggggcgtc gaggagttcg tgcaattcga attggagcct aaagttctgg
     2521 gcgaagcgaa gctcggctat gaagaagtgc acttgcccga aatgttcgaa ccgcatttcg
     2581 gtgtggacga gagcgggaag ggcgatttct tcgggccctt ggtaatatcg ggggtttacg
     2641 ttgatcgggg gatcgcgcgc aagcttttcg acggcggcgt ggtggacagc aagcggatca
     2701 gctcggatgc gcgaattcgc gcgctggcgg acacgattcg gaaaacttca caaggtttcg
     2761 tggaaacggt tctgatcggc ccggccaagt acaacgagct atacgagaag tttggcaatt
     2821 tgaaccggct cctcggttgg gggcacgcac gtgtgatcga gaatttgctg gcgcgaaagc
     2881 ctggctgtcc gcggtcttta tcggaccagt tcgccgacgc gcgagtaatc aaggagtcct
     2941 tgatgaggca tgggcgcaac attgtcattg aacaaaggcc gcgtgcggaa tccgacatcg
     3001 cggtggcggc ggcatcgatc attgcgcgtg agggattcat caattggctc gaacgaaaag
     3061 gcaaagagtt cggtatgcgc ttggaacgcg gcgtgtctcc cggggtgaaa gagaccgcaa
     3121 aaaagctagt cggaaaga
//
LOCUS       DATDAJ010000300         4812 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1746298, whole genome shotgun sequence.
ACCESSION   DATDAJ010000300 DATDAJ010000000
VERSION     DATDAJ010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4812
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1746298"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(32..1411)
                     /locus_tag="VIS53_07520"
     CDS             complement(32..1411)
                     /locus_tag="VIS53_07520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767670.1"
                     /translation="MRHSLQRVLILAIAVIASAIPLASSAHDVRYWVWQRDDPLDEQE
                     LAELEAQKIDTIYWQAGELENTRETWHWKARFNFPSSNTSHIRFVPVVRLVSREHQPF
                     SDASITALLASLSSASANHDELQLDYDAPDRLLADYAGALKRIHGLVPRLSIAALPHW
                     SRADYLKLLEPNVDVLLPMLYDFEAEPVLKNQSPLPLLSPEKISRLIEAWRRCHKPWR
                     AGLPVFARLSVYDANQKLRGQIRNWNWDELCFNRSFQIANGGQFGTSILHATRSTSIA
                     NTAIHPGDEVIVREVDRSALRAAISSALRAGAQGVVFFRLPDSTASSGWSLRQLGHLE
                     AGPRLILRKPADSEMLELSNISDGDLEPRFASSGVDAGGYTLEIEAPTPIFREAQSGD
                     FASIDAFAGTKRAKVPFATRLRFQFAQLRAKENLRTGLIQLAPGADFTQTRYRILNIE
                     GAPAWRSLE"
     gene            complement(1425..2816)
                     /locus_tag="VIS53_07525"
     CDS             complement(1425..2816)
                     /locus_tag="VIS53_07525"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767671.1"
                     /translation="MKAIMRVCGFLALAVISTCTLLGEETSPSGSVYGPKAGFNISAP
                     EGWVVDNEAGKGQDLPCVLYPKDSSWSDAKTVMYAKVASPQWEGVNAFVATAIKEMKA
                     KHGTPREKIASGKTKDGHDYFINEYPATKTYSQWERVGYVQLPLGVAYIVLTSRDQTS
                     YQKDSGALEKVLKTLFFLEPKSEVARGQEYAHRYRQLLDERAEAQIEPLLSEWREKAP
                     DDPDAWITSANYYFNQRQTNISTKKPGPGDITLTDKKGKLAGSVSFEQTNENMKRAVD
                     LLQEATTKFPDHLDIWCGLAFMYQESGDFDNELSTLKKMVAYAREHPTQLKWLKGAPL
                     TKPADKFVPDKLHEYGSYYEKKENAEDDKRWYQIATLAIDQYPNDPQGFKDAAGYWAD
                     IGEWQKARESFEKAHQLDPKSAASLVALGQISVEMKDFVSARKYYEDALKLEPNGQYA
                     QTAKDALRKLKKK"
     gene            complement(2896..3384)
                     /locus_tag="VIS53_07530"
     CDS             complement(2896..3384)
                     /locus_tag="VIS53_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767672.1"
                     /translation="MIKGTVRASELNSCVYIRACRPWRVISAQTWLAGVLILLSFPNA
                     FAETDFSAFWQKFKSAVIAGDKATVVEMTKFPLSMPYEVKAVKDKEAFLRRYNEIFKG
                     EANAAQCFKSAEPDKESDRRYGIYCPFKETPNDWENAPIRFIFELTKSGWRFVGLDNI
                     NE"
     gene            complement(3421..4179)
                     /locus_tag="VIS53_07535"
     CDS             complement(3421..4179)
                     /locus_tag="VIS53_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767673.1"
                     /translation="MSACSRRIADTLAVVFLLVATSAFAQEQAKPPARSVSPDGQWEL
                     RAGPTGEQEDFVIARAGSDETSLVLSEDEYVDGLAEALGRAPGYANIVWAPDSKRFAF
                     NLQPGKGFQTAQFYQLDGNTWRKLDPPEANTATTAPLDRSMANQKKKVKKKLELSADD
                     WGWPRMTSWQVRRWIDSSTVLLYAHRSAKFELKNDTEEVNVSFFLTLKFDPAGNWKVT
                     RKFEVSEKGVGELNAEERKEINRIENEDRELRSK"
     gene            complement(4217..>4812)
                     /locus_tag="VIS53_07540"
     CDS             complement(4217..>4812)
                     /locus_tag="VIS53_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767674.1"
                     /translation="VGADADFKRAQKLDPRLTSEGTAPDSSSNGGVANGEPTGTTISL
                     LDGKLKLDIPPNFSRDADDPKSPKTLARFSGPDGAWGEVLRGTHGLTPEKLDGYLKMR
                     VAEYSKGFNWLPKDSHLQWLKKDMVTIDGRKWADWRYVPMLKGTKDYSRSPVYTRFLT
                     TSYKGQLLEITFTSNLNTEPKLKEEINHIMESVHLEE"
BASE COUNT          994 a         1352 c         1231 g         1235 t
ORIGIN      
        1 agaaaacaag ccgcggcaac tacggcagtt ttcattccag agatctccac gcgggcgctc
       61 cttcgatgtt cagaattcgg tagcgagtct gcgtgaaatc cgctcctggc gcgagctgaa
      121 tcagcccggt acgcaaattt tcttttgccc gaagctgagc gaactggaaa cgcagccgtg
      181 ttgcaaacgg cactttcgcc cgtttcgtgc ctgcgaaggc atcaatgctc gcgaaatcgc
      241 cggattgcgc ttcgcggaaa atcggcgttg gagcctcgat ttccagcgtg taaccccccg
      301 cgtccacacc gctgctcgca aagcgcggct cgagatcgcc gtcactgata ttcgatagct
      361 cgagcatttc gctgtcagcc ggtttccgca aaatcaatcg tggccccgct tccaaatgtc
      421 cgagttgacg cagggaccag ccgctggacg ccgtcgaatc cggcaaacgg aaaaagacga
      481 cgccctgcgc gccggcgcgc aaggcagagc tgatcgcagc tcgcagcgcg ctgcgatcaa
      541 cctcacgcac gatcacttcg tcgcctggat ggatcgcagt gtttgcaatc gaagtcgatc
      601 ttgtcgcatg caaaattgac gtgccgaatt gcccaccatt cgcgatctga aaactccgat
      661 tgaaacagag ctcgtcccaa ttccagttgc ggatttgtcc gcgcaacttt tggttcgcat
      721 cgtaaacgct taagcgtgcg aaaaccggaa ggcccgcgcg ccagggtttg tgacagcggc
      781 gccaggcttc gatcaaccgc gatatttttt ccggcgatag cagcggcaga ggcgattgat
      841 ttttcagaac cggttccgct tcgaaatcgt agagcatcgg cagcagcaca tcgacattcg
      901 gttccaaaag tttcagatag tccgcgcgac tccaatgcgg taaagccgcg atgctcaaac
      961 gaggaacaag accatgaatg cgcttgagcg cgcccgcata atcggcgagc aaccgatcag
     1021 gcgcgtcata atcgagttgc aactcatcat ggttcgcgct cgccgaagac aaactggcca
     1081 gcagcgccgt aatcgatgcg tcggaaaacg gttggtgctc tcttgaaacc agccgcacca
     1141 caggcacgaa acggatgtga gaggtgttgg aggatgggaa attgaatcgc gctttccaat
     1201 gccaggtctc tctggtgttc tccaattcgc cggcctgcca gtaaatcgta tcgatttttt
     1261 gcgcctccaa ctccgccaac tcctgttcgt cgagcggatc atcgcgttgc caaacccaat
     1321 agcggacatc atgcgcggat gaagccagcg ggatcgcgct ggcgatcacg gcgatcgcta
     1381 gaatgaggac gcgttgcaaa ctgtgacgca ttccacgtcg cttgttactt cttcttcagc
     1441 ttgcgtagtg catcctttgc tgtctgcgcg tattggccgt tcggctccag ttttagagcg
     1501 tcttcgtagt actttcgtgc gcttacaaag tctttcatct ctacgctaat ctgtccgagg
     1561 gcaaccaagg aggcagcgga ttttggatcc agctggtgcg ctttttcgaa cgactcgcgc
     1621 gccttttgcc attcgccaat gtcggcccaa taaccggctg cgtctttgaa gccttgcggg
     1681 tcatttggat attggtcgat tgccagtgtc gcaatttggt accagcgctt atcatcctcc
     1741 gcattctcct ttttctcgta atacgaaccg tattcgtgca gcttgtccgg aacgaatttg
     1801 tcggcaggct tggttagcgg cgcacctttt aaccacttga gctgggtcgg gtgctcgcgg
     1861 gcatacgcga ccatcttctt caacgtcgac aattcgttgt caaaatctcc actttcttga
     1921 tacatgaacg cgagcccgca ccagatatcg aggtggtcgg gaaatttcgt ggtcgcttcc
     1981 tgaagaagat cgaccgctcg cttcatgttt tcgttggttt gctcgaacga cacgctaccc
     2041 gccagctttc ccttcttatc ggtcaacgta atgtcgcctg ggccgggttt cttcgtcgag
     2101 atgttcgtct ggcgttgatt aaaataataa tttgcgcttg tgatccatgc gtcgggatcg
     2161 tcgggcgcct tttcccgcca ttcgctgagc agtggctcga tctgcgcctc cgcgcgctca
     2221 tccagcagct gtctgtaacg atgagcgtat tcctggccac gcgccacctc cgacttcggc
     2281 tcgagaaaga ataaagtttt caaaactttc tcaagcgcgc cggaatcctt ctggtaactg
     2341 gtttgatcgc gggatgtgag gacgatataa gcgactccca gcggaagttg gacgtacccg
     2401 acgcgttccc actgagaata agtcttggtc gcagggtatt cgttaatgaa gtaatcgtgg
     2461 ccgtccttgg ttttaccgga agcaattttc tccctcggcg tgccgtgctt tgccttcatt
     2521 tctttgatcg cggttgccac gaatgcgttt acgccttccc attgcgggct ggcgaccttg
     2581 gcgtacatca ccgtcttcgc gtccgaccac gacgaatctt tcgggtaaag aacgcacggt
     2641 aagtcctgtc ctttacctgc ctcattgtcg acgacccagc cttcgggcgc actgatgtta
     2701 aacccagctt tcggcccgta aacacttcca ctgggtgacg tctcttcacc gagcagcgtg
     2761 caagtcgaga taacagcgag tgcaagaaac ccgcagacgc gcattattgc tttcatgtta
     2821 ttgaatgatg ttacttgtta gtctttcctt ccttaacagg ctgcgaaatt ctcattgcct
     2881 ggcattagtc cacgattatt cattgatgtt gtcgaggccg acaaatctcc agccgctttt
     2941 ggtcaattca aaaatgaagc gaatcggtgc gttctcccag tcgtttggcg tctccttgaa
     3001 agggcaataa atcccataac gccggtcgga ttctttgtcc ggttcggcgc ttttaaaaca
     3061 ttgcgcggca ttggcctccc ctttgaaaat ttcgttgtaa cgacgcaaga aggcctcctt
     3121 gtcctttacg gcttttacct cgtagggcat cgacagcgga aatttcgtca tctccacgac
     3181 cgtcgctttg tcgccggcga taaccgcaga cttaaatttc tgccagaatg ccgaaaagtc
     3241 ggtctccgca aacgcgtttg gaaatgacaa cagaatcaaa accccagcca accaagtctg
     3301 cgcgctgatc acccgccatg gccggcaggc gcgaatatag acgcatgaat tcaattccga
     3361 cgctctcact gttcctttaa tcacggtgtt ctccttttgt taggccaata aatagtcttt
     3421 tcatttactt ctcaattccc ggtcctcatt ctcgatccta ttaatttctt tgcgctcctc
     3481 cgcgttcaat tcgccgactc ctttctcaga cacttcgaac ttccttgtga ctttccagtt
     3541 gccggcggga tcgaacttga gggtgaggaa aaaagatacg ttcacctctt cggtatcatt
     3601 tttgagttcg aactttgcgc tccggtgcgc atatagcagc acggtgcttg agtcgatcca
     3661 tctgcgaacc tgccagcttg tcatacgcgg ccagccccaa tcgtctgccg acagttccag
     3721 ttttttcttc acctttttct tctgatttgc catcgaacga tcgagcggcg cagtcgtggc
     3781 ggtgtttgct tctggcggat cgagcttgcg ccaggtgttc ccgtcgagtt gataaaattg
     3841 cgccgtttga aagcccttgc ccggctgaag attaaatgca aagcgtttcg agtccggcgc
     3901 ccaaacaatg tttgcgtagc caggcgctcg acccagcgct tctgcgagtc cgtcaacgta
     3961 ttcgtcttcg gagagcacga gggatgtctc gtcgctaccg gctcttgcga taacaaaatc
     4021 ctcctgttca ccggtcgggc cagcgcgaag ttcccactga ccatccggcg aaacagatct
     4081 cgccggcggc tttgcctgct cctgcgcgaa ggcagatgtg gcaacaagca aaaacactac
     4141 agcgagtgtg tcggcaatac gacgactgca cgcgctcata caggcgaagt aacgaacaag
     4201 aacgtttgga tggttttcat tcttcgaggt gcaccgattc catgatatga tttatctctt
     4261 cctttaattt gggctcggtg ttgaggttcg aggtaaaagt gatctctaac agctggcctt
     4321 tataggaagt ggttaggaag cgcgtgtaga cggggctgcg cgagtaatct ttcgttcctt
     4381 ttagcattgg aacgtaacgc cagtccgccc acttgcggcc atcgatcgtc accatgtctt
     4441 tcttcagcca ttgaaggtgc gaatctttcg gtagccagtt gaagcctttg ctgtattcgg
     4501 ctacgcgcat cttgagataa ccgtccagtt tttcgggtgt tagtccgtgt gttccgcgca
     4561 aaacttctcc ccacgcgcca tcgggacctg aaaacctggc gagagttttt ggacttttcg
     4621 gatcgtcagc atcgcgcgaa aaatttggcg gaatgtcgag cttcagcttg ccgtcgagga
     4681 gactgattgt tgttccggtc ggttcgccat tcgcgacgcc gccattgctg ctggaatccg
     4741 gtgccgtccc ttcgctcgtt aacctcgggt ccagcttttg ggcgcgtttg aaatctgcgt
     4801 cagccccaac cg
//
LOCUS       DATDAJ010000301         5001 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1748301, whole genome shotgun sequence.
ACCESSION   DATDAJ010000301 DATDAJ010000000
VERSION     DATDAJ010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1748301"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VIS53_07545"
     CDS             complement(<1..897)
                     /locus_tag="VIS53_07545"
                     /inference="COORDINATES: protein motif:HMM:NF040245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HEY5767675.1"
                     /translation="MSLVTHQEQAAPILSGPSESRDFPDWFRDQQRAAWQQFETLPNP
                     TRKDQPWRFSNVGLLDLAPFRISPPLSEDDRNNVLKYSRGLDEYAGRMIFANDQLIER
                     DVVSEDLKKRGVIFQPLERAMVEHSDLFRKYFMSTEAKLGSAKFAALHKALVSTGTFL
                     FVPRGLEIELPIEIFHWLRHDNMSVFPHLLLVADELAKVTVIEHFRSCSQTTPGFACG
                     VNDLIAGPGAKVTYVCAQEWASNVIALQMNSTVVDHDASAMSLNLHVGAKYSRFESLS
                     RLIGEGGRSDLLAVAVAKHQQEF"
     gene            complement(964..2373)
                     /gene="sufB"
                     /locus_tag="VIS53_07550"
     CDS             complement(964..2373)
                     /gene="sufB"
                     /locus_tag="VIS53_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEY5767676.1"
                     /translation="MKTETTAINIDRGKGDFSYPEAHVRDAGAGLSERTIHYIADVKE
                     DPDWVRDFRLRALKTFWEKPLPTHWASKELEAIDFDKIRYYLSPGTETKRSWEEVPDD
                     IKRTFERLGIPEQERKFLAGVEAQFDSEAVYSNIKKAVGEQGVIFVGSREGLKNYPEI
                     FRPWFSKVIPVGDNKFSALNSAVFSGGSFIYVPPGVKVKHPLQAYFRINAENFGQFER
                     TLIIADEGSEVTYMEGCTAPKFNTPTLHSAVVELVALKGAKIQYITVQNWASNVFNLV
                     TKRGLAQENAEVKWIDCNIGSRLTMKYPGVIMKGRKARGEVLSIALANDGQHQDTGAK
                     MIHAADETTSNIVSKSISIGKGRATYRGLVHVPKHLKNCKNNTECDALLINSTSRTDT
                     YPAITVRGTGNAVQHEASVSQVSSEQIFYMQQRGLSEAQAMSLSVNGFVNDLVRQFPM
                     EYSVELKRLIELEMEGSVG"
     gene            complement(2380..3147)
                     /gene="sufC"
                     /locus_tag="VIS53_07555"
     CDS             complement(2380..3147)
                     /gene="sufC"
                     /locus_tag="VIS53_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEY5767677.1"
                     /translation="MNELRVENLRVAVGDQEIVRGLTLYVPRGEVHALMGPNGSGKST
                     LAKVLAGHPDYRVIAGKVLMDGENLLELDPDERARRGLFLAFQYPSEIPGVTIANFLR
                     AALQARLPEGEELEATDYYARLYEKMELLGMDRSFTSRSVNEGFSGGEKKRTEILQMA
                     VLEPQYAVLDETDSGLDIDALKTVAHGVNSLRGPNLGILLITHYQRLLNYIVPDYVHV
                     MVGGRIVRSGRKELALELEERGYDWAREQAAEPVFTR"
     gene            complement(3270..3343)
                     /locus_tag="VIS53_07560"
     tRNA            complement(3270..3343)
                     /locus_tag="VIS53_07560"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3309..3311),aa:Gln,seq:ttg)
     gene            3557..>5001
                     /locus_tag="VIS53_07565"
     CDS             3557..>5001
                     /locus_tag="VIS53_07565"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767678.1"
                     /translation="MERTTFLKNYRIRLQYDGTPYQPSSAGPATSYEAVDERTGEPVS
                     VTLVPAASIDRAEREGFEERISSARKLQHVNIASVRDFGHEGDDYVYVSERLAGETLA
                     SWVRSHGPMPADAALRVGEQIVSVLSSASFHKIPYPPIRPSDIMLVPGQTAEGTWPLV
                     KVTNFGLPALMPQSEPQLNKSDVPGNPAGDQGAKDQQFSEATNDIRSEIYSLGVTLYF
                     LLTGIALSAEALPHSPKFSGFPKPLRVLLGRLLHRDPDQRPKDLLVVTEMIRESLGKI
                     ERRRTLSDRYGIPLRMSVPQPRAARPRRLVRTAAVVGVLLLLAAAIAPVVFPDSIGKL
                     VRGIQKPKQVGVLVGVPDSSPAASQPPTQITRNTSTSPPAVVSSQPVNPNALPQTPAP
                     ANDATTPNPFHVLPADVQQAQIANAQSHGAGPTDAADSAAAATPDTLASTDASANSSP
                     QANTEPPPAAASRSAAESKKKSVASAAKRAPS"
BASE COUNT         1049 a         1445 c         1368 g         1139 t
ORIGIN      
        1 gaattcctgc tggtgtttcg ctacggcgac agcgagcaga tcgcttcggc cgccttcgcc
       61 aatgagacgg ctcagacttt cgaaccgcga atatttcgca cccacgtgca aattcaggct
      121 catagctgaa gcatcgtgat cgaccaccgt ggagttcatt tgtaatgcga tcacgttact
      181 ggcccattcc tgcgcgcaca cgtatgtcac cttcgctcca ggccctgcga tgagatcgtt
      241 gacgccacag gcgaagccgg gcgtcgtttg gctgcaggac cggaaatgct cgatcaccgt
      301 caccttcgcc aactcatcgg ccacgaggag cagatgcgga aaaaccgaca tgttatcgtg
      361 gcgcagccaa tggaagattt cgatcggcaa ttcgatctcc agtccgcgcg gaacgaacag
      421 gaatgttccc gtcgaaacca gtgccttgtg taatgcggcg aactttgccg agccaagctt
      481 cgcttccgtg gacatgaaat attttcgaaa gagatcgctg tgctccacca tggcgcgctc
      541 gagcggctga aaaattacgc cgcgcttttt caggtcttca gaaacgacgt cgcgctcgat
      601 gagttgatcg ttcgcgaaga tcattcgacc cgcgtactcg tcgagaccac gggaatactt
      661 tagaacattg ttgcggtcgt cttcagatag cggcgggctt attcgaaacg gcgccagatc
      721 gagaagaccg acattcgaga atcgccatgg ttgatctttt cgcgtcgggt tcggcaacgt
      781 ttcgaattgt tgccacgctg cgcgctgttg atcacgaaac caatctggaa aatcgcgcga
      841 ttcgctcggg ccggagagaa tcggtgctgc ttgctcttga tgtgtgacta gcgacatctg
      901 gaacttgtaa cgcagcggcg atctcagacc gccgctgcag aaagaattcg tcaaacgcga
      961 cggttatccg accgagcctt ccatctccag ctcgatcaac cgtttgagct cgacgctgta
     1021 ttccataggg aattggcgta cgagatcgtt gacgaaaccg ttcacgctca agctcatcgc
     1081 ctgcgcctcg ctcaaaccgc gctgttgcat gtagaaaatt tgttccgagc tgacctggct
     1141 gacgctggct tcgtgctgca cggcgttgcc cgtgccgcgc acggtgatcg ccggataagt
     1201 atccgtgcgc gacgtcgagt tgatgagcaa cgcgtcgcac tcggtattgt tcttgcaatt
     1261 ctttagatgc ttcggcacgt gcaccaagcc gcggtaagtg gcgcgacctt tgccgatcga
     1321 gatcgatttg gaaacgatgt tgcttgtcgt ctcgtcagcg gcatgaatca tcttcgcgcc
     1381 ggtgtcctga tgctggccgt cgttggcaag cgcgatggac aacacttcgc cacgcgcctt
     1441 gcgacccttc atgataacac cgggatattt catggtgagg cgagacccga tgttgcaatc
     1501 aatccatttc acctccgcgt tttcctgagc gagcccgcgt tttgtgacga ggttgaaaac
     1561 gtttgaagcc caattctgaa cggtgatgta ctgaatcttc gcgcccttga gcgcgacgag
     1621 ttcgaccaca gcgctgtgca gcgttggcgt attaaatttc ggcgcagtgc agccttccat
     1681 gtacgtaact tccgagccct cgtccgcgat aatgagggtg cgctcgaact ggccaaagtt
     1741 ttccgcgttg atcctgaagt atgcctgcag cggatgcttc actttcactc cgggtgggac
     1801 atagatgaag gagccgccac tgaatacagc tgaattcagc gcgctgaatt tgttgtcgcc
     1861 aaccggaatg actttgctga accacggtcg gaaaatttcc ggataatttt tgaggccttc
     1921 tcgcgagccg acaaagatca caccctgttc cccgacagct ttcttgatgt tggagtagac
     1981 tgcctcgctg tcgaactgag cttcgacgcc tgcgagaaat tttcgttcct gctcgggaat
     2041 gccgagtcgt tcgaaggtgc gtttaatgtc gtccggtact tcttcccagc tgcgcttcgt
     2101 ttcggtgccc ggggagagat aataacggat cttatcaaag tcgatggctt cgagttcctt
     2161 gctcgcccag tgcgtgggga gcggtttctc ccagaatgtc ttcaaagcgc gcagacgaaa
     2221 atcgcgcacc caatccggat cctccttcac atccgcgatg tagtggatcg tgcgctcgct
     2281 caagcccgcg cccgcgtcgc gcacgtgagc ttccgggtaa gagaaatcgc ccttaccgcg
     2341 atcaatgttg atggctgtcg tttcggtttt catttgttgt tacctagtaa atacgggttc
     2401 ggcagcttgc tcgcgtgccc aatcgtaacc tctttcctcg agttctagag cgagttcttt
     2461 tcgcccactc ctcacaattc gccctcctac catcacatgg acgtagtcgg gaacgatgta
     2521 gttcaggagc cgctgatagt gcgtgattaa cagtatgcca aggttcggcc cgcgcaacga
     2581 attgaccccg tgcgctacgg tcttcagcgc gtcgatgtca aggccgctgt cggtctcatc
     2641 gagcacggcg tattgtggct cgagcacggc catttgcaga atctccgtgc gctttttttc
     2701 gccgccggag aagccctcat tgaccgagcg cgaagtaaac gaacgatcca tgccgagcaa
     2761 ttccattttt tcgtagagcc tggcgtaata atcagtggcc tctagctctt cgccttccgg
     2821 cagacgcgct tgcaatgcgg cccgaaggaa attggcaatg gtcacgcccg gaatctcgct
     2881 tggatactgg aaagccagaa acagaccgcg tcgcgctcgt tcatccgggt caagttccag
     2941 aagattctcg ccgtccatca aaacctttcc cgcgattacg cggtaatcgg gatgtccggc
     3001 caaaaccttg gccagcgtgc tttttcccga gccgtttggg cccatcaatg cgtgtacttc
     3061 gcctcgcgga acataaaggg tgaggccgcg cacaatttct tgatcgccga cggcgactcg
     3121 tagattttct actctcaatt cgttcataaa gccggaccca aactatacct cagttcgggg
     3181 catttgcgaa ccgcgtaata ggcttcgcct cccgcggcga ggcgcggttc caccggcgga
     3241 gcgacgtgag cgtcgaagac gcttttacgt ggctaccccg catggattcg aaccatgaat
     3301 aacgcctcca aagggcgctg tgttaccgtt acaccacggg gtaccatgat ctgcggttta
     3361 gattcgcgaa tttcgcctcc ggtgcaattt ccaaagtgta ttcggtgaat ggctaagatt
     3421 tcggcccttc caatcgccga tccttgagat cacgttcttt cgaacgcaaa cgccgagcaa
     3481 ctcggaacag aaatcacggt tgaatgaatg gcggcgcagc gagatcgtag ttgtgccgtg
     3541 gccaacgagg ccggttatgg agcgcacgac attcctcaaa aattaccgca tccgtcttca
     3601 atatgacggc acgccgtacc aaccgtctag cgccggtccc gcaacgagct acgaagccgt
     3661 ggatgagaga accggggagc cagtctctgt gacgctcgtt ccggcagcga gtatcgatcg
     3721 ggcggagcgt gagggatttg aagaacgtat atcgtcggcg cggaagctgc agcatgtcaa
     3781 tatcgccagc gtccgtgatt ttggacacga aggcgacgat tacgtttacg tgtccgagcg
     3841 gcttgcgggt gagacacttg cgtcatgggt acgcagccac ggaccgatgc cggctgacgc
     3901 tgcattacga gtcggcgaac agatcgtgag tgtgttgtcc tcggcgagtt ttcacaaaat
     3961 cccgtatccg cccattcgcc cctcggacat catgcttgtg ccagggcaga ccgccgaggg
     4021 aacctggccg ttagtgaaag tcaccaactt tggcttgccg gcgctcatgc ctcagagcga
     4081 acctcagcta aacaaatcag atgtgcctgg caaccccgcc ggcgaccaag gcgcgaagga
     4141 tcaacaattc agcgaggcga caaatgatat ccgctcggaa atctattcgc tgggtgtgac
     4201 cctctatttt ctgctgaccg ggattgcgct ctcggccgag gcgctcccgc acagtccgaa
     4261 gttttcaggg tttccaaaac cgttgcgagt cttgttaggc cggttgttgc atcgcgatcc
     4321 cgatcagcgt ccaaaggatt tactggtcgt cacggaaatg attcgtgagt cgcttgggaa
     4381 aattgagcgc cgacgcacgc tatccgatcg ttacggtatc cctcttagga tgagcgttcc
     4441 gcagccgaga gcagcgcgtc cgcggcggct ggtgcgaact gcggcggtgg ttggtgtcct
     4501 gttgttgctg gcagcggcaa ttgcgcccgt ggtcttcccg gactcaatcg gcaagttggt
     4561 tcgcggcatc caaaagccaa agcaagttgg cgttctggtt ggtgtgcccg actcttcacc
     4621 agcggcaagt cagccaccga ctcaaatcac tcgaaacact tcgacatcgc ctcctgccgt
     4681 tgtgtcatcg caaccggtga acccaaatgc cctgcctcaa actcccgctc cggcaaatga
     4741 cgctacgact ccgaatccgt ttcatgtttt gcctgccgat gttcagcagg ctcaaatagc
     4801 gaacgctcaa tcgcacggcg ccggtccgac agatgcagcg gacagtgctg cggcagcgac
     4861 gcccgacacc cttgcttcta cggacgcatc cgcgaactca tcaccgcagg caaacaccga
     4921 gccgccgcca gctgccgcaa gccggtccgc agctgaaagc aaaaagaaat ctgttgcctc
     4981 cgcagccaaa cgcgcaccct c
//
LOCUS       DATDAJ010000302         5106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1754139, whole genome shotgun sequence.
ACCESSION   DATDAJ010000302 DATDAJ010000000
VERSION     DATDAJ010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5106
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754139"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2365
                     /locus_tag="VIS53_07570"
     CDS             <1..2365
                     /locus_tag="VIS53_07570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEY5767679.1"
                     /translation="SSCKMSTIDSANPPQEYPDIVGARPTNPLAANFKSFIPASANLP
                     ELTWPHLITGTILGIIFGASSLYLVLKVGLTVSASIPVAVISITIFRVASKFFHSSDA
                     TILQNNIVQTAGSAGESIAFGLGVTMPAIMILGVDLEITRVILVAVLGGLLGILMMIP
                     LRRALIVAEHGVLKYPEGTACAEVLKAAVSKESLAVADKTHTTVNAEIVNQEAASGGG
                     KVIFTGFGIGLLYQAAMGAFRMWKDTPEKVFGEPLKGGSISATIEPALLGVGYIIGPR
                     IASIMCAGGVLSYLVLIPAIKFFGDNVVGPVAPGTIPIGQMGPDDIREAYILYIGAGA
                     VAAGGIISLFRSIPTIWHGLRGGLSDLVGQHSSRGHVPRTDRDLSMRVVIIGCLAIIA
                     VIMAVPQLHLRGNFLGAFLIVLFSFMFVTVSSRLTGEIGSSSTPISGMTVATLLLTCL
                     AFLIVGWTAAPYFVTALSIGGIVCIAASNGGTTSQDLKTGFLVGSTPRSQQIAILFGS
                     LASALTLGYVLLFLNDAYTVYVPVPANTELRAPANEIGKPGKVQGLQAASDPKTYHVW
                     QRIDPGGGAAQRYLVNEQGVPVYLVDPGINGTHRARPDGSAVQKFDAPKATLMSYIIK
                     GILSHKLPWALVLLGAMIAVVLEMSGIPSLAFAVGVYLPIASSTPIFIGGMVRWLVDR
                     YLKVKFRHKNLSEMELTAEGDKSPGVLLASGYIAGGAITGIVIAAKEMVGPLAAIGHR
                     IEQWQTAHNPFLSGPYADLLALIPFFIICLLLYLVGRDLLLVARSKS"
     gene            complement(2476..3864)
                     /locus_tag="VIS53_07575"
     CDS             complement(2476..3864)
                     /locus_tag="VIS53_07575"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5767680.1"
                     /translation="MNPLIQFKTITSPLLITFTLVGFALLPRVQAVVPPPDGGYPGFN
                     TAEGTNALFNLTTGSANTAVGWFSLFSNTDGSFNTAAGAGALLFNTANQNTAFGTAAL
                     LFNTTGQANTGVGSAALLNNTTGDGNTATGARALTSNTIGSQNTANGTGALQLNTEGD
                     NNTANGTSALILNTTGGQNTAVGSGALFGNNSSDNTAVGFQSLFSNTTGIQNTATGAQ
                     ALASNTSGQSNTATGYLALLNNQYGNFNNAVGRFALASNTTGMDNTAIGDFAGFNQTT
                     GGGNVYIGSGVTGLAGEGGACYIRSIFGQVSAGGTQVFVNSNHKLGTTTSSKRFKENI
                     KPMDKASEALFSLKPVSFRYKKEIDPASRSQFGLVAEDVERVHPDLVIRDKEGKPYSV
                     RYDQVNAMLLNEFLKEHRRNEEQEAIIARLVATDTRQQKQIEALTAALQKVSSAQLEL
                     SKSAPLTVLNDQ"
     gene            complement(4076..>5106)
                     /locus_tag="VIS53_07580"
     CDS             complement(4076..>5106)
                     /locus_tag="VIS53_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HEY5767681.1"
                     /translation="ATQLRKLIDDLRELSDIEPIITIDQEGGRVSRLRRIGNEPPNAQ
                     QLREKNDIDLIRRHGDITGRLLRLFGFNLDLCPVLDISFNDDAENSLHGRCYGKTVEQ
                     VMRNAGAFNEAMREQGIASCGKHFPGYSAATSDAHYQLPRIDRTREELDEHELAVFRA
                     FMGRGRSPNRLGAIEVNRPYLKEGIVDSMMICHGWYPCFESQPTPATVSRRIVTELLR
                     NEFGFEGLVMTDDLDMGAILTAYRLDDTIRLCLEAGNDIVMLCHRVPEIETVQRILGT
                     LPSDQIERAQQHISEFKKNLSPPQPFSESAFQEINAEIADLRIAVVGEKESSRLVRER
                     QISPVERF"
BASE COUNT         1060 a         1365 c         1429 g         1252 t
ORIGIN      
        1 aagctcttgc aaaatgtcga cgatcgatag cgcaaatccg ccgcaggaat atcctgacat
       61 cgtcggcgcg cggccaacga atccactagc ggcgaacttc aaatcgttca ttccagcctc
      121 cgcgaatttg ccggagctga cctggccgca tctgatcact ggcacgattc tcggaattat
      181 tttcggcgcg tcgtcgcttt accttgtgct caaagtggga ttgacggtga gcgcgtcgat
      241 cccggtggcc gtgatttcaa tcaccatctt tcgcgttgcg tcgaagtttt ttcactcgag
      301 cgacgcgaca atcctgcaaa acaacatcgt tcaaacggca ggctcggccg gcgagtcgat
      361 cgcgttcggc ctgggtgtga cgatgccggc gatcatgatt ctcggagtcg atctcgaaat
      421 cacgcgagtg attctcgttg cggttctcgg gggattactc ggcatactga tgatgatccc
      481 gctgcgacgc gcattgatcg tcgcggagca cggtgttttg aaatatcccg aaggtacggc
      541 ttgtgccgag gttctgaagg cagccgtctc gaaggaatcc ctcgccgtcg cggacaagac
      601 gcacacgacc gtgaatgcag aaatcgtaaa tcaagaagcg gcgagcggcg ggggaaaagt
      661 catcttcact ggtttcggaa tcggtcttct ttaccaggcc gcaatgggcg cgttcagaat
      721 gtggaaggac acgccggaga aagtgtttgg tgagccatta aaaggcggct ctatctccgc
      781 cacgatcgaa ccagctttgc tcggtgtcgg ctatatcatc gggccacgga tcgcctcgat
      841 catgtgcgca ggcggcgtgc tctcgtatct cgttctgatt ccagcgatca agtttttcgg
      901 ggacaacgtc gtgggaccgg ttgcaccggg aaccattcct atcggccaaa tgggacccga
      961 cgatattcgc gaggcgtata ttctttacat cggcgcgggg gcagttgctg ccggtggaat
     1021 catcagcttg ttccgctcga ttcctacaat ctggcatgga ttgcgaggcg gattgtcgga
     1081 cttggtaggc caacacagtt cgcgcggaca cgtgcctcgg acggatcgcg atttatcgat
     1141 gcgcgtcgtg atcattggtt gccttgcgat catcgcggtc atcatggcgg ttccgcagtt
     1201 gcatctgcgt ggaaattttc tcggcgcatt tctgatcgtg ctgttcagct tcatgttcgt
     1261 caccgtgtct tcgcgattaa ccggagagat tgggtcttct tcaactccga tttccggaat
     1321 gaccgtggcg accttgctgc tcacttgcct ggcgttcctg atcgtaggct ggaccgccgc
     1381 gccctatttc gtcacagcgc tctcgattgg aggaattgtt tgcatcgccg catctaacgg
     1441 cggcacaact tcgcaggatc taaaaacagg ttttctggtc ggatcgacgc cgcggtcgca
     1501 gcagatcgca atcctgttcg gttcgctggc atcggcgctg acacttggat acgtgctttt
     1561 gtttttgaat gacgcgtaca ccgtttacgt gcccgttccc gcaaacactg aattgcgcgc
     1621 ccctgcgaat gagatcggaa aaccgggaaa ggtccaagga ttacaggccg cttcggatcc
     1681 gaaaacgtat catgtctggc aacgcatcga tccaggtggc ggcgctgctc agcgttattt
     1741 ggtgaacgag cagggcgttc ctgtttatct cgtggatccc ggcatcaacg gcacacacag
     1801 ggctcgtcct gatggttcag cagtgcagaa gttcgatgcg ccgaaagcaa ctttgatgtc
     1861 gtacatcatc aaaggcatcc tcagtcacaa gttgccgtgg gcgcttgttc tgctgggcgc
     1921 gatgattgcg gtcgtgcttg agatgagtgg gattccatcg ctggcattcg ctgtcggagt
     1981 ttaccttccc atcgcctcct ccaccccaat cttcattggc ggaatggttc gctggctggt
     2041 ggatcgctac ctgaaagtga aattccgaca caaaaaccta tccgagatgg aactcaccgc
     2101 ggagggtgac aagagtcctg gcgtcttgct cgcttcgggt tacatcgccg ggggcgcaat
     2161 caccgggatc gtgatcgctg ccaaagaaat ggtgggccca ctagccgcaa tcgggcatcg
     2221 gatcgagcaa tggcaaacag ctcacaatcc atttctaagc ggcccgtacg cggacctact
     2281 cgccttgatt ccgtttttta taatctgtct tcttctgtat ctcgtgggac gcgatctttt
     2341 gctggtagcg cgctccaaga gctgaataga aaatcggctc agccaatcgg gaacaaacct
     2401 gcgccagcga aagtctccca attcccttgt cagcaagtgc aattgcaaga atggccggtt
     2461 cgtaactcag cagctttact gatcgttcaa aacggttagc ggtgcggatt tgctcagttc
     2521 aagctgtgcg ctgctcactt tttggagtgc ggcggtgaga gcttcgatct gcttctgctg
     2581 gcgcgtatca gtcgctacaa gccgggcgat gatcgcctcc tgttcctcgt ttctgcgatg
     2641 ctccttgagg aactcgttta gcaacatcgc gttcacctgg tcgtaacgca cactgtaggg
     2701 ttttccttct ttgtcgcgta taaccaagtc tgggtgcacc ctttccacat cctcagccac
     2761 aaggccgaac tgcgatctgc tcgcgggatc aatctctttc ttgtaacgaa agctcactgg
     2821 cttaagtgaa aagagcgctt cgctggcttt atccatcggc ttgatgtttt ccttaaagcg
     2881 cttcgaagaa gtggtcgtac cgagcttgtg gtttgaatta acgaaaacct gagtcccacc
     2941 agctgagact tggccaaaga tgcttctaat gtaacaggcg ccgccctcgc cggccaggcc
     3001 tgtcacccct gagccaatat agacgttgcc gccaccggtg gtttgattga aaccggcgaa
     3061 gtcaccgata gccgtattgt ccatgccagt agtattactc gcgagggcaa agcgcccgac
     3121 ggcattgttg aagttcccgt actgattgtt caaaagcgcc agatagccag tggccgtatt
     3181 ggattgaccg ctcgtgttac tagcgagcgc ctgagcaccg gtggccgtat tttggatgcc
     3241 ggtggtgtta ctaaagagcg attgaaaacc gacggccgta ttgtcggagg agttgttgcc
     3301 gaacagcgca ccagatccta cggccgtgtt ctgaccgccg gtggtgttca ggatgagcgc
     3361 cgaggtgcca ttagccgtgt tgttgtctcc ttcggtattc aattgaagcg caccggtacc
     3421 atttgccgtg ttttggctgc cgatcgtgtt gctagttagt gcgcgagcgc cggtcgccgt
     3481 gttgccgtct ccggtcgtgt tgttaagaag ggcagcagaa ccgacgcctg tgtttgcttg
     3541 gccggtggtg ttgaataaga gcgccgcagt accaaaggcc gtattttggt ttgcggtgtt
     3601 gaagagaagc gcccccgcac cggcagccgt gttgaagctg ccatcggtgt tgctaaaaag
     3661 agaaaaccaa ccaactgctg tgttcgcaga gccggtggtc aggttaaaaa gggcattggt
     3721 cccttctgct gtgttgaacc cgggatagcc gccgtctggc ggcgggacaa ccgcctgcac
     3781 ccttggtaaa agcgcgaatc cgacgagtgt gaatgtaatg agaagtggtg aagttatcgt
     3841 tttgaactga atcaatggat tcatggctct tcctttcttt tcctttcccc gctgatttag
     3901 agtttaggag tgcgggtccg gaaggagacg aagaacctag cgggaaaaaa atgtcctccg
     3961 cctgattcag atccgtttag cgacaccgag tttgaaaaaa tctgcgaagc gtgtcaaacc
     4021 tctaatcatt gcacgcgaca ccgtttggcc ggaattcgcg taattcgcgg gccaatcaga
     4081 atctctccac tggcgaaatt tgacgctcgc gtacgagccg gctggattcc ttttcgccga
     4141 ccacggcaat gcggagatcc gcaatttctg cgttgatctc ctgaaacgcg ctctcggaga
     4201 atggctgagg tggcgagagg tttttcttaa attcacttat gtgttgctgc gcgcgttcga
     4261 tttgatcgga aggcaacgtg ccaaggattc gctgcaccgt ttcaatttca gggacgcgat
     4321 gacaaagcat cacaatgtca tttcctgcct cgaggcatag gcgaatggta tcgtccaatc
     4381 gataagcggt caggatcgca cccatgtcca gatcgtcagt catgaccagg ccttcgaaac
     4441 caaattcgtt gcgcaacaac tctgtaacaa ttcggcgcga aacggtggcc ggcgtaggtt
     4501 gcgactcgaa acacgggtac cacccgtggc agatcatcat gctgtctaca atgccctctt
     4561 tgaggtaggg gcgattgacc tcaatcgccc cgaggcggtt cggtgaacgg cccctaccca
     4621 taaacgcgcg aaatacagct agctcatgct cgtccagttc ttcccgggtg cgatcgatgc
     4681 gcggcaattg ataatgcgca tctgaagttg cagctgagta accgggaaaa tgtttgccgc
     4741 agctggcgat cccctgctca cgcatcgcct cgttgaatgc gccagcattg cgcataacct
     4801 gttcgacagt ttttccgtaa caccgaccgt gcaacgagtt ttcggcgtca tcattgaacg
     4861 aaatgtcgag caccggacaa agatcgagat tgaatccgaa aagccgcagt aaacgtccgg
     4921 tgatatcgcc gtggcgtcgg atcaaatcga tatcgttctt ttcgcgcaat tgttgcgcgt
     4981 tcggcggttc gtttccgata cgccgcagtc gcgagacgcg tccgccttcc tgatcgattg
     5041 tgatgatcgg ctcgatgtcg ctcagttcgc gcaaatcgtc gatgagcttt cggagttgcg
     5101 tcgcgc
//
LOCUS       DATDAJ010000303         4711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1757143, whole genome shotgun sequence.
ACCESSION   DATDAJ010000303 DATDAJ010000000
VERSION     DATDAJ010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4711
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1757143"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1084)
                     /locus_tag="VIS53_07585"
     CDS             complement(<1..1084)
                     /locus_tag="VIS53_07585"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEY5767682.1"
                     /translation="MSKQRLTITDNRTGKSYELPIENGTVRAMDFRQIKTDEDDFGLM
                     TYDPALMNTASTKSAITFIDGDKGILEYRGYPVEQLAKRGNFLEVAYLILFGELPNEE
                     QLAAWTYDITHHTFVHENIKTLMQAFRYDAHPMGMFISTVAALSTFYPDANKVGNADN
                     RLAQIKRLIAKVPTIAAYTYRHNRGLRYIYADNDLSYTGNFLNMMFKMTDAKYMPNPS
                     LERALDVLFILHADHEQNCSTNAMRAIGSSCADPYSAMAGAAAALYGPLHGGANEEVL
                     KMLSRIDHTRNIPEFIQRVKNGEGKLMGFGHRVYKNYDPRARIIKRVADEVFQMTGHN
                     RLLDIALELERIALEDEYFISRKLYPN"
     gene            complement(1137..1667)
                     /locus_tag="VIS53_07590"
     CDS             complement(1137..1667)
                     /locus_tag="VIS53_07590"
                     /inference="COORDINATES: protein motif:HMM:NF016154.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEY5767683.1"
                     /translation="MNTFSELLHTLLGIGTQPRDLTFLQVSIRGVIVFIATLIMMRLG
                     SKRSLAEKTAFDAVFVVIIGSMLARAINGSEAFFPTLGTGFVLVFLHRLFGMAAFYSH
                     AFGILVKGKPVVLVRDGTLQRKNMLWEHISKHDLEEDMRLEAKTEDLSKIQVARLERS
                     GDISFIKANSVKQQAT"
     gene            complement(2360..2854)
                     /locus_tag="VIS53_07595"
     CDS             complement(2360..2854)
                     /locus_tag="VIS53_07595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HEY5767684.1"
                     /translation="MLYTSKGAAKGVINFVMPEEEVIERAREDDREGKSPSTQAGEFV
                     REEMEHIREGEHGARSPEQAIAIGLSKARRAGVKLPPPKRGKERTKRQAKRDLAKGRA
                     GGRKKPSLKRSRATKRALKRESRRSASRRALSRHAKRVAGQRSARSRSAAAKKAARTR
                     KRRR"
     gene            complement(2905..3108)
                     /locus_tag="VIS53_07600"
     CDS             complement(2905..3108)
                     /locus_tag="VIS53_07600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767685.1"
                     /translation="MDTQQNPNEPGKQTGPGQQGGQQDREREERERQRREREKQGGGQ
                     KGGGQQGGGQQGGGQKGGQQGVR"
     gene            complement(3302..3745)
                     /locus_tag="VIS53_07605"
     CDS             complement(3302..3745)
                     /locus_tag="VIS53_07605"
                     /inference="COORDINATES: protein motif:HMM:TIGR02284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2169 family four-helix-bundle protein"
                     /protein_id="HEY5767686.1"
                     /translation="MKKQNEVIDNLIETLKDGQEGFKQAAESVRNSALKTLFSDFSQQ
                     RSRFGTALQSEARRHGETKPETSSSATGALHRGWINLKSAITGGDEHAILAECERGED
                     SALEEYKKALDNGLSPSAQELVSSQFAEIKAAHDRIKGLRDAAKS"
     gene            3885..>4711
                     /locus_tag="VIS53_07610"
     CDS             3885..>4711
                     /locus_tag="VIS53_07610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY5767687.1"
                     /translation="MTNVPVWIDDTPIQKFPKLQRNISVDVLVVGAGVTGITVAYLLK
                     KAGSTVALIERERVASIDTGHTTAHLTYVTDLQLQELVRNFGEDHAQAAWDAGAVAID
                     EIERIIEEERIECEFGRVPAYLHARVDASPKKEASSLKKEADGASRLGFDATYLDSAP
                     YFNLPAVRFANQAKFHPRKYLRALVVKIPGSGSDVFEKSAASEFDPKTRRVKVNRNWI
                     SFDRVVMATNNPLVGLASMTSATLLQTKLSLYTSYAFGAQVPIGAIPECVFWDTRDP"
BASE COUNT         1022 a         1265 c         1241 g         1183 t
ORIGIN      
        1 cgttcgggta aagtttgcgc gagatgaaat attcgtcctc cagcgcgatg cgttcgagct
       61 cgagcgcgat atcgagcaaa cgattgtgcc cggtcatctg gaatacttcg tccgccacgc
      121 gtttaatgat gcgcgcgcgg ggatcataat ttttgtaaac gcgatgcccg aaacccatca
      181 gtttgccttc gccgttttta acgcgttgga tgaattcggg tatgttgcgc gtgtgatcga
      241 tgcgcgagag catcttgagc acttcttcgt tcgcaccgcc atgcagcggc ccatagagcg
      301 cggctgcagc tccagccatc gcactgtagg gatcagcgca gcttgaaccg atcgcgcgca
      361 ttgcattggt gctgcagttc tgttcgtggt ccgcgtgcag aatgaaaagc acgtcgagcg
      421 cgcgttcgag cgacgggttc ggcatgtact tggcatcggt catcttgaac atcatgttca
      481 agaagttgcc ggtatagctc aggtcgttat cggcgtagat gtaacgcaag ccacgattgt
      541 gacgataagt gtatgcggcg atcgtcggta ccttggcgat gagtcgtttg atttgcgcca
      601 gccgattgtc ggcgttaccg accttgttag cgtctggata aaaggttgaa agcgcagcga
      661 cagtgctgat gaacattccc atgggatgcg cgtcgtagcg gaacgcctgc atcagcgtct
      721 tgatattttc gtggacgaag gtgtgatgcg tgatgtcgta ggtccacgcc gccaactgtt
      781 cctcgttagg caactcgcca aaaagaatca ggtatgccac ttccaaaaag ttgcctctct
      841 ttgcgagttg ctcgaccggg tagccgcggt attcgagaat gcccttgtcg ccgtcaataa
      901 acgtgatcgc gctcttggtg gacgctgtgt tcatcaacgc agggtcgtag gtcatcagcc
      961 cgaaatcgtc ttcgtccgtt ttgatctgtc ggaaatccat cgcgcgcaca gtcccattct
     1021 cgataggcaa ctcgtacgat ttgcccgtcc gattgtcggt aatcgttaag cgttgtttag
     1081 acatttcgtt ttgctctcaa attaacaccg ttgagcaaac gatgtcacgg tttcaatcac
     1141 gtcgcctgtt gcttgacgct attcgctttg ataaagctga tgtctccgct gcgttcgagt
     1201 cgcgcaacct gtatttttga caggtcctcc gttttcgctt cgagccgcat atcttcttcc
     1261 agatcgtgtt tggaaatgtg ttcccagagc atgtttttcc gctgcaacgt gccgtcccgc
     1321 acgagcacca ctggttttcc tttaaccagg atcccaaaag catgtgaata gaacgcggcc
     1381 atgccgaaaa gccgatgcaa gaagaccaga acgaatccag tgcccaaggt tggaaaaaag
     1441 gcttctgatc cgttaatggc ccgtgccagc atggagccga tgataaccac gaaaacagca
     1501 tcgaacgcgg ttttctctgc aagcgaacgt ttactgccca gtctcatcat tatcagagtc
     1561 gcgatgaaaa caattacccc gcggattgaa acttgcagga atgttaagtc tcttggttga
     1621 gtgccgattc caagcaacgt gtgaagcaat tctgagaacg tattcatgtc tgaagattcc
     1681 cattaccgaa caagacttcc aagcgcgcat gttaatcttg cgaagcaatc aaatccgatt
     1741 ggtcaccgaa atgcgtttcg ttttatcgaa tagttcacgt ggaggactta tggcacgagg
     1801 aagcaaaaag aaatacacgt ctaagcaaaa gcgcaaagcc catgacattg agaagggtta
     1861 taaaaagcgc ggcgtaagca gcaaagaagc ggaacgccgc gcatggcgac agtaaataac
     1921 tcagataagg gtggccggaa aaaagacgga ggaggtcgcg gcaaaaagcg aaagcaaatc
     1981 aagttcccgc aaaggcgaga gaaaaggcgg ccggaaataa gtcgctgata atcgcaaaag
     2041 acattgcatt agcagcgatg aacgattgac ccgaccttta ccttgagcgg tttagtttct
     2101 ttcgcgcagc cttggctcct tcttttccga gagctgtacg cgtccttttc gacaaatgcg
     2161 caatcgttct ttttcgccgt gcagctttgg ccgctttctt aatgttccgc ttcgcagcgg
     2221 cgcgttgttt tctggttctc atatcctcca gcgaaacagg tcagtcgaac aaaggcttac
     2281 ggatagctgg tgttgcggcg gctgaagctt cttctctttg ggcatgcgac ctctctccgc
     2341 cgcaagttat gccagaatct cagcgccggc gcttccgcgt gcgcgcagct ttcttcgcgg
     2401 cggcggaacg cgagcgtgcc gagcgttgcc cggccacccg cttcgcgtgt ctggacaatg
     2461 cccgccttga cgcagagcga cggctctcgc gcttgagcgc tcgtttcgtc gcgcgagagc
     2521 gtttcagaga tggctttttg cggccaccgg cgcggccctt tgcgagatcg cgctttgcct
     2581 ggcgctttgt tcgttccttg ccgcgttttg gaggcggcaa ctttaccccg gcccgccgcg
     2641 ccttggacag accaatggcg atcgcttgct ctggcgatcg ggcgccgtgt tcgccttcgc
     2701 ggatgtgttc catttcttcg cgcacaaatt cgcccgcctg agtggaaggc gacttgcctt
     2761 cgcgatcatc ttcacgcgcg cgttcaatta cttcttcttc tggcataaca aaattgatta
     2821 cgcctttagc cgcgcctttg gacgtatata acaaagcggc gagagttacc tccagccgct
     2881 ttggtgtttc aaaagaacca agtcttatcg tacgccctgt tgaccgccct tttggccgcc
     2941 accctgttga ccaccccctt gctgaccgcc gcccttttgg ccgccacctt gtttttcacg
     3001 ctcacgccgc tgacgttcac gttcctctct ctcgcgatct tgttgtccgc cttgctgtcc
     3061 ggggccggtc tgtttgcccg gttcgtttgg attttgttgt gtgtccatgg tgcctttctt
     3121 ttatcgaatt agtttcttgg gtcgttcgca cttcgcgaat cgaccttttt caatcaaatc
     3181 ggcacgcaca acgatttggg ctgaaacccg caatcgggag gacggatgat tgccctatca
     3241 ggcaaaaccc tattggacat gccatcacgt catctttttg agaccgcttt gtttttgtaa
     3301 gttagctttt ggcagcatcg cgcagacctt tgatccggtc atgggccgct ttaatctcgg
     3361 cgaattgact ggaaacaagc tcctgagccg atggagataa accgttgtcc agggccttct
     3421 tgtattcttc gagcgctgaa tcttcacctc gttcgcattc cgcgaggatc gcatgttcat
     3481 cgccgcctgt gatcgccgat ttcaagttga tccagccgcg atgcaatgcg ccggtcgcac
     3541 tgctgctggt ttccggcttg gtttctccat ggcggcgagc ctcgctttgc agcgcggtgc
     3601 cgaagcgcga acgctgctgc gagaaatcgc taaagagtgt cttcaatgct gaatttcgaa
     3661 cgctttcggc tgcctgctta aaaccttcct gaccatcttt taaggtttca atcaggttat
     3721 cgattacttc gttttgcttc ttcataaaaa gatagtcgca tttcacgctg ctttcgcgtg
     3781 cctccagatg ttcagcagcg aaaggaaatc ctgaccgcta cgcctactga atgaaacagc
     3841 gcacgcgcac ggctaaaatg cacacgcgca gcgaacaatg aaagatgaca aatgttcctg
     3901 tttggatcga cgacacacca attcaaaagt tcccgaagct acaaaggaac ataagcgtcg
     3961 acgttcttgt ggtcggagcc ggcgtcactg gtatcacggt tgcctacctc ctgaagaagg
     4021 cgggatcaac agtcgcacta atcgagcggg aacgggtggc ctcaatcgat acgggccaca
     4081 ccactgccca tctcacctat gtcacagacc tccagctcca agagttggta cgcaattttg
     4141 gcgaagatca tgcgcaagcg gcctgggatg caggcgccgt cgcgatcgat gaaattgaga
     4201 ggatcatcga agaagagcgg atcgagtgcg agttcgggcg cgtgccggcg tatctgcacg
     4261 cgcgggtaga cgcttctccg aaaaaagagg cttcatcact caagaaagag gctgatggcg
     4321 catcgaggct tggatttgac gccacttact tagactcagc cccgtacttt aatttaccgg
     4381 cggtgcgatt tgcaaatcag gccaagtttc accccaggaa atatcttcga gctttggttg
     4441 tgaaaattcc tggcagcggt tcggacgttt tcgaaaaaag cgcagccagt gaattcgatc
     4501 cgaagacgcg cagggtgaaa gtcaaccgca actggatcag tttcgatcgc gtggtgatgg
     4561 caacgaataa cccccttgtc ggccttgcga gtatgacgtc cgcgacgctt ttgcagacta
     4621 aactctctct ctatacgagc tacgcgttcg gcgcccaagt cccaatcggg gcaattccgg
     4681 aatgcgtctt ttgggatacc cgagatcctt a
//
LOCUS       DATDAJ010000304         4788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1759285, whole genome shotgun sequence.
ACCESSION   DATDAJ010000304 DATDAJ010000000
VERSION     DATDAJ010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4788
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1759285"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..918
                     /locus_tag="VIS53_07615"
     CDS             <1..918
                     /locus_tag="VIS53_07615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767688.1"
                     /translation="ILGRARHCVRAVVAFALLAFPASVFCDNRHIAFEREQAVWIANL
                     DGTGEKKIADGIFPAISPDGTRVAFNTTEKTSDTTYARHIAVIDVATGKIDVFKDVPS
                     DNSYYPSWTADGKQILFTTRPHEVWNLAVVNPDGTNFHVLKPGVQNEVTRYSPIWARD
                     AQSVFCEDMANIYQLGLDGSVRAQWKINKIVPKGDMSGDGRIDVSPDGKRLLLSIDMG
                     EESGRKDWDGPLPALWAFDMQSQKATRLTPKKLFGWDGVWLDNDTILFLSRAAGEKED
                     SIYRMSTDGKNLKRLIKNARFPSVSAPNA"
     gene            complement(1267..4671)
                     /locus_tag="VIS53_07620"
     CDS             complement(1267..4671)
                     /locus_tag="VIS53_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HEY5767689.1"
                     /translation="MTSAEIRQSFLDFFREKKHTIVPSSPLLPDAPNLLFTNAGMNQF
                     VPIFLGQQRPPWKPPRVADTQKCIRAGGKHNDLEDVGLDTYHHTFFEMLGNWSFGDYF
                     KKEAIEWPWELLVERWKFPAQRLYATVYKPGPGEPSEFDQEAYDHWARLFREADLDPK
                     VHVLSSGKADNFWMMGDTGPCGPCSEVHVDLTPDGDTRGALVNKNDPRCIEIWNLVFI
                     QFNAQPVAGGGDPGRMDFVPLPQRHVDTGMGFERAVAIIQGTRNLTDFSGTTSNYETD
                     VFRPIFDEIEKLSGKKYASTLPTHGSGGEGEQEKIDIAFRVIADHVRALSFAIADGII
                     PSNEGRGYVLRRILRRAVRYGRTLGFHEPFFFKLIDVVAKTMGDVFPEVRTQQSKIKE
                     TIRREEEAFNKTLDRGIELFEREVARILGSAGASPAVSRASRDTPTKAPGATHYKRRL
                     PQFERPWAKYMVTFTTLRHRKLSPAEQDITLQTILHDASKKYELYAACVMPDHVHLLL
                     EPQIENEDAKGAPVFFTLSDILQTLKSVSSHRINKLGGVKGQRVWENESFDRVIRSEH
                     DLEEKFHYICRNPWDSGVAKSADDYLWLWTPQPARVSREARDTAGEAPALPGTSVISG
                     EFAFKLYDTYGFPLDLTELMARERGLTVDVAGFERLMDEQRERARKAQKKEEISVEEG
                     ELGVEPTKFLGYDFLETEAVVETVLPGKKKSEVNVVLDRTPFYAEMGGQVGDRGLLHV
                     PGHDWTELGQLRVTDTQKRGDVFVHRAAVVEGRAPEPGEAVRVSVDADRRRAIQGHHT
                     VTHLLHWALHEVVSRDASQKGSYVGPDKLTFDFSSAPLTPDQKRDVEKLVNEKIAENA
                     SVSWTEIPFAEAKQRKDIIQFFGEKYGDTVRVLQIGGTPRALNGYSMELCGGTHVRAT
                     GEIGPFRILKEEAIAAGTRRIEAVAGDAAREWANQEAARQQEKFDALTRKKPDISALP
                     PFQGNAATAEMLKQIDARATHLEKLDAEVREWEKRTAKSADAELKSRAAQIAGELARS
                     HAGKNFCVAEVPDADGKLLQAIVDALKSKFEGPIFLAGTRDASVALVAYVPAAMTPKI
                     EANKLIQQIAPIVGGKGGGRPESAQGAGKDASKINEALAKAREVLS"
BASE COUNT         1018 a         1368 c         1294 g         1108 t
ORIGIN      
        1 atcctcggta gggcgcgtca ctgcgtgcgc gccgtcgtcg ctttcgcctt gttagcgttt
       61 cccgcgtcgg ttttctgcga taatcggcac atcgcctttg aacgggagca ggctgtctgg
      121 atagccaatc ttgacggcac gggtgagaaa aagatcgcgg acggcatttt ccctgccatc
      181 tcgccggatg gaactcgcgt cgcgtttaac acaacggaga agaccagcga cacgacatac
      241 gcgcgtcata tcgccgtcat cgatgttgcc acgggaaaaa tcgacgtttt caaagacgtg
      301 ccgagcgaca attcctatta cccgagctgg acggctgacg ggaaacaaat ccttttcact
      361 acgcgtcctc acgaagtttg gaatcttgcc gtggtgaatc ccgacggcac caatttccac
      421 gtgctcaagc ccggcgtgca aaatgaagtg acgcgatact cgccgatttg ggcgcgcgac
      481 gcccaatcgg ttttttgcga ggacatggcg aacatttacc aactcggcct agacggctcg
      541 gtgcgcgcgc aatggaagat caacaagatc gtgcccaaag gcgacatgag cggcgacggt
      601 cgcatcgatg tgtcgcctga tggcaagcga ctgcttctga gcatcgatat gggcgaagaa
      661 tcggggcgca aagactggga cgggccgttg ccggcgcttt gggcgtttga tatgcaatcg
      721 caaaaggcga ccaggctcac accgaaaaaa ttattcggct gggacggcgt ctggctcgac
      781 aacgacacca ttctttttct cagtcgtgcc gccggcgaaa aggaagattc gatttatcga
      841 atgtccaccg acggtaaaaa tctgaaacgc ctgatcaaga acgcgcgctt tccaagcgtg
      901 agcgcgccga atgcatgaaa caatgcaaag atgattatgt ttgggaactg ttatggctga
      961 ccgctaacga attcctttgc atcctgtaaa aggagaagga aaaccagccg tcgatttatc
     1021 ggatgtctct ggacggcaaa aatccgaagc tgctcgtgaa acacgcgcga atgcctagcg
     1081 cgagctcacc gtaaagatta cgtcaatacg gcactgtcat gttgagcgga gcgctgcaac
     1141 gaaatgcgaa gcatgaggcc aggctttcaa acatctctgg cctattcctt gcgaggatca
     1201 gtccaaaaat taagccgaga ttcttcgctt cgctcagaat gacaaccgtt cttacaggct
     1261 ctcgccttag ctcagaactt ctcgagcttt tgccaacgcc tcgttgatct tgctggcgtc
     1321 tttcccggcg ccctgcgcgc tttctggacg tccgccgcct ttcccgccta caataggcgc
     1381 gatctgttgg atcaatttgt tcgcctcaat cttcggcgtc atcgctgcag ggacataagc
     1441 aaccaaagcg actgatgcgt ctcgcgtgcc cgcaagaaaa atcggacctt cgaatttgga
     1501 cttcaatgca tccacgattg cctggagcag ttttccatcc gcatctggta cttcagcgac
     1561 gcagaaattc ttcccagcat gcgatcgcgc cagttcgccg gcgatttgag cagccctgct
     1621 cttcagttct gcgtcagcag atttcgccgt tctcttttcc cattcacgaa cctcggcatc
     1681 taatttttcg agatgcgtcg cgcgggcgtc gatttgtttc agcatttctg ccgtcgccgc
     1741 attaccttgg aaaggcggca gcgcagagat gtctggtttc ttgcgcgtaa gcgcgtcaaa
     1801 cttctcctgc tgtcgcgcgg cttcttgatt cgcccactca cgcgctgcgt cgccagcgac
     1861 tgcttcgatg cgccgcgttc ccgctgcgat ggcttcttcc ttcagaatcc ggaacggccc
     1921 gatctcgcct gtggctctca catgtgttcc gccgcacagc tccatggagt aaccgttgag
     1981 cgcgcgaggc gtcccgccga tctggagcac gcgaaccgtg tcgccgtatt tctcgccgaa
     2041 aaactgaatg atatcttttc gttgttttgc ttcggcgaat ggaatttcag tccacgaaac
     2101 cgacgcgttc tcggcaattt tttcgttcac caatttttca acgtcgcgct tttggtctgg
     2161 cgtgagaggc gcgctggaaa agtcgaaggt caatttatcg ggcccgacat aactgccttt
     2221 ttgcgaagca tcgcgtgaga ccacttcgtg aagcgcccaa tgcaacaaat gcgtgacggt
     2281 gtgatgcccc tggattgcgc gacgtcgatc ggcgtcgact gagacgcgca ctgcctcgcc
     2341 tggttctggc gcgcgacctt cgacaactgc tgcgcgatga acaaaaacgt cgccgcgctt
     2401 ttgcgtgtcc gtcacacgca actgtccgag ctctgtccaa tcgtgccccg gcacgtgaag
     2461 caatccccgg tcgccgacct gcccgcccat ctccgcgtag aagggcgtcc gatccagaac
     2521 gacattaacc tcactctttt ttttacctgg cagaacggtc tcgacgactg cctcggtctc
     2581 gagaaaatcg tatccgagaa attttgtcgg ttcgactccg agctcgcctt cttcaacact
     2641 gatttcctcc tttttctgtg ccttgcgcgc gcgctcacgc tgttcgtcca tcaacctttc
     2701 gaacccagca acatcgaccg tgagtccgcg ctcgcgcgcc atcagttccg tgagatcgag
     2761 aggaaagcca tacgtgtcgt aaagtttgaa cgcgaactcg ccggagatca cggaggtacc
     2821 ggggagcgcg ggcgcctcgc ccgcagtgtc acgcgcctcg cgggacactc gtgccggctg
     2881 cggcgtccat aaccacaagt agtcgtcagc tgacttagcc actcccgaat cccaggggtt
     2941 tcggcagata taatgaaact tctcctccaa atcgtgctcc gaacgaatga cacgatcgaa
     3001 tgattcattc tcccaaacgc gctgaccttt cacgcctccc agcttattga tgcgatgtga
     3061 cgaaacgctt ttcagagttt gcagaatatc gctcaacgtg aagaagaccg gagctccctt
     3121 agcgtcttca ttttcaatct gcggctccag cagtaaatga acgtggtcgg gcataacgca
     3181 cgcggcatag agttcgtatt tcttgctcgc atcatgcaaa atggtctgga gcgtgatgtc
     3241 ctgctctgcg ggagaaagtt ttcgatgccg cagcgttgta aaggtgacca tgtatttcgc
     3301 ccacgggcgc tcgaattgcg gcagacgacg tttgtagtgc gtcgcgccgg gagctttcgt
     3361 tggtgtgtcc cgcgaggcgc gtgacaccgc gggcgaggcg cccgcgctcc ccagaatgcg
     3421 cgcgacttcg cgctcaaata actcgatgcc tctgtcgagt gttttgttaa aggcttcttc
     3481 ctcgcggcga attgtttctt tgatttttga ttgctgcgtc cggacttctg gaaagacgtc
     3541 gcccatcgtt ttcgcgacga catcaataag cttaaaaaag aagggctcgt gaaaaccaag
     3601 cgtgcgcccg taacggaccg cacgacgaag aatgcgacgc aagacgtaac cacggccttc
     3661 atttgacggg atgattccat cggcaattgc gaacgacaac gcgcggacgt ggtcggcgat
     3721 gacgcgaaag gcgatgtcga tcttttcctg ttcaccttcg ccgccgctgc cgtgtgtcgg
     3781 cagcgtgctg gcgtatttct tgccgcttag tttttcgatc tcatcgaaaa tcgggcggaa
     3841 aacgtcggtc tcgtaattcg aagtcgttcc agaaaaatca gtgagattcc tggtgccctg
     3901 aataattgca acggcgcgct cgaaacccat tccggtatcg acgtgtcgct gcggtagcgg
     3961 cacaaagtcc atgcggccgg gatcaccgcc cccggctaca ggctgcgcgt tgaactggat
     4021 gaaaacaagg ttccaaatct cgatgcagcg cggatcattt ttgttcacga gcgcgccacg
     4081 ggtgtcgcca tccggcgtaa gatcgacatg cacttccgag cacggcccgc aggggccggt
     4141 atcgcccatc atccagaaat tgtcggcttt cccgctgctg agaacgtgaa cttttggatc
     4201 gagatcggct tcgcgaaaaa ggcgggccca gtggtcgtac gcttcctgat cgaactcgct
     4261 cggttcgccg ggtccaggtt tgtaaacggt cgcgtaaaga cgttgagcag gaaatttcca
     4321 gcgttcgacg agtaattccc acggccactc gattgcttcc tttttgaaat aatcgccgaa
     4381 gctccaattg ccgagcattt cgaaaaacgt gtggtgatag gtgtcgaggc cgacgtcttc
     4441 gagatcgtta tgttttcctc cggcgcggat gcatttttgg gtgtcggcta cgcgtggcgg
     4501 tttccatggc ggtctttgtt gcccgagaaa aatcggcacg aactggttca tgccggcatt
     4561 cgtgaacagg agattcgggg cgtcgggcag aagcggcgac gacggcacaa tggtgtgctt
     4621 tttctcgcgg aagaaatcga gaaatgattg ccgtatctca gccgacgtca tgggtaatca
     4681 cgaataaaca cgaatttcag gaaacctgaa accgccacgc tcaattgcgc cgacaggtcc
     4741 gccacggcgg attcgccctt taacgaacga gatgccccct gccccaca
//
LOCUS       DATDAJ010000305         3980 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1768374, whole genome shotgun sequence.
ACCESSION   DATDAJ010000305 DATDAJ010000000
VERSION     DATDAJ010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1768374"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..1157
                     /locus_tag="VIS53_07625"
     CDS             39..1157
                     /locus_tag="VIS53_07625"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY5767690.1"
                     /translation="MSRFLLTTFLISVLGANLVAQSPAPTSTPQTGPKSPAQPTPSPS
                     ATPTLEELVDSLGPADLQAFITLLKANFTDPDAITDTELSRATVEGLLVRLPRGITLL
                     AGKENVSAATPGAFYSELIAGRTGYVRLGTLNNANLQALDKALSGFATKKVNDLIVDL
                     RASSATNDLSMATEFAKRFCPKGKPIFTVRKPTAHQDRVFSSDRDPAFRGLVMVLADS
                     DTSGAAEAIAAALRFYNKALVIGQPTAGRAAEYSDLPLPNGKDLRLAVAEMVSPEGRS
                     LFREGVKPDLPVEMSLSEKRQIFQSNSEKGMGPFIYETGRPHMSEAALLAGTNPELEA
                     AEAAQQRRGRAPEKPPPHDPVLQRGLDVVTSLEVYQKR"
     gene            1248..1973
                     /gene="rnc"
                     /locus_tag="VIS53_07630"
     CDS             1248..1973
                     /gene="rnc"
                     /locus_tag="VIS53_07630"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEY5767691.1"
                     /translation="MISLRIRDVTPLEKRIEYKFRNSLLLAEAVTHPSLGHEAQHYHF
                     DYQRLEFLGDAVLQLVITEYLFSHFHTEAEGQLTKLRSRLVSRDALRAHAATLDLGRY
                     ILMGRGEEASGGRERTSTLADAFEALIGALYLDGGLDVAKNFILTQTRTDLAKLAEEP
                     VDFNPKGDLQELLQSISPRSPVYELVSQSGPEHEKTFVSEVVWEGIFLGEGTGRSKKQ
                     AETAAALEALQLKRWEKKPEAGT"
     gene            complement(2049..2927)
                     /gene="thiD"
                     /locus_tag="VIS53_07635"
     CDS             complement(2049..2927)
                     /gene="thiD"
                     /locus_tag="VIS53_07635"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:NF020132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEY5767692.1"
                     /translation="MVGRDRRARRRRANPNETIQHRIQSPPIALTIAGSDSSAGAGIQ
                     ADLKTFTVLGVYGLTAVTCIVAEVPRKVSRIEPVTARMVREQIEVLLKNFGVGAMKTG
                     LLCSAEIVCAVAQTIQKDEKKAARSIPLVVDPVMIATSGDNLLEPKAVEAYKNKLFPL
                     ATLITPNLDEAALLLETTIANRRQMASAAKALAKKYQTSILLKGGHLRCDNAVDLLFH
                     HGELTEFSAPFGHGVETHGTGCTYSAAITAGLTSGFSLEQAIKRAKKFVTESIARRFR
                     WKSKSGNILNALRHSS"
     gene            complement(2928..3167)
                     /locus_tag="VIS53_07640"
     CDS             complement(2928..3167)
                     /locus_tag="VIS53_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEY5767693.1"
                     /translation="MADSANKYPENVPGKFYVDDQCIDCDLCRETAPANFKRNDDGGH
                     SYVYKQPETPDEEGLCKEAMEGCPVEAIGSDGNGA"
     gene            3328..3570
                     /locus_tag="VIS53_07645"
     CDS             3328..3570
                     /locus_tag="VIS53_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767694.1"
                     /translation="MKQDAAKSLRAFAAELAIYAVLVTGYFFLVLHVLGDWLYRLETQ
                     HRIVYAVVAILLIAGQAVVLDAITTVLFRLLRRRWR"
     gene            3574..>3980
                     /locus_tag="VIS53_07650"
     CDS             3574..>3980
                     /locus_tag="VIS53_07650"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY5767695.1"
                     /translation="MFFPISDSHINPLYLVVVGFVIGILGGFFGVGGSFIAGPALRLM
                     GVDWNYAVGTDLAHIVGKSIVAARKHRTLGNVDLKLGMIMAVGTIGGAEGGAQLIQAL
                     KRAGNVNAVVSWVAIVVYVSISIFMLWESHKTL"
BASE COUNT          860 a         1047 c         1117 g          956 t
ORIGIN      
        1 ctggatgctg ttacagctaa cgtgaccgaa ttattgtgat gtctcgattt ttgctgacca
       61 cgtttcttat ctccgtcctg ggtgcgaatc tggtcgctca gtcgccggcg ccgacatcaa
      121 cgccgcagac tggaccaaag tcgcccgcac agccaacgcc ttccccatcg gctacaccta
      181 ccttggaaga gctggttgac tcgttaggcc cagccgatct gcaggcgttc atcacattgt
      241 tgaaggctaa ttttaccgac ccggacgcaa ttaccgacac cgagttaagt cgggcaactg
      301 ttgagggctt gctggtgcgg ttgccgcgtg ggatcacgct tttggcaggc aaagaaaacg
      361 tttccgccgc aactccgggc gcgttttaca gtgagctgat cgccggacgc accggctacg
      421 tgagactggg aacattgaac aatgccaatc tgcaagcact cgataaggct ttgagcggtt
      481 tcgctacaaa aaaggtgaat gatctcattg tggatcttcg cgccagttcc gcgacgaatg
      541 atttatcgat ggccacggaa ttcgcgaagc ggttttgtcc gaaggggaaa ccgatcttta
      601 cggtgcgcaa accgacagcc catcaagacc gggtatttag ttccgatcgt gacccggcat
      661 ttcgcggact ggtaatggtg ctcgccgaca gcgacacaag cggcgctgca gaagcgattg
      721 cggctgcatt gcggttctac aacaaggcac ttgttatcgg tcaaccaact gccggtcgcg
      781 ccgccgaata ttcagacttg ccattgccca atggcaagga tctgcggctc gcggtggctg
      841 aaatggtctc gcccgaaggt cgatcactgt ttcgggaagg cgtgaaaccg gatttgcccg
      901 tcgaaatgtc attgtcagag aagcgacaga tttttcagtc gaacagcgaa aagggaatgg
      961 gaccgttcat ttacgagacg gggcgtccgc atatgagtga agctgcgctg ttagccggca
     1021 caaatcccga gttagaagcc gccgaagcag cccaacaacg ccgcggccgt gcgccggaaa
     1081 aaccgccgcc tcacgatccg gtcttacagc gtgggctgga cgtggtgact tcgctggaag
     1141 tttatcaaaa acgataaacg gcgctcacgt cgttttgcgt tttttttaac agtctgtatc
     1201 agatgccgtt cgcttaggca ttggggtttt acagttgacg agattctttg atttcgctca
     1261 gaatcagaga tgtgacgccg ctcgagaaac gtatcgagta caagtttcgc aattcgcttt
     1321 tgttggccga agcggtaaca cacccgagcc tcggacacga agcgcagcat tatcactttg
     1381 attatcagcg tttggagttt ctcggcgatg cggtgctcca actcgtcatc accgaatatt
     1441 tgttcagcca tttccacacc gaagcggaag gacaactcac gaaattgcgt tcacggctgg
     1501 tttctcgcga tgcgttaagg gcgcacgctg ctacgctcga tctgggccgg tatattttga
     1561 tgggacgtgg agaagaagcc agtggcggcc gggagcgtac atccacattg gccgacgcat
     1621 tcgaagcgct catcggcgcg ctttacctgg atggtggtct cgacgttgcc aaaaatttca
     1681 ttctgacaca gacccggacc gatctcgcga aattggcgga agagccggtg gattttaatc
     1741 cgaagggcga tcttcaggag ctgttacaaa gcatctcgcc gcgcagtccg gtttacgagc
     1801 tcgtttcaca gagcggacct gagcacgaaa aaacttttgt ctcagaagtt gtttgggaag
     1861 gaatttttct tggtgagggc accgggcgga gcaagaaaca agcggaaacc gcggctgcgc
     1921 tcgaagcgtt gcaattaaag cgctgggaga aaaagccgga agcggggaca taaccgccct
     1981 acgagaatag gaatcgcgga gcgtccgttt gagatgccgg cgcgtccgcc ggtcggcgcc
     2041 ctaccagctc aggaggaatg cctgagcgca ttgagaatgt tcccagattt cgacttccaa
     2101 cggaaacgtc gcgcgatcga ttcggtgaca aactttttcg cgcgcttgat tgcctgttct
     2161 aacgagaagc cggacgtcag acccgcagtg attgctgccg aatacgtgca accggtaccg
     2221 tgtgtttcga cgccgtgccc aaacggcgcc gagaactctg ttaattcgcc gtggtgaaaa
     2281 agtaaatcga ccgcgttgtc acagcgaaga tggccgcctt tcaacaggat cgacgtctga
     2341 tatttctttg cgagagcttt tgcagcactc gccatttgtc ttcggttagc aatcgtggtc
     2401 tcaagcaata aggctgcttc gtcgagattc ggcgtgataa gtgtcgcaag cggaaacagt
     2461 ttgtttttgt aagcttcaac agctttcggt tcgaggaggt tgtcgccact cgtcgcaatc
     2521 attaccggat cgactaccaa agggatggat cgcgctgctt ttttttcgtc tttttgaatc
     2581 gtctgtgcga cagcgcaaac gatctccgcc gagcagagca gaccggtctt catcgcgcct
     2641 actccgaaat ttttgaggag cacttcgatt tgctcgcgaa ccattcgcgc agttaccggt
     2701 tcaattcgcg aaacttttcg aggaacttcc gcgacaatgc aggtcacagc ggtcaatcca
     2761 taaacgccga gaacggtaaa agttttcagg tcggcctgaa taccggcgcc agcgctactg
     2821 tcggaacctg caatggttag agcgatgggc ggtgattgaa tccgatgctg aattgtttcg
     2881 ttcggattgg cgcgtctgcg gcgcgcacgg cggtcgcgcc ctaccattta ggcgccgttc
     2941 ccgtcgctgc cgatcgcttc gaccgggcag ccttccatcg cttctttgca gagaccttct
     3001 tcgtccggcg tctccggctg cttgtaaaca taggaatggc cgccatcatc gtttcgtttg
     3061 aaattggcgg gagccgtttc gcggcacaaa tcgcagtcta tgcactgatc atcgacgtag
     3121 aatttgcccg gtacgttctc ggggtatttg ttcgctgagt cggccatgtt tccctgaagg
     3181 tgagatggaa cgttaagaag aaaggttcct aacgcaataa tgtgcccgct gattggttca
     3241 gacgcaaccg caacgtggcg ctggcacgta tctcctcaaa cgtaaacgcg ctctcgcatt
     3301 taacgacctg ccccttaacc tgcccgcatg aaacaagatg ctgccaaaag cctgcgcgcg
     3361 tttgcagccg agttggcaat ctatgcggtt cttgttaccg gttatttctt tttagtcctc
     3421 catgttctag gcgactggct gtaccggctc gaaacgcagc atcgcattgt ttatgcggtc
     3481 gtcgccatct tgctcatagc tggtcaggcc gttgttctgg atgcgataac cacggttttg
     3541 ttccggcttc tgcggcgccg ttggagatga gccatgtttt ttccaatctc cgactcgcac
     3601 atcaacccgc tttatctggt cgtcgtcggc tttgttattg gaattctggg cggctttttt
     3661 ggcgtaggcg gaagttttat tgcaggtccg gcgttgcgcc tgatgggagt cgattggaac
     3721 tacgcggtcg gaacggacct ggcgcacatt gttggcaagt cgatcgtcgc agcgagaaaa
     3781 catcgcactc ttggcaacgt cgatctgaag ctcggaatga tcatggccgt ggggacgatc
     3841 ggcggcgccg aaggtggcgc acaactgatc caggcactca agcgcgctgg caacgtgaac
     3901 gccgtcgtca gctgggtcgc cattgttgtg tatgtcagca tttcgatctt catgctctgg
     3961 gagagccaca aaacattgaa
//
LOCUS       DATDAJ010000306         2759 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1773792, whole genome shotgun sequence.
ACCESSION   DATDAJ010000306 DATDAJ010000000
VERSION     DATDAJ010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2759
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1773792"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VIS53_07655"
     CDS             <1..508
                     /locus_tag="VIS53_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767696.1"
                     /translation="TATPTATATATATGTATPTATPTATATVTPSVTPTPTPTPGGCV
                     FGQGYWKNHEQWPVNQLQLGNRTYNRQELQSILRQPAPRVRGGNGLIQLAHQEIAAKL
                     NIANGADGSCVAQTLAAVDASIGNLVIPPVGNGHLPPSSNVRILGLYNEGGLCAPRCD
                     SPRPTPGR"
     gene            591..1016
                     /locus_tag="VIS53_07660"
     CDS             591..1016
                     /locus_tag="VIS53_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767697.1"
                     /translation="MNTPIQTPIERPQKDLLAKPVRTSIFALIFIVLTFACFALSPTA
                     EAANDSNTKLSKDALKEMRDNEGKVNTVRYEQINAMLLNEFLKEHKAFIEEQGKVKKL
                     EAGLADLVATVKEQAAQIEKVSAEIQSRQPIQSLARNLP"
     gene            complement(1151..2575)
                     /locus_tag="VIS53_07665"
     CDS             complement(1151..2575)
                     /locus_tag="VIS53_07665"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEY5767698.1"
                     /translation="MITAPLLETAVLVLGVVILMIEAFVGKIDKRVLAFAAITGLAIV
                     LLASFFVIPSPSPSHATGFWSFYTADRLAIFFKQFALLTTILVLIMMIDYAPVVRSFF
                     PDAAPQTGLGEFVALPLFTCAGLMYLVSAIDFVFIFVALELVTVSFYVLVSFTRRNPL
                     TLEAGTKYLVLSALSTAFLVYGIAWIFGATGQTNLYQLTAALANPASYSGAALLGMVF
                     VLVALGFKIAAVPFQIWVPDVYQGAPTPVTAYLSVASKAAGFVVLIRVLQPFMKLPQT
                     QRLIFVIALLTLIYGNLAALPQTNLKRLLAYSSIAHAGYLLIGVVCFDVRAITFYLAA
                     YLLMTLLSFAVLIIVAQQTGEESSDFDGLAKRSPFLAFAMLIGMVSLAGVPFTAGFLG
                     KFYIFYAAVLQRQIALVVVGVITVGCGFYYYLKVVRAMYWQSDSKTDAIPVNGLSRVA
                     ISALIVATIWLGVYPQPILDALKP"
BASE COUNT          783 a          744 c          739 g          493 t
ORIGIN      
        1 aacagcaacc ccaacagcaa cagccaccgc gacggcaacg ggtacggcga ctccaactgc
       61 aaccccgacc gcgacagcga cagttactcc cagtgtaaca ccgacaccta ctcccacacc
      121 gggcggttgt gttttcggac aaggttattg gaagaaccat gagcagtggc cggtaaatca
      181 attgcagctt ggcaaccgca cttataaccg gcaggaattg caatccattc tacgtcaacc
      241 agcaccgcgc gtgcgcggtg gcaatggcct gattcagctg gcacatcagg aaatcgctgc
      301 aaaactgaat atcgccaatg gcgcggatgg aagttgtgtc gcgcaaacgc tggcggcagt
      361 cgatgcgtcg atcggcaacc tggttattcc gccagtgggc aacggccacc tgccaccgag
      421 ttctaatgtg cgaatcctcg gcctttacaa cgaaggcggt ttgtgcgctc cacggtgcga
      481 ttcgccgagg ccgacaccag gccggtgata acaattgccg cctccgtgag gacgctgatt
      541 ttaagactaa aaaccacaac taaaaagcga aatagaaagc aataatactc atgaacacgc
      601 caatccaaac cccaattgag cggccacaaa aggatctgct cgcaaaaccc gttcgtactt
      661 cgatcttcgc tttgattttc atcgtgctca ctttcgcctg ctttgcgctt tccccgacag
      721 cagaagcagc taatgacagc aatacaaagc ttagcaaaga cgcgctcaaa gaaatgcgcg
      781 acaacgaggg caaagtcaac actgtgcgct acgaacaaat caacgccatg ttactcaacg
      841 agttcctcaa agagcacaag gcgtttatcg aagagcaggg gaaagtgaag aaattagagg
      901 caggactcgc agatctcgtg gcgacggtga aggagcaagc cgcgcaaatc gaaaaagtga
      961 gcgccgagat tcagagtcgc caacctatac aaagcttagc taggaatctt ccgtaagcgc
     1021 cggagttgaa gcgtgcgccg cggccatagt acaaggctgc ggtcggaatg aaatattaaa
     1081 ataatgtggc tggggtcgtc gatcccgggc acagcttgta cagcgggtct ttgttcgacg
     1141 cttcgatttg tcagggcttg agcgcgtcaa gaatgggttg cggataaacg cctagccaaa
     1201 tcgtggcgac aattaatgcg ctgatcgcca ctcgcgagag cccgtttaca ggaatggcgt
     1261 cggtcttgga atcagactgc caatacatcg cgcgaacaac cttgaggtaa tagtagaatc
     1321 cgcagcccac cgtgatcact ccaaccacca cgagtgcaat ctgacgctgc agaacggctg
     1381 cgtaaaagat gtagaacttg ccgagaaatc ctgccgtgaa cgggacaccg gcaagcgaga
     1441 ccattccgat caacatcgcg aaggcgagaa atggcgagcg tttggcaaga ccatcaaagt
     1501 cggaactttc ttcaccggtt tgctgtgcca cgattattag cactgcaaaa ctcaacaggg
     1561 tcatcagcaa gtaagcggcg aggtagaagg taatcgcgcg gacatcgaaa cagaccacgc
     1621 cgatgagcag ataacccgca tgcgcaatgc tcgagtacgc gagcaggcgt ttcagattcg
     1681 tctgcggtag cgctgcgaga ttgccgtaaa tcaaagtgag cagagcgatc acaaaaatca
     1741 gtcgttgtgt ttgcggcagc ttcataaagg gttgcaaaac acgtatcaac acgacgaacc
     1801 ccgctgcttt cgaagcgacg gagagatacg cagtcactgg cgtaggcgca ccctgataaa
     1861 catccggcac ccagatttgg aagggaacgg ccgcaatctt gaaaccgagg gcgaccaaca
     1921 caaaaaccat gcctaacaac gctgcaccgg agtagctggc aggattcgct agtgccgcgg
     1981 ttaactgata gagatttgtc tggccagtcg cgccgaaaat ccatgcaatt ccgtacacaa
     2041 gaaacgccgt ggaaagcgcg ctgagtacga gatacttcgt tcccgcttcg agggtcaatg
     2101 gattgcgccg ggtaaaactg accagcacgt agaacgacac ggttactagc tcgagcgcga
     2161 caaaaatgaa aacaaagtcg atcgccgaaa ccaggtacat caacccggca caagtgaaaa
     2221 gaggcagcgc gacaaattcg ccgagacctg tctgcggcgc ggcgtcagga aagaagctgc
     2281 gcaccactgg cgcgtaatcg atcatcatga tcagcacaag aatggtggtt agcagcgcga
     2341 attgcttgaa gaagatcgcc agccgatccg ccgtgtaaaa actccagaaa ccggtcgcgt
     2401 gagagggcga cggagaggga atgacaaaga aactggcgag aagaactatc gcgagcccgg
     2461 taattgcagc gaaagctaaa acgcgtttat ctattttccc gacaaacgcc tcgatcatca
     2521 ggatcaccac tccaagcacc agcaccgcag tctcaagtaa gggcgcggtg atcatcggat
     2581 gctgtagcca cggccctgtg gggcgtgttc tcggcccgac ccaaccgttg gcaaacggcg
     2641 catagcgccg tagctacagg tctgcgtatc tgagttggcc gagagaaaat tcccgaacgt
     2701 ccgagccaca cttcgcacaa aaaattgcgg aaaaaatcca cagcagagaa gtgctgcca
//
LOCUS       DATDAJ010000307         2836 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1780452, whole genome shotgun sequence.
ACCESSION   DATDAJ010000307 DATDAJ010000000
VERSION     DATDAJ010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1780452"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..311
                     /locus_tag="VIS53_07670"
     CDS             <1..311
                     /locus_tag="VIS53_07670"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEY5767699.1"
                     /translation="ALLSKWETQYVLITLGEHGMMLFRQNEAPHYISTKARQVFDVSG
                     AGDTAIALFTLGLVSGATPIEAAEIANYGSAVVVSKLGTATVTRDELIASFREDSEGG
                     "
     gene            268..840
                     /locus_tag="VIS53_07675"
     CDS             268..840
                     /locus_tag="VIS53_07675"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY5767700.1"
                     /translation="MNSSPAFERIAKVGEALSSAVFIDRDGTIMEDTDYCSHPKDVRI
                     FPGVVEALRRLKSGGFKLIIITNQSGIGRGIFTLDQYRAVESEVLRQLGDGLVDATYY
                     CPDAPGQHSKCRKPAPGMVVKATRDHEIDLSRSFLIGDKEIDVECAHNAGVRAIRVRT
                     GIQNDVTESNADWIADDMPAAVEIILNPKS"
     gene            971..1726
                     /gene="kdsB"
                     /locus_tag="VIS53_07680"
     CDS             971..1726
                     /gene="kdsB"
                     /locus_tag="VIS53_07680"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEY5767701.1"
                     /translation="MTAMNKAIGIIPARWSSTRFPGKPLHLIAGKALLQHVWERCRGA
                     KNLDSVIVATDDMRIAEAAFKWGADVALTSPSHCSGTDRIAEVARNAKEVSFIINIQG
                     DEPLVDPRLIDKIVGKLRSDHTIGIVTAAHPFEHPEDALSPHQVKVVVDLAGNALYFS
                     RAPIPFQEKGCSLSLRHQGIYGFRRSALLHFVKSKPAPLERAESLEQLRALENGVKVH
                     VLTTAKGSPGIDTPADAEALEQKLARTERRVSR"
     gene            1723..>2836
                     /locus_tag="VIS53_07685"
     CDS             1723..>2836
                     /locus_tag="VIS53_07685"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY5767702.1"
                     /translation="MKYIFVTGGVISSLGKGLTAASLGTLLEARKLRVVLQKFDPYLN
                     VDPGTMNPFQHGEVYVLNDGAETDLDLGHYERFTNCVLTRHNNLTSGQVYETVILKER
                     RGDYLGKTVQVIPHVTDVIKDRIRKLSDESKYDVVITEIGGTTGDIEGLPFIEAIRQF
                     ILEVGPENVVNMHVTLVPYIKAAHELKTKPTQQSVAKLREIGLQPQVLICRSERPLDR
                     DVRRKLSMFCSVVEKAVIEERDVEHTIYEVPLTLHAEGLDQLVCDLLHLETPKPDLND
                     WRKFVDCVISPSKRVRIAVVGKYMDVRDAYKSIYESLTHAAASEDCGIDLKLIDAESL
                     ANGIDDQLEDVAGVLIPGGFGVRGAEGKINAARYARE"
BASE COUNT          687 a          742 c          796 g          611 t
ORIGIN      
        1 aagcacttct cagcaaatgg gaaactcaat atgttctgat cacgctgggc gaacacggaa
       61 tgatgctttt ccggcagaac gaagcaccgc actatatcag cacaaaggct cgtcaggttt
      121 tcgatgtatc gggtgcgggc gacaccgcga ttgcgctctt cacgcttggg ctcgtcagtg
      181 gcgcgacgcc gattgaagcc gcggagattg ccaactacgg aagcgctgta gtcgtcagca
      241 aacttggaac ggcaactgtg acgcgagatg aactcatcgc cagctttcga gaggatagcg
      301 aaggtgggtg aggcgttgtc gtcggccgtc tttatcgatc gcgacggtac gatcatggaa
      361 gatacggatt attgttccca tccgaaggac gtgcggattt ttcctggggt ggttgaggcg
      421 ctgaggcgtt tgaaatcggg aggattcaaa ctaattatca tcacaaatca aagcgggatc
      481 gggcgcggga tcttcacgct cgatcagtat cgcgcggtcg aatcggaggt gctacggcag
      541 cttggcgacg gtttggttga cgctacttac tactgtccgg atgctcccgg gcaacattcg
      601 aagtgccgca aacccgcgcc aggaatggtt gtcaaagcca cgcgagacca tgagatcgat
      661 ctttcgcgtt cgtttttgat tggcgacaag gagatcgacg tcgaatgcgc tcataatgcg
      721 ggtgtacgag cgattcgcgt gcggaccgga attcaaaacg acgtgacaga aagcaacgca
      781 gattggatag ccgatgacat gcccgcagcg gttgagatca ttttgaaccc aaagtcatga
      841 tcccctgtcg ttccgagcaa atccgaggct gcaacgcagc ggacgaagtt cgcgaggcca
      901 gacttccaat cccgcagctt taccagagat tagtcacggg atccttcgac tccggttcgt
      961 ttcgctcaga atgactgcca tgaataaggc gatcggcatt attccagcgc gttggagttc
     1021 tacgcgtttt cctggaaaac cattgcatct gattgcaggc aaagctcttt tgcaacatgt
     1081 atgggaacgg tgcagaggag cgaaaaatct tgattcggta atcgtcgcca cagacgatat
     1141 gcgcatcgcc gaggctgctt ttaagtgggg cgccgacgtg gcgctcactt caccaagcca
     1201 ctgtagcggc acagatcgaa tagcagaagt cgcacgcaat gcgaaagagg tctcgttcat
     1261 catcaacatt cagggggatg aaccattggt ggatccgcgg ctaatcgaca agatcgtagg
     1321 gaaactccgc tcggaccaca caatcgggat cgtcaccgcc gcgcatccgt tcgaacatcc
     1381 agaagacgcg ctgtcccctc accaggtcaa agtggttgtc gatcttgctg gaaacgcgct
     1441 ctatttctcg cgcgcgccga ttccattcca ggagaagggc tgctccctgt cacttcgtca
     1501 tcagggaatt tacggctttc gtcggagcgc ccttctacac ttcgtgaagt cgaaacccgc
     1561 tccgctcgaa cgtgctgagt cgctcgagca attgcgagca ttagaaaatg gtgtaaaggt
     1621 tcatgtgctc accaccgcga agggatctcc cggcatagac accccagccg acgccgaagc
     1681 gctggagcaa aagcttgctc gcacggaacg gagagtgtct cgatgaaata catttttgtc
     1741 actggcggcg tcatcagttc gttaggtaag gggctgactg ctgcctcatt gggaacgttg
     1801 ctcgaagctc gcaagttgcg tgttgtactc caaaagtttg atccgtatct caatgtcgat
     1861 cccggaacga tgaatccgtt ccagcacggg gaagtctatg tgctaaatga cggcgcggag
     1921 actgatctcg atcttggcca ctacgagcga ttcaccaatt gcgtgctcac gcggcacaac
     1981 aatctcacca gcggtcaggt ttacgagacg gtgattttaa aggaacgccg gggcgattat
     2041 ctaggcaaaa ccgtacaggt gattccacac gtcaccgacg tgattaagga ccgcatccgc
     2101 aaactttcag acgagagcaa atacgacgtg gtgatcacgg aaatcggagg caccactgga
     2161 gacatcgaag gtcttccgtt tatcgaggcg attcgccaat tcattcttga agtcggcccc
     2221 gaaaatgtcg tgaacatgca tgtcacgctc gttccctaca tcaaggccgc gcacgaatta
     2281 aaaacaaagc cgacccaaca gagcgtggcg aaactgcgcg aaatcggatt gcagccgcag
     2341 gtcttgattt gccgctcgga aagaccgctc gaccgcgatg tgcgccgtaa gctgtcgatg
     2401 ttttgcagcg ttgtggaaaa ggcggtgatt gaggaacgtg acgtcgagca cacgatttat
     2461 gaggtgccgt tgactctgca cgccgaggga ctcgaccaac tcgtatgcga tcttctgcat
     2521 ctcgaaaccc ccaaacccga tctgaacgac tggcgaaaat tcgtcgactg cgtcattagt
     2581 ccgagcaaac gcgtcaggat cgcggtagtc ggcaaataca tggatgttcg cgatgcgtac
     2641 aagagcatct atgaatcgtt gacccacgcc gccgcgagcg aagactgcgg aatcgatctc
     2701 aaacttattg atgctgaatc gctcgcgaat ggtatcgatg atcaactgga agacgtagcc
     2761 ggcgttctca ttcccggcgg atttggcgtt cgcggagcag aaggaaaaat caacgccgcg
     2821 cgttacgctc gcgagc
//
LOCUS       DATDAJ010000308         2611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1788229, whole genome shotgun sequence.
ACCESSION   DATDAJ010000308 DATDAJ010000000
VERSION     DATDAJ010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1788229"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..609
                     /locus_tag="VIS53_07690"
     CDS             <1..609
                     /locus_tag="VIS53_07690"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEY5767703.1"
                     /translation="TFMEAMVKPVASYRHLLKEKVDVWAVGPGLGKSRAAEILELVEK
                     VKQPMVLDADGLNIVSEKTSVLRRCKGKRLLTPHPGEMKRLFPEDQRSRGKTATKFCD
                     HFPVTLLLKGSRTIVAERDRPLSYNTTGNPGMATGGMGDVLTGVCAGLLGQGLSLYDA
                     ARIGAWLCGRAAEIAIFNGNQSEQSLLPRDVLDHLGDAFKEL"
     gene            701..2020
                     /locus_tag="VIS53_07695"
     CDS             701..2020
                     /locus_tag="VIS53_07695"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5767704.1"
                     /translation="MARFVLIGSGLAGGLLAAYLGRRGHEVDLFERRADPREGNIVGG
                     RSINLAISTRGIHALEQIGIAEEALQHAIPMRGRMIHDKSGELHFSPYDVDPKKCINS
                     IERAALNTTVIEAAQRYPNVRVHFNHKCTEIHLESASAQLETAHGAVTARGDAVVGVD
                     GAFSAVRKSMQSEIAKFQYDESYLAHGYKELTIPPGPDGSWRMEKNALHIWPRKSFMM
                     IALPNPDGSFTCTLFWEFEGSRSFATTKTDDDVRRFFDEEFSDAVPLMPSLLDDFRNN
                     PTGSLVTIRCAPWFYRDKTCLVGDAAHAVVPFYGQGMNAAFEDCVVLDECLEEFHENR
                     ERAFAEYFRRRKENADALADLAIENFIEMRDKTASKTFRAKKKLDHALEAALPGIYLP
                     LYTMVTFTRMPYAKAAKRAQIQNSLVYASLFLIAAISVATIVWLFAS"
     gene            2144..2587
                     /locus_tag="VIS53_07700"
     CDS             2144..2587
                     /locus_tag="VIS53_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5069 domain-containing protein"
                     /protein_id="HEY5767705.1"
                     /translation="MAETYVPLISSGIAGPLGVLHLPRLWQKVSLEESGKLASGYPGV
                     GKGFDAMTLAALGLEEQAVRDYIRKNKPTYPQFEAWVKQNSKSLNQDSIEKHNAAVRG
                     YNHDDETRKGILDACKIADDASSPKDAVNLNNLDDWYEFHQAVLA"
BASE COUNT          621 a          700 c          728 g          562 t
ORIGIN      
        1 acgttcatgg aagcaatggt aaagccggtc gcgtcgtacc gtcacttgct gaaggagaaa
       61 gttgatgtct gggccgtggg cccgggtctt ggtaaatcgc gcgcggccga gatccttgag
      121 ctcgttgaaa aagtgaagca acccatggtg ctagacgcgg atgggctgaa catcgtgtct
      181 gaaaaaactt cggtgctccg gcgttgcaaa ggcaaacggt tgctgacccc gcatcccggc
      241 gaaatgaaac ggcttttccc ggaagaccaa cggtcgcgcg gcaaaacagc gacgaaattc
      301 tgtgatcatt ttccggtcac acttttactc aaaggcagtc gaaccatcgt cgctgaacgc
      361 gatcgaccgt tgagctacaa tacgacgggc aaccctggaa tggctaccgg cggaatgggc
      421 gacgttctca ccggagtgtg cgccggttta ttggggcaag gcctctcgct ttacgacgca
      481 gcgcgaatcg gcgcatggct atgcggtcgc gcagccgaga tcgcaatctt caacggcaac
      541 cagagcgagc aatcgctgtt gccgcgcgac gttctcgatc acctcggcga cgcattcaag
      601 gaactgtagg gcgtctgtgt cagacgctgc gaaacagaag ggcatccgtt tcgcaatctt
      661 tcctgctttc ctgcgttcct gattcgtaga ttcttactaa gtggcaaggt ttgttctgat
      721 cggcagcggt ctcgctggcg gattgctcgc cgcatatttg gggcggcgag gccacgaggt
      781 ggatctattc gagcggcgcg ctgacccgcg ggaagggaac atcgtcggcg ggcgctcgat
      841 caatctggcg atttcgacac gcgggattca cgcgctggaa cagatcggca tcgccgagga
      901 agcattgcaa cacgcgatcc cgatgcgggg ccggatgatt cacgataaat ccggcgagct
      961 gcattttagc ccgtacgatg ttgatccgaa aaaatgtatc aattcgatcg aacgcgcagc
     1021 gctcaacacc acggttatcg aagcggcaca gcgttatcca aacgtccggg tgcatttcaa
     1081 tcataaatgc accgagatcc atctcgagtc agccagcgcc cagttggaaa cggcacacgg
     1141 cgccgtaacc gcacggggcg acgcagtcgt cggcgtcgat ggcgcgttct ccgcagtgcg
     1201 caaatcgatg cagagtgaga tcgccaaatt tcaatacgac gaaagttatc tcgctcacgg
     1261 ctacaaggaa ttaaccattc cgcccgggcc ggacggttca tggcgaatgg aaaagaacgc
     1321 gcttcacatc tggccacgga aaagtttcat gatgatcgcg cttcctaatc ccgacgggtc
     1381 cttcacatgc accctctttt gggaattcga aggatcccgc agtttcgcca cgacgaagac
     1441 ggacgatgat gtgcgccgat ttttcgacga agagttctcc gacgccgttc cgctgatgcc
     1501 aagtttgctc gacgattttc ggaataatcc aacgggttca ctcgtgacca ttcgctgcgc
     1561 gccgtggttt taccgggaca agacttgcct cgtcggtgat gccgcgcacg cggtcgtacc
     1621 attttatggc cagggaatga atgctgcctt cgaagattgc gtcgtgctgg acgagtgtct
     1681 tgaagaattt cacgaaaacc gcgagcgcgc attcgccgaa tactttcgtc gccgaaaaga
     1741 aaacgccgat gcgcttgccg atctggcgat tgagaatttc atcgagatgc gagataagac
     1801 cgcgtcgaaa acatttcgcg cgaaaaagaa actggatcac gcgctggaag ccgccctgcc
     1861 tggaatatat ctgccgcttt acacaatggt cactttcaca agaatgcctt acgcaaaagc
     1921 ggcaaagcgg gcacagatcc agaattcttt ggtgtatgcg agcctgttcc taatcgcagc
     1981 gatctcggtt gcaacgatcg tttggttatt cgcaagctaa gccaactccg gactacaaaa
     2041 ggaagttcca tcgcgggaaa tccgccagat tgattaactt tggagatcac catgcgagcg
     2101 caaacttgca aatcgtccat gctgggatta ccaaaatggt actatggctg aaacttatgt
     2161 tccattgatt agttccggca ttgccggccc acttggcgtt cttcatctcc cgcgtctctg
     2221 gcagaaggtc tcgctggaag aatcgggcaa acttgcttcc ggttatccgg gcgtcggcaa
     2281 gggtttcgac gcgatgacac tcgccgcact cggactcgaa gaacaggcgg tgcgagatta
     2341 cattaggaaa aacaagccga cctatccgca gttcgaggcg tgggtgaagc agaattcgaa
     2401 gtccttaaat caggactcaa tcgagaagca caacgctgcg gtccgcggct acaatcatga
     2461 cgacgaaacg cgcaagggga ttctcgacgc atgcaaaatt gccgatgacg cttcttcgcc
     2521 aaaagacgcg gtgaacctca acaatcttga cgattggtac gagtttcacc aggcggtact
     2581 ggcatagatt taattcgatg gtttcccgtt a
//
LOCUS       DATDAJ010000309         4044 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1800008, whole genome shotgun sequence.
ACCESSION   DATDAJ010000309 DATDAJ010000000
VERSION     DATDAJ010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4044
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1800008"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..893)
                     /gene="lptB"
                     /locus_tag="VIS53_07705"
     CDS             complement(108..893)
                     /gene="lptB"
                     /locus_tag="VIS53_07705"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEY5767706.1"
                     /translation="MISQTAPVSIPKRSSAAAPKVETVLTTDQLVKIYGGRAVVDGVN
                     MNVRAGEIVGLLGPNGAGKTTSFYMIVGLIRPNSGRVIFCDTDVTDYPMYKRARLGMG
                     YLPQEESIFRKMTVEQNIMAILETLSLSKAERRNRCDQLLHQFGIERIAKNTALTLSG
                     GEKRRLTIARSLVTEPKLLMLDEPFSGVDPIAVYDVQQIIVNLRKSGLAIMITDHNVR
                     ETLSIVDRAYLIFDGRVESEGTKDFLINDPISRQLYLGERFKM"
     gene            complement(890..1633)
                     /locus_tag="VIS53_07710"
     CDS             complement(890..1633)
                     /locus_tag="VIS53_07710"
                     /inference="COORDINATES: protein motif:HMM:NF015901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEY5767707.1"
                     /translation="MKNLTVLVLVVACATGTRLHAQTPTMTPDAVTTAPKAVAAAPAK
                     KPKKQPAQKEDKSPANQLFGQSVTGLNSNEPITTEIYADEAFFDSTKNMGTFSGRVKV
                     TDPRFNLQSDKLTVFITKGENQGLEKAIAEGHVGLVRERPDPSGGQPTRAVGRAEKAT
                     YTAATGDVELRGTPRVQEGANMHVATSPDTVMIINQNSQLRTHGPSRTEIRQETKADQ
                     AKEKKREAKKAAAQAAPSQSVPAAALPTP"
     gene            complement(1630..2247)
                     /locus_tag="VIS53_07715"
     CDS             complement(1630..2247)
                     /locus_tag="VIS53_07715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767708.1"
                     /translation="MLWFQVGAIDLNRLGTKLRSKQRAVLVSLRWTLICLLFAVLSIL
                     IGLPNALAQSKGRKGKPRAKAGSSSSPGEQSLTNIPLPIGHEAKGLVLPDFDGDGHLR
                     GKFEAGTAHRIDQEHIGFEQLKITTYTPEDQPDLKIGMSTSVLDLKTRILSSKARTTI
                     ERADFNIAGDSVEFDTNSRTGRLIGNVKMVITDKSRFTTKPETKQ"
     gene            complement(2219..3049)
                     /gene="kdsA"
                     /locus_tag="VIS53_07720"
     CDS             complement(2219..3049)
                     /gene="kdsA"
                     /locus_tag="VIS53_07720"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY5767709.1"
                     /translation="MKRKPLHVGKVTIGGKNPAFILGPCVMESEKFAWRMARKIAQAC
                     AAENVDFIFKASYDKANRTSVRSFRGIGVREGCDILFDIGRELKIPVTTDVHSVTEAE
                     IAGEKIDILQIPAFLCRQTDLLRAAAETGRAINVKKGQFLAPWDMRNIAEKLIAFGNP
                     QFCFTERGTTFGYNNLVADMRSLYWMRDAGYRVIFDATHSVQRPGGAGDSTSGDGKLA
                     PVLARAAMAAGCDGIFMEVHENPARALSDGPNQVRLNDLPKHLRMLKAIHAVVSGRGD
                     "
     gene            complement(3097..3858)
                     /locus_tag="VIS53_07725"
     CDS             complement(3097..3858)
                     /locus_tag="VIS53_07725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02206 family membrane protein"
                     /protein_id="HEY5767710.1"
                     /translation="MSDAPEFQPYGLPHLTVIFITIVLPFALAAVVRRTKSLRIERVI
                     IAVLSAVLILNYLAYLVFIRSRGVVDWRQMLPMQMCDWGMVVVIVAMWTGHQRWFEVA
                     YFWGIGGTLQAVLTPNLRYGFPDWRFISFFTSHCGIIVGVVFLMLTRRYRPYPMSIVR
                     AWLWSEFYFVVTLAVDKLTGFNYGFLLHKPEAFSILSFLSDSWPLYLLQMHGVALLFF
                     LVLYLPFAIVDLIQRGRSTGGSGEPPLPVPRGDAG"
BASE COUNT          883 a         1194 c         1042 g          925 t
ORIGIN      
        1 attcgctcac ttcccgttcg ctcagcctgc ggccttctcg tctatgtcgc ggcttcccca
       61 gccgctccat tctcgacttc gctcggcatg acggcgctgg gccgccgtca cattttgaag
      121 cgttcgccca aataaagctg acgactgatg ggatcgttga taaggaaatc tttggtccct
      181 tcgctttcga cgcgcccatc gaaaatcaaa taggcacggt ccacgatgga gagagtctcg
      241 cgcacgttgt ggtcggtgat catgatggcc aaccccgatt tgcgaaggtt aacgatgatc
      301 tgttgcacat cataaacggc aatgggatca acgccgctga acggctcgtc gagcatcaac
      361 aacttcggct ctgtgaccag cgaacgggcg atggtcaaac gccgtttttc gccgccgctt
      421 aaggtcagcg ctgtattttt cgcaattcgc tcaatcccaa actggtgcag caactgatcg
      481 caacgattcc gtcgttcggc tttgctcagt gaaagcgtct ccaaaatagc catgatgttt
      541 tgttcgaccg tcattttacg aaagatcgat tcctcctgcg gcagataacc catgccaagc
      601 cgggcgcgct tgtacatcgg gtaatccgtc acgtcggtgt cgcagaaaat tacgcgaccg
      661 ctgtttggcc tgatcaagcc aacgatcatg taaaaactgg tggtctttcc cgctccattc
      721 ggcccgagaa gtccaacgat ctcacccgcg cggacgttca tgttcacccc gtccaccacc
      781 gcccggccgc cgtaaatctt caccagttgg tcggtcgtaa gaacagtctc caccttcggc
      841 gcggccgccg aagatcgttt cggaattgaa acgggggcag tttggctgat catggtgtcg
      901 gcagagctgc tgcgggcacg gactgagacg gtgcggcttg agctgcggcc ttctttgctt
      961 cgcgtttctt ttccttcgcc tgatcggcct tcgtttcctg acgaatttct gtccggcttg
     1021 ggccgtgagt tctcagttgg ctattttggt taatgatcat cacggtgtca ggactcgttg
     1081 ccacgtgcat gttcgctcct tcctggaccc ggggcgtccc tcgcaattcc acgtccccag
     1141 tcgcagccgt gtaagtcgcc ttttcggcgc gcccaactgc acgcgttggc tgaccaccgc
     1201 tcggatcggg ccgttcccgc accaacccca cgtgtccttc agcgatcgcc ttctccaagc
     1261 cttggttttc tccttttgta atgaacacgg tcaatttgtc agattgaaga ttgaaacgtg
     1321 gatcggtcac cttcactcgg ccgctaaatg tgcccatgtt cttggtcgaa tcaaaaaacg
     1381 cttcgtcagc gtagatttct gtcgtaatcg gttcgttgga gttcaacccc gtgacgcttt
     1441 ggccaaacaa ctgattggca ggcgatttgt cctctttctg ggctggttgt ttctttggtt
     1501 ttttcgccgg cgcggctgcg actgctttgg gcgcggttgt aacagcgtcg ggcgtcatag
     1561 taggcgtctg cgcgtgcaag cgtgtgccgg tagcgcaggc gacaaccaga accagcaccg
     1621 tcaaattctt cattgtttcg tctcgggttt cgtcgtgaaa cgcgacttgt cggtgatcac
     1681 catttttaca ttcccaatca accgcccggt tctgctgttt gtatcgaact ccaccgaatc
     1741 accagcgatg ttgaagtccg cgcgctcgat cgtggtgcgt gcttttgagc tcaagatgcg
     1801 cgttttcaaa tcaagcaccg acgtgctcat accgattttt agatccggct gatcctcggg
     1861 cgtgtaggtt gtaattttga gctgttcaaa gccgatgtgt tcctggtcga tccggtgcgc
     1921 cgtgcccgct tcgaattttc cccgcagatg cccatcgccg tcgaaatccg gcaaaacgag
     1981 gcccttagct tcgtggccga tcggcagcgg aatgttcgtt aggctttgct cgccgggaga
     2041 tgaactagac cctgccttcg cgcgaggctt tcctttgcgg cccttcgatt gagccaacgc
     2101 attcggcaac cctatcaaaa ttgatagaac ggcaaacaac aaacagatta atgtccagcg
     2161 gaggctcacc agaaccgccc gctgcttgga cctgagcttc gtgcccaaac gattgaggtc
     2221 aatcgcccct acctgaaacc acagcatgaa tagcctttaa catgcgaagg tgcttcggca
     2281 aatcgtttag ccggacctga ttcggcccat cggacaaagc gcgggccgga ttttcgtgta
     2341 cctccataaa gattccatca caccccgcag ccattgcggc cctggccagc accggggcta
     2401 atttcccgtc gcctgacgtc gaatcccccg ccccaccggg ccgctgcaca gaatgtgtcg
     2461 catcgaaaat gacgcgataa cctgcgtcac gcatccagta gagtgagcgc atgtcggcga
     2521 caaggttgtt atacccaaat gtggtgccgc gctcggtgaa gcagaattgt gggttaccga
     2581 aggcgatcag tttctcggcg atgtttcgca tatcccacgg cgcgaggaac tgaccttttt
     2641 ttacgttaat cgcacgacct gtttccgcag cggcacgcag cagatcggtt tgccggcaga
     2701 ggaacgccgg gatctgcaat atgtcgatct tctccccggc aatttcggct tcagtcacgg
     2761 aatggacatc ggttgtcacc ggaatcttca gctcgcgccc gatgtcaaag agaatatcgc
     2821 aaccttcgcg cacgccgatt ccccgaaacg atcggacaga agtacggttc gccttgtcgt
     2881 acgaggcttt gaaaatgaaa tcgacattct cagccgcgca cgcctgagca atcttcctcg
     2941 ccatccgcca ggcaaatttc tcggattcca taacgcacgg gccgagaatg aaggctgggt
     3001 ttttcccgcc gatcgtgacc ttgccaacgt gcaatggctt ccgtttcatt gaccgcctcc
     3061 attctcgcga ggcgggcgat tgaggtcaat cgccccttac cctgcatccc cgcgtggcac
     3121 aggtagcggc ggttcacctg aaccgcccgt cgatcgtcct cgctgaatta gatccacaat
     3181 ggcaaatggc agatacagca cgagaaaaaa tagcagtgcc actccgtgca tttgcaagag
     3241 atacagcggc cacgaatcgg agagaaaact caaaatcgaa aatgcctcag gtttgtgcag
     3301 aagaaatcca tagttaaagc cggtgagctt atcaacggcc agcgtgacca cgaaatagaa
     3361 ctccgaccac aaccatgcgc ggacaatgga catcggatat ggccgatagc ggcgagtcag
     3421 catcaggaaa accacgccga cgatgatgcc gcagtgcgag gtgaaaaaac tgatgaatcg
     3481 ccagtctgga aaaccgtagc gcaggttcgg cgtaagtacg gcttgcagcg tgccgccaat
     3541 cccccagaaa tacgcaacct cgaaccagcg ctggtgtcct gtccacattg ccacaatcac
     3601 gacgaccatg ccccagtcac acatttgcat cggcaacatc tgccgccaat ccaccacgcc
     3661 gcggctgcgg atgaaaacca ggtaagccag gtagttcaag atcagcaccg ctgacaacac
     3721 agcgatgatc acccgctcga tccgcagcga ttttgtgcgc cgcaccactg ccgcaagtgc
     3781 aaacggcagt acgattgtga taaaaatcac cgtcaggtgc ggcaaaccgt acggttgaaa
     3841 ttcaggcgcg tcactcatca caagatggat cggcttctac gaagacgatg gcaaataact
     3901 acgccgtcaa cggctgatat taccaccgcg ttcagagaac gcgatccacc tctagcggat
     3961 gatccacaga ttacacggaa tcacatcgct aacccaggca atattgctcg gcagtcgctg
     4021 aaccgtctcg cgacttttcg gaaa
//
LOCUS       DATDAJ010000310         2986 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1809947, whole genome shotgun sequence.
ACCESSION   DATDAJ010000310 DATDAJ010000000
VERSION     DATDAJ010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1809947"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(133..501)
                     /locus_tag="VIS53_07730"
     CDS             complement(133..501)
                     /locus_tag="VIS53_07730"
                     /inference="COORDINATES: protein motif:HMM:NF042735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5767711.1"
                     /translation="MTTEEVAKKVVELVRKQAWYEALELYDDNVVSVEAYSMGGGSPE
                     TRGKEGVRGKVDWWVNAMEVHSFDAHGPFVGHDRFVVQYDADVSDKKTKERRKMSEVG
                     VYTVENGKIVREEFLPSVSA"
     gene            complement(572..1021)
                     /locus_tag="VIS53_07735"
     CDS             complement(572..1021)
                     /locus_tag="VIS53_07735"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEY5767712.1"
                     /translation="MNEKTAEKTSLEIIRFINVPPARVYAAWTDPAQLKEWWGPEDVR
                     TRSLTADVRVGGKYRWDLTSPQGEEMTAFGEYRELIPGKKIVFTWKWDDDEAWQHRTS
                     IVTVEFSDRDGGTELFFKHDQLPSQESRDRHNEGWNSILDRLEKFLL"
     gene            complement(1018..1470)
                     /locus_tag="VIS53_07740"
     CDS             complement(1018..1470)
                     /locus_tag="VIS53_07740"
                     /inference="COORDINATES: protein motif:HMM:NF019928.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEY5767713.1"
                     /translation="MTKTNDLAEAIIVERTFDAPLGRVWTALTDVNEMRQWYFDLKEF
                     KPEIGCEFDFVVEHEGNTYHHLCKVTEVIPQKKIAYTWRYKGEPGNSLVGFELFPEGN
                     KTRLKLTHTGIETFPKTPAYARKNFEAGWTAIIGSELKQFVESSKAKP"
     gene            complement(1605..2468)
                     /locus_tag="VIS53_07745"
     CDS             complement(1605..2468)
                     /locus_tag="VIS53_07745"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 domain-containing protein"
                     /protein_id="HEY5767714.1"
                     /translation="MHREHRCPGDDMERGSHCAQNISQQKTTQTGKANKMKTTELELD
                     REVVSAKEWEAARQQLLVKEKELTRARDALAAERRRMPWLAVEKDYQFDGPQGKASLL
                     DLFGGRRQLIVYRAFFEPGVVGWPEHACVGCSMVADQVAHPAHLNARDTTLAFASRAP
                     QTEIERLKARMGWQFIPWYTITDGFDKDFGVDEWHGTNAFIRDGDRVFRTYFINNRGD
                     EQMGNTWNYLDITALGRHEEWEDSREGYPQTPPYEWWNWHDEYGNDEASAKVLEQINR
                     GRAAAAGGDTT"
     gene            complement(2483..2851)
                     /locus_tag="VIS53_07750"
     CDS             complement(2483..2851)
                     /locus_tag="VIS53_07750"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY5767715.1"
                     /translation="MVNQMVKYSSRTLDRTFAALADPTRRQILAHLAGGDRRVTDLAR
                     PHDMSLPAVSKHLRVLENAGLLRRRRYGRVHEMRLNAEPLKKAAQWVEDYRKFWEESL
                     DRLAAYLEKTNKAGGKKRKA"
BASE COUNT          555 a          884 c          760 g          787 t
ORIGIN      
        1 aacacccatc cgttgcgcga tcgacgaatc ttttgtgtgt ggatttcgct gcgtgatggc
       61 gatcggtgcc gcgcccgctt ttgcaagcgc ggtcacggtt gttgtttcga tccaacgcga
      121 gcgcggttga actcaggcgc taacgctcgg taaaaattct tcgcgaacaa tcttgccgtt
      181 ctcgacagtg taaacgccga cttcggacat tttcctgcgc tctttcgttt tcttgtccga
      241 aacgtcagcg tcgtattgta ccacgaatcg atcgtgaccg acgaaaggtc catgggcatc
      301 gaagctgtgg acttccatcg cgttgaccca ccaatcgact ttgccgcgca cgccttcctt
      361 gccgcgagtt tccggcgagc cgccgcccat actgtaagct tccacgctca caacgttgtc
      421 gtcgtaaagc tcgagcgctt cataccaggc ttgttttcga accaattcca ccactttttt
      481 tgcaacttct tcggtagtca tatttttcct ccgtttttta gacgatgcgt ttgtaccagc
      541 tccaagtagt ttgaagttca cagacatgcc cctacaacaa gaatttttca agccgatcga
      601 gaatgctgtt ccagccttca ttgtgacggt cgcgtgattc ttgactcggc aactggtcat
      661 gcttgaagaa cagctcggtg ccaccatcgc gatcggaaaa ttccactgtt acgatgctgg
      721 tccgatgctg ccacgcttcg tcgtcatccc atttccaggt aaagacaatc ttctttcccg
      781 ggatcaactc ccggtattcg ccgaacgcgg tcatctcctc cccttgcgga ctggtcaggt
      841 cccagcggta tttgccgcca acccgcacgt cggcggttag gctgcgggtg cgaacgtctt
      901 caggtcccca ccattctttt agttgagcgg gatcggtcca cgcagcgtaa acacgagcgg
      961 gcggcacgtt gatgaacctg atgatttcga gcgacgtttt ctctgcggtt ttctcgttca
     1021 tggtttcgct ttcgagcttt caacgaattg tttcagttcc gagccgataa tcgcagtcca
     1081 gccagcttcg aaattcttcc gcgcatatgc cggcgttttt ggaaacgttt cgattcccgt
     1141 gtgagtcagc ttcagtcgcg tcttgttacc ctcggggaat aattcaaacc cgacgagaga
     1201 atttcccggc tcccctttgt atcgccaggt gtaagcaatt ttcttttgcg gaattacttc
     1261 ggtgactttg caaaggtggt gataagtatt cccttcgtgc tcaaccacga aatcaaactc
     1321 acagccaatc tccggcttga attcctttag atcgaaatac cactgccgca tttcatttac
     1381 gtcggtaagc gctgtccaaa ctcttccgag cggagcatcg aaagtgcgct ccacgataat
     1441 cgcttcagct aaatcgtttg ttttagtcat aatgtttatt cactttgcat tcctatccag
     1501 ctccatcgtt tttgtttcct tccttcgact gttcttcatc gtccgttccg ttccgttcca
     1561 cgtttgatcg tctcccgccg ccgccacgcc tgcgacgtga gcgatcaggt ggtgtcgccg
     1621 cccgctgcgg ctgcgcggcc gcggttgatc tgttcgagga ctttggcgga ggcttcgtcg
     1681 ttgccgtact cgtcgtgcca gttccaccac tcgtacggcg gggtctgagg atacccctcc
     1741 cgcgagtcct cccactcctc atgacgcccg agggcagtga tatcgaggta gttccaagtg
     1801 ttccccatct gctcgtcacc gcggttgttg atgaagtagg tgcggaatac ccggtcgccg
     1861 tcgcgtatga acgcgttcgt gccgtgccac tcatccacgc cgaagtcctt gtcgaagccg
     1921 tccgtgatcg tgtaccaagg aatgaactgc cagcccattc gcgcctttag gcgctcgatc
     1981 tccgtctgcg gcgcgcgtga cgcgaacgcg agtgtggtat cgcgggcgtt cagatgagcg
     2041 gggtgagcga cctggtcggc caccatggag cagccgacgc atgcatgttc gggccagccg
     2101 actacgcccg gctcgaagaa cgcccgatag acgatcaatt gacgacggcc gccgaacaaa
     2161 tcgagcaggc ttgccttacc ctggggtccg tcaaactggt aatccttctc cacggccagc
     2221 cacggcatcc gccgacgctc ggcggctagc gcgtcacggg cccgagtcaa ctccttctct
     2281 ttcacgagaa gctgctgacg cgcagcctcc cactccttcg ctgataccac ttctcgatct
     2341 aattccagct ctgttgtttt cattttgttg gcttttcctg tttgggttgt cttttgctgc
     2401 gaaatgtttt gagcgcaatg gctaccccgc tccatgtcat cgccaggaca gcgatgttcg
     2461 cgatgcatag cggacacata agtcaggcct ttctcttttt gccgccggct ttgttcgttt
     2521 tctccaagta agccgccagc cgatcgagcg attcctccca gaactttcga taatcctcga
     2581 cccattgcgc ggcttttttt aatggctcgg cgtttagccg catttcatgg acgcgtccat
     2641 agcgccggcg ccgaagcagt ccggcatttt cgagaacccg cagatgtttt gaaaccgccg
     2701 gaagcgacat gtcgtgcggc cgggccaggt cggtaacgcg cctgtcgcct cccgccaggt
     2761 gcgccagaat ttgccggcgt gtgggatcgg ccagcgcggc aaacgtccga tccagtgttc
     2821 tcgaagaata tttaaccatc tggttaacca tttagcagga tcattggaac gtgcaaacat
     2881 ttttttacaa attgcggaag gtgatctcgg cgtgtttcgt cggattaccg attctcaagg
     2941 gaatcggcaa ctctgagtcg atgaggttcg ctcgagccgc tggccc
//
LOCUS       DATDAJ010000311         5016 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1816492, whole genome shotgun sequence.
ACCESSION   DATDAJ010000311 DATDAJ010000000
VERSION     DATDAJ010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5016
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1816492"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..981)
                     /locus_tag="VIS53_07755"
     CDS             complement(106..981)
                     /locus_tag="VIS53_07755"
                     /inference="COORDINATES: protein motif:HMM:TIGR00147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEY5767716.1"
                     /translation="MTDVVIILNPAAGNLETLRDWQQRVESLVGRWPIRITSHAGEAE
                     TLARRAVEEGFGRVVAAGGDGTVNHVVNGIAGSDAALGILPMGTVNVFAMELGLPAND
                     LDRCWEIIQAGNIRLVDLPSANGKYFVQLGGIGLDAQAVKETTLAFKRSLGPLSYLIS
                     AAHIAARQPPQLLIESEDAPVQEGSFVLVGNGRLYGGPFPFFKQAVVDDGLLDVVLFK
                     RLGFLEIIKYLHDVVFSSDIRVPEIEYFQTRQLRVSSEQDVPVELDGELAGNCPVDFQ
                     MHEKALPVLSPPASP"
     gene            1043..2659
                     /locus_tag="VIS53_07760"
     CDS             1043..2659
                     /locus_tag="VIS53_07760"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal region-containing protein"
                     /protein_id="HEY5767717.1"
                     /translation="MQKLRRLAVIALGALIGLGAVVLLGVNLYVQSQGAQGKIQQELT
                     RSLGVPLKIRSMSVTPWGGLELSGITIPQTVPVGPKDFLKARTFRLRVRFLSLFSRRL
                     VIKEVSLVAPRVVWPQNAQGKWRLPNARAARAETVPANRAPATPQAEPGIEIVQTKAT
                     AAVTTPASVPSSPKPTVKGEPAGREPKLAVSPEVRRVTVKDGDFAFLDQTGRLIASFT
                     GVDFRTNIRSEQALRGDAKVTRVSLRDRFFLDQLRSPIRYEPDVLELSKISARVAEGE
                     VNGYFAMQPETEDSPFTTSVSFHDVLADQLVENAGGAKGMVKGKLEGSFQASGKTSDP
                     EALIGQGEIFLRDGRVQQYRLLVLLGQILQIEELQELHLEQAEAKYHLRPGLVTIDEL
                     VLRSPNIRLTSSGTVAFDGTLQLNSQLAINDRIRGQLFKPIRDNFHRIDDPGYSAIEF
                     QVGGTVERPSTNLVEQVVGRDISSMLNSFFGGKKDRPKKKKKAVEDAAPATPEPSDAG
                     RAMTAVPSPSLPPEIALPEATATPSPVASP"
     gene            2656..3213
                     /gene="rsmD"
                     /locus_tag="VIS53_07765"
     CDS             2656..3213
                     /gene="rsmD"
                     /locus_tag="VIS53_07765"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:TIGR00095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEY5767718.1"
                     /translation="MRVIAGSAGGVRLAVPKRGVRPTMDRVKAAIFSSLGEAIIGARV
                     LDLFAGSGALGIEALSRGAASAIFVEDDRQSAEAIQKNLAKTKLKGRVRHQDVFDFLR
                     QRSNAEKFQIVFADPPYEVYGGESHTEKLVNSESLPQFLEPNGIFVLEKRPTDTLPET
                     KVWRVLRQKTYGATEVLFLEPIGDQ"
     gene            3210..4508
                     /locus_tag="VIS53_07770"
     CDS             3210..4508
                     /locus_tag="VIS53_07770"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEY5767719.1"
                     /translation="MIRFIYNLFWPLGLLIFLPGYFAKMIRRGGYREKFGQRLGIYDD
                     EVRNRLSNQRSTWLHAVSVGEVNIALKLANALRALELDLHCVLTTTTTTGFALARKTA
                     PSWIEVMYTPLDYWPIMRRAFSVICPARIVLVEAEVWPNLAAAAHTRRIPLALVNARL
                     SRRSEGRYRRFRFFVAPTFRLLDLVCVPERRDVERWTTLGVSRNRIHVTGSIKFDPDV
                     QTQSHTVATSLRDVLPDVSPDSLVLFGGSTHRGEEEILVRIFLRLREQFPSLRLFIAP
                     RHVERLQEIRSHLSALPLRVTLASEALTCSSADADCMLLDTTGELQRWYGIASVVFIG
                     KSLTAHGGQNPVEPILAGKPVVFGPHMENFATLAKTLVSNSAAMQVSDADSLERTVGE
                     LLRDSEARQRLVRNAHAALGEHKGATARAATLIHELKPKR"
     gene            4587..4659
                     /locus_tag="VIS53_07775"
     tRNA            4587..4659
                     /locus_tag="VIS53_07775"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4621..4623,aa:Glu,seq:ttc)
BASE COUNT         1128 a         1392 c         1411 g         1085 t
ORIGIN      
        1 cgatgtggct gctttttccc gaatccagcc gtcacggtga tccatcgcgc agaacatcac
       61 gcggttccgg acgaaaaacc aattgtcgca gtgctcagac taaagctatg gcgatgccgg
      121 aggcgacagc acaggaagag ctttttcgtg catttgaaag tcgaccggac aattaccggc
      181 taactcaccg tccagttcca cgggaacgtc ctgttcgctg cttacacgga gttgacgggt
      241 ctgaaagtat tcaatttcgg gaacacggat gtcggagctg aatacaacgt cgtggagata
      301 tttaatgatc tccagaaaac cgagccgctt gaacaggacc acatcaagta aaccatcatc
      361 gacaacagcc tgcttgaaaa atgggaaggg tccgccgtac agacgcccat tgccgacgag
      421 gacaaacgat ccttcctgca caggcgcgtc ctccgactcg attaaaagct gcggaggttg
      481 gcgcgctgcg atgtgcgctg cggaaataag ataactgagc gggccaaggc tgcgcttgaa
      541 agcgagagtg gtttctttaa ccgcttgcgc atcgagccca atgccaccga gttgcacgaa
      601 gtattttcca ttcgcgctcg gtagatcgac gagacgtata tttccggcct gaataatttc
      661 ccagcaacga tcgagatcgt tcgcgggcag accgagctcc atggcgaaaa cgttgaccgt
      721 gcccatcggg aggattccca gcgcagcatc gctcccggcg attccgttta ccacatgatt
      781 cacggttccg tcaccgccag ctgcaactac gcgtccgaaa ccttcctcga cggcacgtct
      841 cgcgagtgtt tccgcctcgc cagcatgcga ggtgatgcgg atcggccaac gtccgacgag
      901 tgattcgact cgctgctgcc agtctcgaag agtttcgaga tttcccgctg ctggattgag
      961 aatgataaca acgtcagtca ttaggaaaag tagtcggggc ctttggtctt tgcttcaaac
     1021 tggggctgcg taacatctga gggtgcaaaa attgcgccgg ctggcagtta tcgctctggg
     1081 agcattaatc ggactcggtg cagtggtttt gctcggcgtg aacctgtatg tgcaatcaca
     1141 gggggcacaa ggaaagattc agcaggaact gactcgcagc ctcggtgttc cgctcaaaat
     1201 tcgcagcatg agcgtgacgc cctggggcgg acttgaactt agcggcatca cgattccgca
     1261 aacggtaccg gtcgggccaa aagatttcct gaaggctaga acattccggc tgcgcgttcg
     1321 tttcctttcg ctcttttcgc ggcggctggt gatcaaggaa gtttcgctgg ttgctcccag
     1381 ggttgtgtgg ccgcagaacg cacaaggaaa gtggcgcctg cccaatgcgc gagcagcgcg
     1441 cgcagaaacc gttccggcaa atcgggctcc ggcgacgccg caggcagaac cagggataga
     1501 aattgttcaa acgaaagcaa ccgccgctgt gacgactcca gccagcgttc catcttcgcc
     1561 aaaaccgact gttaagggcg aaccagccgg acgcgaacca aaattggccg tctctccgga
     1621 agttcggcga gtaactgtga aggacggcga tttcgctttc ttggaccaaa ccggaaggct
     1681 cattgcgagt ttcacaggcg tggattttcg gacgaacatt cgtagcgagc aggcgctcag
     1741 gggagatgca aaggtcactc gggtttcatt gcgggaccgc ttttttctgg accaactccg
     1801 ctcaccgatt cgctacgagc ctgacgtcct cgagctctcg aaaatttctg ctcgtgtcgc
     1861 cgagggcgaa gtgaacggtt actttgcgat gcagccagag acggaggatt ccccctttac
     1921 tacgagcgta agctttcatg acgtgctcgc cgatcaactc gtcgaaaatg ccggcggtgc
     1981 gaagggaatg gtgaagggca agctggaagg aagttttcaa gcctccggaa aaactagcga
     2041 tccggaggcg cttattggac aaggcgaaat ttttcttcgc gacggccgcg tccaacaata
     2101 cagattgcta gtgttactcg gtcagatttt gcagatcgag gagctgcagg agcttcatct
     2161 ggagcaagcg gaggcaaaat atcacttgcg tccgggattg gtcactattg atgagctggt
     2221 tttacgttcc ccaaatattc gtctcacctc gtcgggtaca gttgcgtttg acgggacgct
     2281 gcaactgaat tcgcagctcg caatcaacga cagaattcgc ggtcaacttt tcaaaccgat
     2341 tcgcgacaac tttcaccgca tcgacgaccc gggctactca gccatcgaat ttcaggtcgg
     2401 cggcactgtt gagcggccca gcacaaattt agtggagcaa gtcgtcggcc gggacatcag
     2461 cagtatgctc aacagcttct tcggcggaaa aaaggatcga ccgaaaaaga aaaagaaggc
     2521 cgttgaagat gccgcgcctg caacgcctga gcctagcgat gcgggcaggg cgatgaccgc
     2581 tgtgccgtca ccctctttgc cgccggagat agcgcttcct gaagccactg cgacgccaag
     2641 tccggtcgcg tcgccatgag ggtgatcgcc ggcagcgccg gcggagtccg cctggcagtt
     2701 ccgaagcgcg gtgtccgccc gacaatggac cgcgtcaaag cggccatctt ttcgagcttg
     2761 ggtgaggcga ttatcggcgc gcgagtgctc gatcttttcg ctgggagcgg cgcgctcggg
     2821 atcgaagcgc tcagccgcgg ggcggcctcc gcaatatttg ttgaagatga ccgccaatcg
     2881 gcagaagcaa tccagaaaaa tctcgccaaa acaaaactaa aaggccgcgt tcgacaccag
     2941 gatgtttttg attttctacg tcaacgatcg aacgccgaga aatttcaaat cgtttttgcg
     3001 gatccgcctt atgaagtgta cggcggcgaa agccatactg agaagctcgt gaatagcgaa
     3061 agcttgccac aatttctgga gccgaacggc attttcgttt tggagaagag gcccaccgac
     3121 actctccctg aaacgaaggt ttggcgcgtg cttcggcaga aaacttacgg cgcaacagaa
     3181 gtgctgtttc tggagccgat cggggaccaa tgattcgctt catctataat ctgttttggc
     3241 cgctcggact cttgatcttt ttgccgggct atttcgccaa gatgattcgc cgcggtggtt
     3301 accgcgaaaa atttggccag cgattgggaa tttatgatga cgaggtgcgg aaccggcttt
     3361 cgaaccaacg ctcaacatgg ctgcacgctg tgagcgtagg cgaagtaaac attgctttga
     3421 aactcgcgaa cgcgttacgc gcactcgaac ttgatttgca ttgcgtgctg accacaacca
     3481 ccacgaccgg cttcgcgtta gcgcgcaaga ctgcgccgtc ttggatcgaa gtcatgtaca
     3541 cgccgctgga ttactggcct atcatgcgcc gtgcgttttc ggttatttgt cccgcgcgca
     3601 ttgttcttgt tgaagcggaa gtttggccca acctcgccgc cgcagcgcac acacgccgga
     3661 tccccctcgc gttggtcaat gcgcgattgt ctcggcgctc tgaaggacgt tatcgacgtt
     3721 ttcggttttt cgtcgcgcct acgttccggc tgctcgattt ggtgtgtgta ccagaacgtc
     3781 gggatgtcga gcggtggacg acgcttggcg tctcgcgaaa ccgaatacat gtgaccggta
     3841 gcatcaaatt cgatcctgac gttcagacac aaagccacac tgtagccacg tccctgcggg
     3901 acgtgctccc tgacgtcagc ccggattcac tcgtgctctt cggcggcagc acgcatcgcg
     3961 gcgaagaaga aatcctggtc agaatttttc ttcgattgcg cgagcaattt ccatcgctgc
     4021 ggttgttcat cgcgccgcgt catgttgaac gactgcaaga aatccgctcg cacttgagcg
     4081 ctttgccatt gcgcgtgacg ctcgccagcg aagcgctcac ctgcagctca gccgatgcgg
     4141 attgcatgct tctcgatacg actggtgaac ttcagcgctg gtacggcatc gccagcgtcg
     4201 tgttcatcgg gaaaagcctc accgctcacg gcggacaaaa tcctgtggaa ccgattctcg
     4261 cgggcaagcc ggtcgtgttt ggtccgcata tggaaaactt cgcaacgctt gctaaaacgc
     4321 tggtttcaaa tagtgccgca atgcaggtta gcgatgccga ctcgcttgag cgtaccgttg
     4381 gcgagcttct ccgcgacagc gaggcgcgtc agcgtctcgt acgaaacgca cacgctgcgt
     4441 taggcgaaca caaaggcgca accgcgcgcg ccgcgacgtt gatccacgag cttaaaccga
     4501 agcgttgaag attctcgctt tcggaaaatc tcaccggcga tttgccttgc accaaagcat
     4561 cgcaattccg atattacccg gcttttgacc ctatcgtcta gaggcccagg acaccgccct
     4621 ttcacggcgg taacacggga tcgaatcccg ttagggtcgc accgtttttc ataggtgact
     4681 tgcggtttct tcggactaac gcgagcgcag gcaaccgacc ttggcaggca ggcgaagata
     4741 ttcacggcaa gcggtcttac acacgttggc ggaaggtttt gggaccaact cgctactgcg
     4801 caatcgtcgt aaccccacag ccgcactgag gcagccgatc agtagcaaga gaaaaaatat
     4861 tgacctccga acgcgaacac gttcagttga acaggatgcg cttacggcag cttcacgacg
     4921 ctctggaaaa gcttaccaag gcgattcgtg aagtggatgc ggttgtcgaa accatgcgcc
     4981 gctgagcacg acccgctggc gtcccacatt tttctc
//
LOCUS       DATDAJ010000312         6408 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1819851, whole genome shotgun sequence.
ACCESSION   DATDAJ010000312 DATDAJ010000000
VERSION     DATDAJ010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6408
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1819851"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VIS53_07780"
     CDS             complement(<1..254)
                     /locus_tag="VIS53_07780"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY5767720.1"
                     /translation="MNGAAFIVISVFTLAAALAAATLPNLMHAAFCLVLALLGLASFF
                     FLLGAEFVGLALVFIYIGAVAVLIVFTILLTRRDPKEHHGL"
     gene            complement(251..1438)
                     /gene="nuoH"
                     /locus_tag="VIS53_07785"
     CDS             complement(251..1438)
                     /gene="nuoH"
                     /locus_tag="VIS53_07785"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF004741.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEY5767721.1"
                     /translation="MSSALDQIFVYGKRWLLSWIATAPNWIIQITSSLINIVALLAAF
                     LTLFALMSVLERKILGRMQNRYGPNRVGPFGLFQPVADGIKMLIKEDIVPARADKVVH
                     FLAPVVLAAVAILTLGVIPYGRNMTAFRIDGGILFFFAVGSATELAVFMAGWASNNKF
                     SMLGAMRAIAQMFSYELPLIITVLPVVMVVGSLMPDTIVFAQGEYTLGIVPRWFVFTP
                     WGAAAFLLFFVSGLVESNRTPFDVPEGESEIVAGHMTEYSGFKYATFFMAEYLGMFAV
                     SGLAVTLFLGGWHAPVRLLEFIPSYVWFFAKLSALLFVYIWLRATLPRMRVDQMMNVA
                     WKFMLPMAFTCVIAAAVWHYAGRGMRGWLWSLFVILVVYSALSILLDTRRKFARRVYR
                     FAE"
     gene            complement(1563..2024)
                     /locus_tag="VIS53_07790"
     CDS             complement(1563..2024)
                     /locus_tag="VIS53_07790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006984014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEY5767722.1"
                     /translation="MADGKSEKHHIFVLADTHNRLPESVKEMAKDADEIWHLGDVCAE
                     AILDELRAIGPRVTVVRGNCDSNLEWLLVLNLVRDGLKFRLQHVPPNHPPDDVDVLLH
                     GHTHVPRNERHGRVLFLNPGCVTRPNRGALSSVAWLKITDGKITWNLVPLR"
     gene            2253..4496
                     /locus_tag="VIS53_07795"
     CDS             2253..4496
                     /locus_tag="VIS53_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767723.1"
                     /translation="MRSLVFLLAGLLATAGLIYGEIKTPENAPIEITSTGQTTYENGL
                     ATARENVAIHIGDTDIYADYAQYNSSTHDVELRGHVRIYRDTSLYNADSGIYNTETKK
                     IRAISARTESQPYFVGGNDVTSIEGDNAYLIKGGVFTTHDSSKPDFRLRARKIRVYEN
                     DRVIFMNVTAYIGKVPVFWWPYLYQSLDNAFSFSISPAYYSTWGPSLLTQVTFPITDY
                     VQTRLRLDYFGRRGFGFGFEPTIEYGKDQTSVARIKTFYINDQNPEINQTDIPRTGVP
                     ESRYRYSLEDHTDFTDSIYGIANITKLSDQYVMQDFFQGEFRIDPVPDNVVALTKINP
                     FFTLTGIERFQANGFFTTTERQPEVVLDVKRHALFGGPIFYEGETGFANLRLEFPEDS
                     GIKNYGTQRFDTFHQLVFPNTYFGWLSFMPRVGYRGTYYGKTWDLGSTIFVPPSNPLV
                     PDTILPPPTTANPIKFAGDTFRSVFDTGAEASFKISRKWEDVQSRAFGLDGLMHVFQP
                     FTDFSYVKEDGPNPLSVLQFDRFEPSTQLRAIDFPQFTPIDSIADWTVWRMGVRNKLQ
                     TRRDDSTMTWLELDTYFDVNFENPYNRTDYSNLLNNLRFQPLPWMSFSVNSQVPAFAK
                     GFTEVNTVASVQPLANLQVNVGHRYLNGNPFFENSSLFVVGGYLRVNDNWGLAVQEQY
                     EGATDTLQEQRYAVYRDLTSWVASFGGVIRDNSGVKEYGLLFTVTLKAFPRFGFDLNF
                     DPSSSGE"
     gene            4582..5895
                     /locus_tag="VIS53_07800"
     CDS             4582..5895
                     /locus_tag="VIS53_07800"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEY5767724.1"
                     /translation="MDISIIGSGYVGLVTGACFADVGHHVICVDNDSEKVKQLKAGEI
                     PIYEPGLEEIVHRNVSAQRLHFTGNIQEAVERSQIIFIAVPTPPLPDGDVDLSFVEKV
                     AREIAGVLTDYRVIVDKSTVPVKTGDKVAESIKRYNRHGAKFDVVSNPEFLREGCAVA
                     DLMHPDRIVIGAQSEHAIDLMKKVYEPFMAPILVTDISSAELIKHCANSFLALKISYI
                     NAVSGICEASGADVEKVADGIGMDHRIGRDFLNAGIGYGGSCFPKDIAAFIAISEQLG
                     RPFTLLKEVQRINEGQKARFLKTIRETLWVLREKRIAVWGLTFKPDTDDLRSSVAIEV
                     VDQLLREGAHVVAYDPKGMQKARTIKAIADAEFASSALEAVTDAEALIIATDWNEFAN
                     VDLAVLKDKMRTPIVFDGRNLLDPETMRQFGFNYYSIGRAGVRPQ"
     gene            5902..>6408
                     /locus_tag="VIS53_07805"
     CDS             5902..>6408
                     /locus_tag="VIS53_07805"
                     /inference="COORDINATES: protein motif:HMM:NF013216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY5767725.1"
                     /translation="MARRSARQTALAALRLWRKEKRFADSIISGLLANADLTASDRAF
                     AMELFYGVLRNLTLLDFWIGCLRASHIEADVRDILRLGLYQFFLLKTPEHAAVHETVA
                     MASQKQRPIINAVLRTATRQRSELLEHADAQPLFVRTSHPQFLIERWQQRFGAEYTEE
                     LCKWNNRPA"
BASE COUNT         1568 a         1743 c         1724 g         1373 t
ORIGIN      
        1 agaccgtgat gttctttcgg atcgcggcgc gtcagaagaa tcgtgaaaac gatcaacacc
       61 gccactgcgc cgatgtaaat gaacaccagg gcaagcccta cgaactctgc gcccagcagg
      121 aaaaagaagg atgcgagccc gagcaatgcc agcaccaagc agaacgcggc atgcatgaga
      181 tttggcaacg tggcggcggc cagcgccgcg gcgagcgtga agacggaaat cacaatgaat
      241 gccgcgccgt tcattcagcg aaacggtaaa cacgccgcgc gaatttcctt cgcgtgtcca
      301 gcaggatcga tagcgcgctg taaacaacca agattacgaa caacgaccac agccagccgc
      361 gcataccgcg cccggcataa tgccagaccg ccgcggcaat gacgcacgtg aacgccatcg
      421 gcaacatgaa tttccaggcg acattcatca tttgatccac gcgcatgcgc gggagcgttg
      481 cccgcagcca gatgtaaacg aagagcagag cgctcagctt tgcgaaaaac caaacgtaag
      541 agggaataaa ttcaagcagg cgcacgggcg catgccagcc gccgaggaac aacgtcaccg
      601 ccagcccgct gacggcgaac atcccgagat actccgccat gaaaaacgtg gcgtacttaa
      661 atcctgaata ttcggtcatg tgtccggcga cgatttccga ttcgccctcc gggacatcga
      721 atggtgtgcg gttcgattcc acaagaccgg aaacaaaaaa cagaaggaag gcggcggcgc
      781 cccacggagt aaatacgaac cagcgcggca caatgccaag cgtgtattcg ccttgcgcga
      841 aaacaatcgt gtccggcata agtgagccca caaccatcac gaccggaagc accgtgatga
      901 tcagcggcaa ttcgtagctg aacatctggg cgatcgcgcg catggcgccg agcatggaaa
      961 atttgttgtt actcgcccag ccggccatga acactgcgag ttccgttgct gatcccacgg
     1021 cgaagaagaa gagaatgccg ccgtcaattc taaacgcggt catgtttcgg ccgtacggaa
     1081 tcacacccag cgttaggatc gccactgcgg caagcacgac tggagcgaga aaatggacga
     1141 ccttgtctgc acgcgccggc acgatgtcct ctttgattaa cattttaatt ccatctgcga
     1201 ccggctggaa aagaccgaac ggcccgacgc ggttcggccc gtaacgattt tgcattcgcc
     1261 ctaaaatttt ccgctccagc accgacataa gcgcgaagag cgtaagaaac gcggcgagca
     1321 acgcgacaat gttgatcagg ctggacgtga tttggatgat ccaattcggc gcggtggcaa
     1381 tccaggaaag cagccatcgt tttccgtaaa cgaagatttg atcgagagcc gaactcatct
     1441 tcgtgaagaa aagcgattgc cgccgattta atcaagagcg aatcacgagc aaggaacgac
     1501 ggtttcccaa ccgtcgtcat tccctcaacg gctaggaagc cgtcgttcct tggggatgca
     1561 cctcagcgga gcggaacgag attccaagtg atttttccgt ccgtgatttt aagccaggcc
     1621 acacttgaca gtgcaccgcg gttcggccga gtcacgcaac ccgggttgag aaacagaacg
     1681 cgaccgtgcc tttcgttgcg cgggacgtgc gtgtgcccgt gcaggagaac atcgacatca
     1741 tccggtggat gattcggcgg aacatgttgc aggcgaaact ttaacccgtc ccgcacaagg
     1801 ttgagaacca gcagccactc gagattgctg tcgcaatttc cgcgcacaac cgtgacccgt
     1861 ggtccgatcg cacgcaattc atcaagaatc gcttccgcgc aaacatctcc aagatgccag
     1921 atctcatcag cgtctttggc catctccttc acgctctccg gcagacggtt gtgcgtgtcc
     1981 gccagaacga agatatggtg cttttcggat tttccgtccg ccatgttgcg ctttaagcct
     2041 tcaacttgct aaagtccgga gaaatatagg cgaactacga attgctggag gataaaactg
     2101 gttaacagat aaactatgct tgtcgcgcat gactatattg ggcccagctc tagatgcccg
     2161 ccggtcatcg catgcttggc gtctgtttat ctcctgagct gagcggtttt agctttgcag
     2221 ggggactttg gtgcggtacg gtggcgttcg ccatgcgatc gctggttttc ttgctggccg
     2281 gcctgcttgc gactgccgga ttgatctacg gagaaataaa aactccggag aatgccccaa
     2341 ttgaaatcac gtcgaccggg caaaccacat atgaaaacgg cctggcgacc gctcgcgaaa
     2401 acgtcgcgat tcacatcggg gatacggaca tttacgccga ctacgcacag tacaattcct
     2461 ccacacatga tgtggagttg aggggtcacg tccgaattta tcgcgataca agcctataca
     2521 acgcggacag cggaatctac aacactgaaa cgaaaaagat ccgggcgatc agcgcacgga
     2581 cggagtcaca accttacttt gtgggcggga atgatgtgac ctcgatcgag ggggacaacg
     2641 cctaccttat caagggcggc gtcttcacga cacacgattc ctccaagccc gattttcgcc
     2701 tgcgcgcccg caagattcgt gtttacgaaa acgatcgcgt aatcttcatg aacgtcaccg
     2761 cctacatcgg gaaggtgccg gtgttttggt ggccgtatct ctaccaatcg ctcgacaatg
     2821 catttagttt ttccatctcg cccgcgtatt acagcacttg gggaccatcg ctcctcacac
     2881 aggtcacgtt cccgatcaca gactatgttc aaacccggct ccggctggat tatttcggca
     2941 ggcgggggtt cggctttggt tttgagccga caattgaata tgggaaagac caaaccagtg
     3001 tggcgcggat aaaaactttt tacatcaacg accaaaaccc ggagatcaat caaaccgaca
     3061 taccgcgaac gggtgttcct gaatcgcgat accggtacag cctcgaggac cacaccgatt
     3121 tcaccgactc tatctatggc atcgccaata tcaccaagct gagtgaccag tacgtgatgc
     3181 aggacttctt ccagggagaa tttcggattg atcccgttcc agacaatgtg gtagcgttga
     3241 caaagataaa cccgtttttc accctcaccg ggatcgagcg ttttcaggca aacggtttct
     3301 tcaccactac ggaacgtcaa ccggaagtgg tactcgacgt caaacggcac gcgctcttcg
     3361 gtgggccgat attttacgaa ggcgaaaccg gatttgccaa tttgcgccta gaattccctg
     3421 aggactcagg tatcaagaat tacggcacgc agcgcttcga cacgttccat caactggttt
     3481 ttcccaacac atattttgga tggctgtcgt ttatgccccg agttggatat cgaggcacgt
     3541 actacggcaa gacctgggat ctcggatcaa caatatttgt gccgccatca aaccccctgg
     3601 tgcccgacac catcctgccg ccaccgacaa cagccaatcc catcaaattt gccggggaca
     3661 cgtttcgaag cgtcttcgat acgggcgcgg aagcttcgtt caagatctct cgaaaatggg
     3721 aggatgtgca aagtcgtgct ttcggtttag acggattgat gcacgtgttc cagccgttta
     3781 ccgacttttc ctatgtgaag gaagacggtc caaatccact ttccgttctg caattcgatc
     3841 gatttgaacc ttctacgcag ctacgggcaa tcgattttcc acagttcacc ccgattgatt
     3901 cgattgccga ttggacagtc tggcgcatgg gtgtccggaa caagttgcaa accaggcggg
     3961 acgattcaac gatgacgtgg cttgaattgg atacgtattt tgatgtgaac ttcgagaacc
     4021 cgtataaccg cacggattac tcgaacctac tcaacaatct ccgcttccag ccgctcccgt
     4081 ggatgtcttt ttcggtaaac tcccaagtgc cggccttcgc gaagggtttt acggaagtta
     4141 atacagtggc gagcgttcaa cccctggcga atttgcaagt gaacgtcggg caccggtatc
     4201 tgaatgggaa cccgtttttc gagaatagca gcttgtttgt tgtaggcgga taccttcgtg
     4261 ttaacgacaa ctggggcctg gccgttcaag agcagtatga aggcgcgacc gatactctcc
     4321 aggaacagcg ttacgcggtt taccgggacc taacaagctg ggtggcctcg ttcggcggag
     4381 taatacgcga taactcggga gtgaaagagt acggtctcct tttcaccgta acactcaagg
     4441 cgttcccgag atttggtttc gatttaaact tcgatcctag ctcatcgggc gagtgatccg
     4501 aagtgcgcga ataacgccca aattgctggc ggaattccgg cacttgtgct ggggcggatt
     4561 cgcccacacc gttcctgatt catggatata tcaattatcg gctccggata cgtcggcctg
     4621 gtgacgggcg cctgtttcgc tgatgtcggc catcatgtca tttgcgtcga taacgactcc
     4681 gagaaagtga agcagctcaa agccggcgag ataccgatct acgaaccggg actggaagaa
     4741 atagttcacc gcaacgtctc agcgcagcga ctccatttca ccggcaacat tcaggaagct
     4801 gtcgagcgct cacaaattat tttcatcgca gtgccgactc cgccactgcc ggacggcgat
     4861 gtcgatctca gcttcgtgga gaaagttgcc cgggagatcg caggggtgtt gaccgattat
     4921 cgagtgatcg tcgataagag cacggtgcct gtgaagacag gggacaaagt ggcggaatca
     4981 ataaaacgat ataaccgcca cggcgcaaaa ttcgacgtag tcagtaatcc ggagtttttg
     5041 cgcgagggct gcgctgtagc cgatctcatg catccggacc gcatcgtcat cggagcacaa
     5101 agcgaacacg cgatcgattt gatgaaaaag gtgtatgagc ctttcatggc cccgatcctc
     5161 gtgaccgaca ttagtagtgc cgagcttatt aaacattgcg cgaattcatt tctggccttg
     5221 aaaatttcgt acatcaacgc ggtgtccggg atttgcgaag cgagcggagc cgatgtggaa
     5281 aaagtggctg atgggatcgg aatggaccac cgtatcgggc gcgattttct gaacgctgga
     5341 atcgggtatg gcggctcctg tttcccaaaa gacattgcgg cgttcatcgc catcagtgag
     5401 cagcttggaa ggccattcac tctgctcaaa gaagtacaac ggataaacga gggtcaaaag
     5461 gcgcgttttc tcaagaccat tcgcgagacg ctttgggtgt tgcgcgagaa gcgaatcgcg
     5521 gtctggggtt tgacgttcaa gccggatacc gacgatctac gctcatcggt tgcaatcgag
     5581 gtggtggacc agctcctgcg cgaaggagcg catgtggtcg cgtacgatcc gaaaggaatg
     5641 cagaaggcgc gcaccatcaa agcgatcgcc gatgcggaat ttgcctcgtc cgctttggaa
     5701 gcagtcactg atgccgaagc gctgatcatc gcgacggact ggaatgagtt tgcgaacgtg
     5761 gatcttgcgg tgttgaaaga caaaatgcgg acgccgatcg tcttcgacgg acgaaatctg
     5821 ctggatcctg agacgatgcg gcaattcgga ttcaattatt actctattgg acgcgcaggc
     5881 gtgaggccgc agtaacgaaa tatggcgcgg cgttctgctc gccaaaccgc gctagcggcc
     5941 ttgcggcttt ggcgaaaaga aaagcgcttc gcggattcca ttatctcagg gctccttgcc
     6001 aacgcagatc tcactgcgtc tgatcgcgcg tttgccatgg aactgttcta tggcgtttta
     6061 cgcaacttaa cgttgctgga tttttggatc ggttgtctgc gcgcttcgca catcgaggcc
     6121 gacgttcgcg acatcctgcg actgggcttg tatcaatttt tcctactcaa aacacctgag
     6181 cacgcagccg tgcacgagac cgttgccatg gcctcgcaaa agcagcgacc gattatcaat
     6241 gccgtcctcc gcaccgcgac caggcagcga agcgaactgc ttgaacacgc cgacgcgcaa
     6301 ccattgttcg ttcgaacatc tcatccgcaa tttctgatcg aacggtggca acaacgcttt
     6361 ggcgccgagt acaccgaaga gctctgcaaa tggaacaatc ggcctgcg
//
LOCUS       DATDAJ010000313         6202 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1831280, whole genome shotgun sequence.
ACCESSION   DATDAJ010000313 DATDAJ010000000
VERSION     DATDAJ010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6202
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831280"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1654
                     /locus_tag="VIS53_07810"
     CDS             <1..1654
                     /locus_tag="VIS53_07810"
                     /inference="COORDINATES: protein motif:HMM:NF012503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HEY5767726.1"
                     /translation="TPGWALATPLKRGVNERNAMEDRQQQSLGDTPSDEFRKQLHELA
                     DWIADFREHIEGLRVTPNDKPGAVREQLPKRGPEEGEPFERILGDVDNIIVPGMVHWS
                     HPMFLGYFGWTSTAPGILGEILTAPLNVNAMTWRTCPAATELETVVIDWLRQWVGLSD
                     EFEGVIYDTASVGIMHALAVAREEATREADNPVCPTDALENTQAGLPASRSVRKYGLI
                     GAGAPRLRIYTSDQAHSSAEKAAIALGVGEENVIRIPSDAQFRIDVNLLGQTIAEDRR
                     NGLQPMAVLATVGTTSTASVDPVRDIGNLCREAKIWLHIDAAYGGGFAMVPEYEWMRN
                     GWELADSIVINPHKTVFVPLDFSVLYMRDLERLRRVFSLVPEYLRGDTVEAEKNYMDY
                     GIQLGRRFRALKAWVIWRSLGRAGVVARLREQIRLVNLLADWIRDDDRFELSAQPSMG
                     VVCFRFIGRDGALGRPFSARPRHGEQAVVTLHQAVRPEEAKLDQLNSDIVDRINASGR
                     AYLTQTKLRGRTVIRIGLGNVLTTEEHLRKGWKIIQETASKV"
     gene            1765..3291
                     /locus_tag="VIS53_07815"
     CDS             1765..3291
                     /locus_tag="VIS53_07815"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEY5767727.1"
                     /translation="MMKLLRRHRDWLMIVIAILAIPFIFYFVQQPDYGAIGRDQFARI
                     YDRNVSMLEAQQSARLLNLAQALGMSDFIGTMTAGAGVDQNQAAVQFIVNLLVLRHEA
                     ERLGLRPSASEVAEVVRKLPAFQGDSGFDINKLNDLVQNGLAPLGLAEEHIEQLVRDQ
                     ICLSEIQKLLAAGVSLPKSELDENFQRGYDKLYVSVIRFRSADFDKDVKIGDEDVQKY
                     YEAHKAELKTDEKRKVEFVQLTLNEDEKKLSGKERIEALQKLADRATDFTQALLEKNA
                     DFKQAAAKFQLPVHETGEFSAAEPDPQLKGDPQLGAAAFKLSTQEPHSDAVQVADGFY
                     ILNLTGKTEARPLTAEEAKPKIVDALKKTRTRELMSTRGTEIVQQLREAKKSGQPLET
                     VIEKAGVKPEKLAAFSLIDEESEKSEGDEQKKQSPELLTIKDAVALLNPGDATDFVPS
                     GTDGLIAILEKREPLGDASAGEKKAAFEKRILENKERIVVVEWLRDRQQAAGLEFKKG
                     "
     gene            3395..3727
                     /locus_tag="VIS53_07820"
     CDS             3395..3727
                     /locus_tag="VIS53_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767728.1"
                     /translation="MATPDEIFDDASGDVAVGDLASAVEKYRRCVELDPDFFDGWHAL
                     GMALMKIGRFEEAIEAGKRAVKLRPNDQIGWTSLSLFYNRAGNIKEAEAAGTKAKILS
                     WGGKVAEE"
     gene            complement(3904..5997)
                     /locus_tag="VIS53_07825"
     CDS             complement(3904..5997)
                     /locus_tag="VIS53_07825"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF017464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13 family metallopeptidase"
                     /protein_id="HEY5767729.1"
                     /translation="MKNSESNYFVSKIMKSLITIITSVVCSLVAVVAAPQEQTEQNAP
                     PLDANHRDSSVKPGDDFFLFANGNWIKQTEIPPEYSRWGAFNELIERNNDALHTIAEK
                     ASQTQVDPKLAPETRKVGDYYASGMDEQAVEAARTTPLTEEFQKIDVMKDRQDVLKEI
                     AHLHSIGINAFFNFGSGQDAKDSNHDIAQAVQGGLGMPDRDYYTKQDADMKEKREKYI
                     AHVTKMLTLLGQPPEKAAEDAKKIMALETKLAEASRTRVELRDPIKNYNKMAVRQLQD
                     LTPDWKWSDYFNSIDLLEPGDVNVHQPEFFKAVNNLFKSTPLDDWKAYLRWNLISATA
                     PYLSKDFVDEDFDFNQRVLRGTQQNKPRWKRVVTSEDSDIGEALGKLYVGFYFPPEAK
                     ERALELVNNLKEALADRIKTLTWMDEPTKKEALKKLAAMNVKIGYPDKWLDYSLLEID
                     RGPFVMNTLRAEKFAADRDLQKIGKPVDRTDWGMTPPTVNAYYQPTMNEIVFPAGILR
                     PPFFYTNADDAVNYGAIGAVIGHEMTHGFDDQGRQFDGVGNLRDWWSKTSADEYNKRR
                     KAVVDQYSEYAPLPGQHVNGELTQGENIADIGGVKLAYAALQKALDKHPEERDKKIDD
                     LTPEQRFFLSFAAIWRSKIRDEDQKLRLTTDPHSPAQFRVNGPVANMPEFQKAFNVPD
                     GSAMVRPADKRVNIW"
BASE COUNT         1364 a         1619 c         1821 g         1398 t
ORIGIN      
        1 aacacctggc tgggcgcttg ccaccccgct aaagcggggt gttaatgaaa gaaacgcgat
       61 ggaagacagg caacaacaat cgctcggtga cacgccgtcg gacgaattcc gtaaacagtt
      121 gcatgaactc gcggattgga tcgcggattt tcgtgaacac atcgaaggac tgcgcgttac
      181 gcctaacgac aaacccggag ctgttcgtga gcagcttcca aagcgcggac ccgaagaagg
      241 tgaaccgttc gagagaattc tcggcgacgt cgataacatc atcgtcccgg gcatggtgca
      301 ctggagtcac ccgatgtttc tcggttactt cggctggact agcaccgcgc ctggaattct
      361 gggcgaaatt ctaaccgcgc cgctaaacgt gaatgcgatg acgtggcgca cgtgtcctgc
      421 tgccaccgag cttgaaacgg tcgtgatcga ctggctgcgg caatgggtcg gtttatctga
      481 cgaattcgaa ggcgtgattt acgacacagc gtcggttggg atcatgcacg cgcttgcagt
      541 cgcgcgcgaa gaagccacgc gtgaggcaga caatcctgtc tgccctactg acgcgctgga
      601 gaacacgcag gcaggattgc ctgcgtcacg ttcggtgcgc aaatacgggc tgatcggcgc
      661 gggcgcgccg cggcttcgca tttacacctc tgatcaggcc cacagctcgg ctgagaaagc
      721 ggccatcgcc cttggcgtgg gtgaggaaaa cgtgatccgc attccaagcg acgcccaatt
      781 ccgaatcgac gtaaatttgt taggccaaac tatcgcagaa gaccggcgga atggtcttca
      841 gccgatggca gtcctcgcca cggtggggac gacatccact gcaagcgtcg atcccgttcg
      901 cgacatcggc aacctttgcc gcgaagcaaa aatctggctg cacatcgacg ccgcttacgg
      961 tggtgggttc gccatggtgc cggagtacga atggatgagg aacggctggg agttggcgga
     1021 ttcgatcgtg atcaatccgc acaaaacagt ctttgtgcct ctggatttca gcgtgcttta
     1081 tatgcgcgac ctcgaacgat tgcggcgcgt gttcagcctt gtgccggaat atttgcgtgg
     1141 tgacacggtc gaggcggaga aaaactacat ggactacggg atccagctcg gccgaagatt
     1201 ccgagcgctc aaagcgtggg taatctggcg ctcgttaggc cgggccggcg ttgttgcccg
     1261 tttgcgcgaa caaattcgtc tggtgaacct gctcgccgat tggatcagag acgacgatcg
     1321 tttcgagtta tccgcgcaac ccagcatggg cgtggtgtgt tttcggttta ttggtaggga
     1381 cggagcgctg ggccgtccgt tttcggcgcg ccctcgccac ggcgagcaag ctgtggtcac
     1441 gctccaccag gccgtgcggc ctgaggaagc caagctcgac caattgaaca gcgacatcgt
     1501 agaccgaatc aacgcgtccg gacgcgcgta tctcacgcaa accaaattgc gcggccgaac
     1561 agtaataagg atcggcctcg gcaacgtgct aaccacagaa gaacatctgc gcaaggggtg
     1621 gaagatcatt caggaaacgg caagcaaagt gtagctgctt cggtgtgcga agtgcgacac
     1681 cgtgtatgtc ttcgacggcg ccgcccgcag ggcggcggct acagatttgc gactgagctt
     1741 cggcaccgct aatcttggtc cgctatgatg aagttactgc gcaggcaccg ggactggctc
     1801 atgatcgtga tcgcgatcct ggcgattccc ttcattttct attttgtgca acagccggat
     1861 tacggcgcga taggcagaga ccagtttgcg cgcatctatg atcgaaatgt ttcgatgctg
     1921 gaagcgcaac aatctgcacg gctcctcaat ctggcgcagg cccttggcat gtctgatttt
     1981 ataggaacaa tgacggcggg ggccggggta gaccagaatc aggcggcggt acaattcatc
     2041 gttaatctgc ttgtcctgcg acatgaagcg gaacggctgg gactacgccc gagtgcttcg
     2101 gaggttgctg aggtcgtgcg aaagctgccg gcttttcaag gcgattcggg cttcgacatt
     2161 aataagttga atgatcttgt gcagaacggt ttggcgccgc tcggtcttgc tgaagagcac
     2221 atcgagcaac tcgtgcgcga ccagatttgc ctgagcgaaa tccaaaagct tctggccgcc
     2281 ggcgtttcgc ttcccaagag cgagttggac gaaaattttc agcggggcta cgacaaactt
     2341 tatgtcagcg tgattcgatt tcgatccgcc gatttcgaca aggatgtcaa gattggcgac
     2401 gaagatgtgc agaaatatta cgaggcgcac aaggcggagc tgaaaaccga cgaaaaacgc
     2461 aaggtcgagt ttgtccaact gacactgaat gaggacgaga agaagttgtc gggcaaagaa
     2521 cggatcgagg cgttacagaa actggccgat cgcgcgaccg atttcacgca ggcgctgctg
     2581 gaaaagaacg cggattttaa gcaggcggcc gcgaaatttc aactgccagt gcacgagacc
     2641 ggtgaattca gtgctgcgga gcccgatccg cagctgaaag gggatccgca gcttggtgcc
     2701 gcggctttca agctgtcgac acaggagccg cacagcgatg ccgttcaggt agcggatgga
     2761 ttttacatct tgaatttaac cggcaagacc gaggcacggc ccctgacagc cgaagaagcg
     2821 aaaccgaaaa tcgtggacgc gctgaagaag acgcgaacac gcgagttgat gtcgactaga
     2881 ggtacggaga tcgtgcaaca actccgggaa gccaaaaaat ctggtcaacc gcttgaaacc
     2941 gtcatcgaaa aagccggcgt aaaacctgag aagctcgcgg cgttttcatt gatcgatgaa
     3001 gaatcggaaa aatctgaagg cgacgagcaa aaaaaacagt cgcctgagct tcttacgatt
     3061 aaagatgcgg tggcattgct gaatccgggc gacgcgaccg actttgtgcc atctggtacg
     3121 gatggtctta tagcgatttt ggaaaagcga gagcctctcg gggatgcgag tgccggggag
     3181 aaaaaggcag ccttcgaaaa gagaattctt gagaacaagg agcgtattgt tgttgtggaa
     3241 tggttgcgcg accggcagca agcggctggc ttggaattca agaaggggta ggattcacac
     3301 aagccccaca aaggaggtga agtagtggtt gggtttgaaa tttggatgtc ggtatttctt
     3361 tgtgaccatg gtgttcgtgg cgaagaacaa ataaatggca acacccgacg agatttttga
     3421 tgacgccagc ggcgatgttg ccgttggcga tttggccagc gcggtcgaga agtaccggcg
     3481 atgcgtggag cttgatcccg attttttcga tggctggcac gcgctcggga tggcgttgat
     3541 gaagatcggt cgattcgagg aagccatcga agccggcaaa agagcggtaa aattgcggcc
     3601 taacgatcag attggctgga caagtctttc gctgttctac aaccgcgccg ggaacatcaa
     3661 ggaagccgaa gccgccggca caaaagcgaa aattttgagc tggggcggca aagtggcgga
     3721 ggagtaaccg aaggactgtt tctgggtgag cggtacgaac cttcttgcgt gggcgtgctg
     3781 tcgttaacac cgcggcttca gcccggtgtt ttgtgttgta gaaaacgtta ccgctggacc
     3841 accgtgatga actgcggtgt taatgtgacg gcggcgtcga cacagacggt ctacaacgaa
     3901 ccattaccag atgttcaccc gtttgtccgc cggacgaacc atcgccgaac cgtcgggcac
     3961 gttgaatgcc ttttggaact ccggcatgtt cgccaccggg ccattcacgc gaaactgtgc
     4021 tggcgaatgc ggatcggtgg tgagccgcag cttttgatct tcgtcgcgaa tttttgagcg
     4081 ccagatcgcg gcgaatgaca ggaagaaacg ttgctccggt gtcaggtcgt cgatcttttt
     4141 gtcacgttcc tctggatgtt tgtcgagcgc cttctgcaat gcggcataag cgagcttcac
     4201 tcctccgata tccgcgatgt tttcgccttg tgtgagctcg ccattcacat gctggcccgg
     4261 tagcggcgca tactcggaat attgatcgac gactgctttg cggcgcttgt tgtattcgtc
     4321 cgccgatgtc ttggaccacc aatcgcgcag attgccaacc ccatcgaact gccgcccctg
     4381 atcatcgaag ccgtgtgtca tttcgtggcc aatgactgcg ccgatcgcgc catagttcac
     4441 cgcgtcgtcg gcattggtgt agaagaatgg cggccgcaaa atgccggccg gaaagacgat
     4501 ctcgttcatg gtcggttgat aatacgcatt tacggtcggc ggcgtcattc cccagtcggt
     4561 gcgatcgact ggcttgccga tcttttgcag gtcccgatcg gccgcaaatt tttcggcgcg
     4621 cagcgtgttc ataacgaatg ggccgcggtc gatctccagc aatgaataat caagccattt
     4681 atcaggataa ccgatcttga cattcatcgc ggcgagtttc ttgagcgctt ctttttttgt
     4741 cggctcatcc atccaagtca gcgttttgat tcggtcggcc agcgcttcct tcaaattgtt
     4801 cacgagttcg agtgcgcgct ctttcgcctc gggtgggaaa tagaagccga cgtacagctt
     4861 gccaagcgcc tcgccaatat cggagtcctc tgaagtgacc acacgtttcc agcgcggctt
     4921 gttctgctgg gtaccgcgca ggactcgctg attaaaatcg aaatcctcgt cgacgaaatc
     4981 cttggaaaga taaggcgcgg tcgcgctgat tagattccag cggaggtatg ccttccaatc
     5041 atccagcggt gtcgatttga acagattgtt caccgctttg aaaaactccg gttgatgcac
     5101 gttgacgtcc cccggctcga gcaggtcgat cgagttgaaa taatcgctcc acttccaatc
     5161 gggcgtcagg tcctgcagct gtcgcactgc catcttgtta taattcttga ttgggtcgcg
     5221 cagctccaca cgggtgcgcg atgcttcggc caatttggtt tccagcgcca tgatcttctt
     5281 agcgtcttcg gcagctttct ccggcggctg gcctaacaag gtcagcatct tcgtcacgtg
     5341 cgcgatatac ttctcgcgct tctctttcat atcggcatcc tgctttgtgt aataatctcg
     5401 atccggcatg ccgaggccgc cctgcaccgc ctgggcgatg tcgtgattgc tgtccttcgc
     5461 gtcctggccc gagccaaaat tgaagaatgc attgatgccg atgctgtgca ggtgcgcgat
     5521 ctccttcagc acatcctgtc gatctttcat tacgtcgatt ttctggaact cttccgtcag
     5581 cggtgttgtg cgcgcggctt cgaccgcctg ctcgtccatc ccgctcgcgt agtagtcacc
     5641 gactttccgt gtctccggcg caagcttcgg gtcgacctgg gtttgtgagg ccttctccgc
     5701 gatcgtgtgc aatgcgtcgt tattgcgctc gatcagttca ttgaacgcgc cccatcggga
     5761 atattcaggc gggatttctg tctgtttaat ccagttgcca ttggcgaaca ggaaaaaatc
     5821 gtcgcccggt tttactgatg agtccctgtg gttggcatcg aggggcggcg cgttttgttc
     5881 ggtctgttcc tggggcgccg caacaacggc gactaacgaa caaacaaccg aagtgataat
     5941 ggtgataagt gacttcatga ttttggaaac aaaataattg gattcggaat tcttcaatcc
     6001 ggattagacc tttagaacac aattccgttg aagcgcaggc cgcgaatctg ggtagcgcac
     6061 gcgtctcgcg tgttggtttg aaagcctggc cgtttgcttc gcatccgttg cagcggcgtc
     6121 gcgccgaaac aatctttcct tcaacttccg cccgcactga atcggacttg cgctgaaagg
     6181 aaagttcgcg atcgcgaaga cg
//
LOCUS       DATDAJ010000314         4664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1831542, whole genome shotgun sequence.
ACCESSION   DATDAJ010000314 DATDAJ010000000
VERSION     DATDAJ010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1831542"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1274)
                     /gene="gdhA"
                     /locus_tag="VIS53_07830"
     CDS             complement(<1..1274)
                     /gene="gdhA"
                     /locus_tag="VIS53_07830"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEY5767730.1"
                     /translation="MALIQEVLEIVKKRNRNEPEFLQAVTEVLESIRPVIDRSKKCRD
                     ARILERLVEPERMIQFRVPWIDDKGQIQVNRGFRVQMNSALGPYKGGLRFHPTVYAGI
                     IKFLAFEQVFKNSLTGLPMGGGKGGSDFDPKGKSDREVMRFCQSFMTELFRHVGPNTD
                     VPAGDIGVGGREIGYLFGQYKRLANEFTGVLTGKGLSWGGSLIRPEATGYGAVYFAQE
                     MLKTRNETIEGKVCTVSGAGNAAQYTVEKLLQCGAKPVSMSDSSGFIYDKNGIDEEKL
                     AFVMSIKNVRRGRINEYAKKFRGSKYVAGQRPWGIKCDCAFPCATENEITAEDAKKLV
                     NNGCYLVSEAANMPSVPAAVDLFLEKKILFGPGKAANAGGVATSGLEMSQNSMRLPWP
                     REEVDSRLRHIMSTIFKNSWDTAEEYGQPGNLV"
     gene            complement(1324..1398)
                     /locus_tag="VIS53_07835"
     tRNA            complement(1324..1398)
                     /locus_tag="VIS53_07835"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1364..1366),aa:Val,seq:cac)
     gene            1614..2066
                     /locus_tag="VIS53_07840"
     CDS             1614..2066
                     /locus_tag="VIS53_07840"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY5767731.1"
                     /translation="MSEHKVTLTWQRGDKPFEYQKYSRDHTWKFPGGHEMQASAAPAY
                     LGNQNLVDPEEAFVASLSSCHMLTFLAIACKKRLVLDEYVDEAVGVMEKNAEGRLAIT
                     RVTLRQRLKFSGEKQPTPQEIGEMNHGAHDQCFIANSVKTEVKVEQQT"
     gene            2170..3531
                     /locus_tag="VIS53_07845"
     CDS             2170..3531
                     /locus_tag="VIS53_07845"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HEY5767732.1"
                     /translation="MNAPTDAQRMEKIVSLCKRRGFIFQSSEIYGGLNGAWDYGPLGV
                     ELKRNLKNYWWRVMVHERGDVVGMDGAILTHPAVLRASGHVEGFSDPMIDCRTCKAHL
                     RADQLVEKKGVKQCPNCGGKDLTEARQFNLMFETHVGASAEESSVAYLRPETAQSIFV
                     QFKNVLEVSRKKLPFGIAQMGKAFRNEINPRNFTFRSREFEQMELEYFCRPEQGMELL
                     EYWKEERLKFYENIGLSRANLHLLNVPDEERAFYSKGTYDIEYDFPFGRQELEGVAYR
                     TDYDLSQHQKASGKSLEYFDEETKERFIPHVVEPSAGVDRTVLAMICEAYAEDQAPND
                     KGEMEGRTFLRFHPRMAPIKCAIFPLLRNKEPLVAKAKQILDLLRPHMFVFYDESGAI
                     GRRYRRQDEIGTPFCVTVDFETLGEKQSHLRDTVTLRERDSMKQERVKISDLLELLLL
                     RIE"
     gene            3540..3953
                     /locus_tag="VIS53_07850"
     CDS             3540..3953
                     /locus_tag="VIS53_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767733.1"
                     /translation="MDVEVFTLCDAATVDAAGKLNILGSFDSLSAASEPIVHMQCALA
                     LKLRFARIEEGQKRFRLAFVDSDGKAVMQPLDGTTEVRFQDQYSTSTVSMALGIQQLK
                     LPKFGEYSIDLAIDGRHEASIPLFVKPSISSNPLT"
     gene            3978..4355
                     /locus_tag="VIS53_07855"
     CDS             3978..4355
                     /locus_tag="VIS53_07855"
                     /inference="COORDINATES: protein motif:HMM:NF016152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEY5767734.1"
                     /translation="MDLAEFCEYCLTKPGASEETPFGPDVLVFKVGGKMFALAALDEV
                     PPTVNLKCDPDLALDLRDRYEQVRPGYHMNKKHWNTVEIEGGIPAVELRRMIDHSYEL
                     VVKSLPKAVRANQRRVLASRSRR"
     gene            4411..>4664
                     /locus_tag="VIS53_07860"
     CDS             4411..>4664
                     /locus_tag="VIS53_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0036297 - interstrand cross-link repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crosslink repair DNA glycosylase YcaQ family
                     protein"
                     /protein_id="HEY5767735.1"
                     /translation="MLITLDHLRRYAVARSLFKPTTLKGAFQRIGFVQADPIRAPARA
                     QDLILRQRAKDYHAGDLERLYSKLEIEEDFFVVYGFMRKA"
BASE COUNT         1109 a         1233 c         1251 g         1071 t
ORIGIN      
        1 acgagattgc cgggctgtcc gtactcttcc gcagtgtccc aggagttttt gaagatcgtc
       61 gacatgatgt ggcgcaatcg cgagtcgacc tcctcccgag gccatggtaa gcgcatggag
      121 ttttggctca tctcgagacc agaggtagca acgcctcccg catttgcggc tttgccgggg
      181 ccaaacagaa tttttttctc caggaacaga tcgaccgctg ccggcacgct gggcatgttg
      241 gccgcttcag agacaagata acaaccgtta ttgaccagtt tcttggcgtc ttcggctgtg
      301 atctcgttct ccgtcgcgca cggaaaagcg caatcgcatt ttatacccca aggccgctga
      361 ccggccacat atttggagcc gcggaacttt ttggcgtatt cgttaatgcg tccgcggcgc
      421 acgttcttaa tgctcatgac gaaggccagt ttttcctcat cgatgccgtt cttgtcataa
      481 atgaagccgc tggaatcgga catcgagaca ggctttgcgc cgcactggag taatttttcc
      541 acagtatatt gcgctgcgtt accagcgcct gagacagtgc aaactttgcc ttcaatggtt
      601 tcattgcgtg tcttaagcat ttcctgcgcg aaataaacag cgccgtaacc agtcgcctct
      661 gggcgtatca acgagccgcc ccagctcagt ccttttccgg ttagcacacc tgtgaattcg
      721 ttcgccaaac gtttatactg accaaagagg tatccgatct cacgccctcc cacaccgatg
      781 tcaccggcag gcacatcggt attcggaccg acgtgacgga acagttcagt catgaacgat
      841 tggcaaaatc gcatgacctc cctgtcggac ttccctttcg gatcgaagtc cgacccgcct
      901 ttcccgccgc ccatcggcaa accggttagc gagttcttaa agacttgttc gaatgcgaga
      961 aacttgatga tgcccgcata gacggtcgga tgaaaacgca acccgccttt gtaagggccg
     1021 agcgcgctat tcatttgcac gcgaaacccg cggttcacct ggatctgtcc tttgtcgtcg
     1081 atccacggga cgcgaaactg aatcattcgc tccggttcga ctaggcgctc cagaattcta
     1141 gcgtcccggc attttttact acgatcgatg acgggccgga tcgactccaa cacctccgtg
     1201 accgcctgaa gaaactcagg ctcgttacga ttacgctttt tgacgatttc gagaacttct
     1261 tgaatcaaag ccatggaatt tgtgactacg tgttgttacg ccgcgggtgg tgaacgaaaa
     1321 atctggtgcg cgatgctggt atcgaaccag cgaccccttg cgtgtgaagc aagtgctcta
     1381 ccactgagct aatcgcgcga cttatcagaa gcggacaaaa taaagagcgc gtcctgtaac
     1441 gcaagccttg cgacttgtcg ccgcggcgac cgctctgcca ctaagctaat cgcgctattt
     1501 ttcagaagcc ggcaggggcc ggatcgctta tgcgaaaagt ccgctgagga cagcgcattg
     1561 atgtgcgcaa ccgaagcgct tgccctgtga cacgtcgcgt cttatctaaa cgcatgtcag
     1621 aacacaaagt taccctcact tggcaacgcg gcgacaagcc gtttgagtat cagaaatatt
     1681 cacgagacca cacttggaag tttccgggcg gacacgagat gcaagcgtca gccgctcccg
     1741 cctatctcgg caatcagaac ctggtcgatc cggaggaagc gtttgtggct tcgctgtcga
     1801 gctgccatat gctgacgttt ctcgcgatcg cgtgcaaaaa gaggctcgtg ctcgacgaat
     1861 atgtcgatga agcagtcggc gttatggaga aaaatgctga aggaagactc gccattacac
     1921 gcgtcacact tcgacagcgg ctgaagttct ccggcgagaa acaacccacg ccgcaggaaa
     1981 tcggggagat gaatcatgga gcgcacgatc aatgcttcat cgccaactcg gtaaagaccg
     2041 aggtgaaagt cgaacagcaa acgtaattga ccgttctgtt gtagtggcgg ccgtgtcagc
     2101 cgccgaggga aaggcgtttg gcacaaacgc ctctacaacg ttttctgatc cgtgtaacct
     2161 gcgattacta tgaacgcgcc gaccgacgcc caacgcatgg aaaaaatcgt cagcctgtgt
     2221 aagcggcgtg gttttatttt ccagtccagc gaaatctacg gcggactcaa cggcgcctgg
     2281 gattacggtc cgctcggcgt cgaactgaag cgcaacctga agaactactg gtggcgcgtc
     2341 atggtgcatg agcgcggtga cgtagtcggc atggacggcg cgatcctaac gcatcctgcg
     2401 gttctcaggg cctcgggcca cgtcgaaggt ttctccgatc cgatgattga ttgccggacc
     2461 tgcaaggctc acttgcgcgc cgatcagctc gtggagaaaa aaggcgttaa gcaatgccca
     2521 aattgcggcg gcaaagactt aaccgaagcg cggcagttta atctgatgtt cgagacgcat
     2581 gttggcgcga gtgccgagga aagctccgtc gcatatctac ggccggaaac cgcgcaatcg
     2641 atcttcgttc agttcaaaaa cgttctcgaa gtgtcgcgca agaagttgcc gttcggtatc
     2701 gcgcaaatgg ggaaagcttt ccggaatgag atcaatcccc gcaatttcac atttcgttca
     2761 cgcgagttcg agcagatgga actggaatat ttttgccgac cggagcaggg aatggagctg
     2821 ctcgagtact ggaaagaaga gcgcctgaaa ttttatgaga atatcggcct ctcacgcgca
     2881 aacctgcacc tcctcaacgt gccggatgaa gagcgtgcgt tttattccaa aggcacttac
     2941 gacatcgaat acgatttccc gtttggccgc caggaactcg aaggtgtggc gtatcgcacc
     3001 gactatgatt tgtcgcagca tcagaaagcg agcggcaaat cgctcgagta tttcgacgag
     3061 gagacaaagg agagatttat cccgcacgtc gtcgagccga gtgccggcgt agatcgaact
     3121 gtgctcgcga tgatttgtga agcttatgca gaggaccagg cgcctaacga caagggcgaa
     3181 atggaaggac ggacgttttt gcggtttcat ccgcgcatgg ccccaattaa atgcgcgatc
     3241 tttccattgc tcaggaacaa ggagccgctg gtggctaagg caaagcagat tctcgatctt
     3301 ctccggcctc acatgtttgt tttctacgac gagagcgggg cgatcgggcg tcgttatcgc
     3361 cggcaggatg aaatcggaac accattttgc gttactgtag actttgaaac actcggcgaa
     3421 aaacaatctc atcttcgcga tactgtcact ttgcgcgaaa gagattccat gaagcaagag
     3481 cgcgtgaaga tttccgactt gctagagttg cttttactgc gaattgaata gtcgaactaa
     3541 tggatgttga ggtttttacg ttgtgcgacg cagctaccgt tgatgctgcc ggcaagctaa
     3601 acatcctcgg ttcctttgat agtctaagtg cagcgagtga accgatcgta cacatgcaat
     3661 gcgccttagc actcaaattg cgttttgcac gtattgaaga aggacagaaa aggtttcgcc
     3721 tcgcctttgt cgattcagac ggcaaggctg taatgcaacc actagatggt actaccgaag
     3781 tgcgcttcca agatcaatat tcgacaagca ccgtatcgat ggcgcttggt atccagcaat
     3841 tgaaattgcc gaaattcggc gagtattcga ttgatctcgc gatcgatgga cgacacgaag
     3901 cctcgatccc cctgttcgtt aaaccatcga tatcgtcgaa tccgctcaca tagcaattta
     3961 aaggtggcga agcgctgatg gatctcgccg agttttgcga atattgcctc accaaacccg
     4021 gtgcaagtga ggagacccca ttcggtcccg atgttcttgt gttcaaagtc ggcggaaaaa
     4081 tgttcgcgtt agcagctctg gatgaagttc cgcctacagt gaacttgaag tgcgatccgg
     4141 atttagcact cgacttgcgt gatcgctacg agcaggtcag gcccggttac cacatgaaca
     4201 agaaacattg gaatacggtt gagattgagg gcggcattcc ggctgttgaa ttgcgaagaa
     4261 tgatcgatca ctcgtacgag ctagtcgtca aaagtttgcc gaaagcggta cgagctaatc
     4321 agcggcgcgt actggcatct cgctcccgtc gatagtgttg gctgcaccaa acctcgctgc
     4381 gattgcgcag cgttcgtgta acggttcact gtgctgatca cgttggatca tttaaggcgc
     4441 tatgccgttg ctcgcagtct attcaagccg actacactga aaggcgcctt ccagcgcata
     4501 gggtttgtcc aagccgatcc gatccgggcg cccgcgcgtg ctcaagatct catactgcgc
     4561 caacgcgcga aagattacca cgccggcgat cttgaaaggc tctattcgaa gctggagatc
     4621 gaggaagact tcttcgtcgt gtacgggttc atgagaaagg caat
//
LOCUS       DATDAJ010000315         5896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1836055, whole genome shotgun sequence.
ACCESSION   DATDAJ010000315 DATDAJ010000000
VERSION     DATDAJ010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5896
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1836055"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..950)
                     /locus_tag="VIS53_07865"
     CDS             complement(<1..950)
                     /locus_tag="VIS53_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY5767736.1"
                     /translation="MTEKQLAEFFVEQHVLQPSQADDVLSEVELNGKTVAQAMIDGGF
                     IDEPSFYETIANGLGTEFLDLSQHEIAPEILRLIPSGLARLHGALPIDMSATTLRVAL
                     VDPFDLHVAEDLRFALGKDVQIVVSPPEQIEELIKQYYGTDTTSMEEVLKQLGEAGEA
                     LQLRETDGEAAVEAEANATPIIRFVDLILYQAIQDRASDIHFEPFENEFKIRYRVDGA
                     LYEMSPPPRHLALPVISRVKVMANMNIAERRLPQDGRIQKQIAGRSVDLRVSTLPTQF
                     GESLVLRVLDRSIINLDLEALGMPDYIYNFLLEIIERPNG"
     gene            complement(992..2695)
                     /locus_tag="VIS53_07870"
     CDS             complement(992..2695)
                     /locus_tag="VIS53_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspE/PulE family protein"
                     /protein_id="HEY5767737.1"
                     /translation="MQHNEEYVLGVLQDGGVLTRKQIDSARSRLNGEPGVIDVLINDG
                     ALSEVDVSRTLAAQAHMDWIDISTMIIPPQVIHEIRGEDARRFKVIPVAFGESGLVVA
                     VGNPLDIDTIDSLGFLLQRELELVCTSPKKIREALIKYYGTADEAADVLQREIGEDID
                     LGLEIGDGAEASPIDEADAPIVRLVSMLLIEAHRAGASDIHLEPLDKKFRVRFRIDGV
                     LQEMQSPPKRLQSAIISRLKIMTGSMSIAEKRLPQDGRIQVRIKKKPIDLRVSTMPTN
                     HGESMVLRILDKSSLKLGLPELGFLSDDQETFERLMRLADGILLVTGPTGSGKTTTLY
                     ACLNYINKPDRKIITVEEPIEYQMTGINQVQVNTEIGMTFPAALRSILRQAPNIIMIG
                     EIRDLETATIATNASLTGHLVFSTLHTNDAPSAVARLIDLGVQPFLVASSVRAVMAQR
                     LVRRLCSNCKQPGELTDTELRALGIEPGQLSEAQVMRPVGCELCRHIGYKGRMGIFEI
                     FEIDDEVRHMINKRTSTFILRQRARELGMRTLREDGVRKVLAGLTSAEEVISITVGDV
                     S"
     gene            complement(2793..3395)
                     /locus_tag="VIS53_07875"
     CDS             complement(2793..3395)
                     /locus_tag="VIS53_07875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767738.1"
                     /translation="MGSCDNMAEGGNARNGLLAVIDVDMATKGMGQASIIRIISAGCA
                     PVRAVETADGQHLFVAARGRNKKFPIEEGYQVLVFDVPTLLSNSPNNGFLGYGNSGGT
                     APVGMALFNNETMLAVANSNRFHANCECREHPEQCTANVAILDVSNPGSPTIQQVIPN
                     PNNPNSPDFPRNVTVGPDDSTLYVPNAGAMKLEVITTSVK"
     gene            4051..4200
                     /locus_tag="VIS53_07880"
     CDS             4051..4200
                     /locus_tag="VIS53_07880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767739.1"
                     /translation="MKFAGVPVGVDVGFGVTVGVGVPLPHGEFAGHGDMVGHGVVSPV
                     TETST"
     gene            4748..5095
                     /locus_tag="VIS53_07885"
     CDS             4748..5095
                     /locus_tag="VIS53_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016627252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEY5767740.1"
                     /translation="MNIQLKRAYEKPEHSDGIRILVDRLWPRGLTKDKAAIDLWLKNL
                     GPSTELRKWFGHDPKKWRGFCSRYRRELKQHGDDLRLIKRKAKEGTVTLIYGARDQEH
                     NEAVVLKQLLTLS"
     gene            5214..5672
                     /gene="rnk"
                     /locus_tag="VIS53_07890"
     CDS             5214..5672
                     /gene="rnk"
                     /locus_tag="VIS53_07890"
                     /inference="COORDINATES: protein motif:HMM:NF004396.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HEY5767741.1"
                     /translation="MMTMQVRRFSQDHDGIKNPIYVTSQDKQRLEELLMEIELSDPRK
                     HGDLKALTQELRRAVVVDPKDVFSDVITMNSRAEMRDLESGETDAFTLVFPSEANIDE
                     EKISVLAPIGAGMLGYRVGDEFEWNVPGGLRRMKVTKVEYQPEAAGDFDR"
BASE COUNT         1311 a         1613 c         1579 g         1393 t
ORIGIN      
        1 attccgttcg gtcgctcgat tatttcgagc agaaaattgt agatgtaatc gggcatgccg
       61 agcgcttcga gatccagatt gatgatgctg cgatccagta cgcgcagcac gaggctttcg
      121 ccgaattgcg tcggcaaggt tgaaactcgc agatcaacgc tgcgccccgc gatctgcttt
      181 tgaattcgac cgtcttgcgg cagccgtctt tcggcaatat tcatgttcgc catgactttc
      241 acgcgggaaa tcaccggcaa cgcgaggtgg cgcggcggtg gcgacatttc gtaaagcgct
      301 ccatcgacgc gatagcggat tttgaactca ttttcgaatg gctcgaagtg aatgtcgctc
      361 gcgcggtcct ggatcgcctg gtaaagaatg aggtcgacaa aacggatgat cggcgttgcg
      421 ttcgcctccg cttcaactgc tgcctcgccg tcagtctcgc gtaattgcag cgcttcaccg
      481 gcttcgccga gctgcttgag cacttcctcc atgcttgtcg tgtcggtgcc gtaatactgt
      541 ttaattagct cctcgatttg ctcaggcggc gacacgacta tctggacgtc tttgccaagt
      601 gcgaagcgca ggtcctcggc aacgtgcaga tcaaatggat cgaccagcgc cacccgtagc
      661 gtggttgcgc tcatgtcaat cggcagcgcg ccatgcaaac gcgccaggcc gctgggaatc
      721 aggcgtaaaa tctccggcgc aatttcgtgc tggctcagat cgaggaattc ggtgccaagg
      781 ccattggcaa tggtttcata aaagctcggc tcatcaatga acccaccatc gatcatggcc
      841 tgcgcgacgg ttttgccgtt caactctact tcgctcaaca catcgtccgc ctgcgaaggt
      901 tgcagcacat gctgctcgac aaagaattcg gcaagttgtt tttcggtcat ttaagcgatg
      961 taacaattca cgatttaacg aggtaacggc cttagctcac atcgcccacg gtgatggaga
     1021 tgacctcttc ggcagaagtc agaccggcca gcactttgcg cacgccgtct tcgcgtaatg
     1081 ttcgcatgcc aagttcgcgg gctcgttgcc gcaggataaa ggtcgaggtg cgcttgttga
     1141 tcatgtggcg cacttcatcg tcgatctcga aaatttcgaa tatgcccatt cggcccttgt
     1201 agccgatgtg acggcacagc tcgcagccga ctggcctcat gacctgggct tctgagagct
     1261 gtccaggctc gatcccaagc gcgcgcaact cggtgtcggt aagttcgccc ggttgtttgc
     1321 agttgctaca caaacgacga acaagtcttt gcgccatcac cgcgcggacc gaagacgcga
     1381 cgagaaacgg ttgcacgccg agatcgatca aacgcgcgac agccgaaggc gcgtcattcg
     1441 tgtgtagcgt actaaaaaca agatggcctg tgagactggc gttcgttgcg atggtcgccg
     1501 tctcgagatc gcgaatctcc ccgatcatga tgatgtttgg tgcctggcgc aggatagaac
     1561 gcagcgcggc cggaaacgtc atcccgatct cggtgttcac ctgcacctga ttgatgccgg
     1621 tcatctggta ctcgatcggt tcttcgacgg tgataatttt gcggtccggt ttgttgatgt
     1681 aattgaggca ggcgtaaagc gtggtcgttt ttcccgagcc ggtcggtccg gtcaccagaa
     1741 gaattccatc tgcgagcctc atcagacgct cgaatgtttc ctggtcgtca gacaaaaatc
     1801 caagctctgg caacccgagc ttcaggctcg acttatccag gatgcgcaaa accatgctct
     1861 ccccatgatt agtgggcatc gtcgagacgc gcaggtcgat gggtttcttt ttgattctta
     1921 cctgaattcg tccgtcctgc ggcaggcgtt tctccgcgat gctcatcgat ccggtcatga
     1981 tcttgagtcg gctgataatg gctgattgca gacgcttcgg cggcgattgc atttcctgca
     2041 gcacgccgtc gatccgaaat cggacacgaa attttttgtc cagcggttcg aggtgaatat
     2101 cgctcgcgcc ggcgcgatgc gcctcgatca gtagcatcga cacgagccgc acaatcggcg
     2161 cgtctgcctc atcgattggg ctcgcttccg cgccatcgcc gatttccaga ccaagatcga
     2221 tgtcctcgcc aatttccctt tgcagcacgt ccgccgcttc atcggcggtg ccgtagtatt
     2281 tgatcagcgc ttcgcgaatt ttctttggac tcgtgcaaac cagttccaac tcgcgttgca
     2341 ggaggaaacc caaactgtcg atggtatcga tgtctaacgg gttgccgact gcgacgacta
     2401 gcccgctttc accgaaggcg actgggatca ctttgaaccg ccgcgcgtct tcgccccgga
     2461 tctcatggat gacctgtggc ggaatgatca tcgtggagat atcgatccaa tccatgtgcg
     2521 cttgcgcagc gagcgtgcgc gagacgtcca cctccgacaa agcgccgtcg ttaatcaaaa
     2581 catcgatcac gccgggctcg ccgttcagac gcgagcgagc gctatcgatt tgcttgcggg
     2641 tgaggactcc tccgtcctgg agaactccga gcacatattc ttcgttgtgt tgcacctggg
     2701 gaaaagctgg gcccagttta gcgcaaagcg ggccttattt ccagcagtgc cgatccgacg
     2761 cgacaaaagt acgcccgaag cctgcgggga atctacttca cactcgttgt gatgacttca
     2821 agcttcattg cgcccgcatt tggcacatac agcgtagagt catccggccc aaccgttacg
     2881 ttgcgcggga agtcaggcga atttggatta tttggattcg gaataacttg ttggatggtc
     2941 ggtgacccgg ggttgctgac gtccaagatc gccacgttgg cagtgcattg ctctgggtgc
     3001 tcccggcact cgcaattagc atgaaaacgg ttggaatttg ccaccgccag catggtttca
     3061 ttgttaaata acgccatgcc gacaggcgcc gtaccaccgc tattgccata cccaaggaac
     3121 ccgttgtttg gcgaattcga cagcaaagtg gggacatcga aaaccaggac ttgatacccc
     3181 tcttctatcg gaaatttctt gtttctaccg cgtgccgcca cgaagaggtg ttgaccgtct
     3241 gcagtttcga ctgcccgaac gggcgcacat ccggcggaaa taatcctgat gatcgaagcc
     3301 tgtcccatcc cttttgttgc catgtcaacg tcgataactg ccagcagacc gttccttgcg
     3361 ttccctcctt ccgccatgtt atcgcagctt cccatggcac cgtctgggtg ttccctgcaa
     3421 cccgggcaca gaacattacc gtttgcggtt tgctccacat tggtcggatc gctatacttc
     3481 tgtccagtat ttggattcct gccctttgcc gacccttcgc atgctacata aaggtatctg
     3541 ccgtcatgcg acatagttat tcccgggata gtgttgccgc cgggtatgta tatggtgtgg
     3601 ttgtgccgga ttgaccgtgt cccggttgta aatccaccag cgttgcgtgc caccccgatg
     3661 acgcctactg tcccgccttc tatttcatcc gtaggtgtgg gactaggcat tagcccgtat
     3721 tcgttggcga caaatgcata gtgtccatcc ggtgtgacag ctacatcaaa agtaccgggt
     3781 ggagaattgg ggcaattaca gttgtctatc accgggtgtt gtcgaacccg gacagggccg
     3841 tccgcccgac atggttcatt caaactagcc agacggacaa attcagcgcc ctgcctttca
     3901 atcgccgcgc caacgctaag ttgcggcgga ccgggaaaaa attgtatccc gtcgatatgt
     3961 tgtacgggcg ggcgcgatgg aaaattaata atttgttggc cgccgcacgg gttactgaaa
     4021 tcagatgtgc tgaaaacctg aatacccgtg gtgaaatttg ccggcgtccc tgtcggagtg
     4081 gacgtcggtt tcggagtgac cgttggcgtc ggcgtccccc ttccgcacgg tgagtttgca
     4141 gggcacggtg acatggtggg gcatggtgta gtttccccgg ttaccgagac aagtacataa
     4201 tcgtccgtaa ccaaagcaga attgggggta ccgaatgtgt catagaattg cgcactcgct
     4261 gtcaccttga gcggcgcgga acgcggcgaa tcaccatatg aaatccctcc tgccccccaa
     4321 agaaaaagga ttaaagacga acccattagg aggaccgcca agagcaaacg cttcctgacg
     4381 aacccacgat caggtgacgc atcaattggc cagtttcccg gagcaatcgt taggtctgga
     4441 tttgtggatt tctttgcttt cacttttttg ttgagaataa attgcttagt ttgaagcaga
     4501 gatcacactc ggcgccacgc taatccgtta gttggtttcc acgagtagat cgtcaaggac
     4561 aggccgctta atttagggaa tcaaaacggc gacaactttg tcgagcctta tttacgcgag
     4621 cgccccgcaa ccctccggac gttctcccgg atcgaatctc gattccggtt tcaaaaagcg
     4681 gtcgcctttt catgagcgtg cctcatggtt catcaacaaa cgacgagcaa atcggaggca
     4741 ataacaaatg aacattcaac tcaagcgcgc ctacgagaaa ccagaacaca gcgatggcat
     4801 ccgcatcctc gttgatcgtc tttggccacg aggcctaacg aaagataaag ccgccatcga
     4861 cctttggctt aagaacctag gtccgagcac cgaactgcgg aaatggtttg ggcacgatcc
     4921 aaagaaatgg cgcggttttt gcagccgata ccgaagggag ttgaaacagc atggcgatga
     4981 tcttcggttg atcaaacgca aggctaaaga aggaaccgtc actctcattt acggtgcgcg
     5041 cgatcaggaa cacaacgaag ctgtcgtttt gaagcagctg ctaactttaa gctagaggtt
     5101 acgcatcttt gaacgacggg cttcgtgtcc ctgcaattcg ataatcaaag gctatcgtta
     5161 tgatcgtaca tcagtcttag tcaatcgccc gacgagatgt ttaactttcc ccgatgatga
     5221 ccatgcaagt tagacgattc agccaagatc atgatggaat caagaatccc atctatgtca
     5281 ccagccagga caaacagcgt ctcgaagagt tgcttatgga aatagagctt tccgatccgc
     5341 gcaagcatgg ggatctgaaa gccctgaccc aagagttgcg ccgagctgtc gtcgttgatc
     5401 cgaaagatgt ctttagtgac gtgatcacga tgaactcgcg tgcagagatg cgggatctcg
     5461 agagcggcga aactgatgcc ttcactcttg tttttccctc tgaagcaaat atcgacgaag
     5521 aaaagatttc tgtgctcgcc ccgatcggag cgggaatgct cggatatcgc gtcggcgacg
     5581 agttcgagtg gaatgtgccc ggcggattaa ggcgaatgaa ggtgacgaag gttgaatatc
     5641 agcccgaagc agccggagat ttcgatcgct gagcagattt caacgtggcg cggaacgctc
     5701 acgtgatccg gatatggcga tctccaaaaa gaatcccgtc attgaaccat ccaatgaacc
     5761 agccaacgct cacattcctt cttctagttt gcgcctgcga gcgcaaatct ccgtctgcaa
     5821 tggaatttcg ccatagcgct ccgccttttg ggcggtaaaa caaacagatg cccacctcga
     5881 ttcatccgaa cgtgcg
//
LOCUS       DATDAJ010000316         3413 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1840236, whole genome shotgun sequence.
ACCESSION   DATDAJ010000316 DATDAJ010000000
VERSION     DATDAJ010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1840236"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1276
                     /locus_tag="VIS53_07895"
     CDS             <1..1276
                     /locus_tag="VIS53_07895"
                     /inference="COORDINATES: protein motif:HMM:NF036494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5767742.1"
                     /translation="LVTADLVTNQNYVELERAESGEKTAANVRVIDYEANLALLEPAE
                     KSFLDGITPLEITSDTVVGDRLAAWQLEPTGALLATEGLVTTVQMMPYPIDVGNFLTY
                     RVSIPMQYRENSYTVPLVKKNKLAGLLLRYDSRSQLLDVIPAPVITHFLKEAEGQNYR
                     GFPSVGVSFFPTRDPALREFAAENGKRGVYITNVEAGTPANKAGMKEGDIVTAVGNHD
                     IDENGNYVDPLYGKIEFTNLLTAHAYAGDVVPFHVQRDGKPMQLNVTLEHRDAKDYVS
                     APYSLDQPPRYYVLGGLIFQELSRQYLKEWGPNWQREAPQRLVYMDHFQSELFPDRNR
                     RVVILSQVLPANSTIGYDDLAYLTVKKVNGKEIKSLDDLAEAVKQPVEEGFIKIETEE
                     DPKQIELDASQVAAEAPTLQENYGISSLQRLQ"
     gene            complement(1403..2434)
                     /locus_tag="VIS53_07900"
     CDS             complement(1403..2434)
                     /locus_tag="VIS53_07900"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEY5767743.1"
                     /translation="MAAQTTNQNVEPTSGPAQDGPIWGYHFVPNQPARSITSEAAVEF
                     LTAPGPSPPDEFLWLHFSLSNAASEPWLRRYLTLPDTFYESLHSDVDATHLEQDGDAL
                     VARIHDVLFDFTFDVPVATTTLCVKSRVLVSAHIRPWRSIDQLRAAVQTGQVFRSPIE
                     ILARLLRDQASVLVDIVRKTKTQVGPLEEQLLAKRVSVSRSELGSLRRMLVRLQRLLA
                     PEPAAFFRLLSRPPDWISQDELQNLQQAAEKFSTAISDTAALVERVKQLQEELAAFVN
                     EQTNRTLFVLTLVTVLALPINLVAGLFGMNVGGIPLNQHPYGFFLVLGPLLVLTAVLA
                     YLALGRRRY"
     gene            complement(2622..2771)
                     /locus_tag="VIS53_07905"
     CDS             complement(2622..2771)
                     /locus_tag="VIS53_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767744.1"
                     /translation="MRLRNGRVIEDVLIIGGIVTEVRGYDNIPFSADEISDIRVTHRK
                     WEFCR"
     gene            complement(2942..>3413)
                     /locus_tag="VIS53_07910"
     CDS             complement(2942..>3413)
                     /locus_tag="VIS53_07910"
                     /inference="COORDINATES: protein motif:HMM:NF015119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HEY5767745.1"
                     /translation="ENWGFVLEAIPHNRQALIGGVDWITKKWLLESFVQAEGLSWDDP
                     WLQSIDLEYHNIDPRRGLFFSITPGKRISDWNNGVRRASAMHMPPANTRASGRARAVN
                     FFQNCNFPYVINWDSIACDSRDFLVMGNPFETYNEEVDRFLSKPRTITNAAEQL"
BASE COUNT          827 a          933 c          927 g          726 t
ORIGIN      
        1 ccttgtcact gccgacttgg tcacaaacca aaattacgtc gagctcgagc gcgcagagtc
       61 tggcgaaaaa accgcggcaa atgtccgtgt aatcgattac gaagcgaacc tggcgctgct
      121 cgaaccggcc gagaaaagtt tcctcgacgg catcacgccg ctcgaaatca cgtccgacac
      181 agtcgttggc gaccggctcg cggcctggca actggaaccc acaggagcgc tgctggcaac
      241 cgaaggtctg gtgacaacgg tgcaaatgat gccctacccg atcgatgttg ggaatttcct
      301 cacgtaccgc gttagcattc ccatgcagta tcgcgagaac agctacacgg tgccgctggt
      361 caagaagaac aaactcgcag gattgctgct gcgttacgat tcgcgctcac aactgctcga
      421 tgttatcccg gcgccggtca tcacgcattt cttaaaggaa gccgaaggtc agaattatcg
      481 tggtttccct tcggtcggcg tctcattttt cccgacgcgg gatcccgcgc tgcgcgagtt
      541 cgcggctgaa aatggcaagc gtggcgttta cataaccaat gtggaggcgg gcacccctgc
      601 aaataaagca ggaatgaagg agggcgatat cgtgaccgcg gtcggaaatc acgacattga
      661 tgagaacggc aactacgtgg atccgcttta cggcaagatc gagttcacga atctgctgac
      721 agcgcacgcg tacgccggcg atgttgttcc tttccacgtt cagcgtgacg gcaagccgat
      781 gcagctgaac gtgaccttgg aacatcgcga cgcgaaagat tacgtgagtg cgccgtattc
      841 tctcgatcaa ccgccgcgct attacgttct tggcggcctt atttttcagg agttatcccg
      901 tcagtatctc aaagaatggg gaccgaactg gcaacgggaa gcgcctcagc gcctggttta
      961 catggatcat ttccaatccg agctttttcc ggacagaaat cgccgcgtgg tgattctcag
     1021 ccaggtgctt ccggccaata gcacaatcgg ctatgacgat cttgcctacc tcaccgtgaa
     1081 aaaggtgaac ggaaaagaaa tcaaatcgtt ggacgatctg gccgaagccg ttaagcaacc
     1141 agtcgaagaa ggcttcatca aaatcgagac cgaagaagat cccaagcaga tcgagctgga
     1201 cgcatcgcaa gtcgccgccg aagcccctac gcttcaggaa aactacggca tctcttcgct
     1261 gcaaagattg cagtgaacag tggaagggct tttctgtagc ggcggtctgc gtaccgccga
     1321 gggttcggca ctcagagggc gccgctacag ctcactgatc agtttgcaga tcgatgctgg
     1381 atcggcatca acatctcaaa aactagtatc gccgccttcc cagcgccaaa tacgccagga
     1441 cggctgtcaa gactaacaag gggcccaaga ccaaaaagaa accatacgga tgttgattca
     1501 gcgggatacc gcccacgttc atgccaaaca agccagccac caagttgatc ggcaaggcca
     1561 gcacagttac taacgtcaac acgaacagcg tgcgattggt ctgttcattg acaaaggcgg
     1621 ccaattcttc ctgaagctgt ttgacgcgct caaccagggc cgctgtgtcg ctgatggcgg
     1681 tggaaaactt ctctgcggct tgttgcagat tctgaagttc gtcttgcgaa atccagtcag
     1741 gaggccgact gagaaggcga aagaatgcag ctggttccgg ggccaaaagc cgttggagtc
     1801 gaaccaacat ccgccgcaga gaacctaatt cgctacgact gacagaaacg cgcttggcca
     1861 acagttgctc ttccaatggg cccacctgcg ttttggtctt ccgcacaatg tcaaccaaca
     1921 cactggcctg atctcgcaat aaacgcgcca gaatttcaat cggcgaacga aagacttggc
     1981 ccgtttgcac cgcagcccgg agttgatcaa tcgagcgcca gggccggata tgcgcgctta
     2041 ccagcacgcg cgactttacg caaagagtgg tggtcgcaac tgggacgtca aatgtgaaat
     2101 cgaaaagcac atcatggata cgcgccacca gcgcgtctcc gtcctgctcc aaatgagtgg
     2161 cgtctacatc gctatgcaac gattcgtaaa aggtatcggg caaggtcaga taccgccgta
     2221 gccatggctc agaagccgca ttggaaagcg aaaaatgcaa ccacaggaat tcatccggtg
     2281 gggacggacc cggcgcagtc aaaaactcaa ccgccgcctc cgaagtgatt gaccgtgctg
     2341 gttggttggg gacaaaatga taaccccaga tcggcccatc ctgcgctgga ccggacgtcg
     2401 gttcaacatt ttggttcgtt gtttgagcag ccatcagatc attggtcagc tggtttccac
     2461 cggtcgaacc cgcctaacga gactcaagat cagcgcccgc gcgaatcaga actgacggtc
     2521 gcaatctctc gaagctaggc ataaggacgg tccacagttc gctgcatcca cgtggttacg
     2581 cggttgggat gaatagcagg tgtgtgtagt agtaaaatcc ttcatcggca aaactcccat
     2641 tttcggtgtg taactctgat atcagaaatc tcgtcggctg aaaatggaat gttgtcgtag
     2701 ccacgaactt ctgtgacaat gccgccgata atgaggacgt cttcgatgac gcgaccattg
     2761 cgcaatctca ctgacgcggt ctggtagtcc atgcctgtct cgggctgact cactaggcga
     2821 ggcgcccact cgtctggtag cttgagatgc gtgctcaatc gtgacgcgat acttacggcc
     2881 taactatgat caggcgaaaa ttcgtaacac atcgcgaatt atttttcgtc taacgcggcc
     2941 gttacagctg ttctgccgcg ttggttattg tccggggctt tgaaaggaaa cggtcaactt
     3001 cctcgttgta cgtctcgaag ggattaccca ttacgagaaa atcgcggctg tcgcaggcga
     3061 tcgagtccca gttgatcaca taggggaaat tacagttctg gaaaaagtta acggcacgag
     3121 cgcggcctga tgcgcgcgtg ttggccggag gcatgtgcat cgcgctggca cggcgaaccc
     3181 cgttgttcca gtctgagatt cgtttgccag gtgtgatgct gaagaataat ccgcggcgcg
     3241 gatcgatgtt gtgatattcg aggtcgatgc tttgcagcca tggatcgtcc cagctcagtc
     3301 cttcggcttg gacaaaactt tccagtaacc atttcttggt gatccagtca acgccgccga
     3361 tcagcgcctg ccggttgtgc ggaattgctt cgagcacgaa gccccagttt tcc
//
LOCUS       DATDAJ010000317         2334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1848338, whole genome shotgun sequence.
ACCESSION   DATDAJ010000317 DATDAJ010000000
VERSION     DATDAJ010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1848338"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1614
                     /locus_tag="VIS53_07915"
     CDS             <1..1614
                     /locus_tag="VIS53_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767746.1"
                     /translation="KENAYFADGIQDDLLTNLSKIGDLKVISRTSVMPYRAMQSNARE
                     IGKALGVGTILEGSVRRIGNRVRVNVQLINVENDQHIWAEDYDRELTDVFAIQSDLAQ
                     KIAGELRAKLSPAEKAQIERKPTENTEAYLAFVEGHDLLTRPDRLRTDTENAEQLFER
                     ATRLDPNFAGAFAALAWVEDWMYHTFDPTPARKAKARTAAEEALRLQPDLPEAHLALG
                     FYHYYCERNYQRALEEFAIARKSLPNSADVYLAIGAIQRRQGKWAESTANMEKAASLS
                     PKDVILLINLADNYRATDDFERADRLFDRAIEAAPNSVGPRLGKAMLAADLKGDLSEI
                     DTQLVQVESRTQSDAENTFYQAYLLMLQRKFEQALAVLKQLPDNVRGDEKPKEYLEGA
                     LYTFLNDKQRAHSAFQRARPILEKAIQQGFDDASRHMTLGMVLAGLGEKDAAIAEGKR
                     AVALLPESQDALDGPKMTLMLAQIYAWTGENDAALELLERSLITPAGVTVSSLKLNPI
                     WDPLRADARFQALIDIAQKPNIELSMNCR"
     gene            1727..>2334
                     /locus_tag="VIS53_07920"
     CDS             1727..>2334
                     /locus_tag="VIS53_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767747.1"
                     /translation="MTGFFEEVKRRKVYRVAAAYIIAAGGIIQLASATFPAWELPSWA
                     LRLVILLVLVGFPIALILAWAFDITAQGIRATPDTAAPRMRRRRNIIMLIATGVVISA
                     ATGFFLLPRVAAHKVDKSIAVLPFENLSDEKENAYFADGVQDDVLTNLSKISDLRVIS
                     RTSVMQYRGRPTNLREIGKALGVSNILEGSVRRSGNRVRMNV"
BASE COUNT          548 a          611 c          660 g          515 t
ORIGIN      
        1 aaggaaaacg cctatttcgc ggacggcatt caggatgatc tgctcacgaa cttgtcgaaa
       61 atcggcgatc tgaaggtgat ttcgcgcaca tcggttatgc cttatcgcgc catgcagtct
      121 aatgctcgcg agattggaaa ggcccttggc gtcggcacca ttttggaagg gagtgttcgc
      181 cggatcggga atcgggtgcg cgtgaatgtg caattaatca atgttgagaa cgaccagcac
      241 atctgggcgg aagactacga tcgggagctg acggacgtgt tcgccatcca aagtgatctt
      301 gctcaaaaaa tcgccggcga gctacgcgcc aaattgtcgc ccgccgaaaa agcgcagatt
      361 gaacgcaagc cgactgagaa caccgaagct tatctcgctt ttgtggaggg gcacgatctg
      421 cttacgcgtc cggatagatt gcgcaccgac accgaaaacg ctgagcagct ctttgagaga
      481 gcgaccaggc tcgatccaaa ttttgccggg gcctttgcag ccttagcgtg ggtcgaagac
      541 tggatgtatc acactttcga tccgactccc gcgcggaaag caaaagcgcg cactgcagcc
      601 gaagaagcgc ttcgactaca gccagacctg ccggaggcgc acctggcatt gggcttttac
      661 cattattatt gcgagcgcaa ttaccagcgc gctttggaag aattcgcgat cgccaggaaa
      721 agtttgccaa attctgcgga cgtttatctg gcgataggag cgatccagcg tcgccagggc
      781 aaatgggccg aatccactgc caatatggag aaggcggctt cgctgagtcc gaaagacgta
      841 attcttctca tcaatctggc tgacaattat cgtgcgactg atgacttcga aagggcggac
      901 agacttttcg accgcgctat tgaagctgcg ccgaactcag ttggcccgcg tctaggcaag
      961 gcaatgctgg ccgcggattt gaaaggcgat ctatccgaga tcgacacaca attggtgcag
     1021 gtggaatcac gcacgcagtc ggacgcagag aatacttttt accaggcgta tctcttgatg
     1081 ctgcagcgaa aattcgagca agccctggca gttctaaaac aattacctga caacgttcgc
     1141 ggcgatgaga agccaaaaga atatctcgag ggagctcttt atactttctt gaatgataag
     1201 cagcgtgcgc attctgcatt tcaacgcgct cgtccgattc tcgagaaagc gatacaacaa
     1261 ggcttcgacg atgcgtcgcg ccacatgacc ctcgggatgg tacttgccgg tctgggtgaa
     1321 aaggatgcgg ccatcgcaga agggaaacgc gccgtcgcgc tccttcccga atctcaggac
     1381 gccttggatg ggccaaagat gacgctcatg ctggcacaaa tttacgcctg gacgggcgaa
     1441 aacgacgcgg ctcttgaact tcttgaacgc tcattgataa ctccggccgg agtcacggtc
     1501 tcgtcactga aactgaaccc aatttgggat ccgctccgag ccgatgctcg ttttcaggcc
     1561 ttaatcgaca tcgcgcaaaa gcccaacatc gaattgtcga tgaattgccg gtgacgagcg
     1621 attccgcttt tgggagggcg caatcgaatg gttaaagtga atgtcgggct tcgatttgtg
     1681 tctatagtca gggcagcact atagttccac gaatcaaaat cttcttatga ccggcttctt
     1741 cgaggaggta aaacgtcgca aggtttatcg agtggcggcg gcctacatca ttgctgccgg
     1801 cggcattatc caactggctt cggcgacctt cccggcatgg gaactgccaa gttgggcgct
     1861 gcgcctggtg attctgctgg tgctcgtcgg atttccaatc gctctgattc ttgcgtgggc
     1921 gttcgacatc acggcgcaag ggattcgggc gacgcctgac acagccgcgc cgagaatgcg
     1981 ccgtcgccgt aacataatca tgctgattgc aaccggcgtg gtcatttccg cggccacagg
     2041 cttcttcctc ttgcctcgcg tcgctgcgca taaggtcgat aagtcaattg ccgttttgcc
     2101 atttgaaaat ctgagcgatg aaaaagaaaa cgcctatttc gcggacggcg tgcaggatga
     2161 cgtgcttacc aacctgtcga agatcagcga tctccgggtg atttcgcgca cgtcggtgat
     2221 gcaatatcga gggcggccga cgaaccttcg tgaaatcggt aaggcgctcg gtgtttccaa
     2281 cattcttgag ggaagtgtac gccgctcggg aaaccgggtg cgcatgaacg tgca
//
LOCUS       DATDAJ010000318         6882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1854173, whole genome shotgun sequence.
ACCESSION   DATDAJ010000318 DATDAJ010000000
VERSION     DATDAJ010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6882
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1854173"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1071
                     /locus_tag="VIS53_07925"
     CDS             <1..1071
                     /locus_tag="VIS53_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEY5767748.1"
                     /translation="NIVRWEMRTRLFLRTTEFLWQEGHTVHETEAEAREETKRMLGVY
                     ETFVRERCAIPVFSGLKSDSEKFPGAVETMALEAMVQDRKAIQAGTSHFLGQNFARAS
                     GIQFQTREGKQEFGWTTSWGMTTRMVGTVVMAHGDDDGVVLPPRIAPTHVVILPITTR
                     EETRANVLETCDRLAAELRTKKFLDDIAIEAEVDRRDLGGGVKNWEWIKKGVPLRVEI
                     GPRDLEKNSVTVSRRDQPVKNKESMPMDEFAARVPEILVSIQASLYARAKEFQDANTH
                     VINSKKDFYDFFTAKNPSKPEIHGGFALAHWNGSREIEEQIKNDLKVTIRVIPVDDSP
                     EPGQCVFTGEPSARRVVWAKSY"
     gene            1146..1391
                     /locus_tag="VIS53_07930"
     CDS             1146..1391
                     /locus_tag="VIS53_07930"
                     /inference="COORDINATES: protein motif:HMM:NF012675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HEY5767749.1"
                     /translation="MQLKLYSREWCSWCIDAKDYLSEKGYCFQEIDVGKDRQAYEEMK
                     QLSAQTYVPTFVADDKVLANFDTNQLQKFLNEHQINP"
     gene            1407..2222
                     /locus_tag="VIS53_07935"
     CDS             1407..2222
                     /locus_tag="VIS53_07935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767750.1"
                     /translation="MLFGLLLTLGVAVLSVGLRTFHNSYAQKAGALGILAATFLGFYF
                     ATNNWVWGLVAALAWLFLPWLEILTRIRALRLPKEKQLRPKSPPSSDTFPALSEITRE
                     IEDEGFIYVSDAGWDWEDYRQFFRLFYREEDRAQAAICLNEQRDFSFYYLRISSRTKD
                     GAVWTTWNYPLSYGLKLSPAFRINRQRPDRSFWQLDQSHREFLRRNKVDPAEIEPLDE
                     EQIQADIEKDLRDQIAHNIHKGVLKQTAAGDVKYSWRGMIYLWCQFLVDLVRL"
     gene            2449..3066
                     /gene="lexA"
                     /locus_tag="VIS53_07940"
     CDS             2449..3066
                     /gene="lexA"
                     /locus_tag="VIS53_07940"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY5767751.1"
                     /translation="MLTDRQRSVLDFIQREQREKGVTPSTREIQNHFRFASQTSVMQY
                     IAALERKGFLSRHARKARALITPAMKVRITDIPIYGQIPAGMSALTEQSIEGHVSLDT
                     RSANVLKNRGTFALRVRGDSMIGAHIVDGDIVILEDTKEVHDGDIVAALIDGETSLKR
                     YVVERGRPYLKAENPRYPDLVPARELKIQGVMVSLIRKQERRKKH"
     gene            3138..3797
                     /locus_tag="VIS53_07945"
     CDS             3138..3797
                     /locus_tag="VIS53_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767752.1"
                     /translation="MAASAKIIDLRNLLAERFPHPSCTTTKCLITGLPFLDESIGGGL
                     PRGAITELISPGTSAGSASLIHALIHCAYRDNYFLALIDGRDSFDPCGLNNAWLQHLL
                     WVRCSKASEAVKAADLLLRDGNFPLVIVDLMLNVPEELRKIPQTNWYRLQRLVGALPT
                     ACLVLTRYEMVSSAQLKLVLENSWDIQTFESEDAFSRLRIVMKRSHLQSEVRSQQSAV
                     N"
     gene            3802..4323
                     /locus_tag="VIS53_07950"
     CDS             3802..4323
                     /locus_tag="VIS53_07950"
                     /inference="COORDINATES: protein motif:HMM:NF013015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767753.1"
                     /translation="MFATIYLPNFCLQAATRHQPELNPVALIEEQERKPVIIQLNEAA
                     ENAGIRKGMTPSQALARSLQVVIKVRAPTQEKSIQEILLHYAFTLSPFVEDTAPGVCT
                     VQFTNCRNLSEKIGRVIEQLAECEIRAQAAVAPTADSSFLAAQLALPVLQIENAKEFL
                     APLPIETLAMAAT"
     gene            complement(4338..4520)
                     /locus_tag="VIS53_07955"
     CDS             complement(4338..4520)
                     /locus_tag="VIS53_07955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767754.1"
                     /translation="MALLRGLFWFVLFLVLTFCFVVLFEYGPRDFASGAQKEYARVKS
                     FVVKRTEEIEENKKDR"
     gene            4624..4707
                     /locus_tag="VIS53_07960"
     tRNA            4624..4707
                     /locus_tag="VIS53_07960"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4658..4660,aa:Tyr,seq:gta)
     gene            complement(4831..5190)
                     /locus_tag="VIS53_07965"
     CDS             complement(4831..5190)
                     /locus_tag="VIS53_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY5767755.1"
                     /translation="MGTKLYVGNLPFNTTENELQEIFSQAGAVQEVTLMQDRFTGKSR
                     GFAFVTMSSDEEAQNAISKFNGHTMDGRPMTVNEARPREQRPPGGGGGGGGGRYGGGG
                     YGGGRRDGGGQRRGGGY"
     gene            5420..6601
                     /locus_tag="VIS53_07970"
     CDS             5420..6601
                     /locus_tag="VIS53_07970"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase
                     family protein"
                     /protein_id="HEY5767756.1"
                     /translation="MAVTAAGVISPLGFGLAETLESLRSARDCVTPVMRFSVTQCRCK
                     TAGQVSDSRLLASHAQIPRSGRLHRASHMMIQALQELMTQQPEFEPELTVVGTTSGGM
                     SYGERYYRSLNSAGDLRHAPTWIANYPAQKPVIDAQTAFGISAPCHVIANACASGTNA
                     IGHAFECVRSGRYGRVLAGGYDALAEMVFVGFDSLQASTPEKCRPFDRHRSGMVLGEG
                     AALLGLENLDLARERGAAVLAEIIGYGISTDNFHITQPEPSGIGARQAMERALESAHV
                     SAADVDYINAHGTATVFNDATEGKAISALFNGVPVSSTKSMMGHSLGAAGAIEAVVCL
                     LALQHQFLPANINFTAPDDDVDLNVIANEARPAAVSLALSNSFGFGGTNASLIMRKLE
                     A"
     gene            6598..>6882
                     /locus_tag="VIS53_07975"
     CDS             6598..>6882
                     /locus_tag="VIS53_07975"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY5767757.1"
                     /translation="MSLAITGMGWVTPLGTGVDSVWERLLQGEEASATTISDQFGDRV
                     YNVFRVPESALKGISHPRLRRASAISRFGAAAGLHALESAGLKLGSHNAER"
BASE COUNT         1586 a         1795 c         1942 g         1559 t
ORIGIN      
        1 aacatcgtgc gctgggaaat gcggacgcga ttgttcctgc gcacaactga atttctgtgg
       61 caggaaggcc ataccgtcca cgaaacggaa gccgaagcgc gagaagaaac taagcggatg
      121 ctcggcgtgt acgaaacctt tgtgcgcgag cgttgcgcga ttcctgtatt ctcgggtcta
      181 aaatcggaca gcgaaaaatt ccctggggcg gtggaaacca tggcgctcga agcgatggtg
      241 caggatcgca aggcaataca ggccggcaca tcgcattttc tggggcaaaa ttttgcccgt
      301 gcgagcggaa ttcagttcca aacgcgtgag ggcaagcagg aatttgggtg gaccacgagc
      361 tggggcatga cgacgcgcat ggtaggcaca gtcgttatgg cgcacggtga cgacgatggg
      421 gttgttttgc cgccgcgtat cgcgccgacg cacgtcgtta ttctgccaat cacgaccagg
      481 gaagagacgc gcgcgaacgt tttggaaacc tgcgacagac tcgccgcgga gttgcgtacg
      541 aaaaaatttc tcgatgacat cgcgattgag gctgaagtcg atcggcgcga ccttggcggc
      601 ggagttaaga attgggagtg gatcaagaaa ggtgtaccgc tgagagttga gatcgggccg
      661 cgtgatctgg aaaaaaattc ggtcacagtc agccggcgcg atcaaccagt gaagaacaag
      721 gagtcaatgc cgatggacga attcgccgcg cgcgttcccg aaattcttgt ttcgattcag
      781 gcttcgctgt atgcgcgtgc gaaagagttt caggacgcga acacacacgt gataaattcg
      841 aagaaagatt tctacgactt ctttacggcg aaaaaccctt cgaaacccga aatccacggc
      901 ggctttgcgc tcgcacactg gaacgggtcg cgcgaaatcg aagaacagat taagaacgat
      961 ctgaaagtca ctattcgcgt cattccagtg gacgattcgc ccgagccggg ccaatgcgtc
     1021 tttactggtg agccgagtgc acgtcgcgtc gtttgggcga aatcatacta gcgccaggcc
     1081 cgtcaggaac gtgtgtgacg tatgagttga cggcgaggcg gtgactggtt tatttccgcc
     1141 cgccgatgca gttaaagctt tacagccgcg agtggtgttc ctggtgtata gatgcgaagg
     1201 attatctcag cgagaaaggc tattgcttcc aggagatcga cgttggcaaa gatcggcagg
     1261 cgtacgagga aatgaagcag ctttctgctc aaacgtacgt gcccaccttt gtggcggacg
     1321 ataaagtttt ggcaaatttt gacaccaatc agcttcaaaa atttctgaac gagcatcaga
     1381 tcaatccgta gacgcgctgt tccgtgatgc ttttcggtct ccttcttacg cttggcgtag
     1441 ccgtgctgag cgtcggtcta cgcacgtttc acaattcgta tgcgcaaaag gccggagcgc
     1501 tggggattct cgccgccacg tttcttggat tttattttgc taccaataat tgggtgtggg
     1561 gtttggtcgc ggctctagct tggctgtttc tgccttggct ggaaattctc acccggattc
     1621 gggcattgcg acttccaaaa gaaaaacagc ttcgaccgaa aagtccgcca tcgtcagaca
     1681 cgtttccggc gcttagcgaa atcacgcgcg agatcgaaga cgaagggttc atttacgtaa
     1741 gcgacgccgg gtgggattgg gaagattacc ggcagttttt ccgattgttc tacagagaag
     1801 aagatcgtgc ccaggccgct atctgtctga atgaacagcg tgatttctcc ttttattacc
     1861 tgcgcatttc gtcgcgcact aaggacggag cagtttggac aacctggaat taccccttgt
     1921 cctacggctt gaaactctct cccgcgttcc ggatcaatcg gcagcggcca gatcgatctt
     1981 tctggcagct tgatcaaagt catcgcgaat ttttgcggcg aaacaaagtt gatcccgcgg
     2041 agatcgaacc gctcgacgaa gagcagatcc aggctgacat cgagaaagat ctgcgcgacc
     2101 aaatcgcgca caacattcac aaaggcgttc tcaagcaaac cgccgcgggc gacgtgaagt
     2161 attcctggcg cgggatgatt tacctttggt gccagttcct tgtcgatctc gtgcggctat
     2221 agctcgtgtt ccggggtcat ccgagctgag cgagcgacct catgattggc ggttggcgcg
     2281 cgctactcta gaaattctgc cgttagcggt ctaggagaga tttctcgctg ggctcggaat
     2341 gacagttaac gcggggcgat ttatttaacc gcgcggtttt ttggttgcgc gaagctgaat
     2401 ctgttcattt gaacttgcgg attctgcgct ttgaaggatg gtccctgcat gctcaccgac
     2461 aggcaaagga gcgtgcttga ttttattcag cgcgagcaac gggaaaaagg cgttacgccg
     2521 agcacacgcg aaatccagaa tcatttcagg ttcgccagcc agacatcggt gatgcaatac
     2581 atcgcggcgc tggagcgaaa aggttttctc agtcggcacg cgcgcaaagc tcgcgcgttg
     2641 atcacgccag ccatgaaggt tcggattacc gacattccaa tttacggtca gattccggct
     2701 gggatgtcgg cgttgacgga gcagagcatc gaagggcacg tgtcgctgga cacgcgctcg
     2761 gcaaatgtgt tgaagaatcg aggcacattc gcgttacgag tgcggggcga ctcgatgatt
     2821 ggggcgcaca ttgtcgatgg ggatattgtg attttggaag acacgaaaga agtgcacgac
     2881 ggcgatatcg ttgcggcgtt aatcgacggc gaaacgtcat tgaagcgtta tgtggtggag
     2941 cgcggccgcc catatctgaa agcggaaaac ccgcggtatc ccgatctggt gccggcgcgc
     3001 gagcttaaga tacaaggcgt gatggtgtca ctaatccgca agcaagagcg acggaaaaaa
     3061 cattgagtca aaggcggaag gcaagctatt aaatgttcac ttgaacatat cctccagacg
     3121 cgccatgttt atctctcatg gctgcgagcg ccaaaattat cgatcttcgc aacctgctgg
     3181 cggagcgttt ccctcatcct tcatgcacga caacgaagtg cttaattaca ggcttacctt
     3241 ttcttgacga atcgattggc ggcggattgc cgcgtggcgc gatcaccgaa ttgatcagcc
     3301 cgggaaccag cgcgggaagc gcatcgctca ttcacgccct catccattgc gcgtatcgcg
     3361 ataattattt cctggcgctg attgatggac gcgattcgtt tgacccttgc gggttgaata
     3421 atgcgtggct gcaacacctg ctttgggtcc ggtgcagcaa agcatctgaa gccgttaaag
     3481 cggctgattt gcttttgcgc gacgggaatt tcccgctggt gattgtcgat ctgatgctga
     3541 acgtaccgga ggaattgcga aaaattccgc aaacgaattg gtatcgcttg caacggttgg
     3601 tcggggcgct gcccacggca tgtctggttc tcacgcgcta tgaaatggtt agtagcgcgc
     3661 aactgaaact ggtgctcgaa aattcgtggg acattcaaac ttttgaaagc gaggacgcgt
     3721 tttcacgact ccgaattgtt atgaagcgat cgcatctcca atcagaagtc cgaagtcagc
     3781 aatcagcggt caattagagc gatgttcgcc acgatttatt tgccgaattt ctgtttgcag
     3841 gcagccacgc ggcatcagcc ggaactcaac ccagtagcgt tgatcgaaga acaggaaagg
     3901 aaaccggtga tcattcaact gaacgaagcc gcagaaaacg ccggtattcg aaaaggaatg
     3961 acaccgagcc aggcgttggc gcgatcattg caggtggtca tcaaagttcg tgcacccacg
     4021 caggaaaaat cgatacagga aattttgctt cactacgcgt ttactctcag tccttttgtg
     4081 gaagacactg cgccgggggt ttgcacagtt cagtttacga actgccgcaa tttgagtgag
     4141 aagataggtc gcgttatcga gcaattagcc gagtgcgaaa ttcgcgctca agccgcggtt
     4201 gctcccacgg cagatagcag ctttttggca gcacagcttg ctctgcccgt gttgcagatt
     4261 gagaacgcaa aagaatttct cgcaccgctg ccgatagaaa ctctcgccat ggctgcgacg
     4321 tagattgacc accaggctca gcggtctttt ttattttcct cgatttcttc cgttcgcttt
     4381 acgacgaatg attttacccg cgcatactct ttctgagctc cgctggcaaa atcgcgcggg
     4441 ccgtactcga acagcaccac gaaacaaaaa gtcagaacca ggaacaggac gaaccaaaaa
     4501 aggccgcgca gaagcgccat gtcaaaacgt aacggttaca ttagtgctat caacaaccgc
     4561 gaaacctaac gggagttgca agctgtgagg cgcgaggata tatgaaatcc ctcgcgctaa
     4621 aacgggtagg taccgaagtg gccaaacggg gcagactgta aatctgctgg ctttacgcct
     4681 tcgctggttc gaatccagcc ctgcccatat tttcccaagg gatctgtagc gtgcgctgtc
     4741 ctcagcgcag agaatcaaat cggtggcaaa gcgcaaatcc gctgagacag cgaattctcc
     4801 agcacccgtc cgcaggcaac gccagtttgg ctagtaaccg ccgcctcttc gctggccgcc
     4861 gccgtcacgc cggccaccgc cgtacccgcc gccgccgtaa cgtccaccac caccaccgcc
     4921 gccgccaccc ggcggccgct gctcgcgcgg acgcgcctca ttcacagtca tcggccgtcc
     4981 atccatcgtg tggccgttga atttcgagat ggcattctgc gcttcctcgt ccgaactcat
     5041 agtcacaaag gcgaacccac gtgatttgcc agtgaatctg tcctgcatga gagtcacttc
     5101 ctgcacagct ccagcttgcg aaaagatctc ctgcagttcg ttctccgtcg tgttgaaggg
     5161 gagattgcct acgtataatt tggttcccat tgagtttatt ctagaaaacg cagccaggta
     5221 actgtttccg cctatcggat ttcaaatcgc cattgaataa actcaactga caatccacca
     5281 acttccgggc ttccgtttcc cgttttgcgg tcacttgtaa aatgcttctt ttaagaaagc
     5341 aatacaaatc aaggtcaatt tttgacgtta gataatggct caaggagaca ggcgacaaag
     5401 cacgaataat tcagcccgcg tggcagttac ggcggcgggt gtgatcagtc cgctcgggtt
     5461 tggcttggcc gaaacgctcg agtcgttgcg cagcgcacgg gactgtgtga ctccggtgat
     5521 gcgcttttca gtcacgcaat gccggtgtaa aaccgcgggc caggtttccg actcgcgtct
     5581 gcttgccagc cacgcgcaaa tacctcgttc gggacgcctg catcgcgcgt cgcacatgat
     5641 gattcaggcg ctgcaagaac tcatgacgca acagcctgaa tttgaaccgg agttaacggt
     5701 agttggaaca acaagcggag gcatgtctta cggcgagcgg tattaccgat cattaaactc
     5761 agcaggggat ctgcggcatg cgccaacatg gatcgctaat tacccggcgc aaaagccagt
     5821 gattgacgcg cagacggctt ttggaatttc agcgccgtgt cacgtgatcg cgaacgcctg
     5881 cgcgtccggg acaaatgcga tcggtcacgc atttgaatgc gtgcgctccg gtcgttacgg
     5941 acgggtgtta gcgggcgggt acgacgcgct cgccgagatg gtcttcgtcg ggtttgattc
     6001 gcttcaagct tcaacgcccg agaaatgccg gccctttgat cgccatcggt ctggtatggt
     6061 gctcggtgaa ggtgccgcgc tgctgggctt ggaaaatctc gacctcgctc gcgaacgcgg
     6121 cgcggctgtt ctcgccgaaa tcatcggtta cggcatttcc acagacaact ttcacatcac
     6181 gcaaccggag ccatcgggca tcggagcgcg acaagcaatg gagcgggctc tcgagagcgc
     6241 gcatgtctct gcggccgacg ttgattacat caatgcgcat ggcaccgcca cggtctttaa
     6301 cgatgcaacc gagggcaagg caatcagcgc attgttcaat ggtgtgccgg tgagctcaac
     6361 caaaagtatg atgggtcatt ccctaggcgc cgcgggcgcc atcgaggccg tcgtttgttt
     6421 gcttgcgctt caacaccaat ttctcccagc taacatcaat ttcacggctc cagatgacga
     6481 tgttgatctc aacgtcattg cgaacgaagc gcgtccagct gcggtgagcc tggccctttc
     6541 gaactcgttt ggatttggtg gaacgaatgc ttcgctgata atgcgcaagc tcgaagcatg
     6601 agtctggcga ttaccggtat ggggtgggtc acccctctgg gtactggcgt tgattccgtt
     6661 tgggagcgat tgcttcaggg tgaagaagca tccgcgacga cgatctccga tcaattcgga
     6721 gatcgcgttt acaacgtttt tcgcgtaccg gaatcagcgc tgaaggggat ttctcatccg
     6781 cgccttcgtc gcgccagtgc tatttcgcgt tttggcgcgg cggctggatt gcacgcgttg
     6841 gagtctgcag gactaaaact cgggtcgcac aatgctgaac ga
//
LOCUS       DATDAJ010000319         2208 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1855835, whole genome shotgun sequence.
ACCESSION   DATDAJ010000319 DATDAJ010000000
VERSION     DATDAJ010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1855835"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VIS53_07980"
     CDS             complement(<1..446)
                     /locus_tag="VIS53_07980"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HEY5767758.1"
                     /translation="MTTSRTIAAQMFAYYLHNLDPIIFRIYDNVGPRWYGLAYVLAFV
                     SSYFLFLWLSKRGYADLPPQRVGDFITGCALFGVIVGGRLGYVFFYKPEMLREPLSIL
                     RVWEGGMSSHGGMLGLILFTLYYARRHRISWLNVGDNLVVTAPLGL"
     gene            complement(456..>2208)
                     /locus_tag="VIS53_07985"
     CDS             complement(456..>2208)
                     /locus_tag="VIS53_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit A"
                     /protein_id="HEY5767759.1"
                     /translation="QFTDLSAGEAARAIGKLKFKGRDQTVAAGLIPEIQQRLRFMETV
                     GLGYLALGRSAKTLSGGESQRIRLAAQLGSNLRGVLYVLDEPTIGLHPRDNQRLLETL
                     TTLRNKGNSLIVVEHDEETMRRADHIVDLGPRAGIHGGEVVVSGTLSDVQKNPNSETA
                     RCLKSQPCHPIRGSRRSLRDVENWIEIRSARANNLKNIDVRFPVARLSVITGISGSGK
                     STLMHDVLLPRVRETLGSARFQRAGEGILPSRTSQLRLWPDKSRKDKSSLPQHAATST
                     LQACAPQNIGVIAAVYEVDQSPIGKTSRSTPGTYVKVFDEIRTLYAQLPVSRMRGYSA
                     SRFSFNAEGGRCETCKGQGVIKLEMNFLPSSYVSCEDCQGRRYNPQTLEVLYNEKSIG
                     DVMEMTIEEAAQFFSAHPKIARPLSLLVDTGLGYLKLGQPSPTLSGGEAQRLKLVTQL
                     KRGVSRAADERIRKMRKPGSTLYLLEEPTIGLHMADIELLLNVLHRLVDEGNTVVVIE
                     HNLSVIAEADYIVDLGPEAGANGGEVVAFGTPEQVAKNRVSRTAPFLRKVLNKPRFCS
                     RRPEVDAHVSHSETATV"
BASE COUNT          478 a          644 c          602 g          484 t
ORIGIN      
        1 aacaatccga gcggcgcggt tacgacgaga ttgtcgccga cgttcagcca cgaaattctg
       61 tggcggcgcg cgtagtaaag cgtgaacagg attaggccga gcatcccgcc gtgactcgac
      121 atcccgcctt cccagacgcg cagaatcgac aacggctcgc gcaacatttc cggcttgtag
      181 aagaaaacgt agcccagacg tccgccaacg atcacgccga acagcgcgca gccggtgatg
      241 aaatcgccga cgcgttgcgg cggcagatcc gcatatccgc gcttggacag ccagaggaaa
      301 agaaaatagc tcgatacaaa cgcaagcaca taagcgagcc cataccatcg cggtccaacg
      361 ttgtcgtaga tccggaaaat gatcggatcg aggttgtgta gatagtacgc gaacatttgc
      421 gccgcgattg tgcgcgacgt tgtcaatctg cgcaatcaaa ctgtagccgt ttcgctgtgc
      481 gacacgtgcg cgtcgacctc agggcgacgg ctacaaaaac gcggtttgtt caaaaccttt
      541 cgtaaaaatg gcgcggtgcg gctaacgcgg ttcttcgcca cttgttccgg tgttccaaaa
      601 gcgactactt cgcctccatt ggcgcccgct tccggcccca gatccacgat ataatcggct
      661 tcagcgatca cactaagatt gtgttcaatg acaacgactg tatttccttc gtcgacgagc
      721 cgatgcagta cgttcaggag caattcaatg tccgccatgt gcaggccgat ggttggttcc
      781 tcgagcaaat acaatgtcga tcctggcttg cgcatttttc gaatccgttc gtccgccgcg
      841 cggcttactc cgcgttttag ttgtgtcacc agcttgaggc gctgcgcttc gccgccactt
      901 agagtgggac tcggttgtcc gagtttcaga tacccaaggc cggtgtcgac cagcagcgaa
      961 agcggacgcg cgatcttagg atgcgctgaa aagaattgcg cggcctcttc gatcgtcatt
     1021 tccattacgt cgccgatgga tttctcattg tagagaacct ccagcgtctg cgggttgtac
     1081 cggcggccct ggcaatcttc acacgagacg taactgctgg ggagaaagtt catctcgagc
     1141 ttaatcacgc cctgaccctt gcacgtctcg cagcgcccgc cttcggcatt aaacgagaat
     1201 cggctcgccg aataaccgcg catccgtgat acaggcaatt gcgcgtacag agttcgaatc
     1261 tcatcgaaca ctttcacgta ggttcccggc gtcgagcgcg aggtttttcc gatcggcgat
     1321 tgatcgactt cgtacacggc ggcgatgacg ccgatattct ggggagcgca cgcttgtagc
     1381 gtgctggttg ccgcatgttg cggcaacgaa cttttgtcct ttcgggattt atccggccac
     1441 agacgcaatt gggaagttcg tgaaggcaga atgccttcac cagcacgctg aaagcgtgcg
     1501 ctccccagag tttcccgaac acgcggcaat agcacatcgt gcatcagcgt tgatttgccc
     1561 gagcccgaaa ttcccgtgat gactgaaagg cgtgcgaccg gaaaacgcac gtcgatgttc
     1621 ttcaaattgt tcgctcgcgc gctacgaatc tcaatccagt tttcgacatc gcgcagcgag
     1681 cgacgtgatc cgcggatcgg atgacacggc tgcgatttca agcaacgcgc agtttcggaa
     1741 tttggatttt tctggacgtc gctgagcgtt ccgctcacca cgacctcgcc gccgtgaatt
     1801 ccagcgcgcg gcccgagatc gacgatgtga tcggcgcgcc gcatcgtttc ttcgtcgtgt
     1861 tcgaccacga tcaatgaatt gcccttgttc cgcagcgtcg tgagcgtttc gagcaggcgc
     1921 tgattatcgc gcggatgcaa accaatcgtt ggctcgtcca gcacgtaaag cacgccgcgc
     1981 aaatttgagc cgagttgcgc agccaaacgg attcgctgcg attcaccgcc actcaaagtt
     2041 tttgccgagc gcccaagcgc gagataaccg agtccgacgg tctccatgaa acgcagccgt
     2101 tgttgaatct cgggaatgag acccgcagct accgtctgat ccctcccttt gaatttaagt
     2161 ttcccgatgg cgcgcgctgc ttcacctgcc gagagatccg tgaattga
//
LOCUS       DATDAJ010000320         6019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1861281, whole genome shotgun sequence.
ACCESSION   DATDAJ010000320 DATDAJ010000000
VERSION     DATDAJ010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1861281"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIS53_07990"
     CDS             <1..400
                     /locus_tag="VIS53_07990"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5767760.1"
                     /translation="SSRPAKQSIASKPVSFRYKPEIESTRPRGFGLIAEDVEKISPDL
                     VTRGNDGQVNAVRYDAVNAMLLNEFLKEHRKVEEQATQIEQQTATISHLRKEIETIIA
                     HSKEQDLQIQKVTDQVQIDRSDARVATTDQ"
     gene            complement(539..1255)
                     /locus_tag="VIS53_07995"
     CDS             complement(539..1255)
                     /locus_tag="VIS53_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEY5767761.1"
                     /translation="MSASIKTVPRHIAIIMDGNGRWAKSRGLARIKGHEAGAQAVREC
                     VEGCGELKVEYLTLYAFSAENWQRPRAEIIALMRLLEKFLKEKTPELLEKNVRLQAIG
                     RLTDLPQSAQEQLHKSIEQTSGNTGLILILALSYGGRLEIIDGIKSLLRAIELGHIDR
                     AMIDVEMFSKHLYTRYYPDPDLLIRTSGEMRLSNFLLWQTSYTEMYVTPKLWPDFKKQ
                     DLLAAVEEFGRRQRRYGAVE"
     gene            complement(1572..2921)
                     /locus_tag="VIS53_08000"
     CDS             complement(1572..2921)
                     /locus_tag="VIS53_08000"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEY5767762.1"
                     /translation="MPLTYYLWASPDCVPQDASGKFFAHFRFHMANTILIGMQWGDEG
                     KGKIIDVLTANADIVVRSQGGNNAGHTVIHRGVKYVLHLIPSGILRQRKVCVIGNGVV
                     IDPVALVAEMDGLRRLGVNIDKNLLISDCAHLVLPYHRLLDEQRELRRGRIGTTKRGI
                     GPAYGDKAARTGLRISDLMQPLVFSKKLQAKITENNRILQALGAKPISFRDVNETYLA
                     AGKRLRPFVTNTVVYLHRAMDRGKQILFEGAQGTFLDIDHGTYPYVTSSNTTAGGACT
                     GTGVPPHRMDRVVGVMKGYSTRVGDGALPTEDAQLAQMLHNLGREFGATTGRKRRCGW
                     FDAVATRYAGMINGIDEIAITNLDGLDQVDPIRICVGYQLLGKRLDVPPCDAAQLANC
                     EPVYEEVAGWNTSTHTARKFSQLPSAARKYVRYISELAGAKLSMLSVGPTRGETIML"
     gene            complement(3671..4081)
                     /locus_tag="VIS53_08005"
     CDS             complement(3671..4081)
                     /locus_tag="VIS53_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767763.1"
                     /translation="MEPDGILPDLQSAVICEDVRCEVNGMQTLVGVLSVIPAPSLPIN
                     YFRLCIWTRWCSGSGKFHQKSRLVGVDEQQVVAQAEVEFVLKEMEGHATNVHYFGGVQ
                     FQQYGMHHVEIYLENELQLRFPLPVIQVQQRPPG"
     gene            complement(4091..4951)
                     /locus_tag="VIS53_08010"
     CDS             complement(4091..4951)
                     /locus_tag="VIS53_08010"
                     /inference="COORDINATES: protein motif:HMM:NF014703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY5767764.1"
                     /translation="MSDYLLSVFLGVVEGLTEFLPVSSTAHLRICEALLHIDLHDGFW
                     KMYTIVIQLGAILALPVYFWGRIMRFIRTFPKGERGNRTIFTHPLSLTLIAFVVTAVP
                     AWALAKVIGKNLESLWVMAFALLIGGIIMWIVDAVFTRPRTMHMDEMTLPQAVWIGAA
                     QILSAVFPGTSRSMSTIAAGQIAGMSRPAALEFSFFLSMPTMAVAVGYDFLKSVIPHH
                     HEAEIAPLTITPHQWVVLAIGFVVSFFVALAVVAWFMNWVRDRGFVPFAVYRIVLGLG
                     LLTLLMRGMM"
     gene            complement(5093..5431)
                     /locus_tag="VIS53_08015"
     CDS             complement(5093..5431)
                     /locus_tag="VIS53_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY5767765.1"
                     /translation="MKKIEAIIKPFKAEPVREALMAAGVEGMTLSEVKGFGRQKGHSE
                     IYRGTEYTVDFLPKIKFEIVISDDRAQRAVEAILEKAKTGKIGDGKIFLTEVEDAVRI
                     RTGERGMEAL"
     gene            complement(5513..>6019)
                     /locus_tag="VIS53_08020"
     CDS             complement(5513..>6019)
                     /locus_tag="VIS53_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HEY5767766.1"
                     /translation="VDQHAAHERVLFEELRRRMEQQGVPTQKLLLPQTFDVPPRDADW
                     IEQNLSVLQRMGIGIESFGPGTFKIDSLPSFLDVSDAAQFMRKVIDDLKSASNNASAM
                     RLGEEMIAKTVCRHAVKANDPLRYPEMEKLIRDLLDCDLPYCCPHGRPTMIQISLAEL
                     EKKFGRKI"
BASE COUNT         1364 a         1683 c         1607 g         1365 t
ORIGIN      
        1 atccagcagg ccagcgaagc aatctatcgc ctcaaaaccg gtgagcttcc gctacaagcc
       61 ggagattgaa tcgacgcgcc cgcgcgggtt cgggctcatt gctgaagatg tagaaaagat
      121 aagtccggat ctggtgactc gcggcaatga cggccaggtg aatgcggtac gttacgacgc
      181 cgtgaacgct atgttgctca atgagtttct caaagagcat cgaaaggtgg aggaacaggc
      241 gactcaaatc gagcaacaga cagccacgat cagccatcta aggaaggaaa ttgaaacaat
      301 catcgctcac tccaaagaac aagacttaca gatccaaaaa gtaactgatc aggtacagat
      361 cgacagatct gacgcccgag tcgctacaac cgatcagtaa cagcagcgat cagcgcgtga
      421 gttgagacga catcgttgat gacggccttc cgagttgtac cggtgctccc cggggcgagc
      481 accgaggcag gcgttcgcag cggcgaatgt ctctcacaac caaatcaggc ggtgacggct
      541 actccaccgc tccgtaacgc cgctggcggc ggccgaattc ttccactgcg gcgagtagat
      601 cttgcttttt gaagtcaggc cacagcttcg gcgtgacgta catctcggtg taggaggttt
      661 gccaaagcag aaaattcgag agccgcattt cgccggacgt gcggataagg agatcgggat
      721 cgggatagta acgcgtgtaa agatgtttgc tgaacatctc tacatcgatc atggccctat
      781 cgatgtgccc cagttcgatt gcgcgaagca aacttttgat gccgtcgata atctcgagtc
      841 gtccgccgta gctcagcgcc agaatgagga tgagaccggt gttgccggaa gtttgctcga
      901 tacttttgtg aagttgttcc tgcgcgcttt ggggcagatc agtcaagcgg ccaatggcct
      961 gaagacgcac attcttctcg agcaattcag gcgttttctc ctttaaaaat ttttccagca
     1021 aacgcatcag cgcgataatt tcagctctgg ggcgctgcca gttttcagcg gagaacgcgt
     1081 agagcgtgag atattccacc tttaactcgc cgcaaccttc gacacattct cgaactgcct
     1141 gggcaccggc ttcgtggcct ttgatgcgag ccagtccgcg cgacttcgcc caacggccgt
     1201 tgccatccat gattatggcg atgtggcggg gaacggtctt gatgcttgca gacatcgttg
     1261 cagtgctagc ggttcgaatt ggcagcgcca acggcgcagc aatcacctga atcctggggc
     1321 gacgccccat gattcgtgaa atggtaaagg tcagcgctga aagcgcgatt cacttgtgtt
     1381 gtcattttgt tcgatgatca ttggttcgca agtgcggtgt taattactac gagcgttatc
     1441 tctcggcatt gcgagccgtc atccccattg aatcgcgctt tcagcgctcg gctattgcct
     1501 atctaattcc tggggcgttg ccccaggcta gcctgagaca gcgcctttgg cgctaaacaa
     1561 atagagcggc atcacaacat gattgtctct ccgcgcgtgg ggccgacgct caacatggag
     1621 agttttgcac cggccagttc ggagatgtat ctgacatatt ttctcgcggc cgaaggaagc
     1681 tgcgaaaatt ttcgtgcagt gtgtgtagac gtgttccagc cagcgacttc ttcgtaaacg
     1741 ggctcgcaat tcgcgagttg agctgcgtca catggcggaa catccagccg ttttccgagt
     1801 agctgataac caacacaaat gcggattgga tcgacctgat ctaatccatc cagattggtg
     1861 atcgcgatct cgtcaatgcc gttgatcatg cccgcgtaac gagtcgccac agcgtcgaac
     1921 caaccgcagc ggcgttttcg tccggttgtc gcaccgaatt cgcggccgag attgtgaagc
     1981 atctgtgcta attgcgcatc ctccgtaggc aatgcgccgt cccctactcg cgtcgagtag
     2041 cccttcatca cgccgacgac acgatccatc cggtgcggtg gcacgcccgt gccggtgcac
     2101 gcgccacccg ctgtggtgtt tgaggaagtc acatacgggt acgtgccgtg gtcgatatcg
     2161 aggaatgttc cctgcgcgcc ttcgaacaaa atttgtttac ctcgatccat cgcgcggtgc
     2221 aggtaaacca ccgtgttcgt cacaaacggc cgcaatcttt tgccggctgc aagatatgtt
     2281 tcgttcacat cacgaaagct gatcggcttc gcaccgagcg cttggaggat tctgttgttt
     2341 tcggtgatct tcgcctgcaa ttttttcgag aacacaagcg gctgcatcag gtcagagatg
     2401 cgcaagcccg tgcgtgctgc cttgtctccg taagctggac cgattccccg tttggtggtg
     2461 ccaatccggc cacggcgcag ctcacgctgc tcgtcgagga gccggtgata cggtagaacg
     2521 agatgcgcgc aatcgctgat gagcaggttt ttgtcgatgt tgactcccaa tcggcgcaag
     2581 ccatccatct cggccacaag cgcgactgga tcgataacca cgccgttgcc gatcacgcaa
     2641 actttgcgct gccggaggat tcccgacgga atcaaatgca gcacgtattt cacgccacgg
     2701 tgaatgactg tgtgtcccgc attattgccg ccctggctgc gaacaacgat gtcagcgttc
     2761 gcagtaagca cgtcgataat tttgcctttg ccctcgtcgc cccactgcat tccgatcaaa
     2821 attgtgtttg ccatgtgaaa tcgaaaatgg gcaaaaaatt ttcccgacgc atcctgcggg
     2881 acacagtcgg gacttgccca tagataataa gttaggggca tcgccgcgca acaaattttg
     2941 caatttagcg cgtcttagtc cccgcattcg gaatcggcat gggaacgcgc gtatctgttc
     3001 agcctgatgc agcaggtagg gcgcgccact ccgtgcgcgc cgatttcgat ctgccagcta
     3061 acgacgtgca aaggactgcc gccctacctc cgcccggcgc aagctctcac tcatcttcca
     3121 gagggagaag ggctcggcgc ttctcgtccg gattccatca ttgtggggcg aatcggtccc
     3181 aacccttcga tactggcacc tcgcgatgtg gagggacgag acgacctcct ttgctcaatg
     3241 ggtgtttctc ttttcacggg cctgtgagtt tcagcaacag tgggattcgg caccggagtg
     3301 gtctcgacat ccggctcgcg cgtcttcgta gattgcgaaa cagaccggtc cttcggtcct
     3361 tctgcagcgc gtgccccagc ggctcgcatt tcttcaagcg tcagtcttgc aggagcggac
     3421 ttcttttcgc gcgacttgga tttgcgtggc gctggtgttt ctgattcgga agcaagctgt
     3481 tcagaaggct gcggtgtttg tgtgggaagt tcaggttttt tttcgcgggc aacgattact
     3541 tcctgcgcat gtattttccc gatgagaacg acagtgcaga gtgtcgctcc aaaaaatcgt
     3601 ttcagcatga tgccgcctga taaacgattt agcccattca caacccttcg ttcatgagac
     3661 gttaccgaat tcaaccaggc ggacgctgct gcacctgaat caccggcaac ggaaatcgca
     3721 actgcaattc gttttcgagg taaatctcga cgtgatgcat cccgtactgt tgaaactgca
     3781 cgccaccaaa ataatggaca ttggtcgcgt ggccttccat ctctttgagc acaaactcaa
     3841 cctccgcctg cgcgactacc tgctgttcgt ccacgcccac gaggcgagat ttttggtgaa
     3901 atttgccgga accgctgcac caacgggtcc agatgcagag ccgaaaataa ttgataggta
     3961 atgagggcgc cgggatgaca ctcagcacgc ccacgagagt ttgcatgccg ttgacttcac
     4021 agcggacgtc ctcgcaaatg accgcgcttt gcaggtcggg aagaatgccg tcaggttcca
     4081 tattagctga tcacatcatt ccacgcatta acagcgtcaa caatccaaga ccgagcacaa
     4141 tccggtaaac cgcaaacggc acaaatcccc ggtcgcgcac ccagttcatg aaccacgcca
     4201 cgactgccag cgcgacgaag aacgagacta caaatccaat tgcgagcacg acccattgat
     4261 gcggagtgat tgtaagcggc gcaatctccg cttcgtgatg gtgcggtatc acgctcttca
     4321 gaaaatcgta tcccacggcg accgccattg tcggcatcga aagaaaaaac gaaaattcaa
     4381 gtgcggccgg acgtgacatg ccggcgattt gcccggcagc aatcgtggac attgagcgcg
     4441 acgtgccggg gaaaacagcg gagagaatct gcgcggcgcc gatccagacc gcctgcggca
     4501 gtgtcatttc gtccatgtgc atcgtgcgtg gccgagtaaa aacggcgtca acgatccaca
     4561 tgatgattcc gccgatgagc agcgcgaagg ccatcaccca aagactttcg aggttcttgc
     4621 cgatgacttt tgcgagcgcc cacgcgggaa cggccgtcac cacaaacgcg atcagcgtga
     4681 ggcttaaggg atgggtgaag atggtgcgat tgccgcgttc gcctttcgga aacgtgcgaa
     4741 taaatcgcat gatgcgaccc cagaaataca cgggcaaagc gagaatggct ccgagctgga
     4801 tcacgatcgt gtacattttc cagaacccat catgcagatc gatatgcagc agcgcttcgc
     4861 agatgcgcaa atgtgcggtc gaactcacag gaagaaactc ggtcagtccc tcgacgactc
     4921 cgagaaacac ggagagcaag tagtcggaca tatttgacct aaaccttacc ggtcactgtc
     4981 attctgagcg aagcgaagaa tctcggatca tcaatcgacc ggccaccaac agaaatagac
     5041 cgagatgttt cgcttcgctc aacatgacag ttgagacgcg agcactccgc actcacagcg
     5101 cttccatgcc tcgttcaccg gtgcggatac gcactgcgtc ttccacctcg gtcagaaaaa
     5161 tcttgccgtc gccgattttt ccggttttgg ccttttccag aatcgcttcg accgcacgct
     5221 gagcgcgatc gtcagagatc acgatttcga acttaatctt tggaagaaaa tccacggtgt
     5281 attccgtgcc acgataaatc tcgctgtgcc ccttctgccg gccgaatcct tttacttcgc
     5341 tcagagtcat tccttcaacg cctgcggcca tcaaggcttc tcgcactggc tcggccttga
     5401 acggttttat aatggcctcg atttttttca ccgcgcaaat taaacccgtc cgcattcgaa
     5461 atggcaagca cgcgggatta aatgacgaaa gacaatcgta aaaagcgcgt catcagattt
     5521 ttcggccaaa ctttttttcc agttcggcca gcgaaatctg gatcattgtt ggtcggccgt
     5581 gcgggcagca ataagggaga tcgcagtcga gcaaatcccg gatcaatttt tccatctcag
     5641 gataacgcaa cggatcgttg gctttgaccg cgtgacggca aacggttttc gcgatcattt
     5701 cttcccccaa gcgcatcgct gaagcgttgt tgctggcgct tttcaaatcg tcaatgactt
     5761 tgcgcatgaa ttgcgccgcg tccgacacat cgagaaagct tgggagactg tcgatcttga
     5821 atgtgccggg accgaagctc tcaattccga ttcccatcct ttgcaggacc gacagattct
     5881 gctcgatcca atcggcgtcg cgcggcggca cgtcgaatgt ttgcggcaaa agcaactttt
     5941 gcgtgggcac tccctgctgt tccattctgc gccgcaattc ttcgaacagg acgcgttcgt
     6001 gcgcggcgtg ttgatccac
//
LOCUS       DATDAJ010000321         2422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1864991, whole genome shotgun sequence.
ACCESSION   DATDAJ010000321 DATDAJ010000000
VERSION     DATDAJ010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1864991"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VIS53_08025"
     CDS             complement(<1..642)
                     /locus_tag="VIS53_08025"
                     /inference="COORDINATES: protein motif:HMM:NF015413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY5767767.1"
                     /translation="MVGKILEPEIRSMIQARDFAALREVFREWPPADVAEVILDLPED
                     EQVIIFRVLPHALAADVFEYLDFEAQEQLLRAMAHEQVGAILNEMAPDDRTALLEELP
                     GAAARQLIRLLTPEERRVATALLGYPEDSVGRLMTPDFIAVHEDWSVQQVLDYVREHG
                     RDSETLNFVYVVDDRGKLIDDVRMREFLLRPLTAKVSDIRDQTFGALNVTDSQQ"
     gene            774..>2422
                     /locus_tag="VIS53_08030"
     CDS             774..>2422
                     /locus_tag="VIS53_08030"
                     /inference="COORDINATES: protein motif:HMM:NF027439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEY5767768.1"
                     /translation="MKIMPTVAIAPMIRRETGDDHVCVLTFDRPDSGANIFDAATLDE
                     LNEQLDAVEKDASLRGLIIASAKKSIFVAGADLKTLLQAAKTGEMREFIEPGQQVFNR
                     LANLKIPTVAAIHGASAGGGYEVALACDYRVASHAPATRIGLPETGLGLLPAWGGCTR
                     LPRLIGAAKAAEVISKGKLYSAQEALNIGLADEIAPSDQLLDRAREKLRAGKRKMEGG
                     APATPGLLAPPKQTGNLALARAYEIINKTQSISLDESLRLELEGIVELGQTESTQNLI
                     RNFFLAEKYKKGTSRTLPEKIVHAAVIGAGVMGSGIAQWLSSRGVTVILRDVAREQID
                     RGLANVEKIYADAVKRNLMSDEKAKQGRARICGSTAPMELRDVQFVIEATSEKMEIKK
                     EVFRELAMEAGPKTIVATNTSALAVSELAEVTVSPEHVIGLHFFNPVSRMKLVEVVIA
                     KQTSDETRDRSLAFVRQIGKLPVIVRDSPGFLVNRVLFPYLLDAAELVESGMDAERID
                     RALVKWGMPMGPLRLIDEIGVDITIDIGNTLEKAYGQRDRVP"
BASE COUNT          542 a          675 c          692 g          513 t
ORIGIN      
        1 ctgctgcgaa tcagtcacat tcaacgcccc gaaggtctga tcgcgaatgt cgctcacctt
       61 cgccgtaagt ggccggagca ggaactcgcg catccgcacg tcgtcaatta attttccgcg
      121 gtcatcgacg acatatacaa agttcagtgt ctcgctgtcg cggccgtgtt cacgcacgta
      181 atcgagcact tgctgcacac tccagtcctc gtgcactgcg ataaaatccg gcgtcatcaa
      241 acggcccacg ctgtcttcgg gatagccgag cagcgccgtc gcgacgcgtc gctcttccgg
      301 ggtaagcaat cggatcagtt gtcgcgcggc tgcgccaggc aattcttcga gcagcgccgt
      361 gcgatcgtct ggcgccatct cgtttaaaat cgccccgacc tgctcgtgag ccattgcgcg
      421 cagcaactgc tcttgcgctt caaagtcgag atattcaaaa acgtcggctg ccagcgcgtg
      481 cggcaaaact cgaaagatga tgacctgttc gtcttccggc agatcgagaa tgacttcggc
      541 cacatcagcc ggcggccatt cacgaaacac ttcacgcagc gccgcgaaat cgcgcgcctg
      601 gatcatgctc ctgatttccg gttctaagat cttgccgacc acgtggcgtt tctaacactc
      661 gcacttgccc aaagcaacga accgcgaagc cttcttcaaa acattacaaa acgcgcctgc
      721 ctggtgctta gcttcggtct tctacacttg gcattttccg gaaacgttcc aaaatgaaga
      781 taatgcccac cgttgctata gctccgatga ttcggcgtga gaccggcgac gatcatgttt
      841 gcgtgcttac gttcgatcgc cccgactcgg gcgcgaacat tttcgacgct gctactctag
      901 atgagttgaa tgaacagctc gatgctgtgg agaaagacgc ttccctgcgc ggtttgatca
      961 tcgcttccgc aaagaaatcc attttcgtcg cgggcgcgga tttgaaaacg ctgttacaag
     1021 cagcgaaaac cggcgaaatg cgggaattta ttgagcccgg gcaacaggtt ttcaatcgcc
     1081 tggccaacct aaaaattcca acggttgccg ccatccacgg cgcgtcggcc ggcggcggct
     1141 atgaagttgc gctcgcctgc gattatcgcg tcgcatcgca tgcgccggcg acacggatcg
     1201 gtctgcccga aacgggcctg ggacttcttc ccgcctgggg cgggtgcacg cgattgccgc
     1261 gattgatcgg cgccgcaaag gccgcggagg tgatttcgaa aggcaaactg tattccgctc
     1321 aggaagcttt gaacatcgga ctcgccgatg aaattgcgcc atccgatcag cttctcgatc
     1381 gcgcacgtga aaagctgcgc gctggaaaac gcaaaatgga gggcggagct cctgcgacgc
     1441 cgggcttgct cgcgcctcca aaacaaaccg gaaatctggc gcttgcacgt gcttacgaaa
     1501 tcatcaataa aacccagtcg atttcgctcg atgaatcgtt gcggttggag ctcgagggga
     1561 ttgtcgagct tggccagacg gaatcgacgc aaaatctgat tcgcaatttt ttcctcgcgg
     1621 agaaatacaa aaaaggaacg tcacgcacgc tgcctgaaaa aatcgtgcac gccgcggtga
     1681 ttggcgccgg cgtgatgggc tcaggcatcg cgcaatggct cagctctcga ggcgtcacgg
     1741 tgatcctgcg cgacgtcgcg cgcgaacaaa ttgatcgcgg gttggcgaac gttgaaaaaa
     1801 tctacgccga tgccgtgaag cgcaatttga tgagtgatga aaaggcgaaa caaggtcgtg
     1861 cccggatctg tggttccacc gcgcccatgg agttgcggga tgtgcaattc gtgatcgaag
     1921 cgacttctga gaaaatggag atcaagaaag aagttttccg cgaactggcg atggaagccg
     1981 ggccgaaaac cattgtggcg acaaatactt cagctcttgc ggtcagcgaa ctggccgaag
     2041 tgacggtttc gcctgagcac gtgatcggat tgcatttctt caatccggtg agccggatga
     2101 aactggtgga agttgttatt gcgaagcaaa catccgacga aacgcgcgac cggagcctgg
     2161 cttttgtacg gcagatcgga aaactgccgg tcatcgtgcg cgatagcccc gggttcctgg
     2221 tgaaccgcgt tttgtttccg tacttgctcg atgctgccga gctggttgaa agcggcatgg
     2281 atgcggagcg gatcgatcgc gcgttggtga aatgggggat gccgatgggt ccgctgcgat
     2341 tgatcgatga aatcggcgtg gatatcacta tcgatatcgg caacacactc gagaaggctt
     2401 acgggcagcg cgatcgcgtc cc
//
LOCUS       DATDAJ010000322         3584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1871000, whole genome shotgun sequence.
ACCESSION   DATDAJ010000322 DATDAJ010000000
VERSION     DATDAJ010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1871000"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..401)
                     /locus_tag="VIS53_08035"
     CDS             complement(<1..401)
                     /locus_tag="VIS53_08035"
                     /inference="COORDINATES: protein motif:HMM:NF036808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767769.1"
                     /translation="MAGIVIKPRARILHGHDWVFSSEVLKVFGNPADGDVISLKDGKD
                     HLIGSAIYNSKSQIVARRFSRRRQDLDKDFFRRRIEQASEYRDRRNIDAKLRRVVWSE
                     SDGLPGVIIDRYGDDFVLQTLTLAMDMRKDL"
     gene            complement(446..2488)
                     /locus_tag="VIS53_08040"
     CDS             complement(446..2488)
                     /locus_tag="VIS53_08040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767770.1"
                     /translation="MQIFFGTCLFFVAVILLAYVPGKLLLIALKRALTPLEDVTLACV
                     LGLVLSGLVYWLMTFAHQGRFYLVWPLTAAGVCVWLRISKRKSLLSQSVSREPLSQGS
                     AMPPRDRSTLVLAGVLILGIIALAFLPLYYTNFTWQPGGTMRVYPVPDVLFHIAIANE
                     LTHTVPPQAPVFSGHPLSYHYGMDLAVAMFARATGLNTRDLTVRFVPTLFVGLSMLSV
                     FCFSKNWLRSGYFGALVVFLVFFGADFSFVPGLLLGEKGDWSLRYFSAPAVVTLFFTN
                     PILPGLGVLFAGLFCLDCYMRERSRAWLFLAALLFVALIEVKMLMAGQLMCSLALAAV
                     VYLIFFSNADLFKIAGCTAIGAIPMVCWVLLKNRSGGQIVTKFEPWLYVSHAMQTLGL
                     GNWLSGPLAFAVVALPIYLVGCLGLRVIGVPAIFTAIFRPRPEGALRFLLGIFVVFGV
                     VIALTCSFTPAGWTFRYNPISSTFLVQSEYVAWIFAVEVFQTFYQWAIRRGMYPALAA
                     GGITAIAAGLSLPATVQHFVVWRDPDNFFGAGKPFGRQLLTYDLQTLAAMNFLQKDAH
                     PGDVVLTADNLIAPVLGLTKCRVPIGYFALGLVARSDYTRRETAEKKFWTDWRLGKVE
                     DGLLQDANVRYVVVNKQTEGIPATIPASLSMVFENSEFAVFKVDPQRLSETVPKST"
     gene            2631..>3584
                     /locus_tag="VIS53_08045"
     CDS             2631..>3584
                     /locus_tag="VIS53_08045"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY5767771.1"
                     /translation="MHSALQSPERRSISVVTPVYNGEASIAELCRRLGEVLPRVATQY
                     EIILVNDDSRDRSWEIISELCSRSSTVRGLNLMRNYGQHNALLCGIRAAQYDVIVTMD
                     DDLQHPPEEIPRLLEQLEQRFDVVYGTPKAEQHGFLRALASRITRLALSMAIGRELAK
                     NVSAFRVFRTRLREAFADYQSPFVSIDVLLTWATTRIGAITVGFEPRRSGASTYTFRR
                     LLRHALDMMTGFSTLPLQLASLIGFSCTLLGIAVFLYVVVRYCLEGSVPGFPFLASII
                     AIFSGAQLFALGVIGEYLARIHFRTMNRPIYIVRSVSGEAKE"
BASE COUNT          895 a          982 c          949 g          758 t
ORIGIN      
        1 atcaaatcct ttcgcatgtc cattgccagc gtgagcgttt ggaggacgaa atcgtcgccg
       61 taacgatcga tgatcacgcc cggaagaccg tcgctttcgc tccacacaac gcggcgcagc
      121 tttgcgtcga tgtttcgccg gtcccgatat tcggacgctt gctcgatgcg gcgccggaaa
      181 aaatccttat caaggtcctg ccttcgtcgc gagaaacggc gtgcaacgat ttgcgatttc
      241 gaattgtaaa tcgcgctccc aatcaaatgg tctttgccgt ccttgagcga tatgacatcg
      301 ccatccgcgg gatttccgaa aaccttgagc acttcgctgg aaaacaccca gtcgtgtccg
      361 tgcaaaattc gcgcccgcgg ttttatgacg atgcctgcca tgaaagagga atgctttgtg
      421 caatcttcga gcgcgcggtt cgatactatg tggatttggg cactgtttcg ctcaaacgtt
      481 gtgggtccac cttgaacaca gcgaactcgg aattttcaaa caccattgat agactggcgg
      541 ggatcgttgc aggaatacct tctgtttgct tgttaacgac gacgtatcgc acatttgcgt
      601 cctgcagtaa gccgtcctca acttttccca atcgccagtc ggtccaaaac ttcttttccg
      661 cggtctccct gcgcgtgtaa tcgcttcgtg caaccaaccc aagagcaaaa tagccgatcg
      721 gcacccggca tttggtcaat ccgaggacag gcgcgatcag gttgtccgca gtcaacacga
      781 catcacccgg gtgcgcatcc ttctgcagga aattcatggc cgccaacgtt tgcagatcgt
      841 aagttaacag ctgtctgccg aaaggtttcc cggctccgaa gaagttatcc gggtcgcgcc
      901 aaactacgaa gtgctgcacc gtcgcaggta aactgagccc tgctgcaata gctgttattc
      961 ctcctgcggc gagtgcagga tacatccctc gcctgatagc ccattggtag aacgtttgaa
     1021 aaacttctac tgcaaaaatc caggccacat attcgctctg taccagaaac gtgctgctaa
     1081 ttgggttgta tcgaaaagtc catcctgctg gcgtaaagct gcacgtcagc gcaatgacca
     1141 cgccgaaaac cacaaaaatc ccgagcaaga accggagagc gccctctggt cttgggcgga
     1201 atattgcagt aaagattgcg ggaacgccga tgacgcggag cccaagacaa cccacaaggt
     1261 aaattggcag cgctacgacg gcgaaagcaa gcgggccgct caaccagttg cccaatccaa
     1321 gggtctgcat cgcatgcgag acataaagcc atggctcgaa ttttgtgacg atctgtccgc
     1381 cgctcctgtt cttgagcaac acccagcaaa ccatgggaat cgccccaata gcagtgcatc
     1441 cggcgatttt gaataggtct gcgttggaaa agaaaatgag ataaacgaca gcagccaatg
     1501 caagactgca catgagctgc cccgccatca gcatcttgac ctcgatcaac gcgacaaaca
     1561 gcagcgcagc gaggaaaagc catgctcggc tgcgctcgcg catataacaa tcaagacaga
     1621 ataaccccgc aaagagaact cctagtccag gcaggattgg attagtaaag aagagagtga
     1681 caactgccgg cgcgctaaag taacggagag accagtcacc tttttcgccc agcagcaacc
     1741 cgggaacaaa cgaaaagtct gcgccgaaaa aaacgagaaa tacgacgagg gcgccgaagt
     1801 atcccgaccg cagccaattt tttgagaagc agaaaacact cagcatcgac agaccgacga
     1861 acaaagtcgg aacaaaacgg actgtaagat cacgggtgtt caggccggtc gccctcgcga
     1921 acatcgcaac cgcaagatcc atcccgtaat gatacgagag cgggtgaccg gaaaagaccg
     1981 gcgcttgcgg aggtacggtg tgcgtcaact cgttagcgat cgcaatatga aacagcacat
     2041 caggcaccgg atagacgcgc atcgtgccac ccggctgcca tgtgaagttg gtataataga
     2101 gcggcaaaaa tgctaaagcg atgattccga gaatcagaac tccggctaaa acaagtgtgg
     2161 acctgtcgcg cggcggcatc gcgcttcctt gggaaagcgg ctcacggctg acagattggc
     2221 ttaaaagtga tttgcgtttg ctaatgcgga gccaaacaca aacgccggca gcggtcagcg
     2281 gccaaacgag gtagaaacgt ccttggtgag caaacgtcat taaccagtaa acaagcccgc
     2341 tcagcaccag gcccagaaca caagccaaag tcacgtcttc cagcggggtc aatgcccgct
     2401 taagcgcaat tagcagcaat ttgcctggca cgtatgccag caaaatgacc gcgacaaaaa
     2461 aaaggcacgt gccgaagaag atttgcatca ctgaattaaa cttgcaccgc ctgaccggga
     2521 acagactagc tcatctggca aaccgtcagg caaggcaaaa gggcaatatc acgagcgttg
     2581 ctttgacgaa ctgccggttg tctcataccg tcggaggctt tttgctgaac atgcactcag
     2641 cgttgcaatc tcccgagcgg cgttcgattt ccgtagtcac gccagtttac aatggtgagg
     2701 cttcgatagc tgaattgtgc cggcgtctcg gcgaagtgtt gccgcgggtc gcgacgcagt
     2761 acgagatcat cctggttaac gacgatagcc gggaccgaag ctgggagata atttctgaac
     2821 tgtgttcgcg gtcgtcgacg gtgcgcgggt tgaatctgat gcgcaactat ggccagcaca
     2881 atgcgctgct ctgcggcatt cgggcggcgc agtacgatgt gatcgtgacg atggatgacg
     2941 atctgcagca cccgcccgaa gaaatcccgc gactgctcga acaactggaa cagcgattcg
     3001 acgtcgttta cggcacgcct aaagcagaac aacatgggtt cctgcgcgct ctcgcgtccc
     3061 gaatcacgcg actggctctg agcatggcca ttggaaggga actcgcgaaa aacgttagcg
     3121 ctttccgtgt gttccgcacc cgattgcgcg aggcatttgc agattatcaa tctccgtttg
     3181 tttctatcga tgtgctgctt acctgggcaa cgactcggat cggcgccata accgtcggtt
     3241 tcgagccacg tcgctctgga gcttcaactt acacgtttag gcggttgtta cgccatgcgc
     3301 ttgacatgat gaccggcttt agcactctgc cgttgcagct tgcgagcctg attgggttta
     3361 gctgcacgtt acttggcatt gcggttttcc tttatgtcgt cgtccgttat tgcctggagg
     3421 gaagtgtgcc gggatttccg tttctcgcgt cgatcattgc catcttttcc ggcgcacagc
     3481 ttttcgctct gggcgtgata ggcgaatacc tggcccgcat ccattttcgg acgatgaatc
     3541 gtcccattta cattgttcga agcgttagcg gcgaagcaaa agag
//
LOCUS       DATDAJ010000323         4244 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1873689, whole genome shotgun sequence.
ACCESSION   DATDAJ010000323 DATDAJ010000000
VERSION     DATDAJ010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4244)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4244)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4244
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873689"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /locus_tag="VIS53_08050"
     CDS             complement(<1..406)
                     /locus_tag="VIS53_08050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767772.1"
                     /translation="MTNKFIGLVTGIALIGGSTTLIAQEGTTKQAEGTLMLEKKTYPL
                     KHALAYETTIDNEQAIAVVLSGPAISSEKLKEAKEREKGGNDPDFKRPFLRLVFTNTG
                     AFKHWSAAAGGTMLGRRSGSATGELKLRDGRVI"
     gene            complement(476..925)
                     /locus_tag="VIS53_08055"
     CDS             complement(476..925)
                     /locus_tag="VIS53_08055"
                     /inference="COORDINATES: protein motif:HMM:NF042761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6691 family protein"
                     /protein_id="HEY5767773.1"
                     /translation="MKAPKAFGFLVAGGLFGGGLAISGMTDPARVIGFLDVFGKWDPA
                     LLFVMAGAVGIYGLGMFLLRKAASDTNALQSLSCARLKLPTVGPSSIDRQLVIGAAIF
                     GVGWGLGGFCPGPALANLGAFRLEAFVFVPAMAIGMLLAQQFFGADR"
     gene            complement(922..1344)
                     /locus_tag="VIS53_08060"
     CDS             complement(922..1344)
                     /locus_tag="VIS53_08060"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEY5767774.1"
                     /translation="MDHYTYLHALIGGLLIGFASLIATLLSGKVPGISGVFGRLLVPS
                     TPDKVWRLVFLLGLIGGAALSFSLWDSAALFRPLRPLWIMAVAGLLVGFGTRLGGGCT
                     SGHGVCGVGMGAKDSIVATFIFVAVAMVTVLVYNRVIL"
     gene            1584..3707
                     /locus_tag="VIS53_08065"
     CDS             1584..3707
                     /locus_tag="VIS53_08065"
                     /inference="COORDINATES: protein motif:HMM:NF042769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY5767775.1"
                     /translation="MKKTPLRCVAAVSVLLPVCCFAEAFSIEQVLSAPFPYGLTSAQH
                     APRVAWVFDNKGERNIWVADAPDFVPRQVTHYKGDDGQMIASVRLTPDGKTVVYARGS
                     ETNKEGSSANPTSQTKKPKQQAWAINVSGGEPHLLGDVGCSEEGCEDLQVSPDGKNVV
                     WSAKRHLWIAPIDGKKKAEQLDELAGESDTPRWSPDGKRIAFRSNRKDHSFIAVLDLA
                     TKKITYLAPTTNRDAIPVWSPDSKQVAFIRQPGIEFKRPLIPEFPRPWALWITDAQSG
                     EGRELFHSGNAMEDSLPLFAFESLKFTNAGRIIFTSEKDGRNHLYSISATGGALQLLT
                     PGNFDVEEVMLSADKRSVLYTSNQNDIDRRHIWRVGASGGEPKALTSGETIEWNPVET
                     SDGKTVLCLGSTATSPAMPYRLTSSGRELIAKNAIPAEFPQAQLVTPKQVMFKSEDGL
                     EIHGQLFTPKEKAQRDPALIFTHGGPIRQMLLGFHYMEYYHNAYAMNQYLASKGYTIL
                     SVNYRLGIMYGRAFREPPKSVWRGASEYQDVIAGAKFLQTLDNVDPQRIGLWGGSYGG
                     FLTAMGLARNSDIFKAGVDFHGVHDWATFLPTWVAYVDAKNADVAPDLKEARELALKS
                     SPVASIANWRSPVLFIHGDDDRNVPFQQTTDLVEKLRAQKVAFEELIFPDEIHDLLRW
                     SDWIRAYRATAQFLDRRLAASGKQQ"
     gene            3924..4235
                     /locus_tag="VIS53_08070"
     CDS             3924..4235
                     /locus_tag="VIS53_08070"
                     /inference="COORDINATES: protein motif:HMM:NF025120.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY5767776.1"
                     /translation="MPISKTLKTRNKHRGSSFDDFLKQEGLLENVQAAAFKRALALKV
                     NDMMKEKRMNKSAMAARMRTSRAAVHRLLDPKNTSVTLATLNRAARSLGCKVKIEFVP
                     A"
BASE COUNT         1019 a         1243 c         1152 g          830 t
ORIGIN      
        1 caatcacccg accgtcccgc agcttgagtt ctccggttgc gctgccgcta cggcggccga
       61 gcatcgtgcc tcccgccgct gcgctccaat gcttaaatgc tcccgtgttc gtaaacacca
      121 gcctaaggaa aggccgttta aaatcgggat cgttacctcc cttttccctt tctttcgctt
      181 ccttcaattt ttcgctcgaa atcgccgggc cgcttaggac caccgcgatc gcttgctcgt
      241 tatcgattgt cgtctcatac gcgagcgcgt gttttagcgg gtaggtcttc ttctcgagca
      301 tcagcgtccc ctcggcctgc ttggttgtcc cttcctgcgc aatgagcgtc gtcgaaccac
      361 cgatgagggc gatgccagtc actaaaccga tgaatttgtt cgtcataata attgcttttc
      421 cttgaggcgg cagatttcag cagcaaaaca attaagtgcc aagcacgaag tcggctcagc
      481 gatcggctcc gaaaaactgc tgggcgagaa gcataccgat cgccatcgct ggcacgaaga
      541 cgaatgcttc caatcggaac gcgccgagat tggcaagcgc aggtcccggg caaaagccgc
      601 cgagacccca gcccacgcca aaaatcgcag cgccaatcac gagctggcga tcgatcgatg
      661 aaggtccaac ggtgggcagt tttaatctcg cacagctcaa actttgtagg gcgtttgtgt
      721 cagaggccgc cttgcgcagc aaaaacatcc cgagcccata gattccgacc gcccctgcca
      781 taacgaacag caaagctgga tcccatttgc cgaacacgtc gagaaatccg attacccgcg
      841 ccggatcggt catcccggaa atggcgagcc ccccgccgaa gaggccgcca gcgacgagga
      901 aaccgaaagc tttcggtgct ttcataaaat gacacggttg tagacgagca ctgtgaccat
      961 cgcgacagcc acgaaaatga acgtcgccac gatcgaatcc tttgcgccca tcccgacgcc
     1021 gcagacgcca tgaccgctcg tgcaacctcc gccgagccga gtcccgaatc cgacgagcaa
     1081 tcccgcgacc gccatgatcc agagtggccg caagggccga aagagcgcgg cactatccca
     1141 aagagaaaaa ctcaaggcag cgccgccaat caaaccaagc agaaaaacta atcgccaaac
     1201 tttatccggc gttgacggga caaggagacg accaaacact cctgagattc cgggaacttt
     1261 tccgctcaaa agagttgcaa tcaggctggc gaatccaatc aggagtccac cgatcaacgc
     1321 atgcagatac gtgtaatgat ccatcaagcg ttccttcttt cacttcaact ctcaacaatc
     1381 aactctcaac cgatcacgat ccttcacaac cgtcgcaatc aggctggcca gcgttcctgg
     1441 tttgaaagcc tggccgttgc ttcgccgcgt ataagcaatt ctttgggtgg cggaaatcat
     1501 gtcatttacc cggcttcgca tacgttgcag cctgattcat ttatttgcta agcgcaccgg
     1561 ggggcgagta gagtcgcgcc gctgtgaaaa aaactccact ccgttgtgtc gcagccgttt
     1621 cggttctttt gccggtctgt tgttttgccg aagcgttcag catcgagcag gtgctgagtg
     1681 caccattccc gtacggccta acgagcgcgc agcatgcgcc acgcgtcgcc tgggtgttcg
     1741 acaacaaagg cgagcgcaac atctgggtcg cagacgcgcc ggacttcgtg ccgcgacagg
     1801 tgacgcatta caaaggcgac gatggccaga tgatcgcgag cgtgcgactg acgccggatg
     1861 gaaagacggt cgtttatgcg cgcggcagcg agaccaataa agagggcagc tcggcaaatc
     1921 cgacaagcca gacaaaaaag ccaaagcagc aggcttgggc gataaatgtg agcggcggtg
     1981 aaccgcattt gctcggcgac gtcggttgta gcgaggaagg ctgcgaagat ctgcaggttt
     2041 caccggacgg aaagaatgtc gtttggtccg cgaagaggca tctctggatc gcgccgatcg
     2101 acggcaaaaa aaaagcagag cagctagacg agttagcagg cgagagcgac acaccgcgtt
     2161 ggtcgccaga cggaaagcga atcgcgtttc gctcgaatcg caaggatcac tcgtttattg
     2221 ctgtgctcga tctggcgacc aagaagatca cttatctcgc gccgacgacg aatcgtgatg
     2281 ctattccagt ttggtcaccc gacagcaaac aggtcgcgtt tattcgtcaa cctggaatcg
     2341 aattcaaacg gccgctcatt cctgagttcc cgcgcccgtg ggcgctttgg attacagacg
     2401 cgcaaagcgg cgaaggccgc gagctgtttc acagcggcaa cgcgatggaa gattcgttgc
     2461 cgctgtttgc gtttgaatca ctgaaattca cgaacgcagg ccgcatcatc ttcacgagcg
     2521 agaaagacgg acggaaccat ctctactcga tcagcgccac cggtggagcc cttcagctcc
     2581 tcacgcccgg caactttgat gtcgaggaag tgatgctgag cgccgacaag cgcagcgtcc
     2641 tctacacgtc gaatcagaac gacatcgatc gcaggcacat ctggcgcgtc ggcgcgagcg
     2701 gcggcgaacc gaaggcttta actagtggcg aaactattga atggaacccg gtcgagacga
     2761 gcgatggaaa aacggtgttg tgtctcggct caactgcgac ttcgcccgcc atgccttatc
     2821 gcctaacgag cagcgggcgc gagttgatcg cgaagaatgc gattccggct gagtttccgc
     2881 aggcgcagct agtcactccg aagcaagtca tgtttaaaag cgaagatggc ctggaaattc
     2941 atggccagct gttcacgcca aaggaaaaag cgcaacgcga ccccgctctc attttcacgc
     3001 acggcggacc gatccggcag atgctgctcg ggtttcatta catggagtat taccacaacg
     3061 cctatgcgat gaatcaatat ctggcgagca aaggttacac catactctcg gtgaattacc
     3121 ggctcggcat catgtacggg cgcgcgtttc gcgagccgcc gaaatcggtg tggcgcggcg
     3181 catccgaata ccaggatgtg atcgcgggcg cgaaattttt gcagacactc gacaacgttg
     3241 atccgcagcg gatcggtctc tggggcggat cctacggcgg atttctgacc gccatgggtc
     3301 ttgcgcgcaa ctcggatatt ttcaaggccg gcgttgattt ccacggcgtg cacgactggg
     3361 cgaccttcct gccaacgtgg gtcgcgtacg tcgacgccaa gaacgccgac gtagcgcccg
     3421 acctcaaaga agcgcgcgag ctcgccctca aatcgtcgcc agtggcaagc atcgcgaact
     3481 ggcgctcacc ggtgctgttc atacacggcg acgacgatcg caacgtgccg ttccagcaaa
     3541 ccaccgacct ggtagaaaaa ctgcgcgcac aaaaagtcgc gttcgaggag ctaatcttcc
     3601 ccgacgaaat tcacgacctg ctccgctgga gcgattggat ccgcgcctat cgcgccaccg
     3661 cccaattcct cgaccgcaga ctagcggctt caggcaagca gcaataagcc gggtgcgggg
     3721 acatcgcgtt atcgtcctca tcgtcgttca cgtcctcgaa aacctttctc gaagatctct
     3781 tggcagccgt atcagaaatg atacagttat gcagtgcccc gaccattgcc cgctgttttc
     3841 tttaggacgg aaagagggcg ggagctgatg aacacgcttc tggatttatc tgtgacatcc
     3901 gcgtaatccg cggttctcaa aaaatgccta tctcaaaaac gcttaagaca aggaacaaac
     3961 atcgcggaag cagctttgac gatttcctca agcaagaggg attactcgag aacgttcaag
     4021 ccgcagcgtt taaacgagct ctcgcgctga aggtgaatga catgatgaaa gaaaagcgca
     4081 tgaacaagag cgcaatggct gcacgtatgc gaacgtcgcg cgccgcagtc catcggctcc
     4141 tcgaccccaa gaacacgtcg gtgacacttg ctacactaaa ccgcgccgcg agatcgctcg
     4201 ggtgtaaggt caaaatcgaa ttcgtaccgg catagcggta tcgg
//
LOCUS       DATDAJ010000324         2320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1875416, whole genome shotgun sequence.
ACCESSION   DATDAJ010000324 DATDAJ010000000
VERSION     DATDAJ010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875416"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VIS53_08075"
     CDS             complement(<1..300)
                     /locus_tag="VIS53_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEY5767777.1"
                     /translation="MAASKKEKPDLQKKVHEVPHRPGVYLMRDRFNRVIYVGKARDLR
                     KRVSSYFLPSKLAQADLKTRALLDATWDFETHTVRSEAESVLLEGKLIKEYRPRYN"
     gene            complement(563..997)
                     /locus_tag="VIS53_08080"
     CDS             complement(563..997)
                     /locus_tag="VIS53_08080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767778.1"
                     /translation="MKQIRLTKILAAGLVFAASLGLALAQTTTTTTSTDPVTGTTTTQ
                     QTTTSTAGNIVTYTPDSDYFTFRTASGAAPVRYYYTKDTAIVDPAGRTVTWSAVRPDM
                     PATVYYSTVGDRVVVRKVVLAQPAQPAAVIKETTTTTTTTKP"
     gene            1167..>2320
                     /gene="hisS"
                     /locus_tag="VIS53_08085"
     CDS             1167..>2320
                     /gene="hisS"
                     /locus_tag="VIS53_08085"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR00442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEY5767779.1"
                     /translation="MQALPGFRDFLPDDCARRNYIFARWREVARRYGFVEWEGPPLEA
                     TELYKKKSGAEIVEQLFNFKDKGEREVALRPELTPTLARVVAAHQREFKKPLKWFSVG
                     QFFRYEKQQRGRLREHFQLNCDMIGEKDLAVDIELVALCIDILRAFGFTEKDFVVRIS
                     DREFWTDFFRAKNVPAERWDDLLQAIDKSARESREKTAEKLGDLADPVFATLKSVGKS
                     AKLEQLVDGLRARGLGDSVAIDVGIVRGLAYYTGIVFEVFDRAGKFRAIAGGGRYDNL
                     ISQLSDGTLSLPALGFAMGDVVLGELINEIPQAREAMQKALANDSKIDIYVVIAKEER
                     RADALAQIQQLRDRGYRIDYPLTPTKVARQFQAAEDLGARVALLYGDEWP"
BASE COUNT          487 a          628 c          649 g          556 t
ORIGIN      
        1 gttatagcgc ggccggtatt ccttgatcaa tttgccttcg agcaaaaccg attccgcttc
       61 gctacggacc gtgtgcgttt caaaatccca tgtcgcgtcg agcagggcgc gtgttttcaa
      121 atcggcctgg gccaatttcg agggcaaaaa atacgaactc acccgtttgc gcaggtcgcg
      181 cgctttgccg acgtaaatca cgcggttgaa ccggtcgcgc atcaagtaca cacccggcct
      241 gtgcggtact tcgtgcactt tcttctgcag atcaggcttt tctttttttg atgcagccac
      301 cgggcggcaa atttacgtgc aaagcgagtg gctatcaaaa agcggcgcag cagcgccgca
      361 ctccaaaacg catgcgcggc attgagcgtc gaattacggc cacgttttgg agtgcggcag
      421 tgctcttgcc gctttcgcac aggaaaactt ctttgccgac ctccaccgtt gacattcgtg
      481 ggtaatccga agtcctaaat gcaaaaaagc gcccgcgaga gttttcgcgg gcgctttgag
      541 ttctagctaa acaacaattt cgctacggct ttgtcgtcgt agtggtagta gtcgtttctt
      601 taatcacagc ggctggttgc gcaggttgcg ccaatactac tttgcggacc acaactcgat
      661 cgcccactgt tgagtagtaa acggtggcgg gcatgtctgg acggactgcc gaccaggtta
      721 cagtgcgacc tgccggatca actatcgccg tatccttcgt gtagtaataa cgtacgggcg
      781 ccgcacccga cgccgttcgg aacgtgaagt aatccgagtc gggggtgtag gtgacgatgt
      841 ttcccgcagt gctggtagtc gtctgttggg ttgtcgttgt gccggtcact gggtctgtgc
      901 tcgttgttgt cgttgtggtc tgtgcgagcg ccaatcccag cgatgctgca aaaaccaagc
      961 cggctgccaa tatttttgtt aatctgattt gtttcatatt tgtccctctg ctttgattca
     1021 atggatgttc tccatcgtgt atcttcccgg tcctttaacg cgggagttct ttcaccttcg
     1081 acctcatatc gtaaattctg tccccgatgg tcgtgtccgc ggcgatgatc aaaacgcctg
     1141 ctctctgaca acgtaacatt ctgcttatgc aggctttacc cggttttcgc gattttctgc
     1201 ccgacgactg cgccaggcgc aattacattt tcgcacgttg gcgtgaggtc gcgcgccgtt
     1261 acggcttcgt cgaatgggaa ggcccgcctc tggaggcgac cgagctgtac aagaagaaaa
     1321 gcggcgcgga aattgtcgag cagcttttca atttcaaaga caaaggcgaa cgcgaagtcg
     1381 cactgcgtcc tgaactcacg cccacgcttg ctcgtgtggt tgcggcgcat caacgcgaat
     1441 tcaagaaacc actcaaatgg ttctcggtcg gacaattttt ccgatacgag aagcaacagc
     1501 gcgggcggtt gcgcgaacat tttcagctga attgcgacat gattggcgag aaggatctcg
     1561 ccgttgacat cgaactggtc gcgctttgca ttgatatcct gcgtgcgttc ggattcaccg
     1621 aaaaagattt cgtcgtccgg attagcgatc gcgaattctg gactgatttt ttccgcgcca
     1681 aaaacgtgcc cgctgagcgg tgggacgatt tactgcaagc gatcgataaa tcagcgcgag
     1741 agtcgcgtga gaagacggca gagaaactcg gggaccttgc cgaccccgtc ttcgcgacgc
     1801 tgaagagcgt cggcaaaagc gcaaagctag agcaactcgt tgatgggctg cgcgctcgcg
     1861 gcctcggcga ttccgttgcg atcgatgtag gaatcgttcg tggacttgcc tattacaccg
     1921 gaatcgtgtt cgaggtgttc gatcgtgccg ggaagttccg ggcgatcgcc ggcggtggcc
     1981 gctatgataa tctcatttcg cagctgagcg atggcacgct ttctctgcct gcgcttggat
     2041 tcgcaatggg tgacgtcgtt ctcggcgaat tgatcaacga aatcccgcaa gcacgcgagg
     2101 cgatgcagaa agcgttagca aacgatagca agatcgacat ctacgtcgtt atcgcaaaag
     2161 aagaacgccg cgccgacgca ctcgcacaaa tccagcaact gcgcgatcgc ggctaccgca
     2221 tcgattaccc gctcacgcca acgaaagtcg cccggcagtt ccaggcggcc gaagatttgg
     2281 gcgcccgcgt cgcgcttctt tatggagatg agtggccgca
//
LOCUS       DATDAJ010000325         3289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1877155, whole genome shotgun sequence.
ACCESSION   DATDAJ010000325 DATDAJ010000000
VERSION     DATDAJ010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1877155"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..731
                     /gene="pdxH"
                     /locus_tag="VIS53_08090"
     CDS             81..731
                     /gene="pdxH"
                     /locus_tag="VIS53_08090"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEY5767780.1"
                     /translation="MEFPHDPAASRYEHVGKGLRRRDLNRDPVKQFGNWFTAAIEAGI
                     HDVNAMSLATADRDGRPSVRIVLLKSFDQDGFVFFTNYESTKGKQLEANPFAALGFYW
                     IELDRQIRISGKVEKTSREESQTYFHSRPVGSQLSAWASRQSEVLDGRRMLDARMAEM
                     TERFGDKRIPLPPHWGGYRLKPDKMEFWQGRTNRLHDRFRYTRLPDGSWQIDRLAP"
     gene            761..1321
                     /locus_tag="VIS53_08095"
     CDS             761..1321
                     /locus_tag="VIS53_08095"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: protein motif:HMM:NF001664.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEY5767781.1"
                     /translation="MVKALKRKKMRERPFAKKYPHSNIDIARGDITKLGVDAIVNAAN
                     TTLLGGGGVDGAIHRAAGPELLAECRTLGGCRPGQAKITRGYRLPVRFVIHTVGPVWR
                     GGKHDEPRTLANCYRNSLQLAVKNEIKTLAFPAISCGAYGYPIEEAAHIAIQMTREFL
                     AVSDNPQKVIFVAWGEDVYDAYLQIL"
     gene            1433..1924
                     /locus_tag="VIS53_08100"
     CDS             1433..1924
                     /locus_tag="VIS53_08100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767782.1"
                     /translation="MNPNENDFTRDEPLPTQQFQPREEDIGTTGREQFRRAKEEVSTQ
                     MSQTWDQTKEKANLALERTEDFMRENPVPTILGALGLGIAIGLAIRYAAPSERKREIV
                     VESPWGKFNWSVLSLPFLWPLFKSVREKSEDVMRNGVKQWKKVDVEQYAKPIRKRWKA
                     WTR"
     gene            2061..2735
                     /locus_tag="VIS53_08105"
     CDS             2061..2735
                     /locus_tag="VIS53_08105"
                     /inference="COORDINATES: protein motif:HMM:NF012900.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEY5767783.1"
                     /translation="MIVQIYEVTTPAEGRALGELGVDHIGVLVGEGSFPREQTIEKAR
                     HIFAAIPAGSKACALSLSHDADLIMRFTAALLPDILHLGAAPHHLSPAQLRTLKTKFP
                     QVALMRSIPVVDESSIGLARSYDGIADWLLLDSYESGDRQIGALGVTHSWELDRRIIE
                     SVRIPTIIAGGLGPANVQEAIRVARPAGVDSKTKTDKSDGSHTKDLQTVSAFVEAARG
                     ANCATN"
     gene            2861..>3289
                     /locus_tag="VIS53_08110"
     CDS             2861..>3289
                     /locus_tag="VIS53_08110"
                     /inference="COORDINATES: protein motif:HMM:NF018755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HEY5767784.1"
                     /translation="MGNVNAIQLFAFIPLFATAFVGCTSSNSAGGGPGIQQTVAGGSK
                     WGHYNGEPVTKWNSDGRTMTLLTELRYTDPHGEVWLAPIGSLVDGASIPRYLWSVMGG
                     PFEGRYRNASVLHDVAYGQRKRPWQDCDRMFYFAMRCSGVG"
BASE COUNT          750 a          872 c          962 g          705 t
ORIGIN      
        1 agagaacgcg ccacaggcgc gttgctacag caggcggccc cgacatggac attctggcga
       61 ctcgattgta ggaattcgta atggaatttc cgcatgatcc tgcggcttcg cgttacgagc
      121 acgtcggcaa aggtctgcgt cggcgcgacc ttaatcgtga tccggttaaa cagtttggga
      181 attggttcac cgccgcgatt gaggctggca ttcacgacgt caatgcgatg agtcttgcga
      241 cggcggatcg cgatggcaga ccgtcggtgc gaatcgttct gctgaagagc ttcgatcaag
      301 atggcttcgt gttctttacg aattatgaaa gcacgaaggg gaaacagctt gaggccaatc
      361 cattcgccgc gcttgggttt tactggatcg aactcgaccg gcaaattcgt atcagtggaa
      421 aagtggaaaa gacgtcgcgt gaagagtcgc agacgtattt tcattcgcgt cctgtcggaa
      481 gtcagttgag cgcatgggca tcgcgtcaaa gcgaggtgct cgatggccgg cgtatgctcg
      541 atgcgcgcat ggcggagatg actgagcgct tcggcgataa gcgaattcca ttgccgccgc
      601 actggggcgg ttatcgactg aagccggata aaatggaatt ttggcagggc cgtaccaacc
      661 gtttgcacga ccggtttcgg tacacgcgac tgccggatgg atcgtggcaa attgatcggc
      721 tcgcgccgtg agaactggct gcgccacgtt acatcgttga atggttaaag cgttgaagcg
      781 gaaaaagatg cgcgaacgac catttgcgaa gaaatatccc catagcaaca tcgatatcgc
      841 ccgcggcgac atcactaaac tgggcgttga tgccattgtg aacgcggcga acacgacgct
      901 cctcggcggt ggcggcgtcg atggcgcaat tcaccgcgcc gcaggcccag aactgctcgc
      961 cgaatgccgc acgctcggcg gttgtcgccc aggccaagct aaaatcacgc gcggatatcg
     1021 tttgccagtt cgattcgtca ttcacacagt tgggcctgtt tggcgcggcg ggaaacacga
     1081 cgaaccgcga acactggcaa attgctaccg caattccctg cagcttgcgg tgaaaaatga
     1141 aatcaaaaca ctggcgtttc cggcgattag ttgcggcgct tacggttatc cgattgagga
     1201 agccgcgcac attgcgatcc aaatgacgcg tgaatttctc gcggtaagcg ataatcctca
     1261 gaaagtgatt ttcgttgctt ggggcgaaga cgtttacgac gcgtatctcc aaatcctgta
     1321 gccgcttccc tgtccccgaa gcgcgaaatg tgcattcggt gcggcatttt cggccagcaa
     1381 atggccacat ccgagaaacg caatcgtgcc tcgacatacg atacaatttt gtatgaatcc
     1441 aaacgaaaac gattttacga gggacgaacc gcttccgacg cagcaatttc agccgcgcga
     1501 agaagacatt ggcacgactg ggcgtgagca gtttcgtcga gcaaaagaag aagtttccac
     1561 gcaaatgagc cagacctggg accaaaccaa agagaaggcg aacctggcgc tagagcgtac
     1621 cgaagatttc atgcgcgaaa atcctgtgcc gactattctc ggcgcactcg gccttggaat
     1681 cgccattggt ctggccatcc gctacgccgc tcccagcgag cgcaaacgcg aaatcgtggt
     1741 ggagtcgccg tgggggaaat tcaactggag cgttttgtca ctgccatttc tctggccgct
     1801 gttcaaatcg gtccgcgaaa aatcggaaga tgtcatgcga aacggcgtta aacagtggaa
     1861 aaaggtggac gtagaacagt acgcaaagcc tatccgcaaa cgctggaaag cgtggacgcg
     1921 ctgagcgctg gcggaatttg ttgagtcgca ttcagtggcg ccggcaaaaa gctcggagcg
     1981 ccgcgcaagt ctgcacgaga attctcgtgt ttcacgccgt gctagctaga taatttgtcc
     2041 gcaagccgca acttgcggca ttgattgtcc aaatctacga agttactacg cccgccgagg
     2101 gtcgtgcgct cggcgaattg ggtgtcgatc acatcggtgt tttggtcggc gagggctcgt
     2161 ttccgcgcga gcagacaatc gaaaaggcgc gccacatttt tgcggcgatc cccgcgggct
     2221 caaaagcatg cgcgttgtcg ctttctcacg acgcggatct cattatgcgc ttcaccgccg
     2281 cgctcctgcc agacatcctg catctcgggg cagcgccaca tcatctttca ccagcgcagt
     2341 tacgaacact caaaacgaag tttccgcagg tcgcgctgat gcggagcatt cccgtagttg
     2401 acgaaagcag tattggcctc gctcgttcgt acgatgggat cgccgattgg cttcttctcg
     2461 atagctacga atccggcgat cgccagatcg gagccctggg cgtgacacat agctgggaac
     2521 tggaccggcg cattatcgaa agtgttcgca tcccaacgat catcgccggg ggactaggac
     2581 cagcgaatgt tcaggaggct attcgcgtcg cgcgtccagc aggcgtcgat tcgaagacaa
     2641 aaaccgataa gagcgacggt agtcatacaa aagatttgca gacggtgtcg gcattcgtgg
     2701 aggcggcgcg tggcgcgaat tgcgccacca attaacatct tgtttactcg gcgttgtgag
     2761 cattgctctc tgaataccgt ccggtggcat aattcatctg atcagatgcc attgtgccaa
     2821 cagttgaatc ttgatcgttg aacgatgaac gttcccgttc atgggaaacg taaacgcaat
     2881 tcaattgttc gcgttcattc ctctgttcgc gaccgctttc gttgggtgca cttcaagcaa
     2941 tagcgcaggt ggcgggcctg gtatccaaca aaccgtcgca ggtggatcca aatggggcca
     3001 ctacaacggc gagccggtga cgaagtggaa ttcggacggg cgaacaatga cgctgttaac
     3061 tgaactacgc tacaccgatc cgcacggcga agtctggctc gcgccgatcg gttcgctcgt
     3121 cgatggcgca tccattccgc ggtatctttg gtcggtcatg ggcgggccgt ttgaaggcag
     3181 atatcggaac gcttcggtgc tgcacgatgt cgcgtacggc cagcgcaagc ggccgtggca
     3241 ggattgcgac cgaatgtttt atttcgccat gcgttgcagc ggggttggc
//
LOCUS       DATDAJ010000326         6705 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1885865, whole genome shotgun sequence.
ACCESSION   DATDAJ010000326 DATDAJ010000000
VERSION     DATDAJ010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6705
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1885865"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            195..2192
                     /gene="nuoF"
                     /locus_tag="VIS53_08115"
     CDS             195..2192
                     /gene="nuoF"
                     /locus_tag="VIS53_08115"
                     /inference="COORDINATES: protein motif:HMM:NF010120.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEY5767785.1"
                     /translation="MADATRIEIPAELERKMDHAIARYPSEHRRSAAMPLLHLWQEHF
                     GFITDEAIFWIAQKLGLQPINILEVVTFYPMFRQHPAGKTHIRVCRTLSCAMAGGLEL
                     MDNLCAPLGIQRSSDGEEMHNPIVVSADGNYSVEFVECLASCHTAPVCMVGEQLHERV
                     DPNSAADFLRNGRAAIGNLQLPWPPHPLEHRLVYKNIGRPGWTSDIECYLRDGGYEQL
                     KQALTLSREDIVNKVKNSGLRGRGGAGFSCGLKWSFIKPDEKRPVYLICNADESEPGT
                     FKDRYIIHEDPHQLLEGMLISCYALNVHTAYIYIRGEFPEGANILERAIEEAQQHNFL
                     GKNILGSGFDVEFYLHRGAGAYICGEETGLIESLEGKRGYPRIKPPYFPAVLGLYMCP
                     TIVNNVETLCNIKHIMAMGGAEYARLGRPNNTGTRVLCVSGDVQRPGYFEVEVGAVTM
                     GQLIYEMAGGLRPGRKLKAVIPGGSSAKVLRADERLKLKERQTDGSTIEREIAIDDIP
                     MDFDSLAAAGSMAGSGGVIVLDDSRDMVWALNNINKFYAHESCGQCTPCREGSLWMQK
                     ITDRMLRGGGVVEDPKTLKTIGDNIAGRTICAFGEACAWPTQSFVQKFPEEFASRAQK
                     PIPPPLPPEYTSEELIEEESIPTVPMAHDPGWEKAGAKGTI"
     gene            2277..4088
                     /locus_tag="VIS53_08120"
     CDS             2277..4088
                     /locus_tag="VIS53_08120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY5767786.1"
                     /translation="MSDAPSAPPLFNVQIDGVWHQFAKGTRVIEACERVGIFVPRYCY
                     HKKLSSPGNCRMCLIEMGFPRLGPDRKPELGADGKPIINWMPRPQISCAQDVAEGMAV
                     RTDSPLVKECQRGVMEFLLINHPLDCPICDQAGECRLQEFSVDYGSSQSRFLENKVKK
                     PKAVQLGPRVTLDDERCILCSRCIRFCQEIAHDDVLGFVDRGSHTILTAHPGRSLENN
                     YSLNTVDICPVGALTSTDFRFKMRVWFLKETKSICTSCATGCNTIIGTREDVVYRQTP
                     RENDYVNSCWMCDYGRLNYKYLEADGRLLEPQIRSGGRLVPADWPTAVGQAALHLKQF
                     ADSEIAIVASGRMTNEELWLTAQLVSSLGVKWVDIVPRRGRADKILLSKDRNANTNGA
                     RLILGSRSAPGAKLMAIADAVRSGGIKALVILKENAMHLGLSVEELARLPAFIVMNNL
                     HNAATEKASVVLPACGFAEKRGSMVNGKGRLQRLNRATRPPGNARDDWEILRDLLQAI
                     GGGDSLHSIEDVFRRMSETVPQFAGLSLSKIGDLGVHILEIAELPPMHPSDEEAIEQA
                     IAVQAARRGVRHKLDQAQAHPGSSTIRQVEPETAPRR"
     gene            4105..5079
                     /locus_tag="VIS53_08125"
     CDS             4105..5079
                     /locus_tag="VIS53_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HEY5767787.1"
                     /translation="MDSFFIITSLLKIAVLLGVILFMVSYAVYAERRVSAFIQDRVGP
                     NRVGPAGLFQPIADMFKLLLKEDFTPHATNTFYYWLAPCLAVMPALITIAVVPFGSTL
                     FGVPMVIADVNVGIFFVFALSSLGVYGIVIGGWASNSKYPFLGGIRSSAQMLSYELSL
                     GLAVIPVFLLVGSLRLTSVVQYQIDHGWFIAPFIGDWMNPWKWLLTIPMIISFLVFMI
                     AIFAETNRLPFDLPEAEQELAGGYNTEYSSMKFALYFLGEYAAMITGSAVVVTLFFGG
                     WHFPGIPDGSHGWFFGLINIAVFFTKVAVVIFLFMWCDGRSRDFDGIS"
     gene            5248..5778
                     /locus_tag="VIS53_08130"
     CDS             5248..5778
                     /locus_tag="VIS53_08130"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HEY5767788.1"
                     /translation="MTITVPRPRLNWRERMYLPAIAAGLAITFKHFKNTLLGRTKVTM
                     QYPEQKWDSHLPDHFRGAPALVRDTDGRVRCVACQLCEFICPPRAIKIIPGEIARSER
                     FAKVEKFPQEFDIDMIRCIYCGMCEEVCPEQAIYLRKDYAITGFTRADMIHHKEKLLE
                     IGGVMHGVVLKWNEKK"
     gene            5904..6377
                     /locus_tag="VIS53_08135"
     CDS             5904..6377
                     /locus_tag="VIS53_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY5767789.1"
                     /translation="MLTVIFGAAVVLNRNPVASALSLVVSFLGLSALYMSLDAFFVGI
                     IQVLVYAGAVMVLFLFIIMLLDIRVEERRQINWLAAVGGIGVAVILLLQIYVVIGHFQ
                     SARRTFPPLARSTTDDVWHIGQLLFGNYNLPFQIIGVLVLVATIGVVLLSRREPR"
     gene            6379..6699
                     /gene="nuoK"
                     /locus_tag="VIS53_08140"
     CDS             6379..6699
                     /gene="nuoK"
                     /locus_tag="VIS53_08140"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004211745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY5767790.1"
                     /translation="MITLGDYLVVSAILFTIGFAGVMLRRNLIVILMSLELMLNAANL
                     SLVAFSRFRVGANGLPDFNAQVYVFFVITVAAAEVAVGLALLVALYRARQTTDVADIT
                     SLKF"
BASE COUNT         1458 a         1815 c         1885 g         1547 t
ORIGIN      
        1 acacggtcac gatcgttttc aaggacgaca aagtgcagtc gaaggacagc acactctccg
       61 attgatccgc tgtgaggcag ccaatcctgt ctgccccaga ctcgcaggca ggattgcctg
      121 catcacgcta attcggccga gaccaacacg aaaggcgatt tgccgcgtat caatgcgctg
      181 gtttacgttc aacgatggca gacgcgacgc gcatcgaaat tcccgcagaa ttagagcgca
      241 aaatggacca tgcgattgcg cgttatccga gcgagcaccg tcgaagtgca gcgatgccgc
      301 tcttgcattt gtggcaggaa catttcgggt tcatcactga cgaagcaatc ttctggattg
      361 cgcaaaaact cggcctccaa ccgatcaaca ttctcgaggt ggtcacgttt tatccaatgt
      421 ttcgccagca tccggccggg aagacgcata tccgggtgtg ccgcacgctc agttgcgcga
      481 tggcgggagg actggaactg atggacaatt tgtgcgcgcc tctgggaatc cagcgctcga
      541 gtgatggtga ggaaatgcat aatccgatcg tggtcagcgc ggacggaaat tacagcgtcg
      601 aatttgttga atgtctggcc agctgccaca cggcgccagt gtgcatggtt ggcgaacaac
      661 tgcacgagcg tgtcgatcca aattccgctg cggatttctt acgcaatggg cgagcggcaa
      721 tcggcaattt gcaattgcca tggccgccgc atccgttgga acaccggttg gtctataaga
      781 atatcgggcg ccccggctgg acgagcgaca tcgagtgcta cctgcgcgac ggtggttacg
      841 aacaattaaa gcaagcgttg actctgtcac gcgaggacat cgtgaacaaa gtcaaaaact
      901 cgggactccg cggccgcggc ggggcgggat tctcctgcgg tttgaaatgg agctttatca
      961 agccggacga aaagcggccg gtgtatttga tttgcaacgc cgacgaatcc gagccgggca
     1021 cattcaaaga ccgctacatc attcacgaag atccgcacca gttgctcgaa ggaatgttga
     1081 tctcgtgtta tgcgctcaat gtccacaccg cctacatcta catccgcgga gaattcccgg
     1141 agggcgcaaa catcctcgag cgcgcaatcg aggaagcgca gcaacacaat ttccttggca
     1201 aaaacattct cgggtccgga ttcgatgttg agttctacct tcaccgcggc gcgggggctt
     1261 acatttgcgg cgaggaaacg ggtctgatcg aatcgctgga gggcaaacgc ggttatccgc
     1321 ggatcaagcc gccgtatttt ccagccgtgc tgggtctcta catgtgtccg accatcgtga
     1381 acaatgtcga gacactctgt aacattaaac atatcatggc catgggcggc gcagagtatg
     1441 cgcgcctcgg tcggcctaac aacaccggca cgcgagttct ctgcgtcagc ggcgacgtgc
     1501 agcgtccagg ctactttgaa gttgaagtcg gcgccgttac gatggggcag ctgatttacg
     1561 agatggccgg cggcttgcga ccggggcgaa aactaaaagc cgtcattcca ggcggcagct
     1621 ccgccaaagt gttgcgcgcc gatgagcgct tgaagctgaa ggaaagacag accgacggct
     1681 caacaattga acgcgaaatc gcaatcgacg atattccaat ggatttcgat tccctcgcgg
     1741 ccgcaggttc catggcgggt tccggcggcg tgatcgtgct ggatgattcg cgcgacatgg
     1801 tttgggcgct aaacaacatc aacaagttct acgcgcacga aagctgcggc caatgcacac
     1861 cctgccggga aggctcgctt tggatgcaaa aaatcaccga ccgcatgctg cgcggcggcg
     1921 gcgtggtcga agatccgaaa acactgaaaa cgattggcga taacatcgcg gggcgcacca
     1981 tttgcgcatt tggcgaagct tgtgcatggc caacgcaaag ttttgtccaa aaattcccgg
     2041 aagaatttgc gtcgcgcgcc cagaagccaa ttccaccacc cctcccgcct gagtacacat
     2101 ccgaagaatt aatcgaggaa gaatcgattc ccaccgtgcc catggcccac gaccccggct
     2161 gggaaaaagc cggggcaaaa ggaacaattt gaaatgaact ctcttactcg tgctcatgat
     2221 cataatcgtt ctccacattt ttcgattacg agcacgatca cgagcatgaa aatgtgatga
     2281 gtgacgcccc ttcagcgcct ccgctgttca acgtccaaat cgacggcgtc tggcatcagt
     2341 ttgcgaaggg cacacgggtg atcgaggcgt gcgagcgggt tggcattttc gtgccgcggt
     2401 attgctatca caagaagctg agctcgccgg gcaattgccg gatgtgtttg atcgaaatgg
     2461 gatttccgag gctcgggccc gatcgcaagc cggagcttgg cgccgacggc aaaccgatca
     2521 tcaactggat gccgcgcccg caaatttcct gcgcacagga cgtagccgaa ggcatggccg
     2581 ttcgaaccga ctcaccgctg gtgaaggaat gtcagcgggg cgtcatggaa tttctcctca
     2641 tcaatcatcc gctcgactgt ccgatctgcg atcaagccgg cgaatgccgt ttgcaggagt
     2701 tcagtgtcga ctatggcagt tcgcaatcgc gtttcctgga gaacaaagtg aaaaagccga
     2761 aagcggtgca gctcggccca cgcgtgacgc ttgatgacga gcgctgcatt ctctgctcgc
     2821 gctgcatccg tttttgccag gagatcgcgc atgacgacgt cctcggcttc gttgaccgcg
     2881 gcagtcacac aatcctaacg gcgcatcctg gcaggtcttt ggaaaacaat tattcgctta
     2941 acaccgtcga catttgcccg gtgggcgcgc tcacttcgac cgatttccgc ttcaaaatgc
     3001 gggtctggtt cctgaaagaa acgaagagca tctgcacaag ttgcgcgacg gggtgcaata
     3061 caatcatcgg aactcgggag gacgtcgtct atcgccaaac gccgcgcgag aacgattacg
     3121 ttaactcctg ttggatgtgc gattatggcc gcctcaatta caaatatctt gaagccgacg
     3181 gccgcttgct ggagccgcag attcgttccg ggggaagact ggtcccggcc gattggccaa
     3241 ctgcggttgg gcaagctgcg ctccatttaa aacagtttgc cgactccgag attgcaatcg
     3301 tcgcttcggg gcggatgacc aacgaagagc tttggctcac ggcgcagttg gttagctcgt
     3361 taggcgttaa atgggtcgat attgtcccga ggcgcggtcg cgcagacaag attttgttaa
     3421 gtaaagatcg caacgcgaac acaaacggcg cccggctgat cctgggttca cgctcggcgc
     3481 ccggcgcaaa gctcatggcc attgccgacg cggtaagatc cggagggatc aaagcgctgg
     3541 tgattttaaa agagaacgcg atgcacctgg gcctgtcggt cgaagaactc gcgcgactgc
     3601 ccgcattcat cgtgatgaat aatttgcaca acgcagcgac agaaaaggcg agcgttgtcc
     3661 tgcccgcatg cgggttcgcc gaaaaacgcg gctctatggt caacggcaaa ggccgtttgc
     3721 aacgcttaaa ccgagcgact cgcccgccgg gcaatgctcg cgatgattgg gagattttac
     3781 gcgaccttct tcaggcaatc ggtggcggcg actcgcttca ttcgattgaa gatgttttcc
     3841 gccggatgag cgaaacagtc ccacaattcg ccgggttgag tctaagcaaa atcggcgatc
     3901 tcggcgtgca cattctggag attgcagagt tgccgccaat gcatcccagc gacgaagaag
     3961 caatcgaaca agcgatcgcg gtgcaggctg cacggcgcgg tgttcggcac aagttagatc
     4021 aggcgcaagc tcatcccggt tcatcgacga ttcgacaagt cgaaccagaa acggcgcctc
     4081 ggcggtaaaa cattgacgac cgccatggac tcttttttca tcatcacctc gctactgaaa
     4141 atcgcagttc tgctgggagt gatcttgttc atggtatctt acgcagtgta cgcggagcgc
     4201 cgggtcagcg cgtttattca ggaccgcgtt gggcccaatc gcgtggggcc cgccggcctt
     4261 ttccagccca ttgccgacat gttcaagttg ttgctgaaag aagatttcac accacacgct
     4321 acgaatactt tttactactg gctggcgccg tgcctcgctg tcatgccggc cctcatcacg
     4381 atcgcggtgg tgccgttcgg cagcacgctg ttcggtgtgc cgatggtgat tgcggacgtg
     4441 aacgtcggaa tcttctttgt gttcgcactc tcatcgttag gcgtttacgg aatcgtcatc
     4501 ggcggttggg cttccaattc gaaatatccc tttctcggcg gcattcgttc cagcgcgcaa
     4561 atgctttctt acgaactctc gctcgggctc gctgtcattc cggtcttcct cttggttgga
     4621 agtttgcgac taacgagcgt tgtgcagtac caaatcgacc acggctggtt tattgcgcct
     4681 ttcattggcg attggatgaa tccatggaaa tggctgctca ccattccaat gatcatctca
     4741 ttcctggtgt tcatgatcgc cattttcgct gaaacgaacc ggctgccatt cgatttgccg
     4801 gaggcggagc aagagctggc cggcggttac aacaccgaat acagctcaat gaagttcgcg
     4861 ctttattttc tcggcgaata cgctgcgatg atcaccggat ccgctgttgt cgtgacgtta
     4921 ttttttggcg gctggcattt ccccggcata cccgatggct cccacggatg gttctttggt
     4981 ctgatcaaca tcgcagtctt tttcacaaag gtcgccgtcg tgattttctt gtttatgtgg
     5041 tgcgatggac gctcccgcga tttcgatggg atcagctaat gcggctgggg tggcttttct
     5101 ttttcgaaat tgcgttggtg aacatttttc tggtggcggg aattctcgct tactttccga
     5161 aatgaatctt atcatgctca tactcctgct catgctcggc agggacggtt tataatcatg
     5221 agcaagagca tgaacgtgag ttaaagcatg accattactg ttccacgacc gagattgaac
     5281 tggcgcgagc gaatgtatct gccagccatt gccgccggtc tggcgatcac gtttaagcat
     5341 ttcaagaata cgctgctcgg acgcaccaag gtgacgatgc aatatcccga gcaaaaatgg
     5401 gacagtcacc tgccggatca tttccgcggc gcccccgcgc tggtgcgcga cacggatgga
     5461 cgagtgcgct gtgttgcgtg tcaactttgc gaattcattt gtccgccgcg cgcgatcaag
     5521 attattcccg gcgaaattgc gcggtccgag cgtttcgcga aggtcgaaaa atttcctcaa
     5581 gaattcgata tcgacatgat ccgctgcatt tactgcggca tgtgcgagga agtttgtcca
     5641 gagcaggcca tttatctgcg caaagattac gccattaccg gcttcacgcg agccgacatg
     5701 atccatcaca aggaaaaact cctcgagatc ggcggggtaa tgcacggcgt ggtgctcaaa
     5761 tggaacgaaa aaaagtagga gccacggatt aacacggata gtgatggata atcacggatt
     5821 ttggattccg atttacatcc gtgttcgatc cgtgttcatc tgtggcctga aaaatgtccc
     5881 ctttcctatt ctggattttt gcggtgctga cggtgatttt cggcgcggct gtcgtcctta
     5941 atcggaaccc ggtcgcgagc gcgctcagtc tggttgtttc attcctcggg ttatcagcgc
     6001 tgtacatgtc gctcgacgcg ttttttgtcg gcatcattca ggttctggtt tatgcaggcg
     6061 cggtgatggt acttttccta ttcatcatca tgctgctcga tatccgcgtc gaagaacgac
     6121 gccaaatcaa ctggctcgcc gccgtgggcg gtattggggt ggccgtgatc ctgctgcttc
     6181 agatctacgt tgtcattggg cactttcaat ctgcgcgacg cacttttccg ccgcttgcaa
     6241 gatcaactac ggatgacgtg tggcacatcg gacagctact gtttggcaac tacaatctgc
     6301 cctttcaaat catcggcgtc ctggtgctcg ttgccacgat cggggtggtc ctcctgagcc
     6361 ggcgggaacc acggtaatat gatcacgctc ggcgattatt tggtcgtaag cgcgatcctt
     6421 ttcacgatcg gtttcgccgg cgtgatgcta cgtcgaaatc tcatcgttat tttgatgtcg
     6481 ctcgagctaa tgttgaacgc ggccaacctg tcgctcgtgg ctttctcgcg atttcgtgtc
     6541 ggtgccaacg ggctgccaga ctttaacgcg caggtgtacg tctttttcgt catcacggtg
     6601 gcggcggctg aagtggcggt ggggcttgcg cttctcgtcg cgttatatcg cgcgaggcaa
     6661 acgaccgatg tcgccgacat caccagcctg aagttctaac ccgcg
//
LOCUS       DATDAJ010000327         2876 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1893957, whole genome shotgun sequence.
ACCESSION   DATDAJ010000327 DATDAJ010000000
VERSION     DATDAJ010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2876
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893957"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VIS53_08145"
     CDS             complement(<1..898)
                     /locus_tag="VIS53_08145"
                     /inference="COORDINATES: protein motif:HMM:NF013044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY5767791.1"
                     /translation="MGLSIREIIATYNPDAHLSEGSTPPSSWYTDPRILELEQKTVFS
                     QSWQFVGRTNQLGDPGNYIICDVAGEPIVVVVGNDNVLRGFFNVCRHHAAAVMTKSEG
                     RTENLRCPYHGWTYNLEGALILTSEFGGVANFDRAANGLVPVQTAVWQNWVFVKLTSG
                     NLSLEDFLDKDLIGRLERLNLEQLRWFERRHYTVNCNWKVFVDNYLDGGYHVPHIHGG
                     LNGVLDYSNYKIETGERFCVQSSPIVSNVGEGKTAEVRNGEREFYYWIYPNLMINIYH
                     GVMDTNLVIPRGIDRTEVIFDYY"
     gene            complement(945..1922)
                     /locus_tag="VIS53_08150"
     CDS             complement(945..1922)
                     /locus_tag="VIS53_08150"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY5767792.1"
                     /translation="MSKRVAFPLFFSFALFVITPGTSRGIQEIKIASTGPGVSTLPLE
                     MATRKGFFRDEGLDVLTITMRTNIAVNALLTRSVDYATPSTSAIKAATAGLPVKLIAV
                     LLGRPDYFLTVKKEIRSLKDLKGKRVAIGTFGAAADLALRTVAKQDGLDPDRDLIRLQ
                     MGGAASRYASLIAGSVDATILTLPYNLQAEKAGYKDLLWFGERMELPLSGLVARDETI
                     QKNPKQVLAVVRAVFRAMSFAGANREETTQIIVNWLKVDQEVAAKSYDLGKNSWSAGG
                     IVSDAAVKVLVDQAILEIKGKDTVPLDKVRTWSFAEQARRELANAGIAR"
     gene            complement(1957..2313)
                     /locus_tag="VIS53_08155"
     CDS             complement(1957..2313)
                     /locus_tag="VIS53_08155"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5767793.1"
                     /translation="MEFANINDTMRTAKDEEKRFIPLFGSETFRSWILYFRPGEHTDM
                     HFHMSPETFLVLEGKASVRGLKGEERIIEKNEIVFFGAKDYYQITNVGTEPLVLVGNR
                     SESFGGAHVTAEEKPS"
     gene            complement(2385..>2876)
                     /locus_tag="VIS53_08160"
     CDS             complement(2385..>2876)
                     /locus_tag="VIS53_08160"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5767794.1"
                     /translation="RGHDPDGNQYDLSQKGMANVREGYVEFGWEQPRWINHVCIRSGR
                     PAHIAEFYQKVFDLQPVEGMSGDNSYYLTDGKVNLAIRPWDMIQYRGHMAGLDHFGFK
                     VDDLAQTKKDLDALAASSPASAPRKIAIGREGETRQKNLEGCKLCKQSLADPDGVLLD
                     LTD"
BASE COUNT          603 a          783 c          795 g          695 t
ORIGIN      
        1 agtagtaatc gaagatgact tcggttcggt caatgccgcg cgggatgacg agattcgtat
       61 ccatcacgcc gtggtagatg ttgatcatga gattcggata gatccagtaa tagaattcgc
      121 gctctccatt gcggacttcg gcggttttac cttcgccgac atttgaaacg atcgggctcg
      181 actgcacaca aaaacgctcg cccgtttcga tcttgtagtt gctgtaatcg agcacgccgt
      241 tcaagccgcc atgaatatgc ggcacgtgat agccaccgtc gaggtaattg tcgacgaaga
      301 ctttccagtt gcagttgact gtatagtggc ggcgttcgaa ccatcttaat tgttcgaggt
      361 tcaagcgttc taaacgtccg atgagatcct tgtcaagaaa atcttcgagt gacagatttc
      421 cagacgtgag ctttacgaac acccagttct gccagaccgc agtttgaacc ggaacaagcc
      481 cgttcgcggc gcggtcgaaa ttggcgaccc cgccaaattc tgaggtaaga atcagcgcac
      541 cttccagatt gtacgtccag ccgtggtagg gacagcgcag attctctgtt cttccctctg
      601 atttcgtcat tacggctgcg gcgtgatgac ggcagacgtt gaagaagcca cgcagaacat
      661 tgtcatttcc tacaacgacg acgattggct cgccggcgac atcacatatg atgtagttgc
      721 ctggatcgcc cagctgattg gtgcgaccga cgaactgcca cgactgcgaa aagaccgttt
      781 tttgctcgag ttcgagaatg cgaggatctg tgtaccaaga tgatggcggg gttgacccct
      841 cacttaaatg agcatcggga ttataggttg cgatgatttc tcgaatcgaa agtcccattc
      901 tgctccggcc tacctatcca tcgacctgcg aatacgagag gcgcttatcg cgctattcct
      961 gcgttcgcca actcccgccg cgcttgttcg gcgaagctcc aggtacggac tttgtcgagc
     1021 gggacggtgt ctttaccctt gatctccaat atcgcttgat cgaccaatac cttcaccgct
     1081 gcgtccgaga cgattccgcc ggcggaccaa ctgtttttgc cgaggtcgta acttttggcg
     1141 gcgacttcct ggtctacttt gagccagttg acgattattt gcgtggtttc ttcgcgattg
     1201 gcgcctgcaa agctcatggc gcgaaagacc gcgcgcacga ccgcgagaac ttgctttgga
     1261 tttttttgaa tagtttcgtc gcgggctaca agcccggata agggcaattc catgcgctcg
     1321 ccgaaccaga gcaagtcttt gtaaccggcc ttttccgctt gcaagttata cggcagcgtt
     1381 aaaatcgttg cgtctacgct tccagcgatc agagaagcgt agcgagaagc ggctccgccc
     1441 atctgtaaac gaatgagatc gcgatcgggg tccaagccat cctgtttcgc gaccgtgcgc
     1501 agcgccaaat cggcggcagc gccgaaagtg ccaatggcaa cgcgtttacc cttcaaatcc
     1561 tttagcgatc taatctcttt ctttaccgtg agaaagtaat cggggcgccc caacaataca
     1621 gcgatcaatt tgaccggcaa tccggcggtg gcggccttga tcgccgaagt gctcggcgtt
     1681 gcatagtcga cgctgcgggt tagaagcgcg ttgaccgcga tattcgttct catcgtgatc
     1741 gtcagaacat cgaggccctc atcgcggaaa aaaccctttc gtgtggccat ttcgagcggc
     1801 agcgtgctga cgccgggacc cgtcgaggcg attttaattt cctgaatgcc gcgcgatgtc
     1861 ccgggcgtaa ttacgaatag ggcgaacgaa aagaacaggg gaaacgcgac acgcttgctc
     1921 attccggcac gcggctcttc gtgcggtttt cggaggctat gaaggctttt cttcggcggt
     1981 cacgtgggca ccgccgaaag actcggaacg gttgcccacg agcaccagcg gttcagtgcc
     2041 gacgttggtg atctggtagt agtccttggc gccgaaaaag acgatctcgt tcttttcgat
     2101 gatgcgctcc tcgcctttta gccctctgac cgacgccttg ccctcgagta cgagaaaggt
     2161 ttccggcgac atatggaaat gcatgtcggt gtgttcgccc ggccggaaat agagtatcca
     2221 ggagcgaaac gtctctgagc cgaagagcgg aataaatcgt ttctcttcat ccttggccgt
     2281 gcgcatggtg tcattgatgt tggcaaattc catgaatcct cccaagcttt gtgtctttcg
     2341 gccaagttgg acgcttccac gccggttggc aactccacga tatctcagtc cgtcaaatcc
     2401 agcagcacgc cgtccggatc ggcgagactt tgcttgcaca gcttgcaacc ttcgaggttt
     2461 ttctggcgcg tttcgccctc gcggccgatg gcgatttttc tcggcgcgga agcgggcgag
     2521 gaggcagcca gggcgtcaag atcctttttc gtttgtgcta aatcgtcgac cttgaaaccg
     2581 aagtgatcta ggcccgccat gtggccgcgg tattggatca tgtcccaagg acggatcgca
     2641 agattcactt taccgtcggt aagatagtag ctgttgtcgc cggacattcc ctcgacgggc
     2701 tgcaaatcga aaactttctg atagaactcg gcgatatgcg ccgggcggcc gctgcggatg
     2761 cagacgtgat tgatccagcg cggctgttcc cagccgaatt cgacgtagcc ttcgcgcacg
     2821 ttggccatgc ctttttgcga aaggtcgtat tggttgccgt ccgggtcgtg gccgcg
//
LOCUS       DATDAJ010000328         2840 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1898554, whole genome shotgun sequence.
ACCESSION   DATDAJ010000328 DATDAJ010000000
VERSION     DATDAJ010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898554"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1266)
                     /locus_tag="VIS53_08165"
     CDS             complement(34..1266)
                     /locus_tag="VIS53_08165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767795.1"
                     /translation="MSTANAKRLAIAAIASSIAIPSLAQNTPTPADPPRDLTVLILGD
                     SLGLCGFGKRLDQKFRADPRVKSVFTYCTCGTNPLSWLKEKPFTHIQTHCGYWSIESQ
                     PDAHAAKELHDTYGMTSGHRPTSHLVPKLDDLLATIQPDILVMQTGGNLFGLFSGREK
                     VKPDRDGPMLRKYLVPFVKKAITPPSKLRKIYWVAPPKSGRVSDEVQEFVFEQTQKDI
                     GSVTQLIDSRKLVAYPYKHMDPDKEHFAGEDMNRWTDKVWGEIDRDLSAQAWSDVRPL
                     SESIAKLAPVAAPSATPAEASLIVKAKLVSKTTPIRREELMPYQEFLVGFVYDVEGVI
                     AGEYGEKQILVMHPAYIGLQPQSLGKFRIGRSYELQLRALDGSIWSTIKSKDDSGRIE
                     LEPYILVQDEARYPKSAR"
     gene            complement(1269..2285)
                     /locus_tag="VIS53_08170"
     CDS             complement(1269..2285)
                     /locus_tag="VIS53_08170"
                     /inference="COORDINATES: protein motif:HMM:NF028132.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767796.1"
                     /translation="MSIPKVFAGDSIPLSDSHQKFVNELVAKSRSAESKHAAVITGAD
                     GWFFLSSDIRFLSVGQFWGADAAKVSRAHKPESADPIPAIVDFHDQLKRRGIALLLMP
                     VPPKAAIYPEKIVPDVDLHGETAAPFLARFYDELRKREIDVVDFAPVFLQNRAEEHGP
                     VFCKTDTHWSGFGCVLAAQTIKEKIHEKLAGQPRKDYAAEWKETTIKGDLGDLAGPDA
                     KKIEPEKIAIRTISDKETGAAINPDPNSPLLIIGDSHTLVFHDFLAEKSGLLDQVAYE
                     NGFAPDLIGTRGSGATSVRVSLYRRTRKDPGYLAKKKVIVWCFAAREFTESDQGWDKV
                     PVGQ"
     gene            2465..>2840
                     /locus_tag="VIS53_08175"
     CDS             2465..>2840
                     /locus_tag="VIS53_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767797.1"
                     /translation="MVFSSHIFIYYFLPFALLVYYALFRARQRWRNAWLIVAGYTFYG
                     WAEPRFIVLMFGTTFIDWLMSLVIAHNTWQVWRVWRQPVKIVDPEQRKTRVRRTAITI
                     SIVSNLIVLGFFKYFNFGIDSYN"
BASE COUNT          599 a          786 c          750 g          705 t
ORIGIN      
        1 aaaaccgcgc gaatcattgg tgaccaatgt ttcttatcgc gcgctcttgg ggtatcgcgc
       61 ttcatcctgc acgagaatgt agggttccag ctcgatccgg ccggaatcgt ccttcgactt
      121 tattgtactc caaatcgagc cgtctaacgc gcgcaactga agctcgtagc tccggccgat
      181 tcgaaatttc ccgagcgatt gcggctgcag gccaatgtaa gccgggtgca tcaccaggat
      241 ttgtttctcg ccgtattcgc ccgcaatcac tccttccaca tcataaacaa atccgaccag
      301 aaattcctga tacggcatta attcctcccg ccgaatcggt gtcgttttgg aaacgagttt
      361 cgcttttacg atcaacgacg cctccgcggg cgttgcactc ggcgcggcca cgggcgcgag
      421 tttcgcgatt gattcgctga gtggccgcac atccgaccat gcctgcgcgg agagatcgcg
      481 gtcgatctct ccccacacct tgtccgtcca cctgttcatg tcttcgccgg cgaaatgctc
      541 cttatccgga tccatgtgct tgtagggata ggcgaccagt tttcgactat cgattaactg
      601 cgttacgctg ccgatgtctt tctgcgtttg ctcgaacacg aactcctgaa cttcgtctga
      661 aacgcgtccg gacttgggtg gcgcaaccca gtaaattttt cgcaacttcg acggcggcgt
      721 aatcgctttt ttgacgaacg gcacgaggta ttttcgcaac atcggcccgt cacggtccgg
      781 ctttactttt tcgcggcccg aaaacaagcc gaacaggttc cctccggttt gcataacgag
      841 tatatctggc tggattgtgg cgaggaggtc gtccagcttc ggaactaggt gcgatgtcgg
      901 acgatggccg ctcgtcattc cataagtatc gtgcagttcc ttggcggcat gcgcatccgg
      961 ctgcgattca atgctccagt aaccacaatg cgtctgaatg tgcgtgaagg gtttctcttt
     1021 cagccaactc agcggattcg tgccgcacgt acaataggtg aaaactgatt tcacccgcgg
     1081 atccgcgcgg aatttttggt cgagccgttt gccgaatcca cacaacccga gcgaatcgcc
     1141 gagtatcaat acggtgagat cgcgcggtgg atcagccgga gttggagtgt tttgcgcaag
     1201 agaagggata gcgatgcttg acgcaattgc cgcgatggct agccgcttgg cgttggccgt
     1261 tgacattctt actgacctac aggcactttg tcccagccct ggtctgactc ggtgaattcg
     1321 cgcgcggcga aacaccagac gatcactttt ttcttagcga gatagccggg atctttccgt
     1381 gtgcgccgat acagactgac ccggaccgac gtagcgcccg agccgcgcgt gcctatcaaa
     1441 tcaggcgcga agccgttctc gtacgctact tgatcaagca aaccggattt ctccgcaaga
     1501 aaatcgtgga acacgagcgt gtggctgtcg ccaatgatca acaacgggct gttcggatca
     1561 ggatttattg ccgcgcctgt ttctttatca ctgatcgttc ggatcgcgat tttttccggc
     1621 tcgatctttt ttgcatcggg tcctgcaaga tcgccaaggt cgcctttgat cgtggtctct
     1681 ttccattcgg ctgcgtaatc ttttcgtggc tggccggcga gtttctcgtg aattttctcc
     1741 ttgatcgttt gtgctgcgag aacacagcca aatccagacc aatgcgtgtc ggttttgcaa
     1801 aaaaccgggc catgctcctc ggcgcggttt tgaaggaaga ctggcgcaaa atcgactacg
     1861 tcaatttcgc gtttcctcag ctcgtcataa aatcgcgcaa ggaatggagc cgccgtttca
     1921 ccatgaagat cgacatcggg cacaattttc tccgggtaaa ttgctgcctt gggcgggacc
     1981 ggcattagca gtagcgcgat tccccggcgt ttcagttgat catgaaagtc gacaatcgcc
     2041 ggaatcggat cagccgattc cggtttatgt gcccgactga ctttcgccgc gtcagcgccc
     2101 cagaattggc cgaccgagag aaatcgaata tcgctggaaa gaaaaaacca gccatccgca
     2161 cccgtgatca ctgccgcgtg tttgctttca gccgagcgtg atttcgccac cagttcgtta
     2221 acgaatttct ggtgcgaatc ggacagcgga atcgaatcac ccgcgaagac tttcgggata
     2281 gacaaacaag tgagaatagc ggcgtaaaaa cacaaagtgc ggcggaagct aagagcttcg
     2341 ggtgcactgc tctccggcag tgcgagcgct gtccaacacc cgcgaacgcc tgataagaat
     2401 ggtgtcgact tcaagaggag tttttctata accgtgttgc ggaaaaaatc accaaatatc
     2461 gagcgtggta tttagctctc acattttcat ctactatttt ctgcctttcg cgctgctcgt
     2521 ttattacgcg ctgtttcgcg cgcggcaacg ctggcgcaac gcctggttga tcgttgccgg
     2581 atacacattt tacggctggg ccgagccgcg gttcatcgtg ctgatgttcg gcacaacgtt
     2641 tatcgattgg ctcatgagcc tggtcatcgc acataacacc tggcaagtgt ggcgagtctg
     2701 gcgtcagccg gtgaaaattg tcgacccgga gcagcgcaag acgcgcgtcc ggcggacggc
     2761 aatcacgatc tcgatcgtct ccaatctaat tgtcctgggt tttttcaagt acttcaactt
     2821 cggcatcgat agttacaact
//
LOCUS       DATDAJ010000329         2467 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1901693, whole genome shotgun sequence.
ACCESSION   DATDAJ010000329 DATDAJ010000000
VERSION     DATDAJ010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1901693"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1137
                     /locus_tag="VIS53_08180"
     CDS             <1..1137
                     /locus_tag="VIS53_08180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching enzyme GlgX"
                     /protein_id="HEY5767798.1"
                     /translation="TLHPFFQVIQQDPVLSQVKLIAEPWDVGEGGYQVGNFPPAWSEW
                     NGKYRDSVRGFWKGDEGRIGDMAYRLTGSPDLYEHHGRRPYASINFVTVHDGFTLTDL
                     VSYNEKHNELNNDNNRDGDNNNQSWNCGVEGPTEDPQINELRDRQRRNFFTTLFLSQG
                     VPMLCGGDEWGRTQDGNNNAYCQDNEISWFNWEHDEKQNRFFEFTRKLIHLRKEHPVF
                     RRPKFLKGRRIPGSEIRDVMWFNPGGSQMTEEEWTSPFVRCLGMLLSGDATDVLDFEG
                     ESVRDDTFLLLINAHYEPISFVLPGQEHLEWQLILDTSDAAGFVAEPKRFASGDDVDL
                     GGRACCLLQLVGGTQAQAREESWKKRPVEFPRFTAEEERARRNG"
     gene            1260..1727
                     /locus_tag="VIS53_08185"
     CDS             1260..1727
                     /locus_tag="VIS53_08185"
                     /inference="COORDINATES: protein motif:HMM:NF021621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEY5767799.1"
                     /translation="MTPSSLVIVTDRGSLKAYRVNETPTRGPSLQLVQAFDMTDAHGR
                     LIDKVSDSAGRFPVTEGAGAHRGPASIAERTQLATETDRRIQKELADQIAKIVWQNGK
                     DGWSFAAPAEIHAAIVDLLPADVRQRIVEHVKSDLVKVEPARLISHFRSLRQI"
     gene            1792..2157
                     /locus_tag="VIS53_08190"
     CDS             1792..2157
                     /locus_tag="VIS53_08190"
                     /inference="COORDINATES: protein motif:HMM:NF014534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPF/RaiA family ribosome-associated protein"
                     /protein_id="HEY5767800.1"
                     /translation="MQLPVKISYRGLEKSDQIDNLVLDYAERLERFCDHINRCDVAIE
                     QTNHNHNKGNPYRCRIDVTVAPRHELVADERQTDNGTHEPLKKVIHDAFKTMERELRR
                     VVDKQRHDIKTHADTRSPK"
BASE COUNT          619 a          629 c          691 g          528 t
ORIGIN      
        1 acgctccatc cgtttttcca agtaattcag caggacccgg tgctctcgca agtgaagttg
       61 atcgcagaac catgggatgt cggcgaaggc ggctatcagg taggcaactt tcccccggcc
      121 tggtcggaat ggaacggcaa atatcgcgac tcggtccgcg gtttttggaa aggcgacgaa
      181 ggccggattg gtgacatggc ctatcgactt accggaagcc ctgatctcta tgaacatcac
      241 ggacggcggc cttacgcgag catcaacttc gttacagtcc atgatggatt cacactgacc
      301 gatttggtca gctacaatga aaagcacaat gaactgaaca acgacaacaa ccgcgacggc
      361 gacaacaata atcagtcgtg gaattgcggc gttgaaggtc cgaccgagga cccgcagatt
      421 aacgagttgc gcgaccggca gcgccgcaat tttttcacca cactgtttct ttcccaaggc
      481 gtaccgatgc tctgcggcgg agatgagtgg ggtcggacac aagacggcaa caacaatgct
      541 tattgtcagg acaacgagat cagttggttt aactgggagc atgacgaaaa gcagaatcgg
      601 ttttttgagt tcacgcgaaa attgatacat ctccgaaaag aacatccggt ttttcggcgc
      661 ccgaagttcc taaaaggtcg ccgcatcccg ggctcggaga ttcgagatgt gatgtggttc
      721 aatcccggcg gcagccagat gacggaggaa gaatggacgt cgcctttcgt gcgctgtctc
      781 ggcatgttgc tgagtggcga tgcaaccgat gtgctcgact tcgagggcga atcagttcgt
      841 gacgacacct ttctgctatt gatcaacgcg cattacgagc ccatctcctt tgtcttacct
      901 ggccaggaac atctcgaatg gcaattgatt ctcgacacga gcgacgccgc aggttttgta
      961 gcggagccga aaagatttgc ctccggcgat gatgtcgatc tcggcgggcg agcgtgttgt
     1021 ttgctgcaac ttgtcggcgg cacgcaagcg caggcgcgcg aggaatcctg gaaaaagcgg
     1081 cccgtcgaat ttccccggtt taccgccgag gaagaacgcg cgagacgcaa tggctaagta
     1141 atacggttct catatgcgaa gcacacaagt ttcgagcaag cgcgatgttg caaccgccaa
     1201 cgattgtatt tatagaggta gcagacatgt gcgcgggcac gcgccgccag tgatttgcca
     1261 tgacaccgag ttctcttgtg atcgtcactg atcgcggcag cttgaaagcc tatcgggtaa
     1321 acgaaacgcc gacgcgcgga ccgagcctgc agctcgtgca agcatttgat atgactgacg
     1381 cgcacggaag actcatcgat aaggtaagcg actcggccgg gcgctttccg gtaacggaag
     1441 gcgcgggtgc tcaccgcgga ccggcgtcaa ttgcagagcg cacgcaattg gccacggaaa
     1501 cggaccggcg aattcaaaaa gagttggctg accaaatcgc gaaaattgtt tggcaaaacg
     1561 ggaaggatgg ctggtcgttt gcggcgcctg ctgaaatcca cgccgcgatc gtagatttgt
     1621 tgcctgccga tgtgcggcag cgaattgtcg aacatgtgaa atcggatttg gtgaaggtcg
     1681 aaccagccag actgatcagt cattttcgat cgttgcggca aatttaaatg aatgctggca
     1741 ccgcgatttt ttgttccctc aacggcgagt agccgtagta tctaagtaat catgcaactg
     1801 cctgttaaga tatcgtaccg gggtctggaa aaatctgacc agatcgacaa tctcgttttg
     1861 gattatgcag aaagactcga gagattttgt gatcacatca accgctgcga tgtcgcaatc
     1921 gagcaaacca atcacaacca taacaaaggc aatccatacc ggtgccgcat cgacgtcact
     1981 gtggcaccac ggcacgagct tgtggccgat gaaaggcaga cggataatgg aactcacgaa
     2041 ccgctcaaaa aagtcatcca cgacgcattt aaaaccatgg agcgcgaact gcgtcgcgtt
     2101 gtagacaagc aaaggcacga cattaaaacc cacgccgaca cgcgttcgcc gaaataatcc
     2161 ggcttccaag gcgaaacgaa gcgttcttaa gatgttggca gcggggtcag cttgacgctg
     2221 agaatgagtt cgtggccgga tgctgcaact ctcttttagg agttgccgta gctgtggtgc
     2281 ggtttcgcat ttccggatga tttgaccgaa agtcgcggca ggaacgaaga taagcccgac
     2341 tgatgcatat caccgagatc atgcggggac attctcctac gttttcgttc gagttctttc
     2401 ccccaaggac gccagaggcc gcagagacgc tttatcagac gattcgcgat cttgagttat
     2461 acatgcc
//
LOCUS       DATDAJ010000330         4060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1906078, whole genome shotgun sequence.
ACCESSION   DATDAJ010000330 DATDAJ010000000
VERSION     DATDAJ010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906078"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..824)
                     /locus_tag="VIS53_08195"
     CDS             complement(156..824)
                     /locus_tag="VIS53_08195"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767801.1"
                     /translation="MQPVSTSFYSMWDAVARFAKEIRASEFMSDMISRRDAYGSEGVM
                     GALDCATLYGLTRWLRPMVLVESGGFIGMSSAFILKALADEKLPTSKLYSIELSEDCE
                     QGALIPEELRSSLGFMPMCGRIEDFLKGDQLPRSIDMFLHDSSHSYQHMLWEFRQFWP
                     RLRDGGLLVSHDVQMNAAFPEFVTKTYAHEKKTGRRDEQRTSHYEWGRWGYIGFALKK
                     GGTA"
     gene            1040..1357
                     /gene="xseB"
                     /locus_tag="VIS53_08200"
     CDS             1040..1357
                     /gene="xseB"
                     /locus_tag="VIS53_08200"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF002140.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY5767802.1"
                     /translation="MSSKTKPREAELNFEGAMDRLEKIVEQMESGKLPLEDLIVRYEE
                     GMKLVKICQERLANAEQKIEIITRNSTGKAVVQEFEPSQEAGPPEKAAIESESTDDEI
                     KLF"
     gene            1335..3281
                     /gene="dxs"
                     /locus_tag="VIS53_08205"
     CDS             1335..3281
                     /gene="dxs"
                     /locus_tag="VIS53_08205"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF003933.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY5767803.1"
                     /translation="MTKSNSSENPQTTEMTDAPKRLLDGIRSPADIKALREQDLPQLA
                     QEVRDELIKVLSQTGGHLGPNLGVTELTIALHRVFDTPSDRIVMDVSHQGYVHKMFTG
                     RLERFHTMRQFGGLNGFLLRTESEHDCYGAGHAGTALSAALGMAVGRDLRGGDENIVV
                     VAGDAAFTCGISYEALNNVKTHTKRFIVVLNDNEWSIAKNVGAIANYLNSIVANPTYA
                     HLHDKARDFVQAILGKTGVQLAHKVEESVKGLLVPSVIFEELGLRYYGPIDGHDIPLL
                     IRTFEFLKTQEEPVLLHILTKKGKGYEPAIKQPDKFHGLGKYKIESGETAPTATPTYS
                     EIIGKTLAKFADTNQKLVAITAAMPSGTGLSHFAKAHPTRYFDVGIAEEHAALFACGL
                     ATQGLTPFLTIYSTFFQRAYDMAIHDMAIQKLNVRLCMDRAGLSGDDGPTHHGLFDIG
                     YLRHIPNWVHMQPKDEDEFVDMLWTMAHYNSGPIAVRYPRGPGTGAQIKSEPKLLEIG
                     KAEVVQHGREVAIFGLGNMFEVAEEAARKLEEKGISVALINPRWIKPMDTGTLEFFAR
                     SVDVVCTIEDHVLYNGFGCAVMEHLHSQMINTPVVRIGWPDQFIEHGAVPILRKKHGI
                     TADALVEKVLPLLRKKSKLTPSVA"
     gene            complement(3323..3724)
                     /gene="rnpB"
                     /locus_tag="VIS53_08210"
     ncRNA           complement(3323..3724)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VIS53_08210"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(3881..>4060)
                     /locus_tag="VIS53_08215"
     CDS             complement(3881..>4060)
                     /locus_tag="VIS53_08215"
                     /inference="COORDINATES: protein motif:HMM:NF016213.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 family protein"
                     /protein_id="HEY5767804.1"
                     /translation="FVGPVIGAIIGEVIAGKRMIDAGRAGWGSLLGNIGAMLAKLIIA
                     LAMIIIFLVNVPSPF"
BASE COUNT          979 a         1134 c         1099 g          848 t
ORIGIN      
        1 aagcagcctc gaattttttt gaaaaacagc cggcgtcgta tcgaaaaatg attggctggt
       61 ggattatcag cgcgaagaaa gaagaaacgc gaatggctcg cctggcaaaa ttaatcagcg
      121 agactgcaaa aggaaaatgc gtgcttcaat agcgatcagg ctgttccgcc tttcttaagc
      181 gcgaagccga tgtagcccca cctgccccat tcgtaatgag aggtgcgctg ctcatcgcgg
      241 cggccagtct ttttttcgtg cgcgtacgtt tttgtgacga attcaggaaa cgcagcgttc
      301 atctgcacat catgagacac gagtaaccca ccgtctcgta ggcgcggcca gaactggcga
      361 aattcccaga gcatgtgctg atagctatgc gagctgtcgt gcaagaacat gtcgatggac
      421 cggggtagct ggtcgccttt gagaaaatct tcgattcgac cgcacatcgg catgaatcca
      481 agcgaagatc gcagttcctc gggaatcagc gcgccttgct cgcagtcttc gctcaattcg
      541 atgctgtaga gcttcgaggt ggggagcttt tcgtccgcaa gcgctttcaa aatgaacgcc
      601 gaggacatgc caataaatcc gcccgattcg acgagcacca tagggcgcaa ccagcgcgtc
      661 aatccgtaga gcgttgcgca atcgagcgct cccatcacgc cttcgctgcc gtaagcgtct
      721 cggcggctaa tcatgtccga catgaattca ctggcccgaa tttcctttgc gaaccgcgca
      781 acggcgtccc acatcgagta aaaggacgta gagaccggct gcatttggtt ttgagttccg
      841 gttcgtgttc gccagggcca ctgaactgcg cgcatggaaa aatgaaagtc gcaacggtcg
      901 ctcagctttg aaccaaagcg agcaaatttg tggcgcagac aatcttgtct gcgacgccac
      961 cggcagacag gattgtctgc ctcacgccga atcccccttt tttcccagcg aagctgtgct
     1021 taattcctcc gttttcccca tgagtagtaa aacaaagccg cgcgaggcgg agctgaactt
     1081 tgagggcgca atggatcggc tcgagaaaat tgtcgagcag atggaatcgg gtaaattgcc
     1141 actcgaagat ctaatcgtcc gctacgagga agggatgaag ctggtaaaaa tctgccagga
     1201 acgtcttgcc aacgccgagc aaaagatcga gatcattacc cgcaacagta ccgggaaagc
     1261 cgtagtacaa gaattcgagc cctcgcagga agcgggtcct cccgagaaag cagcgatcga
     1321 atccgaaagt accgatgacg aaatcaaact cttctgaaaa tccgcaaact accgagatga
     1381 cagacgcgcc gaagcgtttg ctcgatggaa tccgttcgcc agccgatatc aaagcgcttc
     1441 gtgaacagga tctgccgcaa ctcgcgcagg aagtacgcga tgagctgatc aaggtcctct
     1501 cccaaaccgg cgggcatctc ggaccgaacc tcggagtgac tgagctgacg attgcgttac
     1561 atcgcgtgtt cgataccccg agtgaccgta tcgtcatgga cgtcagccac cagggctatg
     1621 tgcacaaaat gtttaccggg cgcctcgagc gttttcatac gatgcgccaa ttcggcggcc
     1681 tcaatggctt tctgttgcgc accgagagcg aacatgattg ctatggcgcg ggtcatgcag
     1741 gcaccgcgct ttccgcagcg ctcggcatgg ccgtcgggcg cgacttgcgc ggcggtgacg
     1801 agaacatcgt tgtcgtcgca ggcgacgccg cctttacgtg cggaattagt tacgaagcgc
     1861 ttaataacgt caaaacgcac acgaagcggt ttatcgtcgt gctcaacgat aacgagtggt
     1921 cgatcgcaaa aaacgtgggc gcgatcgcta actacctaaa cagcatcgtg gcgaatccca
     1981 cttacgcgca tctgcacgat aaggcgcgcg atttcgtcca ggcgattctt ggaaaaaccg
     2041 gcgtgcagct cgcgcataag gtggaagaaa gcgtcaaggg tttgctcgtg ccgagcgtga
     2101 ttttcgaaga actcggtctc cgctactacg gcccgatcga tgggcacgat atcccgttat
     2161 tgatacggac attcgagttt ctgaagacgc aggaagagcc ggtgctactg cacattctca
     2221 ccaagaaagg aaaagggtac gaaccggcca ttaaacagcc cgacaaattt cacggcctcg
     2281 gcaaatacaa gatcgaaagc ggcgagactg ctccgacggc gacgcccacc tattcggaaa
     2341 tcattggcaa gacactggcg aaattcgcgg acaccaatca gaagctcgtc gccatcacgg
     2401 cggcgatgcc cagcgggacg ggcctttcgc atttcgccaa ggcgcacccc actcggtatt
     2461 tcgacgtcgg cattgcggaa gagcatgctg cgcttttcgc ctgtgggtta gcgacccaag
     2521 gcctgacgcc gtttctcacg atctattcca cgttttttca gcgcgcctac gacatggcga
     2581 ttcacgacat ggcgatccaa aaactaaatg tcaggctctg catggaccgc gctggattaa
     2641 gcggcgacga tggcccgacg catcatggtt tgttcgacat cggttatctg cgccacatcc
     2701 cgaattgggt gcacatgcag ccgaaggacg aagatgaatt cgtcgacatg ctctggacaa
     2761 tggcgcacta taactccggt ccaatcgccg tccgctaccc gcgaggtcca ggaacaggcg
     2821 cgcaaatcaa atcggaacca aaacttctcg agattggcaa agcggaagtc gtgcaacacg
     2881 gccgcgaggt ggcaatcttc gggctgggaa acatgtttga ggttgcggaa gaagctgcgc
     2941 gcaaacttga agagaaagga atttctgttg cgctgatcaa tccgcgttgg atcaagccga
     3001 tggacaccgg cacgctcgaa tttttcgcgc gcagcgtaga cgtggtctgc acgatcgaag
     3061 atcacgtttt gtacaacggt ttcggctgcg cggtgatgga acatctgcac tcgcagatga
     3121 tcaatacccc tgtggtgcgg atcggttggc ccgatcaatt catcgaacac ggcgccgtcc
     3181 caatcctgcg gaagaagcac ggcatcacag ctgacgcgct ggtggaaaaa gtgcttccgc
     3241 tccttcgcaa aaaatccaag ctcacgccat cggtagcctg agaaagcgaa gggcgccttc
     3301 gtttccgaaa gcgcccttca tagtttcgat ggcgataagc cgaattctgt cggcgtgatt
     3361 gctcacgctg atgatcattc atctcacgcg gatttctccg aatgcccagc gaactttcgt
     3421 tcgccgtggt gcgacgatac ccgaggatta aatcgggccg gctgcccttc ctctgttttg
     3481 tcttgcaccg catggggttt ttcgtgcctc gcgaattact ccgcgagcgg tgagctctta
     3541 actcgccttt tcacccttac ctgcgctttt ctcaaagaac cggcggtatg ttttctgtga
     3601 cactttccgt caacgcccgc tctcgcgaac gttgcccgcg tattttacgc ggcaagctgc
     3661 cgtatggtgt tcggactttc ctccagcgag ccgcaaggga cccaccagcg atcatctgcc
     3721 atcggcggat aaattaccat aaaaacagaa atctggaagc cacgaaacca tgaatcagga
     3781 aagcaagaac gcaggaaatg gttttgcgcc gcaggcgctt tggagtgcgg tggcttgaca
     3841 ccgctttaga tcgccgggca acaattcccg tttttctgac tcaaaacggc gagggcacat
     3901 tcaccagaaa aatgataatc atcgccagtg cgatgatgag cttggcgagc atggcgccaa
     3961 tgttcccgag caaacttccc caccccgcgc ggccagcgtc aatcatacgc ttgcccgcga
     4021 tgacttcacc gatgatcgcg ccaatcaccg gaccaacgaa
//
LOCUS       DATDAJ010000331         2487 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1906748, whole genome shotgun sequence.
ACCESSION   DATDAJ010000331 DATDAJ010000000
VERSION     DATDAJ010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906748"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VIS53_08220"
     CDS             complement(<1..848)
                     /locus_tag="VIS53_08220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767805.1"
                     /translation="MCALLVFASCKKNEPIDEAKTAGKSTADFPQIAADVFKPMDGGI
                     DLSPEEIMGRNTWNLWSGGNEHFWNHAAQDSFGLMDLLKMLDNRKFSRGERFKVLGLV
                     NEPGFRAASKPDEFGLWLDEEAEPEPAGIDRTVYGKPSGVLGFRLFPNPDFNEEARKK
                     WNGDRFMNEPSYYNDNKLIRPYRVGVACGSCHIAPNPNNPPLDPENPRWENLASAIGN
                     QYINEGKVFACNVEKGGFFYEMLLAQPRGTSDTSRIATDHINNPTAINAIFLLAERER
                     IQVPEK"
     gene            complement(1148..2032)
                     /locus_tag="VIS53_08225"
     CDS             complement(1148..2032)
                     /locus_tag="VIS53_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HEY5767806.1"
                     /translation="MTNNPTEPFTLGHSPDPDDAFMFYAIAKGKIDLRGYRFEHRLED
                     IQTLNERAQRGELHISAISIHAYAYVADKYALLPCGASMGDGYGPVVVRKHPTPNVQR
                     STPNQEVDARESLRSGTIAVPGKMTSAFLALQLFLGKFNFIVVPFDKIFDAVESGRAD
                     AGLIIHEGQLTYARSGFEKIVDLGEWWKRKTGLPLPLGGNVVRKDIPPPVRHDVSEII
                     GESIDYGLTHRDEAVAYSLAYARDMNAQLASKFIGMYVNEFTRDYGETGRAAIREFLT
                     GARDKGYIEVPIEVEFAE"
BASE COUNT          521 a          678 c          667 g          621 t
ORIGIN      
        1 atcttttccg gtacctggat ccgttcacgt tcagcgagca agaagatcgc attgattgca
       61 gtcggattgt tgatgtgatc tgtcgcgatc cgcgaggtat cggaagtgcc gcgaggctgt
      121 gcgagaagca tttcgtaaaa aaatccgcct ttctctacgt tacaggcgaa cacttttccc
      181 tcgttgatgt actgattgcc gatcgctgac gccaaatttt cccagcgcgg attttctgga
      241 tcaagcggcg gattattcgg attcggcgct atgtggcagg agccgcacgc tacaccgacc
      301 cgatacggac ggatgagttt gttgtcgttg tagtaactgg gctcgttcat gaaacgatcg
      361 ccgttccatt tcttgcgcgc ttcctcgttg aaatccggat taggaaaaag ccgaaaaccg
      421 agcacgcctg aaggtttgcc gtaaactgtt cgatcgatgc ccgccggttc gggctccgcc
      481 tcttcgtcga gccacaagcc gaattcatcc ggcttgctcg ccgctcggaa tcccggctcg
      541 ttcaccagcc cgagcacttt gaaacgttcg ccgcgggaaa atttgcgatt atcgagcatc
      601 ttgagcagat ccatcagacc aaaactgtcc tgcgcggcat gattccaaaa atgctcgttg
      661 ccgccgctcc agaggttcca ggtattgcga cccattattt cctccggcga aagatcaatg
      721 ccgccatcca tcggcttgaa aacgtcagca gcgatttgcg gaaaatccgc cgtgcttttt
      781 cctgccgttt tagcttcgtc gatcggctcg ttttttttgc agctggcaaa gacgagtagc
      841 gcgcacatac cggcgcaaga tccgactcga ctgagacgga gaaaatggcg cctcgctggc
      901 aacattgcgt tcaccgagtc atcattgata cgtcgctggt gaatcgtgtg gcaagaaaat
      961 tttggaaaac agcgaacgac ggctccgatc gggagctgaa tcagatcctg cttgagcttt
     1021 gtgtgcgcct cgcgatgccg agataagaac ccgcttcagc ggtttcccaa atccagcaac
     1081 ccgctgaagc ggtttaagag cggttgtgac gctgaaggca cctcgctgaa gcgaggtgtt
     1141 aatgagttta ttccgcgaat tccacttcga ttggaacttc gatgtagccc ttgtcgcgag
     1201 cgccagtcag aaactcgcgg attgctgcgc gtccagtttc gccataatcg cgggtaaatt
     1261 cattcacgta catgccgatg aatttgctgg ccagctgcgc gttcatgtca cgtgcgtatg
     1321 cgagcgaata agcgacggct tcgtcccgat gtgtgagacc atagtcgatg ctttcgccaa
     1381 tgatctcgct gacgtcatgt cgcactggtg gcgggatatc tttgcgcacc acgtttccgc
     1441 ctaacggcaa cggcagccct gtcttgcgct tccaccattc accgagatcc acgatcttct
     1501 caaagccaga ccgtgcgtat gtgagttgcc cctcgtgaat gatcaaaccg gcatccgcgc
     1561 gtccgctttc taccgcatcg aaaattttgt cgaacggaac gactatgaag ttaaatttgc
     1621 ccagaaaaag ctgaagggcc agaaacgcgc tggtcatctt gccggggact gcaatcgttc
     1681 cgctgcgcaa cgattcccga gcatcaactt cttgattggg tgttgagcgt tggacgttcg
     1741 gcgttggatg ttttctgacc accaccggtc catatccatc gcccatgctc gcgccacacg
     1801 gcagcagcgc gtatttatct gcgacgtagg cgtacgcgtg aatggaaatg gctgaaatgt
     1861 gtagctcacc gcgctgcgcc cgctcattca acgtctgaat gtcttccagc cgatgttcaa
     1921 accgataacc gcgcagatcg attttgccct tcgcgatcgc gtagaacatg aacgcatcgt
     1981 ccgggtcggg tgaatgccca agtgtaaagg gttcagtggg gttgtttgtc atttagcatt
     2041 cgtcattcgc accgtatggg catttggtcg ttatacaaaa ggctgtgtca ctcagtttac
     2101 gcactctcca gcgagctaaa cgaatttagc tgtagccgcc tctgtgtgag aggcgttgct
     2161 gaagagtgcc atggaggcgt tgggatcggc gctccgcaca gcgaagcggc tacagtacaa
     2221 caaaacagcc gccgcgcggg gttcgcgcgg cggctgaatt tgtatcgagg aaacgctgac
     2281 ttctctaaca gcgctccttg acaacagttt tatcgattct ctactacgcg cggcgttggg
     2341 cggaccatct caagctgagc gctcactttt tggatttggg cggcctgctc tctgagctgg
     2401 gctgtgagag tgtctatttg tttctgttgc tgcgtgaccg tcgcttcttg ctgcgcgacc
     2461 gttacttgca acttctcaac tttctcg
//
LOCUS       DATDAJ010000332         2996 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1907289, whole genome shotgun sequence.
ACCESSION   DATDAJ010000332 DATDAJ010000000
VERSION     DATDAJ010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1907289"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1538
                     /locus_tag="VIS53_08230"
     CDS             312..1538
                     /locus_tag="VIS53_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5767807.1"
                     /translation="MAEKLQTRCLIVGGGPAGIMAGYLLARAGVPVIVLEKHADFFRD
                     FRGDTIHPSTLELMYELGLLEEFLKQPHQEVRELRAVIDGQTVPIADFTKLPTRCKFI
                     AFMPQWDFLNFLSAHAKEFPSFQLLMQHEVVDLIFDQQRVTGVRAKTPRGELDVRADL
                     IIGADGRHSIVQACAGLRRQDFGVPIDVLWMQISKKQDDPQQSLGFFQHGKLLVLLDR
                     GDYWQCGFVIPKGGFEDIKARGLQQFQNDVVSFAGFLRDRVAELDDWSKIKLLTVQIN
                     RLRDWCRDGLLCIGDSAHAMSPAGGVGINLAIQDAVATANLLAAKLRSGPVSLDDLRK
                     VQARREWPTRLIQTMQVFIHRRVVTGRTSDPNGSLPFVFRLLKWFPVLRQIPGRFIGI
                     GPRPEHFHSPTTRESH"
     gene            1569..2555
                     /locus_tag="VIS53_08235"
     CDS             1569..2555
                     /locus_tag="VIS53_08235"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY5767808.1"
                     /translation="MVQLQGSVNLDTIRRAHKRIRPHIHRTPVLTNSWLNDACRAALF
                     FKCENFQKVGAFKARGATNAVFALDDETARRGVATHSSGNHGSAVARAAKLRSVPAHI
                     VMPSNSAKVKIRAVESYSAQLVFCEPTEESREIKCTEVINKTGATLIHSFENEHVITG
                     QGTAAMELLEDIPDLDVIMCPVGGGGLLSGPAIAAKSMRPQIKVIAVEPQNADDAAQS
                     FRAGRRLVTEKKFTIADGLRTNIGEPNFAIIHQYVDDIVTVSEEAIISAMRTIWETMK
                     IVIEPSAAVPYAAIAQRIFDVERKRVGIILTGGNVDLDALPWNCSRDRLVTP"
     gene            2698..>2996
                     /locus_tag="VIS53_08240"
     CDS             2698..>2996
                     /locus_tag="VIS53_08240"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEY5767809.1"
                     /translation="MMSYLLFFIATVLAGAINALAGGGGLITFPLLTLVVTPVTADAT
                     SAVALFFAYPAAVWRTRDQLEGVLGRGWLWLLLIPSVFGGLIGAVVLSRTGNRSF"
BASE COUNT          653 a          795 c          867 g          681 t
ORIGIN      
        1 agcagcgacg acggcgtgat gcagttgttg gatgaacgcg tgaacagatt gccaacgcct
       61 ttcgagctgg agtggcacca tgtctcagga aagccgtggg attggaagct cgtgcacgtg
      121 agtaatccga cattccaaat cccagctgac gtgtattaag tcatctcaca catcgtgctg
      181 tcatgttgag cgaagcgaaa catctctggc tatttctgca cggcgtttgc ttcagaagtg
      241 atcagagatt cttcgctccg ctcagaatga cattgtgagt tgagttctca tccgtgctat
      301 ccgtgtcatc catggctgaa aaactgcaaa cgcgttgtct catcgtcggc ggcggaccag
      361 ccgggatcat ggctggctac ctgctcgcgc gagcgggtgt gcccgtgatc gttttggaaa
      421 aacacgccga tttctttcgc gattttcgcg gcgacaccat tcacccgtcc acactcgagt
      481 tgatgtacga gctcggattg ctcgaggagt tcctaaagca gccgcatcag gaagtacgcg
      541 aactacgcgc agtcatcgat ggtcagactg tgccgatcgc cgatttcacg aagctaccca
      601 cacgctgcaa attcatcgcg ttcatgccgc agtgggattt tctcaatttc ctttccgcgc
      661 atgcaaaaga atttccgagt ttccaattgc tgatgcagca cgaagtggtc gatctgatct
      721 tcgatcagca gcgtgtgacc ggcgtacgcg cgaaaactcc acggggtgaa ctggacgttc
      781 gcgctgacct gattattggc gcagacggac ggcattcgat cgttcaagcg tgcgccgggc
      841 tgaggcgaca agatttcggc gtcccgatcg acgtgctctg gatgcagatc tcaaagaagc
      901 aggacgatcc tcagcaatca ctcggcttct ttcagcacgg aaagctgctc gtgttgctcg
      961 accgcggtga ttactggcag tgcggctttg taattcctaa aggcggcttc gaagacatca
     1021 aagcacgcgg tttgcagcaa tttcaaaacg acgtcgtcag ctttgccgga tttctccgcg
     1081 accgcgtcgc agagctcgat gactggtcaa aaatcaaatt gctcacggtg caaatcaatc
     1141 gtctgcgcga ttggtgccgg gatggacttc tttgcatcgg ggattctgcg catgcgatgt
     1201 caccggcagg cggcgtgggc atcaatctcg cgattcagga tgccgtcgcg actgccaatt
     1261 tgctggccgc aaaattgaga agcggtccgg tttccttgga cgatctacgc aaagtgcagg
     1321 cgcgccgcga atggccgacg cggctcattc aaacaatgca ggttttcatt catcgtcgcg
     1381 tggtcactgg tcgtacgtct gatcccaacg gctcgttgcc ttttgtgttt cgcttgctga
     1441 aatggttccc ggtcctgcga cagattccgg gccggttcat tggaatcgga ccgcgtccgg
     1501 agcattttca cagcccgacg actcgagaat cacattgaca ctttcggcgt catcgacgcc
     1561 tttttcggat ggtccaacta cagggatcag tcaaccttga tacgatccgc agagcgcaca
     1621 aacggattcg cccacacatt catcgcacgc ccgtcctgac gaattcgtgg ctgaatgacg
     1681 cgtgcagggc ggcactgttt tttaagtgcg aaaattttca gaaggtcggt gccttcaagg
     1741 cacgaggcgc aaccaatgcc gttttcgcgc ttgacgacga aactgcgcga cgcggcgtgg
     1801 caacgcattc ttccggtaac cacggttccg cggtggcgcg tgcggctaag ttgcggagcg
     1861 ttccggcgca catcgtgatg ccctcaaatt cggcgaaagt gaagatccgc gcagtggaga
     1921 gttacagtgc gcagcttgtc ttttgcgagc ccacagagga gtcgcgtgag atcaaatgca
     1981 cagaggtcat caacaagacc ggcgcaacgt tgattcactc gttcgaaaac gagcacgtaa
     2041 taacggggca ggggacagca gcaatggaac tgctcgaaga cattcccgac cttgatgtga
     2101 tcatgtgccc ggtcggcggc ggcggtctct tgtcgggacc agcaatcgcc gcgaaatcga
     2161 tgcggccgca gataaaagtg atcgcggtcg agcctcagaa tgcggatgat gcggcgcaat
     2221 cgtttcgtgc aggacgacgg cttgtgactg aaaagaagtt caccatcgcc gatggccttc
     2281 gcacaaatat tggcgaacca aactttgcga tcattcacca atatgtcgac gacatcgtga
     2341 cggtaagcga ggaagccatc atttcagcga tgcgcacaat ttgggagacg atgaagatcg
     2401 tcattgagcc atcagcggca gttccgtatg cggcgatcgc ccagcgtata ttcgatgtgg
     2461 agagaaaacg cgtgggaatt attctcacgg gcgggaacgt cgatctggat gctttgccgt
     2521 ggaactgtag ccgggatcgg cttgtcacgc cgtagccgcg gcgaaggcgg atgatcccgg
     2581 ctcgaccaaa aatgtttgcg tagagtggca tcaacgatgc cggccgcatg atagcgatgc
     2641 ccctattcca gagcagacga gcaggagcat gagcacgagc aggagaaaga aaaggggatg
     2701 atgagttacc tcttgttttt cattgccact gttctggcgg gagcaatcaa cgcattggcc
     2761 ggcggcggtg gactgatcac ctttcccttg ctaacgctcg tcgtaacacc agtgactgcc
     2821 gacgctacaa gcgcggtcgc tctattcttt gcttatcccg ctgctgtgtg gcgcacccgg
     2881 gaccagttgg aaggtgttct tggtcgcgga tggttatggc tgcttctgat tccaagtgtg
     2941 ttcggcggtt tgatcggggc tgtggtgcta agccgcacgg gcaaccgcag ctttat
//
LOCUS       DATDAJ010000333         4929 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1909432, whole genome shotgun sequence.
ACCESSION   DATDAJ010000333 DATDAJ010000000
VERSION     DATDAJ010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4929
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1909432"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1310)
                     /locus_tag="VIS53_08245"
     CDS             complement(<1..1310)
                     /locus_tag="VIS53_08245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767810.1"
                     /translation="MRRHWFFIGLFVVVAATRFAVLFASQTHVHSDEAIIGLMGKHIL
                     EGRHFPFYMYGQPYNAGAAWEAYLASVAFAFFGVGVVPLKGCIVVLSLLCLFLFYRMG
                     CALYDRRTAIFATVAFALAPSLLKWHFQVRGYSWYLLSIPVLTLLFASIGSTPGPKRR
                     TLLLFGLASGLSIWCLELTVPVVAALWLLLILRRRISLSSAPVGLIGFLLGYAPVIVF
                     NLTYRFSNWRYVAIERPGGGFSALFQLSNWRRIFLDEMPKFFGPDTVLWYYPEKPAVG
                     YVFYVIALFALGLAIWPFVKSPGKILPAMGGELADARQKSDFDMVVLTAASFIPYVSQ
                     APGVPSYFLGGCFFLSMLTGRMLERGFYSSMPLPRLGAAAGLAAILLTGIFVLIRVGQ
                     TNQIETLSLCEDRRTYCITRIASADIDGVHRDLKQRNVTSVWTT"
     gene            complement(1353..4241)
                     /locus_tag="VIS53_08250"
     CDS             complement(1353..4241)
                     /locus_tag="VIS53_08250"
                     /inference="COORDINATES: protein motif:HMM:NF037959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEY5767811.1"
                     /translation="MGSQSGRVAVFCGVLFLSGTGALIFETLWLRLSGLAFGNSTWAA
                     ALILSSFMAGLALGNALAASSRIRRWRPLHFYIVLELFVAFFGCTIVFGLPVVGDLMR
                     PVWQMLWNYQPTLLGLRFVVSFLILLVPTTAMGLTLPVIIEDPLLRETEFGRAIGFLY
                     GSNTLGAMLGAILGEAYLIGAFGLYGTSLAAATAVCIAAVIALALARFGTARYVTDLK
                     GVGPSARSKFPLSFGASYRPPWRLLFVSFGTGLILLALEVVWFRFLRLYVVSLPTAFA
                     VMLAVVLAGIGLGGIAAGAISRRSTGLNQLITVLLLLAAIAVLLSYLLFPGEAVKTAA
                     GAFLASWPQIALLCLALMFPVSFLSGMIFPTIVARVQVEVTDRMNSTGIATLLNTSGA
                     AIGPLVATFVLLPSLGYQSSLICCAAAYALLSIIVTERALCSLRRPTGIILVTLWIAL
                     ILGLVFFPYRRSEAHFEHASCPYERDDQGHVLARVVKRIEGTSDTWQLLQRDLFGQAY
                     YYRLLSDSFSMSATSPRNQRYMRLFAYLPLALHPGAKEVLLICYGCGVTADAFTRKSS
                     LERIDIVDISKEVFSLADSYTGINYSNPLRDPRVHAIVQDGRFFLQASARKYDIISGE
                     PPPPKVAGAVNLYTQEFFSLMRSRLNEGGIATFWLPINQLKVDEVKAILRAFHNAFPN
                     ASVWGSADQDWIMMGINGPVRKTSEDELRQFWNDPATGGDLRRIGIEVPQQLGALFLM
                     DGEEIDRITHNTAPLNDLHPKRLTDGPWDNEASHRFALSYFTAPAAFQRFVGSSVVNQ
                     IWPETLDPAAAELESFFTIRQTRYLSEIVGSNKLAELDIYLRHSRLRIPVLEVLGSDG
                     FRVSIAERAARGSEPPPIEVMPDLIAGALAQRKIDRAIKLLESEKDRGGFGANEIFLL
                     SYLYCLNGNVEKAETLVADNAASIKKDWFVDWLWEKLQTDFGFHPPTN"
     gene            complement(4288..>4929)
                     /locus_tag="VIS53_08255"
     CDS             complement(4288..>4929)
                     /locus_tag="VIS53_08255"
                     /inference="COORDINATES: protein motif:HMM:NF018648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEY5767812.1"
                     /translation="FVHASGVHATIAGIVLAFTIPTHSRINAREFSRESRSLLDQFDR
                     TETGDLVVLTSKGQQEAVFALERVSEGVTAPILRLEHALHNFSAFVVMPLFAFANAGV
                     KIDLSMQHIEIGLGVLAGLVFGKPIGIILAALIVVKAGIATFPQGVNWRSLFGYACLA
                     GIGFTMSLFIAMLAFADNALVDAAKRGIIVGSLLAGIAGAVILKMCPVSRDDR"
BASE COUNT         1332 a         1406 c         1283 g          908 t
ORIGIN      
        1 atcgtggtcc agactgaggt cacgttgcgt tgcttcaaat cgcgatgaac cccgtcgatg
       61 tccgctgagg caattcgcgt gatgcagtac gttcgcctgt cctcgcacag agagagtgtt
      121 tcaatctgat tggtttgtcc gacgcggata agaacaaaaa ttcccgttag caagatcgcg
      181 gcgagcccag cggccgcgcc gaggcgcggc aatggcatcg aggaataaaa gccacgttcc
      241 aacattcgcc ccgtcaacat cgacaggaaa aaacaccccc cgaggaaata gctgggcaca
      301 cctggagcct gactcacata agggatgaaa gaagctgccg taagcactac catatcaaaa
      361 tcggattttt gccgcgcatc tgctaactca ccgcccatcg cgggcagaat ttttccaggt
      421 gatttcacga aaggccatat cgccaagccg agagcgaata aggcgatcac atagaaaacg
      481 tagccgactg ccggcttctc gggataatac caaagaaccg tgtccggccc gaagaacttc
      541 ggcatttcat ccagaaaaat tcgacgccaa ttggaaagct gaaagagagc cgaaaatcca
      601 cctcccggtc tttcaatggc aacatatcgc cagttgctga accggtaggt gaggttaaac
      661 acaatcaccg gcgcatagcc caacaggaac ccaatcaaac cgactggtgc actactgagc
      721 gaaatcctgc ggcgcaagat caacagcagc cacaacgcgg cgaccaccgg gaccgtcaac
      781 tccaggcacc agatgctcag gccagacgca aggccaaaga gaagtaatgt ccttcgcttg
      841 ggacccgggg tcgatccgat cgatgcaaag agcagcgtta ggacaggaat cgaaagtaaa
      901 taccaggaat aacctctcac ctggaaatgc catttgagaa gagatggcgc tagagcaaag
      961 gcgaccgttg cgaaaatggc cgtgcgccgg tcatatagag cgcaacccat tcgataaaac
     1021 agaaacagac acagcagcga taagactaca atacagcctt ttaacggaac gacgccgacg
     1081 ccgaagaacg cgaacgcaac cgaggctaga taagcttccc atgccgcgcc agcattgtac
     1141 ggctgaccat acatgtagaa agggaagtgg cgcccttcca gaatgtgttt acccatgagg
     1201 ccaatgatgg cttcatcact atggacatgg gtttgcgatg caaacagaac cgcgaaacgc
     1261 gtcgccgcaa cgacgacgaa cagtccgata aaaaaccagt ggcgacgcat caaaattgat
     1321 tgactggcaa ttcgaggata ttgaacggcg aatcaattgg taggcggatg gaatccgaaa
     1381 tcggtttgca gtttttccca cagccaatcg acaaaccaat ccttcttaat tgaagcagcg
     1441 ttgtcggcaa ccaacgtctc tgccttttca acgttgccgt tcaagcaata gagatagctg
     1501 agcaggaata tctcgttagc gccgaacccg ccgcgatctt tctcgctctc caacaactta
     1561 atcgcccggt cgattttccg ctgtgccagc gctcccgcga tcaagtcggg cattacttct
     1621 atcggcggcg gttcggaacc tctggccgcg cgttcggcga tggaaacccg gaacccgtcg
     1681 ctgcccaaca cttccaaaac cggtattctt agacgggaat ggcgaagata aatatcgagc
     1741 tcagcgagct tgttgcttcc aacaatttca gaaagatagc gcgtctgcct gatcgtgaag
     1801 aacgactcga gctcagccgc cgccggatcc aatgtctcgg gccagatttg attaaccacc
     1861 gaagaaccaa caaaacgttg aaacgccgcc ggtgccgtaa aatagcttaa cgcgaaccgg
     1921 tgacttgcct cgttatccca cggaccatcc gttaggcgct tgggatgaag atcgttgagt
     1981 ggcgctgtgt tgtgcgtgat tcgatcgatt tcttcgccgt ccatcaaaaa aagtgcgccc
     2041 aattgctgcg gaacctcaat tccaattcgt cgcaaatctc caccggtggc cggatcgttc
     2101 caaaactgac gtagctcgtc ttcactcgtt ttgcggaccg gcccattgat ccccatcatg
     2161 atccagtcct gatcggcgct gccccagacc gaggcgtttg gaaaagcgtt gtggaaggca
     2221 cgcaggatcg ccttaacttc gtccactttc agttgattga tcgggagcca aaaggtcgcg
     2281 attccgcctt cgttcagtcg acttcgcatg agcgaaaaaa actcctgggt gtaaagattc
     2341 actgcgccgg cgactttcgg cggtggcggt tcgcccgaga tgatgtcgta ttttctcgcg
     2401 ctcgcctgca ggaaaaaccg cccatcttga acgatggcgt gcacgcgcgg atcccgaagc
     2461 gggttggagt aattgattcc ggtataagaa tcagccagag agaacacctc cttggagatg
     2521 tccacgatat cgattctttc gagacttgat ttgcgagtaa acgcatccgc agtcacgccg
     2581 cacccgtaac agatgagcag cacctctttc gctcctggat gcaacgccag cggaagatag
     2641 gcgaataacc gcatgtagcg ctgattgcgc ggacttgtcg ccgacatcga gaacgagtcg
     2701 ctcaacagcc ggtaatagta cgcctggcca aacaaatcgc gctgtagcaa ttgccaggtg
     2761 tccgatgttc cctcgatccg tttcaccacg cgcgccagca catggccctg atcgtccctt
     2821 tcgtatggac agctcgcatg ttcgaaatgc gcttcgctgc gtcgatacgg gaaaaataca
     2881 aggccaagga tcaatgcgat ccaaagcgta acgaggatga tcccagttgg ccggcgcagc
     2941 gagcacagtg cgcgttcggt gacgatgatg ctaagcaaag catacgcggc agcacagcaa
     3001 atgagactgg attggtagcc gagagagggc agcaggacga aagttgcaac caacggcccg
     3061 atcgccgcgc cactcgtatt cagcagagta gcgattccag tgctgttcat ccggtccgtc
     3121 acctcaactt gaacgcgagc gacaatggtc ggaaagatca ttccggataa gaacgatacc
     3181 gggaacatca aagctaaaca cagcaatgcg atctgcggcc atgaagcaag aaaggcgccc
     3241 gcagcggttt ttactgcttc gccgggaaac aacagatacg acaaaagcac cgcaatagca
     3301 gccagcagca acaggacagt aatcaactga ttgagtccag ttgaacggcg ggaaatcgcg
     3361 ccggccgcaa ttccgcccaa gcctataccg gccagcacaa ccgccagcat caccgcgaac
     3421 gcggtaggta atgacacgac atacagacgc aggaatcgga accaaaccac ttccagcgcg
     3481 agaagaatca gacccgtgcc gaagctcacg aaaagcaaac gccacggagg ccgataactc
     3541 gcaccgaagc tgagcggaaa tttggagcgt gccgacgggc cgacgccttt gagatctgtg
     3601 acgtatcgcg ccgttccaaa tctcgcgagt gccaaagcga ttaccgcagc aatgcaaacc
     3661 gctgtggcag ctgccaaact agtgccgtac agcccaaatg cgccgatcaa ataagcttca
     3721 ccgagaatgg cgccaagcat cgcgcccagc gtgtttgacc cgtaaagaaa accaatcgcg
     3781 cggccaaact cggtttctcg cagcagtggg tcctcaatga tcaccggcag cgtcaaaccc
     3841 atcgctgtcg ttggcacaag taaaatcagg aaggaaacca caaaccgcag tcccagcagt
     3901 gtcggctgat aattccacag catttgccac acgggccgca tcaaatcgcc aacgacggga
     3961 aggccaaaaa caatcgtgca accaaagaat gcaacgaaga gctccagcac aatgtagaaa
     4021 tgcagcggcc gccatcgccg gattctcgat gatgcagcca gtgcgttccc caaggcgagg
     4081 cccgccataa aactggatag aatcagcgct gcggcccagg tcgagttgcc aaaggccaag
     4141 ccactgagtc gcaaccacaa tgtttcgaaa ataagggcgc ccgtgccaga gaggaaaaga
     4201 acaccgcaga aaacggcaac gcgcccgctt tgcgatccca ccgcatggga tgcgtgtctt
     4261 gcatggaaca cgtgggattt ttgcgagcta cctgtcatcg cgcgaaaccg gacacatctt
     4321 caggattacc gcgccggcaa ttccggcaag cagggaacca acgataatcc ctcgcttggc
     4381 cgcgtcgacc aaagcgttat cagcgaacgc cagcatggca atgaagagag acatcgtgaa
     4441 cccgattccg gcaaggcacg catagccgaa cagcgatctc cagttaacgc cctgaggaaa
     4501 tgttgctatc cccgccttca cgacaatcaa ggcggccagg ataattccga tcggcttacc
     4561 aaacaccagt cctgccaaca ctcccaatcc aatctctata tgctgcatcg agagatcaat
     4621 tttgacgcct gcattcgcaa aagcgaacaa cggcatcacc acgaatgccg agaaattgtg
     4681 cagcgcatgc tcgagtctga ggatcggtgc agtgacgcct tcgctcaccc gctcgagcgc
     4741 aaacaccgct tcctgttgac ctttgctggt caaaacaaca aggtccccgg tttccgtgcg
     4801 atcgaattga tccagcagcg agcgtgattc tctggagaat tcccgcgcgt tgatgcgcga
     4861 atgtgtcggg atggtgaagg cgaggacaat gcccgcgatc gtggcgtgga cgccggaggc
     4921 atgaacaaa
//
LOCUS       DATDAJ010000334         3017 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1918478, whole genome shotgun sequence.
ACCESSION   DATDAJ010000334 DATDAJ010000000
VERSION     DATDAJ010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3017
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1918478"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1164)
                     /locus_tag="VIS53_08260"
     CDS             complement(<1..1164)
                     /locus_tag="VIS53_08260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767813.1"
                     /translation="MSQIQQLASTDEQKQQPARGLDIYGLVACLVISIFFIAWIILAS
                     KSLNFGSVVFLFALPWVLLRAGAIVTAALRFPSFFALDFLLGVTVVSVAVMSWTFFVP
                     LSVWVLLIVLLVAIASIPKLLPRHRRDPLSALGLLSVIVSLVAATGWSQDLIFPTTPL
                     NGTVVFKPWSDFFIHATFVARSLGSETLSQVGNYEWKGFPVIFYHYASYGVPICLAKV
                     GSLPGYATVVGFWAPFGSFLTGLASYAVGRAFWSQGAGLVALVATSLIPDLALLNIAH
                     PTYGYFWLQHAAPGGLYGVAVGGTALILMAQGVREGRRVWVASGVVVGALIVFFKIQI
                     FAAAFPLLVSFAIVGWPPRKQLQWLLLGGCVAVGVALLPLANRFYIGPNVRFDL"
     gene            complement(1189..2322)
                     /gene="rffA"
                     /locus_tag="VIS53_08265"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(1189..2322)
                     /gene="rffA"
                     /locus_tag="VIS53_08265"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: protein motif:HMM:NF008687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019180 -
                     dTDP-4-amino-4,6-dideoxygalactose transaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009246 - enterobacterial common antigen
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HEY5767814.1"
                     /translation="MIQIPFNRPFATGHELDYVRTAIAAPKFSGDGPFTAECHRLLQG
                     SLGVQKALLTTSCTHALEMAALLLNLGPGEEVIVPAFTFPSALNAFVLRGARPVFVDV
                     RADTLNIDETQIDQRITERTKAIFLVHYAGVGCEMDTVMPIARRHGVAVVEDNAHGLF
                     GKYRGRYLGTFGELATLSFHETKNFSCGEGGALLINNAQFNDRAEILREKGTDRSRFF
                     RGEVDKYTWVDIGSSYLPSDLLAAFLRAQLEHRDQIQARRRQIWETYARDLASWVEAN
                     GVRLAIVPPECEQSYHMFYVIMPSLKSREALISHLAGFGILAVFHYLPLHLSPMGARF
                     GGRQGDFPVTEDLSDRLLRLPFFTGMSSSEQSQVIEAVQAFRC"
     gene            complement(2319..>3017)
                     /locus_tag="VIS53_08270"
     CDS             complement(2319..>3017)
                     /locus_tag="VIS53_08270"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767815.1"
                     /translation="FWFRVRNKLIQWALGNYFPDAKSFFEVGCGTGFVLAGIRETFPG
                     TRLVGSDIFTDGLAFAKARLPGVELYQMDARSIPFEGEFDVVGAFDVLEHLVEDNTAL
                     TQMFNAVRPNGGLLVTVPQQRYLWSASDEHAMHQRRYSRAELRRKVESAGFQIERITS
                     FNSLLFPLMVWSRMRQKRDQNLQRWRELEISPPLNKTLESILKFERLLIQKGVSFPVG
                     GSLLLIGRRALSPS"
BASE COUNT          786 a          848 c          797 g          586 t
ORIGIN      
        1 gagatcgaat cggacgttcg gtccgatgta aaaacgattc gccagcggga gcagagcgac
       61 tccgacagcc acgcaaccgc caagaaggag ccattgcaac tgcttgcgcg gcggccatcc
      121 cacgatggca aaggaaacca gcaggggaaa agccgcggcg aagatctgaa tcttgaaaaa
      181 aacaatcagc gcccctacca ccactcccga tgctacccac acgcggcgtc cttcgcgcac
      241 tccctgggcc ataaggatta acgctgttcc cccaactgct acaccataca aacctccggg
      301 agcggcgtgc tgcagccaga aatagccata agtcggatgg gcgatgttta acaaggcgag
      361 gtcaggtatc agggaagtag ctacgagcgc caccagtccg gcgccttgac tccaaaaggc
      421 tcgacccacg gcgtagctgg ccaatcctgt gagaaacgat ccgaacggtg cccaaaagcc
      481 tacgacggtg gcataacctg gaagagatcc cactttcgcc aagcatatcg ggacaccgta
      541 gctcgcgtag tgatagaaaa ttaccggaaa gcccttccac tcgtaattcc caacttgaga
      601 cagcgtttcg gatcccaaac tacgcgctac aaaagttgcg tggatgaaaa aatccgacca
      661 cggcttgaaa acaacggttc cgttaagagg agttgtggga aaaattagat cttgagacca
      721 gccggttgct gcaacaagag agacaattac gcttagcagt cctaaagcgg aaagcggatc
      781 gcgccggtga cgcggaagaa gcttgggaat actcgcgatc gcgaccagga gcacgatcaa
      841 cagaacccac accgagagtg gcacgaaaaa cgtccagctc atcaccgcaa ctgagacaac
      901 ggtaactccc aaaaggaaat cgagcgcgaa aaaggaggga aaacgcagag cggctgtgac
      961 aattgcaccg gctctaagga gaacccacgg tagcgcgaac agaaaaacta cagaaccaaa
     1021 gttaaggctc ttactcgcaa gtattatcca ggcgataaag aagatggata taacaaggca
     1081 tgctactaat ccgtagatgt ctaagccgcg tgccggttgc tgcttttgct cgtccgtgct
     1141 tgccaactgt tgaatctgac tcatcgggcc tgctcaagca tcgcctgttt agcagcgaaa
     1201 cgcctgcacg gcttcgatta cctgactctg ctccgagctg ctcattccgg tgaaaaacgg
     1261 aaggcgcaat agccgatcgg ataaatcttc ggtgaccgga aaatctccct ggcgtccacc
     1321 aaaacgcgcg cccattggcg acaaatgcag tggcagataa tgaaaaacag cgagaattcc
     1381 gaagcctgcg agatgcgaga tcaatgcctc cctgctctta agcgagggca tgatcacgta
     1441 aaacatgtgg taactctgtt cgcattcggg tgggacaatc gccagccgga cgccgtttgc
     1501 ttcgacccag gaagccagat cacgtgcgta cgtttcccag atttgtcgtc gcctcgcctg
     1561 aatctgatcg cggtgttcga gttgtgcgcg caagaacgcg gccagcaggt ccgagggcag
     1621 atagctcgac ccgatgtcta cccacgtgta cttgtccacc tcacctcgga aaaatcggct
     1681 gcgatcggtt cccttttccc gaagaatttc ggcgcggtcg ttaaactgcg cattattgat
     1741 cagcagcgcg ccgccttctc cgcacgagaa attcttggtc tcgtggaagc ttagagttgc
     1801 cagctccccg aaggtgccga ggtaccggcc gcggtatttt ccaaaaaggc catgtgcgtt
     1861 atcctcgacc actgcgaccc catgccgtcg cgcgatcggc atgacggtgt ccatttcgca
     1921 tccgacgcct gcgtaatgca ccagaaaaat ggctttcgta cgctcggtaa tgcgttggtc
     1981 gatttgagtc tcatcgatgt ttagcgtgtc cgcgcgaaca tctacaaaga caggtctcgc
     2041 gccgcgcaag acaaacgcat ttagcgcaga gggaaaagtg aaggcgggaa caattacttc
     2101 ttctccaggg ccgaggttta gtaggagcgc agccatttcc aaagcgtgcg tgcacgacgt
     2161 cgtgagaagc gccttttgaa cgccaagcga accttgcaga agacggtggc actccgcggt
     2221 gaaggggccg tcaccggaaa acttcggcgc cgcgatcgcg gtccggacgt aatcaagttc
     2281 atggccggtc gcgaatggac gattgaaagg aatttggatc acgacgggct caaagctctt
     2341 cgaccgatca acaaaagcga tcctcctaca gggaaagaaa cgcctttttg tatcagcaac
     2401 cgctcgaatt ttaaaatgct ctccagagtt ttgttaagcg gcgggctgat ttcaagttcg
     2461 cgccagcgtt gcaaattctg atcgcgtttt tgtcgcatac gcgaccaaac cataagcgga
     2521 aacaacaacg aattgaaaga agtgattcgc tcgatttgga acccggcgct ctcgactttc
     2581 cgacgcaatt cagcgcggct gtagcgccgt tgatgcattg cgtgttcgtc gctcgcgctc
     2641 cacaggtaac gctgttgcgg cacagtaacg agcaatccac cgtttggccg gactgcattg
     2701 aacatttgtg tcagcgccgt gttatcctcg acgaggtgtt ccagcacatc gaacgctcca
     2761 acgacatcaa attcgccctc aaacggaatc gatcgggcgt ccatctgata cagctccacg
     2821 cccggtaaac gtgctttggc aaaggcgagt ccatctgtga aaatgtcgct gcccacgagc
     2881 cgcgtccccg gaaacgtttc gcgaatccca gcaagcacga agccggtccc gcagccaacc
     2941 tcgaaaaaac ttttcgcatc tggaaaataa ttgccgagcg cccactgaat gagcttattg
     3001 cgcacgcgaa accagaa
//
LOCUS       DATDAJ010000335         5620 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1922459, whole genome shotgun sequence.
ACCESSION   DATDAJ010000335 DATDAJ010000000
VERSION     DATDAJ010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1922459"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1393)
                     /gene="ligA"
                     /locus_tag="VIS53_08275"
     CDS             complement(<1..1393)
                     /gene="ligA"
                     /locus_tag="VIS53_08275"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEY5767816.1"
                     /translation="MDRTEAKKKIAQLREEIRKHDRLYYQDAAPVISDREYDRLYKEL
                     IDLETQFPDLLTPDSPTQRVGGKPLQAFAQIQHRAPMLSLDNTYSEEEVVNFYKRITR
                     LLPDEKIPVVIEPKVDGVAVSVMYEKGRLKYAATRGDGLVGDDITQNIKTIRSVPHLL
                     SGDAPDIFEVRGEAYLDKAGFEKLNRERKAVGLPLFANPRNAAAGSLKHLDPKAVALR
                     PLGIVFYGTGAVEGADIDLHSKIFRLFKKLGLPTHEDWWLADSIDEVLKTIGNLDEIR
                     RNFPYQTDGAVIKVDTLAQRQQLGFTAKSPRWAIAYKYAAERVETRLQDIIIQVGRTG
                     ILTPVAVLEPVLVSGSTVARATLHNEDEIKRKDIRIGDTVVIEKAGEVIPAVVKVVKS
                     KRPRDTKPFDFAKHIHGKCPVCGGPIRRDPEFVAWRCENLYCPAQTTRRVEFFAARGA
                     LDIESIGGIVADKL"
     gene            1664..3472
                     /gene="murQ"
                     /locus_tag="VIS53_08280"
     CDS             1664..3472
                     /gene="murQ"
                     /locus_tag="VIS53_08280"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEY5767817.1"
                     /translation="MKHCERILGVEGGGTKTAWALVETVVPTGRDDPGWEFRTLEQGK
                     LQPSNFRLTAPERLRAILAELPKQIDCAGVFLAGCGTAEDRDALRQICLEIWPKAKIV
                     TGSDRASGLAAALDHGDGIVVNAGSGSSVTGRRGDRIERAGGWGHILGDAGGGYSLSM
                     QALRLILREYDLHRAEMDFTAKILHALSLNNLDELVRWVQAADKMQIAMLAPVVFEAG
                     AAGDARMMEIIEEGARVLCQYTEAVADRLHLLAPKVVLIGGLFYRDSIYTHAFRRRLK
                     KNLPDARVTTAERAPELGAVWLAAEAQDHATFHPQPSQREIDGLAAALTEQRNPRSQN
                     LEKMTAHELVQLFVEEEKFVQDALRAASAKLARAIEMVTESLRNGGRLFYVGAGSSGR
                     IGVLDASEIPPTFGAPTHLVQGVIAGGVTALHRSVEGAEDEESAGAFALDERTVKPTD
                     VVIGITASGRTPFVRGALARAKSLGAKTILLNCNPHCSHRPMADPDDGSQGCASSEFD
                     LLITLSVGPEILAGSTRLKAGTATKVALNMISTGAMIGLGKVRGNLMIDLRTTSMKLR
                     DRAVRIVAEVTQRDYESARGLLEANDWNLRTALEKP"
     gene            3550..3699
                     /locus_tag="VIS53_08285"
     CDS             3550..3699
                     /locus_tag="VIS53_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEY5767818.1"
                     /translation="MLWTIFVILLVLWLLGLVSSYTLGGFIHILLVIAVVVLIIQLLS
                     GRRAL"
     gene            3710..3931
                     /locus_tag="VIS53_08290"
     CDS             3710..3931
                     /locus_tag="VIS53_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3185 domain-containing protein"
                     /protein_id="HEY5767819.1"
                     /translation="MKPAGIIGIILIVIGIVALVWGGITYTKREKVLDLGPIQATAEK
                     QKTIPFPPVLGGICLVGGIVLVIVGSRKS"
     gene            complement(4031..>5620)
                     /locus_tag="VIS53_08295"
     CDS             complement(4031..>5620)
                     /locus_tag="VIS53_08295"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY5767820.1"
                     /translation="GGNCESVIEWVRRRNVLLVGTAIGRSGLNVACWLLSKFQPMRLS
                     IFALCLALSTSFGAQPEVVSNDAGPLNPSAAEAGKDVVHQLNNAFAKVFETVAPGVVI
                     IETSKKSEISESSPLDDLFFQGTPDENRPRRNPGTPRPVQSEGSGFIVRPDGYILTNV
                     HVIEDADKIEVKLRDGREFPARVVGADERTDIAVIKVEGKDLPVVQLGDSEAVRVGQF
                     AFAIGAPFKLDYTFTYGVISGKGRSKLLQSGGYSISDYLQTDASINPGNSGGPLCDID
                     GKVIGMNTLINGMNRGLGFAIPINMARDIGAELIAGRKIVRPWLGIRIETLGDDPSIR
                     DLFKGADKGVVVRTIEADAPASKSNLRPFDVITHVDGSAITSDSQLQQEILKKKVGQS
                     IELTVWRKGQAIKVPVKTGELPDEVTRASNQPVQPSEPKPQDLGKFGLQVQEVTKDVA
                     ERLHLSSQQGVIVTDVEENSIASSQGIEREDVITEVDGKPVTNVQSFRDALNKADPKR
                     GVLLYLDRKGSKTFAVLKAGG"
BASE COUNT         1165 a         1579 c         1604 g         1272 t
ORIGIN      
        1 caagcttgtc cgcgacaatt ccaccgatgc tttcgatatc gagcgcgccg cgcgcggcga
       61 agaattccac gcgccgcgtc gtctgtgccg ggcaatacag attttcgcag cgccacgcga
      121 caaattcagg gtcgcgccga atgggaccgc cgcatacagg acattttccg tggatgtgtt
      181 ttgcgaaatc gaacggcttc gtgtctcgtg gccgcttcga tttcacaact ttaaccacgg
      241 cgggaatgac ttcgcccgcc ttttcgatca cgactgtgtc gccgatgcga atgtctttgc
      301 gtttgatttc gtcctcgttg tgcaaggtgg cgcgggcgac ggtgctgccg ctcaccaata
      361 caggctccag cactgctacc ggcgtgagga ttccggtgcg tccgacctga atgatgatgt
      421 cttgcaagcg ggtctcgaca cgttcggccg cgtatttgta agcgatcgcc caccgcggtg
      481 atttcgcggt gaacccaagc tgctgccgct gcgcgagcgt gtccactttg attactgccc
      541 cgtcggtttg atagggaaaa ttgcgtcgga tctcatcgag attgccgatt gtttttagaa
      601 cctcatcaat cgaatcggct agccaccaat cttcatgggt tggcagaccg agtttcttga
      661 acagtcgaaa aatctttgag tgaagatcga tgtccgcgcc ttcaactgcg ccggtaccgt
      721 aaaaaacgat tccgagtggg cgtagcgcga ccgctttcgg atcaagatgc tttaaagaac
      781 cagcagcagc attgcgcgga ttcgcaaaga gcggaagacc cacggctttc cgctcccggt
      841 tcaatttctc gaatccggcc ttgtcgagat aagcttcgcc acgaacttcg aaaatgtcag
      901 gcgcatcgcc gctcaacaga tgcggcactg agcgaattgt tttgatgttt tgagtgatgt
      961 cgtcgccgac aagaccgtcg ccgcgtgtcg cggcatactt caaccggcct ttttcgtaca
     1021 tcaccgaaac cgcaacgccg tccactttgg gctcaatgac cacggggatt ttttcgtccg
     1081 gcaacaagcg cgtgattcgt ttgtagaaat tgaccacctc ttcttcggaa taggtgttgt
     1141 cgaggctaag catcggcgcg cggtgctgga tttgcgcaaa cgcctggagc ggttttccac
     1201 cgacgcgttg agttggcgag tcaggcgtga ggagatcagg aaactgagtt tcgagatcaa
     1261 taagctcctt gtagagccgg tcgtactcgc ggtcgctgat gacaggcgct gcgtcctggt
     1321 aatacagccg gtcgtgcttg cggatttcct cccgcaattg cgcgatcttt tttttggctt
     1381 cggttcgatc catcgagtgt gagcacgata cgagagtgcg aaagctcggc aatgttcgtg
     1441 cgtcgtcatt ccgagcgaag tcgagaatgg aacggctggg aagccgtgac ataaacggga
     1501 aggccggagg ctgagcgaac gggaagtgag cgaatcaaat ctcgtggcaa aacggtaggt
     1561 atttcgcgtg gtccttcgac tccgcttcgc tccgctcagg atgacagcgc taaagatcaa
     1621 cgagctttca aattgccttg ggagcagcta agggtaacca atcgtgaaac actgtgaacg
     1681 catcctcggt gtggaaggcg gcggcacgaa aaccgcctgg gcgttggtcg aaactgtagt
     1741 cccgacaggt cgggatgatc ccggttggga atttcgcact ctggagcaag gtaaactgca
     1801 gccttcgaat tttcgcctca ctgcacccga gcgtttgcgc gcgatccttg ccgaactgcc
     1861 aaagcaaatc gattgcgctg gagtttttct tgccggttgc ggaacagccg aagaccgtga
     1921 cgcgctgaga caaatctgcc tcgagatctg gccgaaagcg aaaatcgtga cgggcagcga
     1981 ccgcgcttcc ggcctcgcgg cggcgctcga tcacggtgat ggcatcgtcg tcaacgccgg
     2041 aagtggatca tcggtaaccg gccgccgcgg cgaccggatc gagcgagccg gcggatgggg
     2101 ccacattttg ggggacgccg gcggcggtta ttctctttcc atgcaggcgc tccgcctgat
     2161 tttgcgcgaa tacgatttgc atcgcgccga aatggatttc accgcgaaga tcctgcatgc
     2221 gctttcgttg aataaccttg atgaactcgt tcgctgggtc caagcggcag acaaaatgca
     2281 gatcgccatg ctcgctccgg tcgtgtttga agctggcgcc gccggcgatg cgcgaatgat
     2341 ggagatcata gaagaaggcg cgcgcgttct gtgccaatac accgaggcgg tcgctgaccg
     2401 gcttcatctg ctcgcgccaa aggtcgttct catcggtggc cttttttatc gcgactcgat
     2461 ctacacgcac gcgtttcgcc ggcggctgaa gaagaatctt cccgatgctc gcgtaacaac
     2521 ggccgaacgc gcgcctgagc ttggtgctgt gtggctcgca gccgaagcgc aggatcacgc
     2581 gacgtttcac ccgcagccat cgcaacgcga gatcgatggt ttggctgccg cattaacgga
     2641 gcagcgcaat ccacgctcac aaaatctgga aaaaatgacc gcgcacgagc ttgtccaatt
     2701 gtttgtggag gaggagaagt ttgtccagga cgctttacgc gctgcctccg cgaagcttgc
     2761 ccgcgcaatt gaaatggtga cggaatcact ccgaaacggt ggccgtttat tttacgtcgg
     2821 cgcagggagc agcgggcgca tcggcgtttt ggacgccagc gaaatcccgc ccaccttcgg
     2881 ggcgccgacg catcttgtgc agggagtaat cgcgggcgga gtcacggcat tgcatcggag
     2941 cgtcgaaggc gcagaagatg aagagagcgc cggcgccttc gctttggatg agcgaactgt
     3001 gaagcccact gatgtcgtga ttggaatcac agccagcggc cggacaccct ttgtgcgcgg
     3061 cgcgctcgcc cgggcaaaat cgttaggcgc gaaaacaatt ttgcttaact gcaatcccca
     3121 ttgtagccac cggcctatgg ccgatcccga tgacggctca cagggctgtg cctccagcga
     3181 gttcgatctg ctaatcacgc ttagtgtcgg accggaaatt ctggctggct ccacaagatt
     3241 gaaagccggc actgcgacaa aggtggcgct caacatgatc agcacgggcg cgatgatcgg
     3301 acttgggaaa gtgcgcggca atctcatgat cgatctgcgc accacgagca tgaaattgcg
     3361 cgaccgcgcc gtgcggatcg tggccgaagt gacccaacgc gattacgaat ctgcccgcgg
     3421 cttgctcgag gccaacgact ggaacttgcg gacggcgctg gagaaacctt aaaaatttct
     3481 gtttcgcata agcgcaacgg aagtggctcg tgcgaagata ggtatgttta accgaaagga
     3541 acaaatccta tgctctggac aatattcgtt attctgctgg tgctatggct gcttggattg
     3601 gtcagctcgt atacgctggg cgggttcatt cacattctgc tcgtgattgc agttgtggtg
     3661 ctgattatcc aactgctttc aggacgtcgc gcattataac gtcgaagcga tgaagccggc
     3721 cggaattatc ggcatcattc ttatcgttat cggcatcgtc gcgttggtgt ggggcgggat
     3781 cacgtacacc aagcgcgaaa aggtgttgga tctcggccca attcaggcga cagctgaaaa
     3841 gcaaaagacc attccgtttc ccccagtact gggtgggatt tgtttggtcg gcggaatcgt
     3901 gctggtgatc gtcggcagcc ggaaaagctg acggcattgc aaagttgtag caaccggcct
     3961 gtgaccggtt cttgcgcggt tttcacgcga agctaccaag acggcccgca gggccgtatc
     4021 tacacgcgaa ctagcctcca gctttcaaga ccgcgaaagt tttgctgcct ttgcggtcca
     4081 gataaagaag cacgccgcgc ttcggatccg ccttgttgag cgcatcgcgg aatgattgca
     4141 cgttcgtcac cggcttcccg tctacctcgg taatcacgtc ttcgcgttcg atgccctgag
     4201 aagaggcgat gctgttttct tccacgtcgg ttacgattac cccctgttgc gatgatagat
     4261 ggaggcgctc cgcgacatct ttagtcactt cctgcacctg caatccaaat ttgccgaggt
     4321 cctgcggttt gggttcgctt ggttggaccg gttgattcga cgcccgggtg acctcgtctg
     4381 gcaattcacc agttttcact ggcactttta tcgcctggcc cttgcgccat accgtgagct
     4441 cgatgctctg accgactttc tttttcaaga tttcctgctg caactgcgaa tcggacgtga
     4501 tcgcactccc atcgacatgc gtgatcacgt cgaatgggcg caggttgctc ttcgaggcgg
     4561 gagcgtccgc ttcgatggtg cgaaccacca cgcctttgtc cgcgccctta aacaaatcgc
     4621 ggattgacgg atcatccccg agcgtttcga tccgaatgcc cagccatggt cgcacgattt
     4681 tgcggccggc gatgagttcc gcaccgatgt ccctggccat gttgatggga atcgcaaatc
     4741 ctaggccgcg attcattcca ttgatcagcg tgttcatgcc gatcactttc ccgtcgatat
     4801 cgcacagcgg tccgccgcta ttccccggat taatcgacgc atcggtctgc aaataatctg
     4861 agatggagta gccgcctgac tgcagcaatt tgctgcggcc tttgccgctg atcacgccat
     4921 aagtaaaagt gtaatcgagc ttgaacggcg cgccgatcgc gaacgcaaat tgccccacgc
     4981 gcactgcctc gctgtcgccg agctgaacga caggcaaatc ttttccctca actttgatga
     5041 ccgcaatatc cgtcctctcg tcggcgccca ccacccgcgc gggaaactcg cggccatctc
     5101 gtaatttcac ttcgattttg tccgcatcct cgatcacgtg cacgttcgtg aggatgtagc
     5161 catcgggccg cacaatgaag ccggagcctt cactttgaac cggtcgcggc gtgccgggat
     5221 tccggcgcgg ccggttttca tccggcgtcc cttgaaaaaa cagatcgtcg agtggcgagc
     5281 tctcgctgat ctcacttttc ttggacgtct caatgatgac aacgcccggc gcgacggttt
     5341 cgaacacttt tgcaaaagcg ttgtttaatt gatgaacgac gtccttgcct gcttcagccg
     5401 cggatggatt gagtggaccg gcatcattag acacgacctc cggttgcgcc ccaaacgatg
     5461 tactgagcgc aagacatagt gcgaaaatgg acaaacgcat aggttggaat tttgacagta
     5521 gccaacatgc aacgttcaac ccgctgcgtc caatagcggt tcccactagc aaaacgttcc
     5581 tgcggcggac ccactcaatg acggactcgc agttcccccc
//
LOCUS       DATDAJ010000336         8300 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1923687, whole genome shotgun sequence.
ACCESSION   DATDAJ010000336 DATDAJ010000000
VERSION     DATDAJ010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8300
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1923687"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            244..1173
                     /locus_tag="VIS53_08300"
     CDS             244..1173
                     /locus_tag="VIS53_08300"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016208 - AMP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5767821.1"
                     /translation="MKKNNGQPIVCGTDFSATAAEAVDIAAAMARRLETKLVLVHVDD
                     QLLGALVSNPVLLETATLQRRVDLDDEAQRLRDLGTNVEEKFLSGSAFDELVTAASGA
                     KGRLIVVGAIGHGLARRLFIGSVAERTAESSPIPTLVVRPGGRLASWIRGEHGLKILV
                     GYDFSAASDAALDWVNQLREIGKFQATVLYSNWPPDEARRLGFEGPLPLVTNSADVQK
                     KLERDLKKRVATFLRSKEVNVLVEPGWGNPEGYLFEMASRQKVDLIVVGTHQRHGLGR
                     VLLGSVSRAVLHHAKVAVAIIAPAETAGRKQRK"
     gene            1170..1715
                     /locus_tag="VIS53_08305"
     CDS             1170..1715
                     /locus_tag="VIS53_08305"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY5767822.1"
                     /translation="MRTKSSSQSRRTRVKPRRILVPVDFSDSSARALRHAAKRAAESD
                     SSLTVVHVVPADYGWLEIGREELRDLDRSLQRQAADRLRTFADENVSDELAQELEVRV
                     GQPAEEILAAARESKCDSIVLSTRGLTGLDRYLIGSVADRVARLAPCPVVLLRPGKRA
                     PSREQKPPAVLRIKRPSKPSS"
     gene            1739..4462
                     /locus_tag="VIS53_08310"
     CDS             1739..4462
                     /locus_tag="VIS53_08310"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY5767823.1"
                     /translation="MQTVARSSWHELPVSKVAELLETDLVSGLSAAEVESRLKRYGRN
                     KVTEKPGTPAWKRFLLQYHQSLIYILLVASGVTLALGEFVDGSVILGVVFILGVIGYI
                     QETKAEDAIRALTKMLVAEATVRRDRRKQRVPSTELVPGDVVLLQSGDRVSADLRLVR
                     LRSLEIDESMLTGESLPVRKHVDPLVLETVLADRKNLAFAGTLVTRGEAEGVVCATGD
                     QTETGRIARLISEAVDLSTPLTRRVAQFSRILLWLILGFAAFAFAVGVWRGEKIVEMF
                     VAAVALAVGAIPEGLPAAVTIVLAIGVGRMARRRAIIRKLPAVETLGSTTVICSDKTG
                     TLTENQMTVQQIFAGGQFYEVTGTGYDAIGVVQADGKPVVPEAHPALLACLRAGLLCN
                     DAVLIRDDGKIRVEGDPTEAALIVAAEKVGLAHADVRRELDRLDAIPFESEHQFMATL
                     HRGKEGHIINKKGAVERVVGRCSTMGDNHGNELPIEPNKIFAAADRMATNGLRVLAFA
                     QRKATTGQRELDHHHVARDLTFLGLQGMMDPPRPEAIAAVRRCQNAGIAVKMITGDHL
                     LTARTIAQQIGLRGISNHETPNAIGGGELERTSDEDLPAIADKSAVFARVTPEQKQRL
                     VKALQSRGKIVAMTGDGVNDAPALKQADIGIAMGIAGTDVAKNAADMILTDDNFASIE
                     AAVEEGRAIFDNLKKFIVWTLPTNVGESFVLLAAILLGTALPMLPVQLLWINMTAVTL
                     LGTMLVFEPKEADLMDRSPRDPNQPILTFPLFMRTGFVSLLMFAGGFALFLWELQREG
                     ASLAEARTAVVNAIVMVEAFYLLNCRSLTRSIFALGIFSNVWVLLGIGLIIVVQLLFT
                     YAPVMNGLFHSSPISGEAWLRIIVVAVTVFAAVELEKWIRFGRCKVSVQND"
     gene            4417..7254
                     /locus_tag="VIS53_08315"
     CDS             4417..7254
                     /locus_tag="VIS53_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEY5767824.1"
                     /translation="MDSLRQVQGFSPKRLMKAKAQTKTSAEAVVAGPRPILSAMFAPK
                     SIALIGASKKPGSVGRALLENLESFRGRVFLINPSHSTLLGQKTFSTIRDVPENVDLA
                     VIATPAATVPGIIAECAAAGVKGAVIISAGFKECGPAGAELEKQVLERRGKMRIVGPN
                     CVGVMLPHIGLNATFAKPLALPGNIGFISQSGALCSAILDWSRSIQLGFSAFISIGSM
                     ADVNWGDLIDYLGDDPHTRSILLYMESVGDARSFLSAAREVALTKPIIVIKVGRTGAA
                     AKAAASHTGALTGSDDVLDAAFRRVGVLRVDTIEELFGLAELLGKQPRPAGPHLAIVT
                     NGGGPGVLATDALIECGGKLAELSGKTFGELNKLLPPHWSRGNPVDILGDASPETYAR
                     AVEIVARDEKNDGLLVILSPQAVTEPTQTAEGLRPFAKLKGKPVLASWLGGVGVRPGG
                     EILDRAGIPTFAYPDAAARAFCAMWRYSHNLDALYETPALSATAEIDRSNAEQIINRA
                     RKAQRTLLTEIESKQLLTAYGIPTVETKIAKSEEEAVELAKKIGGAVVLKIFSETITH
                     KSDVGGVKLNLRGAAAVRRAYREIRDSAAHLSEGRAGSPLPAVSLDAKDGAHGVTRPA
                     TAYFLGVTVQPMIAHDGYELILGSSIDSQFGPVLLFGTGGYFVEVFKDRALGLPPLNR
                     TLARRLMERTQIYNALKRGFRGREPIDLPALEDLLVRFSQLVIEQRWIKEIDINPLLI
                     SPKQMVALDARVVLHDSQTREAELPRSPIRPYPTDYVTTRKIGGVEVTIRPIRPEDEP
                     LMIKFHKTLSDRSVHLRYFGLVSLERRIMHERLRRVCFIDYDREIALVADLKNRDGTH
                     QILGVGRLIKEHGINEAEFAVLISDPWQGKGFGSEILKLLVQVGRKECLRRITGHIAP
                     ENTTMKTVSEQVGFKLCFNPEADEWLAEIAL"
     gene            complement(7315..8247)
                     /locus_tag="VIS53_08320"
     CDS             complement(7315..8247)
                     /locus_tag="VIS53_08320"
                     /inference="COORDINATES: protein motif:HMM:NF023327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3419 family protein"
                     /protein_id="HEY5767825.1"
                     /translation="MGFCEFSGLDVSSTAPITAWQNGCFRAARAGRRSLLFGCMHEDA
                     AIELRVFQPGGRIFCIASAGCTAMKLAAHHTVVAVDINPVQIAYVQKRLGGGAVQRGS
                     AERILAFARTLGPLAGWHTRRVRTFLDLDDQAQQILFWRRHLDTRRFRAAFSFLFSHL
                     FLRSVYSAAFLDGLPPNFGTVLRARMERCFSLHPNRRNPYAYALLAGDTRFGSDTPAL
                     RQIEVRCADAADFLEHQLAGSFTGFSLSNILDGANPAYAQRLFVAVKRAAAPGAMVVL
                     RSFHEPPCATETNHAAEDRAMLWGVVDVRQASAW"
BASE COUNT         1874 a         2227 c         2447 g         1752 t
ORIGIN      
        1 agctgaggct ctgaaggaaa gttgggagga cgtcgcagaa ggcaagatgc ccacttggta
       61 ctacgtggca cttcaccctg aagcacgatt gtccgccaac gatcaatcag tgctgcgaac
      121 gtggtcgctt ccgtcggacg tgatgagaaa cccgagggac gacgatgatt aaagtcgcaa
      181 taaaccgagg atgttttctt gcaacgcgag cgattcgtga aatggaaaag gaacggtaaa
      241 tttgtgaaaa agaacaacgg acaaccaatt gtttgcggaa cagatttttc cgcaacggcg
      301 gcggaagcgg tggacatcgc cgctgcgatg gcgagacggc ttgagacaaa acttgttctg
      361 gtccatgtgg acgaccaatt gcttggggct ctcgtgtcta atcccgtctt gctggagacg
      421 gcgactttgc aaagacgggt tgatctagat gacgaagcgc agcggttgcg ggacttgggc
      481 actaacgtcg aagaaaaatt tctttccggt tctgcctttg atgaattggt aactgccgca
      541 agcggggcca aaggccgact catcgtcgtt ggcgcaatag gacacggtct ggcgaggcga
      601 ctgtttatag gaagcgtagc ggaaagaacg gcagagagtt cgccgattcc aacgttagtt
      661 gtacgcccgg gcgggaggct cgcttcatgg attcgaggcg agcatggatt aaagattctt
      721 gtcggttacg atttttccgc agccagcgat gccgctctgg attgggtgaa tcagcttcgc
      781 gagatcggga aattccaagc cacggtcctt tacagcaatt ggcctcccga tgaggcgcgc
      841 cgattgggat ttgaaggacc gctgccactg gtaactaatt cggctgacgt tcaaaagaag
      901 cttgagcgcg atctaaaaaa acgcgtcgca acgtttctac ggagcaaaga agttaacgtc
      961 ctcgtggaac ccggctgggg aaatccggaa ggatacttgt ttgaaatggc cagccgacaa
     1021 aaagtcgacc tgatcgtcgt cggaactcac cagcgacacg gactgggccg ggtcctgtta
     1081 ggatctgttt cccgcgctgt tttgcatcat gcaaaggtgg cagttgccat aattgctccc
     1141 gctgaaaccg ctgggcgaaa acaaagaaaa tgagaacaaa atcatcgagc caaagccgtc
     1201 gtactcgcgt caaaccgcgc cgcatattgg tgcccgtgga tttttctgat tcgtcggcac
     1261 gcgcattgcg ccatgctgct aaacgagccg cagaatccga cagctcgttg accgttgtcc
     1321 acgtcgttcc ggctgattat ggatggttgg aaatcggacg tgaggaattg cgggacttgg
     1381 atcgttcatt gcaacggcaa gcagccgatc gattgcgcac tttcgccgac gagaacgtga
     1441 gtgacgagct ggctcaggag ctggaagtgc gtgtcggtca gccagcggag gaaattcttg
     1501 cggcggcacg agaatcaaaa tgcgattcga tcgtgctttc gacgcgtggc ctcaccggtt
     1561 tggatcggta cctgattggc agcgtcgccg atcgcgtcgc acggcttgca ccctgccccg
     1621 tcgttctcct gcgtccggga aaacgtgcgc ccagtcgaga acaaaaacct ccagctgtat
     1681 tgcgcatcaa acgtccgagc aaaccctcca gctaacaagt ggtcggcggc cggagagtat
     1741 gcagaccgta gctcgcagtt cctggcacga gcttccagtc agcaaggttg ccgagttgtt
     1801 ggagacggat ttggtcagcg gtctctccgc agccgaagtc gaatccagat taaagcgata
     1861 cggtcgcaac aaagtcaccg agaagcctgg aacaccggcg tggaagcgat ttcttctgca
     1921 gtaccatcag tcactgatct atattttgct cgtcgccagc ggtgtcacac ttgctctggg
     1981 tgagtttgta gatggttccg taattcttgg cgtggttttt atcctcggag tcatcgggta
     2041 catccaggaa accaaagctg aagatgcgat ccgcgcgcta acgaaaatgc ttgtcgcgga
     2101 agcaacagtg cgccgcgacc gacgcaaaca acgagttcca tccactgaac tagttccggg
     2161 cgatgtggtg ttacttcaat cgggcgatcg cgtgtcggct gatctacgcc tcgttcgcct
     2221 gcgaagtctc gagatcgacg aatcgatgtt gaccggcgag tcgctgccag tgcgaaaaca
     2281 tgtcgatccg ctggttctgg agactgtatt ggccgaccgc aagaatctcg cgttcgccgg
     2341 gacactggta acccggggag aagccgaagg agtcgtttgc gcgaccggcg accaaactga
     2401 aaccggcagg attgcgcggc tgatttcgga agctgtcgat ttatccacac cgcttacgcg
     2461 ccgggttgca caatttagcc ggatcttgct gtggttaatt ttggggtttg ctgcgttcgc
     2521 gttcgctgtc ggcgtgtggc gtggcgaaaa gatcgttgag atgttcgtgg ctgccgtggc
     2581 attggcagtc ggagcgattc cggagggatt gcctgccgcc gtaactattg tacttgccat
     2641 cggtgtggga cgtatggctc ggcgccgcgc gatcattcgc aaattgccag ctgtggagac
     2701 actcggcagc acgaccgtta tttgttcgga caaaactgga acgctcactg aaaatcagat
     2761 gacggtgcag caaatttttg ccggcggtca attctatgaa gtcactggaa ccggttacga
     2821 tgcaatcggg gtagttcaag cagatggcaa gcctgttgtg ccggaagcgc atccagcgtt
     2881 gctagcgtgt cttcgtgccg ggctgctctg caacgacgcc gtgctcatcc gcgacgatgg
     2941 caaaattcgc gtggaaggcg atccgacaga agcggcgttg attgttgcgg ctgagaaggt
     3001 aggactcgcg catgccgatg tccgtcgcga gctcgaccgg ctcgacgcga ttccattcga
     3061 atccgagcat caattcatgg caactctcca tcggggaaag gagggccaca tcattaacaa
     3121 aaaaggcgcg gttgaacgcg tggtgggacg ctgttcaaca atgggcgaca accatggcaa
     3181 cgagttaccg attgagccga acaaaatctt cgccgccgcg gaccggatgg cgacgaatgg
     3241 tcttcgggtc ctggcgttcg cccaacgaaa agccacaact ggacagcgcg agctcgacca
     3301 tcaccatgtg gcgcgcgacc tgacgtttct tggtctgcaa ggaatgatgg atccgccgcg
     3361 gccggaagcg atcgctgccg tgcggcgctg ccaaaatgcg ggcattgcgg tgaagatgat
     3421 taccggtgac cacttgctaa cggcacgaac gatcgcgcag caaatcggat tgcgtggcat
     3481 atccaaccac gagacgccga atgcaatcgg tggtggcgaa ctggaaagaa ccagcgatga
     3541 agacttgcct gcgatcgcgg acaagtcggc agtttttgcc cgagtgaccc ccgagcaaaa
     3601 acagcgtctg gtcaaagcgc ttcagagtcg cgggaaaatc gtggcgatga ctggcgacgg
     3661 cgtaaacgac gccccggcgt tgaagcaagc cgacatcggg atcgccatgg gaatcgcggg
     3721 cacggacgtg gctaagaacg ccgccgacat gatcctgacc gacgacaact tcgcttcgat
     3781 tgaggcggct gtagaagaag gccgcgccat ctttgacaac ctcaagaaat tcattgtctg
     3841 gacgctcccc acaaatgtcg gtgaatcgtt tgtgttgctc gccgccattc ttttggggac
     3901 cgccctgcca atgctgccgg tacagttgct ttggatcaat atgacagccg tcactttact
     3961 cggcaccatg ctcgtgttcg aaccgaagga ggctgatctg atggaccgtt cgccccgcga
     4021 tccgaatcag ccaatcctca cgtttcctct gttcatgcgc actggattcg tgtcgctctt
     4081 aatgtttgcc ggcggcttcg ctttgttcct ttgggaattg caacgtgaag gcgcatcgtt
     4141 agctgaagcc cgcaccgctg tcgttaacgc gattgtcatg gtcgaggcct tctacttgct
     4201 gaactgccgc tcacttaccc ggtcgatttt tgcattgggt atcttttcga atgtttgggt
     4261 gcttctcggc atcggcttaa tcatcgtggt tcaacttctc ttcacctacg cacctgttat
     4321 gaacggacta ttccattctt cgccgatcag tggcgaggca tggctgcgca tcattgtggt
     4381 cgctgtgact gttttcgccg ccgttgagct ggaaaaatgg attcgcttcg gcaggtgcaa
     4441 ggtttcagtc caaaacgatt gatgaaagcc aaggcgcaaa ctaagacctc tgccgaggcg
     4501 gtggtagcgg ggcctcgccc gattctcagc gcgatgtttg cgccgaagtc gattgcgctg
     4561 attggcgcga gcaagaaacc gggcagcgtg gggcgcgcat tattggaaaa cttggaatcg
     4621 tttcgtggtc gcgtctttct cataaatcca agtcactcga cgcttctcgg gcagaaaaca
     4681 ttttcaacaa ttcgggatgt gccagagaac gtcgatctcg ctgtgatcgc cacgcctgct
     4741 gcgacagttc cgggaatcat cgctgaatgt gcggctgccg gagtcaaagg tgcggtgata
     4801 atctcggctg ggttcaagga gtgtggaccg gccggggcgg agcttgaaaa gcaggttctc
     4861 gaacgacgcg gaaagatgcg aatcgtcggg ccgaactgcg tcggtgtgat gctgccgcac
     4921 atcgggttga acgcgacgtt cgcaaagccg cttgcactgc ccggcaacat tggattcatc
     4981 agccaaagcg gcgcgctctg cagtgcgatt ctcgattgga gccgatcaat ccaactcggg
     5041 ttcagcgcgt tcatttcgat tggctctatg gccgacgtga attggggcga tttgatcgat
     5101 tatctcggcg acgacccgca cacgcgcagc attttgcttt acatggaatc ggtgggcgac
     5161 gcgcgttcgt ttctttccgc tgcacgcgaa gtcgcgctta cgaaaccgat cattgtaatt
     5221 aaggtgggcc gaaccggagc tgccgcaaag gctgctgcct cgcataccgg tgcgctcacc
     5281 ggcagcgacg acgtgctcga tgcggcattt cggcgcgtcg gcgttttgcg cgtagacaca
     5341 atcgaagagt tgtttggtct cgctgagttg ctcggcaaac aaccgcgccc ggcaggaccg
     5401 catctggcga ttgtgacgaa cggcggcggc cccggtgtgt tggcaaccga cgcgttgatc
     5461 gaatgcggtg ggaagctggc ggaattgtcc ggcaaaacct tcggtgaatt aaacaagctt
     5521 ttgccgccac actggagccg aggcaatccg gttgatattc ttggcgacgc cagtccggaa
     5581 acgtacgcaa gagcagtcga gatcgttgcg agggatgaga aaaatgacgg tttactcgtc
     5641 attctttcgc cgcaagcggt gaccgaaccg acgcaaaccg ccgagggatt acgcccattt
     5701 gcaaagctga aaggcaaacc agttctggcg agttggctcg gcggtgtcgg tgtgcgtcca
     5761 ggcggggaga tccttgatcg cgcaggcatc ccaacgtttg catatccaga cgcggccgcg
     5821 cgcgcgtttt gcgcgatgtg gcgctactcc cacaacctcg atgcactgta cgaaacgccg
     5881 gcgctgtccg cgaccgccga gatcgacaga tcaaacgccg aacagatcat caatcgcgca
     5941 agaaaagcac agcgcacgct gctgaccgaa atagaatcca agcaactcct gacagcctac
     6001 ggaattccga ccgtcgaaac aaaaatcgcg aagagcgagg aggaagctgt cgagcttgcg
     6061 aaaaagatcg gcggcgcagt tgtgctcaag attttttctg aaaccatcac tcacaaaagc
     6121 gacgtgggtg gcgtgaaact caatttgcgc ggcgcagctg ctgttcgccg cgcgtatcgc
     6181 gagattagag attccgccgc gcacctgtca gaaggtaggg cgggcagtcc tctgcccgcc
     6241 gtttctctcg acgcaaaaga cggcgcgcac ggagtgacgc gccctgccac cgcatacttt
     6301 ctcggcgtaa ccgtacagcc gatgatcgcg cacgatggtt acgagcttat actcggcagt
     6361 agcatcgatt cccaattcgg gccggtgctt ctattcggca caggcggata ttttgttgag
     6421 gttttcaagg atcgcgcgct cggccttccg ccactgaatc gcaccctggc gcggcggcta
     6481 atggaacgaa cacaaatcta caacgcactc aaaagaggtt ttcgcggccg cgagccgatt
     6541 gatctgcccg cactggaaga cttgctggta cgcttcagcc agttggtcat cgaacagcgc
     6601 tggattaagg aaatcgacat caatccgctg cttatttcac ctaaacaaat ggtcgcgctc
     6661 gatgcgcgcg tggtcttgca cgattcgcaa acacgcgaag ccgaacttcc acgatcgcca
     6721 atcaggccat acccgaccga ttacgtgacc acgcgaaaaa tcggcggcgt tgaagtgacc
     6781 attcgtccaa tccggccgga ggacgagccg ctcatgatca aatttcacaa aacgctttcc
     6841 gatcgcagtg tgcatctacg ctattttgga cttgtgagcc ttgaaaggcg gatcatgcac
     6901 gaacgcctgc gccgggtttg tttcatcgat tacgaccgcg agatcgcgct tgttgccgat
     6961 ctaaagaatc gcgacggcac tcaccagatt ctcggcgtcg gacgtttgat taaagaacac
     7021 ggaataaacg aggcggagtt tgccgttctg atcagtgacc cgtggcaggg gaaaggtttt
     7081 gggtcggaga ttttgaaact gctggtgcaa gtcggacgca aggaatgttt gcgtcgcatc
     7141 accggccata ttgctccaga gaacacgacg atgaaaaccg tgagtgaaca agtcggcttc
     7201 aaactgtgtt tcaatcccga ggcggacgag tggctggcgg agatcgcctt gtaagcgttg
     7261 cctgcacgga tcggctgttc caggtttgct acacacgccc gacggcgggc gatgtcacca
     7321 cgcggacgcc tgacgaacgt caacaactcc ccacagcatg gcccgatcct ccgcggcatg
     7381 gttggtttcc gtcgcgcatg gaggttcgtg gaagctacga agcactacca tcgcaccagg
     7441 tgcagcagcg cgtttcaccg caacgaataa tcgctgcgcg tacgccggat ttgctccatc
     7501 gagaatgttt gaaagagaaa atccagtgaa gctccctgct aactggtgtt caagaaaatc
     7561 ggctgcgtcg gcgcatcgaa cttcaatctg ccggagcgca ggagtgtccg agccaaagcg
     7621 cgtgtctccc gcaagcaggg catacgcata cggattccta cgattggggt gcagcgagaa
     7681 acagcgctcc attcgcgctc gtaatacagt tccgaaattc ggcggcagac catcaagaaa
     7741 tgcggcggag taaaccgacc taagaaacag gtgcgagaat agaaaagaaa acgcggcacg
     7801 aaatcggcgc gtatcaagat ggcgtcgcca aaagaggatt tgctgcgcct gatcgtccag
     7861 atcgaggaat gttcgtaccc ttcgtgtgtg ccatcctgcg agaggcccga gggtgcgcgc
     7921 aaatgctaga atgcgttccg cgctgccccg ctgaacggcg ccgccgccga gacgcttctg
     7981 cacgtaggca atctgaacgg gattaatgtc aaccgccacc accgtatgat gggcggcgag
     8041 tttcatcgcg gtgcagccag cagaggcgat gcagaagata cgtccgccag gctggaacac
     8101 acgaagctca attgcggcgt cttcatgcat gcacccgaat agcaggctgc gtcgtccggc
     8161 tcgcgctgct cggaagcagc cattttgcca ggccgttatg ggcgcagtgg aactcacgtc
     8221 caaaccggaa aactcgcaga aacccacacg agcacgagga aggcgaaatt tttgatcacc
     8281 attccagccg gatcgtcaat
//
LOCUS       DATDAJ010000337         3741 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1935518, whole genome shotgun sequence.
ACCESSION   DATDAJ010000337 DATDAJ010000000
VERSION     DATDAJ010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3741
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1935518"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            356..1021
                     /locus_tag="VIS53_08325"
     CDS             356..1021
                     /locus_tag="VIS53_08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767826.1"
                     /translation="MQQPQLIARDICKSFRMGARRIEVLRRISMDIAHNETVFLSGAS
                     GAGKTTLLYTLAGLERPESGTVKFEGRELYSGSSSAEARLRNEKMGFVFQGYFLLHEL
                     TALENVLLPGMIGRRVIKGEAEESLAAVGLADRMHHLPAELSGGEQQRVAIARALTNN
                     PDIIFADEPTGNLDSKTGDAIMDLLLNLARDRRKTLLVVTHDARLATRGDRQLHIVDG
                     VLQ"
     gene            1089..2078
                     /gene="ilvE"
                     /locus_tag="VIS53_08330"
     CDS             1089..2078
                     /gene="ilvE"
                     /locus_tag="VIS53_08330"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEY5767827.1"
                     /translation="MKTTDATVLDEPKAHRRATEETIEPAIESRPRPTTGVREAKIYI
                     DGKFYSEANAKVSVFDHGLLYGDGIFEGIRFYNGRVFRLEQHLERLWNSARSICLEIP
                     ITGQEMTEALLETIRQNHLRDGYIRLVVTRGVGNLGLNPEQCKNPSVIIIVATIALYH
                     EDFYRKGLSIFTVATRRSNPASLNPAVKSLNYLNNVMARIEANLASADEALMLNDAGN
                     VAECTADNIFIIKHGQIFTPPITAGALQGITRSVVFDIAGEFDIKVIEADFTRHDIFV
                     ADECFLTGTAAEIVPVVKADGRIIGNGKPGPITTRIVARFREMTQKTGTPIFD"
     gene            2165..2662
                     /locus_tag="VIS53_08335"
     CDS             2165..2662
                     /locus_tag="VIS53_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEY5767828.1"
                     /translation="MLCDVCKCNDATVFLTQILEGKMHKVNLCEACSKEKGVQDPTSF
                     ALADLLLGIGAAEEIEKGAPAKKCLVCGFSQADFKKTGRLGCSECYATFAEGLGSLLK
                     AMHKGTEHVGKLPERAQRTVALNQRMRALTENLQKAVADENYESAASLRDQIKQLETD
                     LSNSV"
     gene            2659..>3741
                     /locus_tag="VIS53_08340"
     CDS             2659..>3741
                     /locus_tag="VIS53_08340"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0046314 - phosphocreatine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEY5767829.1"
                     /translation="MKFSSMLSTAGEWLRGEGPHHQVVISSRVRLARNLRNRAFPGWA
                     KKAERTSILEQIRVRVEALPEMQDAFSEGLQDLAALDKQVLVERHLISREHAAKGAGS
                     AVVVNRRQTLSVMINEEDHLRMQSIRSGLQLKQAFKLVDKIDTALESKLDYAFDPQLG
                     YLTACPTNVGTGMRASAMLHLPGLVLSELINQVIQAVSKIGLAVRGLYGEGTEAMGNL
                     FQISNQTTLGEKEEDIINRLTKVIETIIDKEHDARQTLLQRKPSTLCDQIGRAYGVLT
                     YAHAMPSKEALNLLSVIKLGMDLGAFPEHHRLQIDELFIETQPAHLQKNSQQKLNAEE
                     RDYLRAQIIRDRLKVFPKPDISKMVKD"
BASE COUNT          932 a          934 c         1043 g          832 t
ORIGIN      
        1 cagcgcgatc atgggcttta caccacatcc accatcgatc agccgacact tcaatcgcta
       61 ggcatgtcat agcgaacaag ggtgctgatt ttgcaaagag ccgcctcgaa tgatttcgac
      121 ggcggctttt tgttggaaat acctgtgcag cgattctcct tagataacct ccgcaataga
      181 tcagcccgcg cttgaattgc tagacgtgac ataaatgtga ggacagcgcg gatgttcctc
      241 tggcgtttct caagctctac ttgcgccgaa agacaatctg gcaacgtacc agccggcggc
      301 agctttttgt catcgcgctc ttgcgccaga acaaattcgc gggagatact tgcttgtgca
      361 gcagccgcaa ctgattgccc gcgatatttg caaatcgttt cgaatgggtg cccggcgaat
      421 tgaagtactg cgtcggatat caatggacat cgcccacaac gaaacggttt ttctttccgg
      481 tgcatccggc gcgggcaaga cgacgctgct ctatacgctg gcggggttgg aacgtccgga
      541 atcaggaacg gtgaaattcg aaggacgcga gctttatagc ggtagctcgt ctgcggaagc
      601 gcgtctgcga aacgaaaaaa tgggctttgt atttcagggc tattttttgc tgcacgaact
      661 gaccgcactc gaaaatgttc tgctgccggg aatgatcggg cgtcgtgtaa ttaagggaga
      721 ggctgaggag agtttggccg cagttgggct ggctgatcgc atgcatcatt tgcccgcaga
      781 attgtcgggc ggagagcagc agcgcgttgc gattgcgcgg gcattaacaa ataatcccga
      841 cattattttt gccgacgagc caacgggaaa tctcgattct aaaacgggcg acgcgatcat
      901 ggatctgttg ctaaatctgg cgcgcgaccg caggaaaact cttcttgtcg tgacacatga
      961 tgctcgtctg gcaacgcgcg gcgatcggca gttgcacatc gtggatggag tactgcagtg
     1021 actccgcttg cgccgccggc tttgtggttt gaattgcgcg cataaacatt tgaggttttg
     1081 ttgctaatat gaaaaccact gatgcgacgg tgttggatga accaaaagct cacaggcgtg
     1141 cgaccgagga aacaattgaa cctgcaatag aaagtcggcc gcgtccgacc acgggcgtca
     1201 gggaagcgaa gatttacatc gatgggaaat tctattcgga agcaaatgca aaggtttcgg
     1261 tgttcgatca tggtttgctc tacggcgatg gaattttcga gggcatacgt ttttacaacg
     1321 gccgcgtttt tcgcctggaa caacacttgg agcggctctg gaattcagcg cgttcgattt
     1381 gtctcgaaat tcccataact gggcaggaaa tgacggaggc attgcttgaa acgattcgac
     1441 aaaaccattt gcgtgacggt tacattcgtc tggttgttac acgcggagtt ggcaacctgg
     1501 gtttgaatcc ggagcagtgc aaaaatccga gcgtgattat cattgtggcg acgatcgctc
     1561 tttatcacga ggatttttac cggaaaggac tgagcatttt tactgtcgcg acgcgacgca
     1621 gcaatcctgc atcactcaat ccggcggtta aatcgttgaa ctatttgaac aacgtcatgg
     1681 cgcggatcga agccaacctc gccagcgctg atgaagcatt aatgttgaac gacgcaggaa
     1741 acgtcgccga atgcactgcc gacaacatct tcatcatcaa acatggccag atcttcacgc
     1801 ccccgatcac ggccggagcg ttacaaggaa tcacgcgatc ggtcgtgttt gatattgccg
     1861 gcgagttcga tatcaaagtg atcgaggcag atttcacgcg gcacgacatt ttcgtggccg
     1921 acgaatgctt cctcacggga actgctgccg aaatcgttcc agtggttaaa gccgatggcc
     1981 gcattatcgg aaacggaaaa cccggcccga tcacaacgcg catcgttgcg cggttccgcg
     2041 aaatgacgca gaaaactggc acgccgattt tcgattaagt agcaaggatc gccgagcgag
     2101 acgatactag agcaatgtgt atcggcttga atgtttccag cagatcgcgg tctaactaac
     2161 agagatgttg tgcgacgttt gcaaatgtaa tgatgcgaca gttttcctga cacagatcct
     2221 cgagggcaag atgcacaagg taaatttgtg cgaagcttgc tcgaaggaaa aaggtgtcca
     2281 ggacccgacc agttttgcgc ttgctgattt gctgctgggc atcggggcag ccgaagaaat
     2341 tgaaaaagga gcaccggcaa aaaagtgctt ggtgtgcggt ttcagtcagg cggacttcaa
     2401 gaagacaggt cgccttggtt gcagcgaatg ctacgcgacc ttcgccgagg gtttgggttc
     2461 actgttaaaa gcgatgcata aagggaccga acacgtcgga aaattgccgg aacgcgcgca
     2521 gcgcaccgtg gcactgaatc agcgaatgcg cgccctcacc gaaaatctac agaaagccgt
     2581 ggctgacgag aactacgaga gtgctgcctc gctgcgcgat caaattaaac agctcgaaac
     2641 cgacctttcg aattcagtat gaagttttca agcatgcttt ccactgcggg ggaatggttg
     2701 cgcggcgaag gtccgcatca ccaggttgta atcagcagcc gcgtccgcct cgcgcggaat
     2761 ttgcgcaatc gtgcttttcc cggatgggcg aagaaagcgg aacgcacgtc aatcctcgaa
     2821 cagatccggg tacgcgtcga agcgcttccg gagatgcagg acgcattttc cgaaggcttg
     2881 caggatctgg cggcgttgga caaacaggtg ctggtcgagc gccacttgat cagtcgcgag
     2941 catgccgcga agggcgcggg cagcgcggtg gtggtgaacc ggcgtcaaac gctcagtgtc
     3001 atgatcaacg aagaagatca tctccggatg caatccattc gttccggtct tcaattgaag
     3061 caggcattta agctggtcga taagatcgac accgcgcttg aaagcaaact cgactacgcc
     3121 ttcgatccgc aacttggata tttgaccgct tgcccgacca acgtcggcac cgggatgcgt
     3181 gcttctgcga tgctgcatct gccggggctt gtcctgagcg agctgatcaa ccaagtcatt
     3241 caggcggtca gcaagatcgg gctcgcggtg cgcggccttt acggcgaagg caccgaagcc
     3301 atgggcaatc tttttcagat ttcgaatcag accacgctcg gtgaaaaaga agaagacatc
     3361 atcaatcgtc tgaccaaagt catcgagacg attattgata aggaacacga cgcgcgtcag
     3421 actttgctgc aaagaaaacc gagtacgctt tgcgaccaga ttggtcgtgc ctatggcgtg
     3481 ctaacttacg cgcatgccat gccatcgaag gaagcgctca atctgttgtc ggtcatcaag
     3541 cttggaatgg acctcggcgc gtttccggaa catcaccgcc tgcaaatcga cgaattgttc
     3601 atcgaaacac aaccggcgca tctgcaaaag aactcgcaac aaaagttaaa tgctgaagag
     3661 cgcgactatc tgcgggccca gataatccgt gatcgtttga aagtcttccc caaacctgat
     3721 attagtaaga tggtaaaaga c
//
LOCUS       DATDAJ010000338         6320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1936177, whole genome shotgun sequence.
ACCESSION   DATDAJ010000338 DATDAJ010000000
VERSION     DATDAJ010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6320
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936177"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VIS53_08345"
     CDS             <1..219
                     /locus_tag="VIS53_08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEY5767830.1"
                     /translation="ENRISVERGNFNKTVQDYNVAVRSFPTNLIAGMLGFPPKPFFTA
                     QPGAEKPPPVQFNFSSPAPAAPAATAGP"
     gene            221..1066
                     /locus_tag="VIS53_08350"
     CDS             221..1066
                     /locus_tag="VIS53_08350"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEY5767831.1"
                     /translation="MKLIFGGSASPKTMPNQPRRSRLVVPSRSEHAIRLFLAALTVFA
                     ITANAAEVIPPTPGAYFNDYAGVVSKEAASRFNEQLAQFERDTSDQVVVAVFPKMQSD
                     SDIADYTQRVAQAWGVGQKEQRNGVVLFVFIEDRKMFIQVGYGLEGALPDATAFDITE
                     RHIKPLFRTGNYEAGLATGIDLICKAIRGEYKGSGKTVAERKGGGGAVTGLLPLIIFI
                     IVLIVLSRLFRKLGGYSYSSRGGGPVFIPSGGGWSSGGGSGGGFSGFGGGGGSFGGGG
                     AGSSW"
     gene            1071..1508
                     /locus_tag="VIS53_08355"
     CDS             1071..1508
                     /locus_tag="VIS53_08355"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEY5767832.1"
                     /translation="MRTREFLSKLEHDRIIQAIGEVESKTSGEIRVLIQRGKLKSDPL
                     VAALRKFQRLGMHKTRERNAVLIFVAPRVHKFAVVGDHAIHERCGAELWQRVVKRMRT
                     HFQNEKFSDALVEAVNEIGTVLEKQFPKTVCDTNELPNDVIES"
     gene            1773..2795
                     /locus_tag="VIS53_08360"
     CDS             1773..2795
                     /locus_tag="VIS53_08360"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEY5767833.1"
                     /translation="MPKTLTKDESTATDTYAKFIAEPFEAGYGHTVGNSLRRVLLSSL
                     EGAAITAVKIAGAQHEFATLPGVVEDLTDIVLNLKKVKFKLDGQDHEPKKLSLIVNKE
                     GEVTAGDIQTIQGFEVLNPKQLICTLDKKHKFDAELEVRVGRGFATGEENKRPDQPIG
                     LIPIDSIFSPVTRVKYAVENTRVGQRTDYDKLILEMWTDGRLSPDDALLQASAILRHH
                     LDVFVHYNEEVIEFDQTPAGVSEENIKLKKLLNMSVNEIELSVRAANCLNNANITTVG
                     QLAQKTEAEMLKYRNFGKKSLNEIKDKLQHLGLGLGQKFEPGLIDLPISADGAAPVAA
                     PATGQE"
     gene            2827..3402
                     /gene="rplQ"
                     /locus_tag="VIS53_08365"
     CDS             2827..3402
                     /gene="rplQ"
                     /locus_tag="VIS53_08365"
                     /inference="COORDINATES: protein motif:HMM:TIGR00059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY5767834.1"
                     /translation="MRHQKKTIKLGRTADHRRALLANQVCALIEHQRIKTTLAKAKAV
                     RPLAERMVTLGKNGSIHARRRALAVLRQKDIVKKLFDDIAQRSAERNGGYTRIVKLGA
                     RKSDSARMAFIEWVDAEHVAEEKPKKEKKAKRKEPEAEPQQITPEAEQTTREEPKPEA
                     PALEQEEVAPPPSEEPKPKKRRWFGRKSDDS"
     gene            complement(3493..3684)
                     /locus_tag="VIS53_08370"
     CDS             complement(3493..3684)
                     /locus_tag="VIS53_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767835.1"
                     /translation="MRKTARKSRSFSEADKADSDFYKKLTGNERLQILVELLNHDPEQ
                     KLERVPGIIKFPRRHLAEH"
     gene            3741..4115
                     /gene="ndhC"
                     /locus_tag="VIS53_08375"
     CDS             3741..4115
                     /gene="ndhC"
                     /locus_tag="VIS53_08375"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY5767836.1"
                     /translation="MNPHPYFFIVIFIGVALVFPLFPLALAWLWRRFFQPPKPGPDKT
                     STYECGVESIGDAQIQFHAQYYLYAIIFLIFDVEAVFLVPFAVAFTGLPFGAFIAILI
                     FLLLLIEGLVWAWGKGCLQWQR"
     gene            4217..4834
                     /locus_tag="VIS53_08380"
     CDS             4217..4834
                     /locus_tag="VIS53_08380"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF011394.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEY5767837.1"
                     /translation="MSQIDEQLRTELQRQGVWVTSMQDLYNWGRKNSIWPLQFGLACC
                     AIEMIATAASRYDIARFGGEVFRPSPRQADLMIVAGTVTKKMAPQIVRLYNQMADPKY
                     VIAMGACAISGGPFKQGYNVLKGIDRYIPVDVYIPGCPPRPEALLHAFMELQRKIDDQ
                     KLTGADRAEFLKPEQLSEFPVPKFGKHDLEPSVNPNVFQPPVIER"
     gene            4939..5601
                     /locus_tag="VIS53_08385"
     CDS             4939..5601
                     /locus_tag="VIS53_08385"
                     /inference="COORDINATES: protein motif:HMM:NF012549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY5767838.1"
                     /translation="MESLEQIKTRIESAVAGTRMEIVQNGSPSQQHSLLIDNEHAVAV
                     ARFLRVDPALRLDFCSNVTGVDWPDRTVKNTTKMKKLVDGQEKEIVETTEEKIPGYLE
                     SVYHLYSMTHKHGPVIIRMRTRDRVSGARLSSLTLIWRSAEFQEREIFDLYGIQFEGH
                     PDLRRILMWDEFEDYPMRKDYREPNDYEWEPTPHDEVLEKARQHYQPRPQIDGAEGVV
                     NR"
     gene            5625..>6320
                     /locus_tag="VIS53_08390"
     CDS             5625..>6320
                     /locus_tag="VIS53_08390"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY5767839.1"
                     /translation="MSATVETIEAFERPPVSMGSRLEGELLEVSMGPQHPSTHGVFRM
                     NVALEGEVVRKLKPVFGYLHRNHEKIGENTSYLGSMPYTDRLDYLCSMTNNWAYALSV
                     EKLAGIEVPERAEYLRVILAELTRLQNHASLLGFLLSDMGAWGTPLMYAFREREKILD
                     LFESLSGSRLMCDFMRFGGCRVDASDEWLARAKQIVDRFPKFLDEFEELILGNEIVIG
                     RTQNVGNLSAELAV"
BASE COUNT         1489 a         1669 c         1802 g         1360 t
ORIGIN      
        1 gaaaaccgaa tctccgttga gcgcggcaac ttcaataaga cggtgcagga ctacaatgtg
       61 gcggtgcgca gtttcccaac aaatttgatc gcaggcatgc tcggttttcc cccgaaaccg
      121 ttcttcaccg cgcaaccggg agcggaaaag ccgccgccgg tgcagttcaa tttcagctcg
      181 cccgctccag cggcgcccgc agcgacagcc gggccgtaat gtgaagttga tctttggtgg
      241 atcggcttct ccgaagacga tgccgaacca accgcggcga agccgcctag ttgtcccatc
      301 ccgttcggag cacgcgatcc gcctttttct ggccgcgctc acggtgttcg cgatcactgc
      361 gaacgcagcg gaagtaattc caccaacgcc tggcgcgtat tttaatgatt acgccggcgt
      421 tgtttcgaaa gaagccgcat ctcgtttcaa cgagcagctt gctcaattcg agcgtgatac
      481 ttccgaccag gtcgtggtcg cggtttttcc caaaatgcag agcgactcgg atatcgccga
      541 ttacacacag cgcgtggcac aggcgtgggg ggtgggccaa aaggagcagc gcaacggtgt
      601 ggttctcttt gtgtttatcg aggaccgcaa gatgtttatc caggtcggct acggcttgga
      661 aggcgcgctg ccggacgcca cggcattcga catcactgag cgtcacatca agccgctatt
      721 tcggaccggc aattatgagg ctgggctggc gactggtatc gatctgatct gcaaagcgat
      781 ccggggcgag tacaaaggat cgggaaaaac agtagcggaa cgcaagggcg gcggtggggc
      841 ggttaccggt cttttgcccc tcatcatctt tatcatcgtg ctgatcgtcc tttcgcgcct
      901 attccgaaaa ctcggcggtt acagctattc atcccgagga ggtggccctg tgttcattcc
      961 gagcggcgga ggctggtcgt ctggtggcgg cagtgggggc ggattcagcg ggttcggcgg
     1021 aggcggcggc agtttcggcg gtggtggcgc gggatcgagc tggtgatcaa atgcgaacgc
     1081 gagaattcct tagcaaactc gagcacgacc ggattattca agcgattgga gaagtcgaat
     1141 cgaagacctc aggtgagatt cgcgttttga tccagcgcgg gaaattgaag agtgatcctc
     1201 tcgttgccgc actgaggaag tttcagcggc tcggtatgca caagacgcgc gaacgtaatg
     1261 cggtgctcat tttcgtcgcg ccgcgtgttc ataagttcgc cgtcgtcggc gaccatgcca
     1321 ttcacgaaag atgcggcgct gaattgtggc aacgcgtcgt gaaaagaatg cgaacgcatt
     1381 ttcaaaatga gaagttcagt gatgcgttag tcgaagcggt caacgagatc gggacagtgt
     1441 tggagaagca attcccgaag acggtgtgcg acacaaatga actgccgaat gacgtgatag
     1501 agagctaatc ggccccccca acagctgctt gcaaaaccgc gcaaatcgtc tttattccaa
     1561 gctccgcagc gagttttgaa attacgccgt tggtccctgg gtctccgtcg ctggatgtga
     1621 gatcgcgctc gccaggggga acccggcgat agaaggaagt tcgatttaag atttccgagt
     1681 ttcggttgtc cggtctttgc cggtgttcaa tcgcaaatcg caaatcgaca ttcgaaaatt
     1741 aaaagatgcc tatccgttac ggtcgttttg aaatgccgaa aactctcact aaagacgaga
     1801 gcacagcgac agatacctat gcaaagttca tcgccgagcc gtttgaggcc ggctacggtc
     1861 acactgttgg gaactccctc cggcgcgtcc tgctttcctc actcgaaggc gcggccataa
     1921 ccgcggtaaa aatcgccggc gcgcagcacg agttcgccac gttgcccggc gtggttgagg
     1981 acctgaccga catcgtccta aatctcaaga aagtgaaatt caaactagat ggccaggacc
     2041 acgagcccaa gaaactgtct ctcatcgtga acaaagaagg cgaggtcact gccggcgaca
     2101 ttcagacgat tcaaggtttt gaagtgctga atcccaagca attgatctgt acccttgata
     2161 aaaaacacaa attcgacgcg gaactcgaag tgcgcgtcgg ccgtggattt gctacgggcg
     2221 aggaaaacaa gcgccccgat cagccgatcg gcctcattcc catcgactcc atcttttcac
     2281 cggtcacgcg agtgaagtat gcagtggaaa atactcgggt cggtcagcgc accgattacg
     2341 acaaactcat tcttgagatg tggaccgacg gccgactatc tccagatgac gcgctgctcc
     2401 aggcgtccgc gattctccgg catcacctcg acgtcttcgt ccactacaac gaggaagtga
     2461 tcgaattcga tcagacgccg gctggcgtga gcgaagaaaa catcaagctg aagaagctcc
     2521 tcaacatgag cgtcaacgag atcgagctga gcgtgcgcgc agccaattgc ttgaacaatg
     2581 cgaacatcac cacggtcggg cagctcgccc agaagaccga ggccgaaatg ctgaagtatc
     2641 ggaacttcgg caaaaaatcg ctcaatgaga tcaaggataa actgcaacac cttgggttgg
     2701 gtttgggcca gaagttcgag ccgggcttga tcgatttgcc gataagtgcc gatggcgctg
     2761 cgccagtggc cgcacctgct actggccaag agtaaacgtc tgtgcgaaga tcgcgttccg
     2821 tcgcgtatga gacatcaaaa gaagacgatc aagctggggc gcaccgcgga ccaccgcagg
     2881 gcgttacttg ccaatcaggt ctgtgcttta atcgaacatc agcgaatcaa gacgactttg
     2941 gctaaggcca aagcggttcg tcctctcgct gaacggatgg tgactctcgg taagaacggc
     3001 tcgattcacg cgcgtcgcag ggcactggcc gtgttacggc agaaagacat cgtgaaaaag
     3061 ttattcgacg acatcgcgca acgttccgcc gaacggaacg gcggttacac ccgcatcgtc
     3121 aaactcggcg cgcgcaagag cgattctgcg cgcatggcgt ttatcgagtg ggtggacgca
     3181 gaacacgtcg ccgaggaaaa gcctaagaag gaaaagaaag cgaagcggaa agaaccagag
     3241 gcagaacccc agcagataac gcctgaagcg gagcagacca cgcgagaaga accaaagccg
     3301 gaagctcccg ctctggaaca agaggaagtc gccccgccgc cgtccgaaga accgaagccg
     3361 aagaagcggc gttggttcgg acgaaagtca gacgacagct aaaattagct gtcgcggcgt
     3421 tcacgcagtt ctagccggta cgattgtcct tcgcgagatg ctgagcccgc gtcggcgtgg
     3481 gaatattagc ctctagtgct ccgcgagatg acgccgcggg aatttaataa ttccaggaac
     3541 tctctccagt ttttgctcag ggtcatgatt gagaagctcc accagaattt gcaaacgttc
     3601 gttgccggtt agttttttgt aaaaatcgct gtcagctttg tcagcctcag aaaagctgcg
     3661 agattttctc gctgtttttc tcacgccgta actataagct tggcagcgat cgcttccgag
     3721 cgaatttgat cggggactgg atgaatccgc atccgtattt tttcatcgtc attttcattg
     3781 gcgtggcgct ggtgtttccg ctgtttccac tggcgctggc ctggctgtgg cggcgatttt
     3841 tccaaccgcc aaagcccggt ccggacaaga cttcgaccta cgaatgcggc gtcgaatcga
     3901 tcggcgacgc gcaaattcag ttccacgcgc agtattatct gtatgccata atctttttga
     3961 tcttcgacgt tgaggccgtg tttctcgtgc cgtttgcggt cgcattcacc ggtttgccgt
     4021 tcggagcgtt tatcgcgatt ttgatttttc ttctgctact catcgaaggg cttgtctggg
     4081 cgtggggtaa gggatgtttg caatggcagc gctagcacgc tcacgcgctg gttaaaaaag
     4141 ctaaaagagt tacattgtta caagcagcga gcttcctggc cgcaatgtaa ccttgtaact
     4201 cttgtaacga gaatccatga gccaaatcga cgaacaactg cgcaccgaat tgcaaaggca
     4261 gggagtgtgg gtgacttcaa tgcaggatct ttacaactgg ggacgcaaaa actcgatctg
     4321 gccgctgcag ttcggactgg cctgttgcgc tattgaaatg atcgccactg cggcatcccg
     4381 ctatgacatc gcccgcttcg gtggcgaagt gttccgtccg tcaccgcgtc aggccgatct
     4441 catgatcgtt gctggaacgg ttacgaagaa aatggcgccg caaatcgtgc ggctttacaa
     4501 ccagatggct gatccaaaat acgtgatcgc catgggtgca tgcgcaattt ccggcggccc
     4561 ttttaaacag ggttacaatg ttctcaaagg catcgaccgt tatatcccgg tcgatgttta
     4621 catccccggc tgccctccgc gcccggaagc gttgcttcat gcattcatgg aattgcaacg
     4681 caagatcgac gatcaaaagt tgaccggcgc agatagggcc gagtttctca agccagagca
     4741 actaagcgag ttccccgtgc caaagtttgg aaagcacgac ttggaaccgt cggtgaatcc
     4801 gaatgtgttt caaccacctg taatcgaacg atgattgttc agggtggatc gcgttgtcct
     4861 caacgcgatg tgatacaggc gccggaggcg cagttattct tcgtatcgtc tttggagaag
     4921 tcgatccacc ttttttaaat ggaatccttg gagcaaatca aaacgcggat cgaaagcgcc
     4981 gtggccggca caaggatgga aatcgtgcaa aacggcagcc cctcgcagca gcactcatta
     5041 ctgatcgata acgagcacgc cgtcgcggtt gcgagatttt tgcgcgtcga tcccgcgctg
     5101 cgtctggatt tttgctccaa cgttaccggc gtcgattggc cggatcgcac ggttaagaac
     5161 acgactaaga tgaaaaaact ggtcgatggc caggaaaagg aaattgtcga aacgacagag
     5221 gagaaaattc cgggatatct cgaatcggtt tatcaccttt actcgatgac gcataaacat
     5281 ggcccagtca tcattcgcat gcgcacccgc gatcgtgtat cgggcgcgcg cttatcgtca
     5341 ctcacgctga tctggcggag tgccgaattc caggagcgcg agattttcga tctgtacggc
     5401 atccaatttg aaggacatcc cgacctgcgc cggattttaa tgtgggacga gtttgaagat
     5461 tatccgatgc ggaaagatta ccgcgagccg aacgattacg aatgggaacc gacgccgcat
     5521 gacgaggtgc tcgagaaagc gaggcagcat taccagccgc gaccacagat cgatggcgcg
     5581 gaaggcgtcg tgaaccgttg aaggggcgaa gcgttgaacc ggaaatgagc gcgacagttg
     5641 aaacaatcga agcattcgag cgaccgccag tcagcatggg ctcgcggctc gaaggcgaat
     5701 tgctcgaagt atcgatggga ccgcagcatc catccacgca cggagtgttt cggatgaatg
     5761 tagcgctcga aggcgaggtc gttcgcaagc tcaaaccggt cttcggttat ctgcatcgaa
     5821 atcacgagaa aatcggcgag aacaccagtt acctcggctc gatgccgtac actgaccggc
     5881 tcgattattt gtgctcgatg accaacaact gggcgtacgc gcttagcgtt gagaaactcg
     5941 ccggaatcga agttcctgag cgcgccgagt atctacgcgt cattctcgcc gagctgacgc
     6001 ggttgcagaa tcacgcctcg cttctgggtt ttttgctcag cgacatgggc gcctggggca
     6061 cgcccttgat gtacgcgttc cgcgaacgcg aaaaaatcct ggatcttttt gagtcgttat
     6121 ccggttcgcg actgatgtgc gatttcatgc gattcggcgg ctgccgggtg gacgcgagcg
     6181 atgagtggct cgcccgagcg aaacagattg tcgatcggtt cccgaagttt ctcgatgaat
     6241 tcgaggaact gatactcggc aacgagatcg tcatcggtcg cacccaaaat gtcggcaacc
     6301 tgtccgccga actggcggtc
//
LOCUS       DATDAJ010000339         3064 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1936812, whole genome shotgun sequence.
ACCESSION   DATDAJ010000339 DATDAJ010000000
VERSION     DATDAJ010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936812"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..976)
                     /locus_tag="VIS53_08395"
     CDS             complement(113..976)
                     /locus_tag="VIS53_08395"
                     /inference="COORDINATES: protein motif:HMM:NF012885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HEY5767840.1"
                     /translation="MVRNGVTLIECPRDAWQGLSRQIPTEFKTRYLRALIDAGFKHID
                     AVSFVSPKAVPQMADSEKVLEQIDLPNDVEIIAIVVNEKGAERAIATQAVSTLGFPCS
                     ISETFLRKNQNQTLDECYKVLESIKRKADSTGLSMVAYISMAFGNPYGDPWDQTQVRE
                     ALNKLVDLDIQSVSLADTVGMSGPDLIRSVFESVTSQYPNFDIGVHLHSAPASAESKV
                     LAAYDAGCRRFDSAVGGLGGCPFALDALVGNIPTECLLAALKQRGVELPISNAFQNVV
                     SLNSLIAADYS"
     gene            complement(990..2135)
                     /gene="dnaJ"
                     /locus_tag="VIS53_08400"
     CDS             complement(990..2135)
                     /gene="dnaJ"
                     /locus_tag="VIS53_08400"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY5767841.1"
                     /translation="MATEKRDYYEVLGVERNAAGEEIKRAYRKLAVKFHPDKNPDDPH
                     AEEKFKELGEAYDVLMDPDKRAAYDRFGHAAFAQGGAGFGGGGFHDPFEIFREVFGGS
                     GFGGGIFETFFGGGPGARSDDRRRGSDLRYDMEIKLEEAAFGAEKTIEIEKLDACDKC
                     HGSGAEPGSRKTSCPTCAGRGQVISSRGFFHVSQTCPRCHGAGEIIEKPCQKCGGEGR
                     IEKLSRIKLKIPAGIREGTRLRSPGNGEAGIGGGAAGDLYVVVHIKEHNIFHREADDL
                     YCEVPIPFSVAALGGEIDAPTLEGKALVKVPAGTQSGQMFKLRGKGITNVNGRSHGDL
                     FVRLIVEVPSRLNPEQRRKLEEFVALCGDENTPMRKSFFDRAKEFFK"
     gene            complement(2195..2749)
                     /gene="grpE"
                     /locus_tag="VIS53_08405"
     CDS             complement(2195..2749)
                     /gene="grpE"
                     /locus_tag="VIS53_08405"
                     /inference="COORDINATES: protein motif:HMM:NF010738.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY5767842.1"
                     /translation="MKKIPSREREEEMNSSVQSKQPSPTAAGDADSDDAMAGLQADLY
                     RFRDLALRSQADFDNYKKRAAREKEDAVKYANSSLLQRLVSILDNFELGLAAAKTESE
                     HSPIYSGMVLVQKQLNDLLEENGLQAIEAEGKKFDPNLHEAIAHEASEAAEGTVVRQA
                     RRGYRFKDRLLRPARVVVSSGPAK"
     gene            complement(2746..>3064)
                     /locus_tag="VIS53_08410"
     CDS             complement(2746..>3064)
                     /locus_tag="VIS53_08410"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEY5767843.1"
                     /translation="QTVTPIKSPGMVVGIDSGSVFDRLTVDFSVPLERNDCLVLYTDG
                     VTETLNSEGDEYGVDRMSQSVRASANDGAQAIVKRIIEDVREFTGLVPQNDDITVIAI
                     RKT"
BASE COUNT          637 a          886 c          820 g          721 t
ORIGIN      
        1 caagacgttg cgcgcgtgat gggcttcgga gccgcgtaac gcgagtccaa gagggtccca
       61 gttctccggc gcaatgtaga agcgatgcat gagtcggatg ggttgaaccg acctacgagt
      121 agtcagctgc gataagcgag tttagcgaca ccacgttttg aaacgcattg ctgataggca
      181 gctccacgcc gcgctgtttc aaagcggcga gcaggcattc tgtaggaatg tttccaacca
      241 gtgcgtccag cgcgaatggg catccaccga ggccgccgac ggccgaatca aagcgacggc
      301 agccggcgtc atacgcggcg agtactttcg attcagccga ggcgggcgcg ctgtggaggt
      361 gcacgccgat gtcgaagttg gggtactgac ttgtcaccga ttcaaacaca ctgcgaatca
      421 aatcaggacc cgacatgccg acggtgtcgg caagcgaaac ggattgtata tcgagatcga
      481 caagtttatt cagcgcctcg cgaacctgcg tctgatccca cggatcgcca tatgggtttc
      541 caaacgccat cgaaatgtaa gccaccatgc tcagccccgt gctgtctgct tttcttttga
      601 tcgattccaa aactttgtag cattcgtcca gtgtctgatt ctggttcttg cgcaggaagg
      661 tctcggagat ggagcaaggg aaaccgagag ttgaaactgc ttgcgtggcg atggcgcgct
      721 cagcaccttt ttcgttcact acgatcgcga tgatttcgac gtcgttaggc aggtcgattt
      781 gttcaaggac cttttcgcta tcggccattt gcggaacggc cttgggggaa acgaagctaa
      841 ccgcatcgat gtgtttgaac cccgcgtcaa tcagggcgcg caggtaacgg gttttaaatt
      901 cggtgggaat ttgccggctg aggccctgcc acgcgtcgcg tggacattca atcagtgtga
      961 cgccgttgcg aaccacggaa gtgcagcgct tatttaaaga attcctttgc gcggtcgaag
     1021 aaacttttgc gcattggagt gttttcatcg ccacaaagcg cgacgaactc ctcgagcttg
     1081 cggcgttgct ctggattcag acgcgatggc acctccacga tcagccgcac gaataaatcg
     1141 ccgtggctac gcccgttcac gtttgttatg cctttgccgc gtagtttgaa catttgtccg
     1201 ctttgcgtgc ctgcggggac tttaacaagg gctttgcctt caagcgtcgg tgcgtcaatc
     1261 tcgcccccca atgccgcaac ggaaaacggg attggaacct cgcaatacaa atcgtcggct
     1321 tcgcggtgaa agatgttgtg ctctttgatg tggactacga cataaagatc ccccgctgca
     1381 ccgccgccga tccccgcctc gccatttccc ggcgaacgta atcgagtgcc ctcccggatt
     1441 cccgcaggaa tcttcagctt gattcggctt agcttttcga tacgcccttc gccgccacat
     1501 ttctggcatg gcttttcgat gatttcaccg gcgccgtggc aacgtggaca tgtttgcgat
     1561 acatgaaaga acccacgcga actaattacc tgtccgcgtc cagcacacgt cgggcaactt
     1621 gttttgcgcg agcctggttc ggcgccgctg ccgtggcatt tgtcgcaggc atcaagcttc
     1681 tcaatctcaa tcgtcttctc tgcgccgaaa gctgcctcct ccaactttat ttccatgtcg
     1741 taccgcagat ccgacccacg acgccgatca tcagagcgcg ctccggggcc gccgccaaag
     1801 aaagtctcga aaattccgcc gccgaatccg ctgccgccga acacttcgcg gaagatttcg
     1861 aatggatcat gaaaaccgcc gccgccgaaa ccggcacccc cctgcgcgaa cgccgcgtga
     1921 ccgaagcgat cgtacgccgc gcgcttgtct ggatccatca ggacgtcgta cgcttcgcct
     1981 agttctttaa atttttcctc ggcatgcgga tcgtccggat ttttgtcagg atggaacttt
     2041 accgcgagct tgcgataggc tcgtttgatt tcctcaccgg cggcatttcg ttcaacgccg
     2101 agcacttcgt agtaatcgcg tttctcagta gccatcaaag cgaaagtagc acgtgaccaa
     2161 ccaggctagt ctgcaaagca agcaagaccg ctcactactt cgccgggccg ctggaaacaa
     2221 cgacgcgcgc cggtcgcagc agacgatcct taaaccgata acctcgccgg gcttggcgga
     2281 cgactgttcc ttccgcggcc tcgctcgcct cgtgagcaat cgcttcgtgc aggtttggat
     2341 caaacttttt gccttcggct tcgatcgctt gcaatccgtt ttcctcaagc aaatcgttta
     2401 gctgtttttg aacgagaacc attcctgaat aaatcggaga gtgctcactc tccgtttttg
     2461 cggccgccag accaagctcg aaattgtcga gaatggagac cagacgttgg agcaacgagc
     2521 tgttggcgta tttcaccgca tcctcttttt cgcgggcagc gcgttttttg tagttgtcga
     2581 aatcagcctg gctgcgtagc gcgagatcac ggaatcggta gagatcggct tgcaagccgg
     2641 ccattgcatc gtcggaatcg gcgtcgcctg cagccgttgg ggaaggctgc ttcgactgca
     2701 ctgacgaatt catttcttct tcgcgttcac gggaagggat ctttttcatg ttttgcggat
     2761 ggctatcacg gtaatgtcat cgttttgcgg caccaaaccg gtaaactcgc gcacgtcctc
     2821 gataatcctt tttacaatcg cttgcgcgcc atcgttcgcg ctggcgcgaa ccgactgcga
     2881 catacgatca acgccatact cgtctccctc ggagttaagc gtctcagtca caccgtcggt
     2941 gtagaggacg aggcaatcgt tgcgctcgag cggtaccgaa aaatcgacgg taagcctatc
     3001 gaacacactt ccgctgtcaa ttcccaccac cattcccggc gactttatcg gcgttacagt
     3061 ttgc
//
LOCUS       DATDAJ010000340         5330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1938743, whole genome shotgun sequence.
ACCESSION   DATDAJ010000340 DATDAJ010000000
VERSION     DATDAJ010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5330
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1938743"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(116..1402)
                     /locus_tag="VIS53_08415"
     CDS             complement(116..1402)
                     /locus_tag="VIS53_08415"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY5767844.1"
                     /translation="MNAIIIRNGRVIDPANKRDEIADLYIADGKIVASKSEIRSPKSE
                     IEEVDALGLIVAPGLVDMHVHLREPGFSHKETIESGARAAAAGGFTTIVCMPNTAPVP
                     DNPGTIAWINDRASSVSRVNVLPTGAISKNLAGEELAPIGSLAQAGVVAITDDGHCIQ
                     NHELMRRAVEYARMVGVPVLDHCQDYNLVGNGVVHEGYWSTLLGLPGWPAAGEEAIVM
                     RNILLAELCDHHIHCQHISTAGSVRLLREARARGVKVSGEVCPHHIALTDDAIQNFDT
                     NYKTNPPLRSQNHVDALLAGIADGTLSILCSDHAPHANFEKEVEFDAAPFGIIGLETE
                     LGLFLNLLVHKHRTIDVARLIRMYTVEPSRLLKLDAGTLSIGARADVTLIDPELEWTV
                     KVDQFHSASRNSPFDGWKLKGRALRTIVEGKTVWKL"
     gene            complement(1578..2507)
                     /locus_tag="VIS53_08420"
     CDS             complement(1578..2507)
                     /locus_tag="VIS53_08420"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEY5767845.1"
                     /translation="MTTRWTRKDLLGLRELTADEINFVLETTDAFKQVGTREIKKVPA
                     LRGKTLVNFFVEPSTRTRTSFELAAFRLSADVINISATTSSLTKGETLKDTARNLEAL
                     QSDIIVLRHSSAGAPQFLASRLKASVINAGDGAHEHPTQALLDLYTIRERRGKIAGLH
                     VAIIGDILFSRVARSNIFGLLKLGARVTLVGPSTLVPREFEKLGAEVSHNIEDVLPTA
                     DVVNLLRIQHERQRREYFPGLGEYIRLFGLTKERAKLLKPDCLIMHPGPINRGVEIDS
                     EVADGLQSVILDQVTNGLAVRMAVLYLCGGIAT"
     gene            complement(2683..3240)
                     /gene="pyrR"
                     /locus_tag="VIS53_08425"
     CDS             complement(2683..3240)
                     /gene="pyrR"
                     /locus_tag="VIS53_08425"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEY5767846.1"
                     /translation="MKPKQNPTAGVPIMDAEAIRKALRRIAHEIIEGNPNLESVMLAG
                     IPSRGIEIARRIAAFIREIEKADVDTGVIDVAMHRDDVGTRKELPVVHASKLPVPLED
                     RTVIIVDDVLYTGRTVRAAMDAINSFGRPARIQLAVLVDRGHRELPIRPDYIGKNLPT
                     ATREQIQVRLQETDNKADAVWLERE"
     gene            complement(3283..3528)
                     /locus_tag="VIS53_08430"
     CDS             complement(3283..3528)
                     /locus_tag="VIS53_08430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767847.1"
                     /translation="MKVEPDMSPSEADQVQFVKESALYKEFLAERAEILKHKWIESEK
                     AGKDIGFERALLDWIVKHRSNWRERRRKEARTEQAAS"
     gene            complement(3654..4694)
                     /locus_tag="VIS53_08435"
     CDS             complement(3654..4694)
                     /locus_tag="VIS53_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEY5767848.1"
                     /translation="MSISEEQVKNALKAVKYPGFTRDIISFGLVKSIQIDNGDVKVQL
                     ALATNDPNVPATIKNDAERALSTIEGIRSAKVLIDIHAPPGGAGTGTVTARIPGVRHV
                     IAVASGKGGVGKSTVAANLAVALEQTGARVGLCDCDIYGPSISLMFGTRERPTATDEN
                     MIVPIEQYGLRLMSMGFLLDDTSPAILRGPMVTRYTQQFLRQVEWGELDYLVLDLPPG
                     TGDIQLTIVQTVALSGAIIVTTPQEVALIDARKAATMFEKVNVPVIGLIENMSYFLSP
                     SDKKRYDIFGSGGGEREAKRLRVPLLGQVPIDIATREGGDRGIPIVSEDPQSPVTAEF
                     KRIAEEIRKTLP"
     gene            complement(4914..>5330)
                     /locus_tag="VIS53_08440"
     CDS             complement(4914..>5330)
                     /locus_tag="VIS53_08440"
                     /inference="COORDINATES: protein motif:HMM:NF020279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly factor Coa1 family
                     protein"
                     /protein_id="HEY5767849.1"
                     /translation="PNWWKRNWKWFVPLGCFSVALLFLAFIGSILLIVFSAMKSTDVY
                     REALARAKADPAVIEALGSPIKDGFLVSGNTNVNGASGESNLAIPISGPKGKGTIYVS
                     ATKSLGRWNYSGLVVEVGHTHERIDLLQKSAPSNSP"
BASE COUNT         1110 a         1570 c         1442 g         1208 t
ORIGIN      
        1 cattgctcat ctggagagtt acatccatgg cggtttcgcc gcgggataat tcgacaaatc
       61 ttgtagggcg tctgtgtcag acgccaatct caccgcggag tttcacagaa acgccctaca
      121 gtttccaaac cgtttttcct tcaacaatcg tccgcagcgc gcggcctttt agtttccagc
      181 cgtcgaatgg cgaattgcgc gacgctgagt gaaattgatc aaccttcacg gtccactcca
      241 gttccgggtc aattagcgtc acatcagccc gcgcgccgat cgacagtgtg ccggcatcga
      301 gcttaagcag ccgcgacggc tcgactgtgt acatccgaat caatcgagcg acgtcgatcg
      361 tgcgatgttt atgcacgagc aggttcaaaa atagcccgag ctctgtctct aacccaatga
      421 tgccaaacgg cgcggcatcg aactcgacct ccttttcgaa attggcatgc ggtgcgtgat
      481 cggaacacaa gatcgatagc gttccatccg cgattcctgc cagcagcgca tcaacgtggt
      541 tctgcgagcg cagcggcgga ttcgttttgt agttcgtgtc gaaattttgg atcgcgtcgt
      601 cggttaacgc gatgtggtgc ggacaaacct cgccgctgac cttcacgccc cgcgcccgag
      661 cttcacgaag caaccgcaca ctacctgcag tcgagatgtg ctggcaatga atgtgatgat
      721 cgcaaagttc cgcgagcaaa atgttccgca tcactatcgc ttcttcgccg gccgcgggcc
      781 agccgggcag gccaagcagc gtgctccaat aaccctcatg cacaactccg ttgccgacca
      841 aattgtaatc ctgacaatgg tcgagcacag gcacgccaac catccgcgca tactcgacgg
      901 cgcgtcgcat cagttcgtga ttttgaatgc aatgaccgtc atccgttatc gccacgacac
      961 ctgcctgtgc aagtgagccg atcggcgcga gttcttcgcc cgcgagattt tttgaaatcg
     1021 cgccagttgg caaaacattt acgcgcgaga cgctggaagc gcgatcattg atccacgcaa
     1081 tcgtgcccgg attgtccgga acaggcgcag tattcggcat gcaaacaata gtagtgaatc
     1141 cgccggccgc cgcggcgcgc gcgccagact cgatagtttc cttgtggctg aatcccggct
     1201 cgcgcagatg cacgtgcatg tcgactaaac caggcgcgac gatcaaccca agcgcgtcaa
     1261 cctcttcaat ttcggattta ggacttcgaa tttccgattt ggacgcgacg atttttccat
     1321 cagcgatgta aagatcggca atttcgtccc gcttgttcgc gggatcgatc acgcgcccgt
     1381 tccggatgat tatggcgttc atgtccgggc agcgcacgcg ccccgcgtgt tggtttcggc
     1441 gtcgcgccga aacaggcttt ttccaagcat cgccacgtcc tgtgattcgg agttccaaga
     1501 aaagtccgcg atcgcgagga cgcgctcgcc agcacgcgcg acgcgtgcgc tacccagacg
     1561 tgcatttgcc agcgttctca cgtggcaatc cctccgcaca gatagagaac agccatgcgc
     1621 acggcgagac cgttggtgac ttgatcgaga atgacgcttt gcagtccgtc ggcgacttcg
     1681 ctgtcgatct cgaccccgcg gttgatcggt ccgggatgca tgatcagaca gtcgggcttc
     1741 aaaagtttcg cgcgttcttt cgttaggcca aacaagcgga tgtattcgcc gaggcccgga
     1801 aaatattctc tacgctgccg ctcgtgctgg atccgtaaaa gattcacgac atccgcggtc
     1861 gggaggacgt cctcgatgtt gtgcgaaacc tcagcgccca gcttttcgaa ctcgcgcggc
     1921 acgagtgtgc ttgggccgac gagcgtcacc cgcgcaccga gcttgagtag accgaaaatg
     1981 ttcgagcgtg cgacgcgact aaacaaaatg tcgcctatga tcgcgacgtg cagcccggcg
     2041 attttacctc tgcgctcgcg aatcgtgtaa aggtcgagaa gcgcctgtgt cgggtgttcg
     2101 tgcgcgccgt cgcctgcgtt gattacgctt gctttcagtc tgcttgccag aaactgtggt
     2161 gcgcctgcgg aactgtggcg cagcacgata atatcggatt gcaacgcctc gagattccgc
     2221 gccgtgtcct tgagcgtttc gcctttggtc aagcttgaag tcgttgccga gatattgatc
     2281 acatcagcgc tcaagcgaaa tgcagccagc tcgaaagagg tgcgtgtgcg cgtgctcggt
     2341 tcgacaaaaa agttgaccag cgttttgccg cgcaatgcag gcactttttt gatctcgcgt
     2401 gtgccgacct gcttgaacgc gtccgttgtc tcgagaacga aattgatttc gtcggccgtc
     2461 aactcgcgca ggccaaggag atctttgcgt gtccagcgcg tagtcatcgg ttctgggtag
     2521 cgcacgcgtc tcgcgtgctg gcgggtgcgt cctcgcgacc gcgaactttt gtttgacctt
     2581 cacgacaggc aactaggcga tggacaagga aagaccgttt cggcgcgacg ccgcaaccaa
     2641 cacgcgagac gcgtgcgcta cccggaaaac ttgctttcat attcattctc tttccagcca
     2701 tactgcgtcc gctttattat cggtttcttg caggcgcacc tgaatttgtt cgcgcgtcgc
     2761 tgtcggcaaa ttcttgccga tgtaatcggg acgaattggc agctcgcgat ggccgcgatc
     2821 gaccagtaca gcaagctgaa tacgcgcggg acggccaaat gaattgattg catccatcgc
     2881 cgcacgcacg gtgcgaccgg tataaaggac gtcatcgaca atgatcaccg tccggtcctc
     2941 gagcggtacc ggaagtttcg acgcatgcac cacgggcaat tccttgcgcg tgccgacgtc
     3001 atcacgatgc atcgcgacat cgatgacgcc ggtatcgaca tcagctttct cgatctcgcg
     3061 aatgaaagcc gcgattcggc gcgcgatctc gataccgcgc gacggaatcc ctgcgagcat
     3121 tacactttcg aggttcgggt ttccctcgat gatctcatgc gcaatccggc gcagtgcctt
     3181 acgaattgct tccgcgtcca tgatcgggac gccggcggtt ggattctgtt ttggtttcac
     3241 ggtccttggc gacctcgcgg gatcgcctta aaggtacaaa aattaggagg cggcctgttc
     3301 ggtgcgcgcc tcctttcgtc gtcgctctcg ccagttggag cgatgtttca cgatccaatc
     3361 cagcagagct ctttcaaagc cgatgtcttt cccggccttt tcgctctcga tccacttgtg
     3421 cttcaaaatt tctgcgcgct ccgcgaggaa ttccttgtag agcgccgact ctttgacgaa
     3481 ctgcacctga tctgcttccg aaggggacat gtccggttct actttcataa gatctccacc
     3541 tagtcaactc cgaatggcct ggtagccgca ataatatcaa caccggaatt ggacgagtga
     3601 atcgcagaat ttatttagac ctctatttcc ggcgggcgtc gcgggtgcct tgttcagggc
     3661 agcgttttgc gaatttcttc ggcaatccgc ttaaattcgg cagtgacggg ggattgcgga
     3721 tcctcgctaa cgattgggat cccgcgatcg ccaccctcgc gcgtagcgat gtcgatcgga
     3781 acctgcccga gcaatggaac acgcaaccgc ttggcttccc gttcgccgcc gcctgagccg
     3841 aaaatatcat aacgtttctt atccgacggc gagaggaagt aactcatgtt ctcgatcagg
     3901 ccgattaccg gcacgttcac cttttcgaac atggttgctg ccttgcgcgc gtcgatcaaa
     3961 gctacttcct gcggcgtcgt tacgatgatc gctcccgaca acgcgacggt ctgcacgatg
     4021 gttaactgga tgtcgcccgt gccgggcgga agatcgagca ccagataatc cagttcgccc
     4081 cattcgacct gccgcagaaa ttgttgcgtg taacgcgtca ccattggtcc gcgcaaaata
     4141 gccggcgaag tgtcgtccag cagaaatccc atcgacatca gccgcaaccc gtattgctcg
     4201 atggggacga tcatattctc atccgtcgcc gtgggccgct cgcgcgtgcc aaacattagc
     4261 gaaatgctcg gaccataaat gtcgcaatca cacagaccga cgcgtgcgcc cgtttgctcc
     4321 agcgcaactg caagatttgc cgcgactgtt gatttgccta cgccgccttt accgcttgcc
     4381 accgcgatta cgtgtctgac gcccggaatc cgcgccgtga ccgtgcccgt ccctgcgccg
     4441 ccaggaggcg catggatatc gatcaaaact ttggcgctgc gaatgccttc gatcgtgctc
     4501 aaggcgcgtt ccgcatcatt tttgattgtg gccgggacgt ttggatcatt cgtcgcgagc
     4561 gcgagttgca ctttaacgtc gccattatcg atctggatcg acttcaccaa tccgaatgaa
     4621 atgatgtcac gagtgaagcc gggatatttc accgccttca acgcgttctt tacttgctcc
     4681 tcagagatcg acatcttcca aggtaaccgg acagcgtcag acgtaaaccg ttgccaaggt
     4741 ggatcgtctt gtcctcaaga cgatggaatc gccgaaggcc aactttccaa agctctgtta
     4801 gtgcagaaaa ttccaggccg cagagcggca gtttccaacg cgttgagccg ccttcgccaa
     4861 ggctacggcg ggccaaggga caacgcgttc cacctgccta ccggtcctgg taatcaaggt
     4921 gaattggacg gcgccgactt ttgaagaaga tcgatgcgtt catgcgtgtg tccgacttca
     4981 acgacgaggc cggaataatt ccaacgcccg agtgatttgg ttgcggacac gtaaattgtc
     5041 ccttttccct tgggaccgga gatgggaatc gccaggttgg attcaccaga cgcgccgttc
     5101 acgtttgtgt ttcccgacac gagaaatccg tccttgatag gcgaaccgag agcttcaatc
     5161 accgcgggat ccgccttggc gcgggccaat gcctccctat aaacatcggt cgatttcatc
     5221 gcgctgaaga cgatcaatag gattgatcca atgaacgcga gaaacagcag cgccacactg
     5281 aaacagccca gcggcacgaa ccatttccag tttcgcttcc accagtttgg
//
LOCUS       DATDAJ010000341         2593 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1939247, whole genome shotgun sequence.
ACCESSION   DATDAJ010000341 DATDAJ010000000
VERSION     DATDAJ010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1939247"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1775
                     /locus_tag="VIS53_08445"
     CDS             <1..1775
                     /locus_tag="VIS53_08445"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5767850.1"
                     /translation="QRITRQTQLNASASPLPDIAPAAPESDAWSEPGPEALAPQPSET
                     VSGRSWDTAKGATKNLRDKVAELQAALDKTRGDLETARKEKEVVDTRLNETNSKLERT
                     RNDLDEAKNSERQTRDQLVQLQESKPSQGLEGNSDKEQQQLRAEVAQLKGAVAAADQA
                     RVTAENQRDHTQAKFAEANNHIIALERERDDAFSQLKSAKESEQRFQSLVADKNDLQQ
                     KLATAEEKVRKLSEGDPKSTEKLAEMERQMAQLQQQLTETQNRNHYLAARAAELDVEL
                     EHAGTELQAAKLAGAKSEDSSQLARENELLRNIVVRERQEEARRDEAWKLVLAELDRL
                     KVRSDLLNKQIGFLAQPVTKLTAEELALFRQPVVSISNEKAGVFKMSFVFEKKSTAAS
                     GKSNATATAAPEALPNELQEVAVAARKNVEQGNYRTAEKQYQTVLAKDPKNLHALSNL
                     GVVYFRTGKIQSAESTLKKALAIAPNDDFVLTTLGIVHYRQSRFDDALKELKKAIELN
                     PNSATAHNYLGITASQKGRQQEAEKEMLQAIAEDPNYADAHFNLAVILITTQPSSREL
                     AKEHYARATALGTQPSPSLERLLQ"
     gene            1838..2545
                     /locus_tag="VIS53_08450"
     CDS             1838..2545
                     /locus_tag="VIS53_08450"
                     /inference="COORDINATES: protein motif:HMM:NF021371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2071 domain-containing protein"
                     /protein_id="HEY5767851.1"
                     /translation="MQPFLTANWRYLAMLNYVVDPRLITPLVPAETEIDFENGETFLS
                     VVGFLFLDTRLLGLPIPLHRDFEEVNLRFYVRRKSADTWRRGVVFIRELVPRRAIAVV
                     ARRFYGENYLAVPMKHEIEHVDKNLKVEYSWRRGRKWESLKMNAAGEPQAISAGSHAE
                     FITEHYWGYTALREGCSEYRVEHPPWKIWNATGFEFKADVATLCGEQFAEVLSQPPRS
                     AFIADGSPITVQKRQML"
BASE COUNT          701 a          684 c          720 g          488 t
ORIGIN      
        1 agcagcgaat cacaaggcaa acccaactca acgccagcgc cagtccgttg cccgatattg
       61 cgcccgcagc gcctgagagt gacgcctggt ctgagcctgg tcccgaagcg ttggcgcccc
      121 aacccagcga gaccgtgagc ggacggtcgt gggataccgc aaaaggcgcg acaaagaact
      181 tgcgtgacaa agtcgctgag ctacaagcgg cgctagacaa gacgcgcggg gatctggaga
      241 cggcgcgaaa agaaaaagaa gtagtcgata ctcgtttgaa cgagacaaat tccaaactgg
      301 agcgaacccg gaacgatctc gatgaggcaa agaattcaga acgtcagacg cgcgaccagc
      361 tcgtgcagct tcaggaatca aagccttcgc agggattgga aggtaacagt gacaaggaac
      421 agcagcagtt acgcgccgaa gttgcacaat taaaaggagc cgttgccgca gccgatcaag
      481 cgcgtgtgac tgcggaaaac caaagggacc atactcaggc aaagttcgcc gaggcaaaca
      541 atcatatcat tgcgctcgag cgggaacgcg atgacgcgtt ctcccaactg aaatcggcga
      601 aggaatcaga acagcgtttt cagtcgctcg tcgccgataa gaatgatttg caacagaagc
      661 ttgcaaccgc ggaggagaaa gtcaggaaac tcagtgaggg cgatccgaaa agcaccgaga
      721 aattggccga gatggagcga caaatggcgc agcttcaaca gcagctaact gaaacccaga
      781 atagaaacca ctatctggcg gcccgggccg cggagctcga tgttgagctg gaacacgcgg
      841 gcacagaact tcaagccgcc aagctggcag gagcaaagag cgaggattca tcccagcttg
      901 cgagagagaa cgaactgctg agaaatatag ttgttcgtga acgccaggaa gaagcgcgac
      961 gcgatgaggc gtggaagctg gtgctggcgg agttggacag actcaaagtg cgatcagact
     1021 tgctgaacaa acagatcgga ttccttgccc aacccgtaac gaagttaacc gccgaagagc
     1081 tcgctttgtt caggcaaccc gtagtctcaa tctcgaacga gaaggccggt gtattcaaaa
     1141 tgagttttgt tttcgaaaag aaatcgacgg cagcctccgg caaatcgaat gcgacggcaa
     1201 cagccgcccc tgaggctttg ccaaacgaac ttcaggaggt tgcggtcgcc gcccggaaga
     1261 acgttgagca gggcaattat cgaacagcgg aaaagcagta tcagacagtc ctggcgaaag
     1321 atcccaaaaa cctccacgcg ctatccaatc ttggcgtggt ttactttcgc accggcaaga
     1381 tccaatccgc ggaatcaacg ctcaagaaag ccctggccat tgcgccgaat gacgattttg
     1441 tgctcactac gctcggcatt gttcattatc gccagtcgag gttcgacgat gcgctgaaag
     1501 aattaaaaaa agcaatcgag ctgaatccaa acagtgccac cgcgcacaat tatctcggta
     1561 ttactgccag ccaaaaaggc cgacagcagg aggcagaaaa ggagatgctt caagccatcg
     1621 cggaagatcc gaattacgca gacgcgcatt ttaatctcgc ggtgattctc atcacgacgc
     1681 agccttcatc aagggaactt gccaaggaac attacgcgcg cgcgacagcg ctcggcacgc
     1741 aacccagtcc atctttggaa agactgctgc agtgatcgga agatcgaact gcaattgatg
     1801 cttgtagcgg cgatctctga tcgtcgcacc gcaaagcgtg caaccatttc tcacggccaa
     1861 ctggcgttat ttggcgatgc tgaattatgt ggtcgatcct cggctgatca cgccgttggt
     1921 tccggccgaa accgaaatcg atttcgaaaa cggtgagact ttccttagcg tcgttgggtt
     1981 tctgtttctc gacacgcgcc tcctcggtct tccgattccg ctgcaccgcg acttcgaaga
     2041 agtaaatttg cgcttctacg tccggcgaaa atcggcggac acatggcggc gtggcgtggt
     2101 tttcatccgg gaacttgtgc cgcgtcgcgc aatcgctgtc gtagcccgga ggttttacgg
     2161 agaaaattat cttgccgtcc cgatgaaaca cgaaatcgaa cacgtcgata aaaatctgaa
     2221 agtggaatac tcgtggcgac gcggtcgcaa gtgggaatcg ctgaaaatga atgcggccgg
     2281 cgagccgcaa gcaatttcgg caggatcgca cgctgaattt atcaccgaac actattgggg
     2341 ttacaccgcc ttgcgcgaag gctgcagcga atatcgtgtg gaacatccgc cttggaagat
     2401 ttggaacgct accggctttg aattcaaggc cgatgttgca actctctgcg gcgagcaatt
     2461 cgccgaagtg ttaagtcagc cgccacgctc cgcgttcatt gccgacggct caccgataac
     2521 cgttcagaaa cgtcagatgc tgtagggcgt ttgtctcaga cgccaagaaa tggctattgc
     2581 ttcgtcagca act
//
LOCUS       DATDAJ010000342         5634 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1943246, whole genome shotgun sequence.
ACCESSION   DATDAJ010000342 DATDAJ010000000
VERSION     DATDAJ010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5634
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943246"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VIS53_08455"
     CDS             complement(<1..283)
                     /locus_tag="VIS53_08455"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767852.1"
                     /translation="MAGLFAKKSLERLMTEAQDVGEHSLKRSLGPINLVMLGIGAIIG
                     AGLFVRTAAAIADRAGPSVVLAFVVAGIGCAFAGLCYAEFASMIPVAGSA"
     gene            complement(303..1850)
                     /locus_tag="VIS53_08460"
     CDS             complement(303..1850)
                     /locus_tag="VIS53_08460"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5767853.1"
                     /translation="MTTAVTEAPASNQKFVRGLGLLDSTMLVAGSMIGSGIFIVSADI
                     ARLVGSAGWLLVVWAVTGVLTIVAALSYGELAAMMPRAGGQYVYLREAYSPLWGFLYG
                     WTLFLVIQTGTIAAVAVAFARFLGVLTDLVSPTQWIVSPITISQRYALSLSTQQLVAI
                     LIIVLLTFVNTRGLELGKLIQNVFTSAKTLSLMALIALGIFVGRNANALHANFTNFWT
                     PTGVSPVTSDLPFVGAVSAAGGALGMLIAVCVGQVGSLFSSDAWNNITFTAGEVREPR
                     RNIPLSLLFGTALVITLYLLANVAYLCVLPLEKIQHAPDDRVGTAAMEVMFGGAGAGI
                     MAVAIMVSTFGCCNGLILAGARVYYAMAQDGLFFKATARLNSKHVPATALVMQGIWTA
                     VLVLPRTRNVDATSGAVSYGNLYSNLLDYIIFAALIFYVLTIAGIFVLRRTRPDAERP
                     YRALGYPILPALYMVGATAIMLVLLAYRAQTTWPGLVIVLTGVPIYFLWKKTNQFRSG
                     TGQPPAS"
     gene            1967..2938
                     /locus_tag="VIS53_08465"
     CDS             1967..2938
                     /locus_tag="VIS53_08465"
                     /inference="COORDINATES: protein motif:HMM:NF025341.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartyl protease family protein"
                     /protein_id="HEY5767854.1"
                     /translation="MTSNHLLRAPRLLWVCGAALGLTIELAATSLGASARTAPQFEAL
                     PLVRSRQNHLLLRAFINGKPAWLTVDSGAPVSAIALNRREHFRLKPITAESSLPARVQ
                     INGAFNNVAIARELRIGGLTLVDEPVVTVDLGGSARAARMAREPQIDGIIGADILFPT
                     QAVLDCEKQLLILKTDPNVLGSFPGFSRRGLRAVPIQVSDGYNLYVNGSVNGQAAKLM
                     VDTGSFTTLLHRSFVRRMRIATRETPYSSSAVNLKERGVRVANIRKLTVGSVNIRGKD
                     VGVIDLEGLIHDGLLEGSPPVAGLLGAETLRRHHGIIDFGTRTLYLR"
     gene            3034..3981
                     /locus_tag="VIS53_08470"
     CDS             3034..3981
                     /locus_tag="VIS53_08470"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NDP-sugar synthase"
                     /protein_id="HEY5767855.1"
                     /translation="MNEITQAFVLAAGLGTRLRPLTDELPKPLIPIFQKPLVTFALDH
                     LIGVGVNKFVINTHRLPELFQNFFAAREYAGFPTTLIHEPDLLETGGGIKNAESHFGN
                     EPFLTYSGDILTDVELQPLIDEHFGRRNDVTLALRHTGLATAVALRDRCVVDISNRYG
                     VAGNFDFANIAVWNPSIFERIPPHKKISFIPIIADWISEGAKIGGVVMNDGKWFNIGS
                     RKEYFDVHRMISNEHWRPAYVKTGDWAEAVAKSAHVDPTAQVRGCSVVGSNCRVGADA
                     ILEDTILWPDAEIASQSHLEACIVRSRKKVTGIHRDIDI"
     gene            3986..4975
                     /locus_tag="VIS53_08475"
     CDS             3986..4975
                     /locus_tag="VIS53_08475"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEY5767856.1"
                     /translation="MRTDLLVRRTRKHFPRLDVGEIKIAPIQKGGSDRKFYRIRCSPE
                     QALILVKYNLEREENRHYVTIANFLTEHRIRVPEIYFHDADEGLIWLEDLGERDLYSY
                     RDETWLVRRAFYESALDQIAALHALPESVCIEIKQHLPAEFNSELYLWEQNYFFENCL
                     GRLFKTEKEKLAQLASLPALQEIADRLASFPRVLVHRDFQSQNIIIRNSQAHLIDFQG
                     MRPGLAEYDLASLLYDPYVDLPESEHAELTAHYRGRQLENGIATNGDFDLKLRLCAMQ
                     RLMQALGAYGFLGLVKGHKHFLKHVAVAMQSLQRTVAEIDGLNELEKTLRQLT"
     gene            complement(4987..>5634)
                     /locus_tag="VIS53_08480"
     CDS             complement(4987..>5634)
                     /locus_tag="VIS53_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEY5767857.1"
                     /translation="LVERAPPVVPTPTLENPTKPESAVFTLNWLSATGTGILLAAMIA
                     GLVMQFSPAEMLRAYLKTIFRVRFSLLTIAAMLALGYVTRYSGADATLGLALAKTGNL
                     YPFFGTFVGWLGVALTGSDTASNVLFGGLQKITAGQLGISPTLMAAANSSGGVMGKMV
                     DAQSIVVASTATNWYGHEGTILRYVFFHSLALAALVGILVSLQAYVFPFTEIVVK"
BASE COUNT         1307 a         1601 c         1547 g         1179 t
ORIGIN      
        1 aggcgctgcc ggcgactggg atcattgacg caaactcggc gtaacacagg ccggcaaatg
       61 cgcagccgat tcctgcgaca acgaaggcga gcaccacgga aggacccgca cgatcggcga
      121 ttgccgcggc agttcgcaca aacagacccg caccgatgat tgctccaata cccagcatga
      181 ccaggttaat cggcccgagg gaccgtttga ggctatgttc cccgacgtcc tgcgcctctg
      241 tcatgagccg ctccaacgat ttttttgcga ataaacctgc cattgcgttg tattctcctt
      301 cgctagctag cgggcggctg gccggttccg cttcgaaatt gatttgtttt tttccaaaga
      361 aaataaatcg gcacgcccgt cagcacgatc actaaacccg gccacgtggt ttgtgctctg
      421 taggcgagca gaacgagcat gattgccgtg gcgcccacca tgtacagcgc cggtagaatc
      481 ggataaccca atgcgcggta cggacgttcg gcgtctggcc gcgttctacg aagcacgaat
      541 atccccgcga ttgtcagcac ataaaaaatc agagccgcga agataatgta atccaagaga
      601 ttactgtaaa gattgccgta gctcacggct ccgcttgtgg cgtcaacgtt tcgcgtgcga
      661 gggagcacga gcaccgcagt ccagattcct tgcatcacga gagccgtggc aggcacgtgt
      721 ttcgaattga gccgcgctgt cgctttaaag aacaatccat cctgcgccat tgcgtaatac
      781 acacgcgctc ctgccagaat cagtccatta caacacccga atgtagagac cataatggcg
      841 accgccatga tcccagcgcc tgcgccgccg aacattacct ccatcgccgc ggtgccgacg
      901 cgatcatccg gagcgtgctg gattttttcc aacggcagca cacagagata agccacgttc
      961 gccagcagat acaatgtgat gaccaaggca gtgccgaata aaagcgacaa cggaatgttt
     1021 cgccgcggct cgcgcacctc accagcagta aacgtaatgt tattccacgc gtctgaggaa
     1081 aacagcgaac cgacttggcc aacacaaact gcgatcaaca tcccaagcgc gccgccagcc
     1141 gcagagacag caccgacgaa cggcagatcc gatgtaaccg gagaaactcc ggtcggtgtc
     1201 cagaaattcg tgaaattagc atgcagcgcg ttggcgttgc gtcccacgaa aatgcccagc
     1261 gcgatcaacg ccatgagtga caacgtcttc gccgaggtaa aaacattctg gattagctta
     1321 cccaactcca atccgcgcgt atttacgaac gtaaggagaa cgatgatcaa gattgcgacc
     1381 agttgctggg tagaaaggct gagcgcgtac cgttgggaga tcgtgattgg cgagacaatc
     1441 cattgcgtcg gcgacactaa gtcagttagc acgccgagaa atcgcgcgaa tgccactgcg
     1501 actgcggcaa ttgttccggt ctgtatcacg aggaacagcg tccagccata gagaaatccc
     1561 cacagcggac tgtacgcctc gcgcaggtaa acatattggc cgccggcccg cggcatcatt
     1621 gcggcgagct cgccgtagct gagcgcggcg acaatcgtga gcacgcctgt gaccgcccac
     1681 accacaagca gccacccggc agagccaacc agccgcgcaa tatccgccga cacaatgaaa
     1741 attcccgaac cgatcatcga gcccgccacg agcatcgttg agtcgagcag gccaagtccg
     1801 cgaacgaact tctgattgct cgcaggtgcc tcggttactg cagtcgtcat ttgatcggct
     1861 ggacttgccg gaggagttaa tcatcagtca tgcctgcact gcaacggcaa aaagccgcgc
     1921 aaacttgttt acggctaaaa ataagcgtgt aatctccccg ccaccgatga cctcaaatca
     1981 tctgctgcgc gcaccacgct tgctgtgggt ttgcggcgct gcgctgggtt tgaccatcga
     2041 attggctgcc acgtcgcttg gcgcttccgc gcggacagcg ccgcagtttg aagcattacc
     2101 gctcgtccgc tcgcgacaaa atcatttgtt gctgcgtgcc ttcattaacg gaaaacccgc
     2161 ctggttgacg gtcgatagcg gtgcccccgt gagcgcgatt gccctgaatc gccgcgaaca
     2221 ttttcggctc aaaccgatca ccgccgaatc aagtttgccc gctcgcgtcc aaatcaacgg
     2281 cgcattcaac aatgtggcga tcgcgcggga actgcgaatc ggcggactga ctcttgtcga
     2341 tgagccggtg gtcacggtgg atctcggcgg ttccgcgcgc gctgcgcgaa tggcgcgcga
     2401 acctcagatc gacgggatca taggtgcaga catccttttc cccacacaag cggttctgga
     2461 ctgtgaaaag cagctactaa ttctgaagac cgatccaaat gtcctcggga gtttccccgg
     2521 tttcagccgg cgcggtttac gcgctgttcc gattcaggtc agcgatggtt acaacttgta
     2581 tgtaaacgga tcggtgaacg gacaagcggc aaagctcatg gttgatacgg ggtcgttcac
     2641 tacgctattg caccgttcgt tcgtccgaag gatgcgaatt gccactcgtg agacgccata
     2701 tagctcctcg gccgtgaacc tgaaagagcg cggcgtgcgc gtggcgaaca ttcgcaagct
     2761 aaccgttggc tcggtcaata tcaggggcaa ggacgtgggt gtgatagacc ttgaaggact
     2821 cattcacgac ggattgttgg aaggatcgcc gccggtcgcc gggttgctcg gtgcagaaac
     2881 gctgcgacgg caccatggca tcatcgactt cggcacgcgg acgctttacc tgcggtagca
     2941 agcgtaccta gcctgtctgt accattgtga atgaagtcgc ctgccgggcc gtagctttag
     3001 cgtaggcggg aagaacctct cgattttctg ctcgtgaacg aaatcactca ggcattcgtt
     3061 ttggcagcgg gtcttggcac gcgcttgcgt ccattgaccg atgagctccc caagccgctc
     3121 atcccgatct ttcaaaaacc gctcgttact ttcgcgctcg atcatttgat aggcgtcgga
     3181 gtgaacaaat tcgtcatcaa cacgcaccgg cttccggaat tattccaaaa tttctttgcg
     3241 gcgcgcgagt atgctggctt tcccactacg ctcattcacg aaccggatct gctcgaaacg
     3301 ggcggcggca tcaagaacgc agaaagtcat ttcggcaacg aaccgttcct gacctacagc
     3361 ggcgatattt taaccgacgt cgaactgcaa cctttgatcg atgaacattt tggccggaga
     3421 aacgatgtga ccctcgcttt gcgtcacacc ggcttggcta ccgctgtcgc tttgcgcgat
     3481 cgctgtgtcg tggacatcag caaccgctac ggcgtcgcag gaaattttga ttttgccaat
     3541 atcgccgttt ggaacccgtc gattttcgag cggattccgc cgcacaaaaa aatctcgttt
     3601 attccgatca ttgcggattg gataagcgag ggagcaaaaa tcggcggcgt ggtcatgaac
     3661 gacggaaaat ggttcaacat agggtcgcgc aaggagtatt tcgatgtcca ccggatgatt
     3721 tcgaacgaac attggcgacc ggcctacgtg aaaacgggcg attgggccga ggcggtcgcg
     3781 aaaagcgccc atgtcgatcc gaccgcgcaa gttcgcgggt gttctgtggt tgggtcgaac
     3841 tgccgcgtcg gagcggatgc gattctggaa gacacaattt tgtggccgga tgcagaaatt
     3901 gcttcccaaa gtcacttgga ggcttgtatt gtccgctccc gaaaaaaggt cactggcatc
     3961 catcgcgaca tcgacatctg aatttatgag aacggacctg cttgttcgac gaacgcggaa
     4021 gcactttccg cggttggatg ttggggagat aaaaatcgca cccattcaaa agggtgggtc
     4081 ggaccgcaaa ttctatcgga tccgttgctc gccggagcag gcgctcattt tagtgaaata
     4141 caatctggag cgggaagaaa atcgccatta cgtgacgatc gcgaattttc ttaccgagca
     4201 ccgaattcgt gtgccggaga tttactttca cgacgctgac gaaggtttga tctggctgga
     4261 agaccttggc gagcgcgacc tctacagtta tcgcgacgaa acctggctgg tgcgccgcgc
     4321 gttctacgaa tccgccctcg atcaaatcgc cgcgctgcac gccttgcccg aatcggtttg
     4381 catcgagata aagcagcatt tgccggccga gttcaattct gagctttacc tgtgggaaca
     4441 gaattatttt ttcgaaaatt gcctcggccg tttattcaaa accgagaaag aaaagctcgc
     4501 gcagctggcg tccctgcctg cgctgcagga aatcgcagat cgcctggcat cgtttccgag
     4561 agtcttggtg caccgcgatt ttcaatcgca gaacatcatc atccgaaaca gtcaggcgca
     4621 cctgatcgat ttccagggaa tgcgacccgg tcttgccgaa tacgatctcg cctcgctcct
     4681 ttatgaccct tatgtcgatc ttccggaaag cgagcacgcg gagttgacgg cacattatcg
     4741 cgggcgtcag ctcgaaaacg gtatcgcgac caacggcgat ttcgatctca agttacggct
     4801 ctgcgccatg caacgtctga tgcaagcgtt aggtgcttac ggatttctcg gcttggtcaa
     4861 gggtcacaaa catttcctca agcacgtcgc tgtcgcgatg cagtcgttgc agcgtaccgt
     4921 agcggaaatc gacgggctga acgagctgga gaaaacgttg cggcaactga cgtaaccagc
     4981 tgggaattat ttcaccacaa tttcggtgaa cggaaacaca taggcctgca gcgaaaccaa
     5041 aattcccacc agcgccgcca gcgcgaggct gtgaaagaac acgtaacgca aaatggttcc
     5101 ttcgtggcca taccaattgg ttgctgtgct ggcgacgacg atactttggg catccaccat
     5161 tttccccatc acgccgcctg agctgtttgc cgcagccatc agcgtcgggc taatgccgag
     5221 ttggccggcg gtgatttttt gtaatccgcc gaagaggacg ttagacgccg tgtctgagcc
     5281 ggtgagcgcc acgcccagcc agccaacaaa agtgccaaag aacggataaa gatttcccgt
     5341 tttcgccagt gccaacccta gtgtcgcgtc cgcacccgag tagcgtgtca cgtaaccgag
     5401 ggcgagcatc gcggcgattg tcagcagcga aaaccggacg cggaaaatcg ttttcagata
     5461 tgcgcgcagc atttcggccg gcgaaaattg catcaccagt ccggcgatca ttgcggcaag
     5521 cagaattcca gtgccggtgg ccgagagcca attcagcgtg aacacagcgc tctccggctt
     5581 ggttggattt tccaaggttg gtgtcggaac caccggcggc gcgcgctcga cgag
//
LOCUS       DATDAJ010000343         2839 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1945106, whole genome shotgun sequence.
ACCESSION   DATDAJ010000343 DATDAJ010000000
VERSION     DATDAJ010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1945106"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..567
                     /locus_tag="VIS53_08485"
     CDS             250..567
                     /locus_tag="VIS53_08485"
                     /inference="COORDINATES: protein motif:HMM:NF015603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM14 family protein"
                     /protein_id="HEY5767858.1"
                     /translation="MEAAKIYFIIFGLLTIVGGIIGYVKAGSTASIIAGAITGVLLLV
                     AAFLLPEHRVAGLATALIISVLLAGQFVPKFFHTGRIMPAGMMSVLSVIGIIAAIVVW
                     VRK"
     gene            572..2002
                     /locus_tag="VIS53_08490"
     CDS             572..2002
                     /locus_tag="VIS53_08490"
                     /inference="COORDINATES: protein motif:HMM:NF018983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016977 - chitosanase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 75 protein"
                     /protein_id="HEY5767859.1"
                     /translation="MGKIRLRTWRRLVLVLFAAIFAAIVYRWISLERLQRFAPIEVSE
                     TPTPAPTATRSPVITGKLDTAKLFNGITFHSTVETAPGADAATERIQPESYVLDLKLL
                     AHVPSPNKTIEELAKVSPQLPTLLPGLASMLSAESVSPLFAQLYDTKVRMLRENLGRL
                     DLLLSRHNFFDCQTVLQLQHPQTHRKALLLQAEMDVDADGSDSDRLPAGTGAPANFKP
                     ATSYRWDKKTDAPNPYLSGTEQRLKSAEDEYVLASTAPARKRELRNAIAELRAEIGTL
                     KKFSFLIGAIDPFIVVPGTFTRGPDPVKVGDYAVVVFGDAIYPVIVGDVGPNNKVGEA
                     SLRIAKELNTLATAYNRPVSDLKVSYIIFPGTAEKPFGPPDLDKIHARCETLVKEIGG
                     ASVPLHRWENIIPSPTPSPTPSPSPSPSGTPSPSSTPPGTPSPAPSPTFAFRVSTPAE
                     TASPGATVAPTRSPAVKPSPVKKRKP"
     gene            2123..2569
                     /locus_tag="VIS53_08495"
     CDS             2123..2569
                     /locus_tag="VIS53_08495"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5767860.1"
                     /translation="MRTHFDHENLDVYQLELRFVTWVTSLLAKIKQCPTSARIAEVSD
                     QLDRASLSALLNTAEGNGRRQRQTRAKFFDDAPGSVTECAGCLDALVAKGICKSEEIG
                     DGKRLLLRIASMLTKLITRFDSSSSSVVREAAREEEFEREDEDENG"
     gene            2562..>2839
                     /locus_tag="VIS53_08500"
     CDS             2562..>2839
                     /locus_tag="VIS53_08500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767861.1"
                     /translation="MDNECLDLMHRLMAYRHEPIHSELMKIRDKYSMLHLDVLILIYH
                     FAKLCSGAILEIGAFVGGATIAAALGVRDSGREKKLIAIEPGGSVKHKR"
BASE COUNT          606 a          796 c          822 g          615 t
ORIGIN      
        1 cgtcacccag cctgcggagt tgcgggttct gcgggagatg tcggaagagg aaatccgtga
       61 atttgcaacc aaccatggct ggcgcgttat ccggcgcctc ggcgggcggc aaatcgaatt
      121 ctacaatgat gcgagcgtgc gcacgccgct gtagtaggat cgcgcgcact ctcccgacgc
      181 gccacaggcg cgtggctaca gtctagctgg acagcggcgt ccagttggct taccaagtgg
      241 cgcgttccaa tggaagcggc aaagatttat ttcattattt ttggcctgct cacgatcgtc
      301 ggtggcatta tcggctacgt taaggccggc agcacggcgt cgattattgc cggggcgatc
      361 acaggggttt tgctgctcgt agcggcattt cttttgcctg aacaccgcgt cgccggatta
      421 gcgactgcgc tgatcatctc ggttttgctg gctgggcagt tcgtgcccaa attctttcat
      481 accggcagga tcatgcctgc tggcatgatg tcagtgctga gcgtgatcgg gattattgca
      541 gcgatcgtcg tctgggtcag aaagtaatcg cgtgggaaaa attcgccttc gtacgtggcg
      601 gcggttggtt ctggttctat tcgccgcgat tttcgccgcg attgtctatc gctggatctc
      661 gcttgagcga ctgcaacgct tcgcgcccat tgaggtatcc gaaacgccga cgccggctcc
      721 gacggcaacc cggtcgccgg tgatcacggg aaagttggac accgcgaaac ttttcaacgg
      781 catcacattt cactccaccg ttgagacggc tccgggcgcc gatgctgcaa ccgaacgtat
      841 ccaacctgag agttacgtac tggatctcaa gctgctggcg catgtacctt caccgaacaa
      901 aacgatcgag gaactggcga aagtcagtcc ccaactgcca acgcttttac ccggtttggc
      961 gtcgatgttg tcagctgaat ccgtttcgcc gctgttcgcg cagctttacg acacgaaagt
     1021 cagaatgctg cgcgagaacc ttggccgtct cgatctgctt ttatcgcggc ataacttttt
     1081 cgattgccag accgttctac agcttcagca tccgcaaacc catcggaaag cgcttctcct
     1141 ccaggccgag atggatgtcg acgccgacgg gtccgattcc gatcggctgc ctgctgggac
     1201 cggtgccccg gcgaatttca agccggcgac cagttatcgt tgggacaaga aaaccgacgc
     1261 gcccaacccg tatctctccg ggactgaaca gcgattgaaa agcgcagaag acgagtacgt
     1321 gctggcaagt accgcgcctg cgcgcaaacg cgagctgcgc aacgcaatcg ctgagttgcg
     1381 cgccgagatt ggcacgctga agaagtttag ttttctgatc ggcgcgatcg atccgttcat
     1441 cgtggtgccg ggcacgttta cccggggccc cgatccggtt aaagtgggcg attacgcggt
     1501 cgtggttttc ggcgatgcca tttaccctgt gatcgtcgga gatgtcggtc ccaacaacaa
     1561 agtcggcgag gcgtcgctgc gcatcgcaaa agaactcaac accctggcaa cagcctacaa
     1621 tcggccggtc agcgatctga aggtgagtta cattattttc ccgggaacgg ctgagaagcc
     1681 atttggtcct cctgacttgg acaaaatcca cgcgcgttgc gaaacgctgg taaaagagat
     1741 cggcggcgcg agtgtgccgt tgcatcgttg ggaaaacata atcccttccc ccactcccag
     1801 cccgactccg agtccttcgc cgtctccgag cgggacgccg tctccttcgt cgactcctcc
     1861 gggaacaccg tctccggcgc cgtcgccgac gttcgcattt cgcgtttcaa ccccggcaga
     1921 gaccgcctcg cccggcgcga cagtcgcccc aacgcgttca cccgcggtta agccaagccc
     1981 agttaaaaag cgaaagccgt gaaacagtgt tgtgattgga aagatcgcct tcgtgctcgt
     2041 cctcgtcgtc gtcctcgcaa cggggcagcg gagagccggc gagattgccg atcaggagaa
     2101 ggaggacgag taggagctta aagtgaggac gcattttgat catgaaaatc tcgatgttta
     2161 tcagctggag cttcgttttg tcacatgggt gacaagccta ctagcaaaga tcaagcaatg
     2221 tccgaccagc gctcgaatcg ctgaagtttc cgatcagctt gaccgcgcca gtctctccgc
     2281 gttgctaaat acagctgaag gcaatgggcg acgccaacgg caaacgcgag cgaagttctt
     2341 cgatgacgca cccggttcgg tcacggaatg cgcaggttgc ttggatgcac tggtcgcaaa
     2401 agggatttgc aaatcagaag agatcgggga tggcaaacgg ctcttgctac ggatcgcttc
     2461 gatgctcacg aagctgatta cgcgtttcga ttcgtcatcc tcgtcagtgg tccgagaagc
     2521 ggcacgggaa gaagaattcg agcgcgagga cgaggacgag aatggataac gaatgcctgg
     2581 atctgatgca caggctgatg gcgtaccgtc acgagccaat tcattcggag ctgatgaaga
     2641 tccgcgacaa atactccatg ctccatctgg acgttctgat tttgatttat catttcgcga
     2701 agctttgctc cggcgccatt ctcgaaatcg gcgcgtttgt tggaggagca acaattgccg
     2761 cggcgttagg cgtccgcgat tcaggtcgcg agaaaaaact gatcgcgatc gagcccggcg
     2821 gtagtgtgaa acataaacg
//
LOCUS       DATDAJ010000344         2273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1946830, whole genome shotgun sequence.
ACCESSION   DATDAJ010000344 DATDAJ010000000
VERSION     DATDAJ010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1946830"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VIS53_08505"
     CDS             complement(<1..332)
                     /locus_tag="VIS53_08505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767862.1"
                     /translation="MTLADGMNASKPKIDIEPGLRKMILIEIIFPMVLLILGIYHGLM
                     QVLYRAGMIRSSQFLGLSYFQGLTLHGVVNAIVFTTFFAVAFGYAIIRYYLRRSLNMK
                     VAWLSFGL"
     gene            complement(439..1221)
                     /locus_tag="VIS53_08510"
     CDS             complement(439..1221)
                     /locus_tag="VIS53_08510"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY5767863.1"
                     /translation="MNKLSATQLEKRIIWVALAFVAVLLALSALAINLFHIGLPTCLT
                     DVKPFQKGELIAHSPTHYELHYVARMWKFEPEDVTIPAGSTVDIYLSAADVTHGLIML
                     GTNLNLMAVPGVVNYARVKFDKPRSYQVLCHEFCGTGHDRMASRFNVVDAATFAAKPS
                     PPAVAEPTHPGYKILDANLCTTCHSLDGQPGIGPTFKGLYGRTEKLRDGASITVNDPF
                     IREKILHPEAKVVAGTFEQEMPKTDLSDEEIEEVIEYLKTVR"
     gene            complement(1218..1445)
                     /locus_tag="VIS53_08515"
     CDS             complement(1218..1445)
                     /locus_tag="VIS53_08515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767864.1"
                     /translation="MSAKTAKLAVLHFSLFSILRIWQDAVLTEFEPMEPGEPENGRRF
                     FPSGAIFFFALLIAFYAALWLVVYWIMVARA"
     gene            complement(1535..>2273)
                     /locus_tag="VIS53_08520"
     CDS             complement(1535..>2273)
                     /locus_tag="VIS53_08520"
                     /inference="COORDINATES: protein motif:HMM:NF021235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5767865.1"
                     /translation="GFTRADGSPLPTTQLAEYRDSVHGRALLVRGDLGAPACNTCHGN
                     HAASPPGVAQVSRSCSLCHSANASLFDGSKHKQAFDQHNWPECGQCHNNHAIAKTHDS
                     MLSTGPGQLCGDCHREYAKATPDCIKTADYFHDTITQLDRARTRFIAVSEKIAARGLD
                     VEPINNQLTELGDALKKSRTYVHSFSRNTFQQVAAPGEEAVKRTDALVNKASEEFKFR
                     QIGLVVSIGFIGLLMLAIYLKLRQMEK"
BASE COUNT          509 a          622 c          615 g          527 t
ORIGIN      
        1 atcaatccaa acgacaacca ggccactttc atgttgagcg accggcggag gtaataacga
       61 atgatcgcgt aaccaaaggc cacggcgaag aaagtggtga acacgatcgc gtttacgaca
      121 ccgtgcagcg ttaagccttg gaaataactc agcccgagaa attgcgagct gcgaatcatt
      181 ccggcgcggt aaagcacctg catcaacccg tgataaattc caaggatcaa cagcaccatc
      241 gggaaaatga tctcgatcag gatcattttc cggagccccg gctcgatatc gatctttggt
      301 ttgctagcat tcataccatc cgcaagtgtc attctgagcg tagcgaagaa tctctgattt
      361 ctttgtgtat ccgaggcaat ggccagagat gtttcgcttc gctcaacatg acagttttat
      421 tccaatatga gtttagcgtt atctaacggt tttgaggtac tcgatgactt cctcgatctc
      481 ctcatcgctg agatccgttt tgggcatttc ctgctcaaat gtgcctgcta ccacttttgc
      541 ttcggggtga aggatttttt cacgaataaa agggtcattc acggtgatgc ttgcgccgtc
      601 cctcaacttt tcggttcgac cgtacaagcc cttgaatgtc ggcccaatgc ctggctgacc
      661 gtcaagtgaa tggcatgttg tgcacagatt tgcatccagg attttgtacc ctggatgcgt
      721 cggctcggct acggccggcg ggctcggctt tgcggcgaat gttgccgcgt ccaccacgtt
      781 aaacctggaa gccatgcggt cgtggccggt gccgcaaaat tcgtggcaga gcacttgata
      841 tgagcggggc ttatcgaatt tgacccgcgc atagttcacc acgccgggca ccgccatcag
      901 attgagattg gtacccagca tgatcagacc atgcgtcacg tcggcggcac tgagataaat
      961 atctaccgtc gatcctgccg gaattgtgac gtcttccggc tcgaatttcc acatccgcgc
     1021 aacgtaatgc agctcgtaat gcgtcggcga atgcgcgatc aattcgcctt tctggaacgg
     1081 tttgacatcg gtgaggcaag tcggcaggcc aatgtgaaac aaattgatcg ccaacgcgga
     1141 cagcgccaaa agcaccgcaa caaacgcgag cgccacccag atgatccgct tctccaattg
     1201 cgtggcgctc agcttgttca tgcccgcgcg accatgatcc agtaaacgac cagccaaagc
     1261 gccgcgtaga acgcaatcag aagcgcaaaa aagaaaatcg cgccgcttgg aaagaaccgc
     1321 ctcccgtttt ctggttcgcc tggctccatc ggttcaaact ctgtcagcac cgcatcctgc
     1381 caaatgcgca aaatcgagaa aagcgaaaaa tggaggacag ccagcttggc tgtcttggcc
     1441 gacacgctgc cagcgtgccg aggatcgagg atgaattggc aagctggcag cttgcccgcc
     1501 gagtcaggct ggcagcctga cttccgatag cgcgttattt ttccatctgc cgaagcttca
     1561 aataaatcgc gagcatcaga agtccgataa agccgatgct cacaacgaga ccaatctgac
     1621 ggaatttaaa ttcttcgctg gctttattta cgagcgcgtc ggtgcgtttg acagcctctt
     1681 cgcccggcgc ggcgacctgc tgaaaggtgt ttcggctgaa cgaatgcaca tatgtgcgcg
     1741 atttcttcaa cgcatcccca agttctgtta gttggttatt gatcggctcc acatccaagc
     1801 ctctggctgc gatcttttcc gaaaccgcga tgaatcgtgt ccgcgcccgg tcgagttgag
     1861 tgatcgtgtc gtgaaaatag tctgcagtct taatgcagtc cggggtggcc ttggcgtatt
     1921 cgcgatggca atcgccgcat aactggccgg gtccggtcga cagcatcgag tcatgcgtct
     1981 tggcaatcgc atgattgtta tggcactggc cacattcggg ccagttatgt tgatcgaacg
     2041 cctgcttgtg tttgctgccg tcaaacagac tggcgttggc cgagtggcaa agactgcagc
     2101 tccggcttac ctgcgcgacg ccgggcgggc tggcagcgtg attgccgtgg caggtgttgc
     2161 atgcgggcgc gccgagatca ccgcgcacga gcaatgctcg tccgtgcacg ctgtctcgat
     2221 attcggcgag ttgcgttgtc gggagtggcg aaccatctgc gcgcgtaaat ccg
//
LOCUS       DATDAJ010000345         3968 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1947149, whole genome shotgun sequence.
ACCESSION   DATDAJ010000345 DATDAJ010000000
VERSION     DATDAJ010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1947149"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..454)
                     /locus_tag="VIS53_08525"
     CDS             complement(<1..454)
                     /locus_tag="VIS53_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767866.1"
                     /translation="MLLRVLLLTGIIAFVSPLLGRTSSPAAAPSLEQRVADLEAYVTN
                     SPRGVDIGSASSSNIAAPGPSYNAWMMTCAALVLFMTLPGLALFYGGLVRAKNVLSVL
                     AQCLGIAGLVTILWWAVGYSLVFSRGCPFVGGLKFAFLHGVDAHPNSDY"
     gene            complement(669..1754)
                     /locus_tag="VIS53_08530"
     CDS             complement(669..1754)
                     /locus_tag="VIS53_08530"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY5767867.1"
                     /translation="MKYVLTITIIALLPIAAFAQTPAAPPQPPRPPHPPGMPGHHESG
                     MPGHHEKGPKVPVTYLGVDTSQVPTVVSDQLGLAKGFGLVVDYVEPNSPAATAGVQQN
                     DILKMLNDQILIEPSQLRKLLQTFSDGTEVTLTVLRKGQEQKLTAKLARKEVSQRHSA
                     FPGGNHDWHWDFDAKGELSDQMQELKEQLKEQLGDQRGIIRDAVTQAHEAARRARDDA
                     RRAADQLRIFFEDDGAVKASKIDLRKAQIVFSDDKGELKLANVDGRKLLTVKDPQGKL
                     LFSGPVETKEDLDKMPADVRERYDRLQQNDLPTVTPRSDTDNADEADMDDADDQDDDD
                     DEETGEVSQQVSFRSSPGEMIPQTISF"
     gene            complement(1776..2309)
                     /locus_tag="VIS53_08535"
     CDS             complement(1776..2309)
                     /locus_tag="VIS53_08535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767868.1"
                     /translation="MNDFSELEKELKKLRPAQPSPVLFERVGEALKNCRASVSDAKCK
                     RWRFTETPYNWWSLGFGVAAAAVLILFAAVTMERRHEQQQTVARSSPASETRPAPLEM
                     ERSRSPSRFVPAGGMNLVYNARDEGLHFANGSERPVRRVRYNTQQTWRWRNPETGASL
                     RVSYPSEEVVLIPVSGQ"
     gene            complement(2306..2863)
                     /locus_tag="VIS53_08540"
     CDS             complement(2306..2863)
                     /locus_tag="VIS53_08540"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767869.1"
                     /translation="MFTLVDKIGTWRRLESKDREKVMEPIASHENWRNCFSEVAPGLL
                     LFARQWVQSAADAEDIVQDAFVKFWRRNHDIDNRGLLYAAVRSLALDFIRRDARRARR
                     EATVLAETEPVIEPHFQLEDDTQSALAAAVESLPRDQREVLVLKIWNDFTFSEIGSAL
                     GISQNTAASRYRYALTNLKKTLQPQ"
     gene            3139..>3968
                     /locus_tag="VIS53_08545"
     CDS             3139..>3968
                     /locus_tag="VIS53_08545"
                     /inference="COORDINATES: protein motif:HMM:NF014237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase"
                     /protein_id="HEY5767870.1"
                     /translation="MKCVTSLLLIVAVGILTPNAASIIPDSSVHATHVEFVPPAPGKL
                     YHGFYWGGVGTDKHDPTEHDLTPADVARYEQAVGKQTAWIYFSDNWFESRIFPAATCN
                     WIRALKKIPYVRLMLRSNVDQRHSEKTFSLRKIITGAFDTDLRAWAREAKDFGSPILI
                     EWGTEPNGDWFSWNGKWNGGPREGPTRYVEAYRHILDVMRAEGADNLRWVWHVNWLDQ
                     PEQKWNAFENYFPGPNYCDWVALSAYGPTTPRTPDGTESFVFKMRKAYPRLVKIAPGK
                     P"
BASE COUNT          867 a         1120 c         1080 g          901 t
ORIGIN      
        1 aataatcaga gttcgggtgc gcatcgaccc cgtgcaaaaa tgcaaacttt aatccgccga
       61 caaagggaca cccgcgcgaa aaaacgagcg agtaaccgac tgcccaccag agtatggtca
      121 ccagtccggc aatgccgaga cattgcgcca gcacggacag cacatttttc gctcgaacga
      181 gtccgccata aaagagcgcc aggcctggca acgtcataaa aagtaccagc gccgcgcacg
      241 tcatcatcca tgcgttgtaa ctcggaccag gcgcagcgat gttcgagctg ctggccgagc
      301 cgatatctac cccgcgcggc gaattggtta cgtacgcttc aagatcagcc acgcgttgct
      361 cgagcgacgg cgccgccgca ggcgacgacg ttcgaccaag cagcggagat acgaacgcaa
      421 tgattccggt gagcaacaag acccgtagca gcacgcgtgt ccgttataga cattcgggtt
      481 tttaacggca agaaaaatgg cgaacgtgat tttcacctcc tgtagggtgc gctgtcctca
      541 gcgcagtcct caaatccaat cagacaaact cctctgagga caagcggact ctacaacatg
      601 caaaccaaaa actccgccga gtgctggcca ggccaagttg acgtgctcgg cggagttctc
      661 tctaccggtc aaaaggagat tgtttgcgga atcatctcgc cgggagacga tcgaaacgaa
      721 acctgctgcg atacttctcc agtctcctcg tcgtcatcat catcctgatc atctgcatcg
      781 tccatatcgg cttcgtccgc gttgtctgtg tcggatcgcg gcgtgactgt gggcaagtca
      841 ttttgttgta agcggtcgta acgttcacgt acgtcggccg gcattttgtc gaggtcttcc
      901 ttggtttcga ctggaccact gaaaagcagt ttgccttgcg gatccttcac cgtgagcagt
      961 tttctcccgt cgacgttcgc caatttgagc tcgcctttgt cgtccgagaa aacaatctgc
     1021 gcttttctca gatcgatctt gctggccttg accgcgccgt cgtcttcaaa aaagatccga
     1081 agctggtccg ctgcacgacg ggcatcgtca cgcgcgcgtc tggcagcttc gtgggcttgc
     1141 gtcactgcat cgcggataat gccgcgttga tcgcctaatt gttctttgag ttgttccttg
     1201 agctcttgca tttggtcgct cagctcgcct ttggcatcga aatcccaatg ccagtcgtgg
     1261 ttgcccccag gaaaggcact gtgtcgctgc gacacttctt tcctggcaag tttagcggtg
     1321 agcttttgct cctgcccctt gcgcaagacg gtgagcgtca cttccgttcc gtcggagaaa
     1381 gtttgcagga gctttcgcaa ttgactcggc tcgatcagaa tttggtcgtt tagcattttg
     1441 aggatgtcgt tttgctgaac gccagcagtc gcagcggggc tgttcggctc tacataatca
     1501 acaaccaacc cgaagccttt cgccaaacca agctggtcac tcacgacagt tggcacctgc
     1561 gatgtgtcca caccgagata ggtgaccgga accttgggac ctttctcgtg atgtcctggc
     1621 attcccgatt cgtgatgtcc cggcatccct ggtggatgcg gcgggcgcgg cggctgtggc
     1681 ggcgcagccg gtgtttgtgc gaatgctgcg atcggcaaca acgcgatgat tgtgatggtg
     1741 agcacgtatt tcattttcat agtttgtttg ttaaatcatt gacctgagac tgggatgagc
     1801 acgacttcct cgctgggata cgagacgcgg agggatgcgc ccgtttccgg atttcgccat
     1861 cgccaagtct gttgcgtgtt gtagcgaacg cgtcgcaccg gtcgttctga gccgttagca
     1921 aaatgcaatc cttcgtcccg cgcgttataa acgaggttca tgccgccggc aggaacgaac
     1981 ctgctcggcg atctggaccg ttccatctcg agcggagccg gtcgggtctc cgatgcaggc
     2041 gaactacgcg cgacggtttg ttgctgctcg tgccgacgtt ccatcgtaac ggccgcgaac
     2101 aaaatcaaaa ccgcggcagc agcgacgcca aagcctaacg accaccaatt atagggcgtt
     2161 tctgtgaaac gccatcgctt gcatttggcg tctgacacag acgccctaca atttttgaga
     2221 gcttccccta cccgctcgaa aagcactggc gacggctgtg ctggtcgcag ctttttcagt
     2281 tccttttcaa gctcggaaaa atcgttcatt gcggttgcaa agttttcttg agattggtca
     2341 aggcgtaccg atagcgcgat gctgccgtgt tttgtgaaat tcccagcgcg ctgccaattt
     2401 cgctgaatgt aaaatcattc cagattttca aaaccagtac ctcccgctga tcgcgcggca
     2461 aagactccac tgcagcggcg agcgccgact gcgtgtcatc ttccaattga aagtggggct
     2521 caatgactgg ctcggtttca gccagaacgg tcgcctcacg tcgtgcgcgc cgcgcgtcgc
     2581 gacggataaa atcgagtgcg agagaacgaa ccgccgcgta gagcaagccg cgattatcga
     2641 tgtcgtgatt gcgacgccag aacttgacga aagcgtcctg aacaatgtct tccgcgtcgg
     2701 ccgcagattg cacccattga cgggcgaaca gaagcaatcc gggcgcaact tcagaaaagc
     2761 agttcctcca attctcatgg ctggcgatag gctccatgac cttttcacgg tctttacttt
     2821 caagacgtcg ccaagtgccg attttgtcta cgagcgtgaa caaaatggta gggcgagctc
     2881 gccgagcccg ctacggcgtg gccggcggtc gcgccccacc aacgttacgt tttcggcaac
     2941 gcgcgcagaa ttagatctcc aagccaatct ggatgaccga ctccagagcg atacgcccgg
     3001 agcgattcca cagaagaatt cacgcggaga gtggggtacg agttgagcct ccctgtcccg
     3061 acccagcaaa atcttgccac gcgcaagctc gccttcacct taagcagtgg caaagttatc
     3121 ctcctgttcc ggacctcaat gaagtgcgta acgtcgttgt tgctcatagt cgcggttgga
     3181 attttaaccc ccaatgcagc atcaatcatc cctgattcgt cggtgcacgc cacgcatgtc
     3241 gaattcgtcc cgccggcgcc agggaaactt tatcatggct tttactgggg tggtgttggc
     3301 actgacaaac acgatccgac tgagcacgat ctcacgcctg cggatgtcgc gcggtacgaa
     3361 caagcagtcg gcaaacaaac cgcttggatt tatttttcgg acaactggtt tgagtctcga
     3421 atatttccag ccgcaacgtg taactggatc cgcgctctca aaaaaattcc gtacgttcgg
     3481 ctgatgctcc ggtcgaacgt cgatcaaaga cattcggaga agaccttttc gcttcggaag
     3541 attatcaccg gcgcattcga taccgatctt cgcgcttggg cgcgcgaggc aaaggatttc
     3601 ggttcgccaa ttttgattga atggggaaca gagccgaatg gagactggtt tagctggaac
     3661 ggcaagtgga acggcggccc aagggaaggt ccgacccgct acgtcgaggc ttatcgtcac
     3721 attctcgatg tgatgcgcgc cgagggcgcg gataatttgc ggtgggtctg gcacgtgaac
     3781 tggctggatc agcccgagca aaaatggaac gcgttcgaga attattttcc cggtccaaac
     3841 tattgcgatt gggtcgcgct gagcgcctac ggaccaacaa cgcccagaac tcccgatggc
     3901 acggaaagtt tcgtgttcaa aatgcgcaag gcctatccgc gccttgtgaa aattgcgccc
     3961 ggcaagcc
//
LOCUS       DATDAJ010000346         2531 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1956772, whole genome shotgun sequence.
ACCESSION   DATDAJ010000346 DATDAJ010000000
VERSION     DATDAJ010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1956772"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            131..715
                     /gene="pth"
                     /locus_tag="VIS53_08550"
     CDS             131..715
                     /gene="pth"
                     /locus_tag="VIS53_08550"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEY5767871.1"
                     /translation="MDETPIRLIAGLGNPGSEYATTRHNIGFMVVDQLAAQFGSAWEK
                     SVPHAREDALSTKCGAVFLVKPLSFMNRSGYPLFAVAQFYKIEPQEILVVLDDFSLPL
                     GRLRLRERGGPGGHNGLESIIVQFGTEEIPRLRIGIGAAPREGSADYVLSRFFDEEKP
                     IVRSTIDSAVEALKCAIDNGLVSAMNTFNKSEEI"
     gene            712..1041
                     /gene="rpsF"
                     /locus_tag="VIS53_08555"
     CDS             712..1041
                     /gene="rpsF"
                     /locus_tag="VIS53_08555"
                     /inference="COORDINATES: protein motif:HMM:TIGR00166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEY5767872.1"
                     /translation="MNRRYEALLVLNTQAKEENVKEMIERLESEFEKEGAKVEQVQKM
                     DRRHFSYMAGSLDSGYYVNFILNTDPGSIVRLRTKFKLDPDVYRQHYQRLEENKEKAP
                     KKMAKSK"
     gene            1060..1494
                     /locus_tag="VIS53_08560"
     CDS             1060..1494
                     /locus_tag="VIS53_08560"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEY5767873.1"
                     /translation="MANLNKVLLLGNVTRDPEVRYTPKGSAVCDLGVAVNRTYTTDSG
                     EKREEVTFVDVTLWGRTAEVASEYLKKGRPVFIEGRLQMDTWDDKQTGQKRTRLRVVA
                     DNMQLLGGRPPGAAEAPGESRQTSAPPKKSASSEPDEDEIPF"
     gene            1563..>2531
                     /gene="dprA"
                     /locus_tag="VIS53_08565"
     CDS             1563..>2531
                     /gene="dprA"
                     /locus_tag="VIS53_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEY5767874.1"
                     /translation="MNATEACIALNMLPTVGPVRLRKLLEVFQEQQQILAAKRSDLRK
                     VEGIGNEVADQISNWESTIDLSAELQRIRDFGATVITQESPSYPRALREIHAPPIVLY
                     VWGELLDRDHHSIGVIGARRTTHYGTESAKKLAYQLAYAGLTVISGLARGIDTAAHQG
                     ALAAKGRTIAVIGSGLARLYPPENGPLAEKIRSGNGAIVSEFSMDIEPDRQTFPMRNR
                     IISGWSHGILVVEAGLNSGALITAAQALEQGRAVYAVPGHINAPSAMGSNRLIQQGAK
                     LVMDASDILEDLEILLPEAKPSPESAARPLPPLSDEERRVFGAIGAT"
BASE COUNT          623 a          683 c          738 g          487 t
ORIGIN      
        1 gatcaccgag aaaaaggaag agggcgaagc tgctgctcct gctccggctg ggaaagaaaa
       61 atctccaaaa gaaaaagaaa agaagtaatc cattttcggt tttcgatttt ggattttcga
      121 ttgcccgcgc gtggacgaaa caccaatccg gctcatcgct ggtctcggaa atcccggctc
      181 ggaatacgcg accacgcgac acaacattgg atttatggtt gtagaccagc tggccgcaca
      241 gtttggatcg gcgtgggaaa agtcggtccc gcacgcgcgg gaggacgcac tctccacgaa
      301 atgcggagct gtgtttctgg tgaaaccttt gagcttcatg aatcgcagcg ggtatccact
      361 gttcgcagtt gcgcagttct acaagatcga gccacaggaa atcctagtcg tgctagacga
      421 tttttccttg ccgctaggcc gtcttcgact ccgcgagcgg ggcggaccag gcggccataa
      481 cggccttgag tcaatcatcg tccaatttgg aacggaagag atcccacgtt tgcgcatcgg
      541 gattggggcc gcgccacgag aaggatcagc cgactacgtt ctgagtcgct tcttcgatga
      601 ggagaagcca atcgtgcgat ccaccatcga tagcgcagta gaagcgttga aatgtgcgat
      661 tgacaatggt ctcgtttcag ccatgaacac gtttaacaaa tccgaggaaa tatgaaccgt
      721 cgttacgaag ccctgctggt gctaaacacg caggctaaag aagaaaatgt aaaagaaatg
      781 atcgagcgcc tggaatccga gtttgagaag gaaggcgcga aggtcgagca ggtccaaaag
      841 atggacaggc gtcacttctc ctacatggct ggatcgctgg attccggtta ttacgtcaac
      901 ttcatcttga acaccgatcc tggatcgatc gtgcggctgc ggactaaatt caaactggat
      961 cctgacgttt atcgccagca ttaccagcgc ctcgaggaga ataaggagaa ggcgccaaaa
     1021 aaaatggcaa aatcgaaatg atttcggtat aagcgcgaca tggcgaacct caacaaagtt
     1081 cttttgcttg gaaatgtcac acgtgatcct gaagtgcgtt acacgcccaa aggcagcgcc
     1141 gtctgcgatc tcggcgtcgc ggtgaatcgg acttacacga cggacagcgg cgaaaaacgc
     1201 gaggaagtca cctttgtcga tgtcacgctc tggggacgaa cagcagaggt cgccagcgag
     1261 tacttgaaga aaggcagacc ggttttcatc gaaggacggc tgcaaatgga cacgtgggac
     1321 gacaagcaaa ccggacagaa gcgaacgcgc ctgcgtgtgg tggctgacaa catgcagctg
     1381 ctcggaggtc gacctcctgg cgcggccgaa gcacccgggg aaagccgaca aaccagcgca
     1441 ccacctaaga aatcggcgtc ttccgaaccg gacgaagacg agattccgtt ttgaggtagc
     1501 gcgagcctcc ggcttgcccc gtcggacgga tcgcaagcgg ggacgctcgc gctacctttc
     1561 ttatgaacgc gactgaagcc tgcatcgcgc tcaatatgct gccgacggtt gggccggtgc
     1621 ggttgcgcaa actgctggag gtttttcagg aacagcaaca aatcctcgcg gctaaacgta
     1681 gcgaccttcg caaggtggaa gggatcggaa acgaggttgc cgatcaaatc tcaaactggg
     1741 aatcgacgat tgatctatcg gccgagcttc aacggatccg cgatttcggt gcgactgtta
     1801 tcacgcagga atcgccgtcg tatccccgcg cgctccgcga gatccatgcg ccgccgatag
     1861 tgctctacgt ctggggcgaa ctcctggacc gcgatcatca cagcatcggc gttattggcg
     1921 cgcgacgcac cacccattac ggcacggaat cggccaagaa gcttgcctac caactagctt
     1981 acgcggggct gaccgtgatt agcggattgg cacgcggcat tgatacggct gctcaccagg
     2041 gtgcgctcgc ggcgaaaggc cgcaccatcg ccgtgatcgg ctccggatta gccagactgt
     2101 atccgccgga gaacgggccg ctggcggaga aaattcgcag cgggaatggc gcaatcgttt
     2161 ccgagttctc tatggacatc gaaccagatc gacaaacatt tccgatgcgc aatcgcatta
     2221 tttccgggtg gagccacggc atacttgttg tggaagcagg actgaatagc ggtgcgctta
     2281 tcacagcggc gcaggcactg gaacaaggcc gcgcagtcta cgcagtgccc ggccacatca
     2341 acgcaccgag cgcaatggga tcgaaccgcc tgattcagca gggcgcaaag ctggtcatgg
     2401 atgcatcaga cattctggaa gacttggaga ttctgttgcc cgaagcgaaa ccatctcccg
     2461 aaagcgctgc ccggccgttg ccgccgcttt cagacgagga gcgccgagtc ttcggagcta
     2521 ttggcgcgac c
//
LOCUS       DATDAJ010000347         4724 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1961904, whole genome shotgun sequence.
ACCESSION   DATDAJ010000347 DATDAJ010000000
VERSION     DATDAJ010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4724
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1961904"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VIS53_08570"
     CDS             complement(<1..592)
                     /locus_tag="VIS53_08570"
                     /inference="COORDINATES: protein motif:HMM:NF025048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767875.1"
                     /translation="MNSDNGSQESVRTSAPLPNSKKVYVSGKLHPEIRVPFREISLAP
                     TKTMSGEVEANEPVRVYDTSGPWADPDFHGDVTQGLPPLRAKWIRERGDVETIAGRAV
                     TLLDDGYLSQMHAEHAQRRNGSSKSQDPSSSQTSNLKPQTSKFAPHRPLRAKSGKVVT
                     QLAYARQGIITPEMEFIAIRENLGREILGSAGASRVG"
     regulatory      complement(817..917)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(968..1366)
                     /locus_tag="VIS53_08575"
     CDS             complement(968..1366)
                     /locus_tag="VIS53_08575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767876.1"
                     /translation="MPHRFLFALRSVAAVVGGYLVVAAGTILTFNVLVGQVTIDSNPR
                     QMILGTIGAVFAGIAGGVVAAVVAPRFPLGHAAAVLLFLALDTASVLAKGTGPAWFDL
                     AGSGILAISVLFGGWIIARRARSFVVRPAV"
     gene            complement(1444..1887)
                     /locus_tag="VIS53_08580"
     CDS             complement(1444..1887)
                     /locus_tag="VIS53_08580"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5767877.1"
                     /translation="MKKYISYTMMALLGTVALSTAASTEEMMQEKEKAAWQAFKDRKP
                     DDFKKVVSAKLVAVYAEGMSDLQKELADMQKWDMKSFAISDYKVTSDGSDTVVTTYNV
                     TIEGTYDGKDQTGIYSAASVWKKQKGKGEWQAIFHTNIKQAPAGG"
     gene            complement(2029..3237)
                     /locus_tag="VIS53_08585"
     CDS             complement(2029..3237)
                     /locus_tag="VIS53_08585"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY5767878.1"
                     /translation="MSLRLKRWSVLAFLFASFAFKASIAIAAAEWQVIKVNGHDYLSV
                     DNISKFYDLPAEVVPSGAKIQKETADRPLEFVSGSREAIINGARSWLCFPVIEHDGKS
                     LVTRTDVAKTIEPLVRPHRVPEVGNVQTVVLDPGHGGHDKGQMSRYGAEKDFALDVAR
                     KLRAILQAKGLRVIMTREGDYFVPLEVRAKIANSARNSIFVSIHFNASGDDPNATGFE
                     IFSFTPRGAPSTSDSAISSRAYNTQPGSTVDAQSMALSACIYHSLLGHLPEYDRGIKR
                     ARFAVLRLTKVPAVLIEGGFLTERGESKLISNKDWRAKLAGAIGVGIENYQALPIKKQ
                     PPMIVADYRRETKSAPVEPVKQEGGVKEADASLLQLVGRSALLSQPQPQPQTPTPAPT
                     ASLESEPIVP"
     gene            3411..4343
                     /locus_tag="VIS53_08590"
     CDS             3411..4343
                     /locus_tag="VIS53_08590"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HEY5767879.1"
                     /translation="MFLPIRRVTHGLIALLVALTLTPLAIDAAPQRKKFPQCCVWRVT
                     NAKAPFYLVGSIHALSKKDYPLPKPYDIALKDSSRFIFEFDPTEHAEFQKKFEAAAKY
                     PPGQDLRSKISPELLAWLRKNMFTVVPDGRDGKGERFVSFDSQLRYKPWWIAQHLAAP
                     ASYSKASTSHGLDNYFVDHAIKLGKEISGLESVNEHVAVMGGLSDRDSEFMLQDALSQ
                     PDNADKESGRMYKAWRKGDTNGLWAGDSTLRSKAPRIAARFVDDRNVKWIPRIEAELK
                     TGKPTAIVAGALHFSGPRSVITLLQKRGYVIEQL"
BASE COUNT         1045 a         1351 c         1265 g         1063 t
ORIGIN      
        1 atcccacccg cgaggcgccc gcgctcccca gaatttcgcg gccgagattc tcgcggatcg
       61 cgatgaactc catttcggga gtgatgattc cctgacgcgc gtacgctaat tgcgtaacca
      121 ctttgccgga tttcgcccgc aaaggacgat gcggggcaaa ctttgatgtt tgaggcttga
      181 ggtttgaagt ttgactggag cttggatctt gggatttgga gcttccattg cggcgctgcg
      241 catgctcggc gtgcatctgt gagagatacc catcgtccag tagcgttacg gcgcgacccg
      301 caatggtttc aacgtcgcca cgctcgcgaa tccattttgc gcgcaagggc ggaagtcctt
      361 gtgtcacatc gccatgaaaa tccggatcgg cccatggccc gcttgtgtcg tacacacgca
      421 cgggttcgtt cgcttcaacc tcgcccgaca tcgtctttgt cggtgcgagc gagatttctc
      481 ggaacggaac gcgaatttcg gggtgcaact ttcctgaaac gtaaactttc ttcgaattcg
      541 ggagaggggc gctcgtcctc acggattctt gggaaccgtt gtcgctgttc atatgctcat
      601 agaaatatcg aaagatttga ttcgctcgct tcccgctcgc tcaacctccg gccttcccgt
      661 ccatctcgcg gcgtccctag ccgctcgatt ctcgacttcg ctcgggatga cagaagacgg
      721 cacccgaatg tcagattcgg aacattcgta tcgattcgtg tccatttgtg gttaaaaagc
      781 catgcgcgga aaaatcgcat agctgaaatc ccagtccggt atcggaccct cgctcccttc
      841 ggcggcatta cccgcatcag gttcaagggg tcgtccaatt ggacctctca gccattgcgg
      901 ctcccccgca ctacgaagaa aaggataaag gaagaagtaa gaagtaaaag tggaaattgt
      961 tgcgcgatca aaccgcggga cgcaccacaa aactgcgagc gcgccgcgcg atgatccagc
     1021 caccaaacag aacgctaatg gcgagaatgc cgcttccagc gagatcgaac caagccggac
     1081 cagttccttt cgccagcacc gaagcagtat caagcgcgag aaacagcaga acagcagcgg
     1141 cgtgtccgag tgggaatcgt ggcgcgacaa ctgcagctac aactcctcca gcgatacctg
     1201 cgaacaccgc gccaattgtt ccgagaatca tttggcgcgg attggaatcg attgtcacct
     1261 gacccaccaa gacgttgaac gtgagaattg ttccggcggc aacaaccaaa tatccgccga
     1321 ccaccgcggc gacgctgcga agagcgaaaa gaaatcggtg cggcatcgga cattttacct
     1381 cattcgcgcc tctggcatag gggggatttg gcaaccctgc tttcgccgat tccgcggacg
     1441 gcactatccc ccggctgggg cctgtttgat gttcgtgtga aagatcgcct gccattcacc
     1501 cttgcccttc tgtttcttcc agacggaggc ggcgctgtag atccccgttt gatcttttcc
     1561 gtcgtaggtg ccttcgatcg tcacgttgta ggtggtgaca actgtgtcgg acccatcgga
     1621 cgtgactttg tagtcgctga tcgcaaacga tttcatgtcc catttctgca tgtccgccaa
     1681 ttctttttgc aggtcggaca tgccttcggc gtagacagcc accaacttcg cagacacgac
     1741 cttcttgaaa tcgtcgggct ttctgtcttt aaacgcctgc caggctgcct tctctttttc
     1801 ctgcatcatc tcctcagtgg acgcggcggt cgacagagca accgttccaa gcaatgccat
     1861 cattgtgtag ctgatatatt ttttcattat gtgctttcgt tgaggttggg tgcagatcat
     1921 ctggtgcatt cgagcaaacc gtcaagggca atcggcactc tgtccaaata cacctgacaa
     1981 acctttcaag ccgtcggcgc ggcaagcacg cctgccgcta cgcaatcttc acgggacaat
     2041 gggctcggat tcaagagatg ctgttggcgc aggagttggc gtctgcggct gcggctgcgg
     2101 ctgcgagagc aaagcggatc ggccgaccag ctgaagtaag ctcgcatctg cttctttcac
     2161 acctccttcc tgcttgacgg gttcaaccgg cgccgacttc gtctcacgac gataatcagc
     2221 aacgatcatt ggcggctgtt tcttgatcgg cagcgcctgg taattttcga ttcctacacc
     2281 aatcgcgccc gccagtttcg cgcgccaatc tttattcgag atcaatttac tctcgccgcg
     2341 ctccgtcaaa aacccgcctt cgatcagcac cgccggcacc ttcgtcaggc gtagcacagc
     2401 gaaccgcgcg cgtttgatac cacggtcgta ctcggggaga tgaccgagaa gcgaatgata
     2461 aatgcacgcg gaaagcgcca tgctttgcgc gtcgaccgtg ctgccgggtt gcgtgttgta
     2521 agccctcgac gaaatggcgc tgtcggaagt agacggcgca ccacgcggcg taaacgaaaa
     2581 aatctcgaac ccggtggcgt tcggatcgtc gccgctcgcg ttgaaatgga tacttacaaa
     2641 aatggaattg cgcgctgagt tggcgatctt cgcgcgcact tccaacggca caaaataatc
     2701 gccctcccgt gtcatgatca cgcgcaatcc tttcgcttgc agaatcgcgc ggagttttcg
     2761 cgcgacatcc agggcaaaat ctttttccgc tccgtaacgg ctcatctgcc ctttgtcgtg
     2821 tccgccgtgg ccgggatcca gaacgaccgt ctgaacgttg cccacctccg ggactcggtg
     2881 tggccgcacg agcggctcaa tcgttttcgc tacgtcggtc cgcgtcacta gagatttgcc
     2941 atcgtgttca atcactggga agcacaacca acttcgagcg ccattgatga tggcttccct
     3001 gctgccgctg acaaattcca gcggacgatc agcggtctct ttttgtattt tcgccccgga
     3061 cgggacaacc tctgcgggca agtcgtaaaa cttggaaatg ttgtccacgc tcagataatc
     3121 gtggccattt actttgatta cctgccactc ggcagcagca atcgcgattg aggctttgaa
     3181 agcaaaggaa gcgaacaaaa acgcgagaac ggaccaacgc ttcaatcgga gggacatgcc
     3241 tgcgctatcg tatcaaaaac cgcgtccatc tcaaggagtg acgacttcga agtctcgaaa
     3301 gttttcagag ttgcccgcct ccgctgaacg catacggcag gcgagccaat tgttccttgt
     3361 gcattcaaac tcccgattga cttgcggctt tttcgcgcta aacaccggaa atgtttttgc
     3421 caattcgccg cgtcacccac ggtctgatcg cattacttgt cgcactaact ctgacaccgc
     3481 tcgcgattga cgcagctccg caaaggaaaa aatttccgca atgttgtgtc tggcgcgtga
     3541 ccaatgcgaa ggcgccattt tatctcgtgg gttcaattca cgcgctgagc aaaaaagatt
     3601 atccactgcc caagccttat gacattgcgc tgaaagacag cagccggttc atctttgaat
     3661 tcgatccgac cgagcacgcg gaattccaaa agaagtttga ggccgcggcc aagtatccgc
     3721 ccggacaaga cctccgttcg aagataagcc cagagttgct agcgtggctc cgtaaaaaca
     3781 tgtttaccgt ggtacccgat ggtcgcgacg gaaagggtga gcgattcgtg agtttcgaca
     3841 gccagcttcg ttacaagccc tggtggatcg ctcagcatct ggccgcaccg gcatcctaca
     3901 gcaaagcatc tacctcgcat ggcttggata attattttgt ggatcacgcc atcaaattgg
     3961 gaaaggaaat cagcggacta gagtcggtta atgaacatgt agcggtgatg ggtgggttgt
     4021 ccgatcggga cagcgagttc atgctgcagg acgcgctgag tcagcccgac aatgccgaca
     4081 aggagtccgg caggatgtac aaagcatggc ggaagggcga caccaatggg ctgtgggcag
     4141 gcgactcgac gctgcggtca aaagcgccaa ggattgcggc gcgtttcgtc gatgatcgca
     4201 acgtgaaatg gattccacga atcgaggcgg aactgaaaac cggcaagccg accgcgattg
     4261 tcgcgggcgc gcttcatttt tccggtcccc gcagcgtgat cacgctgttg caaaagcgcg
     4321 gctacgtgat tgagcagttg tagccgtggc tctgggtagc gcacgcgtct cgcgtgctgg
     4381 cgagcgcgtc ctcgcgatcg cgaacttttc atctaacgca tccatgttca ctccggcgag
     4441 aattcaaagg aaagattgtt tcggcgtgac gccgaaacca acacgcgaga cgcgtgcgct
     4501 acccagattc gcggggtcgc gcttcaacgt aattgcacct gcaaggtcta atctgggtta
     4561 acgactcgca gaatttctga tccccactta tgaaatcgtt tatcaccatt atcacgtcgg
     4621 ttgtttgttc gttagtcgcc gttgttgcgg cgcctcagga acagaccgag caaaaccccc
     4681 agccactcga tgccagcaac aggaattcat cagtaaaacc gggc
//
LOCUS       DATDAJ010000348         3935 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1962146, whole genome shotgun sequence.
ACCESSION   DATDAJ010000348 DATDAJ010000000
VERSION     DATDAJ010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3935
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1962146"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2190
                     /locus_tag="VIS53_08595"
     CDS             <1..2190
                     /locus_tag="VIS53_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY5767880.1"
                     /translation="DLKTAPNKEKVIGEAEGAVMKQQKLFERGIITNQERYNQVLDTW
                     THAGDQISNVMFREIEQNQDRKEYNPINLMVDSGARGNRQQVRQLAGMRGLMAKPSGE
                     IIERPITSNFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRKLVDAAQDVIIVK
                     DDCGTVNGIVVRSIYEGDEEVVDLGQRIIGRVSCETIGDPVEKRKKIVKANQYVDEKI
                     AADLQRIGVEQLKIRSVLTCECGRGVCAMCYGRNLATGDFVKLGEAVGIIAAQSIGEP
                     GTQLTMRTFHIGGTASQTFKQPIIKAKNDGAVQFNDLRTVQALDGSWIVLNKNGSIGV
                     HNEEGRELERYNVVVGSVISKEDGASVKKGETFVQWDPYNVPILTDKGGKIEFRDMIA
                     GVTIKREVDEATGLMGTMVIEHKEDLHPQVVIVDDKKEVLASYSIPAGAHVIVEEGQK
                     VRAGALLAKTPRKVAKTKDITGGLPRVAELFEARRPKDAAEIGKIDGIVELGGTVRGK
                     RSLILKDPDTGAEEEHLIPLTKHIIVFKGDFVKKGQQLTEGPIVPHEILEVCGPQELQ
                     EHLVNEVQEVYRLQGVEINDKHIEIIVRQMLRKVKITDPGDTSLLWGDQVDKLDFEVE
                     NKKVVEKGGKPAEAVPVLLGITKASLETDSFISAASFQDTTRVLTEAATLGKIDRLRG
                     FKENVIMGHLIPAGTGFPEHRQLKLVEKGEPVGAPVMEEAEPQPAIG"
     gene            2213..2800
                     /locus_tag="VIS53_08600"
     CDS             2213..2800
                     /locus_tag="VIS53_08600"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEY5767881.1"
                     /translation="MGRRSTGASKPHALQFGFVSIVTKTGDKGETSLMYGRRLSKADP
                     RVDAYGCVDELNSALGLARSVATDNFLSDQILAAQRDLIIVMGELATAPSDQERYTKD
                     GFHLTTTEMVDRITSVIFDLEKDKSLYPKDWVVPGGMPVSAALDFARTTCRRAERQIA
                     AFGVEEKDSNPEILRYLNRLSDLCWVLARYAEKHA"
     gene            2976..3551
                     /locus_tag="VIS53_08605"
     CDS             2976..3551
                     /locus_tag="VIS53_08605"
                     /inference="COORDINATES: protein motif:HMM:NF042727.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6662 family protein"
                     /protein_id="HEY5767882.1"
                     /translation="MSNSSVSCAARKRCPRTIWGFINSLLWAKERAKARTTELISKRS
                     RICIYRSIPGEPFAHPEIDFQKDFLEDRLICALDLGVEWAWGKKPAEEYPREVSFEGA
                     AGVAYRFAPNWYAGVEIHTRWEYPLFDLYNFEHRVFYAGPSIHYSQKNWWATLTWNYQ
                     VYGKGVGEPADGQTFAEETRQLFRLKVGLNF"
     gene            3558..>3935
                     /locus_tag="VIS53_08610"
     CDS             3558..>3935
                     /locus_tag="VIS53_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEY5767883.1"
                     /translation="MKSEFVFIALPISALVAPSTFAVQYLTVDQAQRAIFPGKSLTAV
                     PVKLAPAQRKAIEQASGVRVLHDEQQVWRVSGGGWFIVDEVVGKHEFITYAVGLNANG
                     SVKQIEGMDYRETYGGEIRNENWR"
BASE COUNT          969 a         1002 c         1142 g          822 t
ORIGIN      
        1 gacctcaaga ccgcgccgaa caaggaaaaa gtgattggcg aagccgaagg cgccgtgatg
       61 aagcagcaga agctgttcga acgcggcatc attaccaatc aggaacgata caaccaggtt
      121 ctcgatacct ggacgcacgc cggcgatcaa atctccaacg taatgttccg cgagatcgag
      181 caaaatcagg atcgcaagga gtataatccg atcaatttaa tggtcgattc cggcgcgcgc
      241 ggcaatcggc aacaggtacg ccagctcgcc ggtatgcgcg gtttgatggc caagccaagc
      301 ggcgaaatca ttgagcgtcc gatcacgtca aatttccgcg aaggactcac cgtgctggag
      361 tacttcattt ccacccacgg tgcacgcaaa ggtcttgccg atacggcgct aaaaaccgcg
      421 gactccggtt atctgacccg caaactcgtg gatgcggcac aggatgtgat catcgttaag
      481 gacgattgcg gtactgtaaa cggcatcgtg gtgcgctcga tttacgaagg cgacgaggaa
      541 gtcgtggacc ttggtcagcg catcattggg cgcgtgagct gcgagacaat cggcgacccg
      601 gtggagaaaa ggaaaaagat cgttaaggca aaccaatacg tcgacgaaaa gatcgcagcc
      661 gacttgcagc gcatcggcgt cgaacaactt aagatccggt cggtgctcac atgcgagtgt
      721 ggccgaggcg tgtgcgcgat gtgctacggt cgcaacctcg ccaccgggga cttcgtgaag
      781 ctcggtgaag ctgtcggtat tatcgccgcg cagtccatcg gcgagccggg gacgcagttg
      841 acgatgcgga cgtttcacat cggtggtacc gccagtcaga catttaagca gccgatcatt
      901 aaggcgaaga acgacggcgc agtgcagttc aatgatttgc ggaccgtgca ggcactcgac
      961 ggaagctgga tcgtcttgaa caaaaacggc tcgatcggcg tgcataacga agagggccgc
     1021 gaactggagc gctacaacgt cgttgtcggc tcagtgattt ccaaggagga cggggcgtct
     1081 gtgaagaagg gcgaaacgtt tgtgcaatgg gatccataca acgtgccgat cctcaccgac
     1141 aaaggcggaa agatcgaatt ccgcgacatg attgccggag tcacaatcaa acgcgaagtc
     1201 gatgaagcaa ccggccttat gggcaccatg gttatcgagc ataaggaaga cctgcatcca
     1261 caagtggtta ttgtggatga caaaaaggaa gtgctcgcga gctattcaat tcccgccggc
     1321 gctcacgtca tcgtcgagga aggccaaaag gtgcgggcag gcgcgttgct ggcaaaaacc
     1381 ccacgcaaag tcgcaaaaac aaaggatatc accggtggtc tgccacgggt tgcggaattg
     1441 ttcgaagctc gccggccgaa ggatgcggct gagatcggta agatcgacgg catcgtcgag
     1501 ctaggtggaa ctgtacgcgg caaacgcagc ttgattctga aagatccgga caccggcgct
     1561 gaggaagagc atctcattcc gctcaccaag cacatcatcg tattcaaagg cgatttcgtg
     1621 aagaagggtc aacaactgac cgaagggccc attgtgccgc acgagatttt ggaagtgtgc
     1681 ggcccgcagg agttacagga gcacctggtg aacgaagtgc aggaggtgta tcgactccaa
     1741 ggcgtggaga tcaacgataa gcacatcgag atcatcgtgc gccaaatgtt gcgcaaggtg
     1801 aaaatcaccg atcccggcga tacctcgctg ctctggggcg atcaggtcga taaactcgac
     1861 ttcgaggtag agaacaagaa agtcgtggag aaaggcggca agcctgcgga ggcagttccg
     1921 gtgctgctcg gtatcaccaa ggcttcgttg gaaaccgaca gctttatttc tgcggcttcg
     1981 ttccaggata cgacgcgtgt gctcactgaa gcggctacgc tgggcaaaat cgacaggctg
     2041 cgcggcttca aggaaaacgt gatcatgggt cacctaattc ctgccggaac tgggttccct
     2101 gaacatcgcc agctcaagct ggtcgaaaaa ggcgaaccgg ttggcgcgcc cgtgatggaa
     2161 gaagccgaac cgcaacctgc gatcggttag cgccgtaatt gtgggcgtct gtatgggacg
     2221 ccgttcaact ggcgcgagca aaccacacgc tctacagttt ggtttcgtgt ccatcgtcac
     2281 caaaactggc gacaaaggcg aaacgtcgct gatgtacgga cggcggttat caaaagccga
     2341 tccgcgtgtg gacgcctatg gatgcgttga tgagttgaac tccgcgcttg gtctcgcccg
     2401 gtccgtagcg actgataatt tcctttcgga tcaaatcctc gcagcacaaa gagatttgat
     2461 catcgtgatg ggagagctag ctacggcgcc atccgaccag gaacgctaca ctaaagatgg
     2521 ctttcatctc actacaacag agatggtcga tcggattact tccgtcattt tcgatcttga
     2581 gaaggataaa tcgctgtatc ccaaagactg ggtcgtgccc ggtggaatgc cggtttctgc
     2641 ggcactggat tttgctcgca caacatgccg ccgtgcagag cgccagattg ccgcattcgg
     2701 cgtcgaagaa aaagattcga atccagaaat cctacgttat ctcaatcggc tttccgatct
     2761 ttgctgggtg ctcgcgcgat acgcggaaaa acatgcgtag ccttctagct agcggcgtta
     2821 ttggtgtgac gcgccctgga ttgcgccgca atgtggcatc aaaaattgac aaccgtccga
     2881 cagcaggctt ttgccggaca tgttatgtat ggaccgcatg aaattcctac cagctttggc
     2941 cgcgtttttg ttttgcgttt ctatcgtgcg cggagatgag caactcttcg gtttcgtgcg
     3001 cggcgcggaa acgctgcccg cgcaccattt gggggtttat caattcgtta ctttgggcga
     3061 aggaaagagc gaaggcacgt actacggaac tcatttcgaa acgaagccga atatgcattt
     3121 accgatcaat tccaggcgag cctttcgctc atcccgagat cgatttccaa aaagacttcc
     3181 tggaagatcg actaatttgc gctctcgatc ttggcgtgga atgggcctgg ggcaaaaagc
     3241 ctgccgagga atatccgaga gaagtctctt tcgaaggcgc agctggtgtc gcctatcgct
     3301 ttgctccaaa ctggtatgcg ggcgtggaaa ttcacacccg atgggaatat ccgcttttcg
     3361 acctatataa cttcgagcac cgcgtttttt atgctggtcc aagtattcat tactcccaaa
     3421 agaattggtg ggccacgctt acctggaatt atcaggttta cggcaagggt gtaggcgagc
     3481 cggcggatgg gcaaaccttc gctgaggaaa cgcgacaatt gtttcggtta aaagtaggac
     3541 ttaattttta gcccgcgatg aagtcggaat tcgttttcat cgccctgccg atttctgcgc
     3601 tggttgcccc atccacgttt gcagttcaat acctgacagt cgatcaagcg cagcgtgcga
     3661 tttttcctgg caaatccttg acggcagtgc cggtgaaact ggctccagcg caacgcaaag
     3721 ccatcgagca ggccagcggc gtgcgcgtgt tgcacgacga gcaacaagtc tggcgcgtga
     3781 gcggtggcgg ctggttcata gtcgatgaag tcgtcggcaa acatgagttt atcacctacg
     3841 cggtcggcct gaatgccaat ggctcagtca aacaaattga ggggatggat tatcgcgaaa
     3901 cctatggggg cgaaattcgc aatgaaaact ggcgc
//
LOCUS       DATDAJ010000349         3619 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1971519, whole genome shotgun sequence.
ACCESSION   DATDAJ010000349 DATDAJ010000000
VERSION     DATDAJ010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3619
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1971519"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..689)
                     /locus_tag="VIS53_08615"
     CDS             complement(<1..689)
                     /locus_tag="VIS53_08615"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF001453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEY5767884.1"
                     /translation="MRIIAQYLLFAAIATTGCGQQTPTVDDFAAQRQRMVEKHLKQRG
                     IKDERVLAAMAKVPREEFIPADARPGAYEDGPLPIGYDQTISQPYIVAFMTEQLRPRP
                     SDRVLEIGSGSGYQAAILAELVADVYTIDIVERLVKTAEATLQRLSYKNVHIKVGDGY
                     KGWPEEAPFDAVIVTCAPEKVPQPLVDQLKDGGRMVIPVGERFAQQLYLLEKKNGQLK
                     ESATLPVRFVP"
     gene            929..2842
                     /gene="thrS"
                     /locus_tag="VIS53_08620"
     CDS             929..2842
                     /gene="thrS"
                     /locus_tag="VIS53_08620"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEY5767885.1"
                     /translation="MAEQRKTLEQREQMTDIERLRHSAAHVLATAILKIWPEAQFAAG
                     PPVENGFYYDVDLPHRISPDDFEKIEAEMKNEIKANHPFERVEVSRDEALALGKQGRL
                     AALGERPEPSKFKLDIIENIPPDEKISLYRNGEFIDLCAGPHVMRTGNIGAFKLTTVA
                     SAYYKGDEKNPQLQRVYGTAFKTKKELDDYFALLEEAKKRDHRKLGRELELFVFDDDV
                     GPGLPMFLPRGAVIAEELEKLAKETEFTAGYQRVLTPHIARESLYLKSGHLPYYAESM
                     FPPMELEDKLPSLSRSAGFQPDVEEAEQDARPPSHAGSVTSDRYYLRAMNCPHHHKLF
                     GSIPRSYRDLPLRLAEYGTCYRYEKSGELFGLMRVRLLHMNDAHLYMTPEQFEDEFNA
                     VNEMYLNYFKLFGIEKYLMRFSTHDPSKLGQKFVDEPELWKQTEEMTRRVLKDSGIDY
                     VEVPNEAAFYGPKIDVQVWSVIGREFTLATNQVDFAQPRSFDLRYKDRDNVDKIPICI
                     HRAPLGTHERFIGFLIEHYAGNFPLWLSPEQVRILTIGDDPKLFDYARSILNELRSHQ
                     VRAEIDESTDKINGKIQRAEQMKLHTMFVIGKRDMESNAVSVRVHGKGNLGAKPRDEA
                     IAEIQQSIRERRP"
     gene            complement(3019..>3619)
                     /locus_tag="VIS53_08625"
     CDS             complement(3019..>3619)
                     /locus_tag="VIS53_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY5767886.1"
                     /translation="SLPSTEYAVAVYYIIVTAEASANLARFDGVRYGYRAENPKDILD
                     LYGRTREEGFGPEVKRRIILGTYVLSSGYYDAYYLRAQKVRELIRRDFHKVFEKVDAL
                     ISPTSPVAAFKLGERVADPLQMYLADIFTIAANLAGICGISVPCGFAGLNGHHLPIGL
                     QLLGKPLDEARILQVAHAYEQSTDWHKIRPPIASTPPKL"
BASE COUNT          854 a         1028 c          990 g          747 t
ORIGIN      
        1 atcggcacaa agcgaaccgg cagcgtggcg ctttctttca actggccgtt tttcttttcg
       61 agcagataaa gctgctgggc gaatcgttcg ccgacgggaa tgaccatgcg cccgccgtct
      121 ttgagttgat cgacaagggg ttgcggaact ttctccggcg cgcaggtcac gatgactgca
      181 tcgaacggcg cttcttcggg ccagcctttg taaccgtcgc ccaccttgat atgcacgttc
      241 ttgtagctca aacgctgcag tgtggcttcc gcagttttca ccagccgctc gacgatgtcg
      301 atcgtgtaaa cgtccgccac cagctcggct aaaatcgccg cctgataacc cgaaccgctg
      361 ccgatttcta aaacccggtc gctcggtctc ggtcgcagtt gttctgtcat gaacgccacg
      421 atgtatggct gcgatatcgt ttggtcgtaa ccgatgggca atggcccgtc ctcgtacgcg
      481 ccaggacgcg catccgcagg gataaactcc tcgcgcggca ccttggccat ggctgccagc
      541 acgcgttcgt ccttgatacc gcgttgtttc aaatgtttct ccaccatccg ctggcgctgc
      601 gctgcaaaat cgtcaacggt cggggtctgt tggccgcagc ccgtcgtagc aatcgcagca
      661 aaaaggagat actgcgcaat gattcgcatt cgccgaaaga taacgccgca tgcgcggctg
      721 cgaaaggagc gctgcgtctc ttccgagact cgctatcgca ccgccatgac ggcgttcatg
      781 tgacgcaggc gatcggccag cgttttcatc acatgcatcg caaaatgcgg cgtctgccgt
      841 agctttgtgc gaaggctggg agcaatctct caacatcctc ttcggctact tgtcattccg
      901 agcgaagtcg aggaatctct ggatataaat ggctgagcaa cgcaaaactt tagagcagcg
      961 cgagcaaatg acagatattg aacggctccg tcattccgcg gctcatgtgt tagccacggc
     1021 catcttgaaa atttggccgg aagcgcagtt cgccgcaggg ccgccggtgg agaacggctt
     1081 ttattacgac gtcgaccttc cgcatcggat ttcaccggac gatttcgaga agatcgaggc
     1141 ggaaatgaaa aacgaaatca aagcgaacca cccattcgaa cgggtggaag tttcacgaga
     1201 cgaagcactc gcgctcggaa agcaaggccg gctcgccgct ctgggcgaac gtcccgagcc
     1261 cagcaaattc aagctcgaca tcatcgaaaa cattccgccc gacgaaaaga tttcactcta
     1321 tcgcaacggc gagttcatcg atctttgcgc gggaccgcac gtgatgcgga cgggaaacat
     1381 cggcgcgttc aagctgacca ccgttgccag cgcatattac aagggcgacg aaaaaaatcc
     1441 gcagcttcaa cgcgtttacg gcaccgcgtt caaaactaag aaggaactcg atgattactt
     1501 cgcgctgctc gaggaagcga agaagcgcga ccatcggaag ctcgggcggg aactcgagct
     1561 cttcgttttc gacgacgacg tcgggccggg cttgccgatg ttcctacccc gtggcgcagt
     1621 catagccgag gaactggaaa agctcgcaaa ggaaaccgag ttcaccgcgg gttatcagcg
     1681 cgtcctcacg ccgcacatcg cacgcgaaag cctgtacctg aagagcggcc atctccccta
     1741 ctatgccgag tcaatgtttc cgccgatgga actggaagac aagcttccca gcttgtctcg
     1801 gtcggccggc ttccagccgg acgtggaaga ggccgagcaa gatgctcgtc cgccgagtca
     1861 cgctggcagc gtgacttccg atcgctatta cctaagagcg atgaattgcc cgcatcatca
     1921 caagctgttc gggtcgattc caaggagcta tcgcgatctg ccattgcggc tggcggaata
     1981 cggaacgtgt taccgctacg agaagagcgg cgagttgttc ggactcatgc gagtgcgttt
     2041 gctgcacatg aacgacgcgc acctgtacat gaccccggag cagttcgagg acgagttcaa
     2101 cgcggtgaac gaaatgtatt tgaactattt caagctcttc ggtatcgaga aatatctgat
     2161 gcgtttttcg acgcatgatc catccaagct cgggcaaaaa tttgtcgatg agccggagct
     2221 ttggaagcag accgaagaga tgaccagacg cgtgctaaaa gattccggca ttgattatgt
     2281 cgaagtgcct aacgaggccg cgttttacgg accgaaaatc gacgtgcagg tttggagcgt
     2341 gatcggacgt gagttcacgc tcgcgaccaa ccaggtcgat tttgcgcagc cgcgcagttt
     2401 cgatcttcgc tacaaggacc gcgataacgt cgataagatc ccgatctgca tccatcgcgc
     2461 gccgctcggc acgcacgaac gtttcatcgg atttttgatc gagcattacg ccggcaattt
     2521 cccgctttgg ttgtctcctg agcaggtgcg catcctcacc atcggcgacg acccgaagtt
     2581 attcgattac gcacgatcga ttctgaacga actacgcagt catcaagtgc gcgcggagat
     2641 cgacgaaagc accgataaga tcaacggcaa aatccagcgc gccgaacaaa tgaaactcca
     2701 caccatgttc gtcatcggga aacgcgacat ggaaagcaat gccgtgagcg tccgcgttca
     2761 cggcaagggc aacctcggcg ccaaaccgcg cgacgaagct atcgccgaaa tccagcaatc
     2821 gattcgggag cgacgccctt aacaagctgc tacacaagaa acggagcctg caggatggaa
     2881 aagccgcaca acagtgccgc actccaaaac gtggccgtga atccaaccgc attttatcgc
     2941 tcgcgttttg gagtgcggcg gtgctccgcc gctttcgacg actcacccga accggcccaa
     3001 actattgcgc cgagtttgct atagtttcgg aggggtcgag gcgattggcg gacgtatctt
     3061 gtgccagtct gtgctttgct cgtaggcgtg tgcgacttgc aaaatgcgtg cttcgtccag
     3121 cggtttgcct aacaactgca acccgatcgg cagatggtgt ccgttcagac cggcgaaacc
     3181 gcatgggacg ctaatcccac agatgccagc caggttggct gcgatggtga aaatatccgc
     3241 aagatacatt tgcaatgggt cagcaacgcg ttcgcctaac ttgaatgctg ctacggggga
     3301 agtcggcgag attaaagcat cgaccttctc aaaaaccttg tgaaaatccc gccgaatcag
     3361 ctcgcggact ttttgcgcgc gcaagtaata ggcatcgtaa taaccggagc tcaaaacgta
     3421 agtgccaaga ataattctcc gtttcacttc cggtccgaaa ccttcctcac gcgtacggcc
     3481 ataaagatcg agaatgtctt taggattttc agcacgatac ccgtaacgca cgccatcgaa
     3541 gcgggcgagg ttagcggaag cttccgcggt gacaataatg taataaaccg cgaccgcata
     3601 ttcagtgctg ggcaacgag
//
LOCUS       DATDAJ010000350         7778 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1972520, whole genome shotgun sequence.
ACCESSION   DATDAJ010000350 DATDAJ010000000
VERSION     DATDAJ010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7778
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1972520"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..730)
                     /locus_tag="VIS53_08630"
     CDS             complement(140..730)
                     /locus_tag="VIS53_08630"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY5767887.1"
                     /translation="MKDGDWKTISSERRFADRNLEVVTDRVQTPARPDPRSWTIVHRK
                     PAVVVAPMTPDGKIIFIRQERIPIGQAIWEMPSGQIDDHDASEDKIKDTALREVREET
                     GYELAPNGELISLGYFFSSPGFTDERGYFFLARPVQPCAEGPDREEGESILDCRGFNS
                     EEIGRMIGDNEIRDANTLGICATLAARGLLSLAPRP"
     gene            complement(966..1346)
                     /gene="folB"
                     /locus_tag="VIS53_08635"
     CDS             complement(966..1346)
                     /gene="folB"
                     /locus_tag="VIS53_08635"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEY5767888.1"
                     /translation="MPNQLHFSPDEIHIEQLDVFTRIGVPEEERANPQRLTVSISFWP
                     YQQANDLADHIERTVNYSTVAEETKNFLRAESVSLIETLADRVARHLLKSFPIQKVTV
                     ELRKFVLQDAKYVSVTVTRTASVG"
     gene            1452..3332
                     /locus_tag="VIS53_08640"
     CDS             1452..3332
                     /locus_tag="VIS53_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5767889.1"
                     /translation="MKTVWRVFAYLKRYPWLAAGTLACAIMGTLMVIVFPSVTKWIIE
                     DVVRANRPDKLLPLILLAAAAFVIQHLFNSLRIILNNTFEQKVIFDLRSDLYSHIQVL
                     PLRWFDNRATGDLMTRVIEDVNAVERVLIDGIEQGVVAVLQIVIVVTVMFYWNAKLAL
                     LALVPLPLLIAGALAYTLTAHRRYRLQRRAASNINALLHDNLAGVRQIKSFAREREEH
                     TRFNRASDQLRHATLVVMRTWAIYSPSMSMFEAIGALLVLGFGSHDVLTGSLQLGDLI
                     GILMLMAFLYDPISRLHQLNQLVQAGRAAGERVFEILDEDAEPGVVAKIKSVEEPDRF
                     PRIKRDDTREAVSFPYKPALPIIGDIRYEDVSFSYVDGLSALRHISFHALPGTTTALV
                     GATGAGKSTLVNLLVRFYEFDSGQIYVDDKPVREYDLRTLREAIGVVTQESFLFNGSI
                     RENLLMGKPTASDAELWRAVDAANARQFIERLPQGLESVVGERGVKLSVGEKQRLSIA
                     RALLKDPPILILDEATASVDTATERLIQEALEHLMANRTSIVIAHRLSTIVGADQILV
                     LDHGHVVERGSHEELLVLDQKYAQLCRQSLLESSPQREGEPQEEIVTPEVAEPEEERL
                     PV"
     gene            complement(3358..3906)
                     /locus_tag="VIS53_08645"
     CDS             complement(3358..3906)
                     /locus_tag="VIS53_08645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767890.1"
                     /translation="MNQKWFLRKHEDGSTFGPVHFDQITRWAAAAQIAPHDTLSSDGQ
                     TWVRAPMVPQLSMDWLVELTSEQYYGPTTLGTLREFIRLGEIDSETVVINSCDGTRRQ
                     VREMPDLWEIEPSEADENQFQIQLGDPVGPGVAKMSTRLQERIRDLEQTLQEERRALA
                     ESQERYNELERKYQDLLLSDLS"
     gene            complement(3922..4389)
                     /locus_tag="VIS53_08650"
     CDS             complement(3922..4389)
                     /locus_tag="VIS53_08650"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HEY5767891.1"
                     /translation="MKVISILCAVSSFAICTAFAESPVPNEGKSAESAQLEALAKKID
                     EQNAKIDALSQEILKLEQQFSHARPGVMIGEPTPAPATAAAPGTSASHSPVEGNAHTV
                     ARGETLTSIAKMYKVTVDDLQKANHIEDGRKLQAGQTITIPTASPAASGSPSP"
     gene            4544..4720
                     /locus_tag="VIS53_08655"
     CDS             4544..4720
                     /locus_tag="VIS53_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like protein UBact"
                     /protein_id="HEY5767892.1"
                     /translation="MPERIQKPAEPAPWGPKQGDGGGPRSPDVSRPDTKDLLKKMRKV
                     DPNQSKRYRQRTGQ"
     gene            4720..5544
                     /locus_tag="VIS53_08660"
     CDS             4720..5544
                     /locus_tag="VIS53_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit alpha"
                     /protein_id="HEY5767893.1"
                     /translation="MDRSQLGFDQNFSGAADDFPSLLRRKGLLGPAAIGSMPQNAAQQ
                     QTWQPIEATTILAFKFSGGVLVAGDRRATAGNTVVYDRADKVLEVDRQSIMAIAGVPA
                     TAWEMARVLEHSLQYFRRTQLQEMSVDGKVRALSKLLRDNFGFVMQGVGVVVPIFATY
                     DGNSKPEARLYFYDAMGAQFEAADYAATGSGSPAVRGILYYENTWGPKRLHKLNEQEA
                     VSLALRALDTAAESDTATAGVDRSGKIYPVIKIVSREGINTLPESKIAAVFKEMVA"
     gene            5651..6430
                     /locus_tag="VIS53_08665"
     CDS             5651..6430
                     /locus_tag="VIS53_08665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767894.1"
                     /translation="MIEEPYRWVEAIANRREYIEGQLAPGSPIAALGYREGILFVTLG
                     QTRQKLFEIYDRIAMGAIGHPGDIERLRMAAIELASTEGFTRSAGDVSLRRLAHYSLS
                     PVMKSAFEQIYGPPYLARMIFAEVGARPDDDLFLRVEYDGEIASNGATYARARQDFAV
                     LSGTRQSVEMMEAFLKNEHKPDASFEMAVKSGLDAWSVGHMLLQASEAKELPARDAIA
                     QHREEQLAIAAIEAAVLERDSSRPLRYRSLTDKELRSIISR"
     gene            6469..7266
                     /locus_tag="VIS53_08670"
     CDS             6469..7266
                     /locus_tag="VIS53_08670"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY5767895.1"
                     /translation="MKRVIRNVLGIAGLLLMIASLVWISFHQEKRPPAYRESKATQPQ
                     TSKPFAVVVLDPGHGGEDSGAMCGGVMEKDLTLDIARRIDRLLDSEGVATLMTRLGDS
                     YVSLAERAAFGNRSKESIFISIHFNEDNKPVASGVETYYATHQINSGSTFASWLPFFS
                     RPPSNSPKPESQSLASFIQEALVARTRSVDRGTQAKQFFVIANVTSPAVLIEGGFITN
                     KDELSKLVSEDYRDQLAAAVADGVLRYREAVSQQKSALAATGQKSAE"
     gene            7293..>7778
                     /locus_tag="VIS53_08675"
     CDS             7293..>7778
                     /locus_tag="VIS53_08675"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY5767896.1"
                     /translation="MKITIAAVIFMGSMMLMRADQLVESVQQALKDEGFYYGEVNGDM
                     NANLTAAIRRYQIRDGLQVTGELNDETLRSLGIKSSGLSRPTTKDPSPTPAAGAVPSE
                     PPLDEMETVSPAPPVQPFNNGPQGQQVFPLTPMGPASSPGTVFADTPFRSAPPGVQRN
                     VI"
BASE COUNT         1692 a         2066 c         2250 g         1770 t
ORIGIN      
        1 aggtgcaggc aactgaaaga atgacaaacc gtttcaacgg ttttgaactc aaatggaagc
       61 cgttggaacg gcttgccggc taccctcgtg atcgcatccg gctgaagcca ggtgttaatg
      121 aaaacagcag aatgataagt catggacgcg gcgcgagcga taaaagcccg cgagcagcga
      181 gcgtagcgca aatgccaagc gtgttggcgt cgcgaatttc attgtcgccg atcatgcgac
      241 caatttcttc gctgttgaat ccgcgacaat cgagaatcga ttcgccttcc tccctgtccg
      301 ggccttctgc gcagggttga actggacggg ccagaaagaa ataaccgcgc tcatctgtaa
      361 accccggtga agaaaaaaaa tagcctaacg aaataagctc gccgttcggg gccaactcgt
      421 agccggtttc ttcgcgaact tcgcgcaaag cggtgtcctt tattttatct tcgctagcat
      481 cgtgatcgtc gatctgacct gatggcattt cccaaatcgc ctgcccgatt gggatccgtt
      541 cctggcgaat aaaaatgatt ttaccatcgg gtgtcatcgg tgcgaccacg accgccggtt
      601 tgcgatgtac gatcgtccaa gaccgcgggt ctggccgggc gggtgtttgc acacgatccg
      661 ttacaacttc aagattccga tcggcgaagc gccgctcgct cgagatcgtt ttccaatcac
      721 cgtctttcat cgagcaattg tagtggccgc tgtcttcagc ggcaaactgt agccgtcgct
      781 ctgtgggcga cgctgatcca ctcctgtaaa aatgctgatg cggcgcttcc cacagggaag
      841 cggctacaac tttgcttgcc aacgcgtgat ttgttttgtg acattctctt tccaccaagt
      901 ccgctgggga caacggacac tacaactggt gctccgtggt tcgtgtcgat tagtctcctt
      961 tgtaatcaac ccacggatgc agttcgggtg acggtgaccg aaacatattt tgcgtcctgc
     1021 aagacgaact ttcggagttc gaccgtcact ttttgaatcg ggaaactctt cagcaaatgc
     1081 cttgccaccc gatctgccag cgtctcgatc aggctaaccg actcagcgcg caaaaaattc
     1141 ttcgtctcct cagccacggt tgaatagttc accgtccgtt cgatgtggtc cgccagatcg
     1201 tttgcctgct gatacggcca aaaggaaatg cttaccgtca atcgttgcgg attcgcgcgt
     1261 tcttcttcgg gaactccgat gcgcgtgaaa acgtcaagct gctcgatatg aatttcgtcc
     1321 ggcgaaaagt gcaattgatt cggcacgcgc aaatcttaac cacgaatcca ccttcgccaa
     1381 tcatggtcta acccattcaa cgcggcgaag ccattcgcgt cattcacggg cttctggtaa
     1441 atttgtcgtg aatgaaaacg gtctggcgcg tatttgcgta tctaaagcgg tatccctggt
     1501 tggctgcagg gacgctcgcg tgcgcgatca tgggcacgtt gatggtcatt gtgtttccga
     1561 gcgtgacgaa atggatcatt gaggacgtgg tgcgcgcgaa tcggccggac aaattgctgc
     1621 cactgatttt gctcgccgcg gcggcttttg ttattcagca cctttttaat tcgctccgga
     1681 tcattttgaa caacacattc gagcagaaag taattttcga tctccgcagc gatttgtatt
     1741 cgcacattca agtgctgccg ctgcggtggt tcgataatcg ggcgacaggc gacctgatga
     1801 cgcgcgtgat cgaagacgtg aacgcggtcg agcgcgtgct gatcgacgga atcgagcaag
     1861 gcgtcgtcgc ggttttacaa atcgtgattg tcgtgacggt gatgttttat tggaacgcaa
     1921 agcttgcatt gcttgcgctg gtgccgttgc cgctgctaat cgctggcgcg ctcgcctaca
     1981 cgctaacggc gcaccggcga tatcgattac agcggcgcgc cgcatcgaat atcaacgcgc
     2041 tgttgcacga taatcttgcc ggggttcgtc agatcaaaag cttcgcgcgc gaacgcgagg
     2101 aacacacgcg tttcaatcgc gccagcgatc aactgcggca cgccaccctg gtggtgatgc
     2161 ggacatgggc catttactcg ccgtcgatgt cgatgttcga agcaatcggc gcgttgctcg
     2221 tgctgggatt tggtagtcac gacgttttga ccggcagcct gcagctgggc gatctgatcg
     2281 ggatcctgat gctcatggca tttctttacg atcccatcag ccgcttgcac cagctgaatc
     2341 agttggtgca ggccggccgc gcggcaggcg aacgtgtgtt tgagattctc gatgaagatg
     2401 ccgagccggg cgttgtagcg aagatcaagt ctgtagagga acctgacagg ttcccccgta
     2461 tcaaacgcga tgacacacgg gaagctgtca gcttccccta caagcctgcg ctgcccatca
     2521 tcggtgacat tcgctacgaa gatgtgagct tcagttacgt cgacgggtta tctgcgcttc
     2581 ggcacatttc atttcacgcg ctgccgggaa ctacgactgc gctggtcggc gcgaccggcg
     2641 cgggaaaatc gacgctggtg aatttgctcg tgcgctttta cgagttcgac tccggccaga
     2701 tttacgtcga tgacaaaccc gtccgagagt acgacctgcg cactttgcgc gaagcgatcg
     2761 gcgtggtgac gcaggaaagc ttccttttca acggatcgat tcgcgaaaat cttttgatgg
     2821 ggaaaccaac agcaagtgac gcggagcttt ggcgcgcggt ggatgccgcg aatgcgcgac
     2881 aattcatcga gcgcttgccg cagggattgg agagcgtggt cggcgagcgc ggcgtgaaat
     2941 tgagcgtggg cgagaaacag cggctctcaa ttgcgcgggc gctgctcaag gatccaccga
     3001 ttttgattct tgatgaagca actgccagcg tggacacggc gacggaacgc ttaatccagg
     3061 aggcgctgga acatttgatg gcgaatcgaa cgtcgattgt gattgcacac cggctttcga
     3121 cgatcgtagg tgcggaccag atcctggtgt tggatcacgg ccacgttgtc gagcgaggct
     3181 cacacgaaga attgctcgtg ctggatcaaa aatacgcgca gctatgccgg cagagtctgt
     3241 tggagtcgtc acctcagcgc gaaggagagc cgcaggagga aattgtcacc ccagaagtcg
     3301 cggaaccgga agaggagcga ttgccggtct aacaacttgg caggcgagtc gcccgagtta
     3361 ggagagatcg ctcagcaaaa ggtcctggta ttttcgctcc agctcgttgt aacgctcctg
     3421 gctctcggca agcgcgcggc gttcttcctg gagcgtttgc tcgaggtcgc gaattcgctc
     3481 ctgaagacgg gtggacattt tcgctacgcc cggtccgaca gggtcgccga gttgaatttg
     3541 gaactggttt tcgtcggcct ctgacggctc gatttcccac aggtcgggca tttcccggac
     3601 ttggcggcgg gtaccgtcac agctgttgat cacgaccgtc tcgctatcga tttcgcccag
     3661 ccgaataaat tcccgcaaag taccgagagt agtcggtcca tagtactgct cgcttgttag
     3721 ctcgacgagc cagtccatgc tcaactgcgg taccatcggc gctctgaccc acgtctggcc
     3781 gtcgctggac agagtgtcgt gcggcgcgat ctgcgccgcg gcagcccaac gcgtgatctg
     3841 gtcgaaatgc accggtccga acgtgcttcc gtcctcgtgt ttgcgaagaa accacttttg
     3901 gttcacgtga gatttcgtct tttacggcga tggcgagcca gaagcggcag gcgatgccgt
     3961 cggaatagtg attgtttggc cggcctgcaa tttacggccg tcctcgatgt gattggcttt
     4021 ctgtaaatcg tccacagtca ctttgtacat tttcgcaatc gaagtgagcg tttcgccgcg
     4081 cgcaacagtg tgcgcgttgc cttcgacggg ggaatgcgat gcagatgtgc cgggagcggc
     4141 agcggttgct ggggcgggtg taggttctcc aatcattaca cctggccgag catgcgagaa
     4201 ttgttgctcc agtttgagaa tctcctgaga aagcgcgtcg atcttggcgt tttgttcgtc
     4261 aatcttcttt gccaaagctt caagttgcgc ggactccgct gattttcctt cgttcggcac
     4321 cgggctctcc gcaaaagcag tgcaaatcgc gaaagagctt actgcgcaca aaatagagat
     4381 tactttcatc tcagtgaaaa tttgccatcg ggacatttat ctgacaagca ggttcgctgc
     4441 gcttaaccgt tgttttgcaa gcgttaacga atccactgta tttgtgtaat gattccgcgc
     4501 ggcgcgtggc ttgcgtttcg aacttttgct cgtacgtttt ttcatgcctg agcgcattca
     4561 aaagccggcg gaaccggctc cgtggggacc taaacaaggc gatggcggtg ggccgcgttc
     4621 gccggacgtt tcacgaccgg acacaaagga tctgttaaag aaaatgcgca aggtcgatcc
     4681 caaccaatcc aagcgctatc gccagcgcac gggtcagtaa tggaccgttc acagttggga
     4741 tttgaccaga acttttctgg tgcagcggat gactttcctt cgctgctccg gcgcaaaggt
     4801 ctgctcggcc cggctgccat tggttcgatg ccgcaaaacg cggcgcaaca gcagacgtgg
     4861 caaccgatcg aggcgacaac gatccttgcg ttcaaatttt ccggtggcgt tctggttgcg
     4921 ggagatcgcc gcgcgactgc gggtaacacg gtcgtctacg atcgtgcgga caaggttttg
     4981 gaagtcgata ggcaatccat aatggccata gccggtgtgc ctgcgaccgc gtgggaaatg
     5041 gcgcgcgtgc tcgagcattc actccaatat tttcggcgaa ctcagctcca ggaaatgagt
     5101 gtcgacggca aagtgcgagc gctctcgaag ttgttgcgag acaatttcgg attcgtcatg
     5161 caaggcgtcg gtgtcgtagt cccgatcttt gcgacttacg acggaaattc gaaacccgag
     5221 gcgcgccttt atttttatga tgcaatgggc gcgcaatttg aagcggccga ttacgcggca
     5281 acggggtccg gctcgccggc ggtccgcggc attctgtatt atgaaaatac ctggggcccg
     5341 aagcggctgc ataagttgaa cgaacaggaa gcagtatcgc tcgccctgcg cgccctcgac
     5401 actgctgcgg aatcggatac ggcgacggcc ggcgtggatc gtagcggaaa gatttatccc
     5461 gtcatcaaga ttgtgtcgcg cgaagggatc aacactttgc ccgagagcaa aatcgctgcc
     5521 gtgttcaaag aaatggttgc atgaggaata tagacttcca gtctgtccgg ccagctccga
     5581 acgcttttgg ggctgaaacg aacaaagcag gacagagcag aggccacaga cctgtgttcc
     5641 gctaccgctc atgatcgaag agccgtatcg ttgggtcgaa gcaatcgcca accggcgcga
     5701 gtacatcgag gggcagctgg cccccggtag tcccatcgcg gcattgggtt accgcgaagg
     5761 cattctgttt gtcacgctcg gtcagacgcg ccagaaactt ttcgagattt acgatcggat
     5821 cgcaatggga gcgattgggc atcctggcga catcgagcgg ttgcgaatgg ccgcgattga
     5881 actggccagc accgaaggct tcactcgctc ggctggggat gtttcactac ggcggctcgc
     5941 gcactattcg ctcagtcctg tcatgaaaag cgcgttcgag cagatctatg ggccgccgta
     6001 tctggcgcgg atgattttcg cggaggtcgg cgcacgtccc gacgatgatt tgtttttgcg
     6061 agtggaatac gacggcgaga ttgcgagcaa tggcgcgacc tacgcgcgag cgcgacaaga
     6121 tttcgccgtg ctgagcggca cgcgccaatc ggtcgaaatg atggaagcgt ttctgaaaaa
     6181 cgagcacaaa ccggatgcca gctttgaaat ggcagtgaag tcggggctcg acgcatggag
     6241 tgtagggcac atgttgttgc aagcgagcga agcaaaagaa ctgcccgcgc gcgacgccat
     6301 cgcgcaacat cgcgaggaac aactcgccat tgctgctatc gaagcagcag tgctggagcg
     6361 cgatagcagc agaccactcc gttatcgttc gttaacagat aaggaattgc gctccatcat
     6421 ttctcggtga ttaaattatg aggagaactt ttctgacggg gaccacaaat gaaacgagtc
     6481 atccgaaatg tgctggggat cgcaggcttg ttgttgatga tcgcctcgct tgtctggatt
     6541 tcgtttcatc aagagaagcg accgccggct tatagagaat caaaggcgac tcagccacag
     6601 acgtccaaac cattcgcagt agtggttctt gatccaggcc atgggggtga agactccggc
     6661 gcaatgtgtg gcggagtcat ggaaaaggat ctgacattgg acattgcgcg ccgcatcgat
     6721 cggctcctgg actccgaagg tgtcgccaca ttgatgacac ggctcgggga cagctatgtc
     6781 tcattggcgg agcgcgcagc gttcgggaat cggtcgaaag aaagcatttt tatcagcatt
     6841 cattttaacg aagacaacaa acctgtcgcg agcggcgtgg aaacttacta tgctacgcat
     6901 cagattaatt caggctctac tttcgcttcg tggttgccgt ttttctcgcg gccgccgtcc
     6961 aattcgccca agcccgaaag ccaaagtctt gccagtttta ttcaggaagc gctggtggcg
     7021 cggacccgct ccgtcgatcg cgggacgcaa gccaaacaat tttttgtgat cgcaaacgtg
     7081 acttctcccg cggtgttgat tgagggcggc tttattacga acaaggacga actttcgaaa
     7141 cttgtcagcg aggattatcg cgaccaattg gcggcagcag ttgccgacgg cgttctgcgg
     7201 tatcgcgaag ccgtgagtca gcagaaatca gcattggcag ccacaggcca gaagagcgct
     7261 gaataggcaa aaaacggcgt cgtcgaatga ccatgaaaat cacaattgct gcggtgatct
     7321 tcatgggatc gatgatgctg atgcgggcgg accaactcgt tgaaagcgtg caacaggctc
     7381 tcaaggatga aggtttctac tacggtgaag tcaacggcga catgaatgcg aatctcactg
     7441 cagcgattcg ccgttatcaa attcgcgatg gcctgcaggt caccggtgaa ctcaacgatg
     7501 agacgctgcg atcgctcggg attaaatctt ctgggttgtc gcgaccaacg accaaggatc
     7561 cgtcaccgac tcctgcagcg ggtgctgtgc caagcgagcc ccctttggac gaaatggaaa
     7621 ccgtgagtcc agctcctccg gttcagcctt tcaataatgg gccacaaggc cagcaggttt
     7681 ttcccttaac tcccatgggt ccggccagtt cgccgggaac agttttcgcc gacacgccat
     7741 ttcggagcgc tcctcccggt gtgcaacgaa atgtgatc
//
LOCUS       DATDAJ010000351        10563 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1978283, whole genome shotgun sequence.
ACCESSION   DATDAJ010000351 DATDAJ010000000
VERSION     DATDAJ010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10563
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1978283"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VIS53_08680"
     CDS             complement(<1..889)
                     /locus_tag="VIS53_08680"
                     /inference="COORDINATES: protein motif:HMM:NF022646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2891 family protein"
                     /protein_id="HEY5767897.1"
                     /translation="MRASLAVALREYNGRAIRWKIRSAIFTKPSSSMIVAAVAFKFHL
                     SLLLKFVCAVVAAPLLCVVAENAAHQASPKPSSGAFDAQAAERFAKLALQCVHKEYPN
                     KISHVLNSDADVAPPRKLTPAFCGCYDWHSSVHGHWLLVRLLRTFPDAPFAKAARDAL
                     KQSLTAENLKTEAAYLRGDGRLSFERPYGLAWLLQLCAELREWEDSQAREMLANLKPL
                     ENAAVERLTTWLPKLSHPIRIGEHNQTAFALGLLLDSARVKNDERLAKLAADSARRFY
                     LADKNCPLAYEPSGEDFLSP"
     gene            907..2070
                     /locus_tag="VIS53_08685"
     CDS             907..2070
                     /locus_tag="VIS53_08685"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY5767898.1"
                     /translation="MNSLDYYKIEELLTDEERAIRDRAAQFVQKEVLSEVVPCHRVAK
                     FPDHLIRRMGALRFYAPYLKEHGCAGVSYTAYGLIMQELERADSGIRSLASVQGALAI
                     QAIHSFGSPEQHARWLPELVSGERVGCFGLTEHEHGSDPGGMETRAKREGDDYILNGS
                     KCWIGNASIAHVKVVWAKDDDGHVGGFVVEKDAPGFRARDIEGKFSLRMSRTSECWFE
                     NCRIPAENRLPNARGLSAPLSCLSYARVGIAWGVIGAAIDCYETALAYAKAREQFGRP
                     IASFQLVQQKLVWMAQEITKAQLLAFRLTRMMEAGSSRPAQISMAKRNNVWMALECAR
                     KARDILGAAGITDQHSVIRHVMNLESVFTYEGTHDIHTLIIGRDITGLNAFGG"
     gene            2202..3434
                     /locus_tag="VIS53_08690"
     CDS             2202..3434
                     /locus_tag="VIS53_08690"
                     /inference="COORDINATES: protein motif:HMM:NF012336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767899.1"
                     /translation="MSESVYILGGGRTDFKRNLKKEGKTIRHVIIEAGKKAIDDAKID
                     PGEIQAGAVGNFNAGQFTKQLQLGAFIPEIDPKLRGIPTMHTEAACASGALSVLLGAE
                     WIIGGFYDVVLVVGAEQQKTMSSLDGSDVLGAAADYHNEKPEYGDFMFPKLFGRIAQI
                     YIEKYGATEADLALVAWKNYAHAKLNPLAQMRDADLTLDSASQVSDKNPHVAPPLKVS
                     DCSQITDGAASVVLVSGRYLDKIGRDKNKTVRLFGYGHTTDYLPLDKKDAPTFSIARK
                     AAEKAFRMGNLTPRDLHGADVHDCFSITEIVAYEILGLAEPGKGVDLVKSGATTLPAV
                     RPEKSKAPFQIPVNAGGGLIGDGHPVGATGVRQVFEAYQQLTEQAGARQIENAKRFLT
                     FNMGGSLTTSVAMLWGRS"
     gene            3471..3857
                     /locus_tag="VIS53_08695"
     CDS             3471..3857
                     /locus_tag="VIS53_08695"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5767900.1"
                     /translation="MKLPFTLGEVGHFGLAVRDPKKSAKWFERALGLRKQFEFENGVA
                     VGNDCVTIALFKGKPSPETIDHMSFHLPNMATLRKALAHLKKVGVDIEDPGEEIGPEA
                     QGSKNMGLWFHDLDGYRWELSVLSGK"
     gene            3968..5212
                     /locus_tag="VIS53_08700"
     CDS             3968..5212
                     /locus_tag="VIS53_08700"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006169.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY5767901.1"
                     /translation="MNSSTVTVAQSNAFITTFDLSPTESGPLDGLRFAVKDTIDVAGF
                     KTGCGNPTWRDSHPAAVVHAVCVEQLLHAGARCVGKTISDELAFSLLGENHFYGTPLN
                     ARAPDRVPGGSSSGSASAVACGLVDFALGTDTGGSIRVPASNCGIWGFRPSHGFVSVA
                     GVNPLAPSFDTVGILAQNADVMAKVAPVVLSSAPASPSKPATIHLIREAFELADADVQ
                     EFLSEPRHRLLEIFGGAARESSLQELVPDDAGHGFTTWVDSFCVIQWAEIESCLGRWI
                     ASARPEFGPEIVASFQLMKQLDRRRVSESLQRREQYFRRLHEFLGPNDLLCIPTTPAL
                     APRKGDPPRRSSSGTGYYPRTLSLTSVAGMGRLPQVSLPIADVAGVPVGLSLLARHGQ
                     DSFLLQVARNVGREIRLPLNEL"
     gene            5323..6528
                     /locus_tag="VIS53_08705"
     CDS             5323..6528
                     /locus_tag="VIS53_08705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HEY5767902.1"
                     /translation="MNTFASENGDGKAFVSHAPGYWPDTAPELWNDWKWQLKNRVTTL
                     TQLEKHLELSAEERSGVLLSGDKLALAVTPHFFNLLPANNPDDPIRRQVIPRIEETWA
                     SPYDMADPCGEDSHMPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRVVSGVGEQEFH
                     TDFEEAFRYLEAHTEVRDVLLSGGDALIFSDDRLEKLLSRLRTIKHIEFLRIGTRVPI
                     FLPQRITPELCAMLAKYHPLWMSVHVNHPRELTIEVKQALERLANAGIPLGNQSVLLA
                     GVNDDIETMKTLVHKLLMCRVRPYYVYQCDLINGSSHLRTSVAKGLEIIEGLRGHTTG
                     YAVPQFVIDAPGGGGKVPINPGYVLYHDNEKIVIRNYEGKIFEYPETGNENLQFAPQR
                     EYHDEYLYS"
     gene            6739..7380
                     /locus_tag="VIS53_08710"
     CDS             6739..7380
                     /locus_tag="VIS53_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767903.1"
                     /translation="MNQRLISEIGRTQRLDIINSLKRTKGMSVNELVEKMGMSYMGIK
                     QHCITLHRDGYLDTWRRPQKMGRPEMVYRLTRRTHDLFHADSHQFTLDLLKAAEDIYG
                     PNAPEKLLYSIFKKKTAALKAKAKGETVAERAKWLAHVRDGEGYMAEFLNNEKDGGPQ
                     ILECHSPLLNVAEQYPIVGRFEQDMFEAVLGTRVRREVNRNSGLYECAFYFSA"
     gene            7480..9456
                     /locus_tag="VIS53_08715"
     CDS             7480..9456
                     /locus_tag="VIS53_08715"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-1,4-glucan--maltose-1-phosphate
                     maltosyltransferase"
                     /protein_id="HEY5767904.1"
                     /translation="MGISVDWWRMARAFPSVVIDNVQPLIDCGHSPIKRIVGEDLVVE
                     ADIFKDGHDVVAAVLKWRVAGKRAWRETPMMFVDNDRWRGVCTLYDQAIHEYTVEAWT
                     DTFRSWQQEFAKKFEGGIADLRSEALEGAAIVKAAASRARDRADSTRLREFAEQIVTG
                     ANSEIYAVAKSGELEVLMATYPDRADATQYEPVPRVVVDRPVAVFAAWYEFFPRSAEG
                     HGDRGSTFRDCLPRVDDAKAMGFDVLYFPPIHPIGETSRKGRNNAVICESGDPGVPWA
                     IGGQAGGHKTVEPSLGTLEDFDWLQQEVRKRGMEIALDFAINCSPDHPYVKEHPEWFY
                     KRPDGTIKFAENPPKKYEDIYPINFRCENWRELWAEMKSIVLFWAERGVRIFRVDNPH
                     TKPVAFWEYLIEGVREKYPDTIFLSEAFTRPKMMKALAKAGFNQSYTYFTWRNSKQEL
                     IDYFTELTQTEMSEYFRPNLWPNTPDILPFVLQEGGRPAFMVRVLMAATLSPLYGIYS
                     GYELCENEALPGREEYLDSEKYQFKKRDWNAPGNIKDWIARINQIRKQNRALQMFTNL
                     RFYPADNDAILFYGKMTPARDNIILVVVNLDPFRKQNSFILVPIEEFGQMESDEYQVH
                     DLLSDARYTWRGRQNYVELDPEIQPAHIFLVHRQ"
     gene            9616..10380
                     /locus_tag="VIS53_08720"
     CDS             9616..10380
                     /locus_tag="VIS53_08720"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY5767905.1"
                     /translation="MKIWVVLFAALGSASPLLAQEPTPPLVPQHSQTVLETLVKAGPV
                     MIPMFLLSIFFVALVVVYFLTIRRGAVVSSGYMATADALLRKRDYLGLLAVSNRHGEA
                     IARVVQKMLDFTTKNPHADLQQVREIAETEGTRVAASLNNRVIYLADIGMIAPLLGLL
                     GTVFGIIRSFGALGSDLGSARYIALSRGISEALVNTAAGLAIGIPAMIFYAFFRGRSQ
                     KLISELEAASTHVLALLSLQYGRRAERSPVLIEDEL"
BASE COUNT         2348 a         2801 c         3049 g         2365 t
ORIGIN      
        1 agggcgaaag aaaatcttca cccgaaggct catacgcgag cggacaattc ttatccgcca
       61 gataaaatct tcgcgctgaa tcagcggcga gtttagctag gcgttcgtca tttttgaccc
      121 gcgcagaatc gagaagcagc ccaagcgcga atgcggtttg attgtgctca ccgatgcgta
      181 ttgggtgcga cagtttcggt agccacgtgg tcaatcgctc gacagctgca ttctcaagcg
      241 gcttcaggtt tgccaacatt tctcgcgcct gcgaatcctc ccattcgcgc aactcggcgc
      301 agagttgcaa aagccacgct aatccgtacg gcctttcgaa actcaagcgg ccgtctcccc
      361 gtagatatgc cgcttcagtc ttcagatttt cagcggtgag actttgcttc aaagcgtcgc
      421 gtgcggcttt tgcgaatggc gcatctggaa acgtgcgtaa caaccgcacc agcagccaat
      481 gtccgtgcac tgacgagtgc caatcgtagc agccgcaaaa cgccggtgtc agtttccgtg
      541 gcggcgcgac atcggcatcg ctattcagaa cgtgactgat cttgttcgga tattccttat
      601 gcacgcactg cagcgccaac tttgcgaaac gttcggcagc ctgagcatca aatgctccgc
      661 tagatggttt cgggcttgcc tgatgagcag cgttttcagc cacaacgcag agcaggggcg
      721 ctgccacaac cgcgcaaaca aacttcaaca aaagtgaaag atgaaatttg aaggccacag
      781 cggccacaat catgctgctg cttggcttcg taaagatcgc tgagcgaatt ttccaacgga
      841 tcgcgcggcc gttgtattcg cgtagcgcaa ccgctaaact ggcgcgcatt agccggatcg
      901 ctcgatatga attcgctcga ttactacaaa atcgaagaac ttctcacgga tgaagagcgc
      961 gcgatccgcg accgggcggc gcagtttgtg cagaaggaag tgttgtccga agtcgttcct
     1021 tgccatcgtg tcgccaaatt tccggaccat ctcattaggc gcatgggcgc gctgcgcttt
     1081 tacgcgccat acctcaaaga gcacggatgc gcaggcgtaa gctacacggc gtatggcctg
     1141 atcatgcagg aactggaacg cgccgattcc gggattcgct cgctggcgtc ggtgcagggc
     1201 gcgctcgcaa ttcaggcgat ccattcattt ggctcgccag agcaacacgc tcgatggttg
     1261 cccgaattgg tgtcgggtga gcgcgtgggt tgcttcgggt taacggaaca tgaacacggc
     1321 tcagacccgg gcgggatgga aacgcgcgcc aaacgcgagg gtgatgatta cattttgaac
     1381 ggcagcaagt gttggatcgg caacgcttct atcgctcacg tcaaagttgt ttgggcgaag
     1441 gatgacgacg gccatgtcgg cggattcgtg gttgagaagg acgcgccggg ctttcgcgcg
     1501 cgcgacatcg aggggaagtt cagtctgcgg atgtcacgaa cgtcggagtg ttggttcgag
     1561 aattgccgga tccctgcgga aaaccgactg ccgaacgctc gcgggcttag cgcgccgtta
     1621 tcatgcctgt cgtatgcccg tgtcggaatt gcgtggggcg tcattggcgc ggcgattgat
     1681 tgctacgaaa cagccctggc ttacgccaaa gcgcgcgaac aattcggccg accaattgcc
     1741 agcttccaac tcgtgcaaca aaaacttgtc tggatggcgc aggaaatcac caaggcgcag
     1801 ttattagcgt tccgtcttac tcgtatgatg gaagcaggct cgtcgcgtcc tgcgcagatt
     1861 tcgatggcga aacgcaacaa tgtctggatg gcgctcgaat gtgcgcgcaa ggcgcgggac
     1921 attcttggcg ctgcaggcat caccgatcaa cactccgtga tccggcacgt catgaatcta
     1981 gagagcgtct tcacgtacga aggcacacac gacattcaca ccttgatcat cggccgcgat
     2041 ataacgggct tgaatgcttt tggcgggtga actgacgaat gtcattccga gcggaacgaa
     2101 gtggagtcga cgaatcccgt tgcgctacgg aaagctaact tctgcgggat ccttcgactg
     2161 cgctcaggat gacgtggcgt ggaaattggt taagctaagg aatgagcgag tctgtttaca
     2221 ttctcggggg cgggcgcacg gattttaagc gcaatctgaa gaaggaaggt aagaccatcc
     2281 ggcacgtcat catcgaggcc ggcaaaaagg cgatcgatga tgccaagatc gatcccggcg
     2341 aaattcaggc gggcgcggtt ggcaatttca acgcgggcca gttcacgaaa caattgcaac
     2401 tcggcgcgtt tattccggag atcgatccga aattgcgcgg catccccaca atgcataccg
     2461 aagcggcctg cgcatctggc gcgctgtcgg tgttgttagg tgcggaatgg atcatcggcg
     2521 ggttttatga tgtcgtgctc gtcgtcgggg cagaacagca gaaaacaatg tcgtcactcg
     2581 atggttctga cgtgcttggt gcggctgccg actatcacaa tgagaagcct gagtacggcg
     2641 attttatgtt cccgaagttg ttcgggcgca tcgcgcagat ttatatcgag aaatatggcg
     2701 cgaccgaagc ggatctggca cttgtggcat ggaaaaatta tgcgcacgcg aaattgaatc
     2761 cgctcgcgca aatgcgcgac gctgatctta ctctcgattc cgcatcgcaa gtttcggata
     2821 agaatccgca tgtggcgccg ccgctcaaag tctctgattg ctcacagatc accgatggcg
     2881 cggcatcggt tgtcctcgtt tccgggagat atctggacaa aatcggccgg gacaaaaaca
     2941 aaactgtccg gctgtttggt tacggtcaca cgactgatta tctaccgctc gacaaaaagg
     3001 atgcaccaac gttttcgatt gcgcgcaaag ctgcggagaa agcttttcga atggggaacc
     3061 tgacgccgcg cgatctccac ggcgccgacg ttcacgattg tttttcgatc acagaaattg
     3121 tcgcgtacga aattctcgga ctcgccgagc cgggcaaggg cgtcgacctt gtgaaaagcg
     3181 gggcgacaac gctgccggcg gtgcgtccgg aaaaatccaa agcaccgttc caaattccag
     3241 tgaatgctgg cggcggtctg atcggtgatg gtcatcctgt cggcgcgacc ggtgttcgcc
     3301 aagtgttcga agcctatcaa cagctgaccg aacaagccgg cgcgcgccag atcgaaaacg
     3361 ccaaacggtt cctcaccttc aacatgggtg ggagcctaac gacttccgtc gcaatgctct
     3421 ggggccggag ttaaggttcc gagcgatcgg ctacgggctt ggcgatccag atgaagcttc
     3481 catttactct tggcgaagtc ggccactttg gcctggctgt acgcgatccg aagaagagcg
     3541 cgaagtggtt cgagcgcgct ttgggtctgc ggaaacaatt cgaattcgaa aacggcgtgg
     3601 cggttggaaa cgactgcgtc acgatcgcgt tgtttaaagg aaagccgtcg ccggaaacga
     3661 ttgatcacat gtcatttcat ctacccaaca tggcgacgct gcgaaaggcg ctcgctcatt
     3721 tgaagaaggt cggcgtcgat attgaagatc cgggcgagga aatcggtccg gaagcccagg
     3781 gctcgaaaaa catgggactg tggttccatg atctcgatgg ctatcgctgg gagttaagcg
     3841 tgctcagcgg aaaatagtgc tccgagagtg acggcttcca agccgtcatt tttctttcga
     3901 acggctggga agtcgtcatt gcttaaagag tgatcgcgga ttgttcacgt tgcgtcaaag
     3961 tcagcgaatg aacagctcca cggtcaccgt tgctcagagt aacgccttta taacgacttt
     4021 cgatctgtcg ccaaccgaga gcggtccact ggatggactg cgctttgctg ttaaagacac
     4081 aatcgatgtg gccggtttca aaaccggttg cggtaatccg acgtggcgcg attcccatcc
     4141 tgccgcggtg gttcacgctg tgtgtgtaga gcaactcttg cacgcgggtg cccgttgcgt
     4201 tgggaaaacg atttcggacg agttggcttt cagtcttctg ggtgagaatc acttttacgg
     4261 cacgcctctc aacgcgcgag cgccggatcg cgtgccgggt ggatcgtcga gcggatccgc
     4321 ttcggccgtt gcgtgcgggt tagtggattt tgcgttggga acggatacgg gcggctccat
     4381 ccgggttcca gcgagcaatt gcggaatctg gggcttccgg ccgtcgcacg gcttcgtatc
     4441 ggttgccggc gtgaatccgc tagcgccatc gttcgacacc gtcggcatcc tcgcgcagaa
     4501 cgctgatgta atggcaaagg tggcacccgt tgtgttgtcc tcggcgccgg cgtctccaag
     4561 taaaccagcg acgattcatt tgatccgaga ggctttcgaa cttgccgacg ccgacgttca
     4621 ggaattttta tccgagccgc ggcatcggct actcgaaata ttcggtggcg ccgcgcggga
     4681 gtcatctctg caagagctgg tccctgatga cgctggacat ggcttcacga catgggtcga
     4741 cagtttttgc gtgatccaat gggcggagat cgagagttgc cttggcaggt ggatcgctag
     4801 cgccaggccg gagtttggac ccgagatagt tgcgagtttt cagctgatga agcaactcga
     4861 ccggcgacgc gtctcggaga gcttgcaacg acgcgaacaa tatttccgac gtttgcacga
     4921 gtttctcggg ccaaacgacc tgctgtgcat cccaacaaca cccgcgctcg ctcctcgtaa
     4981 gggcgatcca cccagacgca gttcgagtgg aaccggctat tatcctcgca cattgtcgct
     5041 gacgagcgtt gcggggatgg gccgtctacc gcaagtgtcg ctcccaatag ctgacgtcgc
     5101 cggggtacca gtcgggttgt cgttactcgc gaggcatgga caggactcat tcttgttgca
     5161 agtggcaagg aatgttggtc gagaaatacg tctgccgttg aacgagttgt agacggcgcg
     5221 gttacgcggc ccgcgcatgg ttcatgcacg tgcgtagcgc acggccaagt gcctgcattg
     5281 acacgatatt taagggcctt aactttttcg tccaccacaa aaatgaatac ttttgcctct
     5341 gaaaatgggg atggaaaagc tttcgtttca cacgcgccag ggtattggcc agacacggct
     5401 ccggaactct ggaacgattg gaaatggcag ctcaaaaaca gagttaccac cctcacgcaa
     5461 ctcgagaaac atctggaact gagcgccgag gaacgcagcg gcgttttgct gtccggcgac
     5521 aaacttgcgc tggccgtcac cccacacttt tttaacctgc tgccagcaaa caatccggat
     5581 gacccgatca ggcgtcaggt cattccgcga atcgaggaaa cgtgggcgtc gccttacgac
     5641 atggctgacc cttgcggcga agattcgcac atgccggtgc ccggtttagt gcatcggtat
     5701 ccggatcgcg ttttgtttct ggtgacggat cgttgtgcga gttactgccg ttattgcacg
     5761 cggagtcgag tagttagcgg agttggcgaa caggaatttc acaccgattt cgaggaggcg
     5821 ttccgttatc tcgaagcaca cacagaagta cgcgatgtgc ttcttagcgg cggagacgcg
     5881 ttgattttca gcgatgacag gctcgagaag cttttgtcga ggttgcgtac catcaagcat
     5941 atcgaattct tgcggatcgg tacgcgggtg ccgatttttc tgccacaacg aatcacgccc
     6001 gagttgtgtg caatgctggc aaaatatcat ccgctctgga tgagcgtgca cgtgaatcac
     6061 ccgcgcgaac ttaccatcga ggtaaaacag gcgttggaac gtctcgccaa cgcgggcatt
     6121 cccttgggca accagagtgt gttactcgca ggcgtgaatg atgacatcga gaccatgaag
     6181 actctcgtgc ataagctgct gatgtgtcgc gtccgcccct attacgtcta ccaatgcgac
     6241 ctgatcaatg gctcctcaca cctgcgcacg tcggttgcca aaggcctcga gatcattgag
     6301 ggactgcgcg ggcacaccac tggttacgct gtgccccaat tcgtcatcga tgctcctggc
     6361 ggtgggggga aagtgccgat caaccccggt tatgtcctgt atcacgacaa cgaaaaaatc
     6421 gtgatccgga attacgaagg gaaaatcttc gagtatcccg agaccggcaa cgagaacctg
     6481 cagttcgcgc cgcagcgcga gtaccacgac gagtatctct actcgtaagt ggtgattccg
     6541 agcaatctct gaatccctgg caaaagcatc tcgcccttcc cgtagctgct gtttgcgccg
     6601 cgtcgtcaca ggacacttgt ttcgtgtttt ctttcaccgt cgactgttgt gtaaaatttg
     6661 tgtaaatttt acacttgcgt attaaatatt gcggcgtgta aagtccggca ctttcgttct
     6721 cccaaccatt tcagctgtat gaatcaacgt ttaatttcgg aaattggccg cacccaacgg
     6781 cttgacatta tcaactccct caagcgcacc aagggcatgt cggtcaacga gctcgtggaa
     6841 aaaatgggta tgagctatat gggcatcaaa cagcattgca ttacgctgca tcgcgacggc
     6901 tatctggata cctggcgacg accgcaaaaa atgggcagac cggaaatggt ctatcgcctg
     6961 acgcgccgca cgcatgatct ttttcatgcc gacagccacc agttcacgct ggacttattg
     7021 aaagcagcgg aggacatcta cggaccgaac gcgccggaga agttacttta cagcattttc
     7081 aaaaagaaga ccgcggcgct gaaagccaag gcgaagggag aaaccgtcgc ggaacgcgcg
     7141 aagtggcttg cacatgtccg cgacggcgaa ggctacatgg ctgagttcct gaacaacgag
     7201 aaagacggcg gtccccaaat tcttgagtgt cattctcccc ttctcaacgt ggcggagcag
     7261 tacccgatcg tcggcaggtt cgagcaggac atgttcgaag ccgtcttagg aacgcgtgtt
     7321 cgccgcgaag tgaatcgcaa ctcaggtctg tacgagtgtg cgttttactt ttcggcgtaa
     7381 ctaagtcgcg gcaatagctc cggcttcagc tgaacgctgc gccgtcgcgc agccaggtcg
     7441 ccgtgccatc ggcgaataat cggattatcc tttcgctcga tgggaatctc ggttgattgg
     7501 tggcgcatgg cccgggcgtt tccatcggtg gtgatcgaca acgtgcagcc gctgattgat
     7561 tgtggccatt cccccatcaa gcgcatcgtg ggcgaagatc tcgtagtcga agctgacatt
     7621 tttaaggatg gccacgacgt cgttgcggcg gttctgaagt ggcgtgttgc tggcaagagg
     7681 gcgtggcggg aaacgccgat gatgtttgtt gataacgatc gctggcgcgg cgtgtgcacc
     7741 ctctacgatc aggccattca cgaatacaca gtcgaagcat ggacagacac gttccgcagc
     7801 tggcagcaag agttcgcaaa gaaatttgaa ggtgggatcg ccgatctgcg aagcgaagcg
     7861 ttggaaggcg cggcaattgt gaaagcggca gcaagccgtg cgcgtgatcg agcggactcc
     7921 acgcgcttac gcgaatttgc cgagcaaatc gtcaccggcg ccaattcaga aatttacgca
     7981 gtcgcgaagt caggcgagct ggaagtactt atggcgacct accccgatcg cgcggacgcc
     8041 acgcaatacg agccggttcc ccgcgtcgta gttgatcggc cggtagcagt gttcgccgcg
     8101 tggtatgaat ttttcccgcg ctcagcagag ggccacggag accgcggatc aacctttcgg
     8161 gattgcttgc cgcgcgtgga cgacgcaaag gcaatggggt tcgacgttct ttattttccg
     8221 ccgattcatc cgatcggtga gactagtcgc aagggtcgca ataacgcggt catttgcgaa
     8281 tcaggcgatc cgggagtgcc atgggcgatt ggcggccagg ccggcggaca taaaacggtg
     8341 gaaccttcgt taggcacact tgaggatttt gattggctgc aacaggaagt gcgcaaacgc
     8401 ggaatggaaa tcgctctgga tttcgcgatt aattgctcgc ctgatcatcc gtacgtcaag
     8461 gaacatcctg agtggtttta caaaaggccg gacggcacga tcaaattcgc ggagaacccg
     8521 ccgaaaaaat acgaagacat ttatccgata aactttcgat gcgaaaactg gcgcgagctc
     8581 tgggccgaga tgaagagcat cgtgctgttt tgggccgagc gcggtgtgcg gatctttcgc
     8641 gtggacaatc cgcatacgaa gccggtcgcc ttttgggagt atttgatcga aggcgttcgc
     8701 gagaaatatc ctgacacgat ttttctctcc gaagcgttca caaggccaaa gatgatgaaa
     8761 gcgctggcca aggcagggtt taaccagagt tatacgtatt tcacctggcg aaattctaag
     8821 caggagctga tcgactattt cacggagctt acgcagactg aaatgagcga atattttcgg
     8881 cctaatctct ggccgaacac gcccgacatc ctcccgtttg tgcttcaaga gggcggccgc
     8941 cctgcgttca tggttcgcgt gctcatggca gcgacgcttt cgccgcttta cggaatctac
     9001 agtggatacg agctgtgcga gaacgaggcg ttgccgggtc gtgaggagta tctcgattct
     9061 gagaagtacc aattcaagaa gcgcgattgg aatgcgcccg gaaacatcaa ggattggatc
     9121 gcgcgcataa accaaatccg gaagcagaat cgcgcccttc agatgttcac gaacctgcgt
     9181 ttctatcccg ccgataacga cgcaattttg ttctacggca agatgacccc cgcgcgggac
     9241 aacatcatcc tcgtggtggt gaatctcgac ccctttcgca agcaaaattc atttatcctt
     9301 gttccaattg aggaatttgg gcagatggaa agcgatgagt atcaggtgca cgatttgtta
     9361 agcgatgcgc gttacacctg gcgcggccgg caaaattacg ttgaactgga tcccgaaatt
     9421 caacccgcac acatttttct cgtccaccgc cagtgacgag ttcgcagcaa agtcgactgt
     9481 caccggccca aggaggagca attaacaagc gaatgtatga acaatttgct gaaaattacc
     9541 tctaatcctc aacgctggcc ctgggaccca tttgcatcga tgtttcgctc cgcatatcat
     9601 tacaaaattt ccggcatgaa gatttgggtt gtgctctttg ccgcgctggg gagcgcgtcg
     9661 cctctgctcg cgcaggaacc cacgccgccg ctggtcccgc agcactcaca gacggtgctg
     9721 gagaccctcg tcaaagcggg tccggtgatg attccgatgt ttttgttgtc aatttttttc
     9781 gtcgcgcttg tggtcgttta cttcctgacg atccggcgcg gagcggttgt ttcgagcggt
     9841 tacatggcga ctgccgatgc gctcctacgt aaacgcgatt atctcgggct gctggctgtt
     9901 tccaaccggc atggagaagc gatcgcgcgc gtcgtgcaaa aaatgctcga tttcacaacc
     9961 aagaatccac acgcggattt gcagcaggtc cgcgaaatcg ccgagacaga gggaacacgc
    10021 gtggccgcca gtttgaacaa ccgcgtgatt tacctggcag atatcgggat gattgcgcca
    10081 ctgctgggtc tgctgggcac cgtttttgga atcattcgtt ccttcggtgc gttaggttct
    10141 gatctcgggt cggcgcgtta catagcgctc tcgcgcggga ttagcgaagc gctcgtcaac
    10201 accgctgcgg gcctggcgat cggtattccg gccatgattt tttacgcctt cttccgcggc
    10261 aggtcgcaga agttgatctc ggaactcgag gctgcttcca cgcacgttct ggcattgctt
    10321 tcattgcaat acggcagacg tgcggaacgg tcacctgttt taattgaaga cgagctctaa
    10381 aattcgattg ctctcatgaa tctacgcggt cgtgcgcctt tgcatcatcc cggcattcag
    10441 cttgcgccgc tcgtcgatgt gttgctgctt cttctaattt ttttcctgct cacatggaat
    10501 gcagcgcgca ctgagaacga gctcgacgtg aaagtgccaa aggcctcggc ggcgaaggag
    10561 aag
//
LOCUS       DATDAJ010000352         4346 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1990560, whole genome shotgun sequence.
ACCESSION   DATDAJ010000352 DATDAJ010000000
VERSION     DATDAJ010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4346
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1990560"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..498)
                     /locus_tag="VIS53_08725"
     CDS             complement(<1..498)
                     /locus_tag="VIS53_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767906.1"
                     /translation="MFSFTESPRLTEFERQVLPHLDAAYNLARFLMRNDQNAEDVVQE
                     AALRAFRFFDSFRGENSRAWFLSIVRNTAFTALKRNRMDEETVVFDEELHGGQIPPLD
                     AGIALDRAQERQTVRAAIEQLPAEFREAITLRELEGMSYKEIADVAGVPIGTIMSRLA
                     RARRQL"
     gene            627..1577
                     /locus_tag="VIS53_08730"
     CDS             627..1577
                     /locus_tag="VIS53_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5767907.1"
                     /translation="MNNNNYILHNDNPDGIDRRGFLKCMAWAGTGVLWTMSGGVLTSK
                     LLGATARLIGGDFSFVQISDSHIGFNKDANKDVIGTLQKAMAKINALPAPPDFVLHTG
                     DLSHLSEAEEFDALEQNLKSLKTGEIFYVPGEHDVISDNGALYRERFAKKSLGSGWYS
                     FDKKGVHFIGLNNVLNIREGGLGIIGGEQLDWLKKDLQPLSSSTPIVVFAHIPLWAVY
                     PQWGWGTDDAEQALGFLRRFGSVTVLNGHIHQVVKKVEGNITFHTAMSTAFPQPAPGT
                     APKPGPMKVEAERLSSVLGITDVNYVEGNHTLAVVDSTLA"
     gene            1601..2023
                     /locus_tag="VIS53_08735"
     CDS             1601..2023
                     /locus_tag="VIS53_08735"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEY5767908.1"
                     /translation="MNSLFWERAHGGFTHLPIALIFAAAFFDALAFFCRRSQKRGEFK
                     ALGYWLVIVGALGSLGAVFSGLVLSKGTIGGTGAVLRHHYFVWPAFTLIVGLATWRFL
                     VGRDPSRRAFTLYLATMLLGCSLMGAAGFFGGEMLLGH"
     gene            2039..2440
                     /locus_tag="VIS53_08740"
     CDS             2039..2440
                     /locus_tag="VIS53_08740"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY5767909.1"
                     /translation="MKNWSEGKAFLAAICASGTALIGMFGVATAVRQGQSSISIPTFA
                     ASAQAAVKPPELTADAAQGRHLFLMNCAHCHGDDAQGDEGPDLHNLHRSDGRIHEVIT
                     AGIKGEMPSFGKKLGDPDVRQLIAYLRTLHG"
     gene            2520..3704
                     /locus_tag="VIS53_08745"
     CDS             2520..3704
                     /locus_tag="VIS53_08745"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY5767910.1"
                     /translation="MHKTHELRLATRMARLGTETAFEVLVKAKALEAQGRDIIHLEIG
                     EPDFDTPSNIIEAGCDALRKGFTHYGPSAGMMELREVIAQHVSETRRVNVTPDEVVVV
                     PGGKPIIFFSILALAEDGDEIIYPNPGFPIYESMINYVAAKAVPIRLREELDFRLDLD
                     ELATLINDRTKLIILNSPQNPTGGLLTQDDIAAIARAIGDRNIMVLSDEIYSQLIFEG
                     EDHSIMSIDGMKERTILLDGFSKTYAMTGWRMGYGVMRADLATHISRLMTNSNSCTAS
                     FTQVAGIEALRGPQDVVDDMRAKFKKRRDVMVAGLNKIKGFSCRVPHGAFYVFPNITK
                     TGWRSKKLADALLDDAGVAALSGTAFGDFGEGYLRFSVANSIENIQKALDRIDAWTKK
                     NL"
     gene            4014..4316
                     /locus_tag="VIS53_08750"
     CDS             4014..4316
                     /locus_tag="VIS53_08750"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY5767911.1"
                     /translation="MKTIISVIVTIIIASSGAAFGADAAALWAQNCASCHGKDGSGNT
                     TMGKKLAVKDYSKDQGFSDAEATNVIKNGKGKMKAYKQLSDADVKALVAYVRSLKK"
BASE COUNT         1027 a         1170 c         1210 g          939 t
ORIGIN      
        1 cagctggcga cgcgcacgcg ccagacgcga catgatggtt ccgatcggaa caccggccac
       61 gtccgcaatt tctttgtacg acattccttc aagttcgcgc agggtaattg cttcccggaa
      121 ttctgccggc aattgttcga ttgcagcgcg cactgtttgg cgttcttggg cgcgatcgag
      181 cgcgatgcca gcatccagcg gcggtatctg gccaccgtgc aattcctcat caaacacgac
      241 tgtttcttca tccatacgat tgcgcttgag agcagtgaat gcggtgttgc ggacaatact
      301 taggaaccat gcccggctgt tttcgccccg aaaactgtcg aagaatcgaa acgcgcgtag
      361 tgcagcttcc tgcacaacgt cctcggcatt ctgatcgttg cgcatgagga atcgcgccag
      421 gttgtaagcc gcgtccagat gcggcaggac ctgccgctcg aactcggtca ggcgagggga
      481 ctcggtaaaa ctgaacacgt gtcgttactt tcaatcatta agcacaagac tgccaaagcc
      541 tgatttttat tcccgctgcc agaattttgt cccgatcggg aataacgccg cctgtcgcgt
      601 agtcatcgcg gtcagaaagg gaaatcatga acaacaacaa ttacatttta cataacgaca
      661 atcccgatgg catcgatcgc cgcggattcc tcaaatgcat ggcgtgggct ggcactggag
      721 tgctttggac gatgagcggc ggagttctca cgtcaaagct gctcggtgcg acggctcggc
      781 tgataggcgg ggatttcagc tttgtgcaaa tcagcgacag ccacatcgga tttaacaaag
      841 acgcgaataa ggatgtcatc gggacgttgc aaaaagcgat ggcgaagatc aacgcgttgc
      901 cggctccacc agacttcgtc ctgcacacag gtgacttgag ccatctttcc gaagcggaag
      961 aattcgacgc gcttgaacag aatctgaaga gcctaaagac aggtgaaata ttttacgtgc
     1021 ccggcgagca cgacgtgatc agcgacaacg gcgcgctcta tcgtgagcgt tttgcaaaga
     1081 aatcactcgg gtcgggctgg tacagcttcg acaaaaaagg cgtgcacttc atcggcctta
     1141 acaatgtgct gaatattcgc gaaggcggcc tcggtatcat cggcggcgaa cagctcgact
     1201 ggctaaagaa agacttgcag ccgctctcat caagcacgcc gatcgtagta ttcgcgcaca
     1261 ttccgctgtg ggcggtctat ccgcaatggg gctggggaac agatgacgcc gagcaagcgc
     1321 tcgggtttct gagacggttc ggatccgtca cagtgctgaa cggccacatt catcaggtcg
     1381 tgaaaaaagt ggagggaaac atcacttttc acacagcaat gtcgacggcg tttccgcaac
     1441 ctgcgcctgg aaccgcgcca aaaccgggcc cgatgaaggt cgaagcggag cgactcagtt
     1501 ccgtgcttgg cattactgac gtcaactacg tcgaaggtaa tcacacgctc gcggtagtgg
     1561 acagcacact cgcgtaactg cctaacgaga tctattcatc atgaactcgc ttttttggga
     1621 acgcgcccat ggtggcttca cgcacttgcc gatcgcactg atattcgccg ctgcgttttt
     1681 cgacgcgctg gcattctttt gccgccgctc tcaaaagcgg ggcgagttca aggcacttgg
     1741 ttattggctc gtgattgttg gcgcgctcgg ttccttgggc gcagtgtttt caggattggt
     1801 gttaagcaaa gggacgatcg gcgggactgg tgcggttttg cggcatcatt attttgtctg
     1861 gccagcgttc acactgattg tcggactcgc gacatggcgc tttctcgttg gccgcgatcc
     1921 ctcgcgccgc gcgttcacgc tctatctcgc caccatgttg ctcggctgtt cgttaatggg
     1981 cgcagccggg tttttcggcg gcgaaatgtt actgggccat tgagctgagg gcaaaccaat
     2041 gaagaactgg agcgaaggta aagctttcct cgcggcgatc tgcgcctcgg gtactgcgct
     2101 catcggcatg ttcggagttg caacggccgt acgacaggga cagtcctcga tttcgattcc
     2161 tacgtttgcg gccagcgctc aagctgcggt gaagccgccc gagcttacgg ccgatgcggc
     2221 gcagggccgg catttgtttc tgatgaactg cgcgcactgc catggagacg atgcgcaagg
     2281 cgacgagggg cccgatttac ataacctgca cagaagcgac ggccggattc atgaggtaat
     2341 taccgcagga atcaaaggcg agatgccatc tttcgggaag aagctgggcg acccagacgt
     2401 acggcaacta attgcgtacc tgcggacatt acacggctga aatcgcaaat cgaagtttgg
     2461 tgccaatctt gtcgcagaag acaagttctg ccggtgcggt atagtgccga tctcacccca
     2521 tgcataagac acatgaactc cgcctcgcca cgcgcatggc ccgactcggc acggagaccg
     2581 cattcgaagt gctggtgaaa gccaaagcgc tcgaggcaca gggccgcgac attattcatc
     2641 tggaaatcgg cgaacctgat ttcgatacac ccagtaacat catcgaggca ggatgcgacg
     2701 ccctacggaa aggcttcaca cattatggac cttcagccgg catgatggaa ttgcgcgagg
     2761 tcatcgcaca acacgtgagc gagacgcgcc gggtaaacgt gacaccagac gaagtggtcg
     2821 tcgttcccgg cggcaagccg atcatctttt tttcaattct ggcgctcgcc gaagacggcg
     2881 atgaaatcat ttacccgaat cctggcttcc cgatttacga gtcgatgatc aactacgtcg
     2941 ccgcgaaagc ggtgccgatc cggttgcgcg aggaattgga ttttcggctc gacctcgacg
     3001 agctcgccac tctgatcaac gatcgcacaa agctgatcat cctgaattcg ccgcagaacc
     3061 caactggcgg cctgctgaca caggacgata tcgcagcgat cgctcgtgcg atcggcgatc
     3121 gcaacatcat ggttctgagc gatgagatct atagccagct catctttgaa ggcgaggatc
     3181 attccatcat gtcgatcgac ggcatgaagg agcgcacgat tttgctcgac ggcttttcca
     3241 agacttatgc aatgactggt tggcgaatgg gctacggcgt catgcgcgcg gatctcgcga
     3301 cgcatatttc gcgcttaatg acgaattcga attcgtgcac tgccagtttt acacaagtcg
     3361 ccggcatcga agcgctccgc ggaccgcagg acgtggtgga cgacatgcgg gctaaattca
     3421 aaaaacggcg agacgtgatg gttgcaggcc tgaacaagat caaaggtttc tcgtgtcgcg
     3481 tcccgcatgg tgcgttctat gtcttcccaa atatcacgaa gactgggtgg cgatcgaaaa
     3541 agctggccga cgcgctcctc gacgatgcag gcgtcgctgc attgtccggc accgcgttcg
     3601 gcgacttcgg cgagggctat cttcgcttca gcgtggcgaa ctcgatcgag aacatccaga
     3661 aagcgctcga tcgcatcgac gcctggacaa agaagaatct gtagctgtag cgtccgctgt
     3721 cctcagcgga ttccagaacg ttcttcacca cgacagtgat agccaatcga atggtacttt
     3781 cgctgcatac gaaaacggat tcactcttct cgagctaaca cgaaaacatt atggcgaagc
     3841 cgggttggat tcgcgcaagc tggatttcct cgaacgatag cgaacggcga attttggtct
     3901 tgtggacaca ctcgctatct atgtaccgtt cgaaactaaa tgggattgac tcaccgagcc
     3961 gaacgctgaa cgccattacc gaaaaataaa acaacgaaag gaacccaaga ttaatgaaaa
     4021 caatcatctc cgtaattgtg acaatcatca tcgcttcttc tggcgcggcg tttggggcag
     4081 atgcagcagc gttatgggct cagaactgtg cctcctgcca cggcaaagac ggcagcggca
     4141 ataccacgat gggaaaaaag ctcgctgtga aagattacag caaagaccag ggcttcagtg
     4201 acgccgaagc gacgaacgtc attaagaatg gcaagggcaa aatgaaagct tataaacagc
     4261 tgtccgatgc cgatgtaaaa gcattggttg cctacgtccg ttcgttgaag aaataatgcc
     4321 gcaaattttc agcgcctgtt tctcag
//
LOCUS       DATDAJ010000353        10461 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1993813, whole genome shotgun sequence.
ACCESSION   DATDAJ010000353 DATDAJ010000000
VERSION     DATDAJ010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10461
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993813"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..1022)
                     /locus_tag="VIS53_08755"
     CDS             complement(207..1022)
                     /locus_tag="VIS53_08755"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEY5767912.1"
                     /translation="MKPEETKILAGFHKPILADPRQRQEQQREQPAQTKYSNDIREWF
                     RPKTRKAAQELYPDMRIRATEPKGTVITVGEGRGFVVEHRGEHLVVTASHCLPWLPSG
                     FGIAYSEEHVYRKMLGPLGSAPTVACECLFINPIADVAVVGVPDTQTYSDEADGYRAL
                     LEYATPFRITEAPEKARGFLLSLEGEWFGCQVQWMERIDGPLWVSKPAQPIEGGMSGS
                     PIVSETGNAIGIVAASVMENERDAATDESGASNPRLMRDLPLWLLRTQTVQKQ"
     gene            complement(1119..1191)
                     /locus_tag="VIS53_08760"
     tRNA            complement(1119..1191)
                     /locus_tag="VIS53_08760"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1156..1158),aa:Lys,seq:ttt)
     gene            1345..1989
                     /locus_tag="VIS53_08765"
     CDS             1345..1989
                     /locus_tag="VIS53_08765"
                     /inference="COORDINATES: protein motif:HMM:NF015527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase family 2 domain-containing
                     protein"
                     /protein_id="HEY5767913.1"
                     /translation="MISHKHKCIFVEVPKTGSTSVRAILGKAWKPHLNLWQIKQLMET
                     SWTEFGGRKNRIIAALYLLQPEERRRETGRKQFESYFKFGFVRNPWDRVVSLYERTEA
                     LQLRNEMSFEQFVDWIQYSSTTCVHSAPHRYQLDWFVDANGNLLADFIGRFERLDEDW
                     AFVAQKLGLEEKLPHRRENPRGRHYTEYYTPRTRDIVAAKFKVDIDRFGYEFAG"
     gene            1973..2710
                     /locus_tag="VIS53_08770"
     CDS             1973..2710
                     /locus_tag="VIS53_08770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767914.1"
                     /translation="MSSPDKIKAIVLTCDRFRAITRHLILKYERLWPDHPFVFHVPYQ
                     ELRGTDTDRVKYHAAPEDIKGTILHLLADIDDEEWIYWCVDDKYPIQLPTDKVSSLIS
                     HAMRSPGIDGLLFCRCRALLSIPRLTLHPHKVKNLFGDVYLERKGWWQIWIHQIMRAK
                     VLRHLFKHLPDHIPNAKTMDDLKDDIPKLPEHRLFVTEKNYAVFGESTRRGMITQNCY
                     ESIVDSGIELPEWFQQPDGEYVTLGKL"
     gene            2718..3410
                     /locus_tag="VIS53_08775"
     CDS             2718..3410
                     /locus_tag="VIS53_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine diphosphorylase"
                     /protein_id="HEY5767915.1"
                     /translation="MRRILKMFAPAEFLDLEHTAHPKLFENQNYVWDALKPIASYLQF
                     RLKPAIFGELTGKPFISNRVFVGRGTVVEQGAVLKGPAWIGENCQIRSGCYVRENVIA
                     GNGVVMGNSCEFKNCILFDEVQVPHFNYVGDSILGHHAHLGAGVILSNVKLNHGEIAV
                     STPDGDIPTGLRKFGAIIGDRAEIGCNSVINPGSVIGRDCVIYPTVNFRGFLPHGSRV
                     KLRQELQVIGKR"
     gene            3733..3906
                     /locus_tag="VIS53_08780"
     CDS             3733..3906
                     /locus_tag="VIS53_08780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767916.1"
                     /translation="MLQLLLREESLSPQGVALIRMLQRSIKEEVRAIHELLSIIETFI
                     QEPTQADSEAEQR"
     gene            4067..5476
                     /locus_tag="VIS53_08785"
     CDS             4067..5476
                     /locus_tag="VIS53_08785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767917.1"
                     /translation="MKYRIFTYSGDALPIAHKLQQEGREVVVGMVHDKAAIHSVKEGE
                     VRPENPEAKRRRLALFDGLIEKRPANLLIEEMRGYEDPEDYFVFFDRNHLFQFSDQIA
                     GMPFYGNFPTEADYLFERNRDQAKQLVREHYPRLQVPDVKAFDDVLEALEFLKSTEQL
                     WVLKGQDDSVKTFVPDVDDPKLAARQIIETLKENKAAYDCSGFILEELINPAIEITPE
                     KIYYDGVPLAVVLEFENKPFGSGNISIQTGCSQNLLFPIAMGDKINSIAFPPVVDAMA
                     KQHKGLFYWDASLLIDKRTGKIYFGEFCSNRPGYNSLFTELAQCSSVDHYFSSVVRKE
                     SPFKLGTVATSVLLLNPATDEETGRTTEGLRVDYKPEIEQNLWLWDVRREGNRLVTVG
                     DDWNLGVISGSGDSIDQAVNSMYKSVDGFSFAGAYYRPKSDFLSLDYPTSILNRVNYG
                     LEKKLYQLPFNVRVAHIKK"
     gene            complement(5466..6251)
                     /locus_tag="VIS53_08790"
     CDS             complement(5466..6251)
                     /locus_tag="VIS53_08790"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY5767918.1"
                     /translation="MVVDCHTHLDDDGAADKLLRSMDEAGIDASIVIAETLPGDISNV
                     AQVLEAVRRSDRLWAIINCVFSKTVELKYVEELTQLLHEDRVVGLKFYLGYEEYSADD
                     ERLHQLYEYCEKHDVPIMFHTGVLETGSTGLLEYSHPLQVDRVATRFPNLTIVMAHMG
                     NPWLIDCAAVLAKNQNVYADMSAFFAENRSITAHDVEVFKQRMEQVRVFLYSYEKFLF
                     GTDYPLYSQKDYLGAVEALEMEQAEHEAVMHANAERLFGVTTS"
     gene            complement(6323..6407)
                     /locus_tag="VIS53_08795"
     tRNA            complement(6323..6407)
                     /locus_tag="VIS53_08795"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6371..6373),aa:Ser,seq:gga)
     gene            complement(6583..7398)
                     /gene="hemQ"
                     /locus_tag="VIS53_08800"
     CDS             complement(6583..7398)
                     /gene="hemQ"
                     /locus_tag="VIS53_08800"
                     /EC_number="1.3.98.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006785 - heme B biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide-dependent heme synthase"
                     /protein_id="HEY5767919.1"
                     /translation="MTDKNTTLVPEEGWHCLHLFYRIEYGQWQLLSREEQNAAKTNLS
                     SLVQEVRAMDSTQLLTLGIVTPKADIGFMLVTPDLHDANSIEKRLSLSLGPDVLTPVY
                     GYLSLTEESEYITTEEEYAQTLESGVRKDPTKLEEALRSFRERITHYRQERVYPTLPD
                     WPVVCFYNMSKRRGEQRNWYALPYDERRKLMKGHATVGREFAGKVKQLITGSTGLDDA
                     EWGVTLFARDTFQIKAIVYKMRFDPVSAEYADFGEFYIGIQLPLDELFRRLQL"
     gene            complement(7477..8271)
                     /locus_tag="VIS53_08805"
     CDS             complement(7477..8271)
                     /locus_tag="VIS53_08805"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEY5767920.1"
                     /translation="MTWLDKLERRFGYLGIPGLIRIVIGFTALVYVLVFLNRGFESFL
                     TLDPALILRGQVWRLVTYIFLPQTFSPLWVLLALWFLWFIGEGLERAWGSFRLTFYFA
                     VGMIGTTIAAFFFGGNFSNGMLITSLFFAFARFYPEEVIYILFILPVKIKWLAWIYAA
                     FLMLGFFLGPNSYRAALIAAFINYFVFFGPEIIHQARHRRDVSTRRRRFESDSRSPAE
                     TLHRCAVCGATELSDPNLDFRVARDGEEYCMAHLPKVGSAVEGSGD"
     gene            8404..9510
                     /gene="gcvT"
                     /locus_tag="VIS53_08810"
     CDS             8404..9510
                     /gene="gcvT"
                     /locus_tag="VIS53_08810"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEY5767921.1"
                     /translation="MSEAVHKKTPLYDEHMRLGAKMVPFSGWLMPVQYASIVEEHLAV
                     RNNVGVFDISHMGQFIVDGADARDWLNSMLTNNVDKLDVGTGQYTFLLNDRGGIIDDL
                     IVYRIDKQMYLLVVNAARVDEDFAWLQDHLKEGCSLTSRSADFGAVAIQGPQTMALFH
                     ALFSKDIELPARNHIVDVPFNTTNVSVARTGYTGEDGIEVFFPAKDAVKFWSATLERG
                     KSLGIKPCGLGARDTLRLEMCYPLNGSDLSPERNPIEAGLGFFLDLAKPDFVGRDALL
                     KTKEFGPREKLVPFRMKEKGPPPRPHYAVFRNGERVGEVTSGTLSPSLNWGIGMAYVS
                     SAHAKIGAEIDIEIRAQKFPATVEKKPLYRKPAS"
     gene            9507..9884
                     /gene="gcvH"
                     /locus_tag="VIS53_08815"
     CDS             9507..9884
                     /gene="gcvH"
                     /locus_tag="VIS53_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEY5767922.1"
                     /translation="MIIPDDLLYTESHEWIKREGENVRVGITDHAQSELTDVVYVELP
                     KLERQANAKEPIAIVESVKAASDIYAPVKGTIVEANNALEADPGLINREPYGQGWIFV
                     LKIENPDDLKNLKDAATYKKQIG"
     gene            9881..10441
                     /locus_tag="VIS53_08820"
     CDS             9881..10441
                     /locus_tag="VIS53_08820"
                     /inference="COORDINATES: protein motif:HMM:NF024769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEY5767923.1"
                     /translation="MKPKFFRTPADFVIWLEKNHATATELWVGFYTKDSGKPSITWLE
                     SVDQALCFGWIDGLRKRVDEISYQIRFTPRRRGTIWSTTNIKRAKELTRQKQMQATGL
                     KAFAARIENKSGIYSYEQRSSELNQPYANLLKKNKAAWSFFEKQPPSYRKMIGWWIIS
                     AKKEETRMARLAKLISESAKGKRLLQ"
BASE COUNT         2579 a         2774 c         2844 g         2264 t
ORIGIN      
        1 attagatcga ccgcgaaatt cgctgcgcga tttgcttaag atgtagctgc ggccctgcgg
       61 gccgcgtgcg cgcgtttcgc acagacgcgg ctacaatggg tcggccggga ctcgaactcg
      121 gaaccaaccc cgaggggttc ggggctgctc aatcatcttc catgccgcct acggcaaaga
      181 aggaatccag tcgggaatgt ccgttgtcat tgcttctgca ccgtctgggt ccgcaaaagc
      241 cagagcggca gatcgcgcat taatcgtggg ttcgacgcgc cggattcgtc cgtggctgcg
      301 tctctttcgt tttccatcac agaggctgcg acgattccaa tggcgttgcc ggtttctgaa
      361 acgatcggcg agccggacat gccgccttca atcggttgcg cgggctttga gacccagagc
      421 ggaccatcaa tcctttccat ccactggacc tggcatccaa accattcccc ttccagacta
      481 agaagaaagc cgcgggcctt ctccggtgcc tcagtaattc ggaacggtgt agcgtattcc
      541 aaaagcgcac ggtaaccgtc tgcttcatcg gaataggtct gcgtatcggg aacgccaacc
      601 acggccacgt cggcgatggg atttatgaac agacactcgc aagcgacagt cggggcggag
      661 ccgagcgggc cgagcatctt ccggtaaacg tgttcttcgg agtaagcgat gccgaacccc
      721 gaaggaagcc agggcaagca gtggctggca gtaacaacaa ggtgttcacc gcggtgctcg
      781 acgacaaatc cgcgtccctc gccaacggta atcaccgtgc ctttgggttc tgtcgctcta
      841 atccgcatgt ctgggtaaag ctcttgcgct gcttttcgcg ttttcggccg gaaccattca
      901 cggatgtcgt tgctgtactt tgtctgtgct ggttgttcgc gttgttgttc ctgccgttgg
      961 cgagggtcgg cgagaatcgg tttgtgaaaa ccggcgagta tcttcgtctc ttcgggtttc
     1021 atcacttggc gatgatagtc atgaacatgg actcaaacat caaggacaac gtcgagcgag
     1081 cgcgtcgcaa gatgtaaacc caagccatag aaaatcgttg ggtcggccgg gactcgaacc
     1141 cggaaccaac gccttaaaag ggcgctgctc taccgattga gctaccgacc cgcgaggttt
     1201 cagtttccag tagctaaaga atttttcaat ccagaaccaa ccccgaaagc tttcggggct
     1261 gctctaccga ttgatctacc gacccgagcc gggtttcact ttgtaatgcc cgcgagattt
     1321 ttcaatgtac aatgacgccg ctggatgatc tcacacaaac acaaatgcat cttcgtcgag
     1381 gtgcctaaga ccggatcgac cagcgtcagg gccattctgg gcaaagcgtg gaagccgcat
     1441 ctgaatttat ggcagatcaa acagctgatg gaaacgtcct ggacggaatt cggcgggcga
     1501 aaaaaccgca tcatagccgc gctttatttg ctgcagcccg aagagcgccg aagagaaacc
     1561 gggcgcaaac aattcgaatc ctatttcaag ttcggatttg ttcgcaatcc atgggaccgg
     1621 gttgtatcgc tgtatgagcg cacggaagca ttacagctcc ggaacgagat gagcttcgaa
     1681 caatttgtcg attggattca gtacagcagc accacatgcg tgcattcggc cccgcaccgt
     1741 taccaactcg actggtttgt tgatgctaac ggcaatctgt tagccgattt catcggacga
     1801 ttcgagcgac tggatgagga ttgggctttt gtggcgcaga agctcggcct ggaggagaag
     1861 ttgccgcacc gacgcgaaaa cccgcgggga cgtcattaca ccgagtatta cactcctcga
     1921 acaagagata tcgttgcagc gaagttcaaa gtggatattg accggttcgg ttatgagttc
     1981 gccggataaa ataaaagcga tcgttctcac gtgtgaccgc tttcgtgcga tcacgcggca
     2041 tctcattctt aaatacgagc ggctgtggcc ggatcacccg tttgtttttc atgttccata
     2101 tcaggaactt cgcggaaccg ataccgaccg agtcaagtac cacgcggcgc ccgaggacat
     2161 caaggggacc atcctgcatt tgctggcaga catcgatgac gaagaatgga tttactggtg
     2221 cgtggacgat aaatacccga ttcagcttcc taccgacaag gtatccagcc tcatatctca
     2281 cgcgatgcgt tcacctggaa tcgacggcct tttattctgc agatgcaggg ctctattgag
     2341 catcccccgg ctcacactcc accctcacaa agtgaaaaac ctgttcggcg atgtttatct
     2401 cgaacgaaaa ggttggtggc agatatggat ccatcagatc atgcgtgcca aggtgcttcg
     2461 acatctcttt aagcatttac ccgatcacat tcccaatgcc aagacaatgg atgatcttaa
     2521 ggacgacatt cccaagctgc ccgagcacag gttgttcgtg accgagaaaa attacgcagt
     2581 ttttggcgaa agcacccggc gcggcatgat cacgcaaaac tgctacgaaa gtatcgtgga
     2641 ctcggggatt gagctgcctg aatggtttca acagccggac ggcgaatacg tgacgcttgg
     2701 gaaattgtga gagaccggtg cgccgcatac tgaaaatgtt tgcccctgcc gagtttctgg
     2761 acctcgaaca cacggctcat ccgaagctgt tcgagaacca gaattatgtt tgggacgcgc
     2821 tcaaaccgat cgcaagttac ctgcaatttc ggctgaaacc agccatcttt ggcgagttaa
     2881 cgggcaagcc gtttatcagc aatcgcgtgt tcgttggcag aggaacggtc gttgagcagg
     2941 gcgcggtgtt gaagggcccg gcgtggatcg gtgaaaactg ccagattcgc agcggttgct
     3001 acgtgcgcga gaacgtcatc gccggcaatg gcgtcgtaat gggcaactcg tgcgaattca
     3061 agaattgcat tctgttcgat gaagtacaag tgccgcattt caattatgtc ggcgactcca
     3121 tcctgggcca ccacgcgcac cttggcgcgg gcgtgattct ctcgaatgta aaactcaatc
     3181 acggcgaaat cgcggtgagc acaccggacg gcgacattcc taccggccta agaaaatttg
     3241 gcgcaatcat aggcgacaga gccgagatcg gctgcaattc ggtgatcaat cccggctccg
     3301 ttatcggccg cgattgcgtg atttatccca ccgtaaattt ccgcggcttc ctgccgcacg
     3361 gcagcagggt caaactgcgg caggagttgc aagtgatcgg gaaacgctga cggggcgagc
     3421 gagttcggca cgtcgcgtcg ttaggattcg taaacgcaac gcaaggagaa atgtgcgcgg
     3481 cgaccaatta cagtttcgcg aaaagtgcaa aaaattctga tgaccgccgg attttttccg
     3541 atccaagaag cgtctcaatg atggcttgcg tgcgatgtaa gtgtttggag ggaagaatcg
     3601 atggtgcgcc gtggtcaaaa aaactctgcg ccgttgtacg ctgaacctga atcaacgggc
     3661 ggacctgcga gggcggagct gattaagctc atccggcacc gactgcacga gccacttggt
     3721 ccgactttgc tagtgctgca gctcctgctg cgcgaagaat cgctttcgcc gcaaggtgtt
     3781 gctcttattc gaatgctcca gcgcagcatc aaagaagaag tacgcgccat ccacgaactg
     3841 ctgagcatca tagaaacctt tattcaagaa ccgacccagg cggatagtga ggcagaacag
     3901 cgataggaag aatcctccct atcgcatttg tcttaagtgt ttcgaccttc gcgcacgtaa
     3961 gatttgtgcc ggtttcacaa ttaatcgtga acccactaca aacccaggaa cgaatcattc
     4021 cagcgagacg cgcaatgacc aggcatcaac tgttcagtcg cggccaatga aataccgaat
     4081 atttacttac tcgggcgatg cacttcccat tgctcacaaa ctccagcagg aaggtcgtga
     4141 agtggtagtc ggcatggtcc acgacaaagc agcgatccat tctgtgaaag agggcgaggt
     4201 gcgaccagaa aatcccgagg cgaaacggcg ccgactggca ttatttgacg gattaatcga
     4261 gaagcgcccg gctaatcttc tgatcgagga aatgcggggc tatgaggacc ctgaagatta
     4321 cttcgtattt ttcgatcgaa atcatttgtt ccaatttagc gatcagatcg ccggaatgcc
     4381 gttctacggc aactttccga ccgaagcgga ttacttattc gaacggaacc gggaccaggc
     4441 gaagcaactg gtacgcgagc attatccgcg gttgcaggtg cccgatgtaa aggcgtttga
     4501 tgatgtgctt gaggcgcttg agttcctaaa atcgacggaa caattatggg tgctcaaagg
     4561 tcaggatgac agcgtcaaga cattcgttcc ggatgtcgat gacccgaaac tggctgccag
     4621 acagatcatc gagacgttga aagagaacaa ggcagcctac gactgttccg gatttatcct
     4681 cgaagaacta atcaatcctg cgatcgagat aacaccggag aaaatctatt acgatggagt
     4741 gccgctggct gtcgtactcg agtttgaaaa caaaccgttc ggcagcggga acatttcgat
     4801 tcagaccggg tgctctcaga atctgctttt cccgattgca atgggcgaca agatcaacag
     4861 tatcgctttt ccgccggtgg tcgacgcaat ggccaagcag cataaaggtt tgttttactg
     4921 ggatgcctcg cttctcatcg acaagcggac cggcaagatc tacttcggcg aattctgctc
     4981 aaaccgcccc ggctataact cactgttcac cgaactcgcg cagtgttcgt cagtggatca
     5041 ttatttttca tccgttgttc gaaaagagag cccgttcaaa ctcggaacag tggccacttc
     5101 agttttgctc ttgaatcccg ccacagacga ggagactggc cgcactaccg agggcttgcg
     5161 cgtcgattat aaaccggaga tcgagcaaaa tctgtggtta tgggatgtcc gccgcgaagg
     5221 caaccgcctt gtaaccgtgg gcgacgactg gaatctgggg gtcataagcg gatccggtga
     5281 ttcaatcgat caggcggtca attcgatgta caaaagcgtg gatggcttct cctttgccgg
     5341 cgcttattac cggccgaaat ccgacttcct ttcgctcgat tatccgacct cgatattgaa
     5401 ccgcgttaat tacggcctgg agaagaagct gtatcagctg ccgttcaacg taagagtcgc
     5461 tcacattaag aagtagtcac gccaaacagc cgctcggcgt tggcatgcat gactgcttca
     5521 tgttcggctt gttccatctc gagtgcctcc accgctccca aatagtcctt ctgtgagtac
     5581 aatggataat ccgtgccaaa caaaaacttc tcgtaggaat acaaaaaaac ccgaacctgt
     5641 tccatgcgtt gtttgaacac ctcaacgtca tgagcggtga tcgatctgtt ttcggcgaag
     5701 aaagctgaca tgtcggcata gacattttga tttttcgcaa gcacagccgc gcaatcgatc
     5761 agccacgggt tacccatatg cgccataaca atggtgagat ttggaaatcg ggtcgctacg
     5821 cgatcaacct gtaacgggtg cgaatactcg agcaaccccg tgctgccggt ttcgagaacg
     5881 ccggtgtgaa acatgatcgg cacatcatgc ttctcacaat actcgtacaa ctgatgcagc
     5941 cgctcgtcgt cggccgaata ttcctcgtaa ccgagataaa acttcaaccc gaccacccta
     6001 tcctcatgca gaagttgcgt cagctcctcg acgtacttta gctcaacggt ttttgagaaa
     6061 acgcagttta taatcgccca cagcctgtct gaacgccgga ctgcttccag cacctgagcg
     6121 acgttggaaa tgtccccggg caacgtctcg gcgatgacga tcgaggcgtc gattcccgct
     6181 tcgtccatcg atcgaagcaa tttgtctgcg gcgccgtcat cgtcgaggtg cgtatggcaa
     6241 tcgacaacca tgcgtctact aaaggcctgc cgtgtacctg ttcaacgctg gtttttgcgg
     6301 ctcggctagt atcagaagca aacggatggg gggggattcg aacccccggt gcctttcggc
     6361 acacacgctt tccaggcgtg cacaatcaac cactctgtca cccatccaag cgccgcacac
     6421 tttaactgca aatctgctgt acgggaagct gacagcttcc tggctttgat ttgctgtagc
     6481 cgtcgcccag cgggcgacat gacagggtgt caactacgtc agcaccacgc ttcccacagg
     6541 gagcggctac aaactccaag ctcggagagc gccgttacag gttcacagct gcaagcggcg
     6601 gaacaattcg tcgagtggta attgaatgcc gatgtaaaat tcgccgaagt cagcgtactc
     6661 ggcgctgacc gggtcgaagc gcattttgta gacgatggct ttgatctgaa acgtgtcgcg
     6721 cgcgaaaagg gtcacgcccc attcggcatc gtcgagaccg gtcgaaccgg tgatcagctg
     6781 tttgactttg ccggcgaact cgcgcccgac agtggcgtgt cctttcatta gtttgcggcg
     6841 ttcatcatac ggcagcgcat accagttgcg ttgctcgccg cgacgcttgc tcatgttata
     6901 aaaacaaact accggccaat cgggcagcgt agggtaaacg cgctcctgtc ggtaatgtgt
     6961 gattcgctcg cgaaatgatc ttaacgcctc ttcaagcttt gtaggatcct tacggacacc
     7021 cgattcgagc gtctgtgcgt attcttcctc ggtcgtgatg tattcgctct cctcggtcag
     7081 cgacaaatag ccatagactg gcgtgagcac gtctgggcct aacgagagcg acaaccgttt
     7141 ctcaatgcta ttggcgtcgt gcaaatcggg cgtgaccagc atgaagccga tatcggcctt
     7201 cggcgtcacg atcccaagcg tgagcaattg agtggaatcc atcgcacgca cttcctgaac
     7261 cagggaagag agatttgttt tcgcagcgtt ttgttcctcg cgactaagta actgccattg
     7321 gccgtactcg atccggtaaa ataaatgcaa acaatgccag ccttcctctg gaacaagcgt
     7381 ggtgttctta tcagtcatcg cggtagtctc ggacctgcta tttaatggtc aaggaggtag
     7441 gggcggttca ctcgaaccgc ccgcaggcga ttgaggtcaa tcgccgctac cttcaacggc
     7501 gctccccacc ttcggcagat gcgccatgca atattcttcg ccgtcgcgcg cgacccgaaa
     7561 atcgaggttt ggatcgctta gctcggtagc gccacagacc gcgcagcgat ggagcgtttc
     7621 agcggggctg cgcgagtcgg attcaaaacg tctgcgtcgt gtcgagacgt cgcgtcgatg
     7681 tcgcgcttga tgaataatct ccggtccgaa gaaaacgaaa tagttaatga atgcggcaat
     7741 gagcgccgcg cgatacgagt tcggtcccag aaaaaacccg agcatcaaga aggcagcata
     7801 aatccaagcg agccatttga tttttacagg caaaataaaa agaatgtaaa tgacttcctc
     7861 gggataaaag cgcgcgaatg cgaagaacaa tgacgtgatg agcatgccgt tggagaaatt
     7921 gccgccgaaa aagaatgccg cgatggttgt gccaatcatc cctacggcga aatagaacgt
     7981 cagccggaac gagccccacg cgcgttcgag accttcgccg atgaaccaca gaaaccagag
     8041 cgcgagaagc acccacagtg gactgaacgt ctgcggaagg aagatgtatg tgacgagccg
     8101 ccaaacctgg cctcgaagaa tcaaagcggg atcgagcgtt agaaacgatt cgaagccgcg
     8161 attaagaaaa accagcacat acaccagcgc ggtgaagcca atcacgatcc ggatcagtcc
     8221 cggaatgccc agataaccaa agcggcgttc gagtttatcc agccaggtca ttgctggcgc
     8281 aagctaatgt cccgcaggtc gcgtgcaagg tggatcgcgt tgtcctcaac gcgatggatt
     8341 tcatcgtcta cggagaagcc gatccacctt tgcgcataat cacagcgccg attagctagg
     8401 cccgtgagcg aggccgtaca taagaaaacg ccgctttacg acgagcacat gcggcttggc
     8461 gcgaaaatgg ttcccttctc cggctggcta atgccggtgc aatacgccag cattgtcgag
     8521 gaacatctgg cagtgcgaaa caatgtcggc gtcttcgaca tttcgcatat gggacagttc
     8581 atcgtggacg gggccgatgc gcgagattgg ctcaatagca tgttgaccaa caacgtcgac
     8641 aagctggacg tcggcaccgg ccagtacacg tttttgctca atgaccgcgg cgggatcatt
     8701 gacgacctga ttgtatatcg catcgacaag cagatgtatt tgctcgtcgt gaacgctgct
     8761 cgcgtggatg aagattttgc atggctgcaa gatcatctca aggagggttg ctccctaaca
     8821 agtcgcagcg cggattttgg cgcagtggcg attcaaggcc cgcagaccat ggcattattt
     8881 catgcgcttt tcagcaaaga catcgagctg ccagcgcgaa accacatcgt tgatgttcca
     8941 tttaacacaa cgaacgtttc ggtcgcccgc accggttaca ccggcgagga tggcattgaa
     9001 gtgttcttcc ccgcaaagga cgcggtgaag ttttggagcg caacgcttga acgaggtaag
     9061 tcgcttggaa tcaagccgtg cggcctgggc gcgcgcgata cgttgaggtt ggaaatgtgc
     9121 tacccactaa atggttccga tctatcgccg gagcgaaacc cgatcgaggc gggattagga
     9181 ttcttcctcg atctagccaa accagacttc gtcggtcgcg atgcgttgtt gaagacaaaa
     9241 gaattcggcc cgcgcgaaaa gctggtgccg ttccggatga aagagaaagg tccgccgccg
     9301 cggccgcact acgctgtttt tcgcaacggc gagcgcgtcg gcgaagtaac cagcggaacg
     9361 ctttctccga gcttgaactg gggcatcggc atggcgtatg tgtcgtcggc gcacgcgaag
     9421 atcggcgctg agattgacat cgagattcgc gcgcaaaaat tcccagcgac cgtggaaaag
     9481 aaaccgctct acagaaaacc agcatcatga tcatcccaga cgatttgctc tacaccgaaa
     9541 gccacgaatg gattaagcgc gaaggcgaga acgtccgcgt cggcatcacc gatcacgcgc
     9601 aatcggaatt gaccgacgtg gtttatgtcg agctgccaaa actggagcgg caggccaacg
     9661 ccaaagaacc gatcgcgatt gtcgaatcag tgaaagcggc gagtgacatt tacgcgccag
     9721 tgaaaggcac aattgtcgag gcgaacaacg cgctcgaagc cgatccgggc ttgatcaacc
     9781 gggaaccgta cgggcaaggg tggatattcg ttcttaagat cgagaatccc gacgacctca
     9841 aaaatctgaa agacgctgcc acttacaaaa agcagatcgg ttgaaaccga aattttttcg
     9901 aacgcccgcg gatttcgtaa tctggctgga gaagaatcac gcgactgcga ctgagctttg
     9961 ggttgggttt tacacgaagg attcgggaaa gccgagcatc acatggctcg agtcggtgga
    10021 tcaagcgctc tgcttcggtt ggatcgacgg acttcggaag cgcgttgacg aaatcagtta
    10081 tcaaattcgg ttcacgccgc ggcgacgcgg gaccatttgg agcacaacca atatcaagcg
    10141 cgccaaggag ctcaccagac agaaacaaat gcaagcgacc ggattaaaag ccttcgcggc
    10201 acgcatcgag aacaagtcag gcatctattc gtacgaacaa cgaagcagcg agttgaacca
    10261 gccgtacgca aatttgctaa agaagaacaa agcagcgtgg agctttttcg aaaaacagcc
    10321 gccgtcgtat cgaaaaatga tcggctggtg gattatcagc gcgaagaagg aagaaacgcg
    10381 aatggctcgc ctggcaaaat taatcagcga gtctgcgaaa ggaaaacgct tgcttcaata
    10441 acgatcggcc tttgctaacg a
//
LOCUS       DATDAJ010000354         2496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1994212, whole genome shotgun sequence.
ACCESSION   DATDAJ010000354 DATDAJ010000000
VERSION     DATDAJ010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1994212"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..259)
                     /locus_tag="VIS53_08825"
     CDS             complement(53..259)
                     /locus_tag="VIS53_08825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767924.1"
                     /translation="MKEIVVIFVEARDVNLSAGHPSGAAKDRADKYIIDNDSVQPFWT
                     WFIENPRPGSFRSVSSLAGLTLAP"
     gene            complement(356..1045)
                     /locus_tag="VIS53_08830"
     CDS             complement(356..1045)
                     /locus_tag="VIS53_08830"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5767925.1"
                     /translation="MKPARRALIIDDEKQIRRLLRIALEEAGHQVEEAETGQAGLAEI
                     VQRRPDVVLLDLGLPDMEGIKVLRRLREWSDVPVLILSVRDDPDEKVAALDAGADDYV
                     TKPFDTAELLARVRVAQRRSLKELGEPVFNSGPLCVDFAARQVKISGEEIRLTPTEYS
                     LLRVLVQHAGKVVTHRQLLRTVWGEKAESQAQYLRVYVTHLRKKLEVDDNAQQLIRTE
                     VGIGYRLSTDH"
     gene            complement(1042..2205)
                     /locus_tag="VIS53_08835"
     CDS             complement(1042..2205)
                     /locus_tag="VIS53_08835"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY5767926.1"
                     /translation="MRPSDWRVIEENSSQSATTAKAHSEEEFSSSPSFAPLKQYIAAV
                     IGVAGLTVICWLLTPLTGYAAISLIFLLGVLLAGMVLSRGPVLLVAALSALSWNFLFI
                     PPLFTLHIAKLEDALTFAAYFIIAITVGSLTAQLKAREHLAAQVQLAQESERLRKTLL
                     DCVSHELKTPLAAIGAASQELSRLAANTQDSQVLEELAGEIRAGSRRLNRVVDNLLDM
                     NRLESGVIRPKREWCDVRELLQSAIDIERESLNGREIRLDVPTEIPLALVDHTLIEQA
                     VAKLLANAGAHTPPRLPIEIDADYANDHLVISVADRGPGIPPETTERLFEKFYRGDNR
                     KTGGLGLGLSIARGLIEAHGGKLTVENRDGGGARFIITLPVRVTDVDKMEGTP"
     gene            2303..>2496
                     /locus_tag="VIS53_08840"
     CDS             2303..>2496
                     /locus_tag="VIS53_08840"
                     /inference="COORDINATES: protein motif:HMM:NF014731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY5767927.1"
                     /translation="MKTLHSAPPSLLPTIADSAGIPAAVTGSKHRRNRLVLLCLASLG
                     IVYGDIGTSPLYAMRECFYG"
BASE COUNT          536 a          688 c          681 g          591 t
ORIGIN      
        1 attttattca gcttcgagtt aaacgaagtg ttactcgcgc ggcaagccgg ctttacggtg
       61 cgagcgtcaa acccgcgaga ctgctgacag atctaaaaga accgggccgt ggattctcga
      121 taaaccaagt ccaaaaaggc tgtaccgaat cgttatcgat aatgtattta tctgcgcggt
      181 ccttggcagc gcctgatgga tgtcctgccg ataggttcac gtctcgcgct tcgacgaata
      241 tgaccacgat ttccttcatc ccgaaggatc gcccccacta gaccgcggct gctaattaaa
      301 atatggctct gaaacgctaa aagattgtta acgtttcggg agtcgcggcg cgttatcagt
      361 ggtcagtcga aagtctgtaa ccgattccga cttctgttct gatgagttgc tgcgcgttat
      421 cgtcgacctc gagttttttg cgcaaatggg tgacgtaaac gcgaagatac tgcgcctggc
      481 tctcggcctt ttctccccag accgtgcgaa gcaattgccg atgagtgacg acttttccag
      541 cgtgttgcac caggacgcgc agcaacgagt actcggtcgg cgttagcctg atttcttcgc
      601 cactgatctt tacctggcgc gccgcaaaat cgacgcagag aggtccggag ttaaagacgg
      661 gctcgccaag ttctttgagc gagcggcgtt gggccacgcg gacgcgggcc aacagttccg
      721 cggtgtcgaa cggctttgtc acatagtcat cagccccagc atcgagggca gcgacctttt
      781 cgtcagggtc atcacggacc gagagaatta ggaccgggac gtccgaccat tctcgcaaac
      841 gtcgcagcac ctttatgcct tccatgtcgg gcaaaccgag gtcaagtaat accacatcgg
      901 gccgacgctg aacgatttcg gcgagcccag cctgtcccgt ctctgcttct tcgacttggt
      961 gacccgcttc ttctaacgca atgcggagca accggcggat ctgcttttca tcatcgatga
     1021 tgagggcgcg gcgagctggt ttcatggtgt cccttccatt ttgtcgacat cagtgacgcg
     1081 aaccggcagc gtaataatga agcgcgcgcc accaccgtcg cgattctcga cagtgagttt
     1141 gccgccatgt gcttcgatca agccacgtgc aatcgataaa ccgagcccga ggccacccgt
     1201 tttgcgattg tcgccgcggt agaatttttc gaacagtcgc tccgttgttt cgggcggaat
     1261 gccaggcccc cgatcggcca cagaaataac cagatggtcg ttcgcgtagt cggcatcgat
     1321 ctcgatcggc aatctgggcg gcgtatgcgc accggcgttt gcaagaagct tcgcgacggc
     1381 ttgctcaatc agcgtgtgat cgacgagtgc caaaggaatt tctgtcggta cgtccaatct
     1441 gatttcgcgg ccattgagcg attcacgctc tatgtctatc gccgattgca gtagttcgcg
     1501 cacatcgcac cattcgcgct tcggccgaat tactccgctt tcaagccggt tcatgtccag
     1561 aaggttgtct accacgcgat tgagccgccg cgatccggcg cgaatttcgc cggccagctc
     1621 ttccagaact tgtgagtcct gagtgttggc cgcgagacgc gagagttcct ggcttgcagc
     1681 tccgattgcc gcgagaggag tcttcagttc gtgcgacacg caatcgagca acgttttgcg
     1741 gagcctctcc gattcttgtg ccagttgaac ctgggccgcg agatgctcgc gtgccttcaa
     1801 ctgcgcggtc aggctgccga ccgtgatcgc gatgatgaag taagccgcaa acgtcaatgc
     1861 atcttcgagc tttgcgatgt gcaacgtaaa cagtggtggg ataaacaaaa aattccaaga
     1921 aagcgcgctg agtgctgcaa ctagcaagac gggaccgcga ctgagaacca ttccagcgag
     1981 cagcacgccg aggaggaaaa taagagagat ggctgcgtat ccagtcagtg gtgttagcaa
     2041 ccagcatatg accgtcagcc cggctacacc gatcactgct gcaatgtatt gttttaatgg
     2101 cgcaaaagat ggtgacgacg agaactcctc ctcgctgtgc gccttggccg tggttgcaga
     2161 ctgagaggaa ttttcttcga tgacacgcca atctgacggt ctcatcccga ttaatctaac
     2221 gcatccagat gtatgcgaaa tgatgcgttc aaattttagt accgttttaa ctattcgggg
     2281 gttgtggccg atctaaagtt ccttgaaaac gttgcattct gcgccgccat ctttacttcc
     2341 aaccattgct gattctgctg gtattcccgc ggcagttaca gggtcgaagc atcgccgaaa
     2401 tcggctcgtt ctgctctgtc tcgccagtct tgggatcgtt tatggcgata tcggcaccag
     2461 tccgctctac gcgatgcggg agtgctttta cggaca
//
LOCUS       DATDAJ010000355         3398 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1995598, whole genome shotgun sequence.
ACCESSION   DATDAJ010000355 DATDAJ010000000
VERSION     DATDAJ010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3398)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1995598"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VIS53_08845"
     CDS             complement(<1..435)
                     /locus_tag="VIS53_08845"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEY5767928.1"
                     /translation="MTIYFVAGEVSADNHGAALMRSLRVLDPELKFIGRGGPQMQHVA
                     GGQFKNWIGDAAVLGLWEVLRKYGYFREQFRQTLTEIHESKPDAVVLIDYPGFNLRLA
                     RSLRRQSQRHKTIYYISPQVWAWNRGRIKKMARFIDLVLCIFP"
     gene            complement(574..1494)
                     /locus_tag="VIS53_08850"
     CDS             complement(574..1494)
                     /locus_tag="VIS53_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY5767929.1"
                     /translation="MKKLRIGVVGVGHIGSNHARLYAEIPSAEFTAVYDVEPFRSRTI
                     ASKSGAASAKSLEDFIPMVDAVSVATPTNTHYDVARALLAKGKHVLIEKPITDNTAHA
                     TELAELAALNGLILQVGHVERFNPVLGTLEKHLTHPRFIESHRLAPYTERSADIGVVL
                     DLMIHDLEVILHFVRSPLWSIDAVGVPVLSQSEDIANARLHFEDGCVANVTASRISPE
                     RMRKIRIFQEDAYISLDYQNQSGEIYRRVGKQIWRDRAEIEHGEPLKLQLTSFIECAT
                     TGRQPRVSGSQATAALELAVKITKQISSIG"
     gene            complement(1635..2576)
                     /locus_tag="VIS53_08855"
     CDS             complement(1635..2576)
                     /locus_tag="VIS53_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEY5767930.1"
                     /translation="MQLKKSDKIFVAGHHGMVGSAFMRRLESEGFTNLLKPDRSRLDL
                     MDEAAVLHFFLGERPVIVILAAAKVGGIKANNDYPVEFLLDNLRIQNNVIRSAYQTRV
                     RKLLFLGSSCIYPKLAPQPIPEGALLTGPLEPTNEAYAIAKIAGIKLCQAYTREYGAN
                     FISVMPTNLYGPNDNFDLETSHALAALLRKAHEAKTRNEKKLVVWGTGKPRREFLHVD
                     DLAAACLLLLEKYDSPEIINIGCGEDVTIRELAELICDAVGFDGELVWDKTKPDGTPR
                     KLLDVRKIRALGWEPSIPLRKGIAQTYEWFLANRAQQ"
     gene            2672..>3398
                     /locus_tag="VIS53_08860"
     CDS             2672..>3398
                     /locus_tag="VIS53_08860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767931.1"
                     /translation="MRFIPWFAAIGVASAGLAQTSPSPKGPVDHLIPWLLDEDQQLRG
                     VPFSDLIFDATGRKVLPFAANNAVDQRVAKAITAACEETMKRLNAPDSAIQNVDRINE
                     VSSHFEDTLRQLLNTTPGLQCEFPLTAEGKIQRSGYPDLRITDLESKRVFYLDPKLYA
                     AGSRDSSFRTFYFEPKKSTNKVRDDAVHFVVGYEHAPRETASGSRNATWKVTRWDLVD
                     LSRFTVKLKAEFQGSNRDMYRPEA"
BASE COUNT          747 a          923 c          955 g          773 t
ORIGIN      
        1 cggaaagatg cagagcacaa gatcgatgaa gcgcgccatt tttttgatgc gtccacggtt
       61 ccaggcccag acctgcgggc tgatgtaata aattgttttg tggcgttgcg attgccttcg
      121 cagagagcgc gccagtcgca agttgaaacc tggatagtcg atcaaaacga ctgcgtcggg
      181 tttgctttca tgaatttccg tgagcgtctg acggaactgc tcccgaaaat agccgtactt
      241 tctcaggact tcccataaac ccaggacggc tgcatcaccg atccagttct taaattgccc
      301 gccggcgacg tgctgcattt gcgggccgcc gcgtccgatg aatttcagct caggatccaa
      361 aacgcgcagc gagcgcatca acgctgcgcc gtgattatcg gcactcactt cgccggcgac
      421 aaaatagatg gtcatggatt taatctccgt tgtagccacg gacctgtggc tcgtccatcg
      481 ttgatgctca caaaaagacc ggtcctccgc cgtcgccaag ctacagcgcg acatgcacgg
      541 cggtggctac agcaaagacg cgagcgagcc gtcttatcca atcgacgaga tttgcttcgt
      601 gatcttaaca gccagctcca acgccgcggt tgcctgagaa ccggaaacac gcggctggcg
      661 tccggtggtt gcgcattcaa tgaacgacgt gagctgaagc ttgagtggct cgccgtgttc
      721 gatctcggcc ctgtcacgcc aaatttgttt accgacgcgg cgatagatct cgccgctttg
      781 attttgataa tcgagcgaga tataggcgtc ttcctgaaag attcgaatct tgcgcatccg
      841 ctcggggctg atgcggctgg cggtcacgtt tgccacgcaa ccgtcttcaa agtggagtct
      901 cgcgtttgca atgtcctcgc tctggctgag cacgggaacg ccgactgcgt cgatactcca
      961 aagaggcgag cggacgaaat gcaggatgac ttcgagatcg tgaatcatta aatcgagcac
     1021 aacaccgata tcagcgctgc gttccgtgta cggcgcaagc cgatgcgatt cgatgaagcg
     1081 cggatgggtc agatgttttt cgagcgtacc cagaaccggg ttgaagcgct cgacgtggcc
     1141 cacttgcagg atgagaccgt taagtgcagc caattccgca agctcggtag catgtgcagt
     1201 gttgtcggta atcggtttct cgatcagcac atgtttgccc ttggcgagga gagcgcgtgc
     1261 aacgtcgtag tgcgtattgg tcggcgtggc cacagagacg gcgtcaacca tcgggatgaa
     1321 atcttcgagt gatttggccg atgctgcgcc agatttgctc gcaatggtgc ggctcctgaa
     1381 cggctccacg tcgtataccg ccgtgaactc agcggatgga atttccgcat agagccgtgc
     1441 atgattgctt ccgatatgcc caacaccaac aacgccaatg cgcagctttt tcattggtcc
     1501 cccaatgcag tcaactccga aagcttcgcg ggtcaacgct cgaaagtctt cggcaaggaa
     1561 tgatggcttc cgtcaggtct gaaatcgacg gctgctcaag ccgtcgctcc ttgaatagac
     1621 gcaatgcggc gtccttactg ttgcgcgcgg ttagcgagga accattcgta agtttgggcg
     1681 atgccctttc gcagcggaat gctaggctcc cagcccaggg cgcgaatctt cctgacatcc
     1741 aaaagcttgc gcggcgtgcc gtccggcttc gttttgtccc aaaccagttc gccgtcgaaa
     1801 ccgactgcat cgcagattaa ctcggccagc tcgcgaatgg tcacgtcttc gccgcagccg
     1861 atgttgatta tttctggcga atcgtatttc tcgagcaaca atagacacgc ggcggcaaga
     1921 tcgtcgacgt gcaaaaattc ccggcgcggt tttcctgttc cccacacgac cagctttttc
     1981 tcatttcggg ttttcgcttc gtgtgccttg cgcaggagcg ccgcgagtgc gtgtgatgtc
     2041 tccagatcga agttgtcgtt agggccgtaa agatttgtcg gcatgaccga gatgaagttc
     2101 gcgccgtact cgcgcgtata agcctggcaa agttttatgc cggcgatctt ggcgattgcg
     2161 tacgcttcat tggttggctc cagcgggcca gtgagcagcg caccttcggg aatcggttgc
     2221 ggcgccagct tcggataaat gcaggagcta ccaagaaaga gcagcttgcg gacccgagtt
     2281 tgataggccg agcggatgac gttgttctgg atacgcaaat tgtcgagaag aaactccacc
     2341 ggatagtcgt tgttagcctt gattccgccg acttttgccg ctgcgagaat cactatcacc
     2401 ggtcgctctc ctaaaaagaa gtgcaggacc gcagcctcat ccataagatc gagtcgcgat
     2461 cgatcgggct tcagtaaatt tgtgaagcct tcgctttcaa gccggcgcat gaatgcgcta
     2521 ccgaccattc cgtgatggcc ggcaacaaag attttgtcag atttcttcaa ctgcactgta
     2581 gtttctctag ccagaaattg cctggcaagc aagatgccca cacggtgttt ggtcttgctg
     2641 agaatagcgc ctccattttg aatccgggag gatgaggttc attccttggt tcgccgcaat
     2701 aggggtagct agtgccggtt tggcccaaac atcgccgtca ccgaaagggc ccgtggatca
     2761 cctgattccc tggttgttgg atgaagacca acaactgcgg ggcgtcccgt tcagcgacct
     2821 gattttcgat gcgaccggta gaaaggtgct gccgtttgcg gcgaacaacg cggtcgatca
     2881 gcgcgtcgcg aaagcgatca ccgccgcgtg cgaagagaca atgaagcgat tgaacgcgcc
     2941 ggatagcgcg atccagaatg tcgatcggat caacgaagtc agcagccatt tcgaagatac
     3001 tctgcggcag ctgctcaaca cgactcccgg cttacagtgt gaattccccc tcacagccga
     3061 agggaaaatc caacgttcag gttatccgga tttgcgcatc accgatctgg agagcaaacg
     3121 cgtgttctat ttagacccaa agctttacgc cgccggaagt cgcgacagca gtttccgcac
     3181 attttatttc gagccgaaga agtcgacgaa taaagtgcgc gatgacgcgg tgcactttgt
     3241 cgttggatat gagcatgcgc cgcgtgaaac tgcatcgggt tctcggaacg cgacgtggaa
     3301 agtcacgcga tgggatcttg tggatctttc gcggtttacc gtcaaactga aagccgaatt
     3361 tcagggcagc aatcgcgata tgtaccgccc ggaggcaa
//
LOCUS       DATDAJ010000356         3073 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1997785, whole genome shotgun sequence.
ACCESSION   DATDAJ010000356 DATDAJ010000000
VERSION     DATDAJ010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3073)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3073)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1997785"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /locus_tag="VIS53_08865"
     CDS             complement(<1..233)
                     /locus_tag="VIS53_08865"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY5767932.1"
                     /translation="MKSIHVSIRDQQLTLKENEQPIRTYPVSTSRFGIGAEEGSFKTP
                     TGRFRVAEKIGSEMPHGTVFVGRVPLQPDEAAPP"
     gene            281..1339
                     /locus_tag="VIS53_08870"
     CDS             281..1339
                     /locus_tag="VIS53_08870"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEY5767933.1"
                     /translation="MGGYHIAVVGATGAAGTELLRVLERRSFPVASLRPIGSARSVGK
                     SVQFCGDSIPIEKLDPGSFEKIDIAFFSAGGDVSRSHVPIACQADAIAIDKSSAFRMD
                     PHVPLVIPEINAEDARLHRGIIANPNCTTTVMLMALYPLHKIFRVHRVFASTYQAVSG
                     SGSRGVEELTRQTKAWAEENCSRRPVGDASRSPANESHASPGEAATVFPHPIAFNLLP
                     HVDSFLENGYTREEVKMQDETRKIMHLPELRVSATCVRVPVYRAHSVAVTAEFVRPVS
                     IQQAREILSKAPGLELVDEPHSNRYPMPLNVAEKDNCQVGRVRLDCALDNGLSFWVSG
                     DQLLKGAALNAVQIAELL"
     gene            complement(1318..1446)
                     /locus_tag="VIS53_08875"
                     /pseudo
     CDS             complement(1318..1446)
                     /locus_tag="VIS53_08875"
                     /inference="COORDINATES: protein motif:HMM:NF012585.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
     gene            complement(1478..1744)
                     /locus_tag="VIS53_08880"
     CDS             complement(1478..1744)
                     /locus_tag="VIS53_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767934.1"
                     /translation="MEKLPGALSKPQKALMKNREIYLIPKSTATLTQSGLLAMLLQRQ
                     RQKGSELAQPWSLTRAHGATTGRRWRRGFGAIKISDAVGSLHAL"
     gene            complement(2760..>3073)
                     /locus_tag="VIS53_08885"
     CDS             complement(2760..>3073)
                     /locus_tag="VIS53_08885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767935.1"
                     /translation="ERQRFGTPSPLGAAERQQRGTGAPSGVRQPVTAPPGGGATGAAP
                     AQRERMQSAQGQPPPPRQHQQPPQRQPGGAPAAAGQGQAQGQPEGGKQKPPKPTPPPR
                     P"
BASE COUNT          682 a          852 c          822 g          717 t
ORIGIN      
        1 ggaggagccg cttcgtcggg ctgaagcgga acgcgtccca cgaaaacggt tccgtgcggc
       61 atttcgcttc cgatcttctc cgccacacga aaacgaccgg tcggcgtttt aaagctcccc
      121 tcctccgccc cgataccgaa tcgagacgtg gacacggggt acgtgcggat cggctgttcg
      181 ttttctttca gcgtgagttg ctggtcccga attgaaacgt ggatgctctt cattttctgc
      241 tggcgacaaa ttactgttac agcgttacaa tcgaccgcta atgggaggtt atcacatcgc
      301 cgtcgtgggc gcgaccggtg cggccggcac tgaattatta cgtgtactgg aacgcagaag
      361 ttttccggtc gcaagtctgc gtccgattgg ttcggcgcgt tcagtcggga aatccgttca
      421 attctgcggt gactcgatcc cgatcgaaaa acttgacccc ggatcgttcg aaaaaatcga
      481 catcgctttc tttagtgccg gcggcgacgt gtcccgcagt catgtgccga tcgcgtgcca
      541 ggcagatgcc atcgcgatcg acaagtcttc ggcattccga atggatccgc atgtgccgct
      601 tgtcattcct gagatcaacg cagaggacgc gagactccat cgcggaatca ttgcaaatcc
      661 aaattgcaca acaaccgtga tgctcatggc attgtatcca ttgcataaga ttttccgtgt
      721 ccatcgggtt ttcgcttcaa cgtatcaggc agtctctggc agcggcagtc gaggtgttga
      781 agagctgacc cgtcaaacaa aagcttgggc ggaagaaaac tgtagccgtc gcccagtggg
      841 cgacgcttcc cgatcccccg caaacgaatc ccacgcttcg cccggcgaag cggctacagt
      901 ttttccgcac ccaatcgcct tcaacttgct gccacatgtc gattcgttcc tggaaaatgg
      961 ttacaccagg gaagaagtga aaatgcagga tgagacgcgc aagattatgc atttgccgga
     1021 gctgcgtgtt tcagcgacgt gcgtgcgcgt gccggtttac cgagcgcatt ctgttgccgt
     1081 caccgctgag tttgtgcgtc ctgtttctat acaacaagcg cgcgaaattc tgtccaaagc
     1141 acccgggctc gaactcgtgg atgaaccgca cagcaaccgt tatccaatgc cgctcaatgt
     1201 ggctgaaaaa gataattgtc aggtcggccg cgtgcgtctg gattgcgcat tggacaacgg
     1261 gctgtcgttt tgggtttcag gcgaccaact gctcaaagga gcagcattga acgccgttca
     1321 gatcgccgaa ttgctgtagt agaattttgc agcgacaagt tccacggccg ttgcgccgaa
     1381 gattgaacaa agcgcacgat caaaggtagt tggtgatccg ccgcgttgaa ggtgcccaag
     1441 aacgcaaacg cgcgattctt cttaactact acccgctcta aagagcgtgc agacttccaa
     1501 cggcatcact gattttgatc gcgccaaacc cacgtcgcca ccgtcgacca gttgtggcgc
     1561 catgagcgcg cgtcaaggac cagggctggg ccaattcgct gcctttctgg cgctggcgtt
     1621 gcagcaacat ggccagcagt ccgctttgag taagagtcgc ggttgatttg gggatgagat
     1681 aaatctctct gtttttcata agcgcttttt gaggttttga cagcgctccc ggcaattttt
     1741 ccatatggga ccttagtcct ttacgggata tcaaaggcgt cctcagtttc gacgcatttg
     1801 aaattcgctt tgcgatccta aaggtagcgc cgatctaagt ctcgcggaac tggctccgca
     1861 atacgatgta aactgcttcg gcggcctcaa tccccccgca taacgacttt gatttggacc
     1921 gacctgatgg aaaggccaac ggcaccatac gtggcgaaaa attcggctgc tattaaaacc
     1981 gcaccctcgc cagacgcctc agctgaacca cgcgttctgg tgccctgata tgagaactcc
     2041 acccggactg gatacggatt tgagtttgta aagcgcgcga ttcgggaagt gccggaagac
     2101 tgttcgtagg aaactgttac acccttcatt ttgctttggc ccgttacaac aggcccttgc
     2161 aaaatcaaaa tcaaaccgac caaaatgaaa atgcatcgac tagttccaga aagagtggtc
     2221 atagaagatg tcaaaaagca gactaatcgc ctatgtcaat actggaatta ggttccgtcc
     2281 aaatcgttac aatctggaga actggtaacg gaggcaccaa aatagatttt ttccgacata
     2341 aaaaattgga ttaaactctg ccttgttcgt tacgagctcg cgccgcggcg gcaaaccgcg
     2401 acgtggctct ggcaactgtt cgagttaccc aaaatggcat gcgagggatc cagctacgtt
     2461 cggactgcac agcggtcctt gggcgtctac gatctcatcg ctgccgctga gtggcgggag
     2521 ttaacttccc gctactcagc actcgagcag aacgatcgca cttacgaccg atccacccaa
     2581 gcaagcgcca cactacaccc ttcccaataa acaagggcgt ctgtgtcaga cgccactcta
     2641 tttcagatta aaccctatcg ttggcgtttc acagaaacgc cctacaattt cccttctaaa
     2701 caaaagcggc tccgaaattt taacgttccg aagccgctgg tgttattgcg ccaaaattat
     2761 tatggccttg gcgggggtgt tggttttggt ggtttttgtt tcccaccttc cggctgtcct
     2821 tgtgcctgcc cttgaccggc tgcggcaggc gcgccaccgg gctgccgctg cgggggctgc
     2881 tgatgctgtc gtggcggagg cggctggcct tgagcgctct gcattcgttc tctttgggcg
     2941 ggtgcggcac cggtggctcc accaccagga ggcgcggtga ccggttgccg aactccagat
     3001 ggcgcaccag ttccacgttg ttgacgttcc gcggcgccta aaggcgacgg cgtgccgaac
     3061 cgctgacgtt cga
//
LOCUS       DATDAJ010000357         6504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_1998181, whole genome shotgun sequence.
ACCESSION   DATDAJ010000357 DATDAJ010000000
VERSION     DATDAJ010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6504
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998181"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..169)
                     /locus_tag="VIS53_08890"
     CDS             complement(<1..169)
                     /locus_tag="VIS53_08890"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY5767936.1"
                     /translation="MNIGFVGVGRMGANMARHLKDRGFHVTAVYDTNRAVATELASEL
                     GCAAAQDLSEVT"
     gene            complement(166..555)
                     /locus_tag="VIS53_08895"
     CDS             complement(166..555)
                     /locus_tag="VIS53_08895"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY5767937.1"
                     /translation="MDKQELQGRTKQFALRVFKLVDALPRTPAGRAVANQLVRSATSV
                     GANYRAACRARSRAEFAAKLGTVLEEADESLYWLELIREGKLIAESKLSLLLTEAGEL
                     TAILAAGRKSAAANTSNIKHRKSYMAS"
     gene            complement(599..1417)
                     /locus_tag="VIS53_08900"
     CDS             complement(599..1417)
                     /locus_tag="VIS53_08900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY5767938.1"
                     /translation="MIPLEDNAGDIIGKGQRGLGISDSELAEKAGVNAQTIRKLREGD
                     FDESALLSLAPVLGLDARALGEIARDEWRPNKIESLDGLAQFTTDYNGMAVNAYLVWD
                     PAKRVATAFDTGADSREMVRFAKHHKLNVQLILLTHAHPDHVADLPGLREETGADVFT
                     PAREPVPGAEPIDEGKKFRLGDLQIDTRLTWGHSPGGITYVVTGLARPIAIVGDSLFA
                     GSMGGGNVSYRDALRNNVEKILTLPDETIICPGHGPMTTVGEEKQHNPFFAGRS"
     gene            complement(1589..2296)
                     /gene="lipB"
                     /locus_tag="VIS53_08905"
     CDS             complement(1589..2296)
                     /gene="lipB"
                     /locus_tag="VIS53_08905"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEY5767939.1"
                     /translation="MNGAGHLNVRWHGRMEFAAALELQEEIVAKKRNDPLFEDQLLLL
                     EHEPVYTIGRTPDRSSLSATGSRPSRDGESGSAHLPHPLFSINRGGQATYHGPGQLMG
                     YPIIDLRRCGQDLHKYLRWLEQVLINVLARYDIAAQRRESLTGVWVQNRKIASIGVGV
                     RHWITMHGFALNVCGDLSPFDHIVPCGINNVAMTSVEKETKKSFTVADVATAFEKIAS
                     RRISDLRVAEALSAVGA"
     gene            complement(2293..2796)
                     /gene="ruvC"
                     /locus_tag="VIS53_08910"
     CDS             complement(2293..2796)
                     /gene="ruvC"
                     /locus_tag="VIS53_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEY5767940.1"
                     /translation="MRVLAIDASLRNTGVAIVDANNGKPQSVYFGTIHNKSAMRPSSC
                     LVCIRDRLAELIREHAPDCCALESVIYVQSYKTAIILGAARGAAILAAAENGLPVFEY
                     SPKRIKQSTVGHGGAGKNQVAFMVRVLLGLTETPDADAADALAIGLTHVRMHEAAARG
                     LPGGIQI"
     gene            3173..3898
                     /locus_tag="VIS53_08915"
     CDS             3173..3898
                     /locus_tag="VIS53_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767941.1"
                     /translation="MAKVLKQVGRISDKRIASAATTIILLIAVAVASSSHATTGWVQV
                     ETPDLEPEGELALSFQLQNEKLGNPYQLQAEMGLTKWAEVAVFRGFDPDEWIFGTEVG
                     LRTEEPWLLSIGFENWSPHNNVDPQPYIVAGYYCNHHRIIAGATHVDYRHEALLAYAY
                     NFNDSWQVQVDWQSGSGNASTIGFTWNITPKLQITPAIFVTNDSPHEVLGFLTLSYTF
                     DFWTAKKDQVIGTNCMQRVAGVK"
     gene            3902..4435
                     /locus_tag="VIS53_08920"
     CDS             3902..4435
                     /locus_tag="VIS53_08920"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY5767942.1"
                     /translation="MEKASKSSRSRVSAGLLMFRRRNDEIEVLLAHPGGPFFVRKDDG
                     VWTIPKGEAAPGEDLLTRAQIEFEEEVGFRPENVQQWIELGWIQQKGGKIVHAWAFEG
                     DLPEPFECKSNLFELEWPPRSGKYQQFPEVDRACFFSDKAARRKLKSRQVPFLDRLCA
                     ALADRNTDPPRPRATNS"
     gene            4470..4799
                     /locus_tag="VIS53_08925"
     CDS             4470..4799
                     /locus_tag="VIS53_08925"
                     /inference="COORDINATES: protein motif:HMM:NF021193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PGPGW domain-containing protein"
                     /protein_id="HEY5767943.1"
                     /translation="MRSSIKRLFSRWHLDNIKVVRRVIVSVVGGTVVLIGIALLVLPG
                     PAFVVIPVGLAILATEYAWARRWLRKVRQVASDVVSGRQTTAFRDLVSSSSNSKDDKR
                     TADGVGH"
     gene            4903..5601
                     /locus_tag="VIS53_08930"
     CDS             4903..5601
                     /locus_tag="VIS53_08930"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HEY5767944.1"
                     /translation="MSTAPLVCNICKKSKSPHSGMIAELIRPSLLEFIKKKLPDLDSK
                     AFICFKDLGEFRKDYVKEVLEDEIGELSALDQEVIESLEQHEILSADISKQFERKLTF
                     GERLSDRIAEFGGSWKFLITFGAVILIWIAINGIMLATRAFDPFPFILLNLVLSCLAA
                     VQAPVIMMSQNRSEARDRLRAENDYKVNLKAELEIRHLHEKLDHLLRRQYNRLFEIQQ
                     IQIELLQEIGQHKR"
     gene            5653..>6504
                     /locus_tag="VIS53_08935"
     CDS             5653..>6504
                     /locus_tag="VIS53_08935"
                     /inference="COORDINATES: protein motif:HMM:NF026220.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HEY5767945.1"
                     /translation="MFRGKTVHLALSFVFYSSLTVFGQWSAANSGTTNNLNGAYLLDS
                     GIAFVVGDAGTILKSTDAGATWAPLLSGTTNTLYELYFFDANQGVVVGDQGLILRTTD
                     GGAMWQSVASGVEDALRSVFFNGANGTSGGDSQTILYSTDSGASWQISQSGFFGGGFP
                     GAHMLSPSIGFVAGQNSIFQPLVGATTDGGASWESHAFYFDKNEGGATDLRFLDVNTG
                     VVSGFVFDGRGAIARTTDGGVNWSTLFFDQPIEGVDFPVTNTTNFGFAVGWGGRILHT
                     TNMGIAWT"
BASE COUNT         1481 a         1739 c         1783 g         1501 t
ORIGIN      
        1 ccgttacttc cgacaaatcc tgcgcggccg cgcaaccaag ctccgacgcg agttctgtgg
       61 cgacagcgcg gttggtgtcg taaaccgccg tgacatgaaa accacggtcc ttcaggtggc
      121 gcgccatgtt agcgcccatt cgaccaactc caacgaatcc gatgttcatg atgccatgta
      181 agattttcga tgtttgatgt tcgatgtatt agctgccgca gattttcgcc cggccgcgag
      241 aatagcggta agttcgcccg cctctgttag caacagcgac aatttggact cggcaatcag
      301 ttttccttcg cggatcaatt cgagccaata caagctttcg tccgcttcct ccaaaactgt
      361 acccagcttg gctgcgaatt ccgcgcgaga tcgggcacga cacgccgctc gatagtttgc
      421 tccaaccgac gttgcactac gtacgagctg atttgcgact gcgcgaccag ccggcgttct
      481 cggaagcgca tcgactagct tgaagacacg aagcgcgaat tgctttgtgc ggccttgaag
      541 ttcctgcttg tccaccgcgc cgattctaca tcatccatct tacatctgaa atcaaacatc
      601 agctacgtcc tgcgaagaac ggattgtgct gtttctcctc gcccacagtg gtcatcgggc
      661 cgtgcccggg gcagatgatc gtttcgtcag gcaatgtcag gattttctcg acgttgtttc
      721 gtaaggcatc gcgatacgac acattgccgc cgcccatcga gccggcaaaa agcgaatcgc
      781 ctacaatcgc gattggacgc gcaagcccgg tcaccacgta cgttatgccg ccaggggaat
      841 gaccccacgt caggcgcgta tcgatttgta aatctccaag tcgaaacttt tttccctcgt
      901 caatgggctc ggcgccaggc actggttcgc gcgccggggt aaaaacatct gcgccggttt
      961 cttcgcggag acccggcaga tccgccacgt gatcgggatg cgcgtgcgtg agcagaatca
     1021 gttgcacatt cagcttatgg tgcttcgcaa agcgcaccat ctccctggaa tcggctccag
     1081 tgtcgaaggc tgttgccacg cgctttgccg ggtcccacac aagatacgcg ttaacggcca
     1141 tgccgttgta atcggtggtg aattgcgcga ggccatccaa cgattcgatc ttgttcggac
     1201 gccattcgtc ccttgcaatt tcgccaaggg cgcgtgcatc caagccaaga accggcgcaa
     1261 ggcttagcag cgccgattcg tcgaaatcgc cttcacgcag cttccgaatt gtctgcgcat
     1321 tcactcccgc tttttcggcc agttcagaat cggaaatgcc gaggccgcgc tgcccttttc
     1381 cgatgatgtc gccggcgttg tcttcgagtg gtatcatggc ttcgccacgt taaatcgttg
     1441 aagcattaaa ccgttaaaac gcaaatccga tgtaacgatg tagccattta acgagtcacg
     1501 ccagctgttt gcgcagtgcc aatttctcaa cagctcgtgc cgctcctaaa ggagctgatt
     1561 gtgtcgtaag ccaccgtgac tataaacatc acgcgcctac ggcgctcaat gcttcagcaa
     1621 ctcgcaaatc agaaattcgc cgggacgcga tcttttcaaa ggcagtcgca acgtcggcaa
     1681 cagtgaacga ttttttcgtt tccttttcca cggatgtcat tgcgacgtta ttgattccgc
     1741 acggaacaat atgatcaaaa ggcgagagat cgccgcacac gttcaacgcg aacccgtgca
     1801 tggtaatcca atggcgaacg ccgacaccga ttgaagcgat cttgcgattt tggacccaca
     1861 ctcctgtgag cgattcgcgt cgctgcgcgg caatgtcgta tcgggcgaga acattgatga
     1921 gcacttgctc tagccagcgc aggtatttgt gtaaatcctg gccgcatcgc cgcagatcga
     1981 taatcggata acccatcaat tggcccggcc cgtgatacgt cgcttgcccg ccgcggttga
     2041 ttgaaaagag cggatgcggc aaatgcgcgc tgcctgattc gccatcccga cttggtcggg
     2101 atcctgtagc ggacaagctg gatcgatcgg gcgtgcgccc aattgtgtaa acgggttcgt
     2161 gttcgagaag aagcaactga tcttcgaaca aagggtcatt tcgttttttc gccacaattt
     2221 cttcctgcaa ctcaagtgca gctgcgaatt ccattcgccc gtgccagcgc acgttaagat
     2281 ggccagctcc attcatattt gtattcctcc tggaagaccg cgcgccgctg cctcatgcat
     2341 gcgcacatga gtaagaccga tcgccagcgc gtctgcggcg tcggcatccg gcgtttcggt
     2401 tagaccaagc agcacgcgca ccatgaacgc gacctgattc ttgcccgctc cgccgtgccc
     2461 gacggtcgat tgtttgattc gcttcggcga atattcaaat actggcaatc cgttttcggc
     2521 agcggcgaga atggccgcgc cgcgcgccgc gccgaggatg atggcggtct tatagctttg
     2581 cacgtaaatc accgattcga gggcgcaaca atccggtgcg tgttcgcgaa tcaattcggc
     2641 gagtcgatcg cggatgcaga ccaggcagga tgagggacgc atcgcactct tgttgtggat
     2701 ggttccgaaa taaacagatt gcggcttccc attgtttgcg tcgacgattg cgacaccggt
     2761 gttgcgcaaa gaagcgtcga tagcaagcac ccgcattatc gaaaccttaa aatcgcgtag
     2821 cgcgtgttca accggaaagc tgccgcgtac gtatttagca gatgttcagc gccaacgggg
     2881 cgtctcactc ccgagcctag ggcaacgccc caggattcgt gtaatgaaaa tccagcagcg
     2941 ctgaagacgc gattcatttc cgacacgagt tcgatgatcg gctgctggtt gaaccgcgct
     3001 ttcagcgctt gttgctgctg taatcgaacc cctggggcga cgccccgggc tgaagttgaa
     3061 gtcgcgcctt cggcgctaag cacatacggg aaggaggagg tgtgccaaac aacgcgttca
     3121 cgctcaacag cgaatcgaca aattcccgag caaccgtttt actcgcgtca gcgtggcgaa
     3181 ggttctcaaa caggttggca gaatcagcga taagcgaatc gcctccgccg cgaccaccat
     3241 aatactactc atcgcggttg cggttgcttc ttcgtcccat gctacaacgg ggtgggttca
     3301 ggtcgagacg ccggatttgg aaccggaagg cgagcttgcg ctaagcttcc aattgcagaa
     3361 cgagaaactc ggcaacccat atcagctgca ggcagaaatg gggttgacca agtgggcaga
     3421 ggtcgccgtc ttcagaggat tcgaccccga cgaatggatc ttcggcacag aagttggatt
     3481 gcggacggaa gaaccatggc tgctctcgat tggttttgag aactggtcgc cacacaacaa
     3541 tgtcgatcct cagccgtata tcgtggcggg ttattactgc aatcatcaca ggattattgc
     3601 tggcgcgact cacgttgatt accgtcacga agcgcttctg gcttacgcct ataattttaa
     3661 tgactcctgg caggtgcaag tcgattggca gagcggttcg ggcaatgcat cgaccatcgg
     3721 gtttacgtgg aacattactc ccaagctcca gattactccc gctattttcg tgaccaacga
     3781 cagtccgcat gaagtgctgg gctttttgac tttgagttac acatttgatt tctggacagc
     3841 caaaaaagat caagtgatcg gcacgaactg catgcagcgc gttgcgggcg taaaatgaat
     3901 tgtggagaaa gcctcaaaat cttcgcgaag tcgggtcagc gcaggtctgc tgatgtttcg
     3961 ccgcaggaat gatgaaatcg aagttctgct ggcgcacccc ggcggacctt ttttcgttcg
     4021 caaagatgac ggcgtatgga caattccaaa aggtgaagca gctcccggag aagatttact
     4081 gacgcgtgct caaattgagt ttgaagagga agtgggattt cgtcctgaaa atgttcagca
     4141 atggattgag ctcggctgga tccagcaaaa aggcggcaaa attgtgcacg cctgggcatt
     4201 cgaaggagat ttgcccgaac cattcgagtg caaatcaaat ctgttcgagc tggaatggcc
     4261 gccgcgttcg ggcaaatacc aacaatttcc agaggtcgat cgggcttgct tcttctccga
     4321 caaagccgcc aggcgcaaat taaaatccag gcaggttcct tttcttgatc gtttgtgcgc
     4381 tgctcttgcc gatcgaaata cggatccgcc caggccgcga gcgacgaatt catgagaggt
     4441 cgcccgcgca cccggacggc gaactactta tgaggtcttc gatcaaacgc ttgttcagcc
     4501 gttggcatct cgacaacatc aaagttgtca gacgtgtgat tgtgtccgtg gtcggcggaa
     4561 ccgtcgtgtt aatcggaatt gccctgcttg ttttacccgg gccagcgttc gtcgttattc
     4621 cggtggggct cgccatccta gcgacggaat atgcgtgggc gcgacgctgg ctcagaaaag
     4681 ttcggcaagt tgccagtgat gttgtttctg gtcgccaaac cacggccttt cgcgatctcg
     4741 tctcatcgag tagcaacagt aaagacgaca agcgcacagc cgacggcgtg ggacactagg
     4801 cgagtcgacc aaagatgcgc tgaggacagc gcacgctaaa gacgctccga agacggaatc
     4861 gacaagccgg tcagaagcgg tttaattcgg cagcgaatcc cgatgagcac cgcaccactg
     4921 gtctgcaaca tttgtaaaaa gtcgaagtcg ccacacagcg gaatgatcgc cgaattgatt
     4981 cggccgtctc tgctggagtt cattaagaag aaattgcccg atctcgacag caaagcgttc
     5041 atctgcttca aagatctggg cgagtttcgg aaggattacg tcaaggaagt tttggaagac
     5101 gagattggcg agctttccgc gctcgaccag gaagttatcg agagcctcga gcagcatgag
     5161 atcctttccg ctgacatcag caagcaattc gaaaggaaac tcacgtttgg cgagcgactc
     5221 tccgaccgaa tcgccgaatt cggaggcagc tggaaatttc tgatcacgtt tggggcggtg
     5281 atcctcatct ggatcgccat caatggcatc atgctcgcga cacgcgcgtt cgacccattt
     5341 ccatttatat tgctaaatct ggttctatcc tgcctggctg cggtgcaggc gccggttatc
     5401 atgatgagtc aaaaccgttc cgaggcgcgc gaccgattgc gggcggaaaa cgattacaag
     5461 gtgaatttga aagctgagct cgagatccgg catttgcacg agaaactcga tcacctcttg
     5521 cgtcgtcaat ataatcggct attcgaaatt cagcagatcc agattgagtt gcttcaagaa
     5581 attgggcaac acaaacggta gctgtttcgt tgattgggaa tcagggatta atcaatcaac
     5641 gggaggtaat tcatgttcag gggtaagaca gttcatctcg cattgtcatt cgttttctac
     5701 tcgagcctaa ccgtctttgg tcaatggtcc gctgctaatt cgggaacaac gaacaacttg
     5761 aacggcgcct atctgctcga ttcaggaatc gctttcgtag tcggcgatgc cggcacgatt
     5821 ttgaaaagca ctgatgccgg agcgacgtgg gcgccgcttc tgtcggggac cacaaacact
     5881 ttgtacgagt tgtacttttt tgatgctaat cagggcgtcg tagttggaga ccagggattg
     5941 attctgcgta ccaccgacgg aggggcgatg tggcagagcg tggccagcgg cgtggaggac
     6001 gcgcttagat ccgtcttctt taatggcgca aacggaacgt cgggtggcga ttcgcaaaca
     6061 attctctact cgactgattc cggcgcctcg tggcaaatca gccaaagcgg gtttttcggc
     6121 ggcggatttc caggcgctca tatgctgagt ccaagcatag ggtttgtggc cggacaaaat
     6181 tcgatctttc aacctttggt gggggctacg accgatggcg gtgccagttg ggagtctcac
     6241 gcattttatt ttgataaaaa cgaaggcggc gccactgatc tccgtttcct cgatgtaaat
     6301 acgggtgtcg tctcagggtt cgtttttgac gggagaggag cgattgcgag gaccaccgac
     6361 ggcggtgtga attggtcgac actcttcttc gatcagccaa tagagggtgt tgatttccca
     6421 gtaacaaata caacaaactt tgggttcgcg gtgggctggg gcggacgaat cttgcacacc
     6481 acaaatatgg gaatcgcctg gacc
//
LOCUS       DATDAJ010000358         5935 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2000302, whole genome shotgun sequence.
ACCESSION   DATDAJ010000358 DATDAJ010000000
VERSION     DATDAJ010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5935
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000302"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /locus_tag="VIS53_08940"
     CDS             complement(<1..944)
                     /locus_tag="VIS53_08940"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEY5767946.1"
                     /translation="MALLSHAVGRTERLSAWNEVFALVLLFAGTLLFFALISYTPNDI
                     PSWLWFSHVSPANHPAQNFIGPLGAIVAGICYQLIGVFASLLLAAVLLGFGAAKLFYP
                     RLRFVPRIPWIVLFLISGACLDQAWGITHLLGRTVPVDIQGPGGLIGYRLSDEHRGLL
                     PAALGPVGSVLLLVAVYLTTLILVTGLRPIHLVREMVNLSRRSVAKLYEWRVRRTIRK
                     SDLKEQLKTQKGRRALEALQKQLKKKGVPVPEPVATMISPDELANRPAPKVVDTTVPS
                     TEPVASRRRPSLAELRASEEKSKAAPSPSSATSSWEDYV"
     gene            1377..2801
                     /locus_tag="VIS53_08945"
     CDS             1377..2801
                     /locus_tag="VIS53_08945"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POT family MFS transporter"
                     /protein_id="HEY5767947.1"
                     /translation="MASHKYMRSPPNLAGMPPGVPYIIGNEAAERFSYYGMKSVLTVF
                     MAHYILNHSGVLAPMQENEAYMYTHYFVFGVYFLPILGAILADGWLGKYRTILSLSIV
                     YCLGNLTLACMATSWGIAIGQRTMLAIGLFLICLGAGGIKPCVSANVGDQFGESNKHL
                     LSKMFGWFYFSINAGSFISSILCPWLLANPKWGPGWAFGIPGIAMVIATLFFWGGRKK
                     MVHVPPAGLGYLKETFSKEGLLTLGRIAMVYVFILVFWALWGMSNGAEWTLQAEKMDL
                     HWMGMNLIAAQVQTANPILILIFIPIVNYVIYPAIDKVFRLTPLRKIGIGLYITALSF
                     VVIIWIQGQIDAGLKPSINWQLLAYVILTLGEAMVSITGLEFSYTQAPNSMKSSVMAL
                     WLLTVASGELFVGLVNKWILHAGGAQKVSAYQYFTFFTWLMFGAAIVFTIVACFYKGR
                     TYLQSQLTPDEVATEPILHGGTPS"
     gene            2808..4535
                     /locus_tag="VIS53_08950"
     CDS             2808..4535
                     /locus_tag="VIS53_08950"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEY5767948.1"
                     /translation="MKIIIAVAAALSLSISNTFGTSQDDAFQKVAHDYVEQYLQANPE
                     QATELGDHRFDGELTDHSAGARAKDLATQKEFRDKLNAIDGSQLTGANNIDFRILKEN
                     IDYEIFRAEELKEPEWNPLVYMQSLANSLYLLVARDFAPAEKRIPSLRQRLEKIPGVI
                     AQAKANLQHSPRIHTETAIEQTQGAINLVRAELAPLLDQAPQMKKDLAPLQDKTAAAL
                     EDYKKWLQNDLLPRSDGDFRLGGQKYRKKLRFALASDLPMEEILKRAKADLEQTQTAI
                     YETALPLYKKYFPNADQQTVADKHKVTAAVLDKLAEQHPNDATVVDYAKKVVTEATDF
                     VKRHDVVNVPIVLLDVIAMPEFKHGVAIAYCDAPGPLEKNGKTFFAVAPTPKDWSKER
                     KESFFREYNNYMIRDLTVHEAMPGHFLQLARSNEFRAPTLVRAIFQSGPFIEGWAVYC
                     EQVMAEQGYGGPEVKMQQLKMRLRAICNAILDQSIHAGNMSEKEAMDLMTKEGYQQEG
                     EAVAKWKRARLTSAQLSTYFVGATEHLDLRAAEQKKLGDQFNLKKYNDQVISYGSPPV
                     KYVRELIGL"
     gene            complement(4600..5877)
                     /locus_tag="VIS53_08955"
     CDS             complement(4600..5877)
                     /locus_tag="VIS53_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767949.1"
                     /translation="MKDRRTERDTHGLRLRTLGATPPRAVIGLEAEFNLFVNGRRRRP
                     EKVFGDPSRLVRRRMIPRTGKSFQLPAGGAIYFDTGVIEVATPIVEFEPGCCYRATCL
                     LWEQIRYLRRELDHWARRHKCQCTLQGFSTHYNFSFLTAQNSELRNARTLAYLLAHIL
                     PVPVILLATNRQSSAVGVRPRGNRVEVTVDFTPDAALMLATTAFIAGTMGTVLRWGDF
                     RLRQLGRHGLPRIARFHLRKHSSRRGWRVTADSLGRNPFTSDINESLWKLRDDRTLSL
                     RAIAAESLRPFRQRIRRISDSSTLEHIAAVFAGDARSLLDFEKRPDVYDDVGHGIDWG
                     RRRMRRWPRSKYEKVIHRVIAREPMRIGQKRYRVDRMNGWYQIDFREVGTKRRRTFNL
                     DELVRMSAARKPAAVASRKRKPAKKAPRRKRLN"
BASE COUNT         1357 a         1658 c         1609 g         1311 t
ORIGIN      
        1 acgtaatctt cccagctgga agtggcactg ctcggactgg gggccgcctt cgatttttct
       61 tcacttgcgc gcagctccgc gagagaaggt ctgcgccgac ttgccaccgg ctcagtcgac
      121 ggcactgtcg tatcgacgac tttcggcgcg ggccgattcg ccagttcatc cggcgaaatc
      181 attgtcgcta caggttcagg cacaggaacc cctttctttt tgagttgctt ctgtagcgct
      241 tcaagcgccc tccgcccctt ctgggtcttc agttgttcct tgagatccga ctttcgaatc
      301 gttcggcgca cgcgccattc gtacagcttc gccacgctcc ggcgcgaaag gttgaccatc
      361 tcgcgaacaa gatgaatcgg gcgcaaaccc gtaaccaaaa tcagcgtggt caaataaacc
      421 gcgacgagga gaagaaccga accgaccggt ccgagagcgg caggaagcag gccgcgatgt
      481 tcatcggaca atcggtaccc aatgaggccg cccggccctt gaatgtccac cggtactgtc
      541 ctcccaagca agtgtgtgat cccccaggct tgatcgaggc acgcaccaga gatgagaaac
      601 aaaacgatcc acgggatccg cggcacgaaa cgcaatcgag gataaaataa tttcgcggcg
      661 ccgaatccta gcagaaccgc tgccagtaat agcgaagcga agacgccgat taactgatag
      721 caaatgcctg caacgatcgc tccaagcggc ccgatgaaat tttgtgcagg gtgattcgcc
      781 ggtgaaacgt gactaaacca gagccacgac ggtatatcgt tcggcgtata ggaaatcagc
      841 gcgaaaaaca gcaacgtgcc ggcaaaaagc agaacgagag cgaacacttc gttccatgcg
      901 ctgagtcttt ctgtgcggcc caccgcgtgt gatagtaatg ccatgcaggc gtctttcaat
      961 cacaactctt cctctgcctc ttgctcttac tcgtgctcat gctcatgctc atgctcttgt
     1021 tcgtaatcgt gatcgtgatc caacgattcg gcgcgcccgg cccgcgtacg gcgggtaaac
     1081 tgggtcgcgc cttaccactg cgctttcatc cttgcgcatg gcggcggaga ctgataactg
     1141 tgccagcgca ttatgggttc cttccttcgc cagggcatcc tcgctgtttt ctttgcgacg
     1201 gccctgtttt ccacttcttg cgaaaaacac ccgatcggcc agatgccgga agttcagagg
     1261 gaacaaccgg atccggcaaa ggtctggtcg gatgcgccag aacactctga gggacattcg
     1321 acttcagaga ccccggctga agttccacac gaagctcgtt aggcaaagga gatcacatgg
     1381 ctagccacaa atacatgagg tcaccaccga acctggccgg gatgccgccg ggggttccct
     1441 acatcatcgg caacgaagcg gctgagcgtt tctcctacta cggcatgaaa tcggtcctga
     1501 ccgttttcat ggcgcattac atcctgaacc attcgggtgt gctggcgccg atgcaggaga
     1561 acgaggcgta catgtacacg cattatttcg tgttcggcgt ctatttcctt ccaattctcg
     1621 gcgcgatttt ggccgacggt tggctcggca aatatcggac gattctgtcg ctttcgatcg
     1681 tttactgcct gggcaacctc acgctcgcgt gcatggccac gtcgtgggga atcgcgattg
     1741 gtcaacgcac aatgctagcg atcggattgt tcctgatttg tttgggcgcc ggcggcatca
     1801 aaccatgcgt gtcggccaat gtgggcgatc aatttggcga atcgaacaaa catttgctct
     1861 ccaaaatgtt tggctggttt tacttctcca tcaacgccgg ctccttcatc tcttcgattc
     1921 tttgtccatg gctccttgcg aatccgaagt gggggcccgg ctgggcgttt ggaattcccg
     1981 gcatagcgat ggttatcgct actttgttct tctggggcgg tcgcaagaaa atggtgcacg
     2041 tgccgcctgc cggccttggt tatttgaaag agacattcag caaggaaggt ctccttacgc
     2101 ttggccgaat cgcgatggtt tacgttttta ttttggtctt ctgggcgctt tggggaatga
     2161 gcaacggcgc tgaatggacg ttgcaagccg agaaaatgga cctgcattgg atgggcatga
     2221 acttgatcgc tgcccaggtg caaaccgcaa acccaattct cattttgatt ttcattccga
     2281 tcgtgaacta cgtgatctat ccagcgatcg acaaggtttt ccgactcacg ccgctccgca
     2341 aaattgggat cggcctttat atcacggcgt tgtcgtttgt cgtgattatt tggatccagg
     2401 gacagatcga cgcgggactg aagccgagta ttaattggca attgctcgct tacgtcatcc
     2461 ttacgcttgg tgaagcgatg gtttcgatca ccggactgga attttcctac acccaggcgc
     2521 cgaattcgat gaagagctcg gtgatggcat tgtggctgtt gactgtcgct tcaggcgaac
     2581 ttttcgtcgg gctcgtcaat aaatggatct tgcacgcagg tggcgctcaa aaggtcagtg
     2641 cttatcagta ctttaccttt ttcacctggt tgatgttcgg agcagctatt gttttcacta
     2701 tcgtggcttg cttttataaa gggcgcactt acctgcaatc acagctcacg cccgatgaag
     2761 ttgccaccga acctattctt cacggcggca caccgagctg aggtcgaatg aaaatcatta
     2821 tcgcggtcgc ggccgccttg tcgttgtcga tttcaaacac atttgggacc tcgcaagacg
     2881 acgctttcca aaaggttgcc cacgattacg tcgaacaata tttacaggcc aatcccgagc
     2941 aggcgactga gctcggcgac catcgtttcg atggtgagtt gaccgaccat tcggccggag
     3001 cgcgagcgaa agacctcgcc acgcaaaaag aatttcgcga caagctgaac gccatcgatg
     3061 gatcgcaact gacgggcgcc aacaatatcg attttcgcat cctcaaagag aacatcgatt
     3121 acgaaatctt ccgcgccgaa gagctgaagg agccggagtg gaatccgttg gtttacatgc
     3181 agagcctggc caacagcctc tatcttttgg tcgcgcgcga tttcgcgccg gccgaaaaac
     3241 ggatcccgag tttgcgccag cgcttggaaa agatcccggg cgtcatcgcc caagcgaaag
     3301 caaatctgca acattcgccg cgcattcaca ccgagaccgc gattgagcag acacagggcg
     3361 caatcaatct cgtgcgggca gagctcgccc ctctactgga tcaggcgccg caaatgaaga
     3421 aggacctggc cccgttgcag gacaaaaccg ctgcggcgct cgaggactat aaaaaatggc
     3481 tccagaacga tctgctcccc cgctccgacg gcgatttccg tctcggcggg cagaagtaca
     3541 ggaagaaact gcgcttcgca ttggcgtcgg atttgccgat ggaagaaatc ttgaaacggg
     3601 caaaggccga cctggaacaa acacaaaccg ccatctacga aacggcgttg ccgctttaca
     3661 aaaaatattt tccgaacgcg gatcaacaaa ctgtcgcaga caaacacaaa gtgacggccg
     3721 cggtgttgga caagcttgcg gagcaacatc ctaacgacgc cactgtggtt gattatgcga
     3781 agaaagttgt cacagaagcg acagatttcg tgaagcgaca cgatgtggtc aacgttccaa
     3841 tcgtgctgct agacgtgatc gcaatgccgg aatttaaaca tggcgtcgcc attgcctatt
     3901 gcgatgcgcc ggggccactt gagaaaaacg gcaaaacatt tttcgccgtc gcgcctacgc
     3961 cgaaggattg gtcgaaagag cggaaggaat cgttcttccg ggaatacaac aactacatga
     4021 ttcgcgatct gaccgtgcat gaggcgatgc cggggcattt tctgcaactc gcgcgctcga
     4081 atgaatttcg cgcgccgacg ctggttcgcg caattttcca gagcggcccc ttcattgagg
     4141 gctgggcggt ttattgcgag caggtgatgg cggaacaggg atacggcgga cccgaggtta
     4201 agatgcagca attgaagatg cggctacgcg cgatctgtaa cgcaattctc gatcaaagca
     4261 tccacgccgg aaacatgagt gaaaaggaag cgatggattt gatgaccaaa gaaggttacc
     4321 agcaggaggg cgaagcggtg gcgaaatgga aacgcgcccg gcttacttcg gcgcagttat
     4381 ccacctattt cgtaggcgcc acggaacatc tcgatttgcg cgctgccgaa cagaaaaaac
     4441 tcggcgacca gttcaatctc aaaaaataca acgatcaggt catctcttac ggcagcccac
     4501 ccgtgaaata cgtgcgggaa ttgataggct tgtagatgta gccaccggcc tgtggccggt
     4561 ccaactctga acggcccaca gggctacagc agacaccgct taattcaggc gctttcgacg
     4621 cggggctttt ttggcaggct tgcgtttccg tgacgcaacg gcagctggct ttcttgcagc
     4681 cgacatccgt accaattcat cgagattaaa cgttcggcga cgtttggttc ccacttctcg
     4741 aaaatcgatc tgataccagc cgttcatccg atctacccga tagcgtttct gtccaatacg
     4801 catcggttcg cgtgcgatca cgcgatggat gactttttcg tatttggacc gtggccagcg
     4861 tcgcattcgg cggcgacccc aatcaattcc atgcccgacg tcgtcataaa cgtcggggcg
     4921 cttctcgaag tcgagaagcg agcgcgcatc gccggcgaac accgcggcga tgtgctccag
     4981 tgtgctcgaa tcactgattc gtcgaattcg ctggcgaaac ggccgcaaac tttcagcagc
     5041 aattgcgcgc aggcttagcg ttcgatcgtc acgcagtttc caaagcgact cgttgatatc
     5101 agatgtgaat ggatttctgc ctaacgaatc agcggtgacg cgccaaccgc gtcgcgacga
     5161 atgttttcgc agatgaaatc gcgcgatgcg agggagtccg tgccgcccca attgtctcag
     5221 acgaaaatct ccccaacgca gcaccgttcc catggtgccc gcgatgaacg cagtcgtcgc
     5281 cagcatcaac gcagcatccg gcgtgaaatc aactgtgact tcgacccggt ttccgcgcgg
     5341 gcgcacaccg actgcgctgc tctgccggtt cgttgccagc aaaatcacgg gcaccggcaa
     5401 gatgtgtgcc agcagatatg caagcgtcct ggcatttcga agctcggagt tttgcgcggt
     5461 tagaaacgaa aaattgtaat gcgtgctgaa accctgaagc gtgcactgac atttgtgtcg
     5521 cctggcccag tgatccagct cccgtcgcag atagcggatc tgctcccaca acaaacacgt
     5581 cgcgcgataa caacagcccg gctcgaattc gacgatgggg gtggcgactt cgatcacacc
     5641 ggtgtcgaaa taaattgcac cgccggcggg caattgaaac gatttgccgg tgcgcggaat
     5701 cattcgccgt cgcaccagcc ggctgggatc accaaagact ttttccggac gccgtctgcg
     5761 gccgttaacg aaaagattaa attccgcttc caacccgatc accgctcgcg gcggtgttgc
     5821 cccaagcgtg cgaaggcgaa gaccatgcgt gtcgcgttct gttcggcggt ccttcatcgg
     5881 ctcaacgtga gattaactcg cttcgctgca ttcgcgcgga gttaacctca cgtat
//
LOCUS       DATDAJ010000359         8744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2008025, whole genome shotgun sequence.
ACCESSION   DATDAJ010000359 DATDAJ010000000
VERSION     DATDAJ010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8744
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2008025"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VIS53_08960"
     CDS             <1..355
                     /locus_tag="VIS53_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEY5767950.1"
                     /translation="KLGSKSGRENWESIIEFMAGKKPSECHQDERDAPGTEKSIAIVY
                     QGVDAVRKIRDVLGPTDPAKAPPGSIRKEFGQTIMVNAAHASDSVENAKREMAIIRVE
                     ENNFKPLIENFYRRQ"
     gene            389..1552
                     /locus_tag="VIS53_08965"
     CDS             389..1552
                     /locus_tag="VIS53_08965"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY5767951.1"
                     /translation="MEISERAAQLTPSLTLSIDSKAKAMKAEGIDVCGFGAGEPDFDT
                     PEHIKRAAIEALEAGFTKYTPSAGIPELRQAIADKLAADNGLTYRAGQVVVSNGAKHA
                     CYNAILATCQPGDEVIIPAPYWVSYPDMVRLVGAEPVIVPTSERNAWKMRPEDFENAM
                     TPRTKMLIMNSPGNPTGSVYTREELEAIVSVAAEEDIYVLSDEIYEKLVYDDVKHVSI
                     ASLSKEAYDLTITINGFSKSYAMTGWRLGYLAAPDAVARAVDSIQSHTSSNPSSFSQY
                     GALAALKGDQQPLADMREEFDMRRNYMFDRLSKISNITAVKPQGAFYILVNISQLGLT
                     SQNFADRLLSKANVAVVPGAAFGDDRTIRFSYATSLDVIKKGLDRFQDFCRTL"
     gene            1680..3260
                     /locus_tag="VIS53_08970"
     CDS             1680..3260
                     /locus_tag="VIS53_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein
                     domain-containing protein"
                     /protein_id="HEY5767952.1"
                     /translation="MPGHFALILHAHLPFVRHPEHEHFIEEEWLFEAITETYIPLLRM
                     MQRLIDDFVPFKLTMSITPTLCAMLQDRLLCERYVQHLHLLIDLAARERKRNRKHPQL
                     YELAEFYIDLFSETHRHFVDEWKCDLLSIIRELRQTGALEIIASAATHGVLPILQQQS
                     PRAARAQVLIGRDIYVELFDGEPAGVWLPECAYAPGLESILQEANLRWFVLDAHGLLF
                     GTPRPCRSIYAPCYTPAGPAAFARDPQVSRQVWSAHEGYPGDPAYRDFYRDIGFDLPM
                     EDLGAIARGTRKFSSVKYHRITGPGDEKQLYDRTAAENAAAQHAIHFFEQCREQIREV
                     GEPGFDPIIVAPFDAELFGHWWFEGAMFLEQFIRHAANERDFRLTTPSEYLATHPTQQ
                     IVEPAASTWGENGHLGVWLDPSNAWIYPQLNAAALRMCEVAEGYEEGGSNMTDTCDRV
                     LKQLARELLLAQSSDWAFLMKTGTAREYATQRTLDHLARFNRLHDQFVTNDLDEEFLR
                     DCEWRDNIFPNVNWRYYA"
     gene            3253..4023
                     /locus_tag="VIS53_08975"
     CDS             3253..4023
                     /locus_tag="VIS53_08975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767953.1"
                     /translation="MLKSKIAGRPFQIVTLVFCVAFAATAAAQESPTPTPSPASGESP
                     SPSISPEQSVPPSPTPEQTPSPSPARSVRISFIPPPMDGTISLGIYDQAGKIVRVLHQ
                     NAQLNDFTIGPDSLVTRWDGKDDWQQDMPPGRYHARGYLVGPLKREDLGETSSPSQIE
                     ANVVKVRLVRNPLRKDKRPVIDLGIGFNSEGSYLKTSDSLPLFKVSETSNVTRADIAA
                     KSENVVDIWQDDGTSVHQFRVSNVDQMMAFDCGEFELK"
     gene            4109..5431
                     /locus_tag="VIS53_08980"
     CDS             4109..5431
                     /locus_tag="VIS53_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP
                     dehydratase"
                     /protein_id="HEY5767954.1"
                     /translation="MPSTPEFQQTVGKVAGFTGTALHTGEKATLRLHPAPVDHGIKFK
                     RKDLQDEPTIDAKIENLKTVERSTTIGEGSVRVHTVEHVLAALAAMGVDNAIVEMDAN
                     EPPIGDGSAQPYVDLIKKAGVAAQEEPRKFFDVREPMHVEVKTGALLVLLPDDKFRIS
                     CTQAGPNNQFTQFLSLEITPSIFECEIAPARTFVYYEDVEPLMDKNLIKGGSLENAIV
                     VRGEAILSKEPLRFSDEFVRHKILDIIGDLALVGRRIRGHVVAVKPGHSANAELARAL
                     AREQTRRTAMSASRAIPIGDSGLDTGEVMKVLPHRYPFLMVDRVIGFEGENKITAIKS
                     ITINEPFFQGHFPGHPVMPGVMQVEAMAQVASILLFKLTKTTSRVGYFMSADEVKFRK
                     PVFPGDTIFIHAELTRARGNRMAKTKCYCVVNDAVVSEGELMFTFLDK"
     gene            5565..6344
                     /gene="lpxA"
                     /locus_tag="VIS53_08985"
     CDS             5565..6344
                     /gene="lpxA"
                     /locus_tag="VIS53_08985"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEY5767955.1"
                     /translation="MSDVQIHPTAIVDPAAELGAGTIVGPYCVIDSNVVLGPDCWLQH
                     HVTLCGPMKAGAKNKFYAYCSIGQQTQDLKYRGEPTYLEIGDENTFREFVTVNRSTTS
                     EGKTRIGNSGNFLAYSHIGHDCSVGDHVVFSNNGTLAGHVQVGNNAVMGGLTAVHQFC
                     RIGRFAITGGCSKIVQDVPPFMIADGNPAEIRGVNLIGLERKNYPPESVKLIKEAFRL
                     IYRSKYNRRQAIEAMQKELPQTEEITELIQFIEKSERGITR"
     gene            6536..6784
                     /locus_tag="VIS53_08990"
     CDS             6536..6784
                     /locus_tag="VIS53_08990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767956.1"
                     /translation="MKTITMLEFRQNAQSVLRRIAKGERFVLSHRGKRAARLEPLTTA
                     SDNVSSNDPFLTIGSRAMASPKGKTRHTDIDRIVYGGS"
     gene            6771..7190
                     /locus_tag="VIS53_08995"
     CDS             6771..7190
                     /locus_tag="VIS53_08995"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HEY5767957.1"
                     /translation="MAAVEVFVDTAGFLALWDAGDAHHRPALRLQQELARKRRHFLTT
                     EYVADETITLLLARHSYRVATDFLDTIERSEALRLEWIDPARFHAAANWFRKHNDKEW
                     SFTDCVSFAVMRELRIRDAFTTDHHFQQAGFNPLLKA"
     gene            7351..>8744
                     /locus_tag="VIS53_09000"
     CDS             7351..>8744
                     /locus_tag="VIS53_09000"
                     /inference="COORDINATES: protein motif:HMM:NF024867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5767958.1"
                     /translation="MSAVLTLLRIRNLALVEELEWQLGAGFVAVTGETGAGKSIIIGA
                     LQLLLGERADKSLIRTGADLCTVEAIFSGAELQKLNPTLTEAGVEPCEDDLILKRTLS
                     STGTNRQFINGSPTTLSVLKNLGDELVDLHGPHDHQSLLSPDRQLSLLDSFARAEPQL
                     EEYQALYRQLQTLLAEHAALNTAETAREQELDLLRHQITEIKSAKLVGSEEEEIDKRY
                     KLASNSKRLIELASAIANKLSEADDSVLLQLAETQRLLRELEKIDSSVAQFSTAHAAA
                     VVELSEIARTLSTYVEKFDLDPEQLVALEQRVSLFETLKRKYGGSIADVIAFGDRAAE
                     RMRKIEGRDAELERLTKDIENVRSQMNRTGEALRKSRLKFAPKLSENIRRNLRDLGFR
                     QSEFEAKLSALDDPRPNGFDSVELLFSPNPGEPLKPLRAIASSGEISRLMLAIKSALA
                     VHDAIPLLVFDEIDT"
BASE COUNT         2147 a         2373 c         2316 g         1908 t
ORIGIN      
        1 aaagcttggt tcgaaaagcg gccgcgaaaa ctgggagagc atcatcgagt ttatggccgg
       61 caaaaagccc agcgaatgtc atcaagacga acgcgatgcg cctggaacgg agaaatcgat
      121 tgccattgtt taccagggcg tggacgcggt gcgcaaaatt cgcgacgtcc tcggccccac
      181 tgatccggca aaagcgccgc cggggtccat tcggaaagag ttcggacaaa cgattatggt
      241 taacgccgcg catgcgtcgg attccgtcga gaacgcgaaa cgcgaaatgg cgatcattcg
      301 agtcgaagaa aataatttca aacctctgat tgaaaacttc taccgtcgcc aatagtatgc
      361 gctcccattt gtggaccact tgattgccat ggaaatttct gaacgcgccg ctcaactgac
      421 tccgtcgttg actctctcaa tcgatagcaa ggcgaaagcc atgaaagccg aaggcatcga
      481 cgtctgcggc ttcggtgcag gcgaaccgga ttttgataca ccagagcaca taaagagggc
      541 cgcaatcgag gctttggaag ctggttttac gaaatacacg ccaagcgctg gcattccgga
      601 actgcgccag gccatcgcgg acaaactggc agccgacaac ggactgactt accgcgccgg
      661 tcaggtcgtg gtgagtaacg gcgcgaaaca cgcatgctac aatgcgattc tagcgacttg
      721 tcagcccggc gatgaagtca taattcctgc cccatattgg gtcagctacc ccgacatggt
      781 gcggttagtc ggcgctgagc ctgtaatcgt gcccaccagc gagcgcaatg cttggaaaat
      841 gcgcccggaa gatttcgaaa acgcgatgac gccacgcacg aagatgttga tcatgaacag
      901 cccgggcaac ccaacgggat ctgtttatac gcgtgaagaa ttggaggcaa tcgtcagcgt
      961 cgccgcggaa gaagacattt atgtcttgtc cgacgagatt tacgagaagc tcgtttacga
     1021 cgacgtcaaa catgtgagca tcgcctcctt gtcgaaggaa gcgtacgatc tcacaattac
     1081 gatcaacgga tttagcaaat cctacgcgat gacaggctgg cgactcggtt atctcgccgc
     1141 gcccgatgcg gtcgcgagag ccgtcgattc aatccagagc cataccagtt cgaacccgtc
     1201 gtccttttcc caatacggcg cgcttgccgc gcttaaaggc gatcaacaac cgctcgccga
     1261 tatgcgcgag gaattcgata tgcgacgcaa ctacatgttc gaccgcctct cgaagatatc
     1321 caatatcact gcggtcaaac cacagggggc gttttatatc ttggtcaaca tcagccagct
     1381 tggactcaca tcccagaatt tcgcagatcg tttgctgagc aaagcaaacg tcgccgtggt
     1441 gccgggggct gcctttggcg acgatcgcac cattcggttc agttacgcga ccagccttga
     1501 cgtgatcaaa aagggcttgg accgcttcca agacttttgc cggacgctct aggtggaacg
     1561 cgttgtcttc aacgcgttgc caaagtaagt aattgcgcct tcggcgctaa aattgacatc
     1621 gtcttcggag aagccgatcc accttgccct gtcgtttgcc gctcttctag tgttccgcaa
     1681 tgcccggcca tttcgctctt attcttcacg cgcatctccc gttcgttcgt catcctgagc
     1741 acgagcattt catcgaggaa gagtggttgt ttgaggcgat caccgaaacg tacatcccgc
     1801 tgctgcgcat gatgcagcga ctgattgacg attttgtgcc gttcaaactc acgatgtcga
     1861 ttacgccgac gctctgcgca atgcttcagg atcggctgtt atgcgagcgt tatgtccaac
     1921 acctgcatct tttgatcgat cttgctgcgc gcgaacgaaa gcgaaatcgc aaacatccgc
     1981 agctctacga gctggctgaa ttttacattg atctcttttc agaaactcac cgccacttcg
     2041 tggatgaatg gaagtgcgat ctgctctcga tcatccgtga gctgcgacaa acgggcgcgc
     2101 tagaaatcat cgccagcgcg gcaacacatg gcgtgctgcc gatccttcag cagcaatcgc
     2161 ctcgcgcagc gcgtgcgcag gttttgatcg gccgcgacat ttatgtcgaa cttttcgacg
     2221 gggaacccgc cggagtctgg ttacccgaat gcgcttacgc tcccggtttg gaatcgattc
     2281 tacaggaagc gaatctccgc tggttcgttc tcgacgcgca cgggttgctc tttggaacgc
     2341 cgcgcccgtg ccgctccatt tacgctccct gttatacgcc agcggggccg gctgctttcg
     2401 cacgcgatcc ccaggtcagc cgccaagtct ggagtgcgca cgaaggctat cccggcgacc
     2461 ctgcttaccg ggatttttat cgcgacatcg gttttgatct gcccatggaa gatttgggag
     2521 cgatcgcgcg cggaactaga aaattctcca gtgtaaaata ccatcggatc actggacccg
     2581 gcgatgaaaa acagctgtat gaccgaacgg cagccgaaaa tgccgcagca caacacgcaa
     2641 ttcacttttt tgaacaatgc cgtgagcaga ttcgcgaagt cggcgaaccc ggtttcgacc
     2701 cgatcatcgt cgcgcccttc gatgcagaat tgtttgggca ctggtggttc gaaggagcaa
     2761 tgttcctgga acaattcatt cgtcacgcag ctaacgaacg agattttcgg ctcacaacac
     2821 cgagtgaata tttggccacg catccaacgc agcaaattgt tgagcccgct gcctcgacgt
     2881 ggggtgagaa cggccatctc ggcgtctggc tcgatccgag taacgcctgg atttatccgc
     2941 aactcaatgc ggcagctctg cggatgtgcg aagtcgcaga agggtatgaa gaaggcggct
     3001 caaacatgac agacacttgc gaccgcgtac tcaaacaact cgcccgcgag cttttgctgg
     3061 cgcaatcaag tgactgggca ttcctaatga aaaccgggac ggcccgcgaa tacgccactc
     3121 aacgcacgct cgatcacctt gctcgtttca accgtctgca cgatcagttt gtcacaaatg
     3181 atctcgatga agaatttctg cgcgactgcg aatggcggga caacattttt ccgaacgtga
     3241 actggcgcta ctatgcttaa atcaaagatc gcgggtcgcc ctttccagat tgtcactttg
     3301 gtcttttgcg ttgcttttgc ggcaaccgcc gcggcacagg aatcgcccac tccaactcct
     3361 tcgccagcat cgggggaatc tccttctccc tcgatttcgc cggaacaatc tgtgccgccc
     3421 tcgccgaccc cggagcaaac gccttcacct tcgccagcga gaagcgtccg catcagtttc
     3481 attcctccgc caatggacgg cacgatcagc cttgggatct atgatcaagc cggcaaaatc
     3541 gtacgtgtcc tgcatcagaa cgcgcaattg aacgacttca cgattggccc tgattcgctc
     3601 gtgacgcgat gggatggaaa ggatgattgg cagcaggaca tgccccctgg acgatatcac
     3661 gcacgcgggt acttggtcgg tcctctaaaa cgcgaagatc tcggtgaaac ttcgtcacct
     3721 tctcaaatcg aagcgaacgt ggtcaaggtc agactggtcc gcaatccttt gcggaaagac
     3781 aagaggccgg ttatcgacct cggtattgga tttaatagcg agggaagtta cctgaaaacc
     3841 agcgacagtc tgcctctgtt caaagtcagt gagacatcga atgtgacgcg cgcggatatc
     3901 gcagccaaaa gtgagaacgt cgtggatatt tggcaggatg acggcacgag cgtgcatcag
     3961 tttcgcgtct cgaatgttga ccagatgatg gctttcgatt gtggcgaatt tgaattgaaa
     4021 tgaaccgtag ccgcagtctc taaccgccga aataaagaac ggtgcttgac acaagcaccg
     4081 ctacaacgca agcgattgct aatcacaaat gccatctacg cctgaatttc agcagactgt
     4141 tggtaaggtt gccggtttta ccggcactgc gctgcacacc ggtgaaaaag ctacgcttag
     4201 attgcatcca gcgccggtgg atcatggaat taaattcaag cgcaaagact tgcaggatga
     4261 gccaacgatc gacgccaaaa ttgagaacct caagactgtc gagcgctcca cgacgatcgg
     4321 cgaaggctcg gtgcgagttc atacagtcga gcatgtactg gccgcgctcg cggcaatggg
     4381 cgtggacaac gccatcgtgg aaatggacgc aaacgagccg ccaatcggag acggaagcgc
     4441 gcaaccgtat gtcgatctca tcaaaaaggc cggcgtagca gctcaggagg agccgcgcaa
     4501 atttttcgac gtgcgcgaac cgatgcacgt ggaagtgaaa acaggtgcgc tgctcgtttt
     4561 actgccggac gacaaatttc gcatttcgtg cacacaggcc ggaccaaaca atcaattcac
     4621 gcagtttttg tcattggaaa ttacgccgtc gattttcgaa tgcgagatcg ctccggcacg
     4681 cacatttgtt tactacgagg atgttgagcc actcatggat aaaaatctga tcaagggcgg
     4741 cagccttgaa aatgcgattg tcgtgcgcgg cgaggcgatt ttaagcaagg aaccattgcg
     4801 tttctcagac gaattcgtac ggcacaaaat cctcgatatt atcggcgatc tcgcgctagt
     4861 cggtcgccgt atccgcggtc acgtggtggc agtgaagccc ggacattctg cgaatgcgga
     4921 attggctcgc gcgctggctc gcgagcagac gcggagaacc gcgatgagcg catcgcgtgc
     4981 catcccaata ggcgattccg gtctggacac tggcgaagtg atgaaggtcc ttccacaccg
     5041 ctaccctttt ttgatggttg accgggtcat cggtttcgag ggcgaaaata aaattacggc
     5101 cataaaatcc atcacgatta acgagccgtt ttttcagggg catttcccgg gtcatccagt
     5161 catgcccgga gtaatgcaag tagaagcgat ggcgcaagtg gccagtattc ttttgttcaa
     5221 attgacgaag actacgagtc gtgtcggcta tttcatgagc gcggatgagg tgaaatttcg
     5281 caaaccagtt tttccgggcg acacgatttt catccacgcc gagctgacga gagcgcgcgg
     5341 caatcgcatg gcgaaaacga agtgctactg cgtagtcaac gacgcagtcg tctccgaagg
     5401 cgagttgatg ttcacgttct tggataaatg aggtgaatga cgaagcacga atgacaaacg
     5461 acgaaggaat tccgaatggc gaatgacaaa aatttgtcgc cgcacacatt ttgagcttcg
     5521 agtttcgtca ttgattcgtc attcgtcatt ggtcatttgt cattatgtct gacgtgcaga
     5581 ttcacccgac cgcaatcgtt gatcctgccg cggaactagg ggcgggaaca atcgtcgggc
     5641 cgtattgcgt catcgattcc aatgttgtcc tcggtccaga ttgttggctg cagcatcacg
     5701 tcacgctttg cggaccgatg aaggctggcg cgaaaaacaa gttttacgct tactgctcga
     5761 ttggccagca aacacaagat ttaaaatatc gcggcgaacc gacgtatctg gaaatcggcg
     5821 acgagaacac ctttcgcgaa ttcgttaccg tgaatcgcag cacgaccagc gaaggcaaaa
     5881 cacggatcgg caactccggg aattttctcg cttacagtca tatcgggcac gattgcagtg
     5941 tgggcgacca cgtcgttttt tctaataacg gcacattagc gggccacgtt caggtgggaa
     6001 acaacgcggt aatgggcggc ctcactgcag tacatcaatt ttgccgaatc ggacgattcg
     6061 ccatcaccgg cggttgctca aaaattgtcc aggacgttcc accgttcatg atcgcggacg
     6121 gcaacccggc tgagattcgc ggcgttaatc tcattggttt ggaacggaaa aattacccgc
     6181 ctgaaagtgt taagctgatc aaagaagcct ttcgcctgat ttaccgctcc aaatacaacc
     6241 gacgccaggc aatcgaagcg atgcagaaag aactgcccca gacagaagag atcaccgaac
     6301 tcattcaatt tattgaaaaa agcgaacgcg gaatcactcg gtgaagactc aacggcggat
     6361 tatgtcggtg gaatggacat tgtgaggtct caacgtgtcg ctgataaaaa ccataacagc
     6421 gttttggctt agagcagcga caggtgaaac cgctgggggg aaatcaatcg tcatccgtgt
     6481 cacaacaaga agcagacttg ccacaagatt aacttgaagt taaacttcat gctaaatgaa
     6541 aacgattacg atgcttgaat ttcgtcagaa tgcgcaatcc gttctgcgtc gtattgccaa
     6601 aggcgaacgg ttcgtcctct cgcatcgagg caagcgtgcc gcgcgcctcg agccactgac
     6661 cacagcgtcg gataacgttt cgtcaaatga tccgtttctg accatcggtt cccgcgccat
     6721 ggccagtcct aaaggaaaaa cgagacacac cgatatcgat cgcatcgtct atggcggcag
     6781 ttgaggtttt tgtcgatacc gccggcttcc tcgccttgtg ggacgcgggc gatgcacacc
     6841 atagacccgc actgcggctt cagcaggagt tagcacgaaa acgccgccat ttcctcacca
     6901 ccgaatatgt ggccgacgaa accattactc tgttgcttgc gcgccacagt tatcgcgtcg
     6961 ccacagactt tcttgatacg atcgaacgca gcgaagcgct ccggctggaa tggattgatc
     7021 ccgcgcgttt tcacgccgcc gctaactggt ttcgcaaaca taacgacaaa gaatggtctt
     7081 tcaccgattg cgtcagtttc gctgtcatgc gcgagctccg cattcgcgat gctttcacga
     7141 cggatcatca ttttcagcag gccggtttca atcctcttct caaggcttag ggacaaggcg
     7201 agaccgctcg gaaattccag cagatttatc actcggagtc tctcgcgcac gcgatgggga
     7261 aagctttcaa gttgaaagta aatcgctgaa gatttgaaat ctgcggaagc tgatctctga
     7321 actctcaacc aacaagtctc aacctctccg atgtctgccg ttctcacact attgcgaatt
     7381 agaaatcttg cgctcgtgga agaactcgaa tggcagttgg gggcggggtt tgtcgcggtc
     7441 acgggcgaaa ccggcgcggg gaaatccatc atcataggtg cgctgcaact tttgctgggt
     7501 gagcgcgcgg acaaatcgct gattcgcacc ggtgctgatc tttgtaccgt cgaagccatc
     7561 tttagtggcg cggaattgca aaagctcaat ccgacgctga ccgaagcggg cgtagagcca
     7621 tgcgaagacg atttgatcct gaagcggaca ctctcctcga ccgggactaa tcggcagttc
     7681 atcaacgggt cgccaacgac actgtcagta ttgaaaaatt taggagacga acttgtcgat
     7741 ctccatggcc cgcacgatca ccagtcgtta ctatcgcctg acaggcaatt gagcttgctc
     7801 gactcgttcg cgcgcgccga accacagctc gaggaatatc aagcacttta tcggcaatta
     7861 cagacattgc tcgccgaaca tgccgcgctc aacacggcgg aaacagcgcg cgaacaggaa
     7921 ctggatttgc ttcggcacca aatcaccgag atcaaatctg cgaaactcgt cgggagcgaa
     7981 gaagaagaga tcgataagcg ctacaaactc gccagcaaca gcaaacggct gattgagctc
     8041 gccagcgcga tcgcgaacaa actttccgaa gcagacgatt ccgttctctt acagctcgcg
     8101 gaaacgcaac ggctgcttcg agaattggaa aagatcgaca gctcagtcgc acaattctcg
     8161 acggcgcacg ccgccgctgt ggtcgagctt tccgaaatcg cgcgcactct ctcgacttat
     8221 gtcgagaaat tcgatctcga tccggaacaa ctcgtcgcac ttgaacaacg cgtttcgctg
     8281 tttgaaacgc tgaagcgcaa atacggcggt tcaattgccg acgtgatcgc gttcggtgac
     8341 cgcgcggctg agcggatgcg caaaattgaa gggcgggacg cagagttgga gcgacttacg
     8401 aaagacatcg aaaatgttcg ctcgcaaatg aaccgcaccg gcgaagcgct gcgcaaatcc
     8461 cgcctaaagt ttgcgccaaa actttcggag aatattcggc gaaatttgcg cgaccttggg
     8521 tttcgtcagt cagaattcga agcaaagctt agcgcgctcg acgatccgcg cccgaatgga
     8581 tttgattcgg tagaattatt gttctcgcca aatccgggcg aacccctcaa accgcttcgc
     8641 gcgatcgcat cgagcggcga aatttcacga ctgatgctgg cgatcaaatc cgcgctggcc
     8701 gtgcatgacg caattccatt gcttgtgttc gacgagatcg acac
//
LOCUS       DATDAJ010000360         2922 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2015276, whole genome shotgun sequence.
ACCESSION   DATDAJ010000360 DATDAJ010000000
VERSION     DATDAJ010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2015276"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(241..1383)
                     /locus_tag="VIS53_09005"
     CDS             complement(241..1383)
                     /locus_tag="VIS53_09005"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY5767959.1"
                     /translation="MEPSTISGTNLRTAFVLLLVVAVTALFLAVTWPFLKPLLLGALL
                     AGLFHPLYRWITRLLGGRRSLGAAVTLLVMLVLGLGPVSAFLGIVLQQALTMSDQALP
                     WLNQHLGAATAFNVQEWVVQKFPALAKYMPSQEQLLEQVGTAAKTAGTFLVGFASRMT
                     ATTAAFLLNLFVMLYAMFFFFRDGDKILERIFYYTPLSDEDETRMLTQFASITRATVK
                     GTLVIGIIQGALAGIAFWVAGIEGAALWGTIMTILSIIPGIGAALVWVPAVIILFVTG
                     HYLTATLLAAWCAAVVGTVDNFLRPMLVGRDAKMPDLLILIGTLGGLFLFGPMGFIVG
                     PIVCGLFLTVWDIYGATFREILPPVTSFRRSNQDASAIAPQESSDQ"
     gene            complement(1564..1974)
                     /locus_tag="VIS53_09010"
     CDS             complement(1564..1974)
                     /locus_tag="VIS53_09010"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY5767960.1"
                     /translation="MKTITGGCACGAIRYEVTAEPIVTFNCHCRDCQKTTGGAYTPVF
                     YVPANGFKITKGTPKYYGTTSEMMGDNVRGFCPECGSRLFGGKTDFGQGIAAGTLDDP
                     SLYKPQHEIWTSDAQPWDAMDPKLPKFERYAPRE"
     gene            complement(2031..2318)
                     /locus_tag="VIS53_09015"
     CDS             complement(2031..2318)
                     /locus_tag="VIS53_09015"
                     /inference="COORDINATES: protein motif:HMM:NF021552.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEY5767961.1"
                     /translation="MCRAIKTLHNFSPPATNDEIRASSLQFVRKLSGFTKPSRANEEA
                     FNRAVDDVAHAAHHLLESLVTNAPPRDRETETLKAKTRSVKRYGTAKTVAA"
     gene            complement(2368..2775)
                     /locus_tag="VIS53_09020"
     CDS             complement(2368..2775)
                     /locus_tag="VIS53_09020"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY5767962.1"
                     /translation="MSKSIRGSCLCGGVRFEVDPPFIQASHCHCERCRKHSGTAVCTQ
                     ARVLREQFRLLQGKELIKVYGKGEGAIKAFCSNCGSSLFGGDWPDGPQVSIRMGAFDD
                     DPGIRPQFHTFVADRAPWDTITDDLPQYPERRT"
BASE COUNT          691 a          833 c          744 g          654 t
ORIGIN      
        1 aatttagttt tactttgccg gataaaccag ccgaagacag ctttccgagg agcagctaag
       61 gaaaaaaagc cgtcgcgcca cgcgaattgc acggacagtt cgcccacccg cttggcgtgc
      121 ggaaatgcgc ccaccggttc gggtgctcgt tcgcttttga aggtttcgtt tattgcgtat
      181 ttactgcccg actagacgga ttaaggcaac gcatattttc cagttagcac aaagcggaat
      241 ttattgatcc gacgattctt gcggggcgat tgccgatgca tcctggttcg atcgacggaa
      301 gcttgttacc ggcggcagga tttccctgaa agtagcgccg taaatgtccc aaacagtaag
      361 aaagagtccg cagacaatcg gtccgacgat gaatcccatc ggaccaaaga ggaacagtcc
      421 gcccagagtg ccaatcaaaa tgagaaggtc cggcattttc gcgtctctcc ctacaagcat
      481 tggtcgtagg aaattatcga cagtgccgac cacagcagcg caccacgccg ccagcaaggt
      541 tgccgttaga tagtgcccgg tgacaaacag aatgataaca gccggcaccc acaccagggc
      601 ggcaccgatc ccggggatta tcgaaagaat cgtcatgatc gttccccaca gagccgctcc
      661 ctcgattccc gctacccaaa aagcgatgcc ggccaacgcg ccttgaatga tgccgattac
      721 cagcgtccct ttgacggttg cccgcgtgat cgaagcgaac tgggtgagca ttcgcgtctc
      781 atcctcatcg cttaacggag tgtaataaaa aatgcgttcc agaattttgt cgccgtctct
      841 gaaaaagaaa aacatggcgt aaagcatcac aaacaagttg aggaggaacg cagctgtggt
      901 ggcagtcatg cgcgaggcga aaccgacaag aaatgtaccg gcggttttgg cggcggtgcc
      961 gacttgttcc agcagttgct cctggctggg catgtattta gccagtgccg gaaatttttg
     1021 caccacccac tcctgcacat tgaaggcggt agcggcacca aggtgttgat tcagccacgg
     1081 tagggcctgg tcactcatgg tcagcgcctg ttgcagaacg atccctaaaa atgcgctgac
     1141 tgggccaaga ccaagaacga gcattaccaa caaggtgact gctgcaccca gtgatcggcg
     1201 gccgcccagc agccgggtaa tccagcggta gagcggatga aacaacccag cgagtaacgc
     1261 gccgagaaga agcggtttca aaaacggcca cgtgacggcc aaaaacaacg ctgtaaccgc
     1321 caccacgagc aacaagacga acgccgtgcg caaattcgtg ccgcttatgg ttgatggttc
     1381 catgggtcgg ctccgatacc tctaatgagg ctaatcgcag attcgcctga ttacagcgtt
     1441 tccttcaacc cttggtcaag ctggttgcag caacggcccg agaaaactaa taactcgtta
     1501 tgcgctttgc gtgcggagac gctccaatcg gttcaagctc ccgtttgctt tcgcatgtgc
     1561 cgctcattcc cgcggcgcgt atctctcgaa cttcggcagc ttaggatcca tcgcgtccca
     1621 tggttgcgcg tcggacgtcc aaatttcgtg ctgcggtttg tacaagctcg gatcgtccaa
     1681 agtcccagcc gcgatgcctt gtccgaaatc tgtcttgccc ccaaacaatc gcgaaccgca
     1741 ttccggacaa aaaccgcgca cattgtcgcc catcatttcg ctggttgtgc cgtaatattt
     1801 cggggtgcct ttggtaatct tgaacccgtt cgccgggacg taaaaaacag gagtgtacgc
     1861 tccgccggtt gttttctggc agtcgcgaca gtgacaattg aatgtcacaa ttggttccgc
     1921 tgtaacttca taacgaatcg cgccgcaggc gcagccaccg gtaatcgttt tcattttgta
     1981 actctcaagc taatgaaaat gtttcctgag caacgacgtt gaataattcg ttaggccgcg
     2041 acggtctttg ctgtcccata tcgcttcact gatcgcgttt tcgccttcaa cgtttccgtt
     2101 tcgcgatccc gcggcggcgc attggtgacc agcgattcaa gaagatggtg cgcggcatgg
     2161 gccacgtcat ccaccgcgcg attgaatgct tcttcgtttg cgcgcgatgg ctttgtaaat
     2221 ccggaaagct tccgaacaaa ttggagcgat gaagcgcgaa tctcgtcatt cgtcgctggt
     2281 ggtgaaaaat tatgcagggt cttgatggct cgacacatgt ctgacactca accctcagct
     2341 ctcaaccctc aactgctttg actttgttca tgtccgtcgt tccggatact gtggaagatc
     2401 atcggtgatc gtgtcccacg gcgcgcgatc ggcgacgaac gtatgaaatt gcggtcgaat
     2461 tccgggatca tcgtcgaacg cacccattcg aatcgatacc tgcgggccgt ccggccaatc
     2521 gccgccgaat aaactcgaac cgcaatttga acagaacgct ttaatcgcgc cttcgccttt
     2581 tccatagacc ttaatcaatt ccttgccttg aagcagacgg aactgctcgc gcaacacacg
     2641 tgcctgagtg caaacggccg ttccggaatg cttgcggcaa cgttcgcaat gacagtggct
     2701 cgcttgaatg aatggcggat caacttcaaa ccgcacgccg ccacacagac aactcccgcg
     2761 aatgctcttg ctcattcgcg actctcatca agcaactatc aactctcaac ttcagccgac
     2821 tcaaaagatt cacttcgcga tgcaaacgtt cttgggctcg gtgaaaaacc tcagcgcttc
     2881 ttcgccgcct tcgcggccaa cgccgctttg tttcatgccg cc
//
LOCUS       DATDAJ010000361         5131 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2021729, whole genome shotgun sequence.
ACCESSION   DATDAJ010000361 DATDAJ010000000
VERSION     DATDAJ010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5131
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2021729"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /gene="glgX"
                     /locus_tag="VIS53_09025"
     CDS             complement(<1..1300)
                     /gene="glgX"
                     /locus_tag="VIS53_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HEY5767963.1"
                     /translation="MTQVRTFLGQPYPLGATWMGNGVNFAIFSEHASRVELCLFDRME
                     DAKEYLRIPIKECTEQVWHVFLPDARPGQLYGFRVSGPYEPERGMRFNSSKLLLDPYA
                     KAIVAAVSWTDEMFGYVIGGEKEDLTQDFRDDAWGVPKSLVIDSGFDWQNDKRPAIPL
                     HESVIYEVHVKGFSKLWRELPEQLRGTYAGLGSPPAIDYFKKLGVTAVELLPVHAHIN
                     EKLLLENGLTNYWGYNTIGFFAPHAEYSSSGQIGQQVAEFKAMVRSLHGAGIEVILDV
                     AYNHTAEGNQLGPTLCFRGIDNLSYYWLHPENLRFYLDFSGTGNSLNLVHPRTLQLVT
                     DSLRYWVEEMHVDGFRFDLATELARNHSGFNTLHPFFQLIQQDPVLSQVKLIAEPWDV
                     GEGGYQVGNFPPPWSEWNGKFRDSVRGVWKGDEGHIGEMAN"
     gene            1414..1935
                     /locus_tag="VIS53_09030"
     CDS             1414..1935
                     /locus_tag="VIS53_09030"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY5767964.1"
                     /translation="MKLTIIFAALILTCTFAVYLYSHHNWNSLPAGTTIDRIVVEKSG
                     RRLSVFRNSNQLKTYRIALGRNPLGAKQEEGDMKTPEGIYKIDGRNPQSSFHLALHVS
                     YPSDEDDKRAAALGVSAGFDIMIHGIQNGRGWIGAFHRWNDWTAGCIAVTDEEIEELW
                     RVTPDGTTIEIRP"
     gene            complement(2065..2376)
                     /locus_tag="VIS53_09035"
     CDS             complement(2065..2376)
                     /locus_tag="VIS53_09035"
                     /inference="COORDINATES: protein motif:HMM:NF040320.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY5767965.1"
                     /translation="MNAHPKLSVETAIQLAVFLANRPGALARVCEALAYAGINIYALA
                     TSDTVDHTVLRMVVSDPTKALMLLGEAGVLALETDVLSIETASEPGVMGKIAERLAEA
                     K"
     gene            2553..3893
                     /locus_tag="VIS53_09040"
     CDS             2553..3893
                     /locus_tag="VIS53_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5767966.1"
                     /translation="MTTLTQRAAVKSAPPKRTIGFVTACSIVISNIIGTGIFTSLGFQ
                     LNDIQSGFALLMLWVIGGIAALCGALCYGELAAAMPRSGGEYHFLSKIYHPALGFMAG
                     FVSATVGFAAPVALAAMAFGQYFNGVFGVGSPVVLSFVVVWIVTVFHVGNLRVGSAFQ
                     NVSTLVKLLLIGALIGAGFFVPIKQPISFLPAAGDKAAILSGAFAVALVYVMYSYSGW
                     NASAYISSEIKRPEKNVPRSLLAGTGLVIVIYVLLNAIFLATTPAEELKGQLEIALIA
                     GKHIFGENGGRFAGAIICLGLVAAISSMTWIGPRVTMSMGEDHWLLRWLGGKNKNGIP
                     TNAIFLQLLFVNLLLLTQSFQNVVRYTQFSLLLCSLLAVLGVIVLRFRRPEITRPYRV
                     WLYPIPPVIFSIITIWMMFYLLRSHAAESLAGLATALSGLVLYFCAQKRRDRSP"
     gene            3890..5017
                     /locus_tag="VIS53_09045"
     CDS             3890..5017
                     /locus_tag="VIS53_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767967.1"
                     /translation="MKTNCTALSIALGLVSALTVCAQENPEVAPRAIPVNSGPNDVAR
                     FLAGMPVSENSPLAPLTRDPKWQAHAAFFEEQFSKVNLRQLQKLQGWQATYLPESAQP
                     KPVVFYMFSGPDFLYVDQFFPRAAVYVLCGKEALGPPPDPLRIANLSGALGNLENAMK
                     SSLNTTYFITKDMKVDLHEQNLNGVLPILYTCIARADKSITSVSVGSLNSGGVFEEAA
                     PGRKGGSTPGVRIRYTDNQSGTAQTLYYFTTDISDGGIKASPGFLKFCQRLGTGASFL
                     KSPSYLLFESGFATIRNFVLDHSNMIVQDDSGIPLAYFDPNKWNLHFFGVYLGPIEMF
                     KQHYQPRLHELYQQSNPPPLDFGFGYRWNYKEANLIVATRK"
BASE COUNT         1134 a         1418 c         1343 g         1236 t
ORIGIN      
        1 gattcgccat ttcgccaatg tgcccttcat cgcccttcca aacaccgcgg accgagtcgc
       61 gaaattttcc gttccattcc gaccagggcg ggggaaagtt gcccacctga tagccgcctt
      121 ccccgacgtc ccacggttct gcgatcagct tcacctgcga gagcaccggg tcctgctgaa
      181 ttagttggaa aaatggatgc agcgtattga atcccgaatg attgcgcgct agttcggttg
      241 cgagatcgaa tcgaaatccg tccacgtgca tctcctccac ccagtaccgc aagctgtcgg
      301 tcaccaattg tagcgtccgt gggtgaacca gattcaagct gttacctgta ccgctaaaat
      361 cgagatagaa ccgcagattc tcagggtgca gccagtagta ggagagatta tcgatccccc
      421 ggaaacaaag cgttgggcca agttgatttc cttccgcggt atgattgtaa gccacgtcga
      481 gaatcacttc gatgccagcg ccgtgcaggc tgcgcaccat cgctttgaac tcggcgacct
      541 gttggccgat ttgtccactg ctggaatatt ccgcatgcgg agcgaaaaag ccgatcgtgt
      601 tgtagcccca gtagttcgtt aggccgtttt cgagcaaaag tttttcattg atgtgcgcgt
      661 gcacggggag tagttcgacc gcagtcacac caagcttttt gaaatagtcg atcgcaggcg
      721 gactaccgag gcccgcatag gtgccgcgca attgctcagg caattcccgc caaagtttgc
      781 tgaaaccttt cacgtgcact tcatagatca cggattcgtg cagtggaatc gcgggcctct
      841 tgtcattctg ccagtcaaat ccggaatcga tcacgagtga tttcgggacg ccccacgcat
      901 cgtctcgaaa atcctgagtc aaatcctctt tctcaccgcc gatgacgtaa ccgaacattt
      961 catccgtcca gctcaccgcc gcgacgatcg ctttcgcgta cggatcaagg aggagctttg
     1021 agctgttgaa acgcatgccc ctctctggtt cgtaagggcc ggatacccga aaaccgtaca
     1081 actgtcccgg tcgcgcatcg ggcaaaaaga catgccacac ctgctcagta cactccttga
     1141 tcgggattcg aaggtattct ttcgcgtctt ccattctgtc gaacaggcag agctcaactc
     1201 tgctggcgtg ctcggaaaag atcgcgaagt tcacgccgtt acccatccag gttgcgccca
     1261 gcggatacgg ctgaccgaga aacgttcgta cttgggtcat aaacgcgccg cgcatttatc
     1321 cggcattggc ccgatgttag caatgacaat ggcgcgcggg ataaattctg acgtagttgt
     1381 gtttcctcga aacgcgaatc ggaacctcac aacgtgaaac tcacgataat attcgctgcg
     1441 ctaattctga cttgtacttt cgcggtttac ctctattcgc atcacaattg gaattccttg
     1501 ccagccggaa ccacgatcga tcgcatcgtt gtagaaaaat cagggaggcg actatcggtg
     1561 tttcggaata gtaatcagct gaagacctac cgaatcgctt tgggtcggaa tccgctaggc
     1621 gcgaagcagg aagaaggcga catgaaaacg ccggaaggca tatacaagat cgatggccga
     1681 aatccgcaaa gcagtttcca tctcgcgctg cacgtttctt atccatcgga tgaagacgat
     1741 aagcgtgcag ctgcactcgg agtttcggcg ggttttgaca tcatgattca cggaattcaa
     1801 aacggacgcg gctggattgg cgcgtttcat cgctggaacg attggaccgc cggttgcatc
     1861 gcagttaccg acgaggagat cgaggaactt tggcgggtta cgccggacgg gacgacaatc
     1921 gagattcgtc catgagcaac tggcggccca acgattttcc taaagctcct cgagcacacg
     1981 tcgcgctttc gacatccgat ggccgcagga tgatcagacc tttttctgct tcgcgaccgc
     2041 cagcgagata agtgtattca atgttcactt cgcctcggcg aggcgctccg cgatcttacc
     2101 cataacaccg ggctcgctag cagtctcgat agagagcacg tcggtctcaa gcgcgagtac
     2161 tccggcttcg cctaagagca taagcgcctt cgtgggatcg ctcaccacca ttcgcagaac
     2221 agtgtgatcg acagtatcgg atgtagccaa cgcgtaaatg ttgatcccgg cataggccag
     2281 cgcctcacac acgcgcgcga gtgcgccggg acgattagca aggaaaactg cgagttggat
     2341 agccgtttct acggagagct tgggatgtgc gttcatgctg ctgcagactg acgcccggaa
     2401 gctcttctga caactaacca aagtggtcta gcacagcata caacaatgga acaccgactg
     2461 gaatggaccc gccgcctttc gttcgatcct gggcgttgaa tcttggatgt tcggcgttct
     2521 ggagtaagaa agtttgaatc gaattccgac cgatgaccac acttacccag cgtgctgctg
     2581 ttaagtctgc accaccgaag cgcaccattg gcttcgtaac cgcgtgctcg atcgtgattt
     2641 ccaacatcat cggcaccggc atcttcacga gccttggttt tcaattaaat gatattcagt
     2701 ctggattcgc gctgctgatg ctttgggtca tcggtggaat tgccgcgctc tgcggcgcac
     2761 tctgttacgg tgaactcgcc gcagcaatgc cgcgttccgg gggcgaatac cattttctct
     2821 cgaaaattta tcatccagcg cttgggttca tggcgggatt cgtgtcggct acggttggat
     2881 ttgccgcgcc cgttgcacta gcagcgatgg cgtttgggca atatttcaac ggagttttcg
     2941 gcgtgggctc gccggttgtt ctgtcattcg tggttgtttg gatagtcacc gtttttcatg
     3001 ttgggaatct gcgagtcggg agcgcattcc agaatgtttc gacactcgtg aaattgcttc
     3061 ttatcggcgc gctgatcggg gcaggcttct ttgttccaat aaaacagccg atcagtttct
     3121 tgcctgccgc cggcgacaaa gccgcgatcc tcagcggagc attcgcggtc gcgctggttt
     3181 acgtcatgta ttcgtactcc ggctggaacg cgtcagcgta tatcagcagc gagatcaagc
     3241 gacctgagaa aaacgtgccg cgctcactgc ttgccggcac cggcttggtg atcgtgattt
     3301 atgtgctgct caacgccatc tttctcgcga ccacgcctgc tgaggaattg aaaggccagc
     3361 tcgaaatcgc gttgatcgca ggtaaacaca tttttggcga aaacggcggg cgatttgccg
     3421 gtgctatcat ttgtctgggt ctggttgccg ccatcagttc gatgacgtgg attgggccac
     3481 gcgtgaccat gtccatgggc gaagatcatt ggttgctgcg atggctcggc ggcaaaaata
     3541 aaaacggtat ccccacaaat gcgattttcc tgcaattgct cttcgtgaat ctacttctac
     3601 tgactcaaag cttccagaac gtcgtccgct acacgcaatt cagtttgctg ctttgctcgt
     3661 tgcttgctgt gttgggcgtg atcgtgcttc gtttcaggcg ccccgaaatt acgcgaccat
     3721 accgggtttg gctttacccg attcctcctg ttattttttc gataatcacg atttggatga
     3781 tgttttatct attgcgctcg cacgctgcgg aatcactggc cggtttggca acagcgctgt
     3841 cgggtctggt gctctatttc tgcgcgcaaa aacgccgtga tcgctcgcca tgaaaacaaa
     3901 ttgcaccgct ctatcgatag ctctcggcct tgtgagtgcg ctgaccgttt gcgcacagga
     3961 aaatccggaa gttgcgccac gcgcaattcc ggtgaactcc ggtccaaatg acgttgcgcg
     4021 ctttctcgcc ggaatgccgg tgtcggagaa ttcaccgctc gctccgctga cgcgcgatcc
     4081 aaagtggcag gcgcatgccg cattctttga agagcaattt tcaaaagtta acctcaggca
     4141 gctccagaaa ttgcagggat ggcaggcgac atatctcccc gaatcagctc agccaaaacc
     4201 cgtcgtgttt tacatgttca gcgggcccga ttttttatat gtggatcaat tctttccaag
     4261 agcggcggtg tacgtgctct gtggaaaaga agctctcggc ccgccgccgg acccgttgcg
     4321 catcgcgaac ttgtccggtg cgctgggaaa tctggaaaac gcgatgaagt cctcactcaa
     4381 cacgacgtac ttcatcacaa aagatatgaa ggtcgatttg cacgagcaga acctgaacgg
     4441 cgtgctgccg attctttata cttgcatcgc gcgcgcggac aaatcgatca ccagcgtctc
     4501 agtcggatcg ctcaacagcg ggggcgtatt tgaagaagcc gcgcccggca gaaaaggcgg
     4561 tagtactccc ggagtgcgta ttcgttacac cgacaaccaa tccggcactg cacagacgct
     4621 gtattatttc accaccgata tttctgacgg cggcatcaaa gcgagtcccg gtttcctgaa
     4681 attttgccaa cgcctcggta ccggcgcgag ctttctaaaa tcgccatcgt atctgttgtt
     4741 cgaaagcggt tttgccacca ttcgcaattt cgtcctcgat catagcaaca tgatcgtgca
     4801 ggacgattca ggtatcccgc tagcttactt cgatcctaac aagtggaatc tgcatttctt
     4861 tggcgtgtat ctcggcccca tcgagatgtt caaacaacat tatcagcccc gactgcatga
     4921 actctaccaa caatccaatc cgccgccact cgacttcgga ttcggttacc gatggaatta
     4981 caaggaagcg aatctgatcg tcgccacgcg caagtaatct tgtcatctcg agcgcagtcg
     5041 agagatcccg ttgcaaagcc catcggtaac ttcgcgggat cgtcgattcc gctgcgctcc
     5101 gctcatgacg ttagccctta aaatctgcgg a
//
LOCUS       DATDAJ010000362         4445 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2024037, whole genome shotgun sequence.
ACCESSION   DATDAJ010000362 DATDAJ010000000
VERSION     DATDAJ010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2024037"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VIS53_09050"
     CDS             <1..275
                     /locus_tag="VIS53_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767968.1"
                     /translation="MPWILRFAIGSLFIFVIGAVMIAWACMSTGWETLSRFAWGCVTA
                     GAGLIGTALLSMLSAVIHKGWRRFSLALMSVSVLLFLALLIFAKFA"
     gene            313..780
                     /locus_tag="VIS53_09055"
     CDS             313..780
                     /locus_tag="VIS53_09055"
                     /inference="COORDINATES: protein motif:HMM:NF039957.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6010 family protein"
                     /protein_id="HEY5767969.1"
                     /translation="MALSVIIVLYVCVGILAAAGSIFISQKLFSAKAEQIFFALFLVA
                     IAAFYLAFTAYFRDQGAWRLETGAVIVFALFGIFGLRLPVVLIIGYCLHGIWDVVHEV
                     HAYCGVSSFGTHELTELPLAYGAFCAAYDWCVAGYFYTRRREWNAAWKVGAGS"
     gene            807..1604
                     /locus_tag="VIS53_09060"
     CDS             807..1604
                     /locus_tag="VIS53_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767970.1"
                     /translation="MTRLAVILLLTLLLPQLASAKRIEPEKVDPVIYEGIRYVAPNDD
                     GRRGYIEAWNVGTNEKLWELTIFTNGIDPNLEKDVQWVFIKALNIQDGRLMVTSESGR
                     TYQVDVSTKAITQTDSPSSPLPGAIHEVSDAVKKTLTNGSLGKQFDLSFRMNPSYLGD
                     FNGDGKMDVAVLVKERSTGKLGIAIVHGTTGKVTILGAGIGIGNGGDDFEWMDSWQVY
                     SKTHAAHAAGESVPRLRGDALLVEKSEAASALIYWNGKRYVWSQKGD"
     gene            complement(1634..3184)
                     /locus_tag="VIS53_09065"
     CDS             complement(1634..3184)
                     /locus_tag="VIS53_09065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5767971.1"
                     /translation="MTLFEDRRTLWIVAALIVLLFAVSNLPWQLDDYDQAKQAFTSFE
                     MVKEGHWLYQHTPHERVATKPPLVGWISAALFAVTRSWEIAWRLPSLVAALALAVVLF
                     RAAKDAYGKVAAGIAIGAFGLNLLSPRLATLVRTDMPLALVVFLIGLLIWQKIRGGDE
                     WKLRDQVYVFVLLTAAMLIKGPIVYAFLLPGIAVNVVAVAMWATRSPRTGRRLQSAWP
                     GWWPWLASLAIFLVWVAGGIRFQPGFYEEVVMREFVGRFGETIHRPQPLLFYLPHLLH
                     KFAPWSVLIVAIAIFDLRSRNWRLRPVFREMSPETFWLLCWSIGGLIVMSLIPSKRVD
                     RIFPVIPPLCLLLAAQIGGRRSSSRSDGFPAVNLEIDGCPSRRSLNAQAATLRPYVAI
                     TLIFAILFTGGYTCWKVITAYRDDRDALAVFGKSIRHEAHAHHWRYEIVSAKDEGLLL
                     YLRKTHFVKPADAITEWNTGNLDALVASKEKAAVLMPNLKGAALSQLQSNKRELHHQA
                     RRYVLITR"
     gene            complement(3287..3934)
                     /locus_tag="VIS53_09070"
     CDS             complement(3287..3934)
                     /locus_tag="VIS53_09070"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY5767972.1"
                     /translation="MKIWDISRTLSNDFAEWPGDEPFRYRVTNEIAKGASVNVGAITM
                     SVHNGTHADARFHFEMNGAPIEKASLEIYLGRATVVDLSETFSQSTEKHLITREDLRP
                     HAEEIAATSRLLVKTGRWSDSTVFPNRIPVIAADVPAWLQKNGVKLLGVDLPSMDELD
                     SKSLQNHHALASAGIAIIESLDLSDVAPGIYNFAALPLKIAGADGAPVRAVLWRD"
     gene            complement(3931..>4445)
                     /locus_tag="VIS53_09075"
     CDS             complement(3931..>4445)
                     /locus_tag="VIS53_09075"
                     /inference="COORDINATES: protein motif:HMM:NF014714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEY5767973.1"
                     /translation="LLQLSPTLRFQVAAASIELAREMSEQLAGRETIEISVGQTATIM
                     QRAFVGIVASGSATLEAAYFGMPFVLIYKVAWPTYVAARLVVNVDFLGMPNLLAGKEV
                     VPEFIQHEAKPDAIVNAVRLLMEDSPARDRMISDFDATTSQLGGTGASDRAARAILEE
                     LQTGAPSTTR"
BASE COUNT         1005 a         1177 c         1254 g         1009 t
ORIGIN      
        1 ctatgccttg gattcttagg tttgcgatcg gctcgctttt catatttgtc atcggcgcgg
       61 tgatgatcgc gtgggcatgc atgtccacag gctgggaaac gctcagccgg ttcgcgtggg
      121 gttgcgtcac ggccggggcc ggtctgatag ggaccgctct cttgtctatg ctgagcgcgg
      181 tgattcacaa agggtggcgc aggttttctc tcgcgctcat gagtgtgtcg gttttgctgt
      241 ttctagcact cctgattttt gccaagttcg cgtgatgaaa cgctcaaccc ttcagttcct
      301 cagctcttct aaatggcgct gtcagtaatc atcgttctgt atgtgtgcgt cggaattttg
      361 gcagcagcgg gatccatctt catttcgcag aaattattct cggcaaaagc agaacagatc
      421 tttttcgctc tattcctagt tgctattgcg gcattttacc tggcgttcac cgcctatttc
      481 cgagatcaag gagcgtggcg ccttgaaacc ggagcggtca ttgtgttcgc tctgttcggt
      541 attttcggtc tcaggttgcc ggttgtactc atcattggct actgcctgca cggcatttgg
      601 gacgtcgttc atgaggttca tgcttattgc ggagtcagtt cattcggcac tcacgaactg
      661 actgagctcc cgttggcgta cggcgctttt tgcgcagctt acgactggtg tgtggccggt
      721 tacttttaca ctcggcggcg cgagtggaat gctgcttgga aggtgggtgc cggctcataa
      781 tgaccgatgt taggcgctgt agagttatga ctcgattggc ggtcatactt ttgttgacgc
      841 tgctcctgcc ccaattggct tctgccaagc gtatcgaacc cgagaaggtg gaccctgtaa
      901 tttacgaagg tatccgctat gtcgcgccga atgatgatgg ccgccgcggt tatatcgagg
      961 cgtggaatgt cgggaccaac gagaagctgt gggaattgac aatctttact aatggtatcg
     1021 atccaaacct cgagaaagac gttcagtggg tattcatcaa ggcattaaac atccaggatg
     1081 gcaggcttat ggtcacatcc gaaagtggaa ggacgtatca ggtcgatgtg agcacgaaag
     1141 cgataacgca aactgattca ccatcgtcgc cattgccagg agcgattcac gaggtgtccg
     1201 acgcagtcaa aaaaacccta acgaatggat cgctcggaaa acagtttgac ctctcctttc
     1261 gcatgaaccc gtcctatctg ggagatttta atggcgatgg caagatggac gtagcagttt
     1321 tggtcaaaga acgctcgacc ggaaagcttg ggatcgcgat cgttcatggc acgactggaa
     1381 aggtgacaat tctcggagct ggcattggca tcggcaacgg tggcgacgat ttcgaatgga
     1441 tggattcctg gcaggtttac tctaagacgc atgccgccca cgccgcgggt gaaagcgtcc
     1501 cacgtctccg cggcgacgcg cttctggttg agaagagcga agccgccagc gcgttgattt
     1561 actggaatgg caaacggtat gtctggtccc agaaaggtga ctagcagcca gctgtgtgcg
     1621 aacccgcaag aggttaacgg gtaatcaaaa cgtatctcct ggcctgatgg tgtagttctc
     1681 gcttatttga ttgcaattga gaaagagcag cacctttaag gttgggcatt agaaccgccg
     1741 ctttttcttt tgaagcaacg agcgcgtcca gatttccggt attccattct gtgatggcat
     1801 cagccggctt aacgaaatgc gtctttcgaa gatagagaag cagcccttca tctttggcag
     1861 atacgatctc gtaacgccag tgatgcgcgt gtgcttcatg ccgaatactt ttgccaaaaa
     1921 cggcgagcgc gtcgcgatca tcgcgatagg cggtgatcac cttccaacat gtgtagccac
     1981 ccgtgaaaag aattgcgaag atgagcgtga tggcgacgta gggacgcagc gtcgcggctt
     2041 gtgcgttcaa ggaacggcgg cttgggcagc catcgatttc caagttgacg gctgggaagc
     2101 cgtcactcct tgaggaagat cggcggccgc caatctgcgc cgcgagaagc aaacagagcg
     2161 gtggaatcac aggaaaaatt ctatcaacgc gctttgatgg gatgagcgac atcacaatca
     2221 atccaccaat gctccagcaa agcagccaga aagtttccgg agacatttcg cgaaacacgg
     2281 ggcgcaagcg ccagtttcgc gatcggaggt cgaagatcgc gatcgcgacg atcagcacgc
     2341 tccacggcgc gaatttgtgc aatagatgcg gcaaataaaa gaggagcggc tgcgggcgat
     2401 gaattgtttc accaaagcgg ccgacgaatt cgcgcatcac aacttcctcg taaaatcctg
     2461 gctgaaaccg aatgccaccg gctacccaaa ctagaaaaat cgcgagtgag gccagccacg
     2521 gccaccagcc gggccaggcg ctctgtagcc gcctccctgt gcgaggcgag cgcgtcgccc
     2581 acatggcgac ggctacaaca ttcaccgcaa tgcctggcag cagaaaagca taaacgatcg
     2641 gacctttgat caacatcgcc gcggtgagca gaacaaagac gtaaacttga tcgcgcagtt
     2701 tccattcgtc tccgccgcgg attttctgcc agatcagcag gccgattaaa aaaaccacaa
     2761 gtgccagcgg catgtcggtg cgcacgagcg tggccagccg cgggctcagc agattcaggc
     2821 caaatgcgcc gattgcgatt cccgcggcga cttttccata cgcgtcctta gcagcgcgaa
     2881 ataacacgac cgcgagcgct agtgcggcga cgagcgacgg caaccgccat gcgatttccc
     2941 acgatcgcgt caccgcgaaa agcgcagctg agatccagcc gaccaacggc ggctttgtcg
     3001 cgactcgttc gtgcggcgtg tgctgataga gccaatgacc ttccttgacc atttcgaatg
     3061 aggtgaatgc ctgcttcgct tgatcgtaat cgtcgagttg ccacggtaaa ttggagaccg
     3121 cgaatagaag gacgatcagt gccgcgacga tccagagcgt gcggcggtct tcgaataggg
     3181 tcatgtcgag ctgtagcgtg cgctgtcctc ggagcatttt gatgtgacgc caccgactaa
     3241 actccgctga ggacagcgga ctctacagca cagatctgcc gcgggttcaa tcacgccaaa
     3301 gcactgcgcg caccggtgcg ccatcggcac ccgcgatttt cagaggcagc gccgcaaaat
     3361 tgtaaatgcc gggagcgaca tcgctgagat cgagcgattc aatgatagcg atcccggcgc
     3421 tggcaagagc atggtgattc tgcaacgatt ttgaatcgag ctcgtccatc gacgggagat
     3481 ccacgccaag tagttttacc ccgttctttt gcaaccacgc cggaacatcg gccgcaatta
     3541 ctgggattcg atttggaaac actgtcgagt cgctccatcg gccggtcttt accaaaagcc
     3601 gtgaagttgc ggcgatctct tcggcatgcg gacggagatc ctcgcgagtg atcagatgtt
     3661 tctccgtcga ttgagaaaaa gtttccgaga gatcgactac ggttgcgcgg cccagataaa
     3721 tctcgagcga tgctttttcg atcggcgcgc cattcatctc gaaatgaaat cgggcatcgg
     3781 catgcgtgcc gttgtgcacg ctcatcgtga tagcgccgac atttacgctc gcgccttttg
     3841 cgatctcgtt cgtaacgcga taacgaaacg gttcgtcacc gggccattcg gcgaagtcat
     3901 tcgatagcgt tcgtgagatg tcccagatct tcatcgcgtt gtagaaggag cgcctgtctg
     3961 cagttcctca agaattgctc gcgcagctcg atcgctggcg ccggtgccgc cgagttggct
     4021 ggtagtcgca tcaaaatccg aaatcattcg atcacgcgcg ggtgagtctt ccattagcaa
     4081 ccggaccgcg tttacgatgg cgtctggttt tgcctcgtgc tgaataaact ccggaacgac
     4141 ttctttgcct gcaagcaaat taggcatgcc gagaaaatct acattcacga cgagacgcgc
     4201 tgccacgtac gtcggccagg caactttgta aatcagcacg aacggcattc caaaataagc
     4261 agcctcaagc gtggcgcttc ccgaggccac gattccaacg aaggcgcgct gcatgatggt
     4321 cgcagtctgg ccaaccgaga tttcaatcgt ttcgcgaccg gccaattgct cactcatctc
     4381 gcgtgcgagt tcaatagatg cagctgcgac ttggaagcgc aaagtcgggc tgagttgtaa
     4441 cagcc
//
LOCUS       DATDAJ010000363         2756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2039193, whole genome shotgun sequence.
ACCESSION   DATDAJ010000363 DATDAJ010000000
VERSION     DATDAJ010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2039193"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VIS53_09080"
     CDS             complement(<1..346)
                     /locus_tag="VIS53_09080"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5767974.1"
                     /translation="MKRYLITGASRGIGRAIAEKLAGKDVELLLHGRDTVALAQTRKV
                     VEPQCAKVTPLIHDLATARGVSDLIAKAGREPIDLLVNNAGIAIVKPFTEITSLEWDQ
                     TVGVNVTAPFLLT"
     gene            complement(441..1649)
                     /locus_tag="VIS53_09085"
     CDS             complement(441..1649)
                     /locus_tag="VIS53_09085"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: protein motif:HMM:NF013411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070497 -
                     6-carboxy-5,6,7,8-tetrahydropterin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HEY5767975.1"
                     /translation="MLLTVSKRLEFSASRRLNVADWTEKGNAAAFGSETNARYGSGRN
                     YTVYFVFTGPVDTATGMLINISEIKKRAGKVLRDRFDHKFLNHDNPSFRDVPPTAENV
                     AGQLYRDVAPLFSDAGTKLSVCHLSESPERSATYYFDGACEANFWFEFSAARRTMSPH
                     LSQEENARLFGPATAPHGHNYGCRLTFRAEQLDFKHPLVRYDEIDTCIRALRAELDHQ
                     YLNEVVGLKERPLTTESLAEYLYERVNSMMALHRVRLHERSDFFAEAWKDNTIFLGLQ
                     VPFYAAHRLHTATLSDAENMTLYGKCNNPTGHGHRYVTETTIGGEYDERSGTLYDFVA
                     LNEAIHESLKPWQDRHLDLETEDFRETPSTGENIVRALWPKIDNRVDHQLVRLRLWET
                     TNNRFTLRRT"
     gene            1755..2384
                     /locus_tag="VIS53_09090"
     CDS             1755..2384
                     /locus_tag="VIS53_09090"
                     /inference="COORDINATES: protein motif:HMM:NF013209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HEY5767976.1"
                     /translation="MKHIGWRERLFKSTRGRILDLLRTRDRTVNELAEELRLTDNAVR
                     AHLASLERDRLVVHSGMKPGFRKPHATYALGPEAEQLFPKAYGRLVSLLMSISSRQIN
                     PRNLRAGMRAAGQAVANEHLPELRGKTRQERIDAALGILKELGGAATFREEDGKHFIN
                     GNGCPIAAATANHPEACLLAESLLTELIGSPVKQHCVRSPTPACRFEVK"
     gene            2502..>2756
                     /locus_tag="VIS53_09095"
     CDS             2502..>2756
                     /locus_tag="VIS53_09095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767977.1"
                     /translation="MNTTVEQTHAAASTAADKIGSSPAYQAYRILHFGFVVAPILAGL
                     DKFFHLLVNWDQYLPAVVAKMSPVPAHTLMLVVGVIEIVAG"
BASE COUNT          613 a          757 c          750 g          636 t
ORIGIN      
        1 gcgttaacag gaacggcgca gtaacattca caccgaccgt ttggtcccat tcgagcgacg
       61 tgatctcggt gaatggtttc actatcgcaa tgcctgcgtt gttcacgagc aagtcgatcg
      121 gctcccgccc ggctttggcg atgagatcgg aaacgccacg cgccgtcgcg agatcgtgaa
      181 tcagtggcgt caccttcgca cattgcggtt cgacaacttt gcgcgtttgc gcgagcgcca
      241 cggtgtcgcg tccgtgcaac agcagttcca catctttgcc agcgagcttt tctgcaatgg
      301 cgcggccgat cccgcggctg gcccctgtga tgagatatcg tttcattgta actcaggcat
      361 catgcctgat cgtagagcag gcttccagcc tgccgttgcg ggcaagatgc ccgctcgacg
      421 ggtagggcag gatgtctgga ttacgtgcgc cgcaacgtaa accggttgtt tgtcgtttcc
      481 cacaggcgca atctcacgag ttggtgatcc acacgattat caatctttgg ccaaagcgcg
      541 cgcacgatgt tttcgcctgt cgaaggcgtc tcgcgaaaat cctccgtttc cagatccaaa
      601 tggcgatcct gccagggttt cagtgattca tgaattgcct cgttcaacgc aacgaaatcg
      661 taaagcgttc cgctgcgctc atcgtattcg cctccgatcg tagtctcggt cacgtagcga
      721 tggccgtgcc cggtcggatt gttgcactta ccataaagcg tcatgttctc ggcatcggaa
      781 agcgtcgccg tatgcaatcg gtgggcggcg taaaacggta cctgcagtcc caaaaaaatc
      841 gtgttgtctt tccatgcttc agcaaagaag tcggaccgct catgcaaacg aacccgatgc
      901 agtgccatca tcgaattgac gcgttcgtag aggtattcgg ccaggctttc agtagttagc
      961 ggacgttctt ttaatccgac tacttcgtta agatactggt gatcgagttc ggcgcgcaat
     1021 gcgcggatac aggtgtcgat ttcgtcgtag cgaaccaaag ggtgcttaaa atcgagttgc
     1081 tccgctcgaa atgtgagccg gcacccgtaa ttgtgtccgt gcggcgcagt agccggtcca
     1141 aataggcgcg cgttttcttc ctggctcaag tgcggcgaca tcgttctgcg cgccgctgag
     1201 aattcgaacc aaaagttcgc ttcgcaggcg ccgtcgaaat agtacgtcgc gctccgctcg
     1261 ggcgactcgc tcaagtgaca aacagacagc tttgttcccg cgtccgaaaa cagcggcgcg
     1321 acatcgcgat aaagctgacc ggcgacgttc tctgcagtcg gcggaacgtc gcgaaacgat
     1381 ggattgtcgt gatttaagaa tttgtgatcg aaacgatctc gtagaacttt tccagcccgc
     1441 ttcttaattt cgctgatatt gatcagcatt cctgttgctg tatcgaccgg accggtaaac
     1501 acaaaataga ctgtgtaatt gcgtccgctg ccgtagcgtg catttgtctc cgacccgaat
     1561 gctgccgcgt tccccttctc agtccaatcg gcgacgttca agcgtcgcga tgctgaaaat
     1621 tccaggcgtt tgctgacggt caggagcatg aggtcaaccc gtctcgccag atgcagaccg
     1681 caagagacac cgttaaacgg ggattagtca aacattcttt tgactttctc ctggcgtcca
     1741 tgatctttga tctaatgaaa catataggct ggcgggagcg gttgttcaaa agtacgcgag
     1801 gaagaattct ggaccttttg cgtacgcgag atcggacggt aaacgaactc gcagaagagt
     1861 tgcgcctgac tgacaacgcc gtgcgagcgc accttgccag cctggagcgt gacaggctcg
     1921 tagttcattc aggcatgaag cccggcttta gaaaacctca cgccacctac gcccttggcc
     1981 cggaagccga acaattgttt ccgaaggcat atgggcggct ggtctcgctt ctcatgtcga
     2041 tatcctcgcg gcagatcaac cccagaaatc tgcgcgccgg aatgcgagcc gcaggccagg
     2101 ccgtggccaa tgaacatctg ccagagttgc gtggcaaaac gcggcaggaa agaattgatg
     2161 ccgcactcgg cattctcaaa gaattaggcg gcgcggcgac gtttagggaa gaagatggga
     2221 agcacttcat caacggcaac ggctgcccaa tcgccgccgc aacggcaaat catcccgaag
     2281 cctgtctcct ggcggaatcg ttgctgaccg aattaatcgg ttcgcctgtg aaacaacatt
     2341 gcgttcgaag cccaacaccc gcctgccggt ttgaggtaaa atagcggctt cgcagcgccc
     2401 agagacgtcc actcatccgg cgagtttcgt atccgtatta ggaactaaat agtcaagtaa
     2461 tatattgact tattagaatt agatggaata aggtatggct tatgaacaca accgttgagc
     2521 aaacgcacgc cgcagccagc acggccgcgg ataagatcgg atcttcaccc gcttatcagg
     2581 cgtatcgaat ccttcatttc ggattcgtcg ttgccccgat cctcgcggga ctggataaat
     2641 tcttccacct gctggtgaat tgggatcagt accttcctgc tgtggtagcg aaaatgtcgc
     2701 ctgttccggc gcacacgctc atgctcgtcg tgggcgtgat cgagattgtt gcagga
//
LOCUS       DATDAJ010000364         5831 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2040807, whole genome shotgun sequence.
ACCESSION   DATDAJ010000364 DATDAJ010000000
VERSION     DATDAJ010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5831
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040807"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..204
                     /locus_tag="VIS53_09100"
     CDS             <1..204
                     /locus_tag="VIS53_09100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767978.1"
                     /translation="CVNLASLNLKPDQKTKIEAWQAECMKAGCTKQSRETFLTHAKGI
                     LSAEQFAQLKAQCKNMGASKKSA"
     gene            complement(274..723)
                     /gene="dtd"
                     /locus_tag="VIS53_09105"
     CDS             complement(274..723)
                     /gene="dtd"
                     /locus_tag="VIS53_09105"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEY5767979.1"
                     /translation="MRAVVQRVSRARVTVDGSVTGEITTGLLILLGVGRDDTSAIAVA
                     MAEKIANLRIFEDEQRKMNRSLLDVKGSALVVSQFTLYGDARGRRRPSFVAAAPPEQA
                     KNLYEEFAEALRKLGVTVATGVFGAMMSVELVNEGPVTILLDSDKTF"
     gene            complement(731..1846)
                     /locus_tag="VIS53_09110"
     CDS             complement(731..1846)
                     /locus_tag="VIS53_09110"
                     /inference="COORDINATES: protein motif:HMM:NF014336.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1/P1 nuclease"
                     /protein_id="HEY5767980.1"
                     /translation="MNFTRGGLFVAFAVIACRVSILAYGPLGHEIVGAIAGARLANTP
                     TAAKLYALLDGIRLEKAALIADEIKGWDKRGVDDPRSFHYSAHRNIDKQLRDFWRANQ
                     PTHDPNSPAPSHHWFHYTDVPVMPAQRYRDGYAGRCKWDVVHMIPFCIDVLQGRIPEQ
                     NDRKITKPVAIILLAHYVADIHQPLHVGAAYFDAQGHATDPDRDKSALADEGGNTFTI
                     ELSDEPPRRRGIRKKRFHGFWDYDTVNALFPQVPGSLPRVQLEMQIDPLKQQLVHDMA
                     THEPRNWQMPSNASIDSYAEIWADEILPIARDAHARLEFRNVKPFLDNDRIVAAGETI
                     EKRMPGQTLYRTWATRIVRDELHKAGWRLADLLEKML"
     gene            complement(1888..2643)
                     /locus_tag="VIS53_09115"
     CDS             complement(1888..2643)
                     /locus_tag="VIS53_09115"
                     /inference="COORDINATES: protein motif:HMM:NF014037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mut7-C RNAse domain-containing protein"
                     /protein_id="HEY5767981.1"
                     /translation="MKQFKVRLRFHRDLSIFLGSKAGDAVIERRLGEKTSIKDIIESC
                     GVPHPEVDLILVDEQTVGFDHPLANDAKVEVFPVENRGTARTEKQLQTVCIARFVTDG
                     HLGALTRNLRLLGFDVAYEQNADDRQLLEAMARENRALLTRDRRLLMHAIVQHGYYPR
                     SQNADEQTVEVVRRFNLSDLIAPFTRCLRCNAPLEEAAKADIIDKLEPLTKIYYDQFC
                     RCPDCKQIYWSGSHFPKLQKRIEEIRSRTRGQA"
     gene            complement(2645..3355)
                     /locus_tag="VIS53_09120"
     CDS             complement(2645..3355)
                     /locus_tag="VIS53_09120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767982.1"
                     /translation="MTKDEMTCLGMSLLARRLTPVAILIAQVLPSTAPQARADIPWPE
                     VVQRLTYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKPGLHGRK
                     YPRDFLRSVKKEGFGRITTPVNGRYYIAYNDGDSYAFASHATGGGGVLVPRYSAALKG
                     EHGGLRRGAVIETTSPEVQKIFGSNRWKIMDTGGGLRRWQIDCYFGEDEPLGPDKLQG
                     RPRATTFEYAYANAQIVD"
     gene            complement(3532..4620)
                     /locus_tag="VIS53_09125"
     CDS             complement(3532..4620)
                     /locus_tag="VIS53_09125"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEY5767983.1"
                     /translation="MRVELPLDHLPELWPNKFRRARIGALVHPASVSSKLEHTSRILE
                     QFSGDLFRLAAFFGPQHGFLGQTQDNMVEWKSYEHPRLRIPIYSLYGDHREPTAEMLE
                     SLDVLLVDLQDVGSRYYTFIWTLYLCMRACERCGIAVVVLDRPNPINGLTTEGPVLDP
                     NYKSFVGMHPIPVRHGRTIGELAQQFRDETFPKGQLSVLPMKNWQRAMWFDQTGLPWV
                     MPSPNMPTLDTATVYPGMCLFEGTNISEGRGTTRPFEIFGAPFIDAEKLCTELNSLKL
                     PGVFFRENYFQPTFQKFAGQLCGGAQIHVTDRERFQPFKTGIEIIQAIRSLYPDQFEW
                     KQPPYEYETEKLPIEILLGGPVREFFDA"
     gene            complement(4677..>5831)
                     /gene="lnt"
                     /locus_tag="VIS53_09130"
     CDS             complement(4677..>5831)
                     /gene="lnt"
                     /locus_tag="VIS53_09130"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEY5767984.1"
                     /translation="LIQITELTGVAGLSFVVAFVNVIVLTTAYRLVVEARTRVMRPHF
                     DFTITMAAIVGILIFGLRATQISPSTKLLRVAAVQSNVPQTQKFDPQFTRRIFDQFRR
                     LSEIALRSNPPPDLLVWPESSMPGPVLADQESYKFVMDLAASADTDLLLGTIDVDKRD
                     VYNAALLVSDGGEHVQMYRKVHLVPFGEYVPGRHTVPLLAQLVGDQVPGDFKGGREHT
                     VFTLTNSEVHVAPLICFEDTIGELTRQFVLPNETSPGANLLVDVTNDGWFQKSAGSHQ
                     HLANAIFRCIETRRPMIRAANTGVTCFINQFGRVTQILQDETGSTFTEGVLAGETKVP
                     IEQELTFYVRHGELFAKACAAITLVSIFVVFGVRRWKRGVRRGERLDIDG"
BASE COUNT         1320 a         1578 c         1563 g         1370 t
ORIGIN      
        1 tgcgttaatt tggcctcatt gaatctcaag ccggatcaga agaccaagat cgaggcgtgg
       61 caagccgaat gcatgaaggc aggctgcaca aagcaaagcc gtgaaacatt cctgacccac
      121 gcgaaaggaa ttctttccgc tgagcagttc gcgcagctca aagcacagtg caaaaacatg
      181 ggtgcttcga agaagagcgc ctgatttgaa accttttttt atttggaacc accgacgatt
      241 tcggtcaggg ctgtctgaca caatacgggc tgtttagaac gtcttgtcag agtccaaaag
      301 gatggtcacc ggaccttcgt tgaccaattc gactgacatc attgcgccga aaactccggt
      361 cgcgacagtg actcccaatt tgcgcagcgc ttccgcaaat tcttcgtaga ggttctttgc
      421 ttgttcaggc ggggctgcgg caacaaagct tggtctgcgt cgtccgcgcg cgtcgccata
      481 cagcgtaaac tgggacacaa cgagggcgct cccttttacg tccagcagcg agcgattcat
      541 ttttcgctgc tcgtcctcaa agatccttag gtttgcgatt ttctcggcca ttgccacggc
      601 gatggctgat gtgtcgtcgc gccccacacc gagcaggatc aaaagacccg tcgtgatttc
      661 tcccgtgacg ctgccatcca cagtaacgcg cgctcggctt acacgctgga caacggctcg
      721 catttgtcga ctacagcatt ttctccagca aatcggccaa acgccacccc gccttgtgca
      781 gctcatcgcg cacgatgcgg gttgcccacg tgcgatacag cgtttgacct ggcatccgtt
      841 tctcgattgt ctcgccagcc gcaacgattc ggtcgttatc cagaaatggc ttcacatttc
      901 gaaattccaa acgcgcatgt gcgtcgcgcg cgatcggcag gatttcgtcg gcccaaattt
      961 cggcgtaact gtcgatcgag gcattcgatg gcatttgcca attgcggggt tcatgcgtcg
     1021 ccatgtcgtg gaccagttgt tgcttcagag ggtcgatttg catctcgagt tgcactctcg
     1081 gcaaagagcc gggcacctga gggaagagcg cgtttacggt atcgtaatcc cagaacccgt
     1141 ggaatctctt cttccgaata cctcgccgac gcggcggttc atcgcttagc tcgatcgtaa
     1201 atgtgtttcc gccttcatcc gccaaggctg atttgtcccg gtcgggatcg gtcgcgtgtc
     1261 cttgtgcatc gaagtaggcc gcaccgacgt gcaacggctg atgaatatcc gcgacgtaat
     1321 gcgcgaggag aatgatggca acaggcttcg tgatcttccg atcgttttgt tcggggattc
     1381 gcccctgcaa gacgtcgatg cagaacggaa tcatgtgcac gacatcccat ttgcaacgac
     1441 ctgcgtatcc gtcacgatat cgttgcgccg gcatcaccgg gacatcagtg taatgaaacc
     1501 agtggtgcga aggcgcgggc gaattcggat cgtgcgttgg ctggttcgcg cgccagaaat
     1561 cacgcaactg tttgtcaatg ttgcggtgcg cggagtaatg gaacgaccgt ggatcgtcga
     1621 cccctctttt gtcccagccc ttaatttcat ctgcaattag cgcggccttt tccaatctta
     1681 ttccgtcgag taaggcatac agctttgcgg ctgttggcgt gttcgccagg cgcgcacctg
     1741 caatcgcgcc gacgatctcg tgtcctagcg gcccgtaagc aagaatcgaa acgcggcaag
     1801 cgatgacagc gaaagcaacg aaaagtccgc cacgagtgaa attcatcggg agcggattct
     1861 gtcagtttcg gtgagcgggt gacaagccta tgcttggcct cgagttcgcg agcgaatttc
     1921 ttcgatccgt ttttgcagtt taggaaagtg cgatcctgac cagtagatct gtttgcaatc
     1981 aggacagcgg cagaactggt cgtaatagat tttggtgagc ggctctagtt tgtcgatgat
     2041 gtcggccttg gctgcctctt ccaacggtgc gttacatcgc agacaccgcg tgaaaggtgc
     2101 gatcaaatcc gagaggttaa aacggcggac aacctcaaca gtttgttcgt cggcgttttg
     2161 cgagcgcggg taatatccgt gctgaacgat ggcgtgcatg agcagtcgcc gatcacgcgt
     2221 caagagcgct cgattttcgc gggccatagc ctcgagcaat tggcggtcat cagcgttttg
     2281 ttcgtaggcg acatcaaagc cgaggagacg aagattgcgc gtgagggctc ccaaatgtcc
     2341 atcagtcaca aatcttgcga tgcaaacagt ttgtaattgt ttctccgtgc gagccgtgcc
     2401 ccgattctca accggaaaaa cctctacttt tgcatcgttg gccagcgggt gatcaaagcc
     2461 gactgtctgt tcgtcgacca agatcaaatc aacctctggg tgcggaacgc cacacgactc
     2521 aatgatgtct tttatggacg tcttctctcc cagccgccgc tcgattactg cgtcgccggc
     2581 ttttgacccg agaaaaatac taaggtcgcg atggaagcga agccggacct tgaactgctt
     2641 cacgtcaatc tacgatttgg gcgttggcgt atgcgtactc aaaggtagtc gcacgcggac
     2701 gaccctggag cttgtccggc ccgagcggtt catcttcacc gaaataacaa tcgatttgcc
     2761 atcgccgcag accgccgccg gtatccatga tcttccagcg attgctgccg aagatttttt
     2821 gaacttccgg ggacgtcgtc tctataactg ctccgcggcg caagccaccg tgctctccct
     2881 tcaacgccgc cgaataacgc ggcaccagaa caccgcctcc acctgtcgca tgtgaagcaa
     2941 aggcgtatga atcgccgtcg ttgtaggcaa tgtaatatcg cccgttaaca ggcgtagtaa
     3001 ttcgaccgaa gccttccttt ttcacggagc gcagaaaatc gcgcggatat tttcggccgt
     3061 gcaacccagg tttcgtaacc ggcgtcgcgt cgaagccgcg ctcgaaagta aaacccgatt
     3121 ccttcggtgt gtaatagagc gtgcacacga cgaagtattc accgttgtgt ccctgcggac
     3181 gccgcgccag tttatcgttc tcatacgtga gccgctgtac gacttccggc catgggatgt
     3241 cggcacgggc ttgcggcgca gtcgagggta aaacctgcgc gatcaatatt gcgaccggcg
     3301 ttagtcggcg tgcaagcaag ctcatcccca aacacgtcat ttcatctttt gtcattctga
     3361 gcgaagcgaa gaatctctga tttaattctg gatccgatcg ccggaataaa tactgagatg
     3421 tttcgctccg ctcaacatga cagtgtgctc atggtgtttt gaaccaattt acctcgacca
     3481 ggaaactgta gcgaacctgt gaaattttta ctaacgctgt gcttttgctc actaagcatc
     3541 gaaaaattct ctcaccgggc cgcccaacaa tatttcgatc ggcaattttt ctgtttcgta
     3601 ttcgtaaggt ggttgcttcc attcgaattg gtctggatac aagctccgaa tggcttggat
     3661 gatttcaatg cctgttttaa acggttgaaa acgctcgcga tccgttacgt gaatttgcgc
     3721 gccgccgcag agttgaccgg caaatttctg gaaggttggc tggaaatagt tttcacgaaa
     3781 gaaaacgccg ggcagcttta agctgtttag ctcggtgcaa agtttctccg catcgataaa
     3841 tggcgcacca aaaatttcga atggccgcgt cgttccgcgt ccctcggaaa tattcgtgcc
     3901 ttcgaacaga cacatgccag ggtaaaccgt ggcggtgtcg agcgtcggca tgttgggtga
     3961 tggcatcacc catggcagac ctgtttggtc aaaccacatc gcgcgctgcc agtttttcat
     4021 cggcaggacg gacagttgcc ccttgggaaa tgtttcgtca cggaattgct gtgccagttc
     4081 gccgattgtg cggccatgcc gaacgggaat gggatgcatg ccgacaaagg atttgtagtt
     4141 gggatcaagt accggccctt cagtcgttag gccgttgatc gggttcggcc gatccagtac
     4201 aaccactgcg atgccgcatc tttcgcacgc gcgcatgcag agataaagcg tccaaataaa
     4261 agtgtaataa cgcgatccga catcctgaag atcgaccaat aacacatcca ggctttccag
     4321 catttctgcc gtcggttcac ggtgatcgcc gtaaagactg tagatcggaa tgcgcaaacg
     4381 cggatgctcg taacttttcc attccaccat gttgtcctgt gtctggccta aaaatccatg
     4441 ttgagggcca aaaaaggcgg cgaggcgaaa caaatcgcca ctgaactgct ccaaaattcg
     4501 tgatgtgtgt tcaagcttcg acgaaacaga agccggatgg acgagcgcac cgatgcgtgc
     4561 gcggcgaaat ttgttaggcc aaagttctgg caaatgatca agcggcagtt cgacacgcat
     4621 tcgtgctctt gtatcacact gcgaaaattc ctgcgaattg taacggcggc tgtgggtcag
     4681 ccgtcaatgt ccaggcgttc gccacggcga acccctcgtt tccaacgacg tacgccgaaa
     4741 acgacgaaaa ttgaaacgag cgtgattgct gcgcacgctt tcgcgaatag ctcgccatgt
     4801 cggacataaa aggtcagctc ttgttcgatc ggcactttgg tctcgccggc aagcacgccc
     4861 tcagtaaagg tgctgcccgt ttcatcctgg agtatctgag tgacgcggcc aaattggttg
     4921 ataaaacagg tcacgcccgt attcgccgcg cgaatcattg gccgacgcgt ttctatgcag
     4981 cgaaagattg catttgccag gtgctgatgc gatccagcgg acttctgaaa ccacccgtca
     5041 ttcgtcacat ctacgagtag gttcgcaccg ggactcgtct cgtttggaag gacgaattgt
     5101 ctggtgagct cgccaatcgt gtcttcgaaa cagatcaacg gagccacatg gacctcgctg
     5161 ttggtcagag tgaacacggt atgttctctt ccccctttga aatcgccggg tacctgatcg
     5221 cctacaagct gcgcaagcag cggcactgta tggcgaccgg gaacgtattc gccaaaaggt
     5281 accaggtgga cctttcggta catttgcacg tgttcgccgc catcggaaac gagcagcgct
     5341 gcgttgtaaa cgtctcgctt gtctacgtcg atcgttccca acaggaggtc cgtgtccgcc
     5401 gatgcggcca aatccatgac aaatttgtag ctctcctgat ctgcgagaac tggcccgggc
     5461 atcgagctct ccggccaaac caacaaatca ggtggaggat ttgagcgaag cgcgatttcg
     5521 ctcaatcggc ggaattgatc gaaaattctc ctggtgaact gcggatcgaa cttttgagtt
     5581 tgcggaacgt tcgattgcac cgcggcaacg cgaagtagtt ttgtggacgg cgaaatctgg
     5641 gtcgcgcgga gtccgaaaat caaaatgccc acaatggccg ccattgtgat ggtgaaatca
     5701 aaatgcggtc gcatcacgcg tgtgcgcgct tcgacaacca ggcgatacgc ggtcgtgaga
     5761 acgatcacat ttacaaacgc aaccacgaac gacaacccgg caacaccggt gagctcagtg
     5821 atttgaatca a
//
LOCUS       DATDAJ010000365         2614 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2041374, whole genome shotgun sequence.
ACCESSION   DATDAJ010000365 DATDAJ010000000
VERSION     DATDAJ010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041374"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..968)
                     /locus_tag="VIS53_09135"
     CDS             complement(75..968)
                     /locus_tag="VIS53_09135"
                     /inference="COORDINATES: protein motif:HMM:NF024685.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIR2 family protein"
                     /protein_id="HEY5767985.1"
                     /translation="MTSELQEADWNRLLRRIQSGKCTPFLGAGACYGALPLGADVAEE
                     LAQRYAYPFPDRDLVRVAQYAAVQSDPNAPKEDVVDILRAAGPPKYNQPPQFGNSGEP
                     HSVLAGLPLPIVITTNYDDFMVRALKWKLKDPRREICRWQDILQHVESIFEKEPGYKP
                     TPANPLVFHLHGALDVSESLVLTEDDYLTFLANVAAKPDLLPEVVQQAFAATSFLFIG
                     YRLGDWNFRVLFQTLRARQQFSSIVVLKPPDETDPNRAAHQAYFEKFYGALDMKVFWG
                     TAREFSSQLDERWTTFEQTKK"
     gene            1211..1984
                     /locus_tag="VIS53_09140"
     CDS             1211..1984
                     /locus_tag="VIS53_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5767986.1"
                     /translation="MNGKNGHGGAGEPREFVTTRWSLILSAARLGSEEQRIRDALAEL
                     CRTYWRPIFSFIRGRGYSVEDAQDLTQDFFVTILKNNWLQHADRNRGRFRSLLLKSLQ
                     NFLVNAAEKAHAHKRGGGVEFISWDDWMAEAPSQLSIPVQALDSLPPERIFDLTWATT
                     VVEHAFQRLREECESKGKLWLFQALSSHLTDERDEVSYAKLSAELGMAEAAVKKQLHN
                     MRQRYRSLLRDEVSQTVEDPADVDDEIRYLCASLATGTE"
     gene            1990..>2614
                     /locus_tag="VIS53_09145"
     CDS             1990..>2614
                     /locus_tag="VIS53_09145"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY5767987.1"
                     /translation="MTDSDPRSDPLPSATKEHAKCEKCGATMRLDTGICVSCLLREGL
                     ESGDKVSQAFYQSVLAEVDAPHKSWFLGNYEILEQIGCGGMGVIYRARQRHSRRIVAV
                     KRVLSYRADSHEALQRFRREAQAVASLDHPNILPIYEVSESEDGLPFFSMKFAEKGSL
                     QENATSLRDEPRKCVQLMAKVAHAVDYAHSRGVLHRDLKPGNILLNDR"
BASE COUNT          628 a          705 c          716 g          565 t
ORIGIN      
        1 agtcttatcg tccaactcgc ggccgctctt cgacgggaga acatcctttg attcggcggt
       61 aaccgggtca gcgctcattt tttcgtttgt tcgaaggttg tccagcgctc atccaactgc
      121 gatgaaaact ctcgggctgt cccccaaaaa accttcatgt ccagggcacc gtaaaatttt
      181 tcgaaatacg cctgatgcgc cgcgcggttt ggatcggttt catctggagg cttcaagacc
      241 actatgctgc tgaattgttg ccgcgcgcgt aaagtctgaa agagaacgcg aaaattccag
      301 tcgcccaaac gatagccaat gaacaaaaaa ctggtggcgg caaacgcctg ttgcacgacc
      361 tcggggagaa gatctggttt ggcggccacg ttcgcgagga acgttaaata atcgtcttcg
      421 gtcaaaacga gcgactcgga aacgtcgagc gcgccatgca aatggaacac gagcggattg
      481 gccggcgttg gcttgtagcc aggctctttt tcgaaaatcg attccacatg ctgcagaatg
      541 tcctgccagc ggcagatctc tcggcgcggg tctttcaatt tccatttaag agcgcgaacc
      601 atgaagtcgt cgtaattcgt cgtgatgaca attggtagcg gaagaccagc aagaacgctg
      661 tgcggttcac cggaattccc aaactgtggc ggttggttgt actttggcgg accggcggcg
      721 cgcagaatat ccacgacgtc ttcttttggc gcgttcgggt cggattgtac agccgcgtac
      781 tgcgcaacac gcacaagatc ccgatccgga aacggatagg catagcgctg tgcgagctct
      841 tcggcgacat cggctccaag agggagcgcg ccatagcagg cgccagctcc taaaaaagga
      901 gtgcacttcc ccgattgaat cctgcgcagg agccgattcc agtccgcttc ttgaagttca
      961 ctcgtcacat caaacagact aacgaacggg gatgatgatt aaggattttt gcgtacgatg
     1021 tcaataccgc tatttacaga taaaattcca tagtggatcg attgagcatc cacctttcgt
     1081 taggcaatca agccgcacac cccctgaaaa cctggcgatc cgatccacgt tgtacatcca
     1141 gccaccttcc gcagatcgtg cgataacact ttatgcttgt gcggatgaag gagtaccaca
     1201 atgttcattc gtgaacggga agaacggcca cgggggtgca ggcgaaccgc gtgagtttgt
     1261 aactacccgc tggagcttaa tcctttcggc cgcccgctta gggagtgaag aacagagaat
     1321 tcgcgatgcg ctggccgaac tttgccggac ttattggcga ccgatttttt cgtttatccg
     1381 cggccgcggt tattcagttg aggatgcgca ggacctcacc caggattttt ttgtgactat
     1441 tctgaagaac aactggctgc agcacgcaga tcgtaatcgc gggcggttcc gctcgctctt
     1501 gctcaagtcg ctccaaaatt ttcttgttaa tgccgcggag aaagctcatg cccacaaacg
     1561 cggcggcggc gtggaattta tttcctggga cgattggatg gcggaagcgc cgtcgcaatt
     1621 atccatcccg gttcaagcac tcgactccct gccgcctgag cgcatcttcg acctcacttg
     1681 ggcgacgacg gtcgtggaac acgcgtttca acggctgagg gaagaatgcg aaagcaaagg
     1741 caagctctgg cttttccagg cactaagttc ccatcttaca gacgaacgcg atgaagtgtc
     1801 atatgcgaaa ttatccgcgg aactaggaat ggcagaagcg gccgtgaaaa aacagctgca
     1861 caacatgcgt cagcgttacc gcagtctgct gcgcgatgaa gtctcgcaaa ctgtcgaaga
     1921 ccctgccgac gtggacgacg aaatccgtta cctctgtgcg tcactcgcaa caggaaccga
     1981 gtaattgcaa tgacagattc agatccacgc tccgatccgc ttccgagcgc taccaaagaa
     2041 cacgcaaaat gcgagaagtg cggagcaacg atgcgcctcg acaccggaat ttgcgtgagt
     2101 tgcctcctgc gcgagggatt ggaaagcggt gacaaggtat ctcaggcgtt ttatcaaagt
     2161 gtcctcgccg aggtggacgc gccgcacaag tcctggttcc tgggaaatta cgaaattctc
     2221 gagcagatcg gttgcggcgg catgggcgtg atctatcgcg caaggcaacg acattctcgg
     2281 cgcatcgtcg cggtaaagcg cgtccttagt tatcgcgctg attcacacga agcgctgcag
     2341 cgtttccgac gagaagcaca ggcggtggca agtctggatc acccgaacat ccttccgatt
     2401 tatgaagtga gtgaaagcga ggacggcctc ccgtttttca gcatgaaatt cgccgagaag
     2461 ggaagcctgc aagagaacgc gacttctctc cgcgatgaac cgcggaagtg cgtgcaactc
     2521 atggcaaaag tcgcgcacgc tgtcgactac gcccacagcc gtggagttct ccatcgcgac
     2581 ctaaaaccgg gaaacattct gctcaacgat cgag
//
LOCUS       DATDAJ010000366         7421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2042400, whole genome shotgun sequence.
ACCESSION   DATDAJ010000366 DATDAJ010000000
VERSION     DATDAJ010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7421
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042400"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..677)
                     /locus_tag="VIS53_09150"
     CDS             complement(<1..677)
                     /locus_tag="VIS53_09150"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY5767988.1"
                     /translation="MKTENHRVLIIDDERPVLMTVDALLKRHGYHVDAAPTASQGLKL
                     LKSNSPSLVLLDLQLPDAHGLEMLDRIKTELPKAQVIILTAHDSLHNAIESIKRGAYH
                     FISKPYAPEELLSLVEKALEKQFLLREAEQLREKTEQLEKRLEIAEARPAPIFKSKPM
                     QEIEELIGAMAPSDANVLIAGESGVGKEVIANTIHARSRRAEQAMVKLNCAAFPQTMI
                     EGELFGYV"
     gene            complement(749..1468)
                     /locus_tag="VIS53_09155"
     CDS             complement(749..1468)
                     /locus_tag="VIS53_09155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767989.1"
                     /translation="MAGDSSEAPTHSLTVPWSDTVRFVRQLSHDLRNDLNAIELQSAY
                     IGELTQDQELTSEIKRLREVVSGMNSTLQLLSKAVGEVALNLVTYPAGEFMADMRTQI
                     ERKFSKENHEITWDVQIQDGMLNIDPQLFQEVFVELFANAFQHDRGKGALVARARISD
                     GRFLFSFHEPKAVFSSDMQNWGREPFRNIRQRHYGLGLNRVRAIIEAHGGRLQAQYDP
                     KAATLISTVALPISSPKSKNG"
     gene            complement(1477..3057)
                     /locus_tag="VIS53_09160"
     CDS             complement(1477..3057)
                     /locus_tag="VIS53_09160"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEY5767990.1"
                     /translation="MASSSLWQRFQRYFLEYRELGFSLDISRMKFPDDLFEKLRPQIE
                     HAFAAMRELEAGAIANPTENRMVGHYWLRNPALAPTPQIRSEIEDTIRRIKAFAKDVQ
                     AGKITAENGTRFKHVLHIGIGGSALGPQFVSAALDAPDDPMDIFFFDNTDPEGFDRVF
                     DRIGEGLPKTLVIVVSKSGGTKETHNGMLEAEAKFAAKGLQFAKHAVAVTGVGSELDK
                     HAEANGWLARFPMPDWIGGRTSVMSAVGLLPMALQGFDIDAFLAGAAAMDERTRLSDA
                     AQNAAMLLALMWYYAGNGKGEKDMVVLPYKDRLALFTKYLQQLVMESLGKEKNVASET
                     VHQGIAVYGNKGSTDQHSYVQQLRDGVMNFFVTFVEVRNDRRGARFEVDDGITSGDYL
                     EGFLRGTRSALYEKGRESITMSIPEVNAFYVGALIALYERAVGFYGSLTNINAYDQPG
                     VEAGKKAASKLLQLQKQVREELSGEEKTAEEIARSIDADPEDVFHLLRHLASNDARIK
                     VAAGDEAADDRFSLGQSE"
     gene            complement(3176..4390)
                     /locus_tag="VIS53_09165"
     CDS             complement(3176..4390)
                     /locus_tag="VIS53_09165"
                     /inference="COORDINATES: protein motif:HMM:NF017321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEY5767991.1"
                     /translation="MQDLFEEAQEIETENTAAPLATRMRPRSLEEFVGQEHILGPGKL
                     LRRAIEADRLPSVIFYGPPGSGKTTLARVIAEMTHAKFVRISGVESNVAEMRRVLAAA
                     TNRLRTSGQKTILFVDEIHHFNKAQQDILLPDVEAGNLRLIGATTYNPFFYVNSALVS
                     RSQVFRLEPLSVEQLEQLIDRALTDKERGLGNYNVKMDRDARRHLAKLSDGDARKCLN
                     ALEIGVLTTPPKVARPSSVASGRRASEDACPTIRFTLAVAEESIQQKAVIYDRAGDAH
                     YDTISAFIKSMRGSDEKGAMYWLAKMLHAGEDFRFIARRIVIFASEDVGLADPEALQL
                     AIATQQAVEFVGMPEARIPLAHATAYMCHAPKSREAYDSLNAATEQIEAEQTKAVPED
                     LKNKHFPINPES"
     gene            4514..6823
                     /locus_tag="VIS53_09170"
     CDS             4514..6823
                     /locus_tag="VIS53_09170"
                     /inference="COORDINATES: protein motif:HMM:NF015714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEY5767992.1"
                     /translation="MKLLSAPRQPFVGLALMAATGIIVAEIVPLAPTALISVAIALGI
                     CILIALCWPKLAATYLIVVAGFFLLHTFATTNTAGQQLADKLGERPRVVTAVGCVITE
                     PKISPSGFATFLLKLRLIELESKTESTRAVWQVRWKGAPEFGDELKLFGTAEPIAPPR
                     NPGEFDMRVYLARHDVRRMLFARYAEDGTLIRHGGGNPILRAAQASRTWMQNALCRGL
                     ADAPEVKSFISGIVLGIRHETPEDIEEPFQQTGTIHLFAVAGLHVGIVAALLWVLAAI
                     ARLPRKRAAAFIIPSLFFYAAVTGLHIPALRAAVMASILVGSYFFERRVFLPNSLAAA
                     AFFILCWNTNELFSTGFQLSFAVVGAIVLFADPLFRLFQQRAAPDPFLPQSLVRGPRR
                     WMHSSYEWLCGGASVSLAAWIGSLPLILWYFHLVTPISLLANLVVVPIAFFVLAVALL
                     SLMTTPLLPWVAIVFNNANWTLGTLVIGIVHLFAQIPGGHFYVGEPDWGGRISAKVTV
                     LDLGAGAAVHVRVNGHDWLVDCGSERSYERIVRKYLHWAGVNRLTGLVLTHGDSQHIG
                     GVTQLLSDFPGVRVIDNPAPDRSLIHRRLSRMVSELERRGRKPVELAAGDNFDLSREV
                     MAHVLFPSLGFAGATADDQALVIRLSVTPGTSVLFMSDNGTETERALLSNGSDLQSDI
                     LVKGQHHSGFSGSAPFLDAVRPRLIIATSKEFPEHERISEQWAEQLRLRGIKLFRQDE
                     SGAVELNFSGNEWSARAYLTGEVFRSVSR"
     gene            complement(6784..7389)
                     /gene="trmB"
                     /locus_tag="VIS53_09175"
     CDS             complement(6784..7389)
                     /gene="trmB"
                     /locus_tag="VIS53_09175"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: protein motif:HMM:TIGR00091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEY5767993.1"
                     /translation="MPTFSPVIELVPELQVARLAVAELFGRSAPLHVDLGCGDGCFLC
                     EIAQQFPNRNFLGIDRLTKRVEKVRRKAEKIENVRVLRADTLFAVRYLLPAGSVETFY
                     LLFPDPWPKRRHQFRRIFTRDFLDAIAAALEKHGVLRVATDHLDYFHQIERLSLTHVR
                     FQVVPRSPDDAILPVTKFEKKFRKQGASIHRLTLRKTSPVR"
BASE COUNT         1512 a         2119 c         2015 g         1775 t
ORIGIN      
        1 acgtaaccga aaagttctcc ctcgatcatt gtttgcggga acgcagcgca attgagcttc
       61 accatcgctt gttcagcgcg ccggctgcgg gcgtgaatag tattggcgat cacttccttg
      121 cccacgccgc tttcgcctgc gatgagaacg ttcgcatccg agggcgccat cgccccgatc
      181 agttcctcaa tctcctgcat cggtttgctc ttaaaaattg gggcaggtcg cgcttccgcg
      241 atttcgagcc gtttctccaa ttgctccgtt ttctctcgca gttgttcagc ttcccggagc
      301 aggaactgtt tctccaacgc tttctccacc aggctcagaa gttcctccgg cgcatacggc
      361 ttgctgataa aatggtaagc cccgcgtttg atcgactcga tggcattatg cagcgagtcg
      421 tgcgccgtca ggatgatcac ctgggctttg ggcagctccg tcttgatccg atcaagcatt
      481 tccaacccgt gcgcgtccgg cagttgcagg tctagcaaaa caagcgatgg cgaatttgat
      541 ttcagcaact tcagcccctg cgacgctgtg ggcgcggcat ccacgtgata accatggcgc
      601 ttgagtaagg cgtcaaccgt catcaacacc ggccgctcgt cgtcgatgat caggacgcga
      661 tggttctccg ttttcattct tttgcgctgc tggtactacg cacgtgcagc gggctacagt
      721 tgcttaaacc gcgagaatgt catgaagttc aaccattttt ggatttcggg ctcgatatcg
      781 ggagtgccac cgtcgaaatg agcgttgccg ccttggggtc gtattgagcc tgcaaccgtc
      841 cgccgtgcgc ttctatgata gcgcggacgc gattcagacc aaggccataa tgcctctgtc
      901 tgatgttgcg gaatggttcc cgcccccaat tctgcatatc cgaagagaaa actgcttttg
      961 gttcgtggaa gctgaacagg aaccgcccat cgctgattct ggcccttgca accagtgcgc
     1021 ccttgccgcg atcgtgctgg aaagcgttgg caaaaagctc cacaaatact tcctggaata
     1081 gctgcggatc aatattcagc atcccgtcct gaatttgcac gtcccatgtg atctcgtggt
     1141 tttcttttga aaacttacgc tcgatttgcg tgcgcatatc ggccataaat tcacctgccg
     1201 gataagtaac caaattcagt gcaacttctc cgactgcttt cgaaagcagt tggagcgtcg
     1261 aattcatccc tgagacgact tcacgcaaac gcttgatctc acttgtcagc tcctgatcct
     1321 gcgtcagttc accgatgtaa gccgactgca gctcgatcgc gttcaaatca ttacgcaaat
     1381 cgtgactgag ttgtctgaca aaacgaaccg tgtcgctcca cggcaccgtc aatgagtgcg
     1441 tcggagcttc tgaagaatcg cctgccataa ttatatttac tcggattgtc ccagcgaaaa
     1501 ccgatcatcc gcagcttcat cgcccgccgc gaccttgatc cgcgcatcgt tgctcgccag
     1561 atgccgtaac aagtgaaaaa cgtcctccgg gtcggcatcg attgagcgcg cgatttcttc
     1621 tgcagttttc tcttcacctg aaagttcctc gcgcacttgc ttctggagct gcaatagttt
     1681 gctcgctgct ttcttgcccg cttcgacgcc gggttgatcg tacgcattga tattagtcag
     1741 cgagccgtaa aagccgactg ctcgttcata aagcgcgatc agtgctccga cgtaaaaggc
     1801 gttcacctcg ggaatgctca tggtaattga ttcccgtccc ttctcgtaca acgcgctgcg
     1861 ggtcccgcgc agaaatccct cgagataatc gccgctggta atgccatcat cgacttcaaa
     1921 ccgcgccccg cgacgatcgt tgcgcacttc cacaaaagtc acaaaaaaat tcatgacccc
     1981 gtcgcgcagt tgttgcacgt atgaatgctg gtcggttgag cctttattcc cgtacacggc
     2041 aatgccctga tgcacagttt cgctcgcaac gttcttttct ttgcctaacg attccatcac
     2101 gagttgctgt agatatttgg tgaacagtgc cagccgatct ttgtatggga gaacgaccat
     2161 gtccttctcg ccttttccat tgcccgcgta ataccacatg agtgcgagaa gcatggcagc
     2221 attttgcgcg gcgtcggata ggcgggtgcg ttcgtccatg gccgcggcgc cggcgaggaa
     2281 agcatcgata tcaaagcctt gcagcgccat gggtaatagc ccgacggcac tcatcaccga
     2341 cgtgcgtccg ccaatccaat caggcatagg gaaacgcgcg agccagccat tcgcttcggc
     2401 atgtttgtcc aactcgcttc caacgccggt cacagcgaca gcgtgcttgg caaactgaag
     2461 tcctttcgca gcgaacttcg cttccgcctc gagcattccg ttatgtgtct ctttcgtccc
     2521 gccggacttt gacacaacga tgacgagcgt tttcggaagc ccctctccta tccggtcaaa
     2581 cacgcgatca aaaccttcag ggtcggtgtt atcgaagaaa aaaatgtcca ttggatcgtc
     2641 tggcgcgtcg agtgcggctg acacgaactg cggccctagc gctgagccac cgatcccaat
     2701 gtgcagcacg tgtttgaagc gcgttccgtt ttccgcggtg atttttccgg cctgaacatc
     2761 tttagcgaat gctttgatgc gccggatcgt gtcttcgatt tccgaccgga tttgcggtgt
     2821 cggcgcaagg gcgggattcc tcagccagta atgaccaacc attcggttct ctgttgggtt
     2881 agcaattgct cccgcctcca attcccgcat cgctgcaaac gcatgctcaa tttgcggccg
     2941 caatttctca aacagatcgt ccggaaattt catccggctg atgtccaaag agaaaccgag
     3001 ttcacgatat tccaggaaat accgttgaaa tcgctgccag agtgaggaag aggccatgtg
     3061 gtgagaatac cgaagtgaaa ttcgattgcg gcgtcaagtc gcgacaataa cttcgtcttc
     3121 cttcatgagt gcacgacggc ggcaaacgag aagtttcgac gctaaagaat gttccttagc
     3181 tctccggatt tatcgggaaa tgcttgttct taagatcctc gggcacggct ttggtttgct
     3241 ccgcctcgat ctgttcggta gcggcattca atgaatcgta cgcttcgcgg cttttgggtg
     3301 cgtggcacat ataagcggtc gcgtgcgcaa gaggaatacg cgcctccggc atcccgacaa
     3361 attccaccgc ttgttgcgtc gcaatggcaa gctgcaacgc ttcggggtca gcaagaccaa
     3421 cgtcttcact tgcgaaaatc acaatacgcc gcgcgatgaa acgaaaatct tccccggcat
     3481 gcagcatttt tgccagccag tacatcgcgc ctttttcgtc cgaaccgcgc atgcttttga
     3541 tgaacgcgct gatggtgtcg tagtgggcgt cgccggcacg atcgtaaatg acagccttct
     3601 gctggatgct ttcctcggca acggcgagcg tgaaacgaat tgtagggcaa gcgtcctcgc
     3661 ttgcccttct cccggacgca accgaggacg gtcgcgctac tttcggaggc gtggtcagga
     3721 cgccaatctc gagcgcattt aaacatttgc gcgcgtcgcc gtcgctcaac ttcgccagat
     3781 gccggcgcgc gtccctgtcc atcttcacgt tgtaatttcc aaggccgcgc tctttgtcgg
     3841 ttagcgcgcg atcgatcaat tgctccaatt gttcaacgct gagcggttcg agtcgaaaga
     3901 cctgtgagcg cgatacgagc gcgctgttga cgtaaaagaa cggattgtac gttgtcgcac
     3961 cgatgaggcg tagatttcca gcttccacgt caggcaaaag gatatcctgt tgcgccttgt
     4021 tgaaatgatg gatctcatcg acaaacagga tcgtcttttg tccagacgtc cggagacgat
     4081 tcgtggccgc ggcaagcaca cggcgcattt cggcgacatt gctttccacg ccgctgatcc
     4141 gaacgaattt cgcgtgcgtc atctcggcaa tgacgcgcgc cagcgtggtc tttccgctgc
     4201 cgggcggtcc ataaaaaatc accgagggca ggcgatcagc ttcaatcgcg cgacgcaaaa
     4261 gtttgccagg cccaagaatg tgttcctggc cgacaaattc ctcgagcgag cggggccgca
     4321 tccgtgtggc aagcggcgcg gcggtgtttt cagtttcaat ctcctgcgct tcctcgaata
     4381 agtcctgcac gttagaaatt acggcgcgct cgtgacgcaa gcaatcatac ttcgtctaag
     4441 tgcatcgtcc tgcgtcgcgc gaacatattg cagcttgcgc tgcgaacgcg cgataagcga
     4501 aaacttcgag tagatgaagc tgctcagcgc gccgcgtcag ccatttgttg gtctggcgtt
     4561 gatggctgcg acgggaatta tcgtggccga gattgttccg ctggcgccta cagcgctgat
     4621 ttcagtggcg atagctctcg gaatctgcat cctgattgcg ctctgctggc cgaaattagc
     4681 tgcgacctat ttgattgtcg tggctggttt tttcctgctg cacacgttcg cgacaacgaa
     4741 cacggcaggc cagcagctcg cggacaaact tggcgagcgg ccgcgcgtcg tcacagcagt
     4801 cggatgcgtg atcactgagc cgaagatttc gcccagcgga ttcgcaacct tcctgctcaa
     4861 actgagatta attgaactcg aaagcaaaac cgaatctacg cgtgcagtct ggcaggtccg
     4921 ttggaaaggc gcgccggagt tcggcgatga actgaagctt tttggaaccg ccgagccaat
     4981 cgcgccgccg cgaaaccctg gcgaattcga tatgcgcgtt tacctggcac ggcatgatgt
     5041 ccgtcgaatg ctcttcgccc gttatgcaga agacggcacg cttatccgcc acggcggcgg
     5101 caatccgatc ctgcgcgctg cacaagcgtc gcgcacatgg atgcaaaatg cgctgtgccg
     5161 cggcctggcc gatgcgcctg aggtaaaaag tttcatcagt gggatcgtgc ttggcatccg
     5221 gcacgaaacc ccggaggaca tcgaggagcc gtttcagcaa accggcacga ttcatctttt
     5281 cgccgtcgcc ggcttgcatg tgggaattgt ggcggcgctt ttgtgggtac tggctgcgat
     5341 cgcacgcctg ccgcgcaagc gcgcagcggc attcatcatt ccctcgctct ttttctatgc
     5401 ggcggtaaca gggttgcaca ttccggcttt acgggcggcc gtgatggctt caatcctcgt
     5461 cggcagttac ttcttcgaac gacgagtatt tttgccaaac agcctggcgg cagcggcgtt
     5521 tttcattctc tgctggaaca cgaacgaact gttttccacc gggttccagc tttccttcgc
     5581 ggtggttggc gcaattgtgc tgttcgccga tccgttgttc agacttttcc agcagcgtgc
     5641 ggctccggat ccttttctgc cgcaaagcct ggtgcgcggt ccacgccgat ggatgcattc
     5701 cagctatgaa tggctttgcg gtggcgcatc tgtgtcgctt gcggcgtgga ttggttcatt
     5761 gccgttgatt ctttggtact tccacctggt cacaccgatt tctttgctgg caaacctcgt
     5821 cgttgtcccg atcgcattct ttgtcctcgc cgttgcgctt ttgtcgctaa tgactacgcc
     5881 cctcctcccg tgggtcgcta ttgtcttcaa taacgccaac tggacattgg gcacgctggt
     5941 catcgggatc gttcatctgt tcgcgcaaat tcccggcggg cacttttatg tcggcgaacc
     6001 tgactggggc ggccggatat ctgcaaaggt aaccgtgctg gacttgggcg ctggcgcggc
     6061 cgttcatgtc cgggtgaatg gacacgactg gttagtcgat tgcgggagcg aacgcagtta
     6121 cgagcggatc gtgcgcaagt atttgcactg ggctggcgtg aatcggctca ccggattggt
     6181 gctcacgcat ggcgattctc agcacatcgg tggcgtgacg caattgttga gcgatttccc
     6241 aggagtccgt gtgatcgata accctgcgcc cgatcgctcg ctcattcatc gacggctgtc
     6301 tcgaatggtg tcagaactgg aacgacgcgg gcgcaaacct gttgaactgg ccgccggaga
     6361 caattttgat ttgtcccgcg aagtcatggc ccacgttttg tttccctccc tcggctttgc
     6421 aggagcgacg gcggacgatc aagcgttggt tatccggtta tccgtcacgc cgggcacatc
     6481 tgttttgttc atgtcagaca acggcacaga aaccgagcgc gcgttgttga gtaatggttc
     6541 ggatctgcag agtgacatcc tagtgaaagg tcaacatcac tctggcttct ccggttcggc
     6601 tccgtttctc gacgcggttc gaccacgctt aatcatcgcg acctcgaagg aatttccgga
     6661 gcacgaacgg atcagtgaac agtgggcaga gcaacttcgc ctccgcggca ttaaactgtt
     6721 tcgccaggac gaaagcggcg ccgtggaact gaacttctca ggcaacgaat ggagcgcgcg
     6781 agcctatctg accggcgaag tctttcgaag cgtcagccga tgaatcgacg cgccttgctt
     6841 gcgaaatttt ttctcgaact tcgttaccgg aagaatggcg tcgtccggcg atcgcgggac
     6901 aacttgaaat cgcacgtgag tgaggcttag ccgttcgatt tgatgaaagt aatcgaggtg
     6961 atcggtcgcg acgcgcagca caccgtgttt ctcaagcgca gcggcgattg cgtccaaaaa
     7021 gtcgcgcgtg aaaatccgtc ggaactgatg gcgccgcttc ggccacgggt cgggaaacaa
     7081 aagataaaaa gtttcaaccg aacctgcggg cagcaggtag cgcacggcga acaaagtgtc
     7141 cgcgcgcagc acccgcacgt tttcaatctt ctcggccttc cggcgaactt tctcgacgcg
     7201 ctttgttaac cggtcgatgc cgaggaaatt tctgttcggg aactgttgcg ctatttcgca
     7261 gagaaaacac ccgtcgccgc atccaagatc gacgtgcagc ggcgcgctgc gtccaaaaag
     7321 ttccgcaaca gccagacgcg cgacctgcaa ttccggcacg agttcgatca cgggagaaaa
     7381 tgtcggcatc tgggcgatgc ttcaaccccc ggcaagatcc g
//
LOCUS       DATDAJ010000367         2833 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2042566, whole genome shotgun sequence.
ACCESSION   DATDAJ010000367 DATDAJ010000000
VERSION     DATDAJ010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2833
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2042566"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..772)
                     /locus_tag="VIS53_09180"
     CDS             complement(8..772)
                     /locus_tag="VIS53_09180"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5767994.1"
                     /translation="MSFKDHFSAQAAAYAKFRPGYPRGLFDYLGSTAPSRQVAWDCGT
                     GNGQAAVGLASVFDRVIATDASEKQIANAQSHKRVEYRVAPAENSGIGTETIDLIMVA
                     QALHWFDLDRFYAEACRVLKSDGVLAASAYNLLHVEPAIDEVVNRYYYEVVGPFWPLE
                     RKLVEQFADLPFPFHKVDAPKFEMTAQWNLDHLLGYLQTWSSTQRFIAARGSDPLEQI
                     IDQLRAAWGDSQQTRNVTWPLVLRIGIKASDGSPKE"
     gene            complement(886..1398)
                     /locus_tag="VIS53_09185"
     CDS             complement(886..1398)
                     /locus_tag="VIS53_09185"
                     /inference="COORDINATES: protein motif:HMM:NF012436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin"
                     /protein_id="HEY5767995.1"
                     /translation="MLTSQKIIDAINEQIGYEFSASLQYYAIGAHFATEALPQLSQHF
                     FRQAEEEKGHALRFIKYVVDAGGRVAIPAIDAPKSKFKTPLDAVKLSLDQEIHVTQQI
                     NGLVELARKQNDYITINFLQWFLTEQLEEVSSMDNLLKIIERAGNDLLQADEYLARVG
                     LRTMPEPPKQ"
     gene            1590..2582
                     /locus_tag="VIS53_09190"
     CDS             1590..2582
                     /locus_tag="VIS53_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY5767996.1"
                     /translation="MNDEVFKPNSERVGHEGVSRRMFLRATLAGGASLLAGRAATLFA
                     AASASDDSSFSIGGDLPVNRLGFGAMRLTGEGIWGWPPDRENALKVLRRAVELGANLI
                     DTADAYGPETDELLIAEALYPYPKGLVIATKGGNTRPGPNQWVPDGRPEYLKQCVDKS
                     LKRLRLERIDLYQLHRVDPKVPMEDSVGALKEMQSAGKIRHIGLSEVSPEQVARARKI
                     VPIVTVQNRYNITDRKWENTLTYCEQERIGFMPWAPVGGTKGMSSAALEKIAKDHGIT
                     IYQLGLAWLLHRSPVMLPIPGTSSLAHLEENMAARKIKLSPGEWKAIDVLASQT"
BASE COUNT          641 a          766 c          783 g          643 t
ORIGIN      
        1 caacacatca ttccttcggc gatccgtcgc tagccttgat cccaatccgc aggaccagtg
       61 gccaggtaac gtttcgtgtt tgctgggagt caccccatgc ggcgcgaagc tgatcgatta
      121 tttgctccaa cggatcgctg cctctcgcag cgatgaaccg ttgagtcgac gaccacgttt
      181 gaagatagcc gagcagatga tcgagattcc attgcgctgt catttcgaac ttcggcgcat
      241 cgaccttgtg aaacggaaaa ggtagatcgg cgaattgttc aacaagcttg cgttccagcg
      301 gccagaaggg cccgaccact tcgtagtagt atcgattcac cacctcatcg atggccggtt
      361 cgacgtgcaa caagttgtaa gctgacgcag cgaggacgcc gtcggatttt aatactcggc
      421 acgcttccgc gtaaaagcgg tccaaatcga accagtgcaa tgcttgcgcg accatgatca
      481 gatcaatcgt ctctgttccg ataccgctgt tctcagcggg cgccactcga tactcgactc
      541 tcttgtgtga ctgcgcgttc gcgatctgct tctcactcgc atcggtcgca atgacgcgat
      601 cgaacactga tgccaatcca actgctgctt gtccattccc cgtgccgcaa tcccaagcga
      661 cctgacgact cggcgcggtg cttcccagat aatcgaataa tccccgtggg tagccaggcc
      721 gaaatttcgc gtaagccgcg gcctgcgcgg aaaagtgatc cttaaagctc accaaataat
      781 tctagaccgg attaccagga tgatttgggc aagcgcgccg cttgccgatt aacaacgttg
      841 gcagccggag cggccgccct acaaaatggc tgcaacgtca ggttactatt gtttcggcgg
      901 ttcaggcatc gttctcagcc cgacgcgcgc gaggtactca tcggcttgca atagatcatt
      961 tccggcgcgc tcgatgatct ttaacagatt atccatcgac gaaacttcct cgagttgttc
     1021 cgtcaggaac cactgcagga aattaatcgt gatgtagtcg ttttgctttc gtgcgagctc
     1081 gaccagcccg ttgatttgct gggtgacatg aatttcctgg tcgagcgaaa gtttcaccgc
     1141 atctagcggt gtcttaaatt ttgatttcgg cgcatcaatg gccggaatcg ccacgcgccc
     1201 accggcgtcg acgacgtatt tgataaaccg cagcgcgtgg cccttttctt cctctgcctg
     1261 tcggaaaaaa tgctgcgaga gttgcggcaa tgcctccgtg gcgaaatgcg caccaatcgc
     1321 ataatattga agcgaagcgc tgaattcata tccgatttgc tcgttgatcg cgtcaattat
     1381 cttctggctg gttaacataa cgaacacctt accgtggatt acccgctttc gtccagcgac
     1441 tacggcgtgg cgggcacgga tgcaaacgca tcaattctgg ggagcgcacg ccgctggcgt
     1501 gctgcattcg accgctggcc gaatgttccc gtggaggtga tctcaaactt ggttggtgaa
     1561 agattccatg tgaacttacg tttcgtgcta tgaatgacga agttttcaaa ccaaacagcg
     1621 agcgagtggg tcacgagggc gtgagccggc gaatgtttct tcgtgcaacg ctcgcaggcg
     1681 gggcgtcgct tttggcgggc agagcggcca ccctctttgc ggctgcatcc gcaagcgatg
     1741 attccagttt cagcattggt ggcgatctgc cagtcaaccg acttggattt ggcgcgatgc
     1801 ggctgacggg cgaggggatc tggggttggc cgccggatcg cgagaatgcg ctcaaagtac
     1861 tgcgtcgcgc agtcgagctc ggcgcgaact tgatcgacac ggcggatgct tatggacccg
     1921 aaactgatga attgcttatc gcagaagcgc tttatcctta tccgaaagga ctcgtcatcg
     1981 cgacgaaagg cggtaatacc cgacccggtc ctaatcagtg ggtaccagac ggtcgccccg
     2041 aatatctcaa acaatgcgtc gacaaaagtc tgaagcggct gaggcttgag cgcatcgacc
     2101 tttatcaact gcatcgcgtc gatcccaagg tgccgatgga agattcggta ggcgcgctga
     2161 aggaaatgca gagcgccggc aaaattcgcc atatcggatt gtccgaggtc tcacccgaac
     2221 aggtcgcgcg cgcgcgcaag attgtaccga tcgtgaccgt gcagaaccgc tacaacatca
     2281 cggatcgaaa atgggagaac acgctaacgt attgcgagca agaacgcata ggcttcatgc
     2341 catgggcacc agttggagga accaagggaa tgagcagcgc cgctttggaa aaaatcgcga
     2401 aagatcacgg cataaccatt tatcaactag ggcttgcatg gctgctgcat cgatccccag
     2461 ttatgctgcc gattccaggc acgtcgtcgc tcgcgcacct ggaggaaaat atggcggcgc
     2521 gaaaaataaa gcttagccca ggagagtgga aggcaattga cgtactggcg agccaaacgt
     2581 gatttggggc aggaacgtga atcagatgtc gtgcgctcgc gcggactgat cgtgtaatct
     2641 cgttacttga cactccggaa actcacggtg atttcgcgca gccgttgatt ctattttttc
     2701 catcgcgatt tcagcgtcca cgcgaggatt tgttgaaaat gatcgccgtc ggccagcgtc
     2761 gtgtgaagaa acacgaggtt catgccattt tcggttccgc ttatttcatc ttgcagggcc
     2821 ggatgactgg tga
//
LOCUS       DATDAJ010000368         3953 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2046119, whole genome shotgun sequence.
ACCESSION   DATDAJ010000368 DATDAJ010000000
VERSION     DATDAJ010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3953)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3953)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3953
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2046119"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1535)
                     /locus_tag="VIS53_09195"
     CDS             complement(<1..1535)
                     /locus_tag="VIS53_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5767997.1"
                     /translation="MRFKNRIFFIILVIVIVALAAVLLAPIAVSNGVRLWVWWFARQE
                     GFAATLDGVDAPFLRPIAIRQLHLKSVRDDAARVDVTVLDARILLNLKHVFLHLGGRD
                     IRNISVRELHAELHRTNPNAQALSERGWATLHRLLPENLSIAKLETRVETGPSLILLR
                     NASLSASETEPGRFTAAELMITSPWVRQTFSQLRGATHWEGNRLTLAGLTLTHGLDLQ
                     SATVDLARLGNRRIGLQFDVDAFGGKLRANISHEWHSPHSNWKIAGGAADLSLAQISD
                     ALGFADRIDGLLHASNFTFRGNLTEPDRATASLWGELTGLTWRDRTAEALMLGAALYN
                     RKIELQQVYIRQKSNQFTLNGEAAFPATSAEWLRPDFRGNISASINQLGEFLALFGAN
                     PADFAGKISIQGSMDTHARNFGGSLAIEGASLTFFKHDIDSFRANVTLKPSELEIERF
                     DLTRKKDSLSGEGKIDLSPEHKYSGTVDAWTNDLRDYVSTLRGSPRQKGGAIPVEFQA
                     TIDS"
     gene            complement(1633..2313)
                     /locus_tag="VIS53_09200"
     CDS             complement(1633..2313)
                     /locus_tag="VIS53_09200"
                     /inference="COORDINATES: protein motif:HMM:NF025380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4230 domain-containing protein"
                     /protein_id="HEY5767998.1"
                     /translation="MSKSGIPHRVAWPIALTLLALIIATTIVVIFLRLESWPARTALQ
                     STAELERLGKNLRAAFVDIAHLEPRITINDRVYMEQTTPVSELVVLSRRIEVEHELVH
                     TWAGSSKRVKLHGTFIAKAGFDLRKGLSIDIRPDRIMVQLSPAQILGIEQQQVDVLAF
                     ENGLWNRISGQDVQSELSVLPELAWKKAAESELSAEAEKTLQEQLEQRIHTPHPLRLV
                     FKDEKKSE"
     gene            2661..3227
                     /locus_tag="VIS53_09205"
     CDS             2661..3227
                     /locus_tag="VIS53_09205"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY5767999.1"
                     /translation="MRDLGDEGVSRNFAGSLLVAHPNMVDPNFRRTVLFVSEHEPNEG
                     ALGVIINRPLDRPVAELVSGAPPAGLADIPVFLGGPVGKNQLMFAAFEWQKGAGLKLN
                     HNIALEEGGDAQGHKNLLTVCAFVGYAGWGAGQLESEVKQKAWVVQNANPSLLKLDRL
                     PKLWFDIMRALGPWYKMLAAAPDDPSLN"
     gene            3304..>3953
                     /locus_tag="VIS53_09210"
     CDS             3304..>3953
                     /locus_tag="VIS53_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEY5768000.1"
                     /translation="MIIGVPKEIKEQEQRVALLPSATTQLTKHGHSVLVETNAGLGSG
                     YPDEDYVKAGAEIVEQAKEVFARADMIVKVKEPLKAEFPLLRRGQILFTYLHLAASKS
                     LTEALLKSGVTGVAYETIQVDHRLPLLEPMSEIAGRMSVVMGANFLAKYNGGSGVLLG
                     GVPGVLPGRVVVLGGGTSGVNALRMAKGLGADATILDIDVERLRFLDIAIENLHTL"
BASE COUNT          875 a         1049 c         1141 g          888 t
ORIGIN      
        1 gaatcgatgg ttgcttgaaa ttctaccgga atcgcgccgc ctttttgtcg tggtgacccg
       61 cgcaaggtcg aaacgtaatc gcgcagatcg ttcgtccagg catcgactgt ccctgaatac
      121 ttatgctccg gcgaaagatc gatcttgcct tcacccgaca gagaatcctt cttccgggtt
      181 aaatcgaagc gttcgatctc cagttcgctc ggtttcaaag ttacgtttgc tctgaagctg
      241 tcgatgtcgt gtttgaaaaa cgttaacgag gcgccttcga tcgccaggct gccgccgaag
      301 ttgcgggcat gggtatccat cgacccttgg atgctgattt tgcctgcgaa atcagctggg
      361 tttgcaccga aaagagcaag gaattcaccg agttgattaa tcgacgcgga aatgtttccg
      421 cgaaaatccg gcctgagcca ctcggccgaa gtcgcgggga atgcagcttc gccgtttaag
      481 gtgaactgat tgcttttttg cctgatgtaa acttgctgga gctcaatctt ccggttgtaa
      541 agcgcggcgc ccagcatgag cgcttccgct gtgcgatcgc gccaggtgag cccggttagt
      601 tcaccccaca gcgacgcggt tgcgcggtcc ggctcggtaa ggttgccgcg aaacgtgaag
      661 ttgctggcat ggagcaagcc atcgatacgg tcggcgaaac caagcgcatc tgaaatctgc
      721 gccagcgaaa ggtcggcggc gccacccgca atcttccagt tagaatgtgg cgagtgccat
      781 tcgtgcgaaa tattcgcccg aagtttgccg ccgaacgcat cgacgtcgaa ctgcaacccg
      841 attcgccggt tgcccagccg ggcgaggtcc accgtcgcgg actgcaagtc gagcccgtga
      901 gtcaaggtca ggccggcgag cgtcaagcga ttgccttccc aatgagttgc gccgcgcaac
      961 tgcgaaaagg tttggcgcac ccatggggac gtgatcatga gctcagcagc ggtgaaccgg
     1021 ccgggttccg tctcgcttgc agacagcgaa gcgttccgca gcaaaatcaa actcggcccg
     1081 gtctccaccc gcgtttctag cttggcgata cttaagtttt ccgggagcaa gcgatgaagc
     1141 gttgcccagc cgcgttcgct tagtgcttgc gcatttggat tggtgcggtg cagctcggcg
     1201 tggagttctc gaacggagat gtttcggatg tcgcggccgc ccaggtgcag aaagacatgc
     1261 tttagattca aaagaattcg cgcgtctagc acagtgacat caacgcgggc cgcatcgtca
     1321 cggacgcttt tcaagtgaag ctgacgaatg gcaatgggac gcagaaaggg tgcgtcgact
     1381 ccgtcgaggg tagccgcgaa accctcctgg cgggcgaacc accagaccca gaggcgaacc
     1441 ccgttggaga ccgcaattgg cgcaagcagg acagcggcga gcgccacgat gacgatcacc
     1501 agaataatga agaagattcg attcttaaac cgcatcgctg tgagacaaag aggtgatcac
     1561 tgaaagaaaa agcgataatc ggtgatcaca cctgcgtgtg tcacttagat actgatcgca
     1621 gttgacttac cactattcac ttttcttctc gtctttgaag accaaacgca gcgggtgcgg
     1681 cgtgtgaatc cgttgttcga gttgctcctg caaagttttc tcggcttcag cggacagctc
     1741 gctttctgct gctttcttcc aagccaactc aggcaagact gacaattcgc tttgaacatc
     1801 ctgcccggaa atccggttcc acaacccgtt ttcgaatgcg agcacgtcta cctgttgctg
     1861 ctcaatgccc aagatctgtg caggcgacag ctgcaccatg attctatccg gacgaatatc
     1921 gatcgagagg ccttttctca gatcgaaccc ggctttggca atgaacgtgc catgcagctt
     1981 cacccgcttg gagctgccgg cccacgtatg gaccaattcg tgttcgactt cgatgcggcg
     2041 tgacaggacg acgagctcgc ttaccggcgt cgtctgttcc atgtaaacgc ggtcattgat
     2101 cgtgatccgc ggctccaaat gcgcgatgtc gacgaacgct gcgcgcagat ttttgccgag
     2161 ccgctccagc tcagccgtgc tttgcagcgc tgtgcgcgcc ggccaactct ccaaacgcaa
     2221 gaagattacg acaatcgtcg ttgcaattat cagtgccaaa agcgtcaacg cgattggcca
     2281 cgcgacgcga tgcgggattc cggatttcga cattggacgt tcggcgttaa ggctttgagt
     2341 tcagaacgca atcgagcaag agcagatcac gagcaagaag aaacgggtgg atgtttctgc
     2401 cccaaaaaat taccgccccc cacgcccgat aggcgtgaag ggcggctgtt ccccccagaa
     2461 caatcgtaga aaactttcaa ggctgtaagc gaggtttcgt ccgctggcaa caaaattcta
     2521 aataaaattt tagaaaattt ttcgcgcagt tttgtcgttg cattcccaca gtaaatcagg
     2581 ccacgggaga gtgaaccgga tgtcgaacgc cagcgcgatc aaggggttgc gcaagcgcgc
     2641 gtcgcggtct ctaatttcgc atgcgtgatt tgggcgatga aggggtttcg cgcaattttg
     2701 ccggttcgtt gctggtggct catccgaata tggtcgaccc gaactttcgg cgcaccgtgc
     2761 tttttgtttc cgagcatgag cctaatgaag gggcgttggg cgtgataatc aatcgcccgc
     2821 ttgaccggcc agtggctgaa ctggtgtcgg gtgcgccgcc ggcggggctc gccgatatac
     2881 cggtgttttt gggcggtccg gtcggaaaaa accaactgat gtttgcggcg tttgaatggc
     2941 agaagggcgc aggtctgaaa ctcaatcata acattgcgtt ggaggaggga ggcgatgcac
     3001 agggccataa aaatttgctt acggtgtgcg cttttgtcgg ctacgcaggg tggggtgccg
     3061 ggcaactcga aagcgaggtg aagcagaagg cgtgggttgt gcagaatgcc aatccatcgc
     3121 tcctaaaact tgatcggctg ccaaagctgt ggtttgacat tatgcgagcg ctgggaccgt
     3181 ggtataaaat gctcgccgct gctccagatg atccttcgct caactaatta agaagtgaga
     3241 cctccgaagt gatttagctt gattccggat gtgatttctc actaatcagt ctcacttcgc
     3301 accatgatca tcggtgtacc aaaggagatt aaggaacaag agcagcgcgt tgcgttgctg
     3361 ccatctgcga cgactcaact taccaagcat ggtcactccg ttttggtgga aacgaatgcc
     3421 gggctcggtt ccggctaccc cgacgaggac tacgtcaaag cgggcgcgga aattgtggag
     3481 caggcaaaag aagtttttgc gcgcgctgac atgattgtga aagtcaagga acctctcaaa
     3541 gcagagttcc cgttattgcg caggggccaa attcttttca cctatctgca ccttgctgcg
     3601 agcaaatctc tcactgaggc tttgctgaaa tcaggtgtga ctggcgtggc gtacgagacc
     3661 atccaggtgg accatcgttt gccgctgctg gaaccgatga gcgaaattgc cggtcgcatg
     3721 tcggtggtaa tgggcgccaa ttttctcgcc aagtacaacg gtggcagcgg agttttgctg
     3781 ggcggcgttc cgggagtttt gcccgggcgc gtagtcgtcc taggcggcgg aacttcgggc
     3841 gtgaacgcct tgcgcatggc caaaggcctc ggggccgatg ccacaattct cgacatcgat
     3901 gtcgagcggt tgcgatttct cgatatcgca atcgaaaacc tgcacacact tta
//
LOCUS       DATDAJ010000369         3024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2053886, whole genome shotgun sequence.
ACCESSION   DATDAJ010000369 DATDAJ010000000
VERSION     DATDAJ010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3024
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2053886"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(238..2715)
                     /locus_tag="VIS53_09215"
     CDS             complement(238..2715)
                     /locus_tag="VIS53_09215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016291130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEY5768001.1"
                     /translation="MNNFTPRAQQVLALARKEADRFNHNYVGTEHLLLGLIKLGQGVA
                     VNVLQKMGLDLETVRMEVEKQVGSGPETKMVGNVPYTPRVKKVLALAGKEAKALNHSY
                     VGTEHILLGLLREGEGVAARVLKTLELDIERTRNEILKELDPNFTPSESEQEGEPAKK
                     DVKTPALRAFGRDLTELARKGELDPVIGRRNEIERVIQVLCRRTKNNPVLIGEAGVGK
                     TAIAEGLAQEISNGNVPELLRDKRVITLDLALMVAGTKYRGQFEERIKAVMDEIRRSK
                     NVILFIDELHTIVGAGSAEGAMDASNIIKPALSRGELQCVGATTMNEYRKYIEKDAAL
                     ERRFQTIKVDAPTVDEAIQILKGLRPKYEAHHKAKLTDEALETAVRFSDRYITGRFLP
                     DKAIDVMDEAGARARINSMTRPPDVKDIEKEIEAIRIEKEGAIKAQDFEKAASLRDKE
                     KQTKEKLDAILTKWREEREEKEVVVTGDDMMHIISKVTGVPLQRMEEQETQKLLRMEA
                     ELKERVIGQEEAVIAISKALRRSRADLKDPKRPIGSFVFLGPTGVGKTYLARTLAEFM
                     FGDADALIQIDMSEYMEKFTASRLIGSPPGYVGYEEGGQLSEAVRRRPYSVVLFDEIE
                     KAHPDVMHLLLQILEDGKITDSLGRKIDFRNTIIIMTSNVGAELLKKQTVMGFGAPSE
                     GHDYDSMRDKILDETKRVFKPEFLNRLDEIIVFHSLGKPELLRIVDLEVDKVLRRIKA
                     KEVHIDLQQSAKEFLIDKGYDPQYGARPMRRAVERFLEDPLAEELLRGNVKPGDRVDV
                     VAADGKLSFQVPESQAQSSAPAAPAPS"
     gene            complement(2708..>3024)
                     /locus_tag="VIS53_09220"
     CDS             complement(2708..>3024)
                     /locus_tag="VIS53_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP--guanido phosphotransferase"
                     /protein_id="HEY5768002.1"
                     /translation="AYGVLTYAHAMPSKEALNLLSVIKLGMDLGAFPEHHRLQIDELF
                     IETQPAHLQKNSQQKLNAEERDYLRAQIIRDRLKVFPKPDISKMVKDSGNGLTDGPST
                     NE"
BASE COUNT          579 a          838 c          797 g          810 t
ORIGIN      
        1 gaaactgtgg gcttagcttc cggcgggcga aataaggcac ttcgggcgtg ggggcttgtg
       61 gcaggattcg tgcgattgtt ttacctcgct cggtaacatg aatttcgccg attttggcgg
      121 ccttccgaag ccattcgcca gtattgtggt gaagttcgcg aatagttatc gtcttcatgt
      181 gacacagcgt gtcacattga cttggaactg tcaattccag cgcgttcgcg ccgtgcgtta
      241 gctcggcgca ggcgctgccg gtgcgctgct ttgtgcctgt gattccggaa cttggaaaga
      301 cagcttgccg tcggcggcaa cgacatcgac gcggtcgccg ggtttgacgt tgccgcggag
      361 caattcttcc gcgagcggat cttcaaggaa acgttcgaca gcgcgacgca ttggcctggc
      421 gccatattgc ggatcgtacc ctttgtcgat gagaaattcc ttcgcgcttt gctgcaggtc
      481 gatgtgcact tccttggctt tgatgcgcct gagcactttg tccacttcca agtcaacgat
      541 gcgcaacaac tccggcttgc cgagcgaatg aaacacaatg atctcgtcca gccggttgag
      601 gaattcgggt ttaaagacgc gtttcgtttc atcgagaatc ttgtcgcgca tcgaatcgta
      661 atcgtgtccc tcgctcggtg cgccgaatcc catcaccgtt tgcttcttca gcaattctgc
      721 gccgacgttc gacgtcatga tgataatggt gttacggaaa tcgatctttc ggcctaacga
      781 atcggtgatc tttccgtctt ccaaaatctg caaaagaaga tgcatcacat cggggtgcgc
      841 tttttcaatc tcatcgaaaa gcacgaccga atacggccgg cgccgcacgg cctcggaaag
      901 ttgtccgcct tcctcgtaac cgacatagcc cggcggcgat ccgatcaaac gggaggccgt
      961 gaatttctcc atgtactccg acatgtcgat ttggatcaac gcgtcagcat cgccaaacat
     1021 gaactctgcg agcgtgcgcg ctaggtaggt tttgccaacg ccggtcgggc caaggaacac
     1081 aaacgaaccg atcgggcgct tgggatcttt caaatccgcg cgggagcgcc gtaacgcctt
     1141 gctgatcgct atgacggctt cctcctggcc gatgacgcgc tctttgagtt ccgcctccat
     1201 cctgagcagt ttctgggttt cctgttcttc catccgctgg agcgggacgc ccgtgacttt
     1261 cgagatgatg tgcatcatgt cgtcgcctgt cacgacgacc tccttctctt cgcgttcttc
     1321 gcgccacttg gtcaaaatgg catcgagttt ttccttggtt tgcttctcct tgtcgcgaag
     1381 cgaagcggct ttttcaaaat cctgggcctt gatcgctcct tctttttcta tacggatggc
     1441 ttcgatttcc ttctcgatat ccttcacgtc cggcggccgc gtcattgagt tgatgcgagc
     1501 gcgcgcacct gcctcgtcca tgacatcgat ggctttatcg ggaagaaagc ggccggtgat
     1561 gtaacgatcg gaaaatctaa ctgcagtctc gagtgcttcg tcggtgagtt tggctttgtg
     1621 atgagcctcg tacttcgggc gcagaccctt caaaatttga atggcttcat caacagtcgg
     1681 cgcatcgacc tttatcgtct gaaatcggcg ttccagcgca gcatctttct cgatgtattt
     1741 gcgatattcg ttcatcgtcg tcgcgccaac gcattgcaat tcgccacggc tcaaggccgg
     1801 tttgatgatg ttggacgcgt ccatcgcgcc ttcggctgaa cctgcgccga cgatcgtgtg
     1861 tagctcatcg ataaaaagga tcacgttctt ggagcgacgg atttcgtcca ttaccgcttt
     1921 gattcgttct tcgaactgac cgcgatattt tgttcctgcg accattaacg ccagatcaag
     1981 cgtgatcaca cgcttgtccc ttaataattc cggcacgttg ccgtttgaaa tttcctgtgc
     2041 cagtccttcc gcgattgctg ttttgcctac gcccgcttcg ccgatcaaca ccggattatt
     2101 tttcgtgcgc cggcaaagga cttgaatgac gcgctcgatt tcgttgcgcc ggccaatcac
     2161 cggatcgagt tcgcctttac gcgctaactc ggttagatcg cggccaaatg cacggagcgc
     2221 tggagtcttg acgtctttct ttgctggctc gccttcctgt tctgattcgg acggcgtgaa
     2281 attcggatcg agctctttca ggatttcgtt gcgcgtacgt tcgatgtcga gttccagagt
     2341 ctttaagact ctggcagcga ccccctcgcc ttcgcgcaac agcccgagta aaatgtgttc
     2401 cgtgccgaca taagaatgat tgagcgcctt ggcctctttg ccagcaaggg ccagcacttt
     2461 tttgacgcga ggcgtgtacg gaacattgcc aaccatcttt gtctcaggtc cggacccgac
     2521 ttgtttctcc acttccatcc gcaccgtctc gagatcgagc cccatctttt gcaggacgtt
     2581 tactgccacg ccctggccga gcttaatcag tccaagaagc aaatgctcgg tgcccacgta
     2641 gttgtggtta aagcggtcgg cttccttgcg ggcaagcgcc aaaacctgtt gagcgcgcgg
     2701 tgtgaaatta ttcattagtt gatggtccgt ccgtcaagcc attgcctgag tcttttacca
     2761 tcttactaat atcaggtttg gggaaaactt tcaaacggtc acggattatc tgggcccgca
     2821 gatagtcgcg ctcttcagca tttaactttt gttgcgagtt cttttgcaga tgcgccggct
     2881 gcgtttcgat gaacaattcg tcgatttgga ggcggtgatg ttccgggaat gcgccgaggt
     2941 ccattccaag cttgataacc gacagcagat tgagcgcttc cttcgatggc atggcatgcg
     3001 cgtaagttag aacgccatag gcac
//
LOCUS       DATDAJ010000370         2712 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2064880, whole genome shotgun sequence.
ACCESSION   DATDAJ010000370 DATDAJ010000000
VERSION     DATDAJ010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2064880"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..633)
                     /locus_tag="VIS53_09225"
     CDS             complement(139..633)
                     /locus_tag="VIS53_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768003.1"
                     /translation="MRGQVAAIHRIAFMFLRFRWAIQGNRPYLISIVAITCFCLTSCA
                     SVSHHQFSEPAAGWQTKTGQLMYRAAKATLIGEAIVRLSKTGDFELTVSKGPGITLLS
                     LRQDAEFAKFSASFTGQRWSGLIANAPPQLRGWLALRDQFIRTPNQKTLRYVSGSDTF
                     LFRF"
     gene            complement(630..1934)
                     /locus_tag="VIS53_09230"
     CDS             complement(630..1934)
                     /locus_tag="VIS53_09230"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY5768004.1"
                     /translation="MSNSMYDVAIIGGGPAGSTAAALLARAGRRVVLFEREKFPRFHI
                     GESLLPFSMKAFTRLGLQEKFLSAGFIKKYGGEIMGACSDTGTKFYFKDGYRSQTDHA
                     YQVTRGDFDKVLLDHAAESGAEVHEETPVEAVEFSNHGVDLSVRSNGSGNSIQARYLV
                     DASGRTSVLGRQFKIKKTYDHLQKLSIFAHYDGVWRPEGIDGTLTVLIRAIDRWFWLI
                     PLTDQRTSVGVVLDSDTFRKSKLSADDFLEQALAEQPTIAKRMTNSQRVSKVYVEADF
                     SYRSAHLYGDRWLLTGDAAGFIDPIFSSGVFLAVFSGEKCADALNEVLDHPRKARRLF
                     ARYERSVNRAMDVYLRFVNAWYTKEFIEVFLAPRNVLGLAPAVNAVLGGNVGNSFPIR
                     WRMWVFYFLVWLQRHHPIAPKLTLAPKKDETPASVEPVRMGP"
     gene            2210..>2712
                     /locus_tag="VIS53_09235"
     CDS             2210..>2712
                     /locus_tag="VIS53_09235"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY5768005.1"
                     /translation="MKLIDRFVSRELLVNVAFAIAILSLVLVVGNIFRKLLPLLVNHD
                     VPMEYLITFIAYVLPFSLIFTIPWGLLTAILLVYGRLSADNELIALRANGVSVTRVSV
                     PLAGIALGCTAICLWLNVQVAPAAQERLRSTIFDLATRNPMALFGSDQVIDQFPGRRI
                     YVGKKEG"
BASE COUNT          581 a          756 c          753 g          622 t
ORIGIN      
        1 gcaactgcga gatgctattt cttaggcgtt cgccgcggcg aacgctctac aattatcggt
       61 tgggttatga cttcgggcat ctctgtgaga cgctgtccga gttctgtagc gtccgctgtc
      121 ctcagctgaa aaccgggctc agaagcggaa cagaaaagtg tcgctgccgc tgacgtatcg
      181 cagagtcttt tgattcggcg tgcgaatgaa ttgatcgcgt aacgcgagcc acccgcgtag
      241 ttgtggcggc gcgttcgcta tgagaccaga ccaacgctga cccgtgaagc ttgcgctgaa
      301 tttcgcaaac tccgcatctt gtcggaggga caacaatgtg atccctggtc ctttcgacac
      361 cgtcagttca aaatcgcccg tcttcgacaa gcgaactatt gcctcgccga tcagcgtcgc
      421 cttggctgcc cgatacatga gttggccagt tttggtctgc catcccgcag ccggctcgga
      481 gaattgatgg tgtgagacgg atgcgcaact tgttaggcaa aaacaagtga tcgcgacgat
      541 ggaaatgagg taggggcgat tgccctgaat cgcccaacgg aaacgtagaa acatgaaggc
      601 gattcggtga atcgccgcta cctgtcccct catggcccca tacgtacggg ttccacggac
      661 gcaggcgttt cgtctttctt cggcgcgagc gtgagttttg gtgcgatcgg gtggtggcgt
      721 tgcagccaaa ccaggaaata aaacacccac attcgccagc gaatcggaaa actgttgccc
      781 acatttccgc caagcactgc gtttaccgcc ggggcgagac cgagcacatt gcgcggtgcg
      841 aggaaaactt cgatgaattc cttcgtgtac caagcgttga cgaaccgaag ataaacgtcc
      901 atcgcacggt tcaccgatcg ttcgtatcgc gcaaacaatc gtcttgcctt gcgcgggtga
      961 tcgagaactt cgttcagagc atcggcgcat ttttcaccgc tgaacaccgc aagaaaaacg
     1021 ccgctgctaa aaatagggtc gatgaatccg gcggcgtcgc ctgtaagcaa ccagcgatcg
     1081 ccatacaaat gcgcgcttcg ataggagaaa tccgcttcga catacacctt cgagacgcgc
     1141 tgtgagtttg tcatccgttt cgcaatggtt ggctgttccg ccaacgcttg ctcgagaaaa
     1201 tcgtcagcgc tgagcttgga tttccgaaaa gtgtcactgt cgagaaccac tccgacgctc
     1261 gttcgctgat cggtaagtgg aatcagccag aaccagcgat caatggcacg aatcaaaact
     1321 gtcagagtgc cgtcaattcc ttccggacgc cacacaccat cgtaatgcgc gaagatcgac
     1381 agcttttgaa gatgatcgta ggtcttcttg atcttgaatt gccttccgag caccgaggtc
     1441 cgtccgctgg catcgacaag gtaacgcgcc tggatcgaat tacccgagcc gttggatcgc
     1501 accgacagat cgacgccgtg gtttgagaac tcgactgctt caaccggggt ctcctcgtgc
     1561 acttccgcgc cggactcggc cgcatgatcc agcagcacct tgtcgaaatc accgcgtgtc
     1621 acctgataag cgtgatcggt ttgcgaacga tagccgtcct tgaagtaaaa cttggttcca
     1681 gtgtcggagc acgcgcccat gatttcgccg ccgtattttt ttatgaaccc ggcgctcaaa
     1741 aacttttcct gcagcccgag ccgggtaaat gccttcatgc tgaacggcaa cagggactcg
     1801 ccgatgtgaa accgcggaaa cttttcgcgc tcgaagagaa ccacgcgacg tccggcgcgc
     1861 gcgagcagcg ccgcggccgt gctgccggcc ggtccgcctc ctatgatcgc gacgtcgtac
     1921 atgctgttgc tcacggccta tgacggtagc gttacgctga gcgcgttcaa ggagtgacgg
     1981 ctttccagcc ctcaggtaaa aatcaacggc tgcccaagcc gtcgttcgtt ggaacaccga
     2041 cgcatgaggc caggctttca atcatctctg gtcatttgca gtgctccatc caaaggcaaa
     2101 tctgagattc ttcgctttgc tcagaatgac aagaggccta tctgcgccgc cctgaagtat
     2161 ggcgcggcgc agcctcatgt gagatttatg ctaacgtttg cgacgcaaga tgaagttgat
     2221 cgatcggttt gttagccgcg agctgttggt gaacgtcgca tttgcgatcg cgattctgag
     2281 cctggtgctc gtggtcggaa atattttcag gaagctgctg ccgctgctgg tgaatcacga
     2341 tgtaccgatg gaatacctga tcacgttcat cgcttacgtg ctgccgttct cgcttatctt
     2401 caccatcccc tggggattgt tgaccgcgat cctgctagtg tacggacggc tctccgcgga
     2461 caacgaattg atcgcgttgc gcgctaacgg cgtgagcgtc acgcgtgtgt ctgttccgct
     2521 tgctggcatc gcgcttggtt gcacggcgat ttgtctctgg ctcaatgtgc aagttgcgcc
     2581 ggccgcgcag gagagattgc gcagtaccat ttttgatctc gccacgcgca atcccatggc
     2641 gctttttggc agtgatcagg tgatcgatca gtttcccggc cgcaggattt atgttggcaa
     2701 aaaggaaggg aa
//
LOCUS       DATDAJ010000371         2201 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2077154, whole genome shotgun sequence.
ACCESSION   DATDAJ010000371 DATDAJ010000000
VERSION     DATDAJ010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2077154"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..784
                     /gene="ubiE"
                     /locus_tag="VIS53_09240"
     CDS             104..784
                     /gene="ubiE"
                     /locus_tag="VIS53_09240"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: protein motif:HMM:NF001244.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEY5768006.1"
                     /translation="MSTKPAYVREMFGAIATRYDLANHLLSCGIDFYWRAHAAGIVEG
                     WHPHTIADLATGTGDLALAIQKKLPHAELTGVDFLPEMLELARRKGVRRVVLADAMKL
                     PFDDASFDCVTIAFGLRNLENCSAALTEMWRVLNATGHLLVLEFSLPTTAILRAAYRF
                     YLHRCLPLLGSFLTQKKSAYDYLGDSIEEFPSGNAMCELMRETGYVSPSFERLTGGIV
                     TIYTAAKS"
     gene            854..1534
                     /locus_tag="VIS53_09245"
     CDS             854..1534
                     /locus_tag="VIS53_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY5768007.1"
                     /translation="MIDYIQKGGLLMWPILACSIISIAVFGERLFYFHRATIHVGEFL
                     KGLSNLIRRRNFAEALHESAGTPGPVARVIHAAIIRHDAPRRELRDIVQEAAQLEVPK
                     LERFLPVLATIAFLTPLLGLLGTVAGMIDAFGTIASSGGYATVTELSGGVYKSLLTTA
                     AGLVVATPTFVAYSYLSSRVNTVMHDMERAGIEIVHMLTESRPISGIISFQQPDETVR
                     EGEARQDL"
     gene            1594..1998
                     /locus_tag="VIS53_09250"
     CDS             1594..1998
                     /locus_tag="VIS53_09250"
                     /inference="COORDINATES: protein motif:HMM:NF014525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY5768008.1"
                     /translation="MKLSRTTNCNFEWLLLIGLIDLAFLLAFFLLLSSNFILQQGISI
                     SMPFSRFSLGPQSNQQIISITGGAVPAIYFQDQRVTMEQLGPLLDAAKRKDQSIIIKA
                     DRSASYETVAEVTNVALERGITSVALAATPPR"
BASE COUNT          459 a          602 c          591 g          549 t
ORIGIN      
        1 gagttcccgg ccttgtttct caacgttagc ttgttagcta tgccatgact cacaggacgg
       61 cgcgccttaa caatgtccat gacgtttcaa tgagacttcc gacatgagta ctaaacctgc
      121 gtacgtccgc gaaatgttcg gggcgattgc gacgcgctac gatctcgcaa accacttgct
      181 tagctgcggc atcgatttct actggcgtgc gcacgcggct gggatcgtcg agggctggca
      241 cccccatacg atcgctgatc ttgcaaccgg cacgggagat ctagcgctgg caatacaaaa
      301 gaaattgccc catgcggaac tgaccggtgt cgatttcctg ccggaaatgc tggagcttgc
      361 gcggcgcaaa ggtgtgcggc gggttgtgct tgctgatgcg atgaaactcc cgtttgacga
      421 tgcgtcattc gactgtgtca ctatcgcctt cggcctgcgc aacctggaaa actgctcagc
      481 cgcactcact gaaatgtggc gcgtgcttaa cgccacgggt catttgctcg tgttagagtt
      541 ctcattgccg acaacggcga tcctgcgcgc cgcgtatcgc ttttatttgc atcgctgtct
      601 gccattgctt ggctcgtttc taacacaaaa gaaaagcgcc tatgactatc tcggcgattc
      661 aatcgaggag tttccgagtg gtaacgcaat gtgcgaattg atgcgggaaa ccggttacgt
      721 ttctccaagc tttgaacggt taaccggagg gatcgtcaca atttataccg ctgcaaaatc
      781 gtaggcacag tgtgacaagc caaacacgga aagtcccttg ccacagcgcg caaagagagg
      841 tacaaaactc ggcgtgattg attacatcca aaaaggcgga ttattaatgt ggccaattct
      901 ggcctgcagc attatctcga ttgctgtctt tggggagcgc cttttttatt ttcatcgcgc
      961 gaccatccat gtaggcgagt tcttgaaagg actgtcgaac ctgattcgcc gtcgcaattt
     1021 cgctgaggct ttgcacgagt ccgccggtac gccaggcccg gtggcgcgag tgattcatgc
     1081 tgcgattatc cggcacgatg cgcctcgaag ggaattacgc gacatcgtgc aggaagccgc
     1141 gcaactcgaa gtcccaaagt tggagcgatt tcttcccgtg cttgctacca ttgctttcct
     1201 gacgccgttg cttgggctgc ttggcaccgt cgcggggatg atcgacgctt tcggaacgat
     1261 cgcttcgagc ggtggttatg cgaccgtgac ggagctttcc ggtggtgttt acaagagctt
     1321 gctgacgact gcggctgggc tcgtcgtagc aaccccgaca tttgtcgcct acagttatct
     1381 ttcatctcgc gtaaataccg tgatgcatga catggaacgc gcaggcattg agattgtcca
     1441 catgttgacc gaaagccgcc caattagcgg catcatcagt ttccaacaac ctgatgagac
     1501 ggtgcgcgaa ggtgaagcac ggcaggacct ttgacggcca acggccttat ttggttgggt
     1561 cgttgaagct ggaaaacgtc aaggcattta actgtgaaac tcagtcgaac aacaaactgt
     1621 aacttcgagt ggcttttgct gatcgggttg atcgatctcg ctttcctcct cgcatttttt
     1681 ctcttgctga gttcgaattt tatcctgcaa caaggcatct caatctcgat gccgttctcg
     1741 cgtttttcgc tcggtccgca gagcaatcaa caaatcatca gtattacggg cggggcagtt
     1801 ccggcgattt attttcagga ccagcgggtc accatggagc agcttggccc attgctcgat
     1861 gcagccaagc gcaaggacca gtctatcatt atcaaggctg atcgttctgc ttcgtatgaa
     1921 acagtcgctg aagtgacgaa cgttgcgctc gaacgcggca tcacgtcggt tgcgctcgcc
     1981 gcgactccgc cacgatgaag agcgtcgcgt ctgacattgc agccgaacca cttctattca
     2041 gctgggattc ccctcgaggg cgaaggacga tgctcgcggc tttcctgctg ctctcgctga
     2101 tggcccatgc cctgtgcttt tacgtcttcc aaattgttta cccgactccg gtagcgcttc
     2161 tgccgccgcc gggccgcgtt actcttataa cgcccgactc c
//
LOCUS       DATDAJ010000372        10750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2083258, whole genome shotgun sequence.
ACCESSION   DATDAJ010000372 DATDAJ010000000
VERSION     DATDAJ010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10750
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083258"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VIS53_09255"
     CDS             <1..495
                     /locus_tag="VIS53_09255"
                     /inference="COORDINATES: protein motif:HMM:NF024983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY5768009.1"
                     /translation="TNEELETAKEELQSTNEELTTLNEELSNRNLEMMQLTNELNNLL
                     ASTQMPIVMVDNALTVRRATPAARGAFNILPTDIGRPLSELRPNIDVPDMDKILHEVI
                     ETLGTRERRVTDKQGRQYSLRVRPYRTTDNKIDGAVITLVDINGEKEAYADKTNRKDG
                     SSRK"
     gene            551..3646
                     /locus_tag="VIS53_09260"
     CDS             551..3646
                     /locus_tag="VIS53_09260"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY5768010.1"
                     /translation="MPSREFNHASQSKSTAFLRAPRINKNGAPIRSMRTPATRNPKTE
                     LEAATQRFVDLYDFAPIAYVSFDRAGRIEEANLAATELLGVPRDLLIGRPFAFYVADL
                     DSFLHHLLYCRTTQEQVATELELKRRKGQRLPVQLLSTPITSTTRNGALLYQTAIIDL
                     SQRKHHEQQLAEQARLLDLSNDAIIVRDIDDRITYWNKGATKIYGYTLPEALGNVSHD
                     LLKTEHPEPLSRIYQKLLRDSHWQGEVVHTRRDGRRITVFSRWALDRDAQGNRASVLE
                     TNNDITEHKKAQEKIAEAAQQQAALYQLAQRSQTARSLRDVYAAALEGITSALHTDRA
                     SILLFDNKQAMRFVAWQGLSTTYRKVVAGHSPWKPSTKNPKPVCIPDMRLADISKSLK
                     RTMRREDIRAVAFIPLVIEGNLIGKFMIYYRVSHVFTPSELDLAITMARQVAQAIEHQ
                     KDANALRQRERELARELQDQKQLQKISSQMIKQQQIEAVYTQIVEATMALLRSDCGSM
                     QMAVPETGELLLLAQKGFAAGSASGWRRISRNGGTTCAEAFRRGERVIVPDLEQCHFV
                     KKEDLVSYRRSGIRSVQSTPLFSRAGELVGMISNHWRKVHEPSKRELRLLDVLARQAA
                     DLIESKRADEEVRESEARMRATVEQATAGVARCDVDGRVVFGNQKLCDMLGYTESELI
                     GKTFADVTHPDDLDINRRLFQKLIRNGKPFELEKRFIRRDGRILWADVSAGAVRGADG
                     KTQSTVAVVVDVTARKKAEAALRRSKQLLEMRVRARTLELNRANKKLEAEMSRRKGLE
                     GEILAVSDREQQRLGQELHDGLCQHLTAVAFMTRSIALRLKHHRVVDADDIERVAELV
                     NKAAVDTRNLSRALHRVDVDAAALVVALQDLVDREIWRTPCRLEMKPSFQINDDAAAA
                     HLYRIAREAVINANKHAQARQIVVRLERVRKEMALRVIDDGIGFPKDPKPRQGLGYHI
                     MKYRAQLAGGRLEMDSPQTGGTRVSCYLPIHAPGSRKAPNADQMAGAMRKNSNPLVPA
                     I"
     gene            3751..4449
                     /locus_tag="VIS53_09265"
     CDS             3751..4449
                     /locus_tag="VIS53_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY5768011.1"
                     /translation="MSVVRSTNKNPKCEAPEAKRIVIVDDHPLFRKGLQELIHSDDSF
                     AVCGEAGTASEGMEVIRKLHPDLVIVDLSLPGANGIELIKNIRAEYPKLPILVLSMHD
                     ESLYALRAMRAGADGYVMKHEAMANVVQAVHEVFNGRPYLSPAMAAQVITKFAHRQAE
                     GEVDAVERLSDRELEILELIGKGNEVRQIAKLLNLSPKTVETHRAHIKDKLDLKNSRE
                     VARFALQWLQAREA"
     gene            complement(4581..5033)
                     /gene="tnpA"
                     /locus_tag="VIS53_09270"
     CDS             complement(4581..5033)
                     /gene="tnpA"
                     /locus_tag="VIS53_09270"
                     /inference="COORDINATES: protein motif:HMM:NF033573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HEY5768012.1"
                     /translation="MSVHSYSRCWIHLIWGTLSRERVLNKKAAAGLSRYLVEYVTEHD
                     VYMKINFVNPDHVHALIDLPTRFSIEKVVQLLKGSSSHWVNSSELVTGKFAWGRGYGA
                     FSVSHSNLDLVARYIADQEEHHRQRTFADELREFTDRHGLCWRDDESR"
     gene            5269..6171
                     /gene="epsC"
                     /locus_tag="VIS53_09275"
     CDS             5269..6171
                     /gene="epsC"
                     /locus_tag="VIS53_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase EpsC"
                     /protein_id="HEY5768013.1"
                     /translation="MATTTRDAIEELLQTYGETGGINYLAAAASLPSRLSIEAACTEL
                     MSLMFPGFRSEALVSSEDLADTTRIRVRHLHARLKTEICRSLGRIPPDEATETKAEAV
                     LADFFKQLPSVRRMLWTDIDAAYEGDPAATTYEEIILAYPALEAIAIYRMAHLLYGKV
                     PLIPRIMTEWAHSRTGIDIHPGAQIGSHFFIDHGTGVVVGETTQIGSHVKLYQGVSFI
                     ARSLGAGQALRGKKRHPTIEDGVCIYAGTTIMGGDTVIGANSTIGANVFLTKSVPPRS
                     LVYYEEKEVRVVPKRKTRGRNRTR"
     gene            6343..7494
                     /locus_tag="VIS53_09280"
     CDS             6343..7494
                     /locus_tag="VIS53_09280"
                     /inference="COORDINATES: protein motif:HMM:NF002806.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEY5768014.1"
                     /translation="MIYLDYNATTPLCDAAREAMLPYLNRFFGNPSSVHAAGREARAA
                     IDDGRDKIAALLNAKPGEIIFTSGATESCNLGVLGLARSGSSRGGHIISNKAEHHAVL
                     NAVEHLENREDFEVTWLNVSESGMVDLDQLANSIRPDTKLVSIMAANNETGVVQPMRE
                     ISRICRERGVLLHSDIVQAFGKLDIDVSLVDAGSFAAHKFYGPKGTGFLFLRSGLPIQ
                     PLMFGGAHENQRRPGTENVAGVAGMAAAAEWVLRDSDAERQRQAQLRDDFWTRIATLF
                     PDARQNGDQTHRLANTLNTSFIGVDSETMLMALDLEGVCASSGSACMVGSVRASHVLL
                     AMGLPMESARSAIRFSLGRRTTADEIANAADALERIAKRTKDAREYALA"
     gene            7481..8068
                     /locus_tag="VIS53_09285"
     CDS             7481..8068
                     /locus_tag="VIS53_09285"
                     /inference="COORDINATES: protein motif:HMM:NF021759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT-like domain-containing protein"
                     /protein_id="HEY5768015.1"
                     /translation="MPSLRQLEFAFQPVPASLWDASRFAQRSDYKASDLETKARQLLC
                     SLGAKRIATELRVEWNSRLKTAAGRADYRQKLISLNPRLVEHPSEIDRTLRHELAHIL
                     AQFRKKSRRRISPHGPEWQQACRDLGIANEKRCHTLPFPAKRYAPRFIYRCPNCRRDF
                     PRGRKIKRIVACLACCRAYNGGKFDIRFRLKLVTV"
     gene            complement(8112..9185)
                     /gene="prfB"
                     /locus_tag="VIS53_09290"
                     /pseudo
     CDS             complement(8112..9185)
                     /gene="prfB"
                     /locus_tag="VIS53_09290"
                     /inference="COORDINATES: protein motif:HMM:TIGR00020.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
     gene            complement(9431..9793)
                     /locus_tag="VIS53_09295"
     CDS             complement(9431..9793)
                     /locus_tag="VIS53_09295"
                     /inference="COORDINATES: protein motif:HMM:NF016839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEY5768016.1"
                     /translation="MEHGYADFRARREATVWQRLNRILLVLLIIAIWLVIVSLFVPPY
                     KKLMQSRTEIDNLQQQVSEQHNLLARQTREVTLLKTDVSYLETIARDRLDLMKEGETI
                     FRLEPARAKAKPVAPVRK"
     gene            complement(9795..>10750)
                     /gene="eno"
                     /locus_tag="VIS53_09300"
     CDS             complement(9795..>10750)
                     /gene="eno"
                     /locus_tag="VIS53_09300"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY5768017.1"
                     /translation="NATLAVSLATARAAATAENLPLFRYLGGPDARVLPVPMMNIMNG
                     GAHSDAPIDFQEFMVMPRGAPSFSEALRYGTEVYHALKSVLKARHLSTAIGDEGGFAP
                     QLDSAEDALESISAAVEKAGYKLGEQIFIALDPAASEFYDSEKNLYVFKKSGGAEKTA
                     EELVDYYVELCARFPIVSIEDGCAENDWDGWKKLTKKLGSKIQLVGDDLFVTNVKFLQ
                     KGIAEHVANSILIKVNQIGTLTETLATIDVAKKNNYTTVISHRSGETEDTTIADIAVG
                     TNAGQIKTGAPCRSDRVAKYNQLLRIEEELGDKAVYGATLR"
BASE COUNT         2493 a         2988 c         3003 g         2266 t
ORIGIN      
        1 acaaacgaag aactcgagac ggccaaggaa gaattgcaat caaccaatga agagctgacc
       61 acgttgaacg aagaactgag caaccgcaac ctggagatga tgcagttgac gaacgagcta
      121 aacaatcttc tcgccagcac gcaaatgcca atcgtgatgg tggacaacgc gttaacagtg
      181 cggcgcgcta cgccagccgc ccggggggcc tttaatattt taccgactga catcggccgg
      241 ccgttgagcg agctgcggcc taacattgat gttcccgaca tggacaagat cttgcacgag
      301 gtgatcgaaa cgctgggcac gcgcgagcgg agagtgaccg ataagcaagg gcggcagtac
      361 tcgctgcggg tgcggccata tcgcacaacg gataacaaaa tcgacggcgc cgttatcacg
      421 ctggtggata tcaacggaga aaaggaagct tacgcagaca aaacaaaccg aaaagatggc
      481 tcatcgcgca aataataagc aacgcgtaac gcgtgctcgc caaagggtcg ccaccgggaa
      541 cggccgtatt atgccgtcgc gcgaattcaa ccacgccagc caaagcaaga gcaccgcgtt
      601 cctgcgcgca ccgcggatca ataaaaacgg cgcgccgatt cgttccatgc gtacgcccgc
      661 aacgcggaat ccaaagactg aactggaagc cgccacccag cgatttgtcg atctttatga
      721 tttcgcgccg atcgcttatg tcagcttcga tcgcgccggc cgaattgagg aagccaatct
      781 ggccgcaact gagttgctgg gcgtgccaag ggatttgtta atcggacgtc ccttcgcatt
      841 ttatgtagcg gacttggatt cattcctgca tcacctgctc tattgccgca cgacgcagga
      901 acaagttgcg acagaactag agctgaagcg gagaaaaggc cagcggctcc cggttcaact
      961 tctaagtacg ccgatcactt cgaccacgcg aaatggcgct ttgctctacc agaccgccat
     1021 catcgattta tctcagcgca agcatcacga acaacaactg gccgagcaag cgcgactgct
     1081 ggatttgagc aacgatgcga tcatcgttcg cgatatagac gatcgaatta cttactggaa
     1141 caaaggggcg acgaaaatct acggctacac cctgccggaa gcgctcggca atgtgagcca
     1201 cgatctgttg aaaacagaac atcccgagcc gctgtccaga atttatcaaa agctgctccg
     1261 ggatagtcat tggcaagggg aagtcgttca cacgcgacgc gacggcaggc ggattaccgt
     1321 gttctcgcgc tgggcgttgg accgcgatgc gcaaggaaat cgtgcctctg tgttggaaac
     1381 aaacaacgat atcaccgagc acaaaaaagc gcaggaaaag atcgccgaag cggcgcagca
     1441 gcaggcggcc ttatatcagc tggcgcaacg ctcgcagacc gcaaggtccc tgcgtgatgt
     1501 ctacgctgcg gcattggagg gaatcacatc agctttgcac accgaccgcg catccattct
     1561 gcttttcgat aacaagcagg cgatgcgttt tgtggcgtgg caagggctat ccacgacgta
     1621 ccgcaaagtg gtagcaggcc attcgccctg gaaaccgagc accaaaaatc ccaagccggt
     1681 gtgcattccg gacatgcgac tggctgatat ttcaaaatcg ctaaagcgta ccatgcgccg
     1741 cgaagacatt cgcgcagtcg cgttcattcc gctggtcatc gaaggcaatt taattggcaa
     1801 gttcatgatt tattatcgcg tgtcgcatgt cttcacgcct tccgagcttg acttggcaat
     1861 aactatggcg cggcaagtgg cgcaggccat cgagcatcaa aaagacgcga atgcgttacg
     1921 acagagagag agggaacttg cacgcgagct gcaggatcag aaacaactgc aaaaaattag
     1981 cagccagatg atcaagcagc agcagatcga agcggtctat acgcagatcg tcgaggccac
     2041 tatggcgctg ttgcgctcgg actgcggtag tatgcaaatg gctgttccgg aaacaggcga
     2101 actactgttg ctggcgcaaa agggattcgc cgcgggatcg gcaagcggct ggcggcgcat
     2161 ttctcgcaat ggcggcacta cctgcgccga agcgtttcgg aggggcgaac gagtgattgt
     2221 gcccgatctt gaacagtgcc atttcgtaaa aaaagaggac ctggtttcgt atcgaagatc
     2281 gggaatacgt tcagtgcaat cgacgccatt gttctcccgg gcgggcgagc tggtcggcat
     2341 gatatccaac cactggcgaa aggtgcacga gccttccaaa cgcgagctgc gtttgttgga
     2401 cgtgctggcg agacaggccg ctgacctgat cgagtcgaaa cgcgccgatg aggaggtgcg
     2461 agaatccgag gcacgcatgc gcgcaaccgt cgagcaagcc acagcaggcg tggcgcgctg
     2521 tgatgtagac gggcgcgtcg ttttcgggaa ccaaaagctg tgtgatatgc tcggttacac
     2581 agaatcggag ctaatcggca aaacctttgc cgacgtgacg catccggacg atttggacat
     2641 taacaggcgt ttgtttcaga aattgatcag gaatggcaag ccgttcgagc tcgaaaagcg
     2701 gttcatcagg agggacggca gaattctatg ggctgatgtg agcgccggcg ccgtgcgcgg
     2761 ggctgacggc aaaacgcagt ctaccgtcgc cgtggttgtc gatgtcacgg cgcgcaagaa
     2821 agccgaggct gcgttgcgac gatcaaagca attattggaa atgcgtgttc gtgcgcggac
     2881 gcttgagttg aatagagcaa acaaaaagtt ggaagcggaa atgagccggc gcaaagggct
     2941 cgaaggagaa atcctcgctg taagcgatcg cgagcaacaa cggctgggac aggaactgca
     3001 cgacggtctt tgccagcatt tgaccgcggt ggcgttcatg acgcgctcaa tagcgttgcg
     3061 gttaaaacac catcgcgttg tcgacgcaga tgacatcgaa agagtcgcgg aactggttaa
     3121 caaggcagcc gttgacacac gtaacctatc cagggcactg cacagggtgg atgtggacgc
     3181 agccgcgctt gttgtcgctt tgcaagatct tgttgatcgg gaaatttgga gaacgccctg
     3241 ccggctggaa atgaaaccgt cgtttcaaat caacgatgac gcggccgcgg cacatctgta
     3301 ccgaattgcg cgggaagcag tcattaacgc gaataaacac gctcaagcgc ggcaaatcgt
     3361 ggtcagactg gagcgggtcc ggaaggaaat ggctttgcgc gtgatcgatg acggaatcgg
     3421 gtttcccaaa gaccctaagc cacggcaagg tctcggctat cacatcatga aataccgggc
     3481 ccagttggcg ggcggccgct tggaaatgga ttctccacaa acaggaggca cgcgtgtgtc
     3541 ctgctatttg ccgattcatg cgccgggatc gcgtaaagct ccaaacgccg atcagatggc
     3601 tggagcgatg cgaaaaaatt caaacccgtt agtccccgcg atctaacttt gtgacatctg
     3661 gcgcggtagg gagcggcgaa tgcctagaag ggatcaagac tcttgattct cgtcctcgct
     3721 tatgtcgcaa cagagccagc cccgaagccg atgagtgtcg tgcgatccac aaataagaac
     3781 ccaaaatgcg aagcgccgga agcaaaacgg atcgtgatcg ttgatgatca cccgctcttt
     3841 cggaagggac tccaggaatt gattcattcc gatgactcct tcgccgtttg cggtgaagcc
     3901 gggaccgcct ctgaaggcat ggaggtgatc cgcaagctgc atcccgatct ggtaattgtg
     3961 gatctcagtt tgcccggcgc taacggcatc gagttgatca agaacattcg cgccgagtat
     4021 ccgaagctgc ccattctggt gctctcgatg catgatgaat cgctctatgc gttacgcgcg
     4081 atgcgggccg gagccgacgg ctacgtgatg aaacacgaag caatggcaaa tgtggttcag
     4141 gcagtccacg aagtgttcaa cggccgcccc tatctcagcc ccgccatggc cgcgcaggtc
     4201 atcaccaaat tcgcccatcg ccaggccgaa ggcgaagtgg acgccgtcga gagactgagc
     4261 gatcgcgaac tcgaaatcct cgagctgatc ggtaaaggca acgaagtgcg tcagatcgcc
     4321 aagctattga acctcagccc aaagaccgtg gaaacgcacc gggcgcacat caaagacaaa
     4381 ctcgacttga agaactcgcg cgaagttgct cgcttcgccc tgcagtggct gcaggcccgc
     4441 gaggcgtagt ggctgcgatt cggcgtcaat cgaggcaatt tctcgtcacc gaaatcgaga
     4501 cgagcaacag cattgctcac atctcattaa caccggcctt taggccggtg ctaatgcacc
     4561 actgctcgtc gttagccgtt tcaacggctt tcgtcgtcgc gccaacacaa cccgtgacga
     4621 tcagtaaatt ctcgcagttc gtcagcaaac gtgcgttggc gatgatgttc ttcctgatcg
     4681 gcgatgtatc gcgctaccaa gtccagattg gaatgcgaca cggagaacgc tccataacct
     4741 ctgccccagg cgaattttcc cgtaaccagc tcgcttgaat tcacccagtg agaagaactt
     4801 ccctttaaga gttgcaccac cttctcgatc gaaaaccgag tcggaagatc gatcagcgcg
     4861 tgtacatgat cagggttcac gaaattgatt ttcatgtaca cgtcgtgctc ggtgacgtat
     4921 tcgacaagat atcgcgatag tcctgccgca gcctttttgt ttaggactcg ctcgcgactc
     4981 agtgttcccc agatcaagtg aatccagcag cgagaatagg agtgcacaga catgcgacgg
     5041 atggtaagcc gttaaaacgg ctgatgtcga tccctcgctc gacacaccgg cttgaaagcc
     5101 ggtgttaatg agaggatgtg cagcgccgat gaaggcgcag gtcttctcat taacaccggg
     5161 ctttagcccg gtgttcaagg agccgcaatt ctcaagccgt ttcaacggct ttccccacac
     5221 gccatacttt cacttttttt cacgctcagc gggcgcatag ttcgtttgat ggccaccacg
     5281 acgcgagacg caattgagga actgcttcag acttacggcg agacaggggg aataaattat
     5341 ctcgccgccg ccgcttccct cccctcgcgt ctatccatcg aagcggcttg caccgagctg
     5401 atgagcctga tgtttcccgg ttttcgcagt gaagcgctcg tgagctccga agatctcgcc
     5461 gacaccacgc gcattcgcgt cagacatttg cacgcgcgac tcaaaactga aatttgtaga
     5521 agcctcggca ggattccccc cgatgaagca acggaaacaa aagccgaagc agtattggca
     5581 gactttttca agcagttgcc ttcggtgcgt cgcatgcttt ggacggacat cgatgccgct
     5641 tacgaagggg acccggccgc gacgacttat gaggaaatca tcctcgctta tccggcgctg
     5701 gaggcgatcg ccatttatcg aatggcgcat ctgctgtacg gaaaggtgcc gttgattccg
     5761 cgtatcatga ccgagtgggc gcacagccgc acaggcatcg atattcatcc cggcgcacag
     5821 atcggctcgc acttcttcat cgaccacggc accggcgtag ttgttggcga gacgactcaa
     5881 atcgggtcgc acgtgaaact ttaccagggt gtgtcattca tcgcgcgctc gctcggagcg
     5941 ggacaggcgt tgcgtgggaa aaaacgtcac ccgactatcg aagacggcgt ctgcatttat
     6001 gccgggacca cgatcatggg cggcgacacc gtgattggcg cgaattccac catcggcgcc
     6061 aacgttttcc tgacgaaaag cgtgccaccg cgttcgctcg tctactacga agaaaaagaa
     6121 gttcgtgtcg taccgaaacg aaaaacacga ggccgcaacc gcacgcgatg aatttcagaa
     6181 gtgaaaacgg ccaattctgt agccacttcg ctgtgcgaag cgtgagtgtt gcatgtttgc
     6241 acaacgcatc cagcgcgtct catagaggcg cggctacaac gggcaaacga tcacgatcac
     6301 gagcaagagc aagagcatga gcacgagtaa gaggaagacc tgatgattta tctcgattac
     6361 aacgccacca caccgttatg cgatgcagcg cgcgaggcga tgctgccata tctcaaccgc
     6421 tttttcggca atccatccag tgtccacgct gctggccgcg aagcgcgtgc cgccatcgat
     6481 gatggtcgcg acaagatcgc cgcgctcctg aacgcgaaac ccggcgaaat catttttacc
     6541 agcggcgcaa cggagtcatg caacctcggg gtgctgggcc tggcacggtc tggatcttca
     6601 cgcggcggcc acatcatctc gaacaaagcc gaacatcacg ctgtgctgaa cgcagtggaa
     6661 caccttgaga atcgcgaaga ctttgaagtg acctggctca atgtcagcga aagcggaatg
     6721 gtcgatctcg atcagctcgc caattcaatt cggcctgata ccaaactcgt ctcgatcatg
     6781 gctgcgaata acgaaaccgg cgttgtccag ccgatgcgcg aaatttcgag gatatgccgc
     6841 gagcgtggcg tgttacttca cagcgacata gtccaggcgt tcggcaaact ggatatcgat
     6901 gtttcgttgg tcgatgccgg cagttttgcc gcgcataaat tttacggccc gaagggaacg
     6961 ggatttctat tcttgcgcag cggtttgccg attcagccac tcatgttcgg cggcgcgcac
     7021 gaaaatcagc ggcgccccgg aacagaaaac gtcgctggcg tcgcgggaat ggctgcagct
     7081 gccgagtggg tgttgcgcga ctccgatgcg gagaggcaac ggcaagcgca attgcgtgat
     7141 gatttctgga cacgcatcgc aacgcttttc ccggacgcgc ggcaaaatgg cgaccaaact
     7201 catcggctag ccaacacgct caacacaagt tttatcggag ttgattcgga aacgatgctc
     7261 atggcgctgg atttggaagg cgtttgcgcg tcgagcggtt cggcttgcat ggttggctcg
     7321 gtgagggcgt cgcatgtttt gctcgccatg ggattgccaa tggaaagcgc cagatcagcc
     7381 attcgttttt cgcttggcag acggacgacc gcggacgaaa tcgccaacgc tgccgatgca
     7441 ctcgagcgaa tcgcgaagcg aaccaaagac gcccgcgaat atgccctcgc ttaggcagct
     7501 ggaattcgcg tttcagcctg tacccgcgtc tctgtgggac gcgtcgcgct tcgcccagcg
     7561 aagcgactac aaagccagcg atctagaaac aaaagcgcgc caacttttgt gttcgttagg
     7621 cgcgaagcga atcgcaacag aacttcgcgt cgaatggaat tctcgtctca aaaccgccgc
     7681 aggccgcgct gattatcgcc agaaactgat ttcgctaaac ccgcggctgg ttgagcatcc
     7741 ctcggaaatc gatcgcacgc tgcgtcacga gcttgctcat atcctcgcgc aatttcgaaa
     7801 aaaaagtcgg cgacggattt caccgcacgg acccgagtgg cagcaggctt gtcgcgattt
     7861 gggaatcgcg aacgagaagc gctgtcatac gttgccgttt ccggcgaagc gttatgcgcc
     7921 gcgtttcatc taccgttgcc cgaattgccg gcgcgatttc cctcgcggac gcaagattaa
     7981 acgcatagtc gcctgtctgg cctgttgccg cgcgtataac ggcggcaagt tcgatatacg
     8041 ttttcggttg aagctggtga ccgtgtagcg gcgtatgtgg caaacgccgg gcgctggccg
     8101 cggcaagccc tctacaattc tttatcctcg gccttggtgt ttttttcgcc gcgcaatttc
     8161 gcctgtataa acatgtcgat gtccccatcc atcacggctt gcacgttgct cgtctcggcg
     8221 ccggtgcggt ggtctttcac catttgatat ggctgaaaca cgtacgagcg aatttgattt
     8281 ccccacgcga tctcgccttt ctcgccgtat tgccgctcta tctcggcgcg tttcttgtct
     8341 tcttcgagct gataaagttt tgctttcaac attttcatcg ccagctcgcg gttccgtccc
     8401 tggctccgct cggcctggca ggcgacgacg attccactcg gtttgtgcaa aatccgcacc
     8461 gcagtttcga ccttgttaac gttttgtccg cctttgccgc cgctgcgaaa cgtgccgatc
     8521 tcgagatcgg ccggattaat ttcaatcggc gcagtgtcgg cgatttcggg cacaacgtcg
     8581 acactcgcga atgatgtgtg ccgccgtttg ttcgcatcga acggcgagat gcgcacaagc
     8641 ctgtgcacgc cgcgctcggt ttggaggtag ccgtagccgt gctcgcctgt tacgagcaaa
     8701 gtcaccgatt tgattcccac ctcttcgccc tgctgaatgt cgactgtttg cgatttgaaa
     8761 ccgctgcgct caatccagcg ctggtacatc cgaagcagca tatcggccca gtcgcacgat
     8821 tctgtgccac cggcgccgga atgaatcgtc acaaacgcgt tggcgcgatc gttttctccg
     8881 gacaaaaact ggcgcaactc gaactcgtcg agcgtgtgag cgagacggtc gtgttcggtc
     8941 gctacttctt tttcggcctg cgcgcgatgc gccggatcgc tttcttccgc ggcgagttct
     9001 tgcagcgcgc tgaaatcttc gatttcgcgt tccaattgtt ggaacggatt gatcaaagaa
     9061 cgcaaccgcg aaacttcttc gacatcagcc tgggcgcgct cccgattcga ccagaaatcg
     9121 ggcgcagcca ttcgcgcttc aattgctgct agattttttt gaagctgctc gacgtcaaag
     9181 aaacctccgc aactcgcgca cgcgcgactt cagatcctca gcatcaggaa tggagatttc
     9241 cgttggcatg aagaaaaata attcaactca ccacgaatgg caaagggtag cgcacgcgtc
     9301 tcgcttgctg gtttcggcgt cgcgccgaaa acaatctttt ctctcaatcc tataaaaatg
     9361 agataagtgg caaaacaaag ttcgcgatcg cgtggacgcg ctcgccagca cgcgggccgc
     9421 ctgcgctacc ctacttgcgc acgggagcga cgggcttcgc ctttgcgcgc gcgggttcga
     9481 ggcgaaaaat tgtttcgcct tccttcatca aatcaaggcg atcgcgagcg atcgtttcca
     9541 gatagctcac gtctgtcttg agcagggtga cctcgcgggt ctggcgcgcc agcaaattgt
     9601 gttgctcgct aacctgttgt tggaggttgt cgatctccgt gcggctctgc atcagttttt
     9661 tatacggcgg cacgaacagg ctcacgatga caagccagat ggcgatgatc agcaggacga
     9721 gcagaatgcg gttaagtcgc tgccagacgg tggcttcgcg acgcgcgcgg aaatcagcgt
     9781 aaccgtgctc cacttcagcg gagtgtagcg ccgtacacgg ctttgtcacc aagttcttct
     9841 tcgatccgca acaactgatt gtacttggcc acgcgatcgc tacggcatgg cgcaccggtc
     9901 ttaatttgac cggcgtttgt ccccaccgcg atatcggcaa tggtcgtgtc ctcagtttca
     9961 cccgaccgat ggctgatcac cgtcgtgtaa ttatttttct ttgccacgtc gatcgttgcc
    10021 agcgtctccg tcagcgtgcc gatctgattt accttgataa gaatggaatt cgccacgtgc
    10081 tcggcaattc ctttctgaag aaatttcacg ttcgtaacga aaagatcgtc accgaccagt
    10141 tgaatcttcg agccgagttt tttggttaat tttttccagc cgtcccaatc gttctcggcg
    10201 caaccatcct cgatggaaac gatcggaaat cgcgcgcaaa gctcgacgta ataatcgacc
    10261 aattcttcag cggtcttttc tgcgccaccc gatttcttga aaacgtagag gtttttctcg
    10321 ctgtcgtaga attcggaggc agctggatcg agcgcgataa agatctgttc tcccagcttg
    10381 taacccgcct tctcaacggc cgcggaaatc gactccaatg cgtcttcagc ggaatcaagc
    10441 tgcggcgcaa atccgccttc gtcgccaatg gccgtggaaa gatgccgcgc tttcaaaaca
    10501 gatttgagcg cgtggtagac ttctgtgccg taacgcaatg cttccgagaa actcggtgcg
    10561 ccgcggggca tgaccatgaa ttcctgaaaa tcgatcggcg catcggaatg cgcgccgccg
    10621 ttcataatgt tcatcatcgg cactgggagc actcgcgcgt cgggtccgcc gaggtatcga
    10681 aagagcggta agttttccgc ggttgccgcg gcgcgtgccg tcgcaagaga aacagccagc
    10741 gtcgcattgg
//
LOCUS       DATDAJ010000373         6521 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2083290, whole genome shotgun sequence.
ACCESSION   DATDAJ010000373 DATDAJ010000000
VERSION     DATDAJ010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2083290"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1210
                     /gene="ptsP"
                     /locus_tag="VIS53_09305"
     CDS             <1..1210
                     /gene="ptsP"
                     /locus_tag="VIS53_09305"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEY5768018.1"
                     /translation="GIATDVGSRTSHAAILSRSLNIPAVLGLHDITAKIETGQHVLVD
                     GSDGWVIVNPTPETLEHYKQIESRRAKVTAQLKQLRKTTSITRDGRHIVLSANIELPE
                     DVDAVVANGAEGIGLYRTEFLYLNRETLPSEDEQYETYRKVAERVRPNPLIIRTFDLG
                     GDKLATGAADIGDELNPFLGWRAIRFCLENQDMFKTQLRAILRASTAGNVKVMFPMIS
                     GLEELRRAMAVLEECKQQLRNSKVEMAERVEVGAMVEIPSAAICASALAREVDFLSIG
                     TNDLIQYALAVDRVNEKVAYLYEPTHPAILRLLKMVADAAHANEIWVGVCGEMAGDVA
                     LVPLLLGLGVDELSASATLVPRVKRAVQSLTIPECSELVEQTLKLNTASEILERCLQL
                     ADSRYGDLLG"
     gene            complement(1243..1713)
                     /locus_tag="VIS53_09310"
     CDS             complement(1243..1713)
                     /locus_tag="VIS53_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease family protein"
                     /protein_id="HEY5768019.1"
                     /translation="MNKTVIEVQVRAVLPTSGGCAVFLGNNEKVFIIYVDQTVGSAIT
                     MFMRQITKERPLTHDLMAHLLAALGAKVERVIINDLKNATYYARVIIQVENELQQKKI
                     IELDGRPSDCIAMATQQKAPIYVSQDVWDEVDDMSDVLRKMEEEGLKTDPEGEE"
     gene            1880..3835
                     /gene="speA"
                     /locus_tag="VIS53_09315"
                     /pseudo
     CDS             1880..3835
                     /gene="speA"
                     /locus_tag="VIS53_09315"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
     gene            3971..5365
                     /gene="asnS"
                     /locus_tag="VIS53_09320"
     CDS             3971..5365
                     /gene="asnS"
                     /locus_tag="VIS53_09320"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004244664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEY5768020.1"
                     /translation="MTQLSPTPIKNALQSTVQIDSVRVQGWVRTRRDSKDFSFIELND
                     GSSLRNLQVIAKKDAVPNYAEIQRLNTGASIVVQGALVPSQGKGQKWELIARDIEIVG
                     GADESYPLQKKGHTPEFLREIAHLRPRSNLFGCVFRVRSRLAFAVHQFFQDRGFVYVH
                     TPIITGSDCEGAGELFRVSTIDIKNPPRKNGEIDYAQDFFARQTYLTVSGQLEAEAFA
                     CALTKVYTFGPTFRAENSNTSRHASEFWMIEPEMAFCDLTGNMDLAEELVKYLIADAR
                     KQCAEELELFAKFVDKELLARLDFVIERPFQRITYTEGVELLKKSGEKFEFPVDYGTN
                     LQSEHERWHTEKHFKCPITVFNFPKEIKPFYMRSNDDGITVAAIDLLVPGIGEIVGGS
                     QREERLEMLEDNMRRHHMDPADYKWYLDLRRYGTVPHSGFGLGFERMLMFITGISNIR
                     DVIPFARTPGSAEF"
     gene            complement(5396..5734)
                     /locus_tag="VIS53_09325"
     CDS             complement(5396..5734)
                     /locus_tag="VIS53_09325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768021.1"
                     /translation="MRFGFPRRVRLLLVPASAVLLFVVPGCGNSSIVGKWRMSGAEDQ
                     IVWEFSSNGSVLVGEVRGRYKFGDQERIKIETPFATTVYLMELSSDRLVLQELGDSKL
                     EFTRVREGQP"
     gene            complement(5787..>6521)
                     /locus_tag="VIS53_09330"
     CDS             complement(5787..>6521)
                     /locus_tag="VIS53_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768022.1"
                     /translation="LPAEAALLVPGVALLLWHWRHPAAFLVLASGLGVLFVGGTLVAY
                     PNSVPPLINHWTPAFPAFYVALALPVGAWITAGQSEEPRLRWILPATVGLALLVLGWC
                     NLNFYFRRYYADPESLKSTAYKSAQRNYEVQTAQSRYSASLGRNYEVFTVGQSPWPYD
                     PITMQYLVREQKWTLLTNPATELPSITRDNEGVAFLFFAGNEQYEQTTHELFPGGKHG
                     EVTSRHGKHLFYTYVLPPPEEQTTGK"
BASE COUNT         1560 a         1702 c         1817 g         1442 t
ORIGIN      
        1 cgggattgcc accgacgtcg gcagccgcac ttcgcacgcc gcgattctgt cgcgatctct
       61 caatattccg gcggtactag gtctccacga tatcactgca aagatcgaaa ccggtcagca
      121 cgttctggtc gatgggagcg atggctgggt gatcgtcaat ccgacgccgg aaacgctgga
      181 gcactacaag caaattgaat cacgaagggc taaagtcacg gcgcaactaa agcaactgcg
      241 caagacgacc tccatcacgc gagatggacg tcacattgtt ctttcggcaa atatcgaact
      301 tccagaagac gtcgatgcag ttgtagccaa cggagcggag ggaatcggac tttatcgcac
      361 cgagtttctt tatttgaacc gcgaaaccct gccaagcgag gacgagcaat acgaaaccta
      421 ccgaaaggtt gccgagcgcg tacgtcccaa tccactaatc attcgaactt ttgatttggg
      481 cggcgataaa ctggctactg gtgcagcgga catcggcgat gagttaaatc ctttccttgg
      541 ctggcgcgcg atccgatttt gtcttgagaa tcaggacatg tttaaaacgc agctgcgagc
      601 cattctccgc gccagcaccg cgggcaatgt aaaagtcatg tttcccatga tctctgggtt
      661 ggaggaattg cgccgcgcca tggccgtgct cgaggaatgt aaacaacagt tgcgcaactc
      721 aaaagtcgag atggctgaaa gagtcgaagt tggcgcgatg gtcgagatcc caagcgctgc
      781 catctgtgca agcgcgcttg cacgcgaggt agatttttta agtatcggaa cgaatgacct
      841 cattcagtat gcgcttgcag tagaccgggt gaatgaaaag gtagcgtatc tgtacgagcc
      901 gacgcatccg gcgatacttc gtttgctcaa gatggttgcc gacgcggcgc acgcgaacga
      961 gatctgggtg ggcgtttgcg gtgagatggc aggtgatgtc gcgctggtgc cgctcttgtt
     1021 aggcttagga gtggatgaac tcagcgcatc agcgacgctg gtgccgcgag tcaagcgtgc
     1081 cgtgcaaagc ctgaccattc ctgaatgcag cgaactggtc gagcagacct tgaagctcaa
     1141 cactgcatcg gaaattctag agcgttgcct gcaactggca gacagtcgct atggcgatct
     1201 gctcggttaa gatcgaacag aatgaagaga ccgcgcgccg cgctactctt ccccttcagg
     1261 atcagtcttg agtccctctt cctccatctt gcgcaggaca tcgctcatat cgtctacttc
     1321 gtcccacaca tcctggctaa cgtaaatggg cgccttctgc tgcgtagcca tggcgatgca
     1381 atcgctcggt cgtccatcca actcgatgat ttttttttgc tgcaactcgt tttcgacctg
     1441 aatgatgacg cgcgcgtagt aagtggcgtt cttcagatcg ttaatgatca cgcgctcgac
     1501 ttttgcgccg agcgccgcga gcaaatgcgc catcaaatca tgagtgaggg gacgctcttt
     1561 agtgatttga cgcatgaaca ttgtgatggc gctgccgaca gtttgatcga cgtagatgat
     1621 gaaaaccttc tcattgttgc cgaggaaaac cgcgcatcca ccgctcgtcg gtaaaactgc
     1681 ccgcacctgc acctcgatta ccgtcttgtt catcgcggaa acagtacgtg ggcgaacagg
     1741 aaaaacaagc tgtgcacagg acggctcatt catcacctgc gttacacgcg tcagacgaag
     1801 attttcgcgg tacgagcttg aatgttctgc acgctgatta atatgcgcat tacggttgat
     1861 attgcgctgt gcaacgacaa tgaaatcaga gtgggatatc gaatcagcca tcgccacata
     1921 caacgtggag ggatggggcg agggctattt tacggtcaac agctccggca acgtcgaagc
     1981 gcggccgttg aagaatgacg gcggttcgat tgatttgctg gaagtcgtca acgaagcgcg
     2041 tgccagaaaa ctcggttttc cattgttaat tcggtttcag gatttgctcc ggcaccgggt
     2101 cgaatcaatt aatcgcgcat ttcaaagcgc gatctctgag ttcggatatc aaaatcacta
     2161 tcgaggcgtt tttccgatca aagtcaacca gctacgcgaa gtcgtcgaag agattgtcga
     2221 tgcaggcgaa cgatttaatt ttggactcga ggcgggcagc aagccagaac tcgtcgcggc
     2281 gctggcgatg cagaaaggcg ccgagacttt gatcatctgc aatggttaca aggatcctgc
     2341 tttcattcgt ctcgcgttac tcggtcgcaa actgggcaaa ccggtcgtca tcgtcgcaga
     2401 aaagctcgag gaggttgagc aaatcatccg tgcgtcgaag gaggttgggg tcgagccttg
     2461 gattggaatt cgtgctcgct tacacagcaa aggctccggt aaatggtcgc cgagcggcgg
     2521 cgagaacgcg aagttcggcc tcgacacaac gaatctggtc gctgcgagtc agatgttaaa
     2581 ggaggccggt gtggcgcact gcctctaact tgtccatttc cacgacggat cgcaggtgcc
     2641 ggacatttcg acgatcaagc gcgcagtgcg cgaaggcgcg cgatattacg caaagctctc
     2701 aaaacttgga cacgaacttg gttatctcga cgtcggcggc gggctcggtg tcgattacga
     2761 tggatcgcgc agcgactttg acagttcgac caattattcg ctccaggaat acgcgaacga
     2821 cgtggtctgg aacatcatag acgtttgcga ctctgaaggc gtcgcgcatc cggcgattgt
     2881 gagcgaaagt gggcgcgcca ctgtcgcgca tcattctgtg ctagtggtcg aagcgtttag
     2941 ttcgatcgaa aagacagccc caaagctcaa ggtcgaaacg agcgaaaacg accacaaact
     3001 ggtagcggat atccttgacg tgaaacagcg gttgaaacgc ggaaatcgtc tcgagagtct
     3061 gcacgacatc aagcaaatca aagaggaatc gcagcaaacg ttcgatctcg ggctgctgga
     3121 tctcgaatcg aaagcgaaga tcgacacggt ttactggcag gtcgcgcatc aaatcgtgaa
     3181 catgcatcgc ggcttgcgtt atgtgccgga cgaagtgaag cagctggaaa caacgctcgg
     3241 cgatcagtac atctgtaatt tctccgtgtt ccaatccctg ctcgatcatt gggcgctagg
     3301 gcaactgttc ccaatcatgc cgatccatcg gcttactacg ccgcccgatc gcaacggcac
     3361 catcgtggat atcacctgcg attcagacgg aagagtctgc aagtttatcg atttgcagga
     3421 tgtcaaagaa acgctgccgc tgcatcggat tcatccagga gaaatttatt acctcggcct
     3481 gttcatggtg ggcgcttatc aggacatcat gggcgacctg cataatctgt ttggccgggt
     3541 cacggaggta cacgttttcc tcgacccaga tgaagaatca ggctggtaca ttgaggaagt
     3601 gatcgagggc agcacaatcg gagaagtgct cgcaatgacg cagtgggaca aactcgagct
     3661 gatgcgcttg ctcaaagcgc aagtagatga ggcgatcaag accgatcgcc tcaagcctaa
     3721 cgacgcgatg cgactgctcg atgactacga gcgtttcctg caggaataca cttacctgag
     3781 tttcaatggc gtgaaggcgc ccgcgcaacc gggcagttgg ctgccgctca gctgaacgct
     3841 cctgatctca catcgcttgt cattcccgaa gtcgaggaat ggagtgagtg ggacgagcga
     3901 gatagacggt tgcgccgcga gggtagcggc gagagagtcg ggagacgaac gagtcaatct
     3961 ctcgatataa atgacgcaac tttctccaac tcccattaag aatgcattgc agagcaccgt
     4021 gcagatcgac tcggttcgtg tgcagggatg ggtgcgcacg cgacgcgatt cgaaagactt
     4081 ttcgtttatc gaactgaacg atggctcatc tctgcgcaat cttcaggtca tcgcgaaaaa
     4141 ggatgcggtg cccaattacg cagaaatcca acggctcaac actggtgctt cgattgttgt
     4201 gcagggcgcg ctggtcccgt cgcagggcaa aggacagaaa tgggaactca tcgcgcgaga
     4261 tatcgagatt gtcggtggcg ccgacgaaag ttatccgctc cagaaaaagg ggcacacgcc
     4321 tgaatttttg cgggagatcg cacacctgcg tccacggtcg aatcttttcg gttgtgtgtt
     4381 ccgtgtgcgc agccgtctcg cgtttgccgt tcaccagttt ttccaggatc gcggtttcgt
     4441 ttacgttcac acacccatca tcaccggaag cgattgcgaa ggcgcaggcg agttgttccg
     4501 ggtttcaacc atcgacatca aaaatccgcc gcggaaaaac ggcgagatcg attatgcgca
     4561 ggattttttc gcccgccaaa cttatctcac cgtcagtgga cagctggaag cggaggcgtt
     4621 cgcctgcgcg cttaccaagg tttacacctt cggcccgaca tttcgtgccg agaattcaaa
     4681 cacgtcacgg catgccagcg agttctggat gatcgagccg gaaatggcgt tttgcgatct
     4741 gaccggcaac atggatctcg ctgaagagtt ggtgaagtat ttgatcgccg acgcgagaaa
     4801 gcagtgcgcc gaagaattgg aattgttcgc caaattcgtg gacaaggagt tgcttgcccg
     4861 actcgatttc gtcattgaaa ggccgtttca gcggatcacc tacactgagg gagtcgagct
     4921 tttgaaaaag agcggcgaaa aattcgagtt cccggtcgat tatggcacaa acctgcaatc
     4981 ggagcatgag cgctggcaca ccgagaaaca tttcaaatgt ccgatcacgg tatttaattt
     5041 cccaaaggaa atcaagccgt tttacatgcg ttccaacgat gatggcataa ccgtagcggc
     5101 catagatttg ctggtgccag gaatcggcga gatcgtcggc ggcagccagc gtgaagaacg
     5161 actggaaatg ctggaggaca acatgcgacg tcaccacatg gatcctgccg attataaatg
     5221 gtaccttgat ctgcgtcgtt atggaactgt gccacactcc ggctttggtt tgggcttcga
     5281 gcgcatgctg atgttcatca ccggcatttc gaacattcgc gacgtgattc ccttcgcgcg
     5341 cacgcccggc agcgccgagt tctaggtagg gacgcgcggc tcgccggtcc tgtcgttacg
     5401 gctgcccttc tcgaaccctt gtgaactcga gcttggaatc ccctagctcc tgaagcacga
     5461 gccgatcgct cgaaagttcc attaggtaaa ctgttgtcgc gaacggtgtt tcgattttga
     5521 ttcgttcctg atcaccgaac ttatatctgc cgcgaacttc tccgacgagc accgagccgt
     5581 tactcgaaaa ttcccaaact atttgatctt cagctcccga catccgccat ttgccgacga
     5641 tgctggaatt cccgcagccg ggcacaacaa aaagcagaac tgccgaagcg ggcaccaata
     5701 gcaaacgcac acgtcgcgga aaaccaaatc gcatcagccc cagttataaa tcacgtgcga
     5761 ttgtcaggtc gagcgaaagc taaatgttat ttcccagtcg tctgttcttc aggtggcggg
     5821 agcacgtatg tgtagaacaa gtgcttgccg tgccggcttg ttacttcgcc gtgcttgccg
     5881 ccgggaaaaa gctcgtgtgt cgtctgttca tattgctcgt ttcctgcgaa aaagaggaat
     5941 gccactcctt cgttgtcccg agttatagac ggcagttcag tcgcaggatt ggtcagcagc
     6001 gtccacttct gttctctcac gaggtattgc atagttatgg gatcatacgg ccacgggctc
     6061 tggcctactg tgaaaacttc atagttgcgg ccaagtgatg cggagtagcg gctctgagcc
     6121 gtttgcacct cgtaattccg ttgggccgac ttgtacgctg tgcttttgag gctctcaggg
     6181 tcagcgtaat aacgacggaa ataaaagttc agattgcacc agccaagcac aagtaacgca
     6241 agtccgaccg ttgccggcaa gatccagcgc aaccggggtt cctccgattg ccccgccgtt
     6301 atccatgcgc ctacaggcag tgccagcgca acataaaaag ctgggaaggc aggagtccaa
     6361 tgattgatca gaggtggcac gctgttcgga tatgccacga gcgttccgcc aacgaacaag
     6421 acgcctaatc cggaggcaag tacgagaaac gcggccggat gacgccagtg ccacaaaagc
     6481 agcgcaacgc ccgggaccag cagagcggct tcggcaggta a
//
LOCUS       DATDAJ010000374         4341 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2090528, whole genome shotgun sequence.
ACCESSION   DATDAJ010000374 DATDAJ010000000
VERSION     DATDAJ010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4341
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2090528"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..558)
                     /locus_tag="VIS53_09335"
     CDS             complement(<1..558)
                     /locus_tag="VIS53_09335"
                     /inference="COORDINATES: protein motif:HMM:NF024575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY5768023.1"
                     /translation="MAFARATAFKYLRRAYEQNRLAHAYLITGAPGSGKETLAAELAN
                     LVNGTPIGDIFSSKAREIFVARPESKSRRIVTAQIRALEHALQMRAANQGRKVAIIPD
                     ADRLQTEAANAFLKTLEEPPKDSLLLLLSALPEALPETVLSRCIAIPLASEGETRSKK
                     EEEKLVKLLQQTSRHTTWSVQFAYRL"
     gene            complement(578..2251)
                     /locus_tag="VIS53_09340"
     CDS             complement(578..2251)
                     /locus_tag="VIS53_09340"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5768024.1"
                     /translation="MAVVVVCIALAVIVFVAFGQTIKHEFINYDDNEYVYNNSTVKNG
                     LTPAGIAWAFTHVHSANWHPFTTISHMVDCTLYGVQPWGHHLTNVLLQMAAAILLFFA
                     LRQLTGSLWASAAVAALFAVHPLHVQSVAWISERKDLLSGIFFALTLWAYACYARANR
                     KSRSRYYLLVVSFLAVGLMCKPTLVTLPFVLLLLDYWPLRRAERPQAWRALMVEKIPL
                     FVLTALSCVATIIAQKEALIPIRHLAFAERMGSALVAYVVYLRQLIYPAHLSIVYPYP
                     EGGMQFIQIVGAFLFLGAVTVFMFLRRKTQPYLLVGWLWFLGMLVPMIGIIQVGPQPW
                     ADRYTYLSYIGLYILAVWGVVELSRRLPRGGQMAAVLGSLLVIVLTAQSFSETTAWRD
                     NETLWHHALANTSNNYIAENNLGKALLDQGRLDEAIGHLRKALEIYPAYPEANNNLGY
                     ALANKGNASDAIPFYEAALKARPGYVRAHNNFGVTLAVLGRTDAALTHFNDALRIDED
                     DPDVHYNLANLLLQLGRRDEAATHLKASVRLRPDDAEAQEQLRELMAQP"
     gene            complement(2338..2991)
                     /gene="tmk"
                     /locus_tag="VIS53_09345"
     CDS             complement(2338..2991)
                     /gene="tmk"
                     /locus_tag="VIS53_09345"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEY5768025.1"
                     /translation="MPRLPFITFEGSEGSGKSTQADKLAARLQRHDVPYILTREPGGT
                     PIGESIRDLLQFAPHNSTMTPQTELLLFEASRSQLVREVINPALERGICVIADRFFDS
                     TTVYQGAARRLDRGMVDRLNTFAAGDCIPDITFALDVDAATAQARMLKPRRPDRMEQQ
                     SPEFYEQVREGYRELAARESRRVVLIDGSRNVDEIENEIWQVLLSRFPTLRKTPQSH"
     gene            3129..3539
                     /locus_tag="VIS53_09350"
     CDS             3129..3539
                     /locus_tag="VIS53_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEY5768026.1"
                     /translation="MKSFWLVKQEPSSYSWSDFVADRETSWTGVRNFSARNNLRKMRT
                     GDEVLFYHSGDEKGVVGIARVTRTAYPDPTAKEGDWSTVDLAAVKPLARTVTLREIKS
                     NSRLKGMPLIRQSRLSVMPLAEPEFREIVNMTAA"
     gene            3681..>4341
                     /locus_tag="VIS53_09355"
     CDS             3681..>4341
                     /locus_tag="VIS53_09355"
                     /inference="COORDINATES: protein motif:HMM:NF021601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY5768027.1"
                     /translation="MSTIAATEFLPLVATAAAAADSVVVSLHDVAPSTQQIASTVISE
                     LSAHGVRVCSVLVVPDYHHEGPLAKHREFVTWLRGLEADGHEVVIHGYFHERPPQANE
                     SLRDKFMTRFYTQNEGEFYDLGYEEALRRITTARDQFRALGLKPRGFIAPAWLLGNEA
                     EQAIRDAQLEYTTRLRAVCDLRSDTIFPARTLVYSVHNTWRRALSRSWNATLFRLLKT
                     KP"
BASE COUNT         1006 a         1177 c         1171 g          987 t
ORIGIN      
        1 aagccgatag gcgaattgaa cactccaggt cgtatggcgg gaagtttgtt gcagcaattt
       61 cacgagtttc tcttcctctt tcttgctccg agtctcgccc tctgacgcca gtggaatagc
      121 gatgcaccgc gaaagaactg tttccgggag agcctcgggc aatgcgctta gcagaagcaa
      181 cagcgaatcc tttggcggtt cttccagtgt cttgagaaac gcgtttgccg cctcggtttg
      241 aagcctgtca gcgtcgggga taatcgctac tttgcgcccc tggttcgctg ctcgcatctg
      301 aagcgcatgc tccagtgccc ggatctgcgc agtgacaatt cgccgcgatt tcgattcggg
      361 acgggcaaca aaaatctcgc gagctttgga cgaaaaaata tctccgattg gagttccgtt
      421 aaccaaattg gccagctccg cagcgagcgt ttccttgccg ctgccgggag ctcccgtgat
      481 cagatacgca tgcgccagtc gattctgttc ataggcgcgt cgcaagtact taaacgctgt
      541 ggcgcgggca aaggccattt agtttgtgcg tgcaggttta tggctgagcc ataagctcgc
      601 gcagttgttc ttgtgcttcg gcatcatccg gcctcaagcg tacactggcc ttcaggtggg
      661 tggcagcttc atcgcggcga ccgagctgta gcaggagatt tgccaaatta tagtgtacat
      721 ccggatcgtc ctcatcgatt cgcaatgcat cattaaaatg agtaagagct gcatcggttc
      781 gaccgagaac cgccagcgtc acgccgaagt tgttgtgagc gcgcacataa ccgggccggg
      841 cctttagcgc agcttcgtaa aagggaatcg catcgctcgc attgcctttg ttcgccagcg
      901 cgtagccgag attgttgttt gcttccgggt aggcgggata aatttccaaa gcttttcgca
      961 agtgaccaat tgcctcatcc aaccgcccct ggtccagcaa tgcctttccc agattgtttt
     1021 ctgcgatgta gttatttgag gtgtttgcca gcgcatgatg ccacagcgtc tcgttatcac
     1081 gccaggcagt cgtttcggaa aaactttgcg ctgtcaatac aatgaccaga agcgatccaa
     1141 gaactgctgc catctggcca ccgcgcggca agcggcgcga caactccacg actccccaga
     1201 cagctaaaat gtaaaggcca atgtacgaca ggtaagtgta acgatcagcc cacggctgcg
     1261 gccccacctg aatgatgcca atcatcggaa ccagcatacc gagaaaccac aaccatccga
     1321 ccagcaggta aggttgtgtt tttcgccgca aaaacatgaa aaccgtgaca gctccgagaa
     1381 aaagaaaagc tccaacgatt tgaatgaact gcatgccgcc ttcggggtaa ggatagacga
     1441 tggagagatg cgccggataa atcaattgcc gtaagtacac cacgtaagcc actagtgcgc
     1501 tgcccattcg ttctgcaaag gcgagatgcc gaattggtat cagcgcttct ttttgcgcga
     1561 tgattgtggc cacgcacgaa agcgccgtca gtacgaatag agggattttt tccaccatca
     1621 acgcacgcca cgcctgtggt ctttccgccc tacgcaatgg ccagtaatca agtagcaaaa
     1681 gtacaaaggg cagggtcaca agagtcggtt tgcacatcag ccccacagct aaaaaactca
     1741 caaccaatag ataataacgg ctgcgcgatt ttcggttcgc acgcgcgtaa caggcgtacg
     1801 cccaaagcgt aagcgcgaag aatatcccgc ttagcaaatc ttttctttcc gatatccaag
     1861 cgaccgattg cacatgcagt gggtgaaccg caaaaagcgc ggctaccgcg gcgctggccc
     1921 aaagcgatcc ggtgagttgc cgcagcgcaa aaaatagaag gattgccgct gccatctgca
     1981 gcaacacatt ggttaagtga tgtccccacg gttgtacgcc gtataaggtg caatcgacca
     2041 tgtgcgatat tgtagtgaac ggatgccaat tggccgagtg aacgtgggtg aaggcccagg
     2101 caattccagc aggcgtgagg ccgtttttca ccgtcgaatt attgtaaacg tattcgttgt
     2161 cgtcgtaatt aatgaactca tgcttaatcg tctgaccgaa tgcgacaaag acgatcaccg
     2221 ccaaagcaat gcaaacgact acaacagcca tgcgatcgtc gtgaggacta atcggtcggg
     2281 ccgttggctg tatgtgcgaa cttttcctcc gccgtttgcg agctttgctt cccataccta
     2341 gtgagattgc ggggttttcc gaagggtcgg aaaacgcgac agaaggacct gccagatctc
     2401 gttctcgatc tcatccacgt tgcgcgagcc atcgatcagc acaacccggc gggattcgcg
     2461 tgcggccagt tcacgatagc cttcgcgaac ttgttcgtaa aactcaggcg actgctgctc
     2521 catccggtcc ggcctgcgcg gtttcagcat tcttgcctgc gccgtcgcag catcaacgtc
     2581 gagcgcaaag gtaatgtccg gaatgcaatc gcctgcagcg aacgtgttta aacgatcaac
     2641 catcccgcga tccaatcttc gcgcggcgcc ttggtaaacg gtcgtggaat caaagaaacg
     2701 gtcggcgata acgcagatgc cgcgttccag ggccggattg attacctcgc gcacaagctg
     2761 gctgcgacta gcctcaaaga ggagcagctc ggtctgaggc gtcatagttg agttatgtgg
     2821 agcaaattgc aaaaggtcgc ggatactttc gccgatcggc gtaccgcctg gttcccgcgt
     2881 caggatataa ggaacgtcgt gtcgctgaag acgtgccgcg agtttgtcgg cttgtgtgga
     2941 ctttccgctt ccttctgatc cttcgaacgt gatgaacggc agtcgcggca tttgccgatt
     3001 gtgaaacaaa gcagctcaaa agtcgaacgt actaactgta gcgtccgctg tctcagtgga
     3061 tgagatccaa cgccgcgcta caactacacg ccgatttccg cggagaatgt tccggattat
     3121 ctttacccat gaaatctttc tggctggtga aacaggagcc gtcttcgtat tcgtggtctg
     3181 attttgttgc cgatcgcgag actagctgga ccggcgtgcg caatttctct gcgcgaaata
     3241 atcttcgcaa aatgcgaacc ggcgatgaag tcctcttcta tcatagcggc gacgaaaaag
     3301 gtgtagtcgg cattgccagg gttacgcgga ctgcttatcc ggacccgacg gcaaaggaag
     3361 gcgactggtc caccgtcgat cttgccgcag ttaagccact ggcccggacc gttacacttc
     3421 gggagatcaa gagcaattcg cgcctgaaag gaatgccgtt aattcggcaa tcgcgtctct
     3481 cagtcatgcc tttggccgaa ccagagtttc gggaaatcgt aaacatgact gctgcgtagc
     3541 gctgtagtgt gcgctctcag cgcatggggt gggctcgaat tatccgctga agacagcgct
     3601 acaggacggc tgggaagccg tcgttccttg ggtacctttt tgccttgttc aaagctgctc
     3661 gaagacagaa aatttgcgat atgagtacaa ttgcggcaac ggaattcctt ccgcttgttg
     3721 ccaccgccgc tgccgcggcg gattccgtcg tcgtgtctct gcacgacgtt gctccttcca
     3781 cccagcaaat cgcaagcacg gttatctcag aattgagcgc gcacggcgtg cgcgtttgtt
     3841 cggtccttgt ggtgccggat tatcaccacg aggggccgct cgccaagcac cgcgaattcg
     3901 tcacatggct tcgagggttg gaagcggacg ggcacgaagt tgtcatccat ggctattttc
     3961 atgaacgccc gcctcaggca aacgagagtt tgcgcgacaa attcatgacc agattttata
     4021 cccagaacga aggcgagttt tacgatttgg gctacgaaga agctctgcgg cgcatcacca
     4081 cagcacgaga tcaattccgc gcactcggac ttaagccacg cggttttatc gcgccggcgt
     4141 ggttactggg aaacgaagca gagcaagcca ttcgtgatgc gcaattggaa tacacaacac
     4201 gcctgcgcgc tgtatgcgat ctccgctccg atactatctt tccggcgaga acgcttgttt
     4261 atagtgtcca caatacttgg cggcgcgcgc ttagtcgtag ttggaacgcg acgctttttc
     4321 gtttgttgaa aaccaaaccg c
//
LOCUS       DATDAJ010000375         5607 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2096832, whole genome shotgun sequence.
ACCESSION   DATDAJ010000375 DATDAJ010000000
VERSION     DATDAJ010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5607
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2096832"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VIS53_09360"
     CDS             <1..464
                     /locus_tag="VIS53_09360"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF013782.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY5768028.1"
                     /translation="CISTNVQVMFFDTDCGGVVSNIAYLRFIEIARTHLAEELGLAVV
                     EMAQKERYPVVVRTEIDYRRAARLGDRLVIEGWLDRAERARFWCAFHITRPQDNTLIA
                     ECRQMLALIEMPTGKLLRLPEHWKTYDKVESSERIEHESRAGTVPGGECVQ"
     gene            461..2251
                     /locus_tag="VIS53_09365"
     CDS             461..2251
                     /locus_tag="VIS53_09365"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5768029.1"
                     /translation="MTASARTLSIEETLLEPPALPPPPTRHVLLIILIALAALLHVVT
                     IGTGDLYSETEGQYAGAAREMVASDNWLLPTNNGIPRLQKPPLLYWLIIASYKILGVN
                     EAAARLPVALAVVATVALIFLIGEKLSDYWRGFIAGLIYLSFCGTFLLARIVMPEPLV
                     TAFMTGAMFCGICGYGRRRHRRLWFAGVWIFVALACLTKGMLGIVYPAVVFVLLSIFY
                     REARIRFRALLRWEYVLIFLLILAPWHIWAQWNFPHYFRYVRSEWLGHLRGLTDETHD
                     FLGMPAYQFVILHVAWWFPWSIALLPGVIFGWRRVTRPGEINFGDALLLCWMVVVFIP
                     LLFLGQRQDYYSMSMWSAFALWAAMAWDRTPQSLRAAGAIAVGVIGLILAGGALFVAP
                     AARALNGTWGIMDERWTAWRALQDMPVSAWLALRPMLVITAVSFVFFSTIALYFIFKQ
                     HGKLAAIALATSMIPAGLSMVIGVAKTAPYFSLADVARYLNPRLEAGGHAMFEGPLDN
                     SSSLIFYLNRKFFFVNQNPRKEAPMGAPATDIFLNEQAVLDKWDQPEPVYLIVEQSRA
                     DYWKERVVSRVHVYHQVTTSGTYVVLSNQL"
     gene            2386..2541
                     /locus_tag="VIS53_09370"
     CDS             2386..2541
                     /locus_tag="VIS53_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small basic protein"
                     /protein_id="HEY5768030.1"
                     /translation="MSQHRSLKGASTIAAKRNVLKRFERIELLKKRKQWKDGQKVIGL
                     PKTKPDV"
     gene            2580..3317
                     /locus_tag="VIS53_09375"
     CDS             2580..3317
                     /locus_tag="VIS53_09375"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY5768031.1"
                     /translation="MRLNRFLAAAGIGSRRHCDELIAAGRVTINGQTCTDFSAQPDAR
                     DHVKVNGKLVHVAPPLTIMLHKPAGFVSTRRDPHVRDTVFDLLPKKFSRLFNIGRLDA
                     QTEGLLLLTNDGDLAQSLTHPRYKIEKEYEVTLDRPWEPELTSKLLRGIFLDGERARI
                     ARLHSLSPVRLRVVLRQGINRQIRRMFEAIGYRIKDLIRVRIANLRLGDLPRGHWRPL
                     TKRELESLEGRGPGRPRAASQQLRPPQ"
     gene            3314..4120
                     /locus_tag="VIS53_09380"
     CDS             3314..4120
                     /locus_tag="VIS53_09380"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY5768032.1"
                     /translation="MKLDGSNALITGASAGIGREFACQLASRARSMILVARRDERLIE
                     LADQLRREHSKLLVHVRKVDLADLGQLQAFLEQLDREKLEVDLLINNAGLGDSGPFAE
                     SDPDRNKEMTVVNVETLTLVTRHLLPRMIAQHRGAILNVSSSAGFLPIPGSAVYAATK
                     AYVTSFSEALRAELRGTGVSVCALCPGPVVTEFQQVAKREGMKPDIGPKFIVVTVEQV
                     VRDALAAVEADRPLIIPGFAMKLLMLLARLMPMPVLRWVARMSPRKRGVV"
     gene            complement(4157..>5607)
                     /locus_tag="VIS53_09385"
     CDS             complement(4157..>5607)
                     /locus_tag="VIS53_09385"
                     /inference="COORDINATES: protein motif:HMM:NF021436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2142 domain-containing protein"
                     /protein_id="HEY5768033.1"
                     /translation="VLIFSAAFPFFSNIDEDLHFDLITQYSNAQVPRSFDRLKEETLN
                     WIVPYASPEFLSAPERFPDGKFPAPLWKQPWSKVEPEIAATRAAWSSEINFESSQPPL
                     YYEVAGVWWWIGKQIGLVGIQSLYWIRFLNAALMAIVVWLGYVAARTIAPERLDLRIG
                     VPLLVAFIPQNVFYAMNNDVLSPLCFGVLFLCVLRWLRTDTPSLWLGAVTGVAIASTY
                     LTKLSNLPLSVIAVVVILARLGVIVRRSPRAGLIALLALLLCAAVPIGSWMFWLKLQF
                     GDITGSTAKIAFLDWTRKPFVEWWQHPIFTPHGFWVFWSGLIGTFWRGEVEWNGRRFD
                     WQIADQVYAVSSLVFITAAVLGLRKPSALSAFQRQAIAVAILTFAAGVAFLGLLSIQF
                     DFGSCVNPSRSHPYFTSGRLLSGAIIPFALSYVYGISWLCRLAASRFRQTRWIDIALP
                     LIVLGAIVVFSQASEIFVTHPVFASEHNWFHR"
BASE COUNT         1263 a         1539 c         1558 g         1247 t
ORIGIN      
        1 cctgtatcag cacaaacgtg caggtaatgt ttttcgacac cgattgcgga ggcgttgtgt
       61 ccaatattgc gtatctgcgc ttcattgaaa tagcacgcac acacctcgcg gaggagctcg
      121 ggctcgcagt cgtggagatg gcgcaaaagg aaaggtatcc tgttgtggtc cgcaccgaga
      181 tcgattatcg gcgcgcggca aggctcggtg accggctagt gattgaaggc tggctggatc
      241 gcgcagagcg cgcgcgcttc tggtgcgcat tccacatcac gcgcccacaa gacaacacgt
      301 tgatcgccga gtgccgccag atgctcgcgt tgatcgagat gccgacggga aaattgctgc
      361 gtttacctga gcattggaaa acgtacgaca aagtcgaatc cagtgaacgc atcgaacacg
      421 aatctcgagc cggaacggtt cccggtggag aatgtgtgca atgacggcaa gcgctcgcac
      481 cctaagcatc gaagaaacgc tgctggaacc gcccgcgttg ccgccgccgc ccacgcgtca
      541 cgttctgctc ataattctga ttgcgctggc agcgctgtta catgtggtga ccattggtac
      601 cggcgatctc tacagcgaga cggagggcca atacgctgga gccgcgcgcg agatggtggc
      661 cagcgataac tggttgctcc caacaaacaa cggcataccg cgcctgcaaa aaccgccatt
      721 gctctactgg ctcatcatcg cttcgtacaa aattcttggc gtgaatgagg cagcggctcg
      781 actgccggtt gcgctggctg tcgtagccac ggttgcactt atctttttaa ttggcgaaaa
      841 gctctcggat tactggcgcg gtttcatcgc aggtctgatc tatctcagct tttgcggcac
      901 gtttcttctc gcgcgcattg tcatgcccga accgctagtc accgcattca tgaccggcgc
      961 gatgttctgc ggaatatgcg gctatgggcg gaggcgccat cgacgcctgt ggttcgccgg
     1021 tgtctggatt ttcgttgcgc tagcgtgcct aacgaaaggt atgctcggca tcgtttaccc
     1081 cgctgtggtt tttgttttgc tctcgatttt ttatcgcgaa gcgaggatac ggtttcgcgc
     1141 gcttctgcgc tgggaatatg tgttgatttt tcttttgatc ttggcgccct ggcatatctg
     1201 ggcacaatgg aatttcccgc attattttcg ttatgtcaga tccgaatggc tgggacacct
     1261 gcgcgggctc actgatgaga cgcacgattt cctcggcatg cctgcttatc aatttgtgat
     1321 cctgcacgtg gcgtggtggt ttccatggtc tatcgcgttg ctgccgggcg tcatttttgg
     1381 ctggcgccgc gttacacggc cgggggagat caatttcggc gatgcattac tgctttgctg
     1441 gatggttgtg gtgttcattc cgctgctctt tttgggacag cgacaggatt actattcgat
     1501 gagtatgtgg agcgcgtttg cgctctgggc agccatggct tgggatcgga ctccccaatc
     1561 gttgcgcgca gcgggcgcga tcgcggtggg tgtcatcggt ctgatccttg cgggcggagc
     1621 gctgttcgtg gcgcctgccg cgcgtgcttt aaacggaact tggggaataa tggacgagcg
     1681 ctggaccgcg tggagagcct tgcaggatat gcctgtgtcc gcgtggctag cactgcggcc
     1741 catgcttgtg attacggctg tctcattcgt gttcttctcg actatagccc tctacttcat
     1801 tttcaaacaa cacgggaaac tcgcggccat tgctctggcg acctcgatga tcccagccgg
     1861 gctgagcatg gtaataggcg tcgcgaaaac ggcgccctat ttctcactcg ccgatgttgc
     1921 ccgttatcta aatccgcggt tggaggcagg cggccacgcg atgttcgaag ggccactgga
     1981 caacagcagc agccttattt tttatctcaa tcgaaaattc ttttttgtta accaaaatcc
     2041 ccggaaagaa gctccgatgg gcgcacccgc cactgacatt tttctgaacg aacaagcggt
     2101 tctggacaaa tgggatcaac ccgaaccggt ttacttgatc gtggagcaaa gccgggcgga
     2161 ctactggaaa gagcgagtcg tcagccgggt tcacgtttat caccaggtca ctacatccgg
     2221 cacgtacgtt gtgcttagca atcagctgta gggaggttga tttgttgaac agttaaaggg
     2281 ttagaaggtt ctgtgcgttt cttgaaaaac ttctgcggtg gcttaatgtg cccgctcgct
     2341 tcccgttgta gccatttaac tgtttaacct tttaacctat aaaccatgtc gcaacatcgc
     2401 agtttaaaag gggcgagcac aattgcggct aaacgcaacg tgctgaaacg cttcgagcgc
     2461 atcgagctcc tcaagaaacg caaacagtgg aaggacggtc agaaagtgat cggcctgccg
     2521 aagacaaagc ccgacgttta gcacgttgaa gcgttgaagc gggccgttaa gctcgtttga
     2581 tgcgcttaaa tcgcttcctc gccgctgcgg gtatcggatc gcgccggcat tgcgatgaat
     2641 tgatcgcggc gggccgggtc acgatcaacg gtcagacctg caccgacttc agcgcgcaac
     2701 ctgacgcgcg cgaccatgtg aaggtgaatg gcaaacttgt tcatgtcgcg ccgccactca
     2761 ccatcatgtt gcacaagccc gccggattcg tttcgacgcg gagagatccg catgttcgcg
     2821 atactgtttt cgatttgctg ccgaaaaaat tctcgcggct gttcaacatt gggcgcctgg
     2881 acgcacaaac cgaaggtctg cttcttctca caaatgacgg agatcttgca cagagcttga
     2941 cgcatccacg ttacaaaatt gagaaggaat acgaagtgac actggatcgc ccgtgggagc
     3001 ccgaactgac ttcgaaattg ctgcgcggaa tttttctcga cggtgagcga gcaaggattg
     3061 cgcgactcca ctccttgtcg cccgtccgcc tgcgcgttgt ccttcgacag ggaatcaatc
     3121 gccagattcg ccgtatgttc gaagccatcg gttatcgcat caaagatctc attcgcgttc
     3181 gcatcgctaa tcttcggctt ggcgacctgc cgcgcggcca ttggcgccca ttgacaaagc
     3241 gcgagctgga atccttagag gggcgaggtc cagggagacc ccgcgcggcg tcgcagcagc
     3301 tccgccctcc acaatgaaac tcgacggttc caatgcgttg atcacgggtg cttcggccgg
     3361 tattggtcgc gaatttgcat gtcaactcgc cagtcgtgcc cgctcgatga ttttggtcgc
     3421 acggcgtgat gaaaggttga tcgaactggc tgatcaactg cggcgagagc attcgaagct
     3481 tcttgttcac gttcgaaaag ttgatctcgc tgatctgggg cagttgcaag ctttcctgga
     3541 gcaacttgat cgcgagaaac tcgaagtcga tctcttgatc aataacgccg gcctcggcga
     3601 cagtggtcct tttgcggaga gcgatcccga tcggaacaag gaaatgacgg tcgtaaacgt
     3661 cgagacgcta acgttggtta ctcgtcattt gcttccgcgg atgattgcac agcaccgcgg
     3721 cgccatcctc aacgtcagtt cgtcggccgg ctttctcccg atccccggct ccgcggttta
     3781 cgccgcaacc aaggcgtatg tgacaagttt ctccgaagcg cttagagccg agctccgcgg
     3841 aacgggcgta agcgtatgcg cgctttgccc cggtcctgtg gtaacggaat tccagcaagt
     3901 cgccaagcgg gaaggaatga agccggacat cggtccgaaa ttcatcgttg ttacagtcga
     3961 acaggtcgtg cgcgatgcgc tcgcagcagt cgaagcagat cggccgctca tcattccggg
     4021 attcgcgatg aagctgttga tgcttctcgc tcgattaatg ccaatgcccg tcctgcgatg
     4081 ggtggcacgc atgtcaccga ggaaacgtgg cgtcgtgtag cagcaagagt gtgcctgcgc
     4141 agaccgcatg cgccggctac cgatgaaacc agttgtgttc gctcgcaaac accgggtgag
     4201 tgacgaaaat ttccgaggcc tgcgaaaaca caacgatcgc gccgagcacg atgagtggca
     4261 aagcgatatc gatccagcga gtttgtcgaa atcttgaagc cgcgaggcgg cacaaccagg
     4321 aaatcccata aacataactc agtgcgaaag gaatgatcgc accgctcagc aagcggcccg
     4381 atgtgaaata cggatgcgaa cgggatggat taacgcaact tccaaaatcg aactgaattg
     4441 aaagcaatcc aaggaaagcg actcctgctg caaaagttag aatcgctacg gcaatggcct
     4501 gccgttggaa tgcggaaagt gcagatggtt ttctcaatcc gaggaccgct gctgtaataa
     4561 acaccagcga agaaacggcg tacacctgat ccgctatttg ccaatcgaac cgtctgccgt
     4621 tccactcaac ttcgccgcgc caaaaggttc cgattaaacc cgaccagaaa acccaaaacc
     4681 cgtgaggggt gaaaatcgga tgctgccacc actcaacaaa cggcttccgc gtccagtcaa
     4741 ggaacgcgat tttcgccgtt gatccggtga tatcgccaaa ctgcagtttc agccaaaaca
     4801 tccaactgcc aattgggacg gcggcgcaca aaaggagtgc cagaagcgcg attaagccag
     4861 cacgaggact tcgtcgaaca attacgccaa gcctggcaag gatgactacg accgcaatga
     4921 cgctcagcgg caaattcgat agtttcgtca ggtacgtgga cgcaatcgcc acgcctgtga
     4981 ccgctccaag ccacaggctc ggcgtgtccg ttcgtaacca tcgtaaaacg caaagaaaca
     5041 gcacgccgaa acacagcggc gacagcacat cgttgttcat tgcgtagaac acattctgcg
     5101 gaatgaaagc gactagtagc ggcacgccga tgcgcaggtc gaggcgttcc ggcgcgattg
     5161 ttcgcgcggc cacataaccc aaccaaacca cgatcgccat gagcgcggca ttcaggaacc
     5221 gaatccaata caacgattga atgccgacca atccaatctg tttgccaatc caccaccaca
     5281 cgcccgcaac ctcataatac agcggcggct gagatgattc gaaattgatc tcgctgctcc
     5341 atgccgctcg tgtggccgca atctccggtt caactttcga ccacggttgt ttccatagcg
     5401 gcgcaggaaa tttcccatct ggaaaccgct ccggcgcaga caggaactcc ggcgaagcgt
     5461 aaggaacaat ccagttcagt gtttcttcct tcagccgatc aaaactgcgc gggacctgcg
     5521 catttgaata ctgcgtgatc agatcgaaat gcagatcctc atcaatgttg ctgaagaacg
     5581 ggaatgctgc tgagaaaatc aaaacac
//
LOCUS       DATDAJ010000376         7453 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2097224, whole genome shotgun sequence.
ACCESSION   DATDAJ010000376 DATDAJ010000000
VERSION     DATDAJ010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7453
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2097224"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1007
                     /locus_tag="VIS53_09390"
     CDS             <1..1007
                     /locus_tag="VIS53_09390"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5768034.1"
                     /translation="ALTAIVHTPAQLYLARFLLGAAEAGFFPSVIVYLSNWFIQEDRA
                     KATSNFMAAIPVSLIIGSPVAGWLLGHNWFAVEGWRWLFFVEGLPAILLGALAFFFLT
                     DKPRQARWLTGEQRQWISQKLEQEKPLPRQSTSIGQALRSRTVLLLATAAFLQYFIGY
                     SVIFWLPTILKKQSGFSDLQVGLFGAVPYVVALFAMLFNGWHSDKGRERRWHAAAPLL
                     IAATGLLCLISLPSSNVMTVLLLSVICMAMAFLPVFWAIPTEILTGSNAAVAVGTINA
                     LASLAGFAGPYAFGYLRAETGSFVAGFFALMFCAIAAGILMLLTPAAQPHGTRSMTSS
                     "
     gene            complement(1004..1507)
                     /locus_tag="VIS53_09395"
     CDS             complement(1004..1507)
                     /locus_tag="VIS53_09395"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR01313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046316 - gluconokinase activity [Evidence
                     IEA];
                     GO_process: GO:0046177 - D-gluconate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEY5768035.1"
                     /translation="MMIIIFGVSGAGKTTVGKLLARELGWRFIEADDFHPAANIEKMR
                     SGHPLTDEDRRPWLEQLRQQIERSLFAGENAVVACSALKRVYRDCLRIGDETKFVFLR
                     GDYALVERRLHSRHRHFMDRNLLQSQFDDLEEPQPDENVVTVELGRTPEEIVERIKAK
                     LNLPGSG"
     gene            complement(1504..2211)
                     /locus_tag="VIS53_09400"
     CDS             complement(1504..2211)
                     /locus_tag="VIS53_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768036.1"
                     /translation="MFVGHYSVAFACRTERNKIPLWVLFVAVQFLDYIWATLVLLGIE
                     KLRVIKGFTAGSMLDSYSHPYSHSLIMAVIWSAVAAFVYKTVCNRHPFDSAQGRLSHY
                     SKSAPLIVGLAVFSHWILDLIAHPRDLAIYDNRWKVGFGLWNYRDPEFALEIALLAGG
                     IVLYLARNRMPAIRKGAVIAFGLVLVIVQIGDTYVPRTPLTDKATVTGVWVFYTLFVL
                     IAFAVEKIGSRRKINAP"
     gene            2402..2920
                     /locus_tag="VIS53_09405"
     CDS             2402..2920
                     /locus_tag="VIS53_09405"
                     /inference="COORDINATES: protein motif:HMM:NF024865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5768037.1"
                     /translation="MKRLRLVSMLGSPTPAVGSPVTPAMLNGSSSRRRNLCLLLLVLA
                     LPAFAADRTEEVRATEIAFAKAFADRDAKKFFSYLTDDAQFLGRRNTMRGKQEVIAGW
                     SEFFKPAVAPFRWQPERVVTNAAGDLGFSSGPVFDEAGVQIGTFTSTWVRQPDGSWKI
                     LFDGGSACPTTK"
     gene            complement(2968..3621)
                     /locus_tag="VIS53_09410"
     CDS             complement(2968..3621)
                     /locus_tag="VIS53_09410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768038.1"
                     /translation="MTEQIIEKRRLASPATTPQALAWDRRNNKLWVGSRDLRRIYAID
                     PENGIVLKQQEAPGIPWAAVALNGELRFTIGEGSDDDRYIYRYTPDAGFSKMFACPEF
                     TGSYLSFDGRNLYMSQWYKKRLLQFDHTGNVIREINVGAEICGHTFANGSLYVLRGQE
                     HPNEDWRIARLNPQEETPIAEDIAVVPFASRSLTFDGETFWSNYRAKDTIISFLLPS"
     gene            3737..4162
                     /locus_tag="VIS53_09415"
     CDS             3737..4162
                     /locus_tag="VIS53_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768039.1"
                     /translation="MKIRTFLLCFAAATIGTSSADRDKSVTAAQVNGTWKTKGGEFKI
                     WALGKQRLQVEFSGVYEYKTPQGPMANEGEGSGIATIEGDTAILKPEGSDEECQITLK
                     FVGSKLVVTQTGICGFGHNVSAEGTYEKVSSKKPKFGSD"
     gene            4369..4953
                     /locus_tag="VIS53_09420"
     CDS             4369..4953
                     /locus_tag="VIS53_09420"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY5768040.1"
                     /translation="MPRCAWATTELAMSYHDNEWGVPVHDDRVLFEFLILEGAQAGLS
                     WNTILKKRENYRNAFDEFRPEKIARYGKRDVQRLLRNDGIVRNRLKIAATIENAKKFL
                     AVKNEFGSFDAYLWSFVNGKPIQNRWRTLADVPARTAESDAMSRDLLRRGFKFVGSTI
                     CYAFMQAIGMVNDHLVTCPRYVELGGSRRRSKQR"
     gene            5002..5436
                     /locus_tag="VIS53_09425"
     CDS             5002..5436
                     /locus_tag="VIS53_09425"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY5768041.1"
                     /translation="MKSDKDKIDISAVEDHDGILTIRGGGARRDWNGIHYKQGMSGKN
                     VGTTSLSANIATIPPGGVAYAHIHVGFEVILYIIEGKVRHEFGPGLKQVIENEAGDFI
                     YIKPGVPHEVFNMSDTKPVVAFVARSSADEWDNIIPYERHQR"
     gene            5548..6075
                     /locus_tag="VIS53_09430"
     CDS             5548..6075
                     /locus_tag="VIS53_09430"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEY5768042.1"
                     /translation="MPKHLVISTSGNPDSNSRRMGRKAFAHLQKQKIDCDWIDIREME
                     LPLCDADKCYGMPGSKKLSARIEGADGIIIAAPVYNYDVAATTKNMIELTGSAWENKI
                     VGFLCAAGGMGSYMSVMAYANSLMLDFRCVIIPRFVFATGEGFDGDNIIDKKVVRRIE
                     TLADELVRFTKALRG"
     gene            6190..>7453
                     /locus_tag="VIS53_09435"
     CDS             6190..>7453
                     /locus_tag="VIS53_09435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768043.1"
                     /translation="MKHFLLACFIPMTLTAQNMQELTEQLGKTVLYGDVALSPDGSHL
                     AWVQSTAASTSKQTYIRETSGNGPAKLATLPITGERTDFDLAWSPDSKILAFFSSTGE
                     RDQRQLWTVKSDASEAKKITKLSGYAARPRWSHDGKQIAFLYIEGAGGGGPLVAAPAT
                     TGVIDTAIHNQRIAVLDPVTGELRQVSPPDLHVYDYDWSPDDKMFVATAAPGPGDNNW
                     WIAQIYTINSAKGNATSIYKPWFQVAVPRWSPDGKSIAFIEGLMSDEGFHGGDLFTMS
                     ADGHDVTNRTSSRKASANSFFWQTPGRILLVEYVGGGSAMSELSLTNNSAQTIWKGPE
                     GIHAFGNFPDFSLSSDGKLAAAELSSYNSPPEVFAGPLGKWSQLTKNNAGLQANWGKA
                     ESIEWTNEGSNIQGWLVPPSKIEPGKKYP"
BASE COUNT         1744 a         2036 c         1991 g         1682 t
ORIGIN      
        1 ccgcgcttac cgcaatcgtg cacacccccg cgcaacttta cctcgctcgt tttttgttag
       61 gcgcagctga agccgggttc ttcccaagcg tcatcgttta tttgagcaac tggttcattc
      121 aggaggaccg ggcgaaagcg acgagcaact tcatggctgc aattcctgta tcactgatca
      181 tcggatcccc tgtggcgggc tggctgcttg gtcacaactg gttcgcggtc gaaggctggc
      241 gctggctttt ctttgtggaa ggtcttcccg ccatcttgtt aggcgctctt gcatttttct
      301 tcctgacaga caagccgaga caggcgcgct ggctaactgg cgagcagcgg caatggattt
      361 cgcaaaagtt ggaacaagaa aagccgttgc cccggcaatc gacaagcatc ggtcaggcac
      421 tccgttctcg cactgtgctc ctgctcgcca ccgcagcctt ccttcaatat ttcattggat
      481 acagtgtgat tttttggttg ccgactattc tcaaaaaaca atccggattt tcggatctgc
      541 aggttggcct gtttggcgct gtgccctacg ttgtggcgct cttcgcgatg ttgttcaatg
      601 gatggcattc cgacaaaggt cgcgaaagac gctggcacgc tgcggctcca ctcttgatcg
      661 ccgcaaccgg attgctgtgc ctcatcagtt tgcccagctc gaatgtaatg acggttttac
      721 tattgagcgt catctgcatg gccatggcat ttctgcccgt gttctgggcg attccaacgg
      781 aaatcctcac tggctcgaac gcggcagttg cggtgggaac gatcaacgcg ctcgccagcc
      841 tcgcaggttt tgcaggaccg tacgcgttcg gatatctccg cgctgaaacc ggatctttcg
      901 tcgccggatt cttcgccttg atgttttgtg caattgcagc cgggattctc atgctactga
      961 caccagccgc ccagccgcac ggtaccagat ctatgacatc gagctaaccg ctgccgggca
     1021 aattcagttt cgctttaatt ctctcgacaa tctcctccgg cgttcgtccc aattcgaccg
     1081 ttaccacgtt ctcgtccggc tgtggttcct ccaagtcatc gaactgactc tgcaacaagt
     1141 tcctatccat aaaatgccga tgccggctgt gcagtcgcct ttcgacgagc gcatagtcac
     1201 cgcgaagaaa cacaaacttt gtttcatcgc cgatgcgcag acaatcgcgg taaacacgct
     1261 ttaacgccga acaggccacg acggcatttt ctccggcgaa aagcgatcgc tcgatctgct
     1321 gccgcaactg ttccagccac ggccgtcgat cttcatccgt cagtggatgg ccgctgcgca
     1381 tcttctcgat atttgcggcg ggatgaaaat cgtcggcttc aataaaacgc cagccgagtt
     1441 cgcgcgccag caacttgccg accgttgttt tgccggcgcc agagactccg aagatgatta
     1501 tcatcatggc gcattaattt ttcgccgact gccaatcttt tccacggcga acgcgataag
     1561 aacaaagagc gtgtagaaga cccagacacc cgtcaccgta gctttatccg tcagtggcgt
     1621 gcgcggcacg tacgtatcgc cgatctgaac aatgacgaga acaagcccga acgcgatcac
     1681 agctcccttg cgaattgccg gcatcctatt tcgcgcaagg taaagaacga tcccgccggc
     1741 gagtagcgcg atctccaacg caaactccgg gtcgcgataa ttccacaaac caaacccgac
     1801 cttccatcgg ttatcgtaga tcgcgaggtc gcgcgggtgc gcaatgagat cgagaatcca
     1861 gtgcgagaaa actgccaggc cgacgatcaa aggcgcagac ttactgtagt ggctaagcct
     1921 gccctgagcg gagtcgaatg ggtgccggtt gcagaccgtc ttataaacga atgctgccac
     1981 tgctgaccaa atcaccgcca tgatcaaact gtgtgaatat gggtgggaat acgaatcgag
     2041 catgctgcct gccgtgaagc ctttgatcac gcgcagcttc tcaatcccga gcaaaaccaa
     2101 cgtggcccag atgtaatcga gaaactgaac cgccacgaac aatacccaca gcgggatttt
     2161 gtttcgttcc gttctgcacg caaaagcaac gctgtaatgt ccgacaaaca tgtacgctca
     2221 tgaattgtag ggcgtttgtg tcaaacgcca atgccaggcg tcatatcgcg aggaatccgc
     2281 aattcattgt agggcgtttc tgtgaaacgc ctcggttggc gtctgacaca gacgccctac
     2341 aaaaagaagt gcctgctagt tggtcattgc tgatcgagtt tgcttccttc acgatttcct
     2401 catgaagcgt cttcgtttgg tatccatgtt aggcagtccc actccggctg tcggctcccc
     2461 cgtcacgccc gcaatgttga atggttcgag cagtaggaga cgcaatcttt gcctgctcct
     2521 tctcgttttg gctttaccgg cttttgctgc ggatcgaact gaagaagtgc gcgccaccga
     2581 gatcgcattc gccaaagcgt tcgcagatcg cgacgcgaaa aagtttttct cgtatctcac
     2641 cgatgacgct cagtttctcg gaagacgcaa tactatgcgc ggaaagcaag aagtgatcgc
     2701 gggctggtcg gaattcttca aaccagcagt cgcacctttc cgctggcagc ccgagcgcgt
     2761 cgtaacaaac gcggctggcg acctgggatt ctccagcggt cccgttttcg atgaagcagg
     2821 agtgcagatc ggcaccttta cttccacctg ggtaagacag ccggatggct catggaaaat
     2881 cctcttcgac ggaggctctg cttgtccgac gacgaagtaa cccgcagagt agctggtatc
     2941 ctgtcgatcg aacgatcgag aaacattcta actcggcagg agaaacgaaa tgattgtgtc
     3001 tttcgctcga taattcgacc agaacgtttc gccgtcgaaa gtcagtgagc gagacgcgaa
     3061 tgggacaacg gctatatctt cagcgatcgg cgtttcctct tgcggattca gtcgcgcgat
     3121 tcgccaatct tcgtttgggt gttcctgtcc tcgcaaaacg taaagcgaac cgttggcgaa
     3181 agtgtgcccg cagatttctg cgccaacgtt aatctcgcgg attacattcc ctgtatggtc
     3241 gaactgcagc aaccgcttct tgtaccactg gctcatgtac agattcctcc cgtcgaagct
     3301 gaggtatgat cccgtgaatt cggggcacgc gaacatcttc gaaaatccgg cgtcaggtgt
     3361 atagcgataa atataccgat catcgtccga gccttcgccg atggtaaaac gcagttcgcc
     3421 gtttagcgca acggcagccc aaggaatgcc gggcgcttcc tgttgtttca agacgattcc
     3481 attctccgga tcgatcgcat agatgcggcg cagatcgcgc gaaccgaccc acaacttgtt
     3541 gttccgtctg tcccaggcca gcgcctgcgg tgtggtcgcg ggcgaagcaa gccggcgttt
     3601 ctcgatgatt tgttccgtca ctttgaaact ctaccttcga aatgaaggtc cgttgatttc
     3661 caaatcgtgc aacaacgagc gagtaacaag cttgatcgca gaatggcagt ttgtcacact
     3721 cgctacagcg aagattatga aaatacgaac cttcctgttg tgcttcgcag ctgcgacaat
     3781 tggaacgtca tccgccgata gggataagag tgtcacggcc gctcaagtca acggcacctg
     3841 gaaaaccaaa ggcggcgaat tcaagatctg ggcgctcggt aaacagcgtc tccaagtgga
     3901 attttcgggc gtttacgaat acaaaacgcc gcagggccca atggcaaacg agggcgaagg
     3961 cagcgggatc gcgacgatcg aaggcgacac tgccatcctc aaacccgaag gctcggacga
     4021 ggagtgccag atcaccctaa aattcgtcgg cagcaaactg gtcgtcacgc aaacgggtat
     4081 ttgcggcttt ggccacaacg tgagcgccga aggcacctac gaaaaagttt cgtccaagaa
     4141 gccaaagttc ggatcagatt gagctcgggc ccagctgctc gcgaccttgc tgtagttacc
     4201 gattcgccac agcaggaatc ctgctggtgt gcggacctgt ggccggttcc aagaagttcg
     4261 taactccgta gacggctcgc aaacgctacg aaatgcaggg gaagctgtca gcttccccta
     4321 cagcgtcacc ttttgcacag agccagatcg gttatatgtg acaagattat gccgcgttgt
     4381 gcctgggcca cgactgaact ggccatgagt tatcatgaca acgaatgggg agttcctgtg
     4441 cacgacgatc gagtgctctt cgagttcctt attctggaag gcgcacaggc gggattgagc
     4501 tggaacacga ttttgaaaaa acgcgagaac taccgaaacg cattcgatga atttcgcccc
     4561 gaaaagatcg cccgctacgg caagcgagac gtgcagcggt tgctccgcaa cgatgggatc
     4621 gtgcgtaacc gcttgaaaat cgcagccaca atcgagaacg cgaaaaagtt tctcgcggtt
     4681 aaaaatgaat tcggaagttt cgacgcgtat ctctggagct ttgttaacgg caagccaatt
     4741 cagaatcgtt ggcgaacatt ggctgacgta cccgcacgca ctgccgaatc cgacgctatg
     4801 agccgcgatc tgttgcgacg cggattcaag ttcgtcggct caacgatttg ctacgccttt
     4861 atgcaagcaa tcggcatggt caacgatcat ctcgttacct gtccgcgata cgttgagctc
     4921 ggcggctcgc gtcgcaggtc gaagcagcgc tagcgaatct gtgttaatct gcgcaatctg
     4981 cgaatttaaa gtccggccct tatgaaaagc gacaaggaca agatcgacat aagcgcggtc
     5041 gaagatcatg acggaatact aaccattcgc ggtggcggcg cgcgacgcga ttggaatggc
     5101 atccattaca aacagggcat gtcaggtaag aacgtgggaa caacaagcct gtcggccaat
     5161 atcgccacta ttccgccggg cggcgtcgcc tatgcgcaca tccatgtcgg cttcgaagta
     5221 attctctata tcatcgaagg aaaagtgcgg cacgaattcg gaccaggcct gaaacaagtg
     5281 atcgaaaacg aggccggcga tttcatctat atcaagcccg gcgtgccgca tgaagtgttc
     5341 aacatgagcg ataccaagcc ggtggtcgca ttcgtcgccc gctcgtcggc tgacgaatgg
     5401 gacaacatta ttccttacga gcgccatcag cggtaatgta gcgcgagcct cccggcttgc
     5461 gcagctggga ccttcgcaag cgaggacgct cgcgctactt ccggcgttcg atgttgagcg
     5521 ttcggcgttt gcttctagca ttgcttaatg ccgaagcatc ttgtgatcag caccagcggt
     5581 aatccggaca gcaacagccg gcggatgggt cggaaagcgt ttgcgcatct gcaaaagcag
     5641 aaaatcgatt gtgattggat cgacatccgc gaaatggaac tgccgctgtg cgatgcggac
     5701 aaatgttacg gcatgccagg ttcaaagaaa ctcagtgcta ggattgaagg cgccgatgga
     5761 ataatcatcg ctgcgcctgt ctataattac gatgttgccg cgacaaccaa gaacatgatc
     5821 gagctaaccg gtagcgcgtg ggaaaacaag atcgtcggct ttctttgcgc cgcaggcggg
     5881 atgggcagtt atatgtcggt gatggcatac gcaaacagtc taatgctgga ctttcgttgc
     5941 gtgattattc cccggtttgt gttcgccacc ggtgagggtt tcgatggcga caacatcatc
     6001 gataagaaag ttgtccggcg catcgaaact ttggcagacg aactggtccg gttcaccaag
     6061 gcgcttcgcg gctgagattt cacgcgagat tttctaacca ctaatggaca cgaatagaca
     6121 cgaatctggt tctcctcatt ggtgttcatt agtgttcatt cgtggttaaa tctttgtcag
     6181 gatcacaaga tgaagcattt tcttttggcc tgtttcattc ccatgacatt aacagctcaa
     6241 aatatgcagg agttgacgga acaactgggc aagactgttt tgtacggcga cgtcgctctt
     6301 tctcccgatg gatcgcattt ggcatgggtg caatccaccg ccgcatcaac atcgaaacag
     6361 acgtatatcc gcgaaacttc cggaaacggg ccggccaaac tcgctacgct tccgataacc
     6421 ggtgagagga ctgatttcga tctcgcgtgg tccccggatt cgaagatcct ggcatttttc
     6481 tccagcaccg gcgaaagaga ccagcggcaa ctctggaccg tgaagagtga tgcctccgaa
     6541 gcgaagaaaa ttacgaaact cagcggatac gctgcgcgtc cacgttggtc gcacgatggc
     6601 aaacaaattg cgtttctcta catcgaaggc gcgggcggcg gcggtccatt agtggccgcg
     6661 cctgcgacaa ccggcgtgat cgacactgcc attcacaatc agcgcattgc tgttctcgat
     6721 cccgtgactg gcgaactgcg ccaagtgtcc ccgccagatc ttcacgttta cgattacgat
     6781 tggtcgcccg acgacaaaat gtttgttgcg acggccgcgc ccggcccggg cgacaacaat
     6841 tggtggatcg cgcagattta cacgatcaac agcgcgaaag gtaacgcgac atcaatctac
     6901 aaaccctggt ttcaagtcgc cgttccgcgt tggtcgccgg atggtaaatc gatcgcgttt
     6961 attgaaggtt tgatgagcga cgaaggattt catggtggtg accttttcac tatgagtgcc
     7021 gacggtcacg atgtcacgaa tcgcacgtcg agccgaaaag cttcggcaaa ttcattcttc
     7081 tggcagacac ccggtcgcat tctgctcgtc gagtacgtgg gtggcggcag cgcgatgtcc
     7141 gaattgagcc tgaccaataa ttcagcgcag acaatctgga aaggacctga aggcattcac
     7201 gcgtttggaa attttcccga cttctcgcta tctagcgacg gcaagctcgc ggccgcggaa
     7261 cttagcagtt acaactcgcc acccgaagtt tttgccggtc cacttggcaa gtggagccaa
     7321 ctcacgaaga acaacgctgg tttgcaggcg aactggggca aagcggaaag catcgagtgg
     7381 acgaacgaag ggtctaacat tcagggctgg ctagtgccgc cgtcgaaaat cgagcccggc
     7441 aaaaaatatc cga
//
LOCUS       DATDAJ010000377         5995 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2100008, whole genome shotgun sequence.
ACCESSION   DATDAJ010000377 DATDAJ010000000
VERSION     DATDAJ010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5995
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2100008"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VIS53_09440"
     CDS             <1..658
                     /locus_tag="VIS53_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY5768044.1"
                     /translation="EGVWPKVVLPMIASPVAGFVFGALFMFLLLVALHRLTPQFVHSL
                     FGKLQIFSAAWMAHSHGTNDAQKTMGIITLALFTGTKAGTFDNWPQWLDFLKTPSFVL
                     PNWVIALCAVTMAAGTAAGGWRIIRTLGHRVVKLQPVHGFAAETTAALIIQAASYYGI
                     PLSTTHVISTSIMGVGAVKRFTGIRWTVVERIVWAWVFTLPATALIGYILERAIGAHH
                     "
     gene            764..2161
                     /locus_tag="VIS53_09445"
     CDS             764..2161
                     /locus_tag="VIS53_09445"
                     /inference="COORDINATES: protein motif:HMM:NF019042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY5768045.1"
                     /translation="MSITECFVQNRVLFSVVLATALHPLAMDAASESDRLERLERAVE
                     QLQKRNAELEAEVRNLKNQTAAVPGGKFKTKVIHDGKTYVEKAVPEDEKLPLYVQQRG
                     PELKLMLGGFVQMNFEDGDVSAFEGRFGQTALKDRFRLRRARINLTGDFAEQFDFKVE
                     GDFGQSDGISGNRTAFSATDIWVNWHQFPVAQVKVGQYKAPFGLEQLTPDTTLLTIER
                     TLPTGAITPDRQIGIELWGKPFATIWPAQADLLTYYAGIFNGNGRNITNNDNNNFMYV
                     GRLESTLLKDVFGKGSFLKLGADVLNSRDDQGTNISQSLTLLVNSDGSLSPFVLPGPD
                     ERTAWSVDAWLRMGPFDLIAEFLQEHVDPRTVNGVPPGFEEFTTDGFYVTGAYYLIPK
                     KLQAVVQWQHLNPGQKGNDGISSIVAGLNYYIRGDDLKLMINYFHTWSDFRDANPDFG
                     DDQFDEVIGRMQLMF"
     gene            2179..2850
                     /gene="phoU"
                     /locus_tag="VIS53_09450"
     CDS             2179..2850
                     /gene="phoU"
                     /locus_tag="VIS53_09450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEY5768046.1"
                     /translation="MITSKHILGTFDEALSDLRNDLLRMAGLTERSLYHAINGLLQRD
                     DDLCIRAIADDEEVDQLEKQVDKIGVEILLRYQPVASDLRHVVSAMKLSPNIERVADE
                     ATNIAECARKLNRHPPLAEVNLIAPMQAHAISMFKDGIDAFAREDVDMARAIVSRDKQ
                     LDDMNASANRQLTERMMQDRDQLRGYLNLILISRCLERVGDHATNIAEDAVYAAAAED
                     IRHQT"
     gene            3060..4016
                     /locus_tag="VIS53_09455"
     CDS             3060..4016
                     /locus_tag="VIS53_09455"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY5768047.1"
                     /translation="MRRRSLGNSGLEVAPLAFGGNVFGWTVDERTSFRLLDAFVAFGF
                     NLIDTADVYSRFAPGNRGGESETIIGKWLKQGGRRDKVIIATKVGLEMGLRRKGLSSA
                     YIVRATEDSLRRLQTDYIDLYQSHRDDPDTSLDETLQAYAQLMEQGKVRAIGASNYNA
                     ERLAHALAQSRRHGLPRYECLQMEYNLYDRAEYEETLEPVCIENGLGVLSYFSLASGF
                     LTGKYKSVADIANKARGGFVKKYLNERGFKILDALDQVAKRLHGTPARVALAWLIARP
                     TITAPIVSATSLTQLKELIGGTKLKLDEGSMGLLNEASDGLR"
     gene            4126..4818
                     /locus_tag="VIS53_09460"
     CDS             4126..4818
                     /locus_tag="VIS53_09460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768048.1"
                     /translation="MNDGDDSPTRVIFLFDIDNTLLDNDRVAADLQHHLVSEVGAEGA
                     QEYWRLFEQLRTELGYADYLGALQRYRAKHPRAPHLVCVSDFFINYPFAERLFPDAIK
                     VIEHVRQWGPAVILSDGDVVFQPLKVSHSGLTNAVAGRVLIYVHKEQELDDVEQRYPA
                     EHYVLVDDKLRILAAVKKFWGARVTTIFVRQGHYAADPKILASYPAADISIELIGDLL
                     QYRLPELLKPKS"
     gene            5021..5488
                     /locus_tag="VIS53_09465"
     CDS             5021..5488
                     /locus_tag="VIS53_09465"
                     /inference="COORDINATES: protein motif:HMM:NF028108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5069 domain-containing protein"
                     /protein_id="HEY5768049.1"
                     /translation="MTTENREKVKLLSRDLRDGKEFPRSPRATLAGYVLAARAVDKCR
                     AVLLDWQGEYHSNCPLDQRWLNFAEIHYGDFRSQVASGATDNEIAAWIEKNAKKRPRA
                     EIVAWNNKERDLRLSDLPPELQEYMENYIHQYVPRNRVVYHWFDVYDLEEQRI"
     gene            complement(5580..>5995)
                     /locus_tag="VIS53_09470"
     CDS             complement(5580..>5995)
                     /locus_tag="VIS53_09470"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY5768050.1"
                     /translation="GVNNFQQDVIAGKHHLVADEPVSVGGGDAGPDPYDYLLAALGVC
                     TSMTIGFYARRNHLLLENVTVSLWHSRIHSRDCEECETKEGMIDRIDVEVELTGSLTA
                     EQHAKLMEIGAKCPVHRTLTSEINIRLRSAEKPSV"
BASE COUNT         1444 a         1547 c         1651 g         1353 t
ORIGIN      
        1 cgaaggtgta tggccgaagg ttgtgctgcc gatgatcgcg tcgccagttg ctggcttcgt
       61 gttcggcgcg ctcttcatgt ttttgttgct tgtcgcactg catcgcttga cgccacaatt
      121 tgttcattcg ctgtttggaa aactgcaaat cttcagcgcc gcctggatgg cgcacagcca
      181 cggcacaaac gatgcacaga aaacgatggg catcatcact ttggcgctgt ttaccggtac
      241 aaaggcgggc acctttgata attggccgca atggctcgat tttctaaaaa cgccatcatt
      301 tgtgctccca aactgggtga tcgctttatg cgcggtgacg atggcggcgg gaacggccgc
      361 tgggggttgg cgcatcattc gcacgctcgg tcatcgggtg gtgaagttgc agccggtaca
      421 tggcttcgcg gccgaaacca ctgccgcctt aatcattcaa gccgcgagct actacggcat
      481 tccactgtcg accacacatg taatttccac gtcgatcatg ggtgtcggag cagtaaaacg
      541 tttcactgga atccgatgga cagtggtaga acgaattgtt tgggcatggg ttttcactct
      601 ccccgcgaca gcgctgatcg gttacatcct cgagcgcgca attggagcgc atcactgatc
      661 cagtcacgta agcgaagact gaaagaaccc gagcaatttt cagggtccga gggagccagg
      721 tgcaaagtgt cgcgctgacg cgcaacaaac aggagataca aatatgtcga taacggaatg
      781 ttttgtgcaa aaccgtgttc ttttttcggt agtgctggcg acggcgcttc acccgctagc
      841 tatggacgct gcttccgagt ccgatcgact ggagaggctc gaacgcgcgg tagagcaatt
      901 gcaaaagcgc aacgccgaac ttgaagccga agtccggaac ttgaaaaacc aaactgcggc
      961 tgtgccgggc ggcaaattca aaaccaaggt gattcacgat ggaaaaacgt atgtcgagaa
     1021 agctgtcccc gaagatgaaa aattgccact gtacgtgcag cagcgcggac cggaattgaa
     1081 gctgatgctg ggcggattcg tccaaatgaa ttttgaggac ggcgatgtgt ccgcgttcga
     1141 aggacgcttt ggtcagaccg cgttgaagga tcgcttccgt ctgcgccgcg cacgaatcaa
     1201 tctcaccggc gattttgccg agcaattcga tttcaaagtg gaaggcgatt ttggccagag
     1261 cgatggcatt tcgggcaacc ggaccgcgtt ttccgcaacg gacatttggg tcaactggca
     1321 tcaattccct gtggctcaag tgaaagtcgg ccagtataaa gcgccatttg gcctcgagca
     1381 gctgacgcct gatactaccc tgctcacgat tgaacgcacg ttgccaaccg gcgcaatcac
     1441 cccagatcgg caaatcggta tcgaactttg gggaaaaccg ttcgcgacaa tctggcctgc
     1501 ccaggcagat ctgctgacct actacgctgg cattttcaat ggcaacgggc ggaacatcac
     1561 caataacgat aacaacaatt ttatgtatgt aggcagactg gaatccacgt tgttgaagga
     1621 cgtttttgga aagggttcgt tcctcaaact tggcgccgac gttctgaaca gtcgcgatga
     1681 ccagggaacg aatatctcac aaagcttgac tctattggtc aactccgacg gctcgctttc
     1741 gccattcgtt ctgcctgggc ccgatgagcg aaccgcatgg agcgtcgacg cctggctcag
     1801 gatgggtcca tttgatctaa ttgccgaatt ccttcaagaa catgttgatc cgcgtaccgt
     1861 gaatggagtg cctccgggct tcgaggaatt cacgacagac gggttttatg ttaccggcgc
     1921 ttattacctg atcccgaaaa agctgcaggc tgtcgttcaa tggcagcact taaacccggg
     1981 gcaaaagggt aacgacggta tctcatcaat cgtcgccgga ctcaattact acattcgcgg
     2041 ggatgatctc aaactaatga tcaattactt tcatacgtgg tcggatttcc gcgacgcaaa
     2101 tcctgacttt ggcgacgatc aattcgacga agtgattgga cgtatgcagc taatgtttta
     2161 agccgtgtaa aaataacagt gatcacatcg aagcatatcc ttggaacatt cgatgaagcg
     2221 ctgagcgatc tccgaaacga tctgctcagg atggcgggac taactgaacg cagcctttat
     2281 catgccatta atggattgct tcagcgggat gatgatcttt gcataagagc catcgccgac
     2341 gacgaggaag ttgatcaact agagaagcaa gttgataaga tcggtgtcga aattttgctt
     2401 cgctatcagc cggtggcgtc ggatctacgg cacgtggttt cggcaatgaa actttcgccc
     2461 aacatcgagc gcgtagccga tgaagcgaca aatatcgctg aatgtgcgcg caagttgaac
     2521 cgacatccgc ccctggctga agtgaatttg atcgcgccaa tgcaggcgca cgcaatatcg
     2581 atgttcaagg acggcatcga cgcgtttgca cgagaagatg tcgatatggc gcgggcgatc
     2641 gtcagccgcg acaagcaact cgacgacatg aatgcctctg caaaccggca gctgaccgaa
     2701 cggatgatgc aggaccgcga tcagttgcgt ggatatctga acctgatctt aatctcccgc
     2761 tgtctcgaac gcgtgggtga ccacgcgacc aacatcgccg aagacgccgt ttacgccgcg
     2821 gcagcggagg acatcaggca ccaaacctga cgactattcc ttttcgaccg acacggaagg
     2881 tcgctttcat taccgtgaaa acgttgtcgc cttctttcag attcattcgc tccactgtgg
     2941 gtagagcagc ttttgtcgca gcgcgtacct gcttatggaa aaaacccaac caaacgcagt
     3001 tgcgccggcg ttttgatcag gatactcgcg cgattcggac attgcggccc cccaaaaaaa
     3061 tgagaagacg cagcttgggt aactcagggt tggaggtagc gccgctggcg ttcggcggga
     3121 acgtcttcgg ctggacggtg gatgagcgga cgtccttcag attgctcgac gctttcgtcg
     3181 ccttcggatt taatcttatc gacactgctg acgtttattc cagattcgcg ccgggcaatc
     3241 gtgggggtga atcggaaact ataatcggca agtggctcaa gcagggtggc agacgcgaca
     3301 aagtcatcat cgccacaaaa gtcgggctcg aaatgggtct gcgcaggaaa ggtctttcaa
     3361 gtgcttacat cgtgcgtgcg acggaagact cgttgaggcg gctgcagacg gactacatcg
     3421 atctttatca atcgcaccgt gacgatcccg acacttctct ggatgagacg ctgcaagctt
     3481 acgcgcagtt gatggagcag gggaaggtgc gcgcaatcgg tgcatccaat tacaacgccg
     3541 aacggctcgc ccatgcactg gcacagagca gaaggcatgg attgccaagg tatgaatgcc
     3601 tccagatgga atataatctc tacgatcgcg cggagtacga ggaaacactc gaaccggtat
     3661 gcatcgaaaa cggtttggga gtgcttagct atttctcgct ggcgagcgga ttcctcacag
     3721 gcaaatataa gtctgtggcc gacattgcga acaaggcgcg aggcggtttc gtgaaaaaat
     3781 atctgaatga gcgcggcttt aagattcttg acgcgctgga tcaggtggcg aagcggcttc
     3841 atggaacacc tgcgcgggtc gcgctggcgt ggctgatcgc gcggccaaca atcaccgcgc
     3901 ccatcgttag cgccacaagt cttacgcaat tgaaggagct gatcggcggg accaagctca
     3961 aattagacga agggtcaatg gggcttctga acgaggcgag cgatgggcta agataacaca
     4021 gccataatgg ctgtacttcg cggagcttgt tgcccgcaga ttgcatttct gcgtggccac
     4081 acgaggcatt tcggcgatta aaggcacagc ggttggtacc gaaaaatgaa cgacggcgac
     4141 gattctccta ctcgggttat cttcttgttc gacatagaca acacgctgtt agataacgat
     4201 agagtcgcag cagatctgca acaccatctg gtcagcgagg tcggtgcgga gggcgcgcaa
     4261 gaatactggc ggcttttcga gcaattgcgg accgaactgg gctatgcgga ttacctcggc
     4321 gcgttgcaaa gatatcgggc caaacatccg cgagccccgc atctcgtgtg tgtgtctgat
     4381 tttttcatca actatccttt cgctgagcgt ctgtttcctg acgcgatcaa ggtgattgag
     4441 cacgtccggc aatggggtcc tgcggtcatt ctctcggacg gcgacgtcgt tttccaaccg
     4501 cttaaggtca gtcactcagg attgaccaat gccgtcgctg ggcgtgtgtt gatttacgtc
     4561 cacaaggagc aggaactcga cgacgtcgag caacgctacc cggccgaaca ctacgtgcta
     4621 gtggacgaca aattacgtat cctggccgcc gtgaaaaaat tctggggcgc gcgtgtgact
     4681 accatcttcg ttaggcaagg tcactatgcc gccgatccga aaatcctcgc cagctatccg
     4741 gcagcggata tcagcatcga acttattggc gatctgctgc aatatcgtct gccggaattg
     4801 ctgaaaccga aatcgtgagc gatcagcgat cggtctttga aagctcaccc gaacaagaca
     4861 gcgtaattac ttggtgaaca tgcccgatcc cataacgcaa cgtactggcg actctgtgga
     4921 cacctgatta tccctcctat tgcgattaag caatggagtg gcgacatcaa atcctgggac
     4981 ctattttatt atctgaatgt aaaaaccaga gaaacagaag atgacgactg agaaccgcga
     5041 aaaagtgaaa ctgctctcgc gtgatttgcg ggatggaaaa gaattcccgc gcagcccgcg
     5101 agctacgctg gctggctatg tgctggctgc gcgcgcggtc gataaatgcc gcgcagtgct
     5161 tctggattgg caaggcgaat accattccaa ttgcccgctc gatcagcgct ggctgaattt
     5221 tgccgagatt cattatggcg atttccgttc gcaggtcgcc agcggtgcga ccgacaatga
     5281 gattgctgcg tggattgaga aaaatgcaaa gaagcgtccg cgtgccgaga tcgttgcctg
     5341 gaacaacaag gaacgcgacc tgcgtctcag tgatttgcct cccgagcttc aggaatacat
     5401 ggagaattac atccatcaat atgttccacg taaccgcgtc gtatatcact ggttcgacgt
     5461 gtacgatctg gaagagcaac gaatctaaaa taagcgctgt agccacggcc gtctgggccg
     5521 tcttctagga cactgttaga ggatgaccgg ccataggccg gtggctacaa tgctttttgt
     5581 cagacggacg gcttctccgc agatcgcaat ctgatgttaa tctcggacgt gagtgtccga
     5641 tgaacggggc attttgcacc gatctccatc agcttcgcgt gttgttcggc agtcaaagat
     5701 cctgtcagtt ccacttcaac atcgattctg tcgatcatgc cttccttggt ttcgcactcc
     5761 tcacaatctc ttgagtgaat gcgcgaatgc cacagcgaaa ctgtgacgtt ttctagcagc
     5821 aaatgatttc gccgcgcgta gaagccgatt gtcattgaag tgcacacgcc aagtgccgcg
     5881 agcaaataat cgtagggatc cggtccggca tcgccgccgc caacgcttac cggttcatca
     5941 gcgacgaggt gatgtttacc cgcaatgaca tcctgctgaa aattgttaac gccgc
//
LOCUS       DATDAJ010000378        10655 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2106701, whole genome shotgun sequence.
ACCESSION   DATDAJ010000378 DATDAJ010000000
VERSION     DATDAJ010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 10655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10655
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2106701"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..305)
                     /locus_tag="VIS53_09475"
     CDS             complement(<1..305)
                     /locus_tag="VIS53_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768051.1"
                     /translation="MHEITRRMFTPRGRALIFAVVLAAVTILAYRPAWHGGFLWDDDA
                     YIINNELLTAPDGWQRIWFSLDSPSQYFPFTYSTFRIEHALWGLNTTGYHWVNLLLHV
                     "
     gene            438..2072
                     /locus_tag="VIS53_09480"
     CDS             438..2072
                     /locus_tag="VIS53_09480"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5768052.1"
                     /translation="MLRKTDINGKLVQFAWWALATIVFALVLAIRIRLFGIPLERDEG
                     EYAYAGQLILQGIPPYKLAYNMKFPGTYAAYALIMSIFGQTINAIHLGLLLINVATIA
                     LIFLLGRRLINTMAGVTAAASYAVLSVSPSVLGLAAHATNFVVLPVLGGILLLLKKQR
                     VTASEPSQPKQLARLFASGLLFGIGALMKQPGLLFIPFGAIYIVWNDLNRRRSLNKTL
                     LRILIFVTGAAVPLGVTSLILWYAGVFDKFWFWTMNYAWQYGSVVPLSQAPQIFSGSA
                     NEVVLTAWPIWILAGIGALTGFRDQRRRTSILFLIGFLFFSALAVCPGFYFRTHYFIL
                     VLPAVSLLAGAALSKLTEILEGRTILVRIVPLFLFAVALSVPILLDKKIFFELSPNQA
                     CGLIYPDNPFLESVRIGTYMREHTEPGDTIAVLGSEPEIYFYSHRHSATGYIYTYGLM
                     ESQKYAQHMQQEMISEIEAARPKYLISVAMNYSWLRRPDSAETIFNWANQYVAQNYTA
                     AGFVNITPTKTDYFFGDVPQSVETLKNYILIYRRNL"
     gene            2155..4011
                     /locus_tag="VIS53_09485"
     CDS             2155..4011
                     /locus_tag="VIS53_09485"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5768053.1"
                     /translation="MTACICVCLFVLTWIVFCQTFRYDFVNYDDPRYVYQNTRITSGI
                     SVANVAWAFSHIHSENWHPLTTITHMLDCQLHGVNAGWHHFTNVLLHSCAVVLLFVAL
                     ERMTGALWRSAFVSVVFAVHPLHVESVAWIAERKDVLSAFFFMLTLLAYLRYTRAPSI
                     GRYLTVALVVGLGLMSKPMLVTLPFVLLLLDYWPLERIEAKRANTGRRLLQLVLEKIP
                     LITLSAVSSMVTFLAQRGAIGWTEQLPVPTRISNALVAYVIYIRQMFWPTRLAVFYPH
                     PENRLPALEISLALIVLVGITAIAFIFRRKAPYFVTGWLWYLGMLVPVIGLVQVGWQG
                     HADRYTYLPQIGLYIAVTWAVTDLTHSWRFQRIALGTAAVVVLGALTWSSRLQTSYWR
                     DSETLFTHALAVTSNNDVALNNLGIIFLEKGQLDDAISKLQAAIDLRPENAPAHDNLA
                     KALLKKGQVAEAMVHYRKFLELEPVNVEARNTLGTALIQQGHLREAIDQWQQALALQP
                     ENGNAASNLAWVFATCTDESIRDGTRAAELGEKALRISGGKIPMIHKVLAAAYAESGR
                     FADAVETAQRGAELAASQGNPALAAELESNIALYQYGRPLRDPSITNGSSSP"
     gene            4103..6079
                     /locus_tag="VIS53_09490"
     CDS             4103..6079
                     /locus_tag="VIS53_09490"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5768054.1"
                     /translation="MKSPVTDLLVCLGLVAVTWAVFGQTLTHDFVNFDDHVYVYENPL
                     VIRGLSTEGIIDAFTHTHARNWHPVTTVSHMLDCQLYGLNAGGHHFTNVILHTISVLL
                     LFLMLKQMTGGLWQSAFVAVLFAIHPLHVESVAWIAERKDVLSAVFFMLTLAAYTRYA
                     RAPSAPRYLLVALLFAFGLMSKPMLVTVPFVLLLLDYWPLGRIGSQKSEVGSRVRRLI
                     TEKLPLFVLSALSCIATLLTQRQGPNAIDQLPFLWRLNNTFVSYVTYISQMLWPARLA
                     VFYSHPNDRLPFVEVTMAIAFLVGISLLVIYLRRTKPYLFTGWFWYLGMLVPVIGFVQ
                     VGEQAHADRYTYLPQIGLYIMIAWTVGDLVLESTSRVRRAVVGVAAAIAIVCVGVRAF
                     VQVSYWKNSETLWSHTLAVTSDNDVAHNNLGFLFLRKGELDKAISQFQAALDIRSRNS
                     ETHYSLGAALVQNNLGNAFARKQLWDEAIDHLQEAINLRPDYADAYFNLGSVLFHQSR
                     IDEAIAQWQKALAIRPRDVEAHRNVASALRKQGNVKGAIAQYEQALNITPEDSVALNN
                     LAWILATSSDASARDGARAVTLALKAVQASGGRDANFGRTLAAARAEAGQFAEAVATA
                     EAAKALASTQSKPELASRLEEEIALYRSRVALRE"
     gene            complement(6117..8375)
                     /locus_tag="VIS53_09495"
     CDS             complement(6117..8375)
                     /locus_tag="VIS53_09495"
                     /inference="COORDINATES: protein motif:HMM:NF024821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5768055.1"
                     /translation="MPVREIRVPFWRREWFWALLLIAFIFIAYAQVFRARFIWDDESH
                     LTQNPCVVGPLGLKEIWTTTQAVYYPLVLTTFWALHKFVDLNPLPYHALNVLLHAVSA
                     ILLWRGLRRLQVRGAWLGAALWALHPVMVQSVAWVTELKNTQSCVFYLLSILFFLKWE
                     DQGGPVSRPLQRWTGDRRSLIFALSLLFFILATLSKPSVVMLPFVLALCVWWMRGKIR
                     WHDTLALAPFALISALASAWTIWEQRFHARAVGPDWAQTFPERLIIAGKGIWFYLGKL
                     VWPHPLIFIYPRWDVDSSKVVAYLPLLAAIAGLVALWLIHAKWGRALFFAAAYYVVSL
                     FPVLGFFSVYFFRYSFVSDHFQYLASMGPLALTGAGIAALLGRFCETPDHFASCPDTV
                     PRSGSTIGSPRRRLVLSAALCGILLVLFGFLTWRQTAQYHNLSALYTATLQKNPGCWM
                     AHYNLGIVLSEQGETDQAIDHYRQAVTLRPDYTEAHYNLGRLLVEQGQFNDAIAHYER
                     AAAINPADAEAQNNLGVTLFGIGRPDDAIAHYQKALEIRPHYAEASCNLADALIAKGD
                     FDGAIARYKACLAAIPDQEEAQYNLASALLRKGRTDEAIVEYQKVLQMQPESADAHAN
                     LGIAWLAKGRARDAMAEYTKALQISPENLAALSNLAWLLATSSDPTLRNGAEAVRLAE
                     RADSASSRSDKHPTVLRILAAAYAEAGQFAEAKETAQHALEAANIQGNTTLAQALQGE
                     LALYDLGLPYHK"
     gene            complement(8437..10368)
                     /locus_tag="VIS53_09500"
     CDS             complement(8437..10368)
                     /locus_tag="VIS53_09500"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY5768056.1"
                     /translation="MQFVPGISSAQTMPAARAPTAAGRKPGLWILDSWRDLVLYVCTP
                     LLLVPMFIAAQGFWSAEYIYLFVAAFGAMGHHLPGMIRAYGDRALFQRFRWRFICAPI
                     FLVVVCAAFSVWNLTGIVLVAFIWGVWHGMMQTYGFCRIYDAKVGSFAELTRRLDFAV
                     CGIWFATAVLLSPQRMTDTLETYYSAGGPFIPPALLRAGQQGLLALALLISALFLANF
                     IWMWSSGKRPSPVKLVLLITSISFWWYCNNIVASVLVGVALFEVFHDVQYLSLVWIYN
                     RKRVESDSAIGGFMRFVFRRSGALVGVYIGLVLAYGGLSLSKSYVGIDAVKNILTGVV
                     TASALLHFYYDGFIWKVREKSTRQSLGIAGGTTDVSLGGFLPGWALHGLKWVAIFVIP
                     LAILWYAEIQSGRGKLERLGAIVADLPTSARAHINYGTELQEAGRADEAAKEFADAIR
                     LNPGSAKAHVNLGSLLTAKGELDAAQSHFEQGLRIDPSNAEYHSGYAYLLDQLDRKDQ
                     AAAECETAIRLAPKSPQAHYGYGAFLEKHGQQEEAIAKYRQTLQLDPSHIDAHLDLGG
                     LLLEKGELTEAREHFAKASELNPKLAQPHNYLGKVLMREGNVSQAIAQFEEALRLHPD
                     FPEAEQNLRIAKGTNAQSP"
BASE COUNT         2522 a         2912 c         2797 g         2424 t
ORIGIN      
        1 acatgaagga gaaggttcac ccagtgataa ccagtcgtat tgagtcccca taacgcgtgc
       61 tcgatgcgaa atgtgctata agtgaacggg aaatactgcg agggggaatc gagggaaaac
      121 caaatccgct gccaaccatc cggggcagtt aacaattcgt tgttgatgat ataggcgtcg
      181 tcgtcccaga gaaaaccccc atgccaggct ggtcggtacg ccaagatcgt cacggccgcc
      241 agaacgacag caaaaatcaa cgcgcgaccg cgcggggtaa acatgcgcct cgtgatttcg
      301 tgcataccta gccgcaaccg atcacactcg aggaggcaaa gcgccgccga atcgctgaac
      361 tccaaagcgg ttcccccgaa atgtaggccg tcaccttcag ttgcaacgtt ccgtttctca
      421 tcgaaatagg acctttcgtg ctgcgtaaga ccgacatcaa cggaaagctc gtgcagtttg
      481 catggtgggc tctggcgaca atcgtttttg ctctcgtcct tgcaatcagg attcgtctct
      541 ttggaattcc gctcgaacgc gacgaaggcg agtacgctta tgccggccag ctcatattgc
      601 aaggcatccc gccttacaag cttgcttata acatgaagtt tccgggcacc tatgccgcat
      661 atgcgttaat catgtcgatc ttcggacaaa ccattaatgc gattcatctc ggtttgctcc
      721 tgataaatgt tgccaccatc gcactgattt tcctgctagg gcgccgattg atcaacacga
      781 tggcgggagt tactgccgca gcgagttatg ccgttctgtc tgtgagtccg tccgtccttg
      841 gcctcgccgc acacgcgaca aattttgttg tactgcccgt cctgggcgga atattgctcc
      901 tgctcaaaaa acaacgcgtg acggcttccg agccgtctca accaaagcag ctcgcgcgac
      961 tattcgccag cggattactg tttggtattg gcgccttgat gaagcagcct ggcctcctat
     1021 tcattccctt cggcgcaatc tacattgtct ggaatgatct gaaccgccgg cgttccctga
     1081 acaaaacgct tctgcgaatt ctgatcttcg tgacgggggc ggctgttcca cttggagtta
     1141 catccttgat cctctggtac gcaggcgttt tcgataagtt ttggttttgg acaatgaatt
     1201 acgcctggca atatggcagc gtcgtgccgc tcagtcaggc gccacaaatt ttttccggca
     1261 gcgctaacga agtcgtcctg actgcctggc caatatggat actggcgggg atcggagcgc
     1321 ttacgggttt tcgggatcag cgcagacgca ccagcatact gtttctcatt gggtttctat
     1381 tcttctcagc gttggcggtg tgcccgggat tttactttcg aacgcattac ttcatccttg
     1441 ttctaccggc agtatcgctc cttgccggcg cggcactcag caaacttacg gagattctgg
     1501 agggtcggac aattctggtt agaatcgttc cactgttcct ttttgccgtt gctctgagcg
     1561 tcccaatcct tttggacaaa aaaatctttt tcgagctttc ccctaaccaa gcttgtggac
     1621 tcatctatcc cgacaatccg tttctggaat ctgttcggat tggcacctac atgcgcgaac
     1681 atactgaacc cggggacaca attgccgtgt tgggctctga acccgagatt tatttctatt
     1741 cccatcggca ttcggcgacg ggatacattt atacttatgg tttaatggag tcccaaaaat
     1801 acgcacagca tatgcagcag gagatgatta gcgagatcga agcggcgcgt cccaagtatc
     1861 taatctcggt cgcgatgaac tattcctggc tgcgacgacc tgactccgct gaaacaattt
     1921 tcaattgggc gaaccagtac gtggcccaaa attacacggc agccggtttc gtgaatatta
     1981 cgccgactaa gaccgattac ttcttcggcg acgttccgca atcagtggag actctgaaga
     2041 actacatcct gatttacaga cgaaaccttt aagccagctt cgttccaaaa atttaggccg
     2101 caggtgcaca caattagcaa atcaaccgct ctccgcaggc aaaacctacc ttgggtgacc
     2161 gcctgcattt gcgtctgtct cttcgtcctg acgtggatcg tcttttgtca aacattccgg
     2221 tacgatttcg ttaactacga cgatccgcgt tacgtttatc agaacacgag gatcacgagt
     2281 ggcatcagcg tcgccaacgt cgcctgggcg ttttctcata tccattccga aaactggcat
     2341 ccgctgacga caatcacaca tatgcttgat tgccaactcc acggagtaaa cgcaggctgg
     2401 caccacttta ctaatgtcct cctgcactct tgcgccgtcg tccttctttt tgtggcgctg
     2461 gaacgcatga caggcgcgtt gtggcggagc gcgtttgtct ctgtggtttt cgctgtgcat
     2521 ccgttgcatg tggagtcggt cgcatggatc gcagaacgca aggacgttct gagcgcattt
     2581 tttttcatgc tcaccctgct cgcgtactta cgttacacgc gcgcaccatc gattggtcgg
     2641 tatttaacag tggcattggt ggtgggcctc gggctgatgt caaaacccat gctggttaca
     2701 ctgccgttcg ttcttttact cctcgattat tggcccctcg agagaattga agccaagagg
     2761 gcaaatacgg gccgtcggct gttacaactc gttttggaaa agattccgct gatcacgctt
     2821 tctgccgttt caagcatggt cacttttctg gctcaacgag gagcaatcgg ttggactgag
     2881 cagttgccag tgccaacgcg aattagtaac gccttggtcg cctatgttat ttacatccgg
     2941 caaatgttct ggccaacaag gctcgctgtc ttttacccgc acccggaaaa ccgattgccg
     3001 gcattggaaa tcagtttagc cctgatcgtt cttgttggaa tcaccgcgat agcatttatc
     3061 tttagaagga aagcgcctta tttcgtgacc ggttggttgt ggtacctcgg catgcttgtg
     3121 ccggtgattg gattggtaca agtaggatgg cagggacacg cagatcgcta cacatatttg
     3181 ccgcagatcg gcctttacat tgcggttacc tgggcggtaa cagatttgac tcactcctgg
     3241 cgctttcaac ggatagctct gggcaccgcc gccgtggttg tactcggtgc tctaacttgg
     3301 tccagccggc tgcaaacgtc ttactggcgc gatagcgaaa cgcttttcac tcatgcactc
     3361 gctgtcacca gcaacaacga tgttgcgctg aataaccttg gcatcatttt cctggaaaaa
     3421 ggacaactgg acgacgccat ttccaaatta caagcagcga tagatctgcg tcctgaaaac
     3481 gcaccggctc atgacaatct cgcgaaggct ctgttgaaaa aaggacaagt ggccgaagcg
     3541 atggttcatt atcgcaaatt cttggagtta gaacctgtga acgtcgaggc gcgtaacact
     3601 ctgggaacag cgttgattca acaagggcac ctaagagagg ctattgacca gtggcaacag
     3661 gcgctggcac tccagccaga gaacggaaat gccgcgagca atcttgcctg ggtgttcgca
     3721 acgtgcaccg acgaatcaat ccgcgatgga acacgcgcgg ccgaactggg cgagaaagcg
     3781 cttcgtatct caggcggcaa gattccaatg attcataaag tgcttgccgc cgcgtacgca
     3841 gagagcggac gttttgctga tgccgtggaa accgcgcagc gcggcgccga gttagcagct
     3901 agtcagggca accctgcttt ggccgccgaa ctggaaagca atattgctct ttaccaatac
     3961 ggcagaccgc tgcgcgatcc aagcataaca aatggcagct cgtcgcctta gcacgcgggc
     4021 catgaagaag cggcaggttt cgaaccgccg aaagcattcg tccggtgcgt ctgacttgaa
     4081 gtcgtgtgtt cgcgaccggc atgtgaaatc accggtcact gacctcctcg tctgccttgg
     4141 tctggtggca gtcacctggg ccgtattcgg tcaaacgttg actcacgatt tcgtcaattt
     4201 tgatgatcac gtttacgtct atgaaaatcc gctcgtcata agagggcttt ccactgaagg
     4261 gataatcgat gcattcacgc atactcatgc gcggaactgg catccggtga ccacagtttc
     4321 tcacatgctc gattgccagc tgtatggatt aaacgccggg ggccatcact tcaccaacgt
     4381 tattcttcat acaatctcgg tgctgttgct ctttctcatg cttaagcaaa tgaccggtgg
     4441 gctctggcaa agcgcttttg tggccgtcct ttttgccatt cacccgttgc acgttgaatc
     4501 ggtcgcatgg atcgctgagc gaaaggatgt tcttagcgcg gtgtttttta tgctgacgct
     4561 ggccgcgtat actcgctatg cccgggcccc ctccgcacct cgttatctgc ttgtagcgtt
     4621 gcttttcgct tttgggctga tgtcgaagcc catgcttgta acggtgccgt tcgtgctgtt
     4681 gctgttggat tactggcccc tcggtagaat tggaagtcag aaatcggaag tcggaagtcg
     4741 agtgcgaaga ttgatcacgg aaaaactgcc gctgttcgtg ctgtctgcgc tttcgtgcat
     4801 cgcgactttg ttgacgcaaa ggcaaggtcc aaacgcgatc gatcaactgc cgtttctatg
     4861 gaggctgaac aatacgtttg tgagttacgt tacctacatt tcgcagatgt tatggccagc
     4921 gaggcttgcg gtgttctatt cgcatcccaa cgatcgtctt ccgtttgtcg aagttacaat
     4981 ggcgatcgca ttccttgttg gtatcagcct gctcgtaatt tatctgcggc gtacaaagcc
     5041 ttaccttttt accggctggt tttggtattt gggaatgctc gttccagtga ttggtttcgt
     5101 tcaggttggt gagcaagcgc atgcggatcg ttatacgtac ctgccgcaga tcggccttta
     5161 catcatgata gcgtggacag ttggagacct tgtcttggaa tcaacgtcgc gtgttcgtcg
     5221 agcagtcgtc ggcgttgcgg ccgcaatagc aatcgtatgt gtgggggtgc gtgcttttgt
     5281 ccaagtctcc tattggaaaa acagtgagac gctgtggagc cacacgctcg ccgttactag
     5341 cgacaacgac gtcgcgcata ataacttggg ctttctcttt ctgcgtaaag gagaattgga
     5401 caaagctatt tcacagtttc aggcagcgct agatatacga tccagaaaca gtgagaccca
     5461 ttacagcctc ggtgcggcac tcgtccaaaa caacctcggt aacgcttttg ccaggaagca
     5521 gctttgggat gaagcaatcg accatcttca ggaagcgata aacttgcgtc ctgattacgc
     5581 ggatgcgtac ttcaatctcg gaagtgtgct attccaccag agccgaatcg acgaagcgat
     5641 cgcacagtgg caaaaggcgc tcgcgatacg tccacgcgac gtagaagctc acaggaatgt
     5701 tgccagcgcc cttcgcaaac agggaaatgt taaaggagca atcgcacagt atgagcaagc
     5761 gctgaatata acgccagaag acagcgtggc gctgaacaat ctggcatgga ttttggccac
     5821 ttcttccgac gcttcagccc gcgacggcgc acgagcagtg acgttggcgc tgaaagcggt
     5881 gcaggcttca gggggcagag atgcaaattt cggtcgtacg cttgccgcgg cgcgtgcaga
     5941 ggctggacaa ttcgccgaag ccgtcgcgac agcggaggca gcaaaggcat tagccagcac
     6001 acaaagtaag ccggagctcg caagcagatt ggaagaagaa attgctctct atcgctcgcg
     6061 tgttgcgctg cgcgaataac ggaaacgcgt cgtcggcgaa tgggattcta gctcgtttac
     6121 ttatgatacg gcaaacccaa gtcgtaaaga gcaagctcac cttgcagtgc ctgggccaaa
     6181 gtagtgttgc cttggatgtt cgctgcttcc aacgcatgtt gggccgtttc tttagcctcg
     6241 gcaaactggc cagcttcggc gtaggccgca gccaaaatcc ggagaacggt ggggtgcttg
     6301 tcgctcctgg aacttgcgga gtcggcgcgc tcagccaagc gcacagcctc ggctccgttt
     6361 cgcagggtgg gatcggaaga tgtcgcgagc aaccatgcca ggttgctgag cgcagctaaa
     6421 ttttcggggg aaatttggag tgcctttgtg tactcagcca ttgcatctcg agcgcgtccc
     6481 tttgcaagcc aggcgatgcc cagattggca tgagcgtctg cgctctcagg ctgcatctgg
     6541 aggacctttt ggtactcgac aatcgcctca tccgtgcggc ctttgcgcag aagagcgctc
     6601 gcgagattgt attgcgcttc ttcctgatcc gggatggctg cgaggcacgc cttgtatcgg
     6661 gcaatggcac catcgaaatc gcccttggct ataagcgcgt ccgcaaggtt gcatgaggcc
     6721 tcggcatagt gaggccggat ttcgagcgcc ttctgataat gcgcaatcgc gtcatcagga
     6781 cgcccgatcc caaaaagcgt aacaccgaga ttgttttgtg cttctgcatc ggcgggatta
     6841 atcgcagcgg ctctttcgta atgggcaatt gcgtcgttaa actgaccttg ctcaaccaaa
     6901 agtcggccca agttgtaatg cgcctccgtg taatcaggcc gcagggtaac ggcttgccgg
     6961 taatgatcga tcgcctgatc cgtctctccc tgctcgctga gaacgatgcc gagattgtaa
     7021 tgcgccatcc agcaacccgg atttttttgt aacgtcgctg tgtataaggc ggagagattg
     7081 tgatattgcg cggtctgccg ccaggtcaaa aagccgaaca ataccaggag gattccgcag
     7141 agagcagcgc ttaaaaccaa tcgccgtcgc ggactaccga tggtgctgcc cgatcgcggt
     7201 acagtgtccg ggcaagacgc gaagtggtcc ggtgtttcac aaaaacggcc gagaagggct
     7261 gcgattcctg ctcctgtcaa cgcgagcggc cccatgctgg ccagatactg aaaatgatcg
     7321 cttacaaatg agtaacgaaa gaaatacacg ctgaaaaagc cgagcacagg aaacagcgaa
     7381 acgacatagt aagcggcggc aaagaacaga gcacggcccc attttgcgtg gatcaaccac
     7441 aacgcaacca gcccggcaat tgctgccagc aacgggagat acgcaacgac tttcgacgaa
     7501 tcaacgtccc accgtggata gatgaagatc agaggatgcg gccacaccag tttgccgagg
     7561 taaaaccaaa tgcctttgcc agcgatgatc agacgttccg gaaaggtttg cgcccagtcg
     7621 ggaccaactg cgcgcgcgtg aaatctctgt tcccaaatcg tccacgcgct cgcgagcgct
     7681 gaaatcagag caaatggggc gagcgccagc gtatcgtgcc aacggatttt tcctcgcatc
     7741 caccagacgc agagcgcgag cacaaaaggc agcatcacca cggaaggttt gctgagcgtc
     7801 gccagaatga agaaaaggag agataaagca aaaatcaatg aacgacggtc tccagtccac
     7861 cgctggagcg gtctggagac tggccctcct tgatcttccc atttcaaaaa gaaaaggatc
     7921 gagagcaaat aaaacacgca ggactgcgtg ttcttcagtt cagtaaccca cgcgacggat
     7981 tggaccatta ccgggtgcaa cgcccagagt gcagcgccga gccatgcgcc gcggacttgg
     8041 agtcgtcgca gcccccgcca gagcagaatc gccgagacgg cgtgcaacaa aacattgaga
     8101 gcgtggtatg gcagcgggtt taggtctaca aacttgtgca gcgcccaaaa cgtcgtcaga
     8161 acgagcggat aatagaccgc ttgcgtcgtc gtccagattt ccttcaagcc gagcggtcca
     8221 acgacgcaag gattctgcgt cagatgcgat tcatcatccc aaatgaagcg cgcccgaaaa
     8281 acctgagcgt acgcaatgaa aatgaaagca attaagagca gtgcccaaaa ccactcccgt
     8341 ctccagaatg ggacacgaat ttcacgaact ggcacgaatt gatccaagac ttagccttaa
     8401 cgttaccgaa ttgctggcaa ttcgggtaga attacgtcaa ggagactgag cgttagtccc
     8461 tttggcgatg cgcaggttct gttccgcttc tggaaaatca gggtggaggc gcagcgcttc
     8521 ttcgaattgt gcaatcgctt gggaaacgtt cccttcacgc atcagaactt ttccaagata
     8581 attgtgtggt tgagccagct tcggattgag ttcggacgcc ttcgcaaaat gctctcgggc
     8641 ttccgtcagc tcgccttttt ccaaaagcaa accacccaga tcgaggtgcg cgtcgatgtg
     8701 ggaaggatcc aactgcagag tctgtcgata tttcgcgatt gcctcttctt gctgtccgtg
     8761 tttttccagg aacgcaccat agccgtagtg cgcttgcggc gacttcggcg ccagacggat
     8821 agccgtctcg cattcagctg cggcttggtc cttccgatcc agttggtcca aaagatatgc
     8881 gtaaccggaa tgatactcag cgttgctcgg gtcgatccgc aatccctgct caaaatggct
     8941 ctgtgctgcg tcgagctctc ccttcgccgt caacagcgat ccaagattga cgtgggcctt
     9001 cgccgagccg ggatttaaac gtatcgcgtc agcgaattcc ttcgctgctt catcggctcg
     9061 cccagcctcc tgcagctcgg tcccgtagtt aatatgggcc cgcgcgctcg tcggaagatc
     9121 cgcaacaatc gcgcccaaac gttccagttt gcctcgacca ctttgtattt cggcatacca
     9181 gagtatcgcg agaggaatca caaaaatagc cacccatttt aggccgtgca aagcccagcc
     9241 gggcagaaaa ccacccaatg aaacatctgt tgtaccaccg gcgataccca aagattgccg
     9301 cgtcgacttc tcgcgaactt tccaaatgaa tccgtcgtag taaaaatgca ggagtgccga
     9361 tgcagtcacg acgccggtaa gaatattttt gacggcgtcg atgccgacat acgatttgga
     9421 caaactcagc ccaccgtagg cgagcaccaa gcctatgtac actcccacaa gcgcgccact
     9481 gcgccggaac acaaagcgca tgaacccacc gatagcgctg tcgctctcga ctcgtttccg
     9541 attataaatc cagacgagcg aaaggtactg tacatcatga aatacctcga acaatgcaac
     9601 gccaaccaga acgctcgcca cgatgttatt gcagtaccac caaaacgaaa tgctcgtgat
     9661 gagcaacacc agtttcaccg gactgggccg cttgccgctg ctccacatcc aaataaaatt
     9721 cgccagaaac agcgctgaaa ttagaagcgc cagcgcaagc aagccctgct gccctgcccg
     9781 gagaagcgcc ggcggaataa aaggtccgcc tgcggaatag tacgtttcca gcgtatcggt
     9841 catacgttgc ggcgaaagaa gaacagccgt tgcaaaccaa atgccgcaca cggcgaaatc
     9901 gaggcgacgc gttaactcag cgaatgatcc aactttcgca tcataaatcc ggcagaatcc
     9961 gtacgtttgc atcattccat gccagacgcc ccagataaac gccacgagca caattcccgt
    10021 caggttccac acggaaaaag ccgcgcagac gacgaccaaa aaaatcggcg cacaaatgaa
    10081 acgccatcgg aaacgctgaa agagcgcacg gtcgccgtac gctcgaatca ttcccggcaa
    10141 gtggtggccc attgcgccaa acgcggcgac gaagagataa atgtactccg cgctccagaa
    10201 cccctgcgcc gcgatgaaca tgggcaccag caacaacggt gtgcacacgt aaagaaccaa
    10261 gtcccgccaa ctgtcgagaa tccacaagcc aggcttgcgg ccggccgctg tcggcgcccg
    10321 cgcagcgggc atcgtttgcg cagatgaaat ccccgggacg aactgcatgc ctttttccta
    10381 gcggagccaa gtctctctca aagcgcaacg aaaatcaatt cctcagatca ttgagaggca
    10441 cgaaactcaa aatcataacg gcgcagcttt gccaaaaaaa agaattccgt cgggatatct
    10501 cgacgctgcc agacatgaca caaacgcgga aagcaaaacg gccgggctcc ttacagagcc
    10561 cggccgctgt gaattaaccc acgttagggg gtttagaatc gcttcttcag cccgacgtac
    10621 cagaaccggc ctttaatcgt ggcaagtgat tcgtc
//
LOCUS       DATDAJ010000379         2679 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2119075, whole genome shotgun sequence.
ACCESSION   DATDAJ010000379 DATDAJ010000000
VERSION     DATDAJ010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119075"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VIS53_09505"
     CDS             complement(<1..311)
                     /locus_tag="VIS53_09505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768057.1"
                     /translation="MFRTMSLDLNTILKDWPYESGTVKVRKITGLDGREKLQLRVDLG
                     VLQMEISGRPDGRRPHNCESLLEYHRKRATRSEQKGEAYELTPEQCAELQQEGIQYYH
                     R"
     gene            424..1314
                     /gene="xerD"
                     /locus_tag="VIS53_09510"
     CDS             424..1314
                     /gene="xerD"
                     /locus_tag="VIS53_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEY5768058.1"
                     /translation="MEDSIDAFIRFLAVERGLSENYQLSTQRSLTEFAQWCGAKKKIT
                     HPRGVTLPMMSEYLAERKRAGLSASSIKLVVVALKIFFRFLAAKGIIERDPAEALALP
                     RIERFLPETLNELQVEEFLEKIDTKAVHGLRDRAMIELLYASGLRISELANARLEDFN
                     FEQRIVRVTGKGNKTRLVPVGRKACEALGAYLSAERPKLVKPRTSSEIFISERGTKLT
                     TARIWQIVKKHAQRAGLEKNVYPHLLRHSFATHLLSNGADLRIIQEMLGHADISTTQV
                     YTHVDQQRLKAVHRQFHPRA"
     gene            1419..>2679
                     /locus_tag="VIS53_09515"
     CDS             1419..>2679
                     /locus_tag="VIS53_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768059.1"
                     /translation="MKRILFLLIALAAAAFAGWYYWQFSQRFSSAPVAGLLPRETIFV
                     AQIPDFNRARDEWQHCDIYQLYREPAVQDFLRKPLGNVPKTDAVSQTLLEIEQLAPKN
                     AFVALTSIENNNPKFVGGFHFRGSQEEAERIIGKWRSMLMGQNSSLKREKVQYQGHEI
                     EATKTGSFTIATAYDPPWFFVATDAADMQALLDRADRRSSDADNRLDKEETYRAAISR
                     RPSNDVGFFYLQPKTFSQRLAALRAAVGSTPAPGEGTMLEKMRCITGSMRFENGKMHD
                     VLFLGMPKLEQDTTLSRSSMSLGTKETFFYLAMLLNLGERMDTLNQAAAFAGTKIFQA
                     LSDSGITAANWKAAFGIELGSLANWPSNAHWPSLLVTLPVTDATKARQIVEALLRAEE
                     EGSWTATEKDGVRYFSKQSAASFVAITP"
BASE COUNT          618 a          714 c          736 g          611 t
ORIGIN      
        1 taccgatgat aatattggat gccttcctgt tgcagctccg cacattgctc aggggtaagc
       61 tcgtaagcct cgcccttctg ttcggaccgc gtcgcgcgct tccgatggta ctccaggagc
      121 gattcgcaat tatggggacg ccggccatcg gggcgcccgc tgatttccat ttgcagcacg
      181 ccgagatcca cgcgcagctg caatttttcg cgaccgtcca ggccggttat tttgcggact
      241 ttaacggtgc cgctctcgta gggccaatcc ttcagaatgg tgttgagatc caagctcatc
      301 gtacggaaca tcgaacattc actgttcgct tgtcaataac ttcgcggttg ggcgagatac
      361 cgcgcgaacg aagtggcata atttctacta gtcactacat agtgctgatt tagcattggc
      421 tcgatggaag attctattga cgcgttcatt cgttttctcg cagtggaacg aggtctttcc
      481 gaaaattatc agctttccac ccaaagatcg ctgactgaat tcgcgcaatg gtgcggtgcg
      541 aagaaaaaaa tcactcatcc gcgcggcgta actctgccga tgatgagtga gtatcttgcg
      601 gagcgcaaac gcgccggcct ttcggcgtct tcgatcaagc tggttgtcgt tgcgctcaag
      661 attttttttc ggtttctcgc cgccaaagga atcatcgagc gcgatccggc cgaggcattg
      721 gcgctgcctc ggatagagcg ctttctcccg gaaacgctga acgaattgca agtggaggag
      781 ttcctggaaa aaatcgacac taaagccgtt cacggtttac gcgaccgggc aatgatcgag
      841 ctgctttacg caagcgggct gcgcatttcg gaactggcaa atgcgcgact ggaggatttt
      901 aatttcgaac agcgcatcgt gcgcgtgacg ggcaaaggaa acaagacccg tctggtgccc
      961 gttgggcgaa aagcatgcga agccctggga gcatatctct ctgccgagcg accaaaactg
     1021 gtgaagccgc gcactagcag tgaaattttt atttccgaac gaggcacgaa attaaccaca
     1081 gcgcggatct ggcagatcgt taaaaaacac gcgcagcgcg ccggactgga aaagaacgtt
     1141 taccctcacc ttctgcggca cagcttcgca acgcatttgc taagcaatgg cgcggatctt
     1201 cgaatcatcc aggagatgtt gggccacgcc gacatatcga cgacccaggt ctatacccat
     1261 gtcgatcaac aacggctcaa ggctgtgcat cgccaatttc atccgcgcgc gtagcgaatg
     1321 aaatgaactg accggcggtt tttgagccgg ggatttgtgt tgaacgccca tcgaccatcg
     1381 agtatccagc atccacttgt ggtgaggcag ctaactttat gaagcgaatt ttgttccttt
     1441 taatcgcact agccgcggct gcatttgctg ggtggtacta ctggcaattt tcgcaacgat
     1501 tctcaagcgc tcccgtggct gggcttctgc cgcgcgagac gatttttgta gcgcaaatcc
     1561 cggatttcaa ccgtgctcgc gatgaatggc agcactgcga catctatcag ctgtaccggg
     1621 agcctgcggt gcaggatttt ttgcgcaagc cgctgggcaa cgttccaaaa acggatgcgg
     1681 tatctcaaac gctactggaa atcgaacagc tggcgcccaa gaacgccttc gttgcgctga
     1741 cctctatcga gaataacaat ccaaaatttg tcggcggctt tcatttccgc ggcagccagg
     1801 aagaagcgga gcgaatcatt ggcaaatggc gctcgatgtt aatggggcaa aattcaagcc
     1861 tcaagcgcga gaaagtgcaa tatcaaggcc acgaaatcga ggcgaccaaa acgggttcgt
     1921 tcactattgc aaccgcctat gatcctccgt ggtttttcgt ggcgacagat gctgcggaca
     1981 tgcaggcgtt gctcgatcgt gccgatcgcc gttcatcaga tgcagataac aggctcgata
     2041 aggaggagac gtatcgtgca gccatttcac gtcggccctc caacgacgtc ggattctttt
     2101 atctgcaacc aaagacgttt tcgcaacggc tcgcggcgtt gcgcgctgct gtcggatcaa
     2161 ctccagctcc cggcgagggc acaatgctgg agaaaatgcg ctgcatcacc ggttcgatgc
     2221 gatttgagaa cggaaaaatg cacgacgtgc ttttcctggg catgccaaag ctggaacagg
     2281 acacgacgct cagccgctcg tcgatgtctc tcggaacgaa ggagacattc ttttacctcg
     2341 cgatgctgct gaatctcggg gaaagaatgg acactctcaa tcaggcggcg gcctttgcgg
     2401 gtacgaagat ttttcaggcg cttagcgata gcgggataac tgccgccaat tggaaagcgg
     2461 catttggcat cgagctcgga tctttggcta actggccttc aaacgcgcat tggccgtcgc
     2521 tacttgtgac actgccggtg actgacgcga ccaaagcacg gcagatcgtg gaagcgctct
     2581 tgcgggccga ggaagaaggt tcgtggacag ctaccgagaa agatggcgtc cgctattttt
     2641 cgaagcaatc tgctgccagc tttgtcgcga tcaccccta
//
LOCUS       DATDAJ010000380         4781 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2119463, whole genome shotgun sequence.
ACCESSION   DATDAJ010000380 DATDAJ010000000
VERSION     DATDAJ010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4781
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119463"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            272..1165
                     /locus_tag="VIS53_09520"
     CDS             272..1165
                     /locus_tag="VIS53_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEY5768060.1"
                     /translation="MARSGVGKGLGALIGTPAIVTPKDGSEAAERVHQIELTSIVPST
                     LQPRKDFARDVLLELIESIRQHGIIQPLIVRQVGTRFELIAGERRWRAAQELGFATVP
                     AIVRTANDLEVLELSLIENLQRADLNPIEEAQGYARLANEFGMRQEDIALKVGRSRAA
                     VANALRLLDLHPQVQIWLAQNLVSVGHAKVLLALKAPEEQLLAAENVLRRNATVRSTE
                     RMVTRLLGIGRGRRKPRRATGDSGATATAVEDLQNRLQQHLATHVTIHHREKRGRIEI
                     EYYGTDDLQRIVTAVGLPPAD"
     gene            1202..2125
                     /locus_tag="VIS53_09525"
     CDS             1202..2125
                     /locus_tag="VIS53_09525"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family metallopeptidase"
                     /protein_id="HEY5768061.1"
                     /translation="MNSRQTLFSITPLLLLVLAWIVFAEQSCAAEAKIWEQFSGEKAL
                     VHVQRLVDLGPHPAGSDAIEKARDYIEAQLRHSGWQVTRQAFSDDTPRGKIHFVNLIA
                     RFGGEANSTSPSLLLCSHYDTKLFDTIRFVGANDGGSSTGMLLEMARVLGQHPSLARK
                     VELAFFDGEEAYENFSATDGLYGSRYFARQLQSEGAKRFRGGILFDMVGDRSLGITLP
                     PNSPPAMAHDIFAAAEALKLRKYFSYFDRDLIDDHTPLNGIGIPTIDLIDFDYPSWHT
                     ADDTIDKISAQSLQTVGSVALYYLAEFAFKR"
     gene            2194..3312
                     /locus_tag="VIS53_09530"
     CDS             2194..3312
                     /locus_tag="VIS53_09530"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY5768062.1"
                     /translation="MERPASSTQPKNINVGVVGLGIIGRAIAAHLRRKGFSVFVWNRS
                     PRPVPNFVGSPGELADFCNYIQIFVSDDDALLQTVEQLSEKLTPRHVIFAHSTVAPDS
                     MRAAADVVERRGARFVEACFTGSKGAAEKGELVYYVGGTDEALREGRPILEASSKEIV
                     QIGPVGQASAIKIATNMVSAASVQATAEALALVQAQGLPLEKFVEAMRINASYSGTLA
                     MKLPKMLERDFAPHFSVKHMLKDLQIASQIALSHYLDLGVTAAARDQLFEQMQWGHGN
                     DDYSAVLRKYLNEPSPEYSEEPQIQEPLEQSDAEESITGSVEAATENVEPQEASLVAS
                     AEPVLGFSGTVNAPAPAPTPLRRGFLKQLLSRFSSGEE"
     gene            3309..4217
                     /locus_tag="VIS53_09535"
     CDS             3309..4217
                     /locus_tag="VIS53_09535"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HEY5768063.1"
                     /translation="MTQRSGSERDFFLDLSACAKLRVGGADTSRFLNGQITNDLRKAS
                     ETVAIEACVLNAKGKLNAQIFISVIGEAFLIDAEPELRETLRARLERYVIADDVQIED
                     VTDEFSLFHVFTEKPPALESGRILSARRFATTGWDIWSDSARHDTVARELASAYVFID
                     SVAADVMRIEQGLPRWGHELTDEIIPIEANLEERTIDYQKGCYIGQEVISRIKMSGQT
                     NKRLCGLISLNNTPLQPGMKLVAPSASGKEAGWITSVTRSPRLGKEIALGYVKRGFNN
                     PATNLEALSLEPVGPIPVEVVPLPFL"
     gene            4457..>4781
                     /locus_tag="VIS53_09540"
     CDS             4457..>4781
                     /locus_tag="VIS53_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HEY5768064.1"
                     /translation="MANFFPRWTNWIPLKVIVCVIVTVCGLTGATWYYATPKYTKIGY
                     QPIQPVPFPHDIHVTQLGMDCRYCHSFVEVAAQSNVPNTATCMNCHAQVAKDNPKLQP
                     VQESWK"
BASE COUNT         1084 a         1280 c         1372 g         1045 t
ORIGIN      
        1 gattgttttt atctgtcaca gggatccgaa cagacaaaga accctaccgg gcaaaagtct
       61 ttgtctcttt cggaaccttt cgccgtgata cgcgattttg gttccgattg tcaatacttt
      121 ttttaactgt ttttcagaaa tgacacccat cacggccggc cctcaatgac cggacgaggc
      181 tcctgcgagg ctcggggcgt ggagcgattc gggcacggcc cggccgcttt gctgtttgcg
      241 ttgagaactc tgttccggta gcctcaggcg catggcacgc tcaggtgtag gtaaaggtct
      301 tggcgcgctg atcggcacgc ctgcgatcgt tacgcctaaa gacggatcgg aggcggcgga
      361 gagagtgcat cagatcgaac tgacgagcat tgtgccgagc acattacagc cgcgcaagga
      421 ttttgcgcgc gacgtgctgc tcgaactaat cgagtcgatt cggcaacacg gcattattca
      481 gccgctcatc gtccgccagg tcggcacgcg atttgaattg atcgcaggcg agcgccggtg
      541 gcgcgccgcg caggaactcg gttttgccac ggtgccagcc attgtccgga ctgctaatga
      601 cctcgaagtt ctcgaacttt cgttgatcga aaatctgcaa cgcgccgatc tcaacccaat
      661 cgaagaagcc caggggtacg cgagattggc taatgaattt ggaatgcggc aggaagatat
      721 cgcgctcaaa gtggggcgca gccgggcggc tgtggccaac gcattgcggc ttttggatct
      781 gcatccgcaa gtgcagatct ggttagctca gaacctggtt tcagtcggac acgccaaggt
      841 gttgctggcg ttgaaagcgc cggaagaaca gctgctcgct gcggaaaacg ttttacgccg
      901 caatgccacg gtgcgttcga cggagcggat ggtgacccgc ttgctcggta ttggtcgcgg
      961 acgacgcaaa ccgcggcgtg ccactggcga ttcgggcgcg acggcaacgg cagtagagga
     1021 tttgcaaaac cgtctgcaac aacatctggc cacacacgtc acgattcacc atcgagagaa
     1081 gcgcggacga atcgagatcg agtactacgg aacggacgat ctgcaacgga tcgttactgc
     1141 tgttggattg ccgccagcgg actaagggat tggagtgttg gagtagtgga gtattgaagt
     1201 agtgaattcg cgccagacgt tattttccat tactccatta ctcctgctcg tgttggcgtg
     1261 gatagtgttt gccgagcagt catgcgccgc agaggcgaag atctgggagc agttctcggg
     1321 agagaaagcc ctggttcacg tgcaacggct tgtcgatctg gggccgcacc ccgccggctc
     1381 ggacgcaatc gagaaagcca gagattatat cgaggcgcaa ctgcggcatt cgggctggca
     1441 ggtaacacgg caggcattca gcgacgacac gccacgagga aaaattcact ttgtaaatct
     1501 gattgcgcgg ttcgggggtg aggcgaattc gacgtcgccc tcattattgt tgtgctcgca
     1561 ttacgacacg aaattattcg acaccatccg ctttgtcgga gcgaacgacg gcggctcaag
     1621 cacaggcatg ctgttagaga tggcccgtgt gctcgggcaa cacccgagtc ttgcccggaa
     1681 agttgagctg gcgtttttcg atggcgaaga ggcgtatgaa aatttttctg ccacggatgg
     1741 gctgtacggg agccgctact ttgccaggca actccaaagc gagggcgcca aacgatttcg
     1801 cggaggaatc ttgttcgaca tggttggtga ccgttcgctt ggtatcacgc ttccgccaaa
     1861 ttcaccgccc gcgatggcgc acgatatctt tgccgcggcc gaagcgttga agctgcgaaa
     1921 atacttcagc tacttcgacc gggatctcat tgacgatcac acgccgctga acgggattgg
     1981 gattccgacg atcgacctca tagatttcga ttacccctcg tggcacaccg cggatgatac
     2041 gattgacaag attagcgcac agagtcttca aactgtcggc tcggtcgcgc tgtattatct
     2101 ggcggaattc gcgtttaagc gttgaagccg cgaaatttct ggattgcgtg gaagcatttt
     2161 tgtcggcagg ctgatcgctg aactgccgac ctcatggagc gtcctgcgtc ttcgacccag
     2221 cctaagaaca taaatgttgg cgtggtcggg ctcgggatca tcggtcgcgc aatcgctgca
     2281 catcttcggc gcaaaggatt ttctgtcttc gtttggaatc gatcgccgcg gcctgttcca
     2341 aattttgtcg gttcgcccgg ggaactggcg gacttttgca attacatcca aatttttgtg
     2401 tctgatgacg acgcgctcct gcagaccgtc gagcagctaa gcgaaaagct cacgccgcgt
     2461 cacgtcatct ttgcgcattc gacggtcgct ccagattcaa tgcgtgcagc agcggacgtt
     2521 gtcgaacgca gaggcgcgcg gtttgtcgaa gcgtgcttca ccggcagcaa aggcgcagct
     2581 gaaaaaggcg agcttgttta ctacgttggc ggaacagatg aagcgttgcg tgaaggccgt
     2641 ccaattctcg aggccagcag caaggagatc gtgcagatcg ggccggttgg ccaggccagc
     2701 gctataaaga ttgcaactaa catggtcagc gctgcaagtg ttcaggccac agccgaggct
     2761 ctggcgctcg tgcaagccca gggtttaccc ttggaaaaat ttgtcgaagc gatgcgcatc
     2821 aatgcgagtt attccggcac gttggcgatg aagctgccaa aaatgctcga acgcgatttc
     2881 gcgccgcact tttccgtcaa acacatgttg aaagacctgc agatcgccag ccaaatcgct
     2941 ttatcacact atctggatct cggagtcact gctgccgcgc gcgatcagtt gttcgagcaa
     3001 atgcagtggg gccacggcaa cgacgattac tccgccgtgc tgcgcaaata tctgaatgag
     3061 ccgagtccgg aatattccga agagccacaa atccaggaac cgctcgaaca atccgacgcc
     3121 gaagaatcga ttaccggttc agtggaagcg gcgaccgaaa acgtcgaacc tcaagaagcg
     3181 agcctcgttg cgtccgcgga gcctgtgctc ggctttagcg gaacggtgaa cgcgccggct
     3241 cctgctccaa cgccgttgcg gcgtggattt ctcaaacagc tgctaagccg tttttcatcc
     3301 ggagaagaat gacgcagcgc tcaggatcgg agcgggactt ctttctcgac ctctccgcgt
     3361 gcgccaagct tcgcgtgggt ggggctgaca catcccgttt tctcaacggg caaatcacaa
     3421 acgatttgcg caaggcgagt gaaacggtcg cgatagaagc ctgcgtgctc aacgcgaaag
     3481 gcaaactgaa cgcgcaaatt tttataagcg taattggcga agctttttta atcgatgcag
     3541 agccggagct tcgcgaaaca ctgcgcgcac ggctggagcg ttacgtcatt gccgacgacg
     3601 ttcagatcga ggatgtcacg gatgaattct ccctctttca cgttttcacg gagaagccgc
     3661 cggcactcga gtctggccgg atcctctcgg cacgccgttt tgcgacgacg ggttgggaca
     3721 tctggagcga ctcagcgcgc cacgatacgg tggcacgtga attggcctca gcatatgtgt
     3781 ttatcgattc ggtagccgcg gatgtgatgc gaatcgaaca agggctgccc cgctggggcc
     3841 acgaactcac agacgaaatt attccaatcg aagcaaatct cgaagaacgc acgatcgatt
     3901 accaaaaggg ttgttacatc ggccaggaag tgatctcccg aatcaaaatg tccggacaaa
     3961 ctaacaaacg attgtgcgga ttgatatcgc tgaacaatac gccgctccag cctgggatga
     4021 aactcgtcgc tccttcagca tctggaaaag aagctggctg gatcacgagc gtcacgcgca
     4081 gcccacgact cggaaaagaa atcgcgctcg ggtacgtaaa acgcggcttc aacaatcctg
     4141 ccacgaattt ggaggcactt tcgctggaac cggttggacc gattccggtc gaagtcgttc
     4201 cgcttccgtt tctctgagga atttcgcagt tttcacaaat tcctatcgcg atttcaacga
     4261 gcaagcgcgg cagtgaaacg ggaaaagaaa ttttgttttg ccctcaggct ttgaatttat
     4321 agaatcttcg ttgctctcca ggcacgatta accttaacca ctttgcagcg tctgaacgaa
     4381 gcctatcctg accacagttt tcattcattg gtagcttggc ggctgcgcag cgtcggcgcg
     4441 gaggctgtct agcaccatgg ccaatttctt tccacgctgg acgaattgga tacccctcaa
     4501 ggtgatcgtc tgcgtgattg tgaccgtttg tggcctgacc ggcgcgacat ggtattacgc
     4561 cacgccgaag tacacgaaga ttggatatca gccgatccag ccggtgccgt tcccgcacga
     4621 tattcacgta acccaactgg ggatggattg ccggtattgt cacagcttcg tggaagtggc
     4681 cgcgcaatcg aacgtgccca acactgcgac atgcatgaac tgccatgccc aagtggcaaa
     4741 agacaatccc aagctgcagc ccgtgcagga gagctggaaa a
//
LOCUS       DATDAJ010000381         4438 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2125031, whole genome shotgun sequence.
ACCESSION   DATDAJ010000381 DATDAJ010000000
VERSION     DATDAJ010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4438
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2125031"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VIS53_09545"
     CDS             <1..411
                     /locus_tag="VIS53_09545"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY5768065.1"
                     /translation="KIHRRFRTPYITTIWTGIAVGIVAMLTDIGSLADLTNIGTLFAF
                     MLVCLGVIVLRRKDADRPRPFRVPLVPLFPLLGVFLCIVLMLSLPLETWGRFFVWLAI
                     GLSIYFLYGVRHSKLRRGIDTGITEDIPPPTIKT"
     gene            475..1413
                     /locus_tag="VIS53_09550"
     CDS             475..1413
                     /locus_tag="VIS53_09550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY5768066.1"
                     /translation="MTDESVIENQQIPVNKLKAGWELLRLTFAEWTNDNAFELSAALA
                     FYTIFSIAPVLLIAVGVASFFLAPDTATDQIVGEMEKMIGAQGANAVRQVIDSSRGFG
                     KGLWAVSVGIVTLIMGATAVFGELQSALNQIWDVKAKPDRGVIMSFIVDRLRSFSIAI
                     CVGFLLLVSLIISALISGLQNYMNNWLPGIPWVWHMANVVASFLVIAVLFAAIYKFLP
                     DVVISWKDVWIGAAVTALLFTGGKYAIGIYLGKTATASAFGAAGSLVVLLFWVYYSAL
                     ISFLGAEFTQVYARRYGPGIRPQKHAVRVGRKSDSI"
     gene            1450..1860
                     /locus_tag="VIS53_09555"
     CDS             1450..1860
                     /locus_tag="VIS53_09555"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY5768067.1"
                     /translation="MVQVSVNYTGDLHCDATHGPSQAKISTDAPSDNKGKGEAFSPTD
                     LVATALATCISTTMGIKADDLGVDLRGMTVSVQKEMSNDAPRRIVALPSEVHIPLAPD
                     HPQREVLEQTALNCPVHKSLPAEIHRPTKFFWEG"
     gene            complement(1975..2931)
                     /gene="rfaD"
                     /locus_tag="VIS53_09560"
     CDS             complement(1975..2931)
                     /gene="rfaD"
                     /locus_tag="VIS53_09560"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR02197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEY5768068.1"
                     /translation="MTKTTTASKPRFIITGGAGFIGSNLTLALQEKFPDAHLTVIDDF
                     RSGDFKNLAGYRGDFVAENLATLDWRENFGDPAAAGFDAIFHLASITDTTLHDQFVQV
                     HDNVESFRRLLNFARPTKTRIIYASSAATYGPATEASVESNGAAPANVYAFSKVIMDN
                     IARHAAAESPDWIIVGLRYFNVYGPREAHKGVPASMIYHLAQQMKTGKRPRIFKLGEQ
                     KRDFVYVKDAVEGSICALDAKTSGIYNLGTGQARSFNELIDVLNKCLGTNFQPEYFDN
                     PHAHYQNFTQADLTSARKALKYEPRFSLEDGVRDYIQWLYPE"
     regulatory      3009..3304
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3491..>4438
                     /locus_tag="VIS53_09565"
     CDS             3491..>4438
                     /locus_tag="VIS53_09565"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY5768069.1"
                     /translation="MQNRSVWFLWGSTSVSDAGFDVAPKQSFLNARISIRGNTEEKSA
                     IVGRARQHPRRVRYPIVFAPLFIFAQIVCHAQEATPTFSPSEAEVESVVVSATRFDIP
                     LDQSPASASVISSEELEQKQIQRVSDALREVPGLSVVQTGVPGQLTSVFTRGLRSEHT
                     QILLDGIPINQGLQGAFNFADFTTEDIDRIEVVRGPQSTIYGPRALAGVIQIFTKQGT
                     GTPGAMFAAEGGSYDTFREWSQSDGKVDDFDYSVGASHRDTENARPNNNYRNTTAIAD
                     VGWSPNPPSPGTGSAVASEQLRIASLFTYSVSDIGLPNTI"
BASE COUNT          949 a         1192 c         1254 g         1043 t
ORIGIN      
        1 aaaatccacc gtcggttccg cacaccgtac atcacgacga tttggactgg aatcgctgtc
       61 ggcatcgtcg ccatgcttac cgacatcggg tcgctggccg atctcacgaa tatcggaacg
      121 ctgtttgcct tcatgctcgt ttgtcttggc gtgattgttt tgcggcgcaa agacgcggat
      181 cgtcctcgtc catttcgggt cccgctcgtg ccattgttcc ccctcctcgg cgtgttcctt
      241 tgcatcgtgc tgatgctgag tctgccgctg gaaacctggg gccgtttctt tgtttggctg
      301 gcgatcgggc tctcgatcta tttcctttac ggggtgcgcc acagcaaact gcgccgcggt
      361 atcgacaccg gtataacgga agacattcct ccgccgacca tcaagacgta atcgtccata
      421 ttttagcggc actcattcca ctaaggccgt tgcttcgcga cgattccaat agggatgaca
      481 gatgagtcag taatcgaaaa tcagcagatt cccgtgaaca aactgaaggc aggctgggaa
      541 ctgctcaggc ttacgttcgc agaatggacg aacgacaacg ctttcgagtt gtctgctgcg
      601 ctcgcgtttt acacgatctt ctcaatcgcg cccgtgctgc tcatcgccgt gggcgtggcc
      661 agtttctttc tcgcgcccga cacggcgacc gatcagatcg tcggtgaaat ggaaaaaatg
      721 atcggtgcgc agggcgctaa tgcggtgcgg caggtgatcg attcatcccg cggatttggc
      781 aagggcctct gggcagtgag cgtcggaatt gtcacgctca tcatgggcgc gactgcggtt
      841 ttcggagaac tgcaatctgc gctgaatcag atttgggacg tcaaagcgaa accggaccgt
      901 ggtgtgatca tgtcgtttat tgtcgatcgg ttgcgctcgt tttcgatcgc catttgcgtg
      961 ggatttctcc tcctggtttc acttattatc agcgcgctca tcagcgggct tcaaaactac
     1021 atgaacaact ggttgcccgg catcccgtgg gtttggcaca tggcaaacgt cgtcgcctcg
     1081 ttcctcgtga tcgccgttct ttttgctgcc atctacaaat ttttgcccga cgtcgtgatc
     1141 tcgtggaagg acgtatggat cggagcggcg gtgacggcgc tgctttttac cggcggaaaa
     1201 tacgctatcg gtatttacct cggaaaaact gcgacggcga gtgcgtttgg agcggccggt
     1261 tcgctggtag tgctgctgtt ctgggtctat tactctgcgc tgatcagctt tttgggagcg
     1321 gagttcaccc aggtttacgc gcgccgctat ggtccaggca tccggccaca aaaacatgcg
     1381 gttcgcgtcg gccgtaagag cgattcgatc taatgtgaca aaggctgaga gcagtcgcat
     1441 aattttcaca tggtccaagt ctcagttaat tacaccgggg acttgcattg cgacgcgacg
     1501 cacggtccct cgcaggcaaa aatttccacg gacgcgccga gcgacaataa gggcaaaggc
     1561 gaagcctttt cgcctacaga tctggtcgcc actgctctcg ccacatgcat cagcaccacg
     1621 atgggaatta aggcagacga cctcggagtt gatctgcgcg gcatgactgt gtctgtgcaa
     1681 aaggagatgt cgaacgatgc gcctcgccga atcgttgctt tgccttcaga agttcacatc
     1741 ccgctcgcgc ccgatcatcc gcagcgggaa gtccttgagc aaaccgcgct caattgtccc
     1801 gtgcacaaga gcctcccggc agaaattcat cgcccgacca agtttttctg ggaagggtaa
     1861 cctcttcttg tcatgtcgag cggagtcgag acatctctgg atatttctgc ggcttcgcgc
     1921 atggagaaat aattcaagat tcctcgactc cgctcggaat gacagaggat tagattattc
     1981 cgggtataac cactggatat aatcgcgcac gccgtcttcg agcgagaacc gcggctcgta
     2041 tttgagcgct ttacgcgcgc tggtgagatc ggcttgcgtg aagttttgat aatgcgcgtg
     2101 cggattatcg aagtattcgg gctgaaaatt tgtccccaga catttattta gaacgtcgat
     2161 gagttcgtta aacgagcggg cctggcctgt cccaagatta taaattccgc tcgtctttgc
     2221 gtcgagcgcg caaatgctgc cttcaacggc atccttcacg tacacgaaat cgcgtttctg
     2281 ctcgccgagc ttgaagatgc gcggccgctt gccagtcttc atttgttgcg ccagatgata
     2341 aatcatgctt gcgggaacgc ccttgtgcgc ttcgcgcggt ccgtaaacgt tgaagtaacg
     2401 cagcccgacg atgatccagt ccggcgactc ggcagcagcg tgtcgggcga tattatccat
     2461 gatgaccttg gaaaaggcgt aaacgttcgc cggtgcggcc ccgtttgatt ccacgctcgc
     2521 ttcagtcgcc ggaccgtaag tcgccgcaga ggaagcatag atgattcggg tctttgtagg
     2581 gcgcgcaaaa ttcaaaagcc gtcggaaact ttccacgttg tcgtgcacct ggacgaattg
     2641 atcgtgcaaa gtcgtgtcgg tgatcgatgc gagatggaaa attgcgtcga atccggcagc
     2701 tgccggatca ccgaagtttt ctcgccaatc caatgtcgcc agattttcgg cgacgaaatc
     2761 tccgcgatag cctgccagat tcttgaaatc accggaccgg aaatcatcaa tcacagtgag
     2821 gtgcgcgtcc gggaattttt cctgcagcgc cagcgtgaga ttcgatccga tgaatccggc
     2881 accgccggtg atgatgaatc tgggcttgga tgcggttgtg gttttcgtca ttgaaagttt
     2941 gtagggcgtc tgtgtcagac gccgggcgtt tgccagttga ttaaataatc ttgacgctca
     3001 aagcgcaagc cgctagtcct cgtcccggtt ctttgcgagc ttgaaaaagt ggatcggcgc
     3061 aagaaatccc gtgagaatcg ggagcagttg cgctgctgta actggatacg acttcccatt
     3121 gggccaatcg ccgaaagcat ttcgggggtg aaggcgggaa gaaggtgaag ttagtcagaa
     3181 gttgatggtt gaaagttgat agtcaaagac gctccgcgtc tggtcctgtc aacaatccac
     3241 taaagactat caacctcttc aaaagccagg agccagaata tttgtccggt ccacctcatt
     3301 ctgtagccgt cgtgctgcct gccacgccgt agcaaggcga aggcgggtgc gcgacgcccg
     3361 cgcgtctcac agagacgcgg ctacagcaaa aacttcttcg cgaaaagaag aatgagagct
     3421 gggcgatgcg acgcttcgaa aacttcgaag tcctaacaag tccgactctc ggagttggag
     3481 gaaacttgtt atgcaaaatc gttcagtttg gtttctttgg ggtagcacat ccgtctcgga
     3541 tgctggtttc gacgtcgcgc cgaaacagtc tttccttaac gcgagaatct cgatcagagg
     3601 caacacagaa gaaaagtccg cgatcgtggg acgcgctcgc cagcacccga gacgggtgcg
     3661 ctacccaatc gtattcgctc cgctattcat cttcgcccaa atcgtttgtc acgcgcagga
     3721 agcgacgccg actttttcgc cgagtgaggc ggaggtggag tcagtcgtcg tttcagcgac
     3781 gcgtttcgat attccgctgg atcaatcgcc cgccagcgcg agcgtgatca gctcggagga
     3841 attggaacag aaacagatcc aacgcgtgag cgatgctttg cgtgaagtgc ctgggttgtc
     3901 cgtcgtgcaa accggcgtac ccggccagtt gacgtcggtg tttacgcgtg ggctgcgcag
     3961 cgaacacacg cagattttgc ttgacggcat tccgatcaat caaggtttac agggcgcatt
     4021 caactttgcc gacttcacta cggaagatat cgaccggata gaggtcgtgc gcgggccgca
     4081 aagcacgatt tacggaccac gcgcgcttgc gggtgtgatt caaatcttca ccaaacaagg
     4141 gactggaacg ccgggcgcga tgttcgccgc cgaaggtggc tcctacgaca cgtttcggga
     4201 atggtctcag agcgacggca aagtcgatga cttcgattat tcagtcgggg cgagtcatcg
     4261 cgacacggag aacgcgcggc cgaacaacaa ctaccgcaac acgaccgcga ttgccgacgt
     4321 cggctggtcg cctaacccgc cttcgcctgg gacgggctct gccgtggcga gcgagcaatt
     4381 gcgcatcgcc agtttgttca cttattcggt cagcgacatt ggactgccga atacaatt
//
LOCUS       DATDAJ010000382         3058 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2127064, whole genome shotgun sequence.
ACCESSION   DATDAJ010000382 DATDAJ010000000
VERSION     DATDAJ010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2127064"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VIS53_09570"
     CDS             complement(<1..982)
                     /locus_tag="VIS53_09570"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY5768070.1"
                     /translation="MPPTRPDILFIMTDQQRFDTIAALGNSHIYTPNMDRLVRRGITF
                     SNAYATCPVCVAARYTIRTGCESATTRVFTNAKANAASGQAVEMETRCGTYLGRTMSH
                     LGYRTFGVGKFHTNPWNEDLGFETMWRCEETYHPPNREGDDYGSWLAQEHPEFDFLEQ
                     PMGERTEMFYLPQRSPLPANLGGEWWTADRTVEEIAKSDDSRPFFGFVSFVGPHPPLA
                     PPIPFNRMYNPDRLPEPILGNIEEDHLDEEIPFMRHAIWADAVNPALTKIVKARYYGE
                     VSYLDYCLGRILDAVETRPNSENVLICFFSDHGDLLGDHHGWQKQNFFESA"
     gene            complement(1188..2084)
                     /locus_tag="VIS53_09575"
     CDS             complement(1188..2084)
                     /locus_tag="VIS53_09575"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEY5768071.1"
                     /translation="MQTPPQSSIDLQGIKKLRSGKVREVFDLGETLLFVVTDRISAFD
                     VILPDPIPYKGAVLNQISAFWFKRIDDIRNHFVTATFDEFPKELHPFREQLAGRSMIV
                     KKTKPLPVECVVRGYLAGSGWKEYQESQSVCGIKLPAGLKLASQLPEPIFTPATKAET
                     GHDENIDMKRCAEILGDELAARVKKLSLEIYSRGRAHADQCGIIVADTKFEFGTVGED
                     LLLIDECLTPDSSRFWPKDQYTVGQSPPSFDKQFVRDYLETLDWDKTPPAPRLPKDVI
                     EKSSAKYVEAFRRLTGSEIANS"
     gene            complement(2164..>3058)
                     /locus_tag="VIS53_09580"
     CDS             complement(2164..>3058)
                     /locus_tag="VIS53_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768072.1"
                     /translation="VWYWQVLAKMASGTPVESWYRVFNAPHPFPSHLPQAIGLLLVDA
                     LGVFAIVAPLLWLFVASRKMWQASEGIALAATAILLLMTFGMGGTGTSDNAHEFIHRP
                     FVWAYWLVGSLTAGRLFSILAARRPQLWTRGAVIGAIILTLVPVCYGSGLQRGKGSVG
                     NVRSSIRVDRGLIDCARHIRNQPPAHAVVQDSQLDKFLILGGLTDRPSFAARVDEWTR
                     QSKVFRESAYQEQLAKLQRLQQANNIPDLQRGVRETGIRWYVAHPDDPNVWPAEFRDQ
                     PAFQSNGYRVYDMQRVFDLRG"
BASE COUNT          722 a          840 c          833 g          663 t
ORIGIN      
        1 aggccgactc aaaaaaattt tgtttctgcc agccgtgatg gtcgccgagc agatcgccat
       61 ggtcggaaaa aaaacagatg agaacattct ccgagtttgg tcgcgtctcg acggcatcaa
      121 gaattcgccc gaggcaatag tccaaataac tgacctcgcc gtaataacgg gccttcacga
      181 tcttagtcag cgccggatta actgcatccg cccaaatggc gtgacgcatg aaaggaattt
      241 cttcgtccag atgatcttcc tcgatgttgc cgaggatcgg ctctggcaat cgatcgggat
      301 tatacatccg gttgaaggga atcggcggag ccagtggcgg atgcggcccg acaaacgaca
      361 caaatccaaa gaacgggcgc gaatcatccg actttgcgat ttcctcgacc gtgcgatcag
      421 ccgtccacca ttcgccgcct aaattcgctg gaagcgggct gcgttgcgga aggtaaaaca
      481 tctcggtccg ttcgcccatg ggttgctcga gaaaatcgaa ctccggatgc tcctgcgcca
      541 gccacgaacc gtagtcatcg ccttcgcgat ttggtggatg gtaagtttct tcgcagcgcc
      601 acattgtttc aaaacccaga tcctcattcc acgggttcgt atggaacttg ccgactccaa
      661 aggttcgata gccgaggtgc gacatcgttc ggccgaggta ggttccgcaa cgcgtttcca
      721 tctcgacggc ttgacccgac gcggcatttg ccttcgcatt agtaaaaacg cgggtcgtcg
      781 ccgactcgca tcctgtgcgg atcgtgtagc gcgcggccac gcaaaccggg caggtcgcgt
      841 atgcgttcga aaaagtgatt ccccttcgca ccagccggtc catgttcggt gtatagatgt
      901 gtgagttccc gagcgcggcg atcgtatcga accgctgctg gtcggtcatg atgaacaaaa
      961 tgtcaggccg ggtcggaggc atgatcgaaa tgtgccgagg actgaatttg gggcgccgct
     1021 agtttacaag gcgtctcgca attgtcattc cgagcgaagc ggtagcgaag tcgaggaatc
     1081 cagcggaaag acttttaggt ttaatcacgg gatgtctcca gccttcgcat aaagctacgg
     1141 cttggcaggc gacttcgctc gacatgacga gcggaaacca gagatgttta tgaatttgcg
     1201 atctcgcttc cagtcaggcg gcgaaacgcc tccacatatt tcgccgaact tttttcgatc
     1261 acatccttcg gcagacgcgg ggcaggggga gttttatccc agtcgagggt ttccagataa
     1321 tcgcgcacga attgcttgtc gaagctcggc gggctttgcc cgaccgtgta ctggtccttt
     1381 ggccaaaagc gcgacgaatc cggcgtcaga cattcgtcga tcagaagcaa atcttcaccg
     1441 acagtgccga actcaaattt cgtgtctgcg acgataattc cacactgatc ggcgtgtgcg
     1501 cggccgcgcg aataaatttc caggctgagc tttttcacgc gcgcggctaa ttcgtcgccc
     1561 agaatctcgg cgcatcgttt catgtcgatg ttctcgtcgt gaccggtttc ggctttggtc
     1621 gcgggggtga aaattggctc gggcaattgg gacgccagct tgagtcctgc cggcagctta
     1681 atgccgcaaa cgctctgcga ttcctgatat tccttccaac cggaaccagc tagataaccg
     1741 cgcaccacgc attccaccgg caacggctta gtcttcttta cgatcatcga ccgcccggca
     1801 agctgctcac gaaacgggtg caattccttc ggaaactcgt cgaacgttgc cgtgacaaag
     1861 tgattccgga tatcgtcgat tcgcttgaac caaaacgcgg aaatctgatt caacaccgcg
     1921 cctttgtacg gaatcggatc aggaaggatc acatcaaagg cggagattcg atccgtgacg
     1981 acgaagagca atgtctcgcc gagatcgaac acttcgcgca ccttgccact gcgcagtttt
     2041 ttaattccct gaagatcgat tgaagattgc ggaggtgttt gcatatgaga aacgcgaacg
     2101 ttcaacgttt gctggcgagc gtctagtaaa aacgacgtgc gacggcaaga gctccagcaa
     2161 aaatcagccg cgcaaatcga aaacacgctg catatcgtaa actcgatagc cgttggactg
     2221 gaatgccggc tgatcgcgga actcggccgg ccagacgttg ggatcgtctg gatgagccac
     2281 gtaccagcgg atcccggttt cgcggacgcc gcgctgcaga tctggaatgt tattggcctg
     2341 ctgcagtctt tgtagttttg ctagctgctc ctggtaggca gattctcgga agactttgct
     2401 ttgtctcgtc cactcatcga ccctcgccgc gaatgagggc cggtcggtta atcctccaag
     2461 gataagaaac ttgtccagct gcgaatcctg cacaacagca tgggcaggag gctgatttct
     2521 gatatggcgc gcgcagtcaa tcaggccacg atctacgcgt atgcttgaac gcacatttcc
     2581 taccgaccct ttaccacgct gtaatcccga gccataacac actggaacca gtgttaagat
     2641 gatagcaccg atgactgcgc cgcgggtcca aagttggggc cgacgggctg caaggatcga
     2701 aaacaagcga cctgcagtaa gtgagcccac cagccagtag gcccacacga aaggacgatg
     2761 tataaattcg tgcgcattat ccgaggtgcc ggttccaccc atgccaaaag tcatcaataa
     2821 cagaatcgct gtcgcagcca gggcgattcc ttccgacgcc tgccacattt tccgagacgc
     2881 gacgaagagc caaaggagtg gggcaacgat cgcgaagacg cccaaagcat caacaaggag
     2941 taacccgatc gcctgtggta gatgtgaagg aaatggatga ggagcgttga aaactcgata
     3001 ccaactttcg acaggtgtac cgctggccat cttcgccagt acctgccaat accaaacg
//
LOCUS       DATDAJ010000383         3220 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2128049, whole genome shotgun sequence.
ACCESSION   DATDAJ010000383 DATDAJ010000000
VERSION     DATDAJ010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2128049"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1492)
                     /locus_tag="VIS53_09585"
     CDS             complement(<1..1492)
                     /locus_tag="VIS53_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY5768073.1"
                     /translation="MIALKDNLGSEFVERVRGFFSENGPLSKAKNFEFRPQQQEMAAR
                     VAQALEEEQHLVVEAGTGVGKSLGYLVPSVLFALERHKKAIVSTHTINLQEQLLHKDI
                     PILKKVLPVEFEAALMKGRQNYLCPRRLERALQNEQELFTGPERSELQRLAEWARSTR
                     DGSLSDLSVEPDPKVWTQVCSEAHICTQKTCGQNPRCFYQQARKRLLAADVIVLNHTL
                     LFILLGSPDMQEERESGFLFPNDFIIFDEAHTVEQVASKQIGIGISQYGLRSTIQRLY
                     NARTRKGLFTVMRDAAGVRLAAELIDDVDRFFSAVESKSNFRKGREFRVRDVELVPDT
                     ITARLTALQARVADVVKRADDEILKAELQEFGRRIRDARDGISIFLEQSAPENVYWVE
                     RTGKTERFLALNAAPIDLAPVLRRMLFRDNCCCVMTSATLAVGRPDLSYFRARIGATE
                     VEPLQLGSPFDFHRQMKLFVVRKMPDPRDAGYSAALAQWVARFVEDT"
     gene            1751..2890
                     /locus_tag="VIS53_09590"
     CDS             1751..2890
                     /locus_tag="VIS53_09590"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY5768074.1"
                     /translation="MRLLDRYVIRNFVQVYFYCIAGFTSIWLIFDVSDNISSFIDNHI
                     PVSLVVRYYATQIPQVFIILLPVALLLSLLFALGRMSRSNEIVSMLTAGVSLPRVLLP
                     LIGIGLLTVAASMALNYSLAPHAELARKSFLSEAQSRPARNIQGQVFRNRTDLRTWFI
                     QNFRLGDNLFNNVQVLQQDAQDNIVIGYSAARAYFRPETKTWDLENVRLAYYDAAGNI
                     TKEEFRPALTIENWSETPFRLSSANVQAESLSVPELREYLHFNADFPPTLLAPFRTHF
                     QYRLALPWTCLVVVCIAAPLGIGYSRRGVLSSVAAAVILVFSNNFLVHLFLALGEGDR
                     VSAWIAAWTPNILFAGIGLYLLYLRASNREPPSFNLFAARRIVAR"
     gene            2887..>3220
                     /locus_tag="VIS53_09595"
     CDS             2887..>3220
                     /locus_tag="VIS53_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768075.1"
                     /translation="MNPLPNEWAIKHRANCCAVTQRPFVPGEYFYTLLYHGADGYRRE
                     DLSEEAWQSRNENIRPFSFWKSRYEPLPPKPTEPVPKESAEQLFRRLIASESPPANAC
                     YVLAAMLER"
BASE COUNT          661 a          929 c          866 g          764 t
ORIGIN      
        1 tggtgtcttc gacaaagcgc gccacccatt gcgcgagcgc ggcgctgtag ccggcgtcgc
       61 gtgggtccgg catcttgcgc accacgaaca gtttcatttg cctgtggaaa tcgaacgggc
      121 tgccgagctg caacggctcc acctccgttg cgccaattcg cgcgcgaaaa taggagagat
      181 cggggcgacc cacggccaga gtggcgctgg tcatcacgca acagcaattg tcgcgaaaga
      241 gcatccgtcg cagcaccggc gcgagatcga tgggcgcggc gttcagtgcg aggaagcgct
      301 cggttttgcc cgtgcgctcg acccaataca cattttctgg cgcgctttgc tccaggaaaa
      361 tcgaaatgcc gtcgcgcgca tcgcgaatgc gccggccgaa ctcttgcagc tccgctttca
      421 atatttcgtc gtccgcgcgt ttaacaacat cggcaacgcg cgcctgaagc gcggtcagcc
      481 gggcggtaat ggtgtccgga acaagttcga catcacgcac ccgaaattcg cggcctttgc
      541 gaaaattaga ttttgactcg actgccgaaa aaaatctatc aacgtcatcg atcagttccg
      601 ccgccagtcg caccccggcc gcgtcacgca tcacggtgaa aagtcctttg cgagtacgcg
      661 cattgtagag ccgttggatg gttgatcgca gtccgtattg cgagatgccg ataccgattt
      721 gcttcgatgc gacctgttcc accgtgtgtg cttcatcgaa aatgatgaaa tcattcggga
      781 acaggaaccc gctctcgcgt tcttcctgca tgtcgggcga tccaagtaag atgaacagca
      841 gcgtgtgatt gagcacgatc acatcggctg cgagcaggcg tttgcgggcc tgctgataga
      901 aacatcgcgg attttggccg caggtctttt gtgtgcagat atgcgcttcg ctgcacactt
      961 gcgtccaaac ttttggatcg ggctcaaccg acaggtcgct gagcgatcca tcgcgggtcg
     1021 agcgcgccca ttcggccaac cgctgcaatt cgctccgctc cggtccggtg aaaagttcct
     1081 gctcgttttg caacgcacgc tcaagccggc gcgggcacaa ataattttgc cggcctttca
     1141 tcaacgctgc ctcaaactcg accggcagca cttttttcaa gatcggaatg tctttgtgca
     1201 gcagttgctc ctgaagattg atggtgtgcg tggaaacgat tgcttttttg tgtcgctcca
     1261 gcgcgaacag caccgacggc accaggtacc ccagcgattt gcccacgcca gtgcccgctt
     1321 cgactaccag atgctgttct tcctccagcg cttgcgcgac ccgcgctgcc atttcctgct
     1381 gttgtggacg gaactcaaag ttctttgctt tggagagcgg gccgttctcg gaaaagaagc
     1441 cgcgaacgcg ttccacgaat tcgctgccca gattgtcttt cagtgcgatc atcggtgatc
     1501 aaacatcagg caccaacatc cacgctccag agaaacttca atcatcaaac cacacactcc
     1561 tggcatcatg tcatgttgag cgaagcgaaa catctctgat catcggattt gcgcgtagag
     1621 gacaaatatc tgagatcctt cgctccgctc aggatgacaa tcaggggtat cgctgcagca
     1681 tgaaatttga ggttgcccgc acttgaaccg aatttgactc cagtgtcagg gtcagcaccg
     1741 tggtcggtca atgcgacttc tcgatcgata cgtcattcga aactttgtgc aggtttattt
     1801 ttactgcatc gccggattca cctcgatctg gctgatcttc gacgtcagcg acaatatctc
     1861 gagtttcatt gacaaccata ttccagtatc tctggtggtt cgctattacg ccacgcagat
     1921 cccgcaggtg ttcattatcc tgctgccggt tgcgcttctg ctgtccctgc tttttgcgct
     1981 cgggcgaatg tcgcggtcga atgaaattgt ttccatgctc accgcaggcg tgagtcttcc
     2041 ccgtgttctg ttaccgctga tcggcatcgg tctgctgacg gtggcagcga gcatggcgct
     2101 caactactcg ctcgcgccgc atgcggagct ggcgcgcaaa tcgttccttt cagaagcgca
     2161 atcgcgtcct gcgcgcaata ttcaggggca agtctttcgc aatcgaaccg atttgcgcac
     2221 ctggtttatc cagaattttc gccttggcga caacctgttc aacaacgtgc aggtgctgca
     2281 acaagacgcg caggacaata tcgtcatagg ttattcggcc gctcgggcgt atttccgtcc
     2341 tgagacaaaa acgtgggatt tggagaacgt gcggctcgct tactacgatg ctgctggaaa
     2401 catcaccaag gaagaatttc gtcccgcgtt aacaattgag aactggagcg aaacaccgtt
     2461 ccgactgagc agcgcgaacg tgcaagcgga atccctgagc gtgccggaat tgcgcgaata
     2521 cctgcatttc aatgccgact ttcccccgac gttgttggcg ccatttcgca ctcatttcca
     2581 gtacagactg gcgttgccgt ggacgtgcct ggtcgttgtg tgtattgccg cgcccctcgg
     2641 gatcggctac tcgcgtcgcg gtgttttatc cagcgttgcc gctgcagtga ttctcgtatt
     2701 ttcgaataac ttccttgtac atctttttct cgcgctcgga gaaggagacc gggtctcggc
     2761 ttggatcgcc gcatggactc cgaacattct tttcgccgga attggtttgt atttgctcta
     2821 cctccgcgcg tcaaaccgcg aaccacccag ctttaatctg tttgccgcgc ggcgtatagt
     2881 tgcgcgatga acccgcttcc aaacgaatgg gcgatcaagc atcgcgcaaa ctgctgcgct
     2941 gtaacgcagc ggccgtttgt gcctggcgaa tatttttaca cacttctgta tcacggcgcc
     3001 gatggttacc ggcgcgagga tttgagtgaa gaggcgtggc aaagccggaa cgagaatatt
     3061 cggccttttt cattttggaa atcgcgctac gagccgcttc cgccaaagcc gaccgaacca
     3121 gtgcccaagg aaagtgcaga gcaactcttt cggcgtctga tcgcgtcgga gtcaccgcct
     3181 gcaaacgcct gctacgtcct ggcggctatg ctcgaacgaa
//
LOCUS       DATDAJ010000384         5308 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2128168, whole genome shotgun sequence.
ACCESSION   DATDAJ010000384 DATDAJ010000000
VERSION     DATDAJ010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5308
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2128168"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..1717)
                     /gene="purF"
                     /locus_tag="VIS53_09600"
     CDS             complement(182..1717)
                     /gene="purF"
                     /locus_tag="VIS53_09600"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEY5768076.1"
                     /translation="MNPPQSDGLFGVISPSNRPDPDQMPDSAVLPQHECGLFGVFGHP
                     NAAVLTYYGLFALQHRGQESAGIVSSNGPGTSFLMHKDMGLVSQVFGQDELARLKGTR
                     ALGHTRYSTTGTSTIKNAQPFVVDCVRGQMAIAHNGNLINADILRDELERRGSIFQTT
                     ADSEIILHLLAQPSDNGGNVLAALRRVEGAFSLLIMSERELIAVRDPFGWRPLSLGKI
                     DGAYVLASETCAFDLIHAEFIREVEPGEVLIINEHGLRSERPFPDARPAFCMFEYVYF
                     SRPDSIMGGVNVGKVRTEMGRELARRFPVKADIVVPVPDSGNYAALGFAEELKIPFAH
                     AFVRNHYIGRTFLQPTQLIRDFDVRVKLNLIKEMVAGKRVVVVDDSIVRGTTSRARVV
                     NLREAGAKEVHMRVSCPPHRFACHYGIDFPDPEKLIANQMSMEDICKYLGVDSLGYLD
                     VEGMVRATGKPLNSFCLACFNGDYPLPVDPALDKFIMERREQRAKALADQEAQPTLFT
                     DLK"
     gene            complement(1735..4116)
                     /gene="purL"
                     /locus_tag="VIS53_09605"
     CDS             complement(1735..4116)
                     /gene="purL"
                     /locus_tag="VIS53_09605"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEY5768077.1"
                     /translation="MTSKTPHADPVVTLELVKQHGLTPEEFEQIKKILGREPNFTELG
                     IFSVMWSEHCSYKNSRKELKKFPTTGANILVKAGEENAGVVDIGDGWAVAFKIESHNH
                     PSAIEPFQGAATGVGGIIRDIFTMGARPEFCLNSLRFGPISQSNIKHQTSNIAANRRL
                     FTGVVSGIAHYGNCVGIPTIGGEIHFDESFDGNPLVNVFCLGVLRHEELARGTAEGAG
                     NPVFYVGAETGRDGLAGAAFASRELTEQSREDRPAVQVGDPFKEKLLLEACLELIARD
                     AVAGIQDMGAAGLTCSTCETASRGGSGIEIDLAKVPRREPGMTPYEIMLSESQERMLI
                     IAKRGREDVVRQVFDKWDVPCAEIGHVTSDGIMRVRNNGTIAAEIPAKALADEAPLYS
                     RDAKSPAGAASLRDVRSSLTERRLQEIDVHESLRQLLGDPTIASKNWVYRQYDHTVRT
                     GTVVKPGSDAAVYFVRYANKILAATTDCNSLYCALDPREGGKIAVAEAARNLTCSGAR
                     PLAVTDCLNFGNPYKPENFWQLREAIEGVAEACRKFGTPVTGGNVSLYNESPLGVVDP
                     TPTIAMVGLIDDEKHITTQWFKDEGDVIILVGNVAAISDARSENELLGGSRYLKVCHG
                     LKIGPPPHVDLAHEIKVQDAVRDLIREGLVQSAHDCSEGGLAVTLAESCFNPERLFGA
                     KIDCSRRPVGDVKQTEETNPTDAPHSEAATVLFNESQSRIVMSVTPENLDKAITMLRE
                     RDVPFQQLGKVGGDELQIRIDEQTFRWRVAEIYDQWWNAIGRAVEQDESIPSL"
     gene            4286..4636
                     /locus_tag="VIS53_09610"
     CDS             4286..4636
                     /locus_tag="VIS53_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768078.1"
                     /translation="MKKTIIALVCGLVAPLAFAQTSTTTTEETTTSTKPSTTTTTSTT
                     YETGTVSTYEPGKTIVVRGEQGPVSFALGTAANIVDAAGKVVTAPLRAGQKVRVYYTG
                     PTERRTVERVIVEE"
     gene            4789..>5308
                     /locus_tag="VIS53_09615"
     CDS             4789..>5308
                     /locus_tag="VIS53_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY5768079.1"
                     /translation="MAFDLKEIVASRLGENYELHERHINRTLVAAQRVIGFDKVYARA
                     EGAYLYDMDNQPYLDFLSGYSVFNIGRNHPLVKQAIRDVLDLDLPNMVQMDCSLLSGL
                     LAEALVKRMPPHLNAVFLCNSGTEAMEGALKFARAATGRQRVVSLASAFHGLTLGSLS
                     LMGCESFTDGFGP"
BASE COUNT         1156 a         1523 c         1431 g         1198 t
ORIGIN      
        1 agtacttgcg ggccatgcgt ttgcctaacg agtgattgga tgccgcgctt gagtttatta
       61 ccaagatcga catcaacgcc cgcgcgcgcg taagcttttc ccttcttagt catttctgta
      121 gggggaagct gtcagcttcc ctcgggaagg caacgccttc ccctacaaaa aagccggcgc
      181 gctacttcag gtcggtgaac aatgtgggct gtgcttcctg gtcagccagc gctttggcgc
      241 gctgctcgcg gcgttccata atgaacttat ccagcgccgg atcaaccggc aggggataat
      301 cgccgttgaa acaagcaagg caaaaactgt tcaaaggttt tcccgtcgcg cgaaccatcc
      361 cttccacatc cagataaccg agactgtcca ccccgagata tttgcagatg tcctccatcg
      421 acatctggtt cgcgatcaat ttttcagggt cagggaaatc gatgccgtaa tgacacgcga
      481 accgatgtgg aggacaacta acccgcatgt gcacttcttt tgcaccagcc tcgcgcaggt
      541 tcaccacgcg cgcacgcgag gtggtgccgc gaacgattga gtcatccaca acgactacgc
      601 gttttccagc caccatttcc ttaatcaaat tcaacttaac gcgcacatcg aaatcacgaa
      661 tgagttgggt cggctgcaaa aatgtgcggc cgatgtagtg gttccggaca aacgcatgcg
      721 cgaaaggaat ctttagttcc tcagcaaaac cgagagcggc gtagttccca gagtcgggca
      781 cgggcaccac gatatcggct ttgacaggaa atctgcgcgc cagttcgcgc cccatttccg
      841 ttcggacttt tccgacgtta acgccgccca tgatgctatc cggccgcgag aaataaacgt
      901 attcgaacat gcagaatgcg ggacgcgcat ccgggaaggg ccgttccgag cgcaatccgt
      961 gttcattgat gatcagcact tcgcccggtt ctacctcgcg gatgaactcg gcatggatca
     1021 gatcgaacgc gcatgtttca gacgcgagca catatgcgcc atcgattttt ccgagggaga
     1081 gcggccgcca gccgaaagga tcgcgaaccg cgatcagttc gcgttcgctc atgatcaaca
     1141 gcgaaaaagc gccctcaacg cgacgcagcg ccgccaggac atttccaccg ttgtccgaag
     1201 gctgcgcgag aaggtgcaaa ataatttcgc tgtcggcggt agtctgaaaa atggaacccc
     1261 gtcgttccag ctcatcgcgc agaatgtcgg cattaattag atttccgtta tgcgcgatag
     1321 ccatctggcc gcgcacgcaa tcgaccacga agggttgcgc attcttgatc gtgctggtgc
     1381 ccgtcgtcga gtaacgcgtg tgcccgagcg cgcgtgtgcc cttcagcctt gccagttcgt
     1441 cctgaccaaa aacctgcgac accagaccca tgtccttgtg catgagaaag ctggtccccg
     1501 gcccattgct tgagacaatc ccggcgctct cttgtccacg atgctgcaat gcaaacagac
     1561 cataatacgt cagcaccgcg gcgttcggat gaccgaacac gccgaaaaga ccgcactcgt
     1621 gctgcggcaa aacggccgag tcaggcatct ggtccgggtc cggtctgttc gaggggctga
     1681 tcacaccaaa taatccatca gattgaggcg gattcaatcg ctccttttac cgattcataa
     1741 gctcggaatg ctttcgtctt gttcaacagc gcgcccaatc gcgttccacc actggtcgta
     1801 aatctctgca actcgccagc gaaaggtttg ttcatcgatc cgaatttgga gttcgtcgcc
     1861 gccgactttc ccaagctgct gaaatggaac gtcgcgctcg cgtaacatcg tgattgcctt
     1921 gtcgaggttt tcgggcgtga ccgacatgac gattcgagac tgtgattcgt tgaacaatac
     1981 tgtagccgct tcgctgtgcg gagcgtcggt cggatttgtt tcctccgttt gcttcacgtc
     2041 gcccacagga cgacggctac agtcgatctt cgctccgaac aaccgttcgg gattgaagca
     2101 agattcagcg agcgtcacgg caagtccgcc ctcggagcaa tcgtgcgcgc tctgcacgag
     2161 accttcacga atcaaatcgc gaacggcatc ttgcaccttg atttcatgtg cgagatcgac
     2221 gtgtggtggc ggaccgattt ttaatccgtg gcacaccttc agataacgcg acccgcctaa
     2281 caactcattc tcacttcggg cgtcagaaat cgccgccaca ttgccgacga gaatgattac
     2341 gtcaccttcg tccttgaacc actgcgtcgt aatgtgcttt tcatcgtcga tcagtccgac
     2401 catcgcgatt gtcggcgttg gatcaacgac gccgagaggg ctctcattgt acaacgagac
     2461 atttccgcct gtaacgggcg ttccgaactt ccggcaggct tcggctacgc cttcaatggc
     2521 ttcgcgtaat tgccagaaat tttccggttt gtacggattg ccgaaattca ggcaatccgt
     2581 gacggccaac ggtcgcgcgc cggagcaggt gagattgcgc gccgcttcag cgacagcaat
     2641 tttgccgccc tcacgtggat caagcgcgca gtagagtgaa ttacaatcgg tggtcgcggc
     2701 gagaatcttg ttcgcgtaac gaacgaaata taccgcggca tcggagccgg gtttcaccac
     2761 ggttcccgtg cgaactgtgt gatcgtactg ccgatacacc caatttttgg atgcaattgt
     2821 tgggtcgcca agaagctgcc gaagagattc gtgcacatcg atttcttgta gccgtcgctc
     2881 tgtgagtgac gagcgcacgt cccgcaggga cgcggctcca gcgggcgact tcgcatcgcg
     2941 cgaatagaga ggcgcttcgt cagcgagggc tttcgctggg atttccgctg caatcgtgcc
     3001 gttgtttcgg acgcgcatga tgccgtcgct cgtgacgtgg ccgatttccg cgcacggtac
     3061 atcccacttg tcgaacacct gacgaaccac atcttcccga ccccgcttcg caatgatcag
     3121 catgcgttcc tgcgattcgc tgagcatgat ttcatacggc gtcatgcctg gttcgcgtct
     3181 tggtactttg gccagatcga tttcgatacc gctgcctcca cggcttgcgg tttcgcatgt
     3241 tgaacaagtc aggccggccg cgcccatgtc ttgaattccg gcaactgcgt cgcgagcgat
     3301 cagttccaag catgcttcga gcagcaattt ttccttgaac ggatcgccga cctgcaccgc
     3361 aggacgatct tcgcgcgatt gctcggtcaa ttcgcgggag gcaaacgccg cgccggcgag
     3421 gccgtcacga ccggtttcag cgccgacata gaaaacggga tttccggcgc cttccgcggt
     3481 gccgcgcgcc agttcttcgt ggcgcaacac gccgaggcaa aaaacgttta ccagcggatt
     3541 gccatcgaaa ctctcatcga aatgaatctc gccaccaatt gtcggaatgc ccacgcaatt
     3601 tccgtaatgc gcgatgcctg atacgacacc ggtgaagagc cgcctgttgg cggcgatgtt
     3661 tgatgtttga tgtttgatgt ttgattgact gatcggcccg aaacgtaagg agttcaggca
     3721 aaactccggg cgcgccccca tcgtaaaaat gtctcgaatg attccaccaa cacctgtggc
     3781 tgcgccctga aaaggctcga tcgcgctcgg gtgattatgg ctctcgattt tgaacgcgac
     3841 tgcccaaccg tcgccaatgt cgaccacgcc cgcgttttct tcgccggctt tgaccaggat
     3901 attcgcgccg gtcgtgggaa acttcttcag ttctttcctt gagttcttgt acgagcaatg
     3961 ctcgctccac atcacggaaa aaatacctag ctcggtgaag ttcggctcac gtccgaggat
     4021 tttcttgatc tgctcgaatt cttccggcgt aaggccgtgt tgtttgacca gttcgagtgt
     4081 aacaactgga tcggcgtgcg gtgttttgct cgtcattagt gtcccatgtt accgaattcg
     4141 taacgcccac tcaaatcgcc gaaatgacag accatctcga ataatgcgtt gcctgcgccg
     4201 tcaacatata gaacggacct gaaacgtccg cttaacgcct gagtcacgaa cttgggataa
     4261 acctaatcaa caaggaggca tcagagtgaa gaagacaatc attgctttgg tctgcggact
     4321 ggttgcgcca ttggcgtttg cacaaaccag cacgactacg accgaagaaa ccacaacgtc
     4381 gacaaaaccg tcgaccacaa cgactacgag cacaacttac gagacgggca cggtaagtac
     4441 atacgagccc ggcaagacga ttgtcgtcag aggcgagcag ggcccggtaa gtttcgctct
     4501 cggcacggct gcgaacattg ttgacgcggc tggcaaagtt gtgacggcac cattgcgagc
     4561 cggccaaaaa gtccgggttt attacaccgg gccgacggag cgtcgcacgg tcgagcgtgt
     4621 gatagtcgaa gaataagcga agctgaattg gcaaaattga gctgcaggat tcgctctgaa
     4681 tcctgcagct ttttctttat cgtcgctcga cgagccacga gcgcttcgtg cagcgtagcg
     4741 gctacaggat ttgcgttccg aacgcgaatc gctgaagttt tcttcctcat ggctttcgat
     4801 ctgaaggaga ttgtcgcctc gcgtctcggc gaaaactacg aactgcacga gcggcacata
     4861 aaccgcacac tcgtggcagc gcaacgcgtc atcggtttcg acaaagtcta tgcgcgcgcc
     4921 gagggcgcgt atctctacga catggataac cagccgtatc tggattttct gagcggctac
     4981 agcgttttca acatcggtcg aaatcacccg ctggtgaagc aagcgatccg cgacgtgctt
     5041 gatctggatc ttccaaacat ggtgcagatg gactgttcgc ttctgagcgg cttgctggct
     5101 gaggcccttg tgaaacggat gccaccgcat ctaaatgccg ttttcctttg caactccggc
     5161 accgaggcaa tggaaggcgc tctcaagttc gcgcgcgctg cgacgggacg acaacgcgtt
     5221 gtgtcgttgg cgagcgcatt tcacggtctg acattgggtt cattgtcgct gatgggctgc
     5281 gaaagtttta ctgacggctt tggcccgc
//
LOCUS       DATDAJ010000385         2776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2138003, whole genome shotgun sequence.
ACCESSION   DATDAJ010000385 DATDAJ010000000
VERSION     DATDAJ010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2776
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2138003"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /gene="pcm"
                     /locus_tag="VIS53_09620"
     CDS             <1..273
                     /gene="pcm"
                     /locus_tag="VIS53_09620"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: protein motif:HMM:NF013315.4"
                     /note="catalyzes the methyl esterification of
                     L-isoaspartyl residues that are formed in damaged
                     proteins; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEY5768080.1"
                     /translation="YKNVHIKVGDGYKGWPAEAPFDAIIVTCAPENVPQPLVDQLKDG
                     GRIVIPVGERFAQQLYLLEKKNGQLKESATLPVRFVPMLREGQKQN"
     gene            complement(417..974)
                     /locus_tag="VIS53_09625"
     CDS             complement(417..974)
                     /locus_tag="VIS53_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768081.1"
                     /translation="MKSTGHVCSLARAGFFSLMFVALGVGASRAQNEPMLVPDAIDYQ
                     KLLPILPEPPSGWTADKPEGSTEDVGGFKITNVHRDYRKGEGEKAPSTAISILDSVAN
                     PDYVSATTEAWKSNSDTSEGYAKSVTIDDNPGFETFEKDTRHAALWLMIAGRYFVQIE
                     LQNQEPGELQDWIKRIDLKKLAAIK"
     gene            1095..2609
                     /locus_tag="VIS53_09630"
     CDS             1095..2609
                     /locus_tag="VIS53_09630"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY5768082.1"
                     /translation="MTSPTNVVRRTTATDAAPKIVLVICLLAVAARLVFINQAYVDHW
                     SWRQSDVAAIARNFLQNGFRFGYPQIDWAGNAPGYVGTEFPILPFIAAVCYKFAGVHE
                     WIGRIQAVILFAVSLPFFFFLVREIFGSTAAVWASFFYCFTPLNVFAGRSFMPDVPSL
                     SFAIVGLYFFLRWIQHGGSWPCFVAAIAISLSLLIKITSIVILAPLVYIVVGRLCQTP
                     GVSQKRPAIFDVILFAAIALFPSAIWYWHAHQIAQKFYPHHFFGAGGIRIESFSWYWH
                     IAQQTLVSSLTPLLSLMALVGLLVPQSRDRRYSRLFHWWLAAMIVFIIIVGYGNRHRW
                     YQLPLVPIAAAFAGAACAFVRSKISSRLAAVTSSIVLAVAFLVLAFVYVRPFYESSAA
                     QLRDAGLELKKVTPTDALIVAADMGDPAIFYYAERKGWHFPEQNAIYNGTPDDSEQAI
                     ENLERLRRRGATHFVFTRNTFWWLQSYPEFAAHLTNNATLIEATSESRIYELTP"
BASE COUNT          537 a          774 c          748 g          717 t
ORIGIN      
        1 tacaaaaacg tgcatatcaa ggtcggcgac ggttacaaag gctggcccgc agaggcgccg
       61 ttcgatgcca ttatcgtgac ctgcgcgccg gagaacgttc cgcaaccgct tgtcgatcaa
      121 ctcaaagatg gcgggcgcat agtcattccc gtcggcgaac gattcgccca gcagctttat
      181 ctgctcgaaa agaaaaacgg ccagttgaaa gaaagcgcca cgctcccggt tcgctttgtg
      241 ccgatgctgc gcgaagggca aaagcagaat tgatcagtga tgtgtgaacg gtgaacggaa
      301 tcgcttcgtc actgaacgcg gactgatcgc ggatcacaga tcagagatca cggatcaccg
      361 atcgctggca aattcccgag atccttcgct ccgctcagga tgacaagctg cgcttgtcac
      421 ttgatcgctg ccagtttctt caggtcaatg cgcttgatcc agtcttgcaa ctcgcccggt
      481 tcctgatttt gcagctctat ctggacgaaa taacgaccgg cgatcatcaa ccacagagca
      541 gcgtgcctgg tgtctttttc aaatgtttcg aaaccggggt tgtcatcgat cgtcaccgat
      601 ttggcgtagc cttcgctggt gtcgctgttg ctcttccacg cttcggtcgt agcgctgaca
      661 taatcagggt tcgcaactga atcgagaatg ctgatcgcgg tgctcggcgc tttctctcct
      721 tcgcctttgc gataatcgcg atgcacgttc gtgattttga atccgcccac gtcttcggtc
      781 gagccctccg gcttatcggc cgtccaaccc gatggaggct ccggcaggat cggcaataac
      841 ttttgataat cgatagcgtc aggcacgagc atcggttcat tctgtgctcg cgacgcgccg
      901 accccaagtg ccacgaacat cagcgaaaaa aatccggcgc gtgccagaga acaaacatga
      961 cccgttgatt tcatgtgagc gcgtcctgcg cgattactct acccgattga ctttacctct
     1021 actgtcaaga cgcttgcggg atgcgcatat ccgagcgcgt tcactgcagc cgctttcctg
     1081 tggaaagcgc tgccttgaca agcccaacga acgtcgtccg caggacgacg gctacagatg
     1141 cagcgccgaa gatcgtattg gtaatctgcc ttctcgctgt cgcggcgcgg ctggttttca
     1201 tcaatcaggc ttacgtcgat cactggagct ggcggcaaag cgacgttgcg gcgatcgcgc
     1261 gcaatttttt gcagaacgga tttcgtttcg gctatccgca gattgattgg gcaggcaatg
     1321 cgcccggtta cgtcggaacg gaatttccaa ttttgccctt catcgcggcg gtttgctaca
     1381 aattcgcggg tgttcacgaa tggatcgggc gaattcaggc ggtcattttg tttgcggttt
     1441 cgttgccatt tttctttttc ctcgttcgcg agatctttgg aagcacggca gcggtctggg
     1501 cgagtttctt ttattgtttt acgccactaa atgttttcgc cggtcgttcg ttcatgccgg
     1561 atgttccgtc gcttagcttc gctattgtcg ggttgtattt ttttctgcgc tggatccagc
     1621 atggtggatc ctggccctgc ttcgtcgccg ccatcgcgat ttcgctgtcg ttgctcatca
     1681 agatcacgag catcgttatc ctcgcgccgc tggtgtacat cgttgtaggg cgtctgtgtc
     1741 agacgccagg tgtttcacag aaacgccctg caatttttga cgtaattctt ttcgcagcga
     1801 tcgcgctatt tccgtctgcg atctggtact ggcatgccca ccaaatagcc cagaaatttt
     1861 atcctcatca cttcttcggt gccggcggga ttcgcatcga atctttctcg tggtattggc
     1921 acattgcaca gcagactttg gtatccagtc tcacgccgct gctctcactc atggcgctcg
     1981 tcggtttgct cgtcccgcag tcgcgggatc gaaggtactc gcgccttttt cattggtggc
     2041 tggctgccat gattgttttc atcatcatcg tcggctacgg gaatcgccac aggtggtacc
     2101 aacttcccct ggtgccgatt gccgctgcat ttgcaggcgc cgcttgcgcc tttgttcgct
     2161 ccaaaatctc ttcgcgtttg gctgcagtca catcgtcaat cgtgctcgcc gtcgccttcc
     2221 tagtccttgc cttcgtctat gtccgaccat tttatgaatc atctgcggcg caacttcgcg
     2281 atgcaggtct ggaattgaaa aaagtgacac cgaccgatgc attgatcgtc gccgcggata
     2341 tgggcgatcc ggccatcttt tattatgccg aacgcaaggg ctggcatttt ccagagcaga
     2401 acgcgattta caacggcacc ccggacgaca gcgaacaggc aatcgagaat cttgagcggt
     2461 tgcgtcgccg cggagcgaca cattttgttt tcaccaggaa tactttttgg tggctgcagt
     2521 cgtatccaga gtttgccgcg catctgacga ataacgcgac actgattgaa gcgacgtctg
     2581 aatctaggat ttacgagctg actccctaaa aggtgacaag atctctatcg tatcaggcgg
     2641 tggatggttc ctctgcccag gccgacggcg gcctggctcc agggccacgc gttcttcggc
     2701 gagtgttgga gagggcctgc cctcacgccg cgattcgtgc tcgtggaggc gatggggcgt
     2761 agcagaaagc tagtca
//
LOCUS       DATDAJ010000386         3200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2138052, whole genome shotgun sequence.
ACCESSION   DATDAJ010000386 DATDAJ010000000
VERSION     DATDAJ010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3200
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2138052"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..561)
                     /locus_tag="VIS53_09635"
     CDS             complement(274..561)
                     /locus_tag="VIS53_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768083.1"
                     /translation="MLHPTEYELAVNYFLEEFAGDVAFVRGSEPEQMPHLAVLNIVVS
                     KAMGRHVEIANTLVSYLREHCFVHGNAQADGHVVLFFYFEDADTGLLMLIP"
     gene            complement(620..1123)
                     /locus_tag="VIS53_09640"
     CDS             complement(620..1123)
                     /locus_tag="VIS53_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768084.1"
                     /translation="MNAENLINRFIRSRWVSLPVVALFFLSGRFVNAEPVGDFFKKVG
                     QSVSKAFQPQPTPNPTNKKTTKRASRRPTSPHSNLVGASPTPLERPTNLVKEEKVTPA
                     VTVLRAVSVPPDKAKGDLPYGIPVPDHKGMVTSPYSPEGNYIDVSAFAPESAVRDPYT
                     GKIFLVP"
     gene            complement(1204..1686)
                     /locus_tag="VIS53_09645"
     CDS             complement(1204..1686)
                     /locus_tag="VIS53_09645"
                     /EC_number="5.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase family protein"
                     /protein_id="HEY5768085.1"
                     /translation="MKHLALIFSIPLLLATYANAAPVVFIVRHAEKVSTGGKDPDLSV
                     QGQKRADALAHILKDSQITSVFVTEFKRTQETAAPTASATHVSPTVVPANDLGALVEK
                     LRDLNGNALVVGHGNTIPDLLRAFGIATPVSIPEDDYTEIFAVVGGDAPQLLRLHYPF
                     "
     gene            1890..2918
                     /locus_tag="VIS53_09650"
     CDS             1890..2918
                     /locus_tag="VIS53_09650"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY5768086.1"
                     /translation="MNTTSPTPDAILQTAFGFWNSKVLLTAVTLDLFTALGQRRLTGA
                     EIGKKLELHPRGVADFLDALVAMKFLKREGDGADAKYFNTPETALYLDRNSPRYIGGI
                     PEMLNARLFKYWNDLPEALRTGKPQNETKHGGKNIFDELYADPEKLECFLDGMTGLSR
                     INFEALADKFDFSRYCSLCDVGGATGLLCIEVAKKHPHIECISFDLPPVEPVAAKHIA
                     AAGLTDRNRTATGDFFQDPLPKADVITMGMILHDWNLEKKMKLIGAVYDALPAGGAFS
                     AVEALIDNARRENVFGLLMSLNMLIEFGDAFDYSAADFEKWCREVGFKRFEVIHLAGP
                     SSAAVAYK"
BASE COUNT          750 a          876 c          826 g          748 t
ORIGIN      
        1 attccagtca ggcaagtcaa agacttttgg tcgtgcgaaa agattctcaa cattgaacga
       61 cgcgactctg atcatagaga tggcacctcc tgcgacggtt tgggcgtgtt ccaatgttca
      121 tagctcgatt gagtgccatt gggcaagctc ggttgaactt ggatttcttg cgattcacgc
      181 ggcagccggg gtgtcggtgt gcaatcaatt ccaccgcggg tcgggcagcc cgcctttcag
      241 atggaaccgg gcaacttcca tctggccgcg aattcatgga atcagcatga gcagccctgt
      301 atctgcatct tcaaaataaa agaacaacac aacatgcccg tccgcctgcg cgttgccatg
      361 cacgaagcaa tgttctcgca aatacgatac caacgtgttc gcgatttcca cgtgacgccc
      421 catggctttg gagacaacga tatttagcac cgccagatgc ggcatctgtt ccggttccga
      481 acctcgcaca aacgccacat cgcccgcgaa ctcctccaga aaataattga cggccagctc
      541 gtattctgtc ggatgcagca tccgctcgcg cagcataccc agatgatgcg gaaaattgcg
      601 acgcggaatt cctgctgcct cacggcacca ggaagatttt tcctgtgtat ggatctctca
      661 ccgcggattc tggcgcaaag gcgctgacgt caatgtagtt tccctcgggt gaataaggac
      721 ttgtgaccat acccttgtga tcgggcaccg gaattccata cggcaaatct ccttttgctt
      781 tgtctggagg caccgataca gcgcgcaaca cagtgacggc aggagtaacc ttctcttctt
      841 taacgaggtt tgttggccgt tcgagtggag tcggggacgc cccaacaaga tttgagtgcg
      901 gtgaagttgg ccgccgagaa gcacgctttg tcgtcttctt gttggttgga tttggcgtgg
      961 gctgaggctg gaaagccttc gaaacagact ggccgacctt cttaaaaaag tccccaaccg
     1021 gctccgcgtt tacgaatcgt ccgcttaaaa aaaacagcgc gaccactggc aacgaaaccc
     1081 agcgcgaacg aataaaacgg ttaattaagt tttcggcgtt caatgtgaat acaggatttt
     1141 ccgtcaggat cggggtctaa gagaaggaaa aattttgctg cacggaaact tttggcgtct
     1201 ttatcaaaac ggataatgca accggagcaa ctgtggtgca tcgccaccca ccacggcaaa
     1261 gatttcggtg taatcgtcct cgggaatgct gaccggcgtc gcgatcccaa acgctctgag
     1321 caagtccgga atcgtgttgc catgtccgac gacgagcgcg ttgccgttca aatcacgcaa
     1381 tttctcgaca agtgccccaa ggtcatttgc cggaaccact gtcggactga catgcgttgc
     1441 gctcgctgtc ggtgccgcag tttcctgcgt gcgcttgaat tcggtaacaa atacggatgt
     1501 aatctgcgaa tccttcagga tatgcgccaa ggcatccgca cgtttttgtc cttggacaga
     1561 taaatcagga tctttaccgc cggtgctcac tttctctgcg tgacgaacga tgaaaacaac
     1621 cggtgcagcg ttcgcgtagg ttgcaagcaa caggggaatc gaaaaaatca aagcaaggtg
     1681 tttcattcta aaaaaactaa tcgcggaaag cctattgatg acagctgacg ggaattaatc
     1741 gtgcaatcga cgtaattggc cgtacatttc ttcctcgcca gttcgcactc ccctctcccg
     1801 attcgactca caacgagcgc aagctaccaa ttgttttcga tgcactcgtc acttgtgact
     1861 cctcgcagat tggctagatc gacaaccgta tgaacacaac ttcgccaaca cctgacgcaa
     1921 ttctacaaac tgcgttcggc ttctggaatt ccaaggtcct gttgacggcg gtcacgctcg
     1981 atttattcac cgcactcggt cagcgccggc ttacgggcgc agagatcggc aaaaaacttg
     2041 aactgcatcc tcgcggcgtc gcagatttcc tcgatgcgct cgtggcaatg aaattcctga
     2101 aacgtgaggg tgacggcgcc gacgcgaaat atttcaatac acccgaaacc gctctctatc
     2161 tcgaccgcaa tagtccacgc tacatcggcg gaattcccga gatgctcaac gcgcggctgt
     2221 tcaagtattg gaatgatttg ccggaagcgc tccgcaccgg gaagccgcaa aatgaaacca
     2281 aacacggcgg caaaaacata ttcgatgaat tgtatgcgga tcccgaaaag cttgagtgct
     2341 tcctcgacgg gatgaccggc ctgtcgcgca tcaacttcga agcgctcgcc gacaagttcg
     2401 atttctcgcg ctattgcagc ctgtgcgatg tcggcggcgc gactggattg ctctgcattg
     2461 aggttgccaa aaaacatccg catatcgagt gcatcagttt tgatctaccg ccggtcgagc
     2521 ctgtagcggc aaaacacatt gccgccgccg ggttaactga tcgaaaccgc actgcgactg
     2581 gcgatttctt tcaggaccca ctgccgaaag ccgacgtgat cacgatggga atgattctgc
     2641 acgactggaa cctggagaaa aagatgaagc tcatcggtgc ggtttacgac gcgcttccgg
     2701 ccggcggcgc atttagtgca gtcgaagcgc tgatcgataa tgcgcgtcgc gagaatgttt
     2761 ttggtctgct tatgtcgcta aacatgctga tcgaattcgg cgacgcgttc gattactcgg
     2821 ccgccgattt cgaaaaatgg tgccgcgaag taggcttcaa gcgcttcgag gtcatccatc
     2881 ttgccggccc atccagcgcc gcggtcgcgt acaagtaggt agggcgggta atcctttgca
     2941 cgccgaaaag gcggcgccca caggagtggt cgccctacct gcaatgcgtc attgcgactt
     3001 ctcccactgt cgcttttccg ttttctgctt tcctgttttc cctggttggc taaatcatcg
     3061 gttggtcgca gttaggctgt tgaggtcaac agcccctacc tatttcaatc ggcgtttgaa
     3121 tctcgacccc gacttgacac cgattctcgc ggcgtatatg gcattgcaat atatggcatc
     3181 gccagttcca gatcgcgaat
//
LOCUS       DATDAJ010000387         5353 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2140636, whole genome shotgun sequence.
ACCESSION   DATDAJ010000387 DATDAJ010000000
VERSION     DATDAJ010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5353
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2140636"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..777
                     /locus_tag="VIS53_09655"
     CDS             <1..777
                     /locus_tag="VIS53_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY5768087.1"
                     /translation="IVFRVINSYVRTMDDLGLPQQLKLLTRYQNGLILATGSVGTGKS
                     TTLAAMVQQVNIERHDHIITLEDPIEYVIHSNNCHVSQREVFTHTESFATALRAALRE
                     DPDVIMVGEMRDLETISLAITAAETGHLVLATLHTSNASRTLDRLLDVFPPEQQEHVR
                     VMVAESLRGVVSHQLIPRKDGKGRVLALEILTNTLAVANVIRENKTFMLPGIIQTGKK
                     QGMRLMDDTLIDLYQRGLISAEEAYARAEQKDVVRQHVKV"
     gene            861..2027
                     /locus_tag="VIS53_09660"
     CDS             861..2027
                     /locus_tag="VIS53_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEY5768088.1"
                     /translation="MAYLDQFLQIVVQQEASDLHIAEGEPPKIRVHGDITPIRAEPIS
                     HDEAKRMLNEVCGSDNWELFEQHGDLDFAYQMDEHSRFRSNYFKQSEGYAAAFRLIPT
                     KISTLEELGIPPVVKAFANLRGGLVLVTGPTGSGKTTTQAALVDFINENFARHIVTIE
                     EPIEFVHDNKRSIITQREVPADSNSFAAGLKASLRQDTDIVLVGEMRDLETIALALTA
                     AETGLLVFGTLHTNNARKTVDRMVDAFPADRQPQARAMLANSLRGVVAQLLLKRSDRP
                     GRIAVNEVLIANPAVAAIIREGATHKLQDIIVSGRAQGMQFMDDAIWALLEKGIVSPH
                     EAFMKAIDKSRFKPFLPAEEEALANAAGGIRDEERRPPGNLLRPVGTRAQVRAR"
     gene            2179..3771
                     /locus_tag="VIS53_09665"
     CDS             2179..3771
                     /locus_tag="VIS53_09665"
                     /inference="COORDINATES: protein motif:HMM:NF025253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY5768089.1"
                     /translation="MKTKQLSIPLVLIFGFVAFLPRVEAVVPPPDGGYPGFTTAEGTN
                     ALKNLTTGVANTGIGWYSLFTNSSGSYNTGVGAATLIFNNGEQNTATGVAALLSNTNG
                     TGNTATGVAALLSNTTGDVNTATGINALRSNTDGIENTATGFGALLSNVTGDRNTASG
                     VQALLTNTTGDDNTAVGYAALQSSSAASGNTAVGSQALQSNTTGTGNAATGLAALQSN
                     TTGFFNTAIGFVALAANDTGTNNTATGARALSSNTTGTFNTAYGFDALASNTTGDGNI
                     AVGGQALLNNDIGEDNIAMGTNTLLSNTSGNTNTAYGAFALNNNNTGSANIALGFGAG
                     GQLTTGNFNIDIGNPGVAGEANTIRIGGQGTQTSTFVAGIFGSNVAGSTVVVNSNGQL
                     GVSACSQRFKKAIEPMDKASEAILALKPVRFQYKTDATNIPQFGLIAEQVAEVNPDLV
                     VRDQKGEIYTVRYDAVNAMLLNEFLKQHRAFIKEQLKVADQQKKIDALREELKEQRYL
                     IQKISDKIDVSQSTIRVARRDP"
     gene            complement(3854..4879)
                     /locus_tag="VIS53_09670"
     CDS             complement(3854..4879)
                     /locus_tag="VIS53_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEY5768090.1"
                     /translation="MRAMVLNEPKRPLELSDVPKPKPGRGQLLVRVSTCAVCRTDLHV
                     VDGELPDPKLPLILGHQIVGQVEEIGEEMSEGPERSESRGAPIFTIGDRVGIPWLGWT
                     DGDCAYCRSGRENLCDNARFTGYTLEGGYAEFTVADARYCFHLPERYSDVEVAPLLCA
                     GLIGYRSYRKTGDARRLGIYGFGNAAHLIAQIAIYEGRELFAFTRPGDIATQQAAKEL
                     GAVWAGDSGEMPPEKLDAAIIFASVGPLVAAALRALAKGGVVVCSGIHMTDIPSFPYV
                     DLWEERVITSVANLTRHDGDEFFEIAPRVPVRTHTETFPLTQANAALDLFRAGKLRAT
                     AVLTIAE"
     gene            complement(4942..>5353)
                     /locus_tag="VIS53_09675"
     CDS             complement(4942..>5353)
                     /locus_tag="VIS53_09675"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY5768091.1"
                     /translation="FLLLGIVKKNGIMVVDFALQRIDEGWDLRSAIHEASVERFRPIM
                     MTTLAALMGAIPIALGFGQDAASRRPLGLVIVGGLIFSQLVTLFVTPVIYLWVEWFQE
                     HVLDKVPFLRSAHYHEHEVEPSRGQVRPEPVGAR"
BASE COUNT         1300 a         1521 c         1420 g         1112 t
ORIGIN      
        1 atcgtgtttc gggtcatcaa ttcctacgtt cggaccatgg acgaccttgg attgccgcaa
       61 cagcttaagc tactcactcg ctatcagaac ggcctgatcc tcgccaccgg ttcggtaggc
      121 accggcaaat caacgacgct tgctgcgatg gttcagcaag tcaatatcga acggcacgat
      181 cacatcatta cactcgagga cccaattgaa tacgtcatcc attcaaacaa ttgtcacgtt
      241 agccagcgcg aggttttcac gcacaccgaa tcgtttgcca cggcgctccg cgccgcgttg
      301 cgggaagatc ccgatgtaat catggtgggc gaaatgcgcg acttggaaac gatttcactt
      361 gccatcaccg ccgcagagac tgggcacctt gttctagcaa cccttcacac ctccaatgca
      421 tcgcgcacac ttgataggtt actggatgtg ttcccgccgg aacaacagga acacgtccgc
      481 gttatggtcg ctgaatcgct gcgtggtgtt gtcagtcacc agttgatacc gcggaaagat
      541 ggaaagggtc gcgtgctcgc gcttgagatt ctcaccaaca cactcgctgt cgccaatgtc
      601 attcgcgaaa acaaaacgtt catgttgccc ggtatcattc agaccggaaa gaagcagggc
      661 atgcgcttga tggacgacac attgattgat ctttaccaac gcggcctgat cagcgcagag
      721 gaagcttatg cacgcgccga gcagaaagat gtcgtgcggc aacacgtgaa agtatgacgc
      781 ggattacgca gataagtaag gcattcacga atcgatcttc atgctaaact tcgtttatcc
      841 gcgcagttcg gcgtttttcc atggcttatc ttgaccaatt cctgcagatc gtagtccaac
      901 aggaggcatc ggatttgcac atcgccgagg gcgaaccgcc gaagatacgc gtgcatgggg
      961 acataacgcc gattcgagcc gagccgattt cgcacgatga agccaagcga atgttaaacg
     1021 aggtttgcgg ctcggataac tgggaacttt ttgagcaaca cggcgatctc gattttgcct
     1081 accagatgga tgagcactct cgatttcgca gcaactactt taagcagtcc gaggggtacg
     1141 cggcggcatt tcgactaatt cccacgaaga tttcgacact tgaggaattg ggcattccgc
     1201 cagtcgtcaa ggcgtttgcc aatttgcgcg gcggactcgt gctcgttacc ggcccgactg
     1261 gttctggcaa aacaacaacg caggctgccc tggtcgattt catcaatgaa aattttgcca
     1321 gacacatagt gacgatcgag gagccgatcg aattcgtgca cgacaataag cgcagcatca
     1381 tcacacaacg cgaagtgcct gcagattcga attcgtttgc tgccggcctg aaggcttcgc
     1441 tgcgacagga taccgacatc gtgttggtag gggagatgcg tgacctggag acaatcgcac
     1501 tggctttaac cgcagccgaa accggccttt tggtgttcgg caccctgcat acaaacaacg
     1561 cgcgcaaaac cgtggatcgc atggtggatg ctttccccgc cgatcggcaa ccacaggcgc
     1621 gcgctatgct ggcgaactca cttcgcggcg tggtagcgca attgcttttg aaaagatcgg
     1681 atcgtcccgg gcgcattgcg gtgaacgaag tactgatcgc caatcctgcg gtcgctgcga
     1741 tcattcgcga aggtgccacg cacaagctac aggatataat cgtttccggt cgagcacagg
     1801 gaatgcagtt tatggatgat gccatttggg cgctgctgga aaaaggcatt gtgtcccccc
     1861 atgaagcgtt catgaaagcg atcgacaaaa gccgcttcaa accgtttctc ccggccgagg
     1921 aagaagcact ggccaacgcc gccggtggta tccgcgacga agaaagacgg cctccgggga
     1981 acttgttaag accggtcggt actcgcgcgc aggtgcgagc gcgctaagtg ttagcgaaca
     2041 cgcgcgatcg caattcgtta catgtcgccg gttcgtcagg tgccaacgcg cccctaagaa
     2101 ccttacactc tgcctgccta gcccaccggc agcgattttc gctcgacaag acaatgagac
     2161 ttctcaaagc tcaacgccat gaaaacaaag cagttatcaa ttcctctcgt gctcatattt
     2221 ggattcgtgg cgtttttgcc acgggtggaa gccgtcgtcc cgccaccgga tgggggttat
     2281 ccgggattta cgaccgcaga agggactaat gcgctgaaga atcttaccac cggggttgcg
     2341 aatacgggaa tcggttggta ttcgctgttt acgaacagct cgggcagcta caacactggc
     2401 gttggtgctg caacccttat attcaacaac ggagagcaaa acacggccac cggtgtggcg
     2461 gcgcttttaa gcaataccaa tggtaccggc aacaccgcca ctggcgtggc cgcgcttttg
     2521 agcaacacga ccggcgacgt caatacggcc actggcatta acgcactccg gagcaacacc
     2581 gatggcatcg aaaacactgc gaccggtttc ggcgctctct tgagcaacgt caccggcgac
     2641 agaaatactg ccagtggcgt tcaggctctc ttgaccaaca caaccggcga cgataacacg
     2701 gcggttggtt acgcagcgct ccagagcagt tccgccgcta gtggcaacac tgctgttggt
     2761 tctcaagcac tccaaagcaa caccaccggt accggcaatg ccgccaccgg tttggcagcg
     2821 ctccagagca acacaaccgg ctttttcaac acagcgattg gttttgtcgc tctcgcggcc
     2881 aacgacaccg gcacgaacaa cacggcgacc ggtgcccgcg cactctccag caacactact
     2941 ggcactttca acacagccta cggttttgat gcgctcgcca gcaataccac cggcgacgga
     3001 aatattgcag tcggcggtca agcgctactt aacaacgaca tcggtgagga caacattgca
     3061 atgggtacta acaccctcct tagcaacacc agcggcaata ccaacacagc gtacggcgct
     3121 tttgcgctta acaacaacaa tacaggcagc gccaacatcg cgctgggttt tggtgccggc
     3181 ggccaactca ccacaggcaa tttcaatatc gacatcggca atcccggtgt cgctggcgaa
     3241 gcgaacacga tccgcatagg cggccagggg acacaaacca gcacctttgt cgccggaatc
     3301 tttggttcaa acgttgcagg ctcgacagtt gtcgtgaact cgaatggcca gcttggcgtc
     3361 tcggcatgtt cgcagcgatt caagaaagcg atcgaaccga tggacaaagc cagcgaagcg
     3421 atcctcgctc taaagccggt cagatttcaa tacaaaaccg acgccaccaa cataccgcaa
     3481 tttggtttga ttgccgaaca agtggccgag gtaaatcctg acctggtggt ccgcgatcag
     3541 aaaggcgaaa tttatacagt gcgctatgat gcagtaaacg cgatgttgct caacgagttt
     3601 ctcaaacagc atcgcgcgtt tatcaaagag caactcaagg tggcggatca acaaaagaag
     3661 atcgatgccc ttagagaaga attgaaggaa cagcgatacc tcatccagaa gattagtgac
     3721 aagatagacg taagccaatc aacgatcaga gtggctagac gcgatccctg aaaggtgcaa
     3781 cgcgcacggt cacgctatag tgtccgccct tctgagcaga ttcactagac gactcgacgc
     3841 ttcaattggc atgtcattcg gcaattgtca gcactgcggt cgccctgagt ttgccggcac
     3901 ggaataggtc cagcgcagcg ttggcttgcg ttaatggaaa tgtttctgtg tgtgtgcgaa
     3961 ccggcacacg cggcgcgatt tcgaaaaact cgtccccatc gtgtcgggtc aggttcgcca
     4021 ctgaggtaat cacacgttcc tcccataaat cgacatacgg aaacgaaggg atgtcagtca
     4081 tgtgaattcc gctgcatact acaacgccgc ctttggcgag cgcgcggagc gctgccgcga
     4141 cgagcggacc tacggaggca aagataatcg cggcatcgag tttttccggc ggcatctcgc
     4201 cggaatcgcc ggcccatacg gcgccaagtt ctttcgcggc ttgttgtgtt gcaatgtcgc
     4261 ccgggcgagt gaacgcgaag agttcgcgcc cttcgtaaat cgcaatttgc gcaattagat
     4321 gcgccgcgtt gccgaacccg taaatgccaa gacgccgcgc atcgccggtt ttgcgatacg
     4381 atcggtaacc gattagtccc gcgcatagca acggtgcaac ctcgacatcg ctgtaacgct
     4441 caggtaaatg gaaacagtat cgcgcatcgg ccacggtgaa ctcggcgtaa ccgccttcga
     4501 gtgtgtaacc ggtaaagcgt gcattatcgc aaagattttc tctgccggat cggcaatacg
     4561 cgcaatcccc atcggtccag ccaagccacg ggattcccac gcgatctccg attgtgaata
     4621 tgggagcacc gcgactctcg gaacgttcag gtccctccga catttcttcg ccgatttctt
     4681 cgacttgtcc gacaatttgg tgaccgagaa tcaacggcaa tttcggatcg ggcaattcgc
     4741 catcgaccac gtgaaggtcg gtgcggcaaa ccgcgcaggt actgacgcgc acgagtaatt
     4801 gtcccctgcc cggcttcggc tttggcacat cgctcagctc caacggtcgt ttcggttcgt
     4861 tgagaaccat ggcgcgcatg gctactcttc ctcttactct tcggagaatt gatggattac
     4921 aagcatgagc gagggtaaca ctcaacgagc gcccaccggc tcgggtcgca cctgtccgcg
     4981 cgatggctca acttcgtgtt cgtggtagtg ggcgctacgg aggaacggca ccttgtcgag
     5041 cacgtgctcc tggaaccatt cgacccagag ataaatcact ggcgtaacga ataacgtcac
     5101 cagttgcgag aaaatcagtc cgcccacgat cactaggcct agcggtcgcc gcgatgcagc
     5161 atcctgaccg aatcccaatg caatcgggat tgcgcccata agggcggcga gtgtcgtcat
     5221 catgatggga cgaaaccgtt ctacgctggc ttcgtgaatg gccgagcgaa gatcccaacc
     5281 ttcgtcgatt cgttgcaacg cgaaatcaac caccatgatt ccatttttct tcacaatacc
     5341 taacaaaaga aac
//
LOCUS       DATDAJ010000388         4264 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2150470, whole genome shotgun sequence.
ACCESSION   DATDAJ010000388 DATDAJ010000000
VERSION     DATDAJ010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4264
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2150470"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..287)
                     /locus_tag="VIS53_09680"
     CDS             complement(<1..287)
                     /locus_tag="VIS53_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5768092.1"
                     /translation="MPPAEQSWTSLSATDETVRGPGIFATTHWSVVLEAQGESPAADK
                     ALEKLCRTYWRPIYGYVRRHGAGAEDAEDLTQGFFALLLERKDLNSVRKEKG"
     gene            complement(356..1051)
                     /locus_tag="VIS53_09685"
     CDS             complement(356..1051)
                     /locus_tag="VIS53_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768093.1"
                     /translation="MILSHKYKFIFIKTAKTAGTSIEVFLSKHCGPQDIVTPIAPRVE
                     GHQPRNYEGLINPVPEILERPGKFFSVLHHTMTSRTKFYNHMPAREVKQRVPVDVWNG
                     YFKFCVERNPWDKVLSHYHMHAAREGGRLSLDEYLARERFPINDFRYMDRSRSKIIVD
                     RIVRFENLLAELSEIFAELNIPFDGTLGVTAKSEYRADRRPHQEVFNEQQRRIVEKAF
                     AKEIELHGYRFEA"
     gene            complement(1091..1648)
                     /locus_tag="VIS53_09690"
     CDS             complement(1091..1648)
                     /locus_tag="VIS53_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768094.1"
                     /translation="MSWNSVMSVNGTAAHGNSARSFLMKASSFFAELKRRKVYKVAVA
                     YAFGSWLLIQAASIFLPTFDAPPCTMKAVVMFLGLGFVPSAILSWVFDITPQGIKRTA
                     GISPDETLGIVRQLEAQARQEFVRGYLSALIYSGMGDKTNAIDYLKREYLNHDNIDPT
                     DIRVDAMLDGLRSDPRFQAFADRPQ"
     gene            complement(1743..1934)
                     /locus_tag="VIS53_09695"
     CDS             complement(1743..1934)
                     /locus_tag="VIS53_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768095.1"
                     /translation="MHNPIQNEAEPQELRREIPFRSAPEDGTNEGTITSIKDPDTMLR
                     MTVLLIACLGLAVLAHVLV"
     gene            complement(2557..>4264)
                     /locus_tag="VIS53_09700"
     CDS             complement(2557..>4264)
                     /locus_tag="VIS53_09700"
                     /inference="COORDINATES: protein motif:HMM:NF036774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FlgO family outer membrane protein"
                     /protein_id="HEY5768096.1"
                     /translation="TLFLAYRSRVENAALNSTSEKSIAVLPFENLSRDSDSVYFADGM
                     QDEILTRLASLADLKVISRTSVMQYKSGVARNLRKIGQQLGVARVVEGSVQRAGNRVR
                     VNTQLIDVSTNQALWGQTYDRDVADVFAIQSEIATSIAGQLQATLSAREKTTIEEAPT
                     NDITAFELYVRAKDLLASRDAKADLLEVADLLSQAVAHDPSFFKAYCLLASTHDRLYF
                     LGYDHTPARLASAEAAIKTAFRLNPDAGEAHLARAQNLYRGYLDYSAALAELEVAAKT
                     LPNDARVFELKGYIQRRQGKQEEAVRSLQRSINLDPLNSYTLQQIALSYRLLHRYDEQ
                     KSVLDRALAIDSNDVDIKLERAAVDFYWKADPWPLCQMVDSIRAENPAATRDIAEYWL
                     GCALAQRDTAAAGNAVIAAGENPAFTDEAVAFSRSFMEGVIARMTKDDARARAAFTAA
                     RAEQQKIVQAHESYGPPLCVLGLIDAGLGHKEEGLREGRRAVELLPVEKDPINGIAMV
                     KYFAMIAAWVGDKDLACKQLAVAIRPPIGLTYGELKLLPFWDPLRGDPRFEKIVASLA
                     PK"
BASE COUNT          958 a         1162 c         1132 g         1012 t
ORIGIN      
        1 cctttttcct tgcgcacact gttcagatct ttgcgctcga gcaacaatgc gaaaaagccc
       61 tgggtaagat cttcggcgtc ctcagcgccg gcgccgtgcc gccgcacgta accatagatc
      121 ggccgccaat acgtgcggca aagtttttcc agagccttat ctgcggccgg cgattcaccc
      181 tgtgcctcga gcaccacgct ccagtgcgtg gtagcaaaga tccccggacc acggaccgtc
      241 tcgtcggtcg cgctcagtga cgtccacgat tgttccgcag gaggcatatt acaatgcaaa
      301 caaacgatgg cacgaaaggc aagcttggat tgcccgagcg catatctgtt tcgagttacg
      361 cctcaaatcg ataaccgtgg agttcaatct ctttggcgaa tgccttctct acgattcgcc
      421 gttgttgctc gttaaacact tcctgatgtg gccgccggtc ggcgcgatat tccgatttcg
      481 ctgtgacacc gagagtgcca tcaaacggaa tgttaagctc cgcgaaaatt tcactcagct
      541 ccgcaagcag gttttcaaaa cgaacaattc gatcgacgat gattttgctc cgcgaacgat
      601 ccatataccg gaaatcgtta atgggaaatc gctcgcgcgc gagatactcg tcgagcgaaa
      661 gccggccgcc ttcgcgtgcc gcgtgcatat ggtaatgaga caaaactttg tcccacggat
      721 ttcgttctac acagaatttg aaatagccgt tccagacgtc cacgggaacg cgttgcttca
      781 cctcgcgcgc cggcatgtga ttataaaatt tcgtgcggct tgtcattgtg tggtgcagca
      841 cggagaaaaa cttgcctggt cgttcgagga tttcgggaac cggattaatt aagccctcgt
      901 aattacgcgg ttgatgtcct tcaacacgtg gcgcaatcgg tgtcacgatg tcctgcggac
      961 cacaatgttt cgaaaggaag acttcaatgc tcgtgccggc ggtcttcgcg gttttgatga
     1021 agatgaattt gtatttgtgg gacaggatca tcgaacgtgg gccaacgctg tcacttcaat
     1081 cgcgactgtt ttactgcggc ctgtccgcaa atgcctggaa gcgcggatcg cttcgcagcc
     1141 cgtcaagcat agcatcgacc cgtatgtctg taggatcgat gttgtcgtga ttgaggtatt
     1201 cgcgtttaag gtaatcaatc gcgttcgttt tgtcgcccat tcctgagtaa atcaaggcgg
     1261 ataaataacc gcgcacgaat tcttgccgcg cctgcgcctc aagctgccga acgatgccaa
     1321 gcgtttcgtc cggcgaaatg cccgccgttc gctttattcc ctgcggcgtt atgtcaaaaa
     1381 cccacgagag aattgcggag ggaacgaaac ccagcccgag aaacatgacg actgctttca
     1441 tcgtacacgg cggtgcatcg aacgtcggca gaaaaatcga tgcggcctgg atcagtagcc
     1501 aggagccaaa agcatacgcg actgcaactt tgtaaacctt ccgccgtttc aactcggcga
     1561 aaaaactact cgccttcatt aggaagcttc gcgcgctatt gccgtgagcg gcagtgccgt
     1621 tcaccgacat gacactattc caactcacgg cgtcgccgga agatgtcact tcatcctccg
     1681 agcttggaat tatcgagatt gagttgagca tacattcctc cgaaatttgt tctcgcgcgt
     1741 tattagacaa gtacgtgcgc caggaccgcg agcccgaggc aggcaatgag aagcacagtc
     1801 atcctgagca tcgtgtctgg atctttgata gacgtaattg ttccctcgtt cgttccgtcc
     1861 tccggtgcag agcgaaaagg tatctcacgc ctcagctctt gcggttcagc ttcgttttgg
     1921 atcggattgt gcatttacca gttccttcgg aaatctttac ccggtgtggc aaaaattccg
     1981 aaatcctggt gcggactacg gttcgcacag atgggggcga atgggattcg gcgccgaacg
     2041 cgtccgagga acatcccaac gtaccgttcc tgccttgtgt gaaatagtca gtgcgtgaaa
     2101 actgcgactc ttcgatgcct aacaaatctc ttgctcgttg ttacttagga gcccaacatg
     2161 actctatgaa tacgaaaaag aatattcggc tcctaacgat tatcgcactg ctgttaaccc
     2221 caattgtctt tggcatcagc gggtgtatgg gaaaacatac ggacgaaaat actactccta
     2281 cccctcctcc ggctgactct tgatcgttct tactggtcgc gattctagag gctcgctccg
     2341 gcatctggcg ctcctaaacg aacggacgga gggcggagcc atgtttaagc ctcatcggtt
     2401 gaacagccca aggcggagcg tgtcagggcg tccgtcaagt tattttagga gcgccactcg
     2461 gatttgccgt acggactcat atgacgagcc gagctccagt gtacgctcag gcgtttgccg
     2521 tcatgcgcgt taatgaagat gtctaggagt taaaactcat ttcggcgcga gggaggcaac
     2581 gattttttcg aaacgcgggt cgccacgcag cgggtcccaa aacggcagca gtttcaactc
     2641 gccgtaggta agtccgatcg gggggcggat ggcaacggca agctgcttgc aggcgagatc
     2701 tttatcgcca acccacgcag cgatcatcgc gaagtattta accatagcga tgccgttaat
     2761 tggatctttt tccacgggca gaagctccac tgcacgccgg ccttcgcgca ggccttcctc
     2821 tttgtgcccc agccccgcat cgattaaacc cagcacgcag agtggtgggc cgtagctttc
     2881 gtgagcttga acgatctttt gctgctccgc gcgcgctgcg gtgaaagcgg cacgtgcgcg
     2941 tgcatcatct ttcgtcatac gggcaataac gccttccatg aacgaccgac tgaaagcaac
     3001 ggcctcgtca gtgaaggccg ggttttcgcc tgccgcgatc acggcatttc ccgcggcagc
     3061 ggtatcgcgt tgggccagtg cgcacccaag ccaatactcg gcgatgtctc gagtggcagc
     3121 gggattttcg gcccgaatcg aatctaccat ttgacacaac ggccacggat cagctttcca
     3181 atagaaatcc acggccgcgc gctcgagttt aatatcgaca tcattcgagt cgatagccag
     3241 cgcgcggtcc aagaccgatt tttgctcgtc gtagcggtgc agaagacgat agctaagcgc
     3301 aatctgctgc agtgtgtagc tgttgagcgg atcgagatta atgctgcgct gcaagctacg
     3361 cactgcctct tcttgtttgc cttggcgacg ctggatgtaa cctttgagtt cgaatacccg
     3421 ggcgtcattc ggcaaggtct tggcggcgac ctccaattcg gccaaagcgg cactataatc
     3481 gaggtagcct cgataaaggt tttgggcgcg tgcgagatgt gcttcacccg catcggggtt
     3541 taggcgaaat gccgtcttaa ttgctgcttc agctgatgcc agccttgcag gggtatggtc
     3601 ataaccgagg aagtaaaggc ggtcgtgcgt agaagcgaga aggcaatacg ctttgaaaaa
     3661 tgatggatca tgcgcgacag cctggctcag taaatcagct acctccagca aatcagcttt
     3721 ggcatccctg ctcgcaagaa gatctttggc tcgaacatag agttcgaagg cggtgatatc
     3781 atttgtgggg gcttcctcaa tcgtagtctt ttcgcgtgcc gaaagggtag cttgcaattg
     3841 gccggcaatc gaggtcgcga tctcactttg gattgcgaat acatcagcaa cgtcgcggtc
     3901 gtatgtctgc ccccatagcg cctgattggt ggacacatcg atcaattggg tgttgacgcg
     3961 cacccgattg cccgcgcgct gaacgctccc ctctaccaca cgcgcaacac cgagttgctg
     4021 gccgatcttg cgcagatttc gcgcgactcc gctcttgtat tgcatcactg atgtgcggct
     4081 gatcaccttc aaatcagcca gacttgccag ccgggttaaa atttcatcct gcatgccatc
     4141 ggcgaaatag acgctatccg aatcacgact caggttttca aacggcaaca ctgcaatgct
     4201 tttttcagac gtggaattca aagctgcatt ttcgactcgt gatcgatacg cgaggaaaag
     4261 tgta
//
LOCUS       DATDAJ010000389         2113 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2163565, whole genome shotgun sequence.
ACCESSION   DATDAJ010000389 DATDAJ010000000
VERSION     DATDAJ010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2163565"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VIS53_09705"
     CDS             <1..363
                     /locus_tag="VIS53_09705"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF014860.4"
                     /note="E3 component of alpha keto acid dehydrogenase
                     complexes LpdC; forms a homodimer; binds one molecule of
                     FAD monomer; catalyzes NAD+-dependent oxidation of
                     dihydrolipoyl cofactors that are covalently linked to the
                     E2 component; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY5768097.1"
                     /translation="IIYTNPELAGVGLTEDQAKEQGIEVRIGKFPFRANSRALCSDDV
                     EGMVKFVADAKTDRVLGAHILHHAASELIAEAVSVIEFGGSSEDIGRTTHSHPTLSEA
                     VREAALNVEKRALHIINR"
     gene            complement(458..1756)
                     /locus_tag="VIS53_09710"
     CDS             complement(458..1756)
                     /locus_tag="VIS53_09710"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY5768098.1"
                     /translation="MRTRTTETARVPEDISGRQRRLPVGGITWRHTFRALRHRNYRLF
                     FWGQLVSLTGTWMQQTAMSWYVYQITNSKFLLGVVSAVGSAPMMISSIWGGALADLYP
                     KRSILVATQAAQMICAFLLATGVWLGFASTGFIVVVAALNGIAMGFDMPARQAFTVEM
                     TSREDLLNAISLNSSIVNGARVVGPSVAGLMIGAVGVAMCFFLNGLSFIAVIAGFLLM
                     RLPIFERKIEIASAGEHAWEGILYSIKHPRVRTILLLFLAVGVFGWSYAVLMPAFARD
                     VLGRGANGYGILMSASGTGALVGALLVATFGHLFTPRKIALGGVWLFSIAMLAVSFTN
                     SFPLALVFLFAAGFGMLLFFSTSNTVLQTIVPDEMRGRVMGVWSLVFGAMIPLGSLEA
                     GAVAHFVGTPLALAFGAIICAASALVTLCVIRRREAQNLR"
BASE COUNT          522 a          622 c          564 g          405 t
ORIGIN      
        1 atcatctaca cgaatccgga gctggcgggc gttggtctca cagaagatca agccaaggag
       61 cagggaatcg aggtgcgcat tggtaaattc ccatttcgcg ccaacagccg tgcgctttgc
      121 agcgatgacg tcgaaggaat ggtcaagttt gtcgccgacg ctaaaaccga tcgcgttctc
      181 ggcgcgcaca ttttgcatca tgccgcttca gagttaatcg ctgaagccgt ttcagtgatc
      241 gaatttggcg gcagctccga agacatcggg cgcaccactc attctcaccc cacattaagc
      301 gaagccgtca gagaagccgc acttaacgtc gagaaacgcg cgttgcacat cattaaccgc
      361 taaggtgagg tgatgcaggc aatcctgcct gcaggtcttg aagcgcgcgg acaagattgt
      421 ctgcgtcaca cgcggagcga cgcgcctgtc ttacaagcta tctcaaattc tgcgcttctc
      481 gtcgccgaat cacgcacaac gtcaccagcg ccgacgcggc gcaaatgatt gcgccgaacg
      541 cgagcgccag gggtgtgcct acgaaatgcg caacggctcc agcttccagg ctgccgaggg
      601 gaatcatggc gccgaacacc agcgaccaca cgcccatgac gcgtccccgc atttcgtccg
      661 gcacgatggt ttgcagcacg gtgttagaag ttgaaaaaaa cagcagcatt ccaaatccgg
      721 cggcgaaaag aaataccagc gcgagcggaa aactgttggt gaacgaaacc gccagcatcg
      781 ctatggaaaa taaccagacg ccgcccagtg cgattttgcg cggcgtaaaa agatgtccaa
      841 acgtcgccac cagcagggca cccacaagcg cgccggttcc gctcgccgac atcaaaatgc
      901 cgtaaccatt tgctccgcgt ccgagcacat cgcgtgcaaa cgccggcatc agcaccgcgt
      961 aagaccagcc aaaaacgccg accgctagaa agagcagcaa aatcgtgcgc acacgcggat
     1021 gctttatcga atacaagatt ccctcccacg cgtgctcgcc cgcggaagcg atttctattt
     1081 tccgttcgaa aatcggcaga cgcatcagca agaaaccggc gattaccgcg ataaagctga
     1141 gcccgttcag aaaaaaacac atcgccacgc cgacggcgcc aatcattaat cctgcgaccg
     1201 acgggccgac gacacgagcg ccgtttacga tcgagctgtt gagcgatatc gcgttcagca
     1261 aatcttcgcg gcttgtcatt tcgaccgtaa acgcctggcg ggcgggcatg tcgaatccca
     1321 tggcaatgcc atttagcgct gcgacgacga cgatgaaccc tgttgaagcg aacccgagcc
     1381 acacgcccgt agccagcaaa aatgcacaaa tcatttgggc tgcctgcgtc gcaacaagga
     1441 ttgaccgttt cggatagagg tcagccagcg cgccgcccca gatggatgaa atcatcattg
     1501 gcgcagatcc gaccgccgac actacaccga gcagaaattt tgagtttgtg atctggtaaa
     1561 cgtaccagct catcgcagtc tgctgcatcc acgtgccggt gagcgagacg agctggcccc
     1621 agaagaatag tcgataattg cgatgccgta gcgcacgaaa tgtatgccgc cacgtaattc
     1681 cgcccacggg cagacgccgc tgccggccgc tgatgtcttc cggcacccgc gccgtttctg
     1741 tggttctcgt gcgcatcagg aaagagacca cgcctgttca aacttcgcac gaagtgcttt
     1801 cggagtgcga tgcgtcttcg catcgctttg cgcgtcaccc tccgcagaac gctctcgtag
     1861 tgcccagcag acagcatctc gtaatttgcg tgtcatgtgg agcggagcga aacatctctg
     1921 gctattattt tacgtatcgc cagagaaatg atcagagatt cttcgcttcg ctcagaatga
     1981 cattctatga tgagctgtag tggaaagcac agaggcaatt ctccttcgtc aacgcaaatt
     2041 cagcgacacg agtttgatcg tgtcatggtg cacggaatcg ttaggctgcg ttcagacgat
     2101 tgccaaaggt gcg
//
LOCUS       DATDAJ010000390         3782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2166264, whole genome shotgun sequence.
ACCESSION   DATDAJ010000390 DATDAJ010000000
VERSION     DATDAJ010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2166264"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1680
                     /locus_tag="VIS53_09715"
     CDS             <1..1680
                     /locus_tag="VIS53_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY5768099.1"
                     /translation="IVEQGSKIVEALRESQSAAPGEGKIDGAVADAAYRQIDRSYDRK
                     EGGFGNAPKFPRPVTLNFLTRFYARDSKGDAGKHALDMALFTLRKMAAGGMHDHIGGG
                     FHRYSVDRSWHVPHFEKMLYDQAQLAVAYLDAFQITKDKQYESVARDILDYVARDMTS
                     KEGGFFSAEDADSPVVGSHDSGHKKTAEGAFYVWRKKEIDDALGGSAALFDFHYGVQA
                     HGNAAEGSDPHDEFREKNILIERHTIAETAEHFRTTKEEIAKALAQSREKLFAIRAKR
                     PRPHLDDKIIAAWNGLMISAYARAAQVLDDPRYLEIATRSANFVRTKLYDPSRKILYR
                     SYREGRSNIEGFADDYAMVIQGLLDLYEASFDVEWLKFAVQLQEIQDRLFFDEKNGGY
                     FSNSGRDKSVFVRMKDDNDGAEPAASSVAALNLLRLSQIYDDPKIAERAKRTIDAFAT
                     ILLQFPSGMPQMLVAVENSLGKPRQIVIAGKKDSPETKALLKEVHRHFLPNTIVILAD
                     ANEGQKYIGERNEAVRAMSLVEGKSAAYVCENFTCKAPVTDPKQLSDLLKL"
     gene            complement(1698..>3782)
                     /locus_tag="VIS53_09720"
     CDS             complement(1698..>3782)
                     /locus_tag="VIS53_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEY5768100.1"
                     /translation="GQPRNKQLLRMMEDPDKRRAIDKAELSFFQDTRKEDLFALKEEL
                     FFTIDEKSNESDLSEQGRAFLNPDDPNSFVLPDLINEFTEIDLDETLSPEEKDKRKAE
                     RQQHCDSQAERIHNISQLLRAYCLFEKDVQYVIEDNKVVIVDEFTGRKMPGRRWSDGL
                     HQAVEAKEGVQIDRETQTLATITIQNYFRLYQKLAGMTGTAETEAAEFHDIYKLDVNM
                     VPTNRPVRRTDNNDRIYKTRREKYNAVINEIREAHARSQPVLVGTVSVEASELLSRML
                     KREKIPHNVLNAKFHMQEAEIVARAGQPGTVTISTNMAGRGTDIKLGPGVIEVGGLMV
                     VGTERHEARRIDRQLRGRCARQGDPGASRFYVSFEDDLMRNFGAADRMTKIMERFGLE
                     EGQELEHRWLNKSVETAQKRVEQRNYLVRKRTLDFDDVMNMQREVVYTWRNEVIDSEE
                     PRTHIYEVIDEAVPLRVKEYFGGEEPNYTGLIHWVNTTFPLGLTKEKAEFETRNAEEN
                     TQFLIEKIKNAYERKSSHEEPTAVKSLERYIILNAIDRLWQEHLYAMDALREGVYLRG
                     YAQKDPLIEYKTEAYDMFVELMANIKNEVLNNLFRSTSNLQAFENFLATLPQFLLREE
                     GPTAPTATADARMRQPVRAMAAVGGDGEGDGDGGVSIDLPIRRSLPKVGRNEPCPCGS
                     GKKYKNCCGRVA"
BASE COUNT          816 a         1035 c         1042 g          889 t
ORIGIN      
        1 attgtggagc aggggagtaa gatcgttgag gcgctccgcg agtcgcaatc agccgcaccg
       61 ggtgaaggga aaatcgacgg cgcagttgcg gatgctgctt atcgtcaaat cgatcgcagt
      121 tatgatcgga aggagggcgg attcggcaat gcgccgaaat ttccacgacc ggtcacgctc
      181 aattttctca cacgattcta cgcacgcgat tccaaaggcg atgccggtaa acacgcgctc
      241 gacatggcgc tgttcacgct gcgcaaaatg gctgccggcg gaatgcacga tcacatcggc
      301 ggcgggtttc atcgttattc ggttgatcgt tcctggcacg tgccgcactt cgagaaaatg
      361 ctctacgatc aggcgcagct cgccgtcgcc tatctcgacg ccttccaaat cacaaaagat
      421 aagcaatacg aatcagtggc gcgcgacatc ctcgattacg tcgctcgcga catgacgtcg
      481 aaagaaggcg gctttttctc agccgaggac gccgacagcc ccgtggtagg aagccatgat
      541 tccggccaca agaagaccgc tgaaggcgca ttctatgtct ggaggaaaaa agagatcgac
      601 gacgcactcg gaggttccgc cgcgcttttc gatttccatt acggcgtcca agcgcacggc
      661 aacgccgcgg aaggaagcga tccacacgat gaattccgcg aaaaaaacat tttaatcgag
      721 cgccacacga ttgcagaaac ggcagaacac tttcggacaa ccaaagagga aattgcgaaa
      781 gcgctcgcgc agagccgcga gaaattgttt gcgattcgtg ccaaacggcc gcgaccgcat
      841 ctcgacgaca agattatcgc cgcctggaat ggactgatga tctccgcata cgcgcgcgct
      901 gcgcaagtgc tggatgaccc gcgctatctt gagatcgcaa cgcgttccgc gaattttgtg
      961 cggacaaagt tgtacgatcc atcgcgcaag attttatatc gcagttaccg ggaggggcga
     1021 agcaatatcg aagggttcgc tgacgactac gcgatggtga tccagggtct tctggacctg
     1081 tacgaggcat cattcgatgt cgaatggctg aagttcgcgg tgcagttgca ggagatacag
     1141 gaccggctct tcttcgacga gaagaacggc ggttacttca gcaatagcgg cagggataaa
     1201 agcgtgttcg tccggatgaa agacgataac gacggcgccg agcctgctgc gagttctgtc
     1261 gcggcgctga accttctgcg gttatcgcag atctatgacg acccgaagat tgctgagcgc
     1321 gcgaaaagga cgatcgatgc gtttgcgacg atacttttgc agttccccag cggtatgccg
     1381 cagatgctgg tcgccgttga aaactcgtta ggcaagccgc gccagatcgt gatcgcaggc
     1441 aagaaggatt cgccggaaac caaagcatta ctcaaagagg ttcatcgcca ttttctgcca
     1501 aacacaatcg taattctggc cgatgcgaat gaagggcaga aatatatcgg cgaaagaaac
     1561 gaggctgttc gcgcgatgtc gctggttgaa ggaaaatcag ccgcttacgt atgcgagaat
     1621 ttcacctgca aagcaccggt gaccgacccg aaacaactca gcgacttgct gaagctgtag
     1681 ccaagacgag cggtccgtta cgccacgcgg ccgcagcagt tcttatattt tttaccgctg
     1741 ccgcaggggc agggttcgtt gcgaccgacc ttcggcaatg aacggcgaat cggcagatcg
     1801 attgatactc caccatctcc atcgccttcg ccgtctccac ccacagccgc catcgcgcgg
     1861 actggctggc gcatacgcgc gtcagcggtt gctgttggcg cggttggccc ttcttcgcgc
     1921 aggaggaact gcggcaacgt tgcgaggaaa ttctcgaacg cctgaagatt ggaagtgctg
     1981 cggaacagat tgttcaagac ttcattctta atgttcgcca ttaattcgac gaacatatcg
     2041 tatgcttcgg tcttgtattc gatgagcgga tctttttggg cgtagccgcg gagataaacg
     2101 ccttcgcgca acgcgtccat ggcgtaaagg tgctcctgcc acaggcgatc tatcgcgttc
     2161 aaaatgatgt aacgctccag gctttttacg gcagtcggct cttcgtgact cgatttgcgc
     2221 tcgtaagcgt tcttgatttt ttcgatcagg aactgcgtgt tctcttcggc gttgcgggtt
     2281 tcaaattccg ccttctcctt ggtcagtccc agtggaaacg tcgtgtttac ccagtggatg
     2341 agacccgtgt aattcggttc ctcgccaccg aagtattctt tcactcttag cggcacggct
     2401 tcatcgatca cttcgtagat gtgggtacgc ggttcctcgg aatcgatgac ttcattacgc
     2461 caggtgtaaa caacctcgcg ctgcatgttc atgacatcgt cgaaatcgag tgtgcgtttt
     2521 cggacgagat agttgcgttg ctcgacgcgt ttctgcgctg tctcaacgga tttgttcagc
     2581 cagcgatgct caagctcctg accttcttca agcccgaaac gttccatgat ttttgtcatg
     2641 cgatcggcgg cgccaaagtt ccgcattaga tcgtcttcaa aactcacgta aaatcgcgat
     2701 gcaccggggt cgccctggcg tgcgcagcgt ccgcgcaatt gccgatcgat ccggcgcgct
     2761 tcatgccgct cggtgccgac gaccattagt ccaccgactt ctatgacgcc cggcccaagc
     2821 ttaatgtcgg taccgcggcc agccatgttg gtcgaaatcg tgaccgtgcc tggttgtccg
     2881 gcgcgcgcca caatctcagc ttcctgcatg tgaaactttg cgttcaacac gttgtgcgga
     2941 attttctccc gctttagcat tcggctcagc aactccgaag cttcaacgct caccgtgcca
     3001 accagcaccg gctgacttct cgcgtgagct tctctgattt cgttgatgac ggcgttgtat
     3061 ttttcgcgac gcgttttgta gatgcgatcg ttgttatccg tgcgccgcac cggccgattc
     3121 gtcggaacca tgttcacgtc cagtttgtaa atgtcgtgaa actcggccgc ttcggtttcg
     3181 gccgtgccgg tcattcccgc cagcttctga tagaggcgga aataattttg aatggtgatg
     3241 gtcgccaggg tttgcgtttc gcggtcgatc tgcacgcctt ccttcgcttc caccgcctga
     3301 tgcaatccgt cgctccaacg gcgccccggc attttgcgtc cggtgaattc gtcgacgatg
     3361 acaaccttgt tgtcttcgat gacgtactgg acatccttct cgaagaggca gtaggcgcgt
     3421 agcaattgcg agatgttgtg gatgcgctcc gcctgcgagt cacaatgctg ctggcgttcc
     3481 gcttttcgtt tgtccttctc ctcgggcgaa agcgtctcgt cgagatcgat ctcggtgaat
     3541 tcgttaatta gatccggcaa aacaaatgag ttcggatcat cgggattgag aaaggcacgg
     3601 ccctgctccg agaggtcgga ttcgttcgat ttctcgtcta tggtgaagaa caactcttcc
     3661 ttgagcgcaa acagatcttc ttttcgcgtg tcctggaaaa aggaaagctc agccttatcg
     3721 atggcgcgac gcttgtcagg gtcttccatc atgcgcaaaa gctgcttatt gcgcggctga
     3781 cc
//
LOCUS       DATDAJ010000391         7076 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2175046, whole genome shotgun sequence.
ACCESSION   DATDAJ010000391 DATDAJ010000000
VERSION     DATDAJ010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 7076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7076
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2175046"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..1168)
                     /locus_tag="VIS53_09725"
     CDS             complement(176..1168)
                     /locus_tag="VIS53_09725"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY5768101.1"
                     /translation="MRSRWKRIRYRLEWLGLVLATKLIPLCSRRACYHIAWAAGTLLS
                     FIDRQRYQVALSNLEVAFGDQFSPKERRRIARESFQHFGRTMVDLLWSPRLTKENFSQ
                     YIELENFEETSRNTGPERSLMIACYHYSNFEWLSLACGFLDLKGTIISQEFKNSSLDP
                     IFKRLREQSGHELVPRERGIMRLYKVLRRKGRTALLVDLTVPPSQGAVAIDCFGLGTS
                     VTSAHAWLHERTGVPIVPAHTEPLPHGRYRLVFHTKIGPTAGMTPQQIAQACWNSFEP
                     YVRKTPAPWLWMYKHWRYRPAHPDRLYPFYSNFYRPFEDMLEANKIGASDEAKL"
     gene            complement(1237..1425)
                     /locus_tag="VIS53_09730"
     CDS             complement(1237..1425)
                     /locus_tag="VIS53_09730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768102.1"
                     /translation="MKKLLPKSILISTLLIALLGCAGPAPSPEQQARDADQQREAERQ
                     QKEFRKSLPPVSNPGQGW"
     gene            complement(1506..2348)
                     /locus_tag="VIS53_09735"
     CDS             complement(1506..2348)
                     /locus_tag="VIS53_09735"
                     /inference="COORDINATES: protein motif:HMM:NF017970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1003 domain-containing protein"
                     /protein_id="HEY5768103.1"
                     /translation="MNVETLRHVPLFESLDTEAAHELCELLESLDCKAGAVLFRTGDE
                     GDAMYLIEQGKVRICVRTKDGHEVTLTELRRGDFFGEMALLDGKPRSADARVAEDARL
                     AVLSREHFLSFVSSNPNVALEMLTALTNRLRHTDELLRHTATRNVNVEEAARLTLADR
                     AADLIAEFGGSWKFILAAVVLVNIWVWINMWLAWIDKISFDPYPFLLLSTGINVLSIL
                     QAPIILMSQNRQSHKDRLRAEIDYQVNLKNELALNEILEHLKALEHKYREQTVDEYDV
                     TKIE"
     gene            2505..4310
                     /locus_tag="VIS53_09740"
     CDS             2505..4310
                     /locus_tag="VIS53_09740"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: protein motif:HMM:NF000586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEY5768104.1"
                     /translation="MKNVLFVCTGNICRSPIAEGLFRRLTGNRKDIEVASAGVHAVRG
                     QPPSLYAVEVCAAEGTDISGLRSQPLTGALVDQATHIFAMTGTHVETIQTLFPQSAEK
                     TFLLREFEEPGTTVWRDLPDPIGLGREVYEDCARIIKNALPSVLAFVEQGALVRPGAP
                     RSSEISSYSMDHLSRPFDPGSIASTSAPCYGDALRKVDPAIFDAIAAEEKRQRENIEL
                     IASENFTSRAVMEAQGSVMTNKYAEGYPRKRWYGGCENVDTAEQLAIDRAKRLFGCEH
                     VNVQPHSGAQANMAVYFAMLKPGDKILAMNLAHGGHLTHGHPANFSGKFYAVSQYGVS
                     EKTEQIDYDALQKQAEEVRPVMITAGASAYPRIIDFPRLRQIADSVGAILFVDMAHIA
                     GLVAGGQHPSPIPHAQFVTTTTHKSLRGPRGGIVMCEEKFAKQIDATVFPGVQGGPLM
                     HVIAAKAVCFHEALQPQFREYQRQVVINAKALAAGLAKHGYRIVSGGTDNHLMLVDLR
                     PKDLNGKEAQEVLDRAGITVNKNAIPFDTSSPFKPGGIRVGTPAVTTRGMKEEEMLEI
                     AELAAEALDKRSDEGAIENVRNKVIDLTSRFSLPI"
     gene            4419..5960
                     /gene="zwf"
                     /locus_tag="VIS53_09745"
     CDS             4419..5960
                     /gene="zwf"
                     /locus_tag="VIS53_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEY5768105.1"
                     /translation="MNRAADQPEPNPLREGLSARPVPQPCSIVIFGATGDLTHRKLVP
                     ALYNLAADGELPPGVVIAGFARRDKSDDDFRRDIEESTRKYSRQPVRDEIWNAFAQSI
                     FYHRSEFGDDAGYGRLAKRLEELDKSHGTRGNRLFYLAAGPDQFESILKNLKAAGLNQ
                     TCKGSWARVIIEKPFGTDLASARELNRVVRNSFTEEQTYRIDHFLGKETAQNILVLRF
                     ANAIFSPLWNTHYIDNVQITAAETLGVGTRAGYYEDAGALRDMVQNHLIQLLCLVAME
                     PPTDLSADSIRGEKVKVVRSLRRWSRSEIEANVVRGQYTKGAIHGEPVLGYRQEQNVN
                     PDSQTETFVALRLFIDNWRWADVPVYMRVGKRLPKSATEISIHFKKAPAVLFNKDLRD
                     LNVLVIRIQPDEGISLRIHAKVPGTSFRIEPVKMDFHYGTSFGKPSPEAYERLLLDAM
                     SGDATLFARSDEVEQAWAFIDPIEEAWHAKKDAPELCFYPAGSWGPEAADDLLARDGR
                     AWRRL"
     gene            5969..7027
                     /locus_tag="VIS53_09750"
     CDS             5969..7027
                     /locus_tag="VIS53_09750"
                     /inference="COORDINATES: protein motif:HMM:NF042449.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase assembly
                     protein OpcA"
                     /protein_id="HEY5768106.1"
                     /translation="MPAAAETYSLGAPVELGKIEQELKKLWQEGEGAMTRASLMNLVV
                     YSDQPGSLNNNTQLMAKITENHACRAIVTEADCRSEENRVDAWISAHCHVSSAGNKQV
                     CSEQISFLLKGGCATQLPSIVLSNLDSDLPLYLWWQEEFREPMDPQLWTWVDRVIYDS
                     HGWSDFRSQTRLLELMQAETNQRIVLCDLNWTRLDNLRFALAQFFDHPASHHRLSKMS
                     KVRIDFAPAFRSTAILFAGWLGAQLNWHIEEVKSPRELRFTGASARRIDVDLRERNGE
                     PVHEVALTSGNVEFRVTYADCGDLLEISRTQNNEKGIPQLMPAGNNDPVGLISEELIR
                     GGPHRVYLNALNCVRDLL"
BASE COUNT         1658 a         1970 c         1938 g         1510 t
ORIGIN      
        1 cgacaaacgt gttgcgttga tcacggttaa ggattttaaa aagccggatc gcttccaccg
       61 cgtttttcaa ctattcgcct ggctgttata tcgcaagctt gaaacgcaac aagtagcgat
      121 ggcgcacgaa agcgacggca acaaaccgga ggtggcaggc gttcgcggca aacgcctaca
      181 acttcgcttc gtcgctcgcg ccaatcttgt ttgcttccag catatcttcg aacggccgat
      241 agaagttgga gtaaaacggg tagagccgat cgggatgtgc aggacgatag cgccagtgtt
      301 tgtacatcca aagccagggc gccggggttt tgcgtacgta aggctcaaat gaattccagc
      361 aagcctgcgc gatttgctga ggcgtcattc cagctgtggg tccgatcttt gtgtgaaata
      421 ccagcctgta ccgtccgtgc ggcagcggtt cggtgtgcgc gggtacgatg ggaacacccg
      481 ttcgctcgtg cagccacgca tgcgccgacg tgacgcttgt ccctaatcca aaacaatcga
      541 ttgccacggc accttgactc ggtggcactg tgagatcaac caacagcgcc gtgcggccct
      601 ttcggcgaag caccttgtaa agtcgcatga tgccgcgctc gcgcgggacg agctcgtgac
      661 cggattgctc gcgcaatctt ttgaaaattg gatccaggga cgaattctta aattcctgcg
      721 agatgattgt gcctttcaga tcgagaaaac cacaggcgag actgagccat tcaaagttgc
      781 tgtagtgata acaggcaatc atcaagctgc gctcgggacc tgtgttacgc gatgtttctt
      841 cgaaattttc caactcaatg tactgagaaa agttttcttt tgttaggcgc gggctccata
      901 gcagatcgac catggtccgt ccgaaatgct ggaacgactc acgggcaatt ctccgtcgct
      961 ccttgggcga gaactgatcg ccaaatgcga cctcgagatt gcttagcgcc acttggtagc
     1021 gctgccgatc aataaagctc agcagggttc ctgctgccca ggcgatgtga tagcacgccc
     1081 gtcgcgaaca taacgggatc agttttgtgg caagaacaag cccgagccac tccagccgat
     1141 atcgaattcg cttccagcgc gaccgcattg cggagtctca acgacgaaat tcgaatgtct
     1201 aacagcttcc cccgtaatga tgaatcagcg gttcgcctac cagccctgcc ccgggttact
     1261 taccggaggc aaactttttc gaaactcctt ctgctggcgc tcggcttctc tctgctggtc
     1321 tgcatcgcgc gcctgctgtt caggactggg ggctggaccg gcacacccta gcaacgcgat
     1381 aagtagggtc gaaatcagaa ttgacttggg aagcagcttt ttcatacgga gatggacagg
     1441 acgataatca gagcgatcaa cgcggcaacc tccgacaaga tgttccacaa gtcggcgaag
     1501 gcggattatt caatcttcgt gacgtcgtat tcgtctaccg tctgctcgcg gtatttgtgc
     1561 tcgagcgctt tcaggtgttc gaggatttca tttaacgcga gttcgttctt caaattgacc
     1621 tgataatcga tttcagcgcg tagccgatct ttgtgcgact gccgattctg cgacatcagg
     1681 ataattggcg cctgcaggat ggaaagaacg ttaatcccag tgctcagcaa caagaacgga
     1741 tatggatcga agctgatttt gtcgatccag gccaaccaca tgtttatcca tacccaaatg
     1801 ttgacgagaa caaccgcggc aagaatgaat ttccaactgc cgccaaattc agcgatgaga
     1861 tctgctgcgc gatcggcaag cgtaagccgc gctgcttcct cgacattgac gttgcgggtc
     1921 gcagtgtgcc gcaaaagttc atctgtgtgg cgcaaccgat tggtaagagc tgtaagcatc
     1981 tccagcgcga catttgggtt gctgctaaca aaggaaagga aatgctcgcg cgaaagcaca
     2041 gccagccgcg catcctccgc aacccgcgcg tcagctgaac gcggcttccc atcgagcaag
     2101 gccatttccc caaaaaagtc gccacggcgc aattcggtaa gcgttacctc atgcccatcc
     2161 ttcgttcgca cgcagatccg aaccttcccc tgctcgatta aatacatcgc gtcgccttcg
     2221 tcacccgtgc gaaatagaac cgcgcctgct ttgcaatcga ggctctcgag cagttcgcac
     2281 aattcatggg ccgcctcggt atcaagcgac tcaaacaatg gcacatggcg tagcgtctcg
     2341 acgttcattt gctgaagagc gatggaacgg tggtcacaat aaccgcaatg cgccgctgcg
     2401 agaagccaca aatcactgac aaaacgacgc ttttggacat cggaaattga cttggacagg
     2461 ttcgctttta gtttgataaa cgcgtttgct gcgcgtttcg acccgtgaaa aacgtcctct
     2521 tcgtctgcac aggcaacatt tgtcggagcc cgattgcgga ggggcttttt cgccgattga
     2581 ctggcaaccg gaaggacatc gaagtcgcat cagccggcgt acatgcggtt cgcggccagc
     2641 cgccaagcct gtacgccgta gaagtctgcg cagcggaagg cacagatatc agcggtctgc
     2701 gcagccaacc gctgactgga gcgctagttg atcaagcgac gcacatattt gccatgaccg
     2761 gtacgcacgt ggaaacgatc caaacattgt ttccacaaag tgcggaaaaa acattcttac
     2821 tccgtgaatt tgaagaacct ggcacgacgg tgtggcgcga tctgccggat ccaatcggtc
     2881 tcggccgcga ggtttacgaa gattgcgccc gcatcatcaa aaatgctctt cccagtgtgc
     2941 tcgccttcgt agaacagggc gcactcgtcc gacctggtgc gccgcgctcg tcggagatat
     3001 cttcttattc catggaccat ctttctcgcc catttgaccc tggatcgatc gcttccacat
     3061 cggcgccgtg ttacggcgac gcattgcgca aagtggatcc cgcaatcttt gatgcgattg
     3121 ctgcggaaga gaaacgccag cgtgagaaca tcgaactaat cgcctcggaa aatttcacca
     3181 gccgcgcggt gatggaagct cagggcagcg tgatgaccaa caaatatgcg gagggttatc
     3241 cgcggaaacg atggtatggc ggctgcgaaa atgtcgatac ggccgagcag ttagcgatcg
     3301 atcgcgcgaa acggcttttc ggctgcgaac acgtcaacgt gcagccgcac agcggtgcgc
     3361 aggcaaacat ggccgtttac ttcgcgatgc tgaaacccgg cgacaagatt ttggcgatga
     3421 atctggcgca cggcggccat cttacacacg gacatccggc aaatttttcc ggaaaattct
     3481 acgcggtctc gcagtacggc gtgagcgaga agaccgagca aatcgattac gacgccttgc
     3541 agaaacaagc cgaggaagtc cggccggtga tgatcacggc cggcgcatcc gcttatccgc
     3601 gcatcattga tttcccgcgg ctgcgacaaa tcgccgattc agtcggcgcg attctttttg
     3661 tcgacatggc gcatatcgcc ggtctggttg caggcggcca acatcctagc ccgattccgc
     3721 acgcgcagtt cgtaaccacc acgacgcaca aaagtttgcg cggtccacgt ggcggcatcg
     3781 tgatgtgcga agaaaaattc gcgaagcaaa tcgacgccac cgtttttcca ggcgtacaag
     3841 gtggcccgct tatgcacgtc atcgccgcga aagcggtctg ttttcatgaa gcgctgcaac
     3901 cgcaattccg tgaataccag cggcaggtag tcattaacgc gaaagccctc gccgccggtt
     3961 tagccaaaca cggctatcgc atcgtctccg gtggaaccga caatcatctg atgcttgtcg
     4021 atcttcgccc gaaggatctc aacggcaagg aagcgcagga agttctcgat cgcgccggca
     4081 ttacggtgaa caaaaacgcc atcccattcg ataccagctc gcctttcaag cccggcggca
     4141 tccgcgtcgg cacgcccgcg gttactacgc gcggcatgaa agaagaagag atgctcgaga
     4201 tcgccgagct tgctgcggaa gccctcgaca agcgtagcga cgaaggcgcg atcgagaacg
     4261 tgcgcaacaa agttatcgat ctcacgagta gattttcgtt gccaatctag atgcgacggc
     4321 gcgcagcgcg tgctgcaatc aatctttcgg cgctcaaaga cccgccgacg tcaattcgca
     4381 ttattcaatc tgcaaaaatc tcgtaatctg cggatggaat gaatcgcgcg gccgatcaac
     4441 ccgaaccaaa cccgctgcgc gaaggattgt ccgcgcggcc ggtgccacag ccatgcagca
     4501 ttgtaatttt cggcgcgacg ggtgatctca cgcatcgcaa acttgtgccg gcgttatata
     4561 acctggcggc cgacggcgaa ctgccacccg gcgtagtcat cgcaggattt gctcggcgcg
     4621 acaaaagtga cgacgacttc cggcgtgaca ttgaagaatc cacgcgcaag tattcgcgtc
     4681 aacctgtgcg cgacgaaatc tggaacgcgt ttgcgcagtc tattttttat caccggagcg
     4741 agtttggcga tgacgctggt tatgggcggc tggccaaacg tctcgaagag ctcgacaaga
     4801 gccatggcac gcgcggtaac cgtctttttt acctggcggc cggtcctgac cagttcgaat
     4861 cgattctcaa gaacctaaaa gccgcaggcc tgaaccagac ctgcaaagga agctgggcac
     4921 gcgtcataat cgaaaagccg ttcggcactg atctggcctc agcgcgcgaa ctcaatcgcg
     4981 ttgtgcgcaa ttcgttcaca gaagagcaga cctatcggat cgatcatttt ctcggtaagg
     5041 aaacggcgca aaacattctc gtcctccgat tcgccaacgc gatcttttca ccgctgtgga
     5101 acacgcacta catcgataat gtgcagatca cagcggcgga aacactcggg gtcgggactc
     5161 gggccggtta ttacgaagac gcaggcgcgt tgcgcgacat ggtacaaaat catctgattc
     5221 agctcctatg tctcgtcgcg atggagccgc ctactgatct gagcgccgac agtatccgcg
     5281 gcgagaaagt caaagttgtg cgctcgctgc ggcgctggtc gcggagcgaa atcgaggcca
     5341 atgtcgtgcg gggccaatac accaaaggcg ctattcacgg cgaaccggtg ctcggttacc
     5401 ggcaggaaca aaacgtaaat ccggattcgc agaccgagac gtttgtcgcc ttgcgtttgt
     5461 tcatcgacaa ctggcgctgg gcagacgttc cggtgtacat gcgagtgggc aaacggcttc
     5521 cgaaatcggc gactgaaatt tccattcact tcaaaaaagc gcctgcggtg ttgttcaata
     5581 aagatctgcg ggacctcaac gtgctggtca ttcgtattca acccgatgaa ggaatctcgt
     5641 tgcgcattca tgccaaggta cccggtacaa gctttcgcat cgagccggtt aaaatggatt
     5701 ttcattacgg aacatctttc ggcaaaccca gcccggaagc gtacgaacgt cttctgctcg
     5761 acgcgatgag cggcgatgcc acgctctttg cgcgtagcga cgaggtcgaa caagcctggg
     5821 ctttcatcga tccaatcgag gaagcgtggc acgcaaagaa agatgccccg gagttatgct
     5881 tttatcctgc cggatcgtgg ggaccggaag ctgccgatga tttgctcgcc cgcgacggac
     5941 gcgcgtggag gagattataa accccgttat gcctgcggct gctgaaacat actcgttagg
     6001 cgctccggtc gagctcggaa agattgagca ggagctgaaa aagctctggc aagaaggcga
     6061 aggcgcaatg acccgcgcat cgcttatgaa tcttgtcgtt tacagcgacc aaccgggttc
     6121 gctgaacaac aacacgcagc tgatggcgaa aattaccgaa aatcacgcct gtcgcgcgat
     6181 tgtcaccgaa gccgattgcc ggtccgaaga aaatcgcgtg gacgcctgga tcagcgcgca
     6241 ttgccacgtg agcagtgccg gaaacaagca agtttgctcc gaacaaattt cattcctgct
     6301 caaaggcgga tgcgccacac aattgccgag catcgttctt tccaacctgg attcggatct
     6361 tccgctttat ctttggtggc aggaagaatt tcgcgaaccg atggatccac aactttggac
     6421 atgggttgat cgagttatct atgacagtca tggctggagc gattttcgct cacaaacacg
     6481 tttacttgag ttgatgcagg cggagaccaa ccagcgaatt gtgctttgcg acttgaattg
     6541 gacgcggctg gacaatcttc gcttcgcgct cgcgcaattc ttcgatcatc ccgcttcgca
     6601 tcaccgcctg agcaagatga gcaaggtgcg aatcgatttc gcgcctgcgt tcagatccac
     6661 cgcgatcttg tttgcaggct ggctgggagc gcaattgaat tggcatatcg aagaggtgaa
     6721 atctccacgt gagttgcggt tcaccggagc gtcagcgcga cgcatcgacg tcgacctgcg
     6781 cgagcgcaac ggcgaaccgg ttcacgaagt cgcattgacc agtggtaacg tggaatttcg
     6841 cgtcacgtac gcggattgcg gtgatctcct ggaaatctca cgcacacaga acaacgaaaa
     6901 agggatcccg cagctaatgc ccgctggaaa caacgatcct gtgggcctga tcagcgagga
     6961 actgattcgc ggtgggccgc accgcgttta cttgaacgct ctcaattgcg ttcgggattt
     7021 actgtagcca ccgccctgtg ggcggtcctt tctgcctaac caacgacggg ccacag
//
LOCUS       DATDAJ010000392         2283 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2193221, whole genome shotgun sequence.
ACCESSION   DATDAJ010000392 DATDAJ010000000
VERSION     DATDAJ010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2193221"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..1395
                     /gene="hutI"
                     /locus_tag="VIS53_09755"
     CDS             145..1395
                     /gene="hutI"
                     /locus_tag="VIS53_09755"
                     /EC_number="3.5.2.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR01224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050480 - imidazolonepropionase activity
                     [Evidence IEA];
                     GO_process: GO:0006548 - histidine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazolonepropionase"
                     /protein_id="HEY5768107.1"
                     /translation="MSFLAVLHASQLVTLSGPKRPRVGRELSALAMIRDGGMLIRDGK
                     IESVGPSDEIEKNVGDAEVVDAGGRVVMPGFVDAHTHLVFAGNRLDDFERRARDETYE
                     QIAKAGGGIWSTVEKTRAASEADLLKPAKKHANWFLRCGTTTVEAKSGYGLTVKDELK
                     ILRVMRRLKEAVPLEIVPTFLGAHAVPRKLSPDEYLDVVITEMLPRVATEKLAEFCDV
                     FCERGYFNIDQSRKILSAAKNGGLSLRGHVDQLTNSGGAKLMAEMGATTADHLEQTDE
                     QGIAALKKANVQPVLLPGSVYALGSTRYPRAREMIEAGLAVVLATDFNPGSSPTPSMP
                     MALSLACTQMKMSPAEAITASTVNAAYSINRGERIGSLEPGKLANFVIFDCEDYRELP
                     YWFGIPHTHSVYVRGECVSRSSGL"
     gene            1421..1795
                     /locus_tag="VIS53_09760"
     CDS             1421..1795
                     /locus_tag="VIS53_09760"
                     /inference="COORDINATES: protein motif:HMM:NF019932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY5768108.1"
                     /translation="MTAEEELLKLEKEFAEAIVKNDLEGIGRLVADDWIIIDPDAGIV
                     DRARFFEVIKSGALTHDMMESEDFRVRIYGDSAVVTGVTRTKGKFMGQEFSTQERATD
                     VFVKRDGRWQCVLTHLTRFTKK"
     gene            1865..>2283
                     /locus_tag="VIS53_09765"
     CDS             1865..>2283
                     /locus_tag="VIS53_09765"
                     /inference="COORDINATES: protein motif:HMM:NF017508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor family protein"
                     /protein_id="HEY5768109.1"
                     /translation="MKVEVEKQPGSVSKLQIELPADEVAKEWDAIANSFARFAKIPGY
                     RPGKAPRAVIDKRFRKEIQDELTKKLVSKSYHEAVEQEQLRVASLTNIEDIEFGEDKS
                     MRFRATVVTAPEFELPDYKEIPVELPDTKISEADVEEA"
BASE COUNT          561 a          559 c          689 g          474 t
ORIGIN      
        1 agcagggcga gatcactgct tgtcatgttg agcgaagcgg aacatctctg atagccggct
       61 acgaaagaat taatcagaga ttcttcactt cgttcagaat gacaatgcct ttctgtgtag
      121 ttgcgcttca acggtaacga acaaatgagt ttcctcgccg tcctgcacgc ttcacaactc
      181 gtcacgctga gcggccccaa gcgcccgcgt gtcggaagag agttgtcggc gctcgcaatg
      241 attcgcgacg gcggaatgct catccgcgac gggaagatcg agagcgtcgg tccgagtgat
      301 gagatcgaaa agaatgttgg cgacgcagaa gttgtcgatg ccggtggacg cgtcgtgatg
      361 ccgggattcg tcgatgcgca tacgcatttg gttttcgccg gcaatcggct cgacgatttc
      421 gaacgccggg cgcgagacga aacgtacgag cagattgcga aagccggtgg cggaatttgg
      481 tcaaccgtag aaaaaacgcg tgcagctagc gaagctgatc ttctcaagcc ggcaaaaaag
      541 catgcgaact ggtttctgcg ttgcggtact acgacggtcg aagcgaagtc gggctacggt
      601 ctgaccgtca aggatgaatt gaagattttg cgagttatgc gccgactgaa ggaggcggtg
      661 ccgttggaaa tcgtgccgac ctttctcggt gcgcatgccg ttccgaggaa actctcgccg
      721 gatgaatatc tggacgttgt gatcacggaa atgttgccgc gcgtggctac ggaaaaattg
      781 gctgaatttt gcgacgtttt ttgcgagcgc ggctatttca atattgatca gtcgcgcaaa
      841 atcttatccg cagccaaaaa cggcggattg agtttacgcg gccacgttga tcaactaaca
      901 aattccggcg gcgcgaagtt gatggcggag atgggtgcaa ccacggcgga ccatctggag
      961 caaaccgatg agcaggggat cgccgctttg aaaaaggcga acgtgcaacc ggtgttgctg
     1021 ccgggttcgg tttacgcgct cggatccacc cgctatccgc gcgcgcgcga aatgatcgag
     1081 gccggactcg ccgtcgtgct cgcgaccgat ttcaatcccg gatcgtcgcc aacaccgagc
     1141 atgccgatgg ctctgtccct cgcgtgcacg cagatgaaaa tgtcgcctgc ggaagcgatc
     1201 accgcgtcaa ccgtaaacgc agcatacagc atcaaccgag gcgagaggat tggctccctc
     1261 gaacctggca aacttgcgaa tttcgtgatc ttcgattgcg aagattatcg tgagttgccg
     1321 tactggtttg gcattccgca cacgcattcc gtttatgtga gaggcgaatg tgtttcaagg
     1381 agcagcggtc tctagtcccc cgttagaaag ggatcaaaga atgacggcag aagaagaact
     1441 cttgaagctg gaaaaagaat tcgcggaggc aatcgtaaag aacgatctcg aaggtatcgg
     1501 ccgacttgtc gccgatgact ggatcatcat tgacccggac gcaggaatag ttgaccgagc
     1561 gcgctttttc gaggtcatca aatcgggtgc cttgacgcac gacatgatgg agtccgaaga
     1621 tttccgggtc cgcatttatg gggacagcgc agtggttacc ggggtaaccc gcacaaaggg
     1681 caaattcatg ggacaggagt ttagcacgca ggaacgggcc acagatgttt ttgtgaagcg
     1741 cgatgggcga tggcaatgcg tgctgacgca tctcacacga tttactaaaa agtgaggcgg
     1801 cgcgccctac caatttcgag ggcagatttt gcggtgtgac tcagcgccac tacagtgatt
     1861 cccaatgaag gttgaagtgg aaaagcagcc gggttcggtc tcgaagctgc agattgaatt
     1921 gcctgccgac gaggttgcaa aggaatggga cgcgattgca aacagtttcg cgcggttcgc
     1981 gaaaattccg ggataccggc cgggaaaggc accccgtgcg gtcatcgaca aaagattccg
     2041 caaggaaatc caggacgaac tcacgaagaa gcttgtctca aaaagttatc acgaagcagt
     2101 cgaacaagag caattgcgcg tggcttcgct gacgaacatt gaagacattg agtttggcga
     2161 ggacaagtcg atgcgcttcc gcgcgactgt ggtcaccgcg ccggagtttg agctccccga
     2221 ttacaaggag attccggtgg aattgccgga cacaaagatt tcggaagcag atgtggaaga
     2281 ggc
//
LOCUS       DATDAJ010000393         2925 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2194681, whole genome shotgun sequence.
ACCESSION   DATDAJ010000393 DATDAJ010000000
VERSION     DATDAJ010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2194681"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VIS53_09770"
     CDS             <1..330
                     /locus_tag="VIS53_09770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HEY5768110.1"
                     /translation="GKEVYKQAVIAMLNAAKKALELAGLSIDDIACVIPHQANLRIIE
                     AIADRLGISRDKMFVNLDRYGNTSAAAVAIALDEANRTGRIKRGDYVLMVVFGGGLTW
                     ASTVIEW"
     gene            complement(452..901)
                     /locus_tag="VIS53_09775"
     CDS             complement(452..901)
                     /locus_tag="VIS53_09775"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY5768111.1"
                     /translation="MATTPRVKIPFSGGCACGAIRYECSSEPVTMFKCHCRSCQQMTG
                     SGFAPAALVPAEAFRVTRGQMRYHFTPSAAGGQHKRGFCAECGSLLTGGENSERPTRN
                     VGVTAGSLDDPSWFQPQMDIFVSDAQPWDQMDPAIPKFEQYPPLAKE"
     gene            complement(901..1353)
                     /locus_tag="VIS53_09780"
     CDS             complement(901..1353)
                     /locus_tag="VIS53_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY5768112.1"
                     /translation="MAARTNTILLHRVLRTTPEKIYKAFLDPDAMAKWLPPDGFTAKV
                     HQMDAKVGGTYKMSFTNFTTNKSHSFGGTYVELTPHERIRYTDKFDDPNLPGEMQTTI
                     TLTKVSCGTDLNIVQEGVPAVIPAEACYLGWQESLAQLAKLVEPEIPD"
     gene            complement(1437..1883)
                     /locus_tag="VIS53_09785"
     CDS             complement(1437..1883)
                     /locus_tag="VIS53_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5768113.1"
                     /translation="MSTTKDTRTIEPYLFFNGRCEEAIEFYRKTLGAEVEMMMRYKES
                     PEPPPPGTVPPDFENKIMHSSFRIGQTTVMASDGCSADRASFEGFSLGLHVSSEAEAD
                     RTFNALTDGGKIKMPLTKTFWSPRFGMLEDRFGIGWMINVAPPEQN"
     gene            complement(1922..2281)
                     /locus_tag="VIS53_09790"
     CDS             complement(1922..2281)
                     /locus_tag="VIS53_09790"
                     /inference="COORDINATES: protein motif:HMM:NF018893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEY5768114.1"
                     /translation="MAHYVDGFVIPLPKKNVSDYRRGAQKAGKVWRGHGALEFRECVG
                     DDLDVKMGKPFTRGMKTKPGETVLFSYIVFKSRAHRDRVNAKVMRDPRLAKLMKSPMP
                     FDVKRMLYGGFKTIVEA"
     gene            complement(2306..2707)
                     /locus_tag="VIS53_09795"
     CDS             complement(2306..2707)
                     /locus_tag="VIS53_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEY5768115.1"
                     /translation="MNTQNQNGYMLLFRGNDWTKSLSPEEKQKVTDQWMAWFRRLTDQ
                     GKAIAGSPLEPEGKIVSGKNRVVSDGPFAESKEAIGGYFLLDVASFDDAVAIAQECPG
                     LPYGVQVEIRAVAGECPLASELKHEAQFANA"
BASE COUNT          604 a          815 c          766 g          740 t
ORIGIN      
        1 ggcaaggaag tgtacaaaca ggctgtcatc gcgatgttga acgcggccaa aaaagcactc
       61 gaactggcgg ggctttccat cgatgacatc gcctgcgtca ttccgcatca ggcaaactta
      121 cgaatcatcg aggcgattgc cgatcggctc ggcatttcgc gggataaaat gttcgtgaac
      181 ctcgatcgat acggcaatac ctccgctgcc gctgttgcga ttgcgctcga tgaagcgaac
      241 cgtaccgggc gaatcaaacg cggcgattac gtcctgatgg tcgtgttcgg tggcggcctc
      301 acgtgggcca gcacggtgat tgagtggtaa tcagtcgcac tgcgcgcccg ttggaacagg
      361 agaaatttct tacgctcgct gagccattag ccacgaatcc aagacagtcg aatcaatcca
      421 atcaattcgt gccggtttgt gaaatcggtg cctattcttt cgctaacggc ggatactgct
      481 cgaatttcgg tatcgccgga tccatttgat cccacggttg cgcgtctgaa acgaaaatat
      541 ccatctgcgg ctgaaaccag ctcggatcat caagactccc agctgtaacg cctacgttac
      601 gcgttgggcg ctcactgttc tcgcctccgg tcagtagaga gccacactct gcgcagaagc
      661 cgcgtttgtg ctggccgcca gccgcgctgg gtgtgaaatg gtaacgcatt tgaccgcgtg
      721 taactcgaaa agcctctgcc ggaaccaacg ctgcgggagc aaatccgctg ccagtcattt
      781 gttggcaact gcgacaatgg catttgaaca tcgtgaccgg ctcggagctg cattcgtagc
      841 gaatcgcgcc acacgcgcaa cctccagaaa atggaatttt cactcttggg gttgttgcca
      901 tcaatctgga atctcgggct cgaccagttt cgccaattga gccagtgatt cctgccagcc
      961 gagatagcac gcttcagcag gaataacagc gggaacacct tcctgcacga tgttcaagtc
     1021 agttccgcag gagaccttcg tcaacgttat cgtcgtctgc atttcgccgg gcagattcgg
     1081 atcgtcgaat ttgtcggtgt agcgaatccg ttcgtgcgga gtcaactcaa cgtacgtccc
     1141 gccgaaggaa tgactcttgt tcgtcgtgaa attcgtgaac gacattttgt aagtgccgcc
     1201 aactttggcg tccatttggt gcaccttggc ggtgaatccg tccggcggaa gccatttggc
     1261 catcgcgtcg ggatcgagaa atgccttgta aattttttcg ggtgtcgttc gaaggacacg
     1321 gtgaagtaga atcgtgttcg tcctcgctgc cataatatct ttcctttcag tcgatttgtt
     1381 gtgttccgtt ctgagcacac ttcggaaagt ctgctcttgg tgtttcttgc caggagtcag
     1441 ttctgctccg gcggcgcaac gttaatcatc cagccgatcc cgaaccggtc ttccagcatt
     1501 ccgaagcgag gcgaccaaaa ggtcttcgta agcggcatct tgatttttcc accatcggtc
     1561 aatgcgttaa aagtccgatc ggcttctgct tcactggaga catggagtcc gagggaaaaa
     1621 ccttcaaagc tagctctgtc ggccgagcag ccatcggacg ccattacggt ggtctgcccg
     1681 attctgaaac tggagtgcat gatcttgttc tcgaagtcgg gtggaaccgt tcccggcggt
     1741 ggcggttcgg ggctttcctt ataacgcatc atcatttcga cttctgcacc gagtgttttc
     1801 cgataaaatt cgatcgcttc ttcgcagcgg ccgttgaaga acagataggg ttcaatggtt
     1861 cgagtgtctt ttgttgtgct cattatttta cttggctgat tttttccact aagacgaacg
     1921 gtcacgcttc gacgatggtc ttgaatccac cgtagagcat gcgctttaca tcgaagggca
     1981 tcggggattt catcaacttc gccaaacgcg gatctctcat cacctttgcg ttaacgcgat
     2041 cacggtgcgc gcgcgacttg aacacgatgt aggagaacaa taccgtctcg ccgggcttgg
     2101 ttttcattcc gcgtgtaaac ggttttccca ttttgacgtc cagatcgtcc ccgacgcact
     2161 cgcggaattc tagcgcacca tgacctcgcc ataccttgcc tgccttctgg gccccgcggc
     2221 gatagtcgct cacgttcttc ttcggcagcg ggataacaaa tccgtcaacg tagtgagcca
     2281 tgagagattc tccggctggg ttgcgtcatg cgttcgcgaa ctgcgcctca tgcttaagtt
     2341 cgctagccag cggacattcg cccgcaacgg ccctgatttc cacctgcacg ccgtacggca
     2401 agccggggca ttcctgcgcg atcgccaccg cgtcatcgaa actggcgacg tcgagcagaa
     2461 aatagccgcc gatcgcttcc ttcgattccg caaatgggcc gtccgacacg acgcggtttt
     2521 ttcccgacac gatcttgcct tcgggctcga gcgggctccc agcgattgct ttaccctgat
     2581 ccgtcagccg tctgaaccag gccatccatt gatctgttac tttttgtttt tcctcgggcg
     2641 agaggctctt ggtccaatcg tttccgcgaa acagcagcat gtatccgttc tgattttgtg
     2701 tgttcatatt ctgtggttaa tggttgtgag tttaactgtt gtcgagttta agcgattaca
     2761 agctgttctt ctcgagccaa ttcacgcgcg cggatgtcca gcggacattc ttgagccact
     2821 ggccgcactt caagtgaccc gccataagct aggcccgggc tgctctgcgc aatggcaatg
     2881 gcttcttcga tcgtttccac gtccaacatc agatagccac caata
//
LOCUS       DATDAJ010000394         3577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2218698, whole genome shotgun sequence.
ACCESSION   DATDAJ010000394 DATDAJ010000000
VERSION     DATDAJ010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2218698"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="VIS53_09800"
     CDS             complement(<1..252)
                     /locus_tag="VIS53_09800"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY5768116.1"
                     /translation="MSKSIRGSCLCGGVRFEVDPPFIQASHCHCERCRKHSGTAVCTQ
                     ARVLREQFRLLQSKELIKAYGKSEGAVKAFCSNCGSSLFG"
     gene            complement(306..1784)
                     /locus_tag="VIS53_09805"
     CDS             complement(306..1784)
                     /locus_tag="VIS53_09805"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEY5768117.1"
                     /translation="MRLFSDCMRTERLQVRNFIGGEFVEPISGKYLDNIEPATGKPYS
                     QVADSDAHDVDLAVTAAEKAFCDWSKKPAAERSNFLLRIADLIERYLEKFARAESIDT
                     GKPISLARSMDIPRAISNFRFFATAILHSESEAHITDNVAFNYTLRQPRGIAGLISPW
                     NLPLYLLSWKIAPAIAVGNTAIAKPSELTPMTAYMLCEIAREAGLPNGVLNVVHGTGP
                     NVGSAITAHPKINTISFTGGTATGRKVAEACAPLFKKVSLELGGKNPNIIFADADLDA
                     AIAGSVRSSFANQGQVCLCGSRVFVERSAYKDFVERFIERTAQLCMGDPLEEKTEQGA
                     IVNKTQLEKVKFYVDLAQKEGGKIALGGSAPQAPNERCREGYFFQPTVITGLSVSCRT
                     NREEIFGPVVTITPFDSEEEVINHANDVEYGLSSSVWTQNLSRAHRVAERINTGTVWV
                     NCWLVRDLRVPFGGMKQSGVGREGGEEALRFFTEAKNVCIAK"
     gene            2043..>3577
                     /locus_tag="VIS53_09810"
     CDS             2043..>3577
                     /locus_tag="VIS53_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768118.1"
                     /translation="MTVLMNQKNAVANITETGKPSGSNASKVSSRRKFLGQVGVVLTG
                     GAVFGKGVLASAQSSETALREGIQVPRPTIDPRIRRCFVIRVETANTEAHIPVPPHTT
                     NGDEGRYRDKCGTYSKGLLQEGIGLVSLHAFQTFKRALNSGHPADFENIIMGGTRRLN
                     GPQGGLAFGLEGSDAVQFGNAPCPDNQVDAVVVPPAPALASAAYGTELIELYWASLLR
                     DVPFTDYVSNASVAEAAQELSAMPSYAGPRDNHGNVTPDLLFRGGYPGETIGPYISQL
                     GIIPSFLGAQEMNQQMVTYAAGIDYMMDAATFQQVQNGINTGLQNQLDPQPRYLNSGR
                     GLGAYTHLDVLYQAYFTAYLVLNTIGAPLNPGNPYANSRTQNGFGTFGQPDFAAMVAA
                     IAAFALNCVWYHKWYVHLRHRPESGGAIVRQILTGHGGTLDGRVNDNVLNSVAVQRSF
                     ARYGDYFLSQAFPEGSPTHPAYPTGHGAVAGACITILKFFFDGDFVIPHPVVPSSDGL
                     SLLP"
BASE COUNT          768 a          990 c          988 g          831 t
ORIGIN      
        1 gccgaataaa cttgagccgc aattcgaaca aaacgctttc accgcgcctt cgctttttcc
       61 ataggcctta atcaattcct tgctctgaag cagacggaac tgctcgcgca gcacacgtgc
      121 ctgagtgcaa acggccgttc cggaatgctt ccggcaacgt tcgcaatggc agtggctcgc
      181 ttgaatgaat ggcggatcaa cttcaaaccg cacgccgcca cacaggcaac tcccgcgaat
      241 gctcttgctc attcacgaca ctcgacaatc aactatcaac tctcaacttg acccgactca
      301 aaagattact tcgcgatgca gacgttcttc gcttcagtga aaaagcgaag cgcttcttcg
      361 ccgccttcgc ggccgacgcc gctttgtttc attccgccga atgggacgcg gagatcgcgg
      421 accagccagc aatttaccca gaccgtgccg gtgttgattc gttcggcgac gcgatgggcg
      481 cggctcaggt tttgcgtcca gacgctcgat gagaggccgt attcgacgtc attggcgtga
      541 ttgatcactt cttcttcgct gtcgaagggc gtgattgtta cgaccgggcc gaaaatttct
      601 tcgcgatttg tacggcatga aaccgacaac ccggtaatga cggtcggctg gaagaaataa
      661 ccttcgcggc aacgttcgtt aggcgcttgc ggcgcagaac cgccgagcgc gattttgccg
      721 ccttctttct gcgcgagatc gacatagaac tttacttttt ccagctgcgt cttgttcacg
      781 atcgcgccct gctcggtctt ttcttccagc gggtcgccca tgcacaactg tgccgttctt
      841 tcgatgaagc gctcgacgaa atccttgtaa gccgatcgct cgacaaacac gcgcgacccg
      901 cacaagcata cctgtccctg gtttgcgaat gatgaacgca cgctgcccgc gatggcggcg
      961 tcgagatcgg catcggcaaa aatgatattg ggatttttgc ccccgagctc gagcgacacc
     1021 tttttgaaca acggcgcgca cgcttcggcg actttgcgcc ctgtggcggt gccgcccgtg
     1081 aatgagatgg tgttgatctt cggatgagcg gtaatcgccg agccgacatt cggccccgtg
     1141 ccgtggacga cgttgagaac tccatttggg agacccgctt cacgcgcgat ttcgcagagc
     1201 atgtaagccg tcatcggcgt tagctcgctc ggctttgcga tggcggtgtt tccgacagcg
     1261 atggccggcg cgattttcca actcaacaga tagagcggga gattccatgg cgaaatcagt
     1321 ccggcgatgc cgcgtggctg acgcagtgtg tagttgaacg ccacgttgtc ggtgatgtgc
     1381 gcttccgatt cggagtgcag aatcgccgtg gcgaagaagc gaaagttgga gatcgcacgc
     1441 ggaatatcca tcgaacgggc gagtgaaatc ggcttgcctg tatcgattga ctcggcgcgc
     1501 gcgaatttct ccagatagcg ctcgatcaaa tcggcaattc gcagcagaaa gttcgaccgt
     1561 tcggctgccg gtttttttga ccaatcgcaa aacgctttct cagctgcagt aaccgcaaga
     1621 tcaacgtcgt gtgcgtcgct gtccgcgacc tgcgaatacg gtttaccagt cgccggttcg
     1681 atgttgtcga gatattttcc gctgatcggt tcgacgaatt cgccaccgat gaaattgcgg
     1741 acttggagtc gctcagtgcg catgcaatcg gaaaataaac gcatactgga aggttcgcga
     1801 attgcgaagg agcattgggt ccaggcggta ctggcatttg tatggcgtgc tcgtgtattc
     1861 gcagccgccc cgataaagca tctatggctt ttaacggtgc gggtcagata aaaccgcagg
     1921 cctgcaggat tattattgtc agtcgcgcaa tagcctggcc agttcggttc ggaccgcaaa
     1981 aaacggctgc tttttgccaa aacctgcatg gctacgcggg ctaaaggccc gtatgaaatt
     2041 ctatgactgt tctcatgaat cagaaaaatg ccgtcgctaa tattaccgaa acaggaaaac
     2101 cttcgggcag caatgcttcc aaagtgtcta gccgacgcaa gtttttaggt caggtcggcg
     2161 tggtactgac gggtggtgcg gtgttcggca agggtgtcct tgcttccgct cagtctagcg
     2221 agactgctct gcgagaaggc attcaggtgc cacgtccgac aatcgatccg cgtataagac
     2281 ggtgctttgt aattcgtgtt gagactgcta acacagaagc tcatattccc gttccgcccc
     2341 acacaacgaa cggcgatgag gggcgctacc gcgataagtg cggcacctac agcaaaggcc
     2401 ttcttcagga gggtatcggc ttggtgagtc tgcatgcctt tcaaactttc aaaagggctt
     2461 tgaatagtgg ccacccagcg gatttcgaaa acattatcat ggggggcact cggagattga
     2521 acggcccgca aggcggcctc gctttcgggt tggaaggcag cgatgccgtg cagtttggca
     2581 acgcgccatg tcccgacaat caagtggacg cagtagttgt cccgcctgct ccagccctgg
     2641 ccagtgcagc atacgggacg gaactgattg agctgtactg ggcgtcgcta ctccgcgacg
     2701 tccctttcac agactacgtt tcgaatgcga gtgttgctga ggcggcacaa gagctttcag
     2761 cgatgcccag ctacgcaggc ccgagagata accatggcaa tgtcactccg gatctgttgt
     2821 tccgtggcgg ctatccaggc gagacgattg ggccttacat ctcccagttg ggcataatcc
     2881 cgagttttct gggcgcacag gaaatgaacc agcagatggt cacctacgca gccggaatcg
     2941 actacatgat ggacgctgca actttccaac aagtgcaaaa tggcatcaat actggactgc
     3001 aaaaccaatt ggatccgcaa cctcgttacc taaatagcgg ccgcggtctc ggcgcatata
     3061 ctcatctgga tgtgctgtat caggcttatt tcacggcgta cctcgtcctt aacacgatag
     3121 gtgcgccgct gaatccggga aatccttacg ctaactccag gacgcagaat ggttttggca
     3181 ccttcggtca gcccgacttc gcagcgatgg tggcggcaat cgctgccttt gcactgaact
     3241 gcgtttggta tcataagtgg tatgtccatt tgcgtcaccg tccggaatcc ggcggcgcca
     3301 tcgtccgcca aattctgact ggtcacgggg gaacgctcga tggccgtgtc aacgacaatg
     3361 ttctcaactc ggtagctgtg caaaggagct ttgcaagata tggcgattac tttctttctc
     3421 aggcattccc tgaaggttcg ccgacgcatc cggcttaccc taccgggcat ggcgcggttg
     3481 cgggcgcttg cattaccatc ctgaaatttt tcttcgacgg tgatttcgtg attccccatc
     3541 cagtcgtgcc tagcagcgac ggactgtcac tgttgcc
//
LOCUS       DATDAJ010000395         2718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2223963, whole genome shotgun sequence.
ACCESSION   DATDAJ010000395 DATDAJ010000000
VERSION     DATDAJ010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2223963"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..206)
                     /locus_tag="VIS53_09815"
     CDS             complement(<1..206)
                     /locus_tag="VIS53_09815"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY5768119.1"
                     /translation="MIKFLKGRPTHCRIDHAAVRWNLRQIKKTIGPRVKILSMVKANA
                     YGHGAVEIARTLAKSGSDAFGVATV"
     gene            complement(237..557)
                     /gene="metG"
                     /locus_tag="VIS53_09820"
     CDS             complement(237..557)
                     /gene="metG"
                     /locus_tag="VIS53_09820"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase subunit beta"
                     /protein_id="HEY5768120.1"
                     /translation="MISIDDFRKVELKVATVKSAEVHPNADKLIVLQVDLGSEQRQIC
                     AGIRNHYTPEELVGKQVVVVANLETAKLRGLESQGMLLAASDDGRVILLTPEKPVAAG
                     ALVK"
     gene            696..1121
                     /locus_tag="VIS53_09825"
     CDS             696..1121
                     /locus_tag="VIS53_09825"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HEY5768121.1"
                     /translation="MAKSLSGTKSHDNLKHAFAGESQANRRYLYFARVADIEGYPDVG
                     GLFRDTSEAETGHAFGHLDFLKEVGDPCTGVPIGTTSKNLKSAVEGETYEYTEMYPGF
                     AKTARDEGLSELAEWFETLAKAEKSHAGRFTKGLDTLGS"
     gene            1287..1862
                     /locus_tag="VIS53_09830"
     CDS             1287..1862
                     /locus_tag="VIS53_09830"
                     /inference="COORDINATES: protein motif:HMM:NF023432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HEY5768122.1"
                     /translation="MKKIVLDDILGFAAYEQVREKFRNDIIDKKKKRRIALGERVSVV
                     FENRDTVTFQIQEMLRAEKITDLDKIREEIAVYNELVPDTDELSATLFLEIEDQSHLR
                     EDLLKFLGIDEAVFLKVGERSIPGRFEEGHSKEDKISAVQYVRFTFDPQTRQAFRAGE
                     RAELIIDHPNYKARAVLAPDAQQSLAEDLVA"
     gene            1865..2257
                     /locus_tag="VIS53_09835"
     CDS             1865..2257
                     /locus_tag="VIS53_09835"
                     /inference="COORDINATES: protein motif:HMM:NF013629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEY5768123.1"
                     /translation="MSKARKQPRTTKQLEVVWDAVREDKSHPTADQIYDRVRRKLPNI
                     SLGTVYRNLQKLVADQKLQVLMRGRSQHFDPLVERHQHFICETCDHVYDVLVDNQKEI
                     KPFKLPHEGFKVTSHQLAFYGTCKHCSS"
     gene            2332..>2718
                     /locus_tag="VIS53_09840"
     CDS             2332..>2718
                     /locus_tag="VIS53_09840"
                     /inference="COORDINATES: protein motif:HMM:NF013988.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMMECR1 domain-containing protein"
                     /protein_id="HEY5768124.1"
                     /translation="MVEVNLPADSQRRLVEIARLTLERVACARSFEGAWTTDPYLEKI
                     GYGAFVSLFNKRNLRGCVGTCTPSNPLREVVIEMTEAAATRDRRVKPVRADEIEQIHI
                     DISVISSLTRSSVPLSLEVGKHGLHVA"
BASE COUNT          661 a          718 c          738 g          601 t
ORIGIN      
        1 acggtggcca cgccaaaagc atcgcttccc gacttggcta gagttcgcgc gatttcgacc
       61 gctccatgcc cgtaagcatt agccttaacc atcgagagaa tttttacgcg cggtccgatg
      121 gttttcttaa tttgccgcag attccagcga accgcggcgt ggtcgatgcg gcagtgcgtc
      181 ggacgacctt taagaaactt gatcatgtga gatgagggcc ggttcgcgat ggggaattat
      241 tttaccagcg cgcccgcggc caccggtttt tccggcgtca ggagaatcac gcggccatcg
      301 tccgacgctg ccaaaagcat tccctgactc tctagcccgc gaagcttggc ggtttccaga
      361 ttggcgacca ccacgacctg tttcccgacg agttcttcgg gcgtgtaatg attcctaatg
      421 ccggcgcaaa tctgccgctg ctcggagccc aagtccactt gcaacacgat cagcttatcg
      481 gcgttggggt ggacctcggc tgattttacc gtggcaacct tgagctcgac tttgcgaaaa
      541 tcgtcgatcg agatcatgag cattccttac gcagaaagca ccatcgcata gagcaaaaat
      601 aacagaactg cgccaccaaa aaaagcaaag ccgcgcttga ctaggcgcga gcattttatt
      661 agtagtaatt attactaata agaaggagga gttttatggc aaaaagttta tctggcacga
      721 agagtcatga caatctgaag catgccttcg cgggtgagtc tcaagcgaac agacgctatc
      781 tttatttcgc acgggtggcg gatatcgaag gctatcccga tgtcggcggt ctatttcgcg
      841 acacctccga ggcggagacg ggccatgcgt tcgggcatct cgactttctg aaagaagtcg
      901 gcgatccctg caccggcgta cccatcggca ccacctcgaa gaacctgaag tcggcggtag
      961 agggtgaaac ctatgaatac accgaaatgt atccggggtt tgccaagacc gcgcgcgacg
     1021 agggtttatc ggagttggcc gaatggttcg aaaccttagc caaagccgaa aaatctcatg
     1081 ccgggagatt tactaaagga ctcgatacgc taggcagcta atcttacgcg agcagtcaca
     1141 aactggcgga tggagccggc tctggttgcg ctctatccgc cagggttgaa tagccggatt
     1201 cggcgcgttt aaatatacat gaaatcactt ccgtttaagt aacgggtgca gattcagtga
     1261 cctaggatca agctgcagta gtagatatga aaaagattgt tctcgacgac attcttggtt
     1321 ttgccgccta tgagcaggtg cgcgagaaat ttcgtaacga catcatcgac aaaaagaaaa
     1381 agcggcgcat cgcgctgggc gagcgtgttt cggtggtatt tgagaaccgc gacacggtga
     1441 catttcaaat tcaggaaatg ctgcgcgccg agaaaatcac cgatctcgat aagattcgcg
     1501 aagagatcgc cgtttacaac gagcttgtcc cggacaccga tgaactgagc gccacgcttt
     1561 ttctggagat cgaagaccaa tcccatttgc gcgaggatct cttgaaattt ttgggcatcg
     1621 acgaagcggt ctttctgaaa gtcggcgaac gctccatacc gggacgcttc gaagaaggcc
     1681 acagtaaaga agataaaatc agcgccgtgc aatatgtgcg gtttacgttc gatccgcaaa
     1741 cccgccaggc gttccgcgcc ggcgagcgcg ccgagctaat catcgatcat ccgaattata
     1801 aggcccgagc cgtgctggct cccgatgcgc aacaatccct ggcggaagat ctggtggctt
     1861 gatcgtgtcg aaagcgcgca aacaaccaag aacgactaaa cagctcgaag tggtctggga
     1921 cgccgtcagg gaagacaaat cgcacccgac cgccgatcaa atctacgatc gggtgcgcag
     1981 aaagttgccg aacatcagtc tcggcacggt ttatcgcaat ttgcaaaaat tagtcgccga
     2041 ccagaagctt caggtgttga tgcgcgggcg ctcgcaacat ttcgatccgc tggtcgaaag
     2101 acatcaacat tttatttgcg agacgtgcga ccacgtctat gacgtgctcg tcgataatca
     2161 aaaagaaatt aagccattca aattgcctca tgaaggcttc aaggtgacct cgcaccaact
     2221 ggccttctat ggcacttgca agcactgctc ttcctgaccg tttttgcgat tgctcatttc
     2281 ttgtaatccc gtcaccgcgg cgatagactc cgccctgatt cggtggcgag catggtcgaa
     2341 gtaaaccttc cggccgattc ccagcggcgt ctggtggaaa ttgccagact gacgcttgaa
     2401 agggtcgcgt gcgcgcgctc ttttgaaggc gcctggacga ccgatcctta cttggaaaaa
     2461 ataggctacg gcgcgtttgt tagtctgttc aataaaagaa atctacgcgg ctgcgtcggt
     2521 acttgcacgc cgtcgaaccc gctgcgcgag gtcgtgatcg agatgaccga ggccgcggcg
     2581 acacgcgatc gccgagtcaa gccggtgcgc gccgacgaga tcgagcaaat tcacatcgat
     2641 atttccgtca tttcttcgtt gacgcgttca tcggtgccgt tgtctctgga agtcggcaaa
     2701 cacgggcttc acgtggcg
//
LOCUS       DATDAJ010000396         4758 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2240849, whole genome shotgun sequence.
ACCESSION   DATDAJ010000396 DATDAJ010000000
VERSION     DATDAJ010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2240849"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            110..646
                     /locus_tag="VIS53_09845"
     CDS             110..646
                     /locus_tag="VIS53_09845"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEY5768125.1"
                     /translation="MLIGMMGAGKSSVGRCLHCRTRLALLDIDEAVASNFGMSIPEIF
                     AEHGERKFREAETEALHRVRTQEQTIIITGGGIVLRKENIEILRSQGVIVWLDGDEET
                     LFARASRKRNRPLLQTKNPRKAFSQILGSRRPLYANIADIRVDTSVLTDEEVAVAILA
                     KLRKVNPKPESRIPATAS"
     gene            643..1713
                     /gene="queG"
                     /locus_tag="VIS53_09850"
     CDS             643..1713
                     /gene="queG"
                     /locus_tag="VIS53_09850"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEY5768126.1"
                     /translation="MMQISATELKTRFVSFAREIGFDSCRVAACNAPAHANDFREWLR
                     NGAHGEMNYMQRGEEKRCDPEKVLPGTRSIVALALNYFQGDAAHGAAATERTGRIARY
                     AWGEDYHYVIAAKLDKIDEFLRNFDGQQKCYVDTGPVLERDHAAQAGVGWHGKSTMLI
                     DERLGTWFFIAEILTTLELPPDEPVRNRCGTCERCITACPTGAITAAHRLDARRCISY
                     LTIELKTAIPVELRALMGDRIFGCDDCLDACPWNRFARMSRETAFSARRSTTGMSLRE
                     YLDLTEAEFRALFRKSPIKRIKRGGFLRNVCVALGNVGDPSDLPALERAAADPEPLIA
                     EHATWAIQQICDRQKQARPQID"
     gene            1819..3180
                     /locus_tag="VIS53_09855"
     CDS             1819..3180
                     /locus_tag="VIS53_09855"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY5768127.1"
                     /translation="MHQALTTPPLARDAAKKRRQGRRRKIFFGSAGAVLLVIIALIIA
                     GKREKPIPVTTEKAVRRTILQTVSATGKVQPETEVKISPEVAGEITELPVEDGMQVKK
                     GDLLVKIKPDSYKALLEQQEAAISSAKATNLQQKATMLKTEHDFRRSKDLFEKKLISE
                     QEYNAAEAAYDVAKNTYESSLHEIERAQASSSQARDQLSKTTIYSPMDGTVTILNSKL
                     GERLVATNQFAGTEVMRVADLSHMQAVVDVNENDVVNVKLGDKANIKIDAYGDRKFKG
                     VVQQIANTGKTTGTGTQEEVTNFEVKIRVDDPDVALRPGLSCTADIETNMVNDAVAVP
                     MQSVTIRTGDTNLSPEEIEKQKQKVAARDKDDNKAELSNDRLEKQAQKEEREKLAKVV
                     FVKTGNKAHMLKVTTGIADDSYMEIKSGIKPGDEVISGSYSAISRKLKEGAKVAYDKE
                     VAK"
     gene            3177..3947
                     /locus_tag="VIS53_09860"
     CDS             3177..3947
                     /locus_tag="VIS53_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY5768128.1"
                     /translation="MTSDSRSSDPIIIDIENITKDYVMGEEIVHALRGVSLQILSNEY
                     LAIMGPSGSGKSTLMNMLGCLDTPSSGRYEFNGRDVSAMSDDELAAIRNREIGFVFQT
                     FNLLPRADGLRNVELPLVYAGIDSQTRRERAARVLREVGLGDRLHHKPNELSGGQRQR
                     VAIARALVNDPSIILADEPTGNLDSKTGDEIMTLFENLYQRGHTIILVTHEADIANHA
                     RRTVRLRDGLIESDDGGFGGMDNLPVEDPLPADAAVYQ"
     gene            3944..>4758
                     /locus_tag="VIS53_09865"
     CDS             3944..>4758
                     /locus_tag="VIS53_09865"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5768129.1"
                     /translation="MKRFLYELSESWKIAVAQMRSNKTRSTLTALGVVIGIVAVTLMG
                     TAISGIQVGFDKSMAIFGDDVLYVSQWPWKRVDDWWNYRDRKRIKTEYAEPINRIIAA
                     TPNTNLVIAVPTSSLLRSVKNGQSEVSNVLIRGTVSDYLITSTFDFNEGRFFNDVESR
                     GGANVCVIGYDVADALFPSETPIDKSVLINGQPFRIVGVISRQGTFLGLSSLDSIVVM
                     PLPAFQKYFSAKSDSDILVKVKDKTKLAEARDELTGVMRRVRGLPPENKDDFS"
BASE COUNT         1227 a         1241 c         1350 g          940 t
ORIGIN      
        1 agatcgcatc cagagatgtt tcgcttcgct caacatgaca ggaaacaaat ctggctgaag
       61 ccagttgtta atgagatatt cgagggtgat tggcgtcggt aaatcgattg tgctcatcgg
      121 gatgatgggt gccggtaaat cgtccgtcgg acgctgcctg cattgccgaa cgcggttggc
      181 tttgctcgat atcgatgagg ctgttgcctc gaatttcggg atgtcgattc cagaaatttt
      241 tgccgaacac ggtgaaagaa aattccggga agcggaaaca gaagcgcttc accgcgtacg
      301 aactcaagaa caaacgataa tcattacagg tggcggcatc gtgttgcgca aagaaaatat
      361 cgagatttta agaagccagg gtgtaatcgt gtggcttgac ggggacgagg aaacgctttt
      421 tgcgagggcc tcccgaaaac ggaatagacc attgctgcaa acgaaaaacc cgagaaaggc
      481 tttctcacaa atccttggtt cccgcaggcc tctttacgca aacatcgcgg atatccgagt
      541 cgatacctcg gtactcacgg atgaagaagt cgccgtggcg attctggcga aactcaggaa
      601 agtgaatcct aaacccgaat cacggatccc ggctacggcg tcatgatgca gatttcggca
      661 acagaactga agacgcggtt tgtctctttt gcgagagaga ttgggtttga ttcgtgtcgc
      721 gtggccgcct gcaacgcgcc agcgcacgca aatgactttc gcgaatggct gcgcaacggc
      781 gcacacggcg aaatgaatta catgcaacgc ggcgaggaaa aacgttgcga tccggaaaag
      841 gttctgccgg gcacgcgctc gatcgttgct ttggcgttaa attattttca gggagacgcg
      901 gcccacgggg ccgcagctac agaaagaaca ggccggatcg cgcgatacgc ctggggcgag
      961 gactatcact atgtaatcgc ggctaagctc gataaaatcg acgagtttct tcgcaacttc
     1021 gacggacagc agaaatgtta tgtcgacacc gggccggtgc tggaacggga tcatgccgcg
     1081 caagctggcg ttggctggca tggcaaaagc accatgctta tcgatgagcg gctcgggacg
     1141 tggtttttta tcgctgaaat tttgaccacg cttgaattgc cgccggatga gccggtacgg
     1201 aatcgctgcg gaacgtgcga gcgttgcatc acagcctgtc caacaggcgc gattactgct
     1261 gcgcatcggt tggacgcgcg tcgttgcatt tcttacctaa cgattgaact gaaaaccgcc
     1321 atccctgtag agcttcgcgc gctcatgggc gatcggatct ttggctgcga tgattgtctg
     1381 gacgcctgcc cttggaatcg attcgcccgt atgtcgcgcg aaactgcctt ctcggcgcgc
     1441 cgatcaacca ctggcatgtc gcttcgggaa tatttggact taaccgaagc ggaatttcgc
     1501 gcgcttttca gaaagtcgcc gataaagcga ataaagcgcg gggggtttct acgcaatgtg
     1561 tgtgtcgcgc tcggcaatgt gggcgatcca tccgaccttc cggcgctcga acgcgcggca
     1621 gccgacccgg agccattgat cgcagagcat gccacatggg caattcaaca gatatgcgat
     1681 cggcaaaagc aggcgcggcc gcaaattgat tgaatccaaa ccggccgcag actgcatccc
     1741 accgattgag gggcatgaac gtgcgcgatt ggcgaaagtc taaagaggga tagcttcagc
     1801 cgaagaagcg atcatgccat gcatcaagcc ttgaccactc ccccactcgc ccgtgacgcc
     1861 gcgaagaagc gccggcaggg tcgcaggcgc aagattttct ttggctccgc cggcgcagtg
     1921 ctgcttgtga tcatcgcgct aatcatcgcg ggcaagcgcg agaagccgat tccggtgaca
     1981 acggaaaaag cggtgcgtcg gaccattctg cagaccgtct ccgccacggg caaggtccag
     2041 cccgaaaccg aagtgaaaat ttcgccggag gttgccggcg aaattaccga gctgcccgtc
     2101 gaggatggca tgcaggtcaa gaaaggcgac ctgcttgtga agattaaacc tgattcctac
     2161 aaagcattac tcgaacaaca ggaagcagcg attagctccg cgaaagcgac aaaccttcag
     2221 caaaaagcga cgatgcttaa gaccgagcac gacttccggc gatcaaagga cttgttcgag
     2281 aaaaagctga tttcagagca ggaatacaat gccgcggaag cagcttacga cgtagcgaaa
     2341 aatacttacg agagctcact gcacgaaatc gaacgggcac aggccagctc aagccaggcg
     2401 cgcgatcagc tttcaaaaac cacgatttat tcgccgatgg acggaacagt caccattcta
     2461 aatagcaaac tgggcgaacg cctcgtcgcg accaaccagt ttgccgggac cgaagtcatg
     2521 cgagtggctg atctcagcca catgcaagcc gtcgtggacg tcaacgagaa tgacgtggtg
     2581 aacgtgaaac ttggggataa agcaaacatc aaaatcgacg cgtacggcga ccgcaaattt
     2641 aaaggtgtcg ttcagcaaat cgcgaacacc ggaaaaacga ccggaaccgg cacacaggag
     2701 gaagtgacga atttcgaggt aaaaattcgc gtcgacgacc ccgatgtggc gttgcgcccg
     2761 ggactgagtt gcaccgcgga tatcgagacg aacatggtta acgatgcagt cgcggtaccg
     2821 atgcaaagcg tgacgattcg caccggggac accaacctca gcccggaaga aatcgaaaaa
     2881 caaaagcaaa aagtcgccgc gcgcgacaag gacgataaca aggcggagct cagcaatgac
     2941 cgtctcgaga aacaggccca aaaagaagaa cgcgaaaagc tggccaaggt tgttttcgtc
     3001 aagaccggca ataaagcgca catgctgaag gtgaccacag ggattgccga cgattcctac
     3061 atggagatca aaagcggcat caaacccggt gacgaagtca tctcaggcag ctacagcgca
     3121 atcagccgga aattaaaaga aggcgcgaag gttgcgtacg acaaggaagt cgcgaagtga
     3181 cgagtgacag tcgatcatcg gacccgataa ttatcgacat cgagaacatc acgaaagatt
     3241 acgtgatggg cgaagaaatt gttcacgcac tccgtggcgt gtcgttgcaa attcttagca
     3301 acgaatattt ggcgattatg ggccccagtg gcagcggcaa atcgacactc atgaacatgc
     3361 tcggctgcct cgatacgccc agttccgggc gttacgaatt caacggccgg gacgtttcag
     3421 cgatgagcga cgatgagctg gcggcgattc ggaatcgcga gatcggattt gtttttcaaa
     3481 ctttcaacct tcttccgcgc gccgacggcc tacggaatgt tgagcttccg cttgtttacg
     3541 ccgggatcga ttcccaaaca cgccgggagc gcgccgcgcg cgtgctacga gaggtggggc
     3601 ttggcgaccg tttgcaccat aagcctaacg agctttccgg cggtcaacgc cagcgcgtcg
     3661 cgatcgcgcg agctttagta aacgatccat ccatcatcct ggccgatgaa ccgaccggca
     3721 atctcgattc gaagaccggc gacgaaatca tgaccctttt cgaaaatctg tatcaacgcg
     3781 gacatacaat tattctcgtt acgcatgaag ccgatatcgc gaatcatgcg cggcgcaccg
     3841 tccgcttgcg cgatggacta atcgaaagtg acgacggcgg gttcggtgga atggacaact
     3901 tgccggtgga agatccgctg ccagccgatg ctgcggtgta ccaatgaagc gctttctgta
     3961 cgagctgagc gaaagctgga aaatcgccgt ggcgcagatg cgttcgaaca aaacgcgctc
     4021 aaccctcacc gcgctcggtg tcgttatcgg aattgtcgcc gtgacattga tgggcaccgc
     4081 gatctccgga atccaggttg gattcgacaa aagcatggcc attttcggcg atgatgtgct
     4141 ctacgtctcg caatggccgt ggaaacgtgt ggatgattgg tggaactacc gcgaccgcaa
     4201 aaggatcaaa accgagtacg ccgagccgat caaccgcatc atcgctgcga cgccgaatac
     4261 gaatctcgta atcgcggtac ccacttcaag tctgctgcgc agcgtgaaaa atggccaaag
     4321 cgaagtcagc aacgttctga tcagaggaac ggtctcggat tatctcatca cttcgacttt
     4381 cgactttaat gagggccgat ttttcaacga tgtcgaatcc agaggcggcg ccaacgtgtg
     4441 cgtgatcggc tacgatgtgg ctgacgcgct gtttccttct gaaaccccga tcgacaaatc
     4501 ggtgctgatc aatgggcagc ctttcagaat agtcggggtc atctcacggc agggcacatt
     4561 tttgggatta tccagtctcg attcgattgt ggtgatgccg ttgcctgcgt ttcaaaaata
     4621 tttcagcgcc aaaagcgatt ctgacattct cgtcaaagtg aaggacaaaa ctaagctcgc
     4681 cgaagcgaga gacgagctga ccggagttat gcggcgtgtc cgcggattgc cgccggagaa
     4741 caaagacgac ttcagcat
//
LOCUS       DATDAJ010000397         2849 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2243832, whole genome shotgun sequence.
ACCESSION   DATDAJ010000397 DATDAJ010000000
VERSION     DATDAJ010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2243832"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..1515
                     /locus_tag="VIS53_09870"
     CDS             49..1515
                     /locus_tag="VIS53_09870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768130.1"
                     /translation="MNSETRSFQKTAIPKSPRRLLPNPTFHLCSRSVIKKIFAVCALA
                     CFLGCGSKKGSAEDTTSADSNKPPATVEEAAKALDLATLPLMDGAKSAESRHVANLSY
                     VAPGDPKKALEFQRKAFGAQGWKELPNSSISDQSASAMFARDGFVVSLSVIPFEASGV
                     SVRLLNLGNVKPGKLPVPPGVKAVYQGDSTAMYETDAAVPATADAIRNLFVAQGWVPY
                     GEAGDTDVFKKNAILATVTVSSAPARGGKTMIQYSNQLISSDIPAPQDVEDLRYVDEP
                     PELTFATRNQDAVLDFYRKTLAAAGWKSTMDKMIDVDGKPTMIFRNPAKEMLTLSVPY
                     DYGSGKLGVSVRFQSAAEIAELDRRRKEAAPKLRAAAEAKAAQEAKEAAELAEKNKLP
                     KVAVTLPTDAKDVKQTKDSIKFTVGKGKAKAAVEFFRKQFRDAGWKEKFAAMEGMSGA
                     ASFSKEDGQSVTVTYTDTPISPSEVSLSAMRAELEAAK"
     gene            complement(1649..2161)
                     /locus_tag="VIS53_09875"
     CDS             complement(1649..2161)
                     /locus_tag="VIS53_09875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768131.1"
                     /translation="MLSQKSMNALITLVVALAFGYSANLVAEEESKAVTVVVICDDVA
                     AKKMIHDSLLTHLRARRDLEVVDKGGYSSLIVYAEKTVKDPRNPNGYAFAIAHTNSYE
                     LRLAYKNLQGVDDVKVRAVRTVAERALRDEIGLLRHLNVAHLDGLPNEQLDALTKRIV
                     SDFHEQQKKS"
     gene            2229..>2849
                     /locus_tag="VIS53_09880"
     CDS             2229..>2849
                     /locus_tag="VIS53_09880"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY5768132.1"
                     /translation="MPLLIALLLSKAKDKVTFMNAPANPNKALWEKGDFTRIADTMRE
                     SGEALVQRLGITKGRKVLDLGCGDGTTALPAAKLGADVLGIDIAPNLVEAGNRRAAEH
                     GLTNLKFQEGDASNLEQVPDKSFDLVVSIFGAMFAPKPFEVAKEMVRVTRPGGRIVMG
                     NWIPNDPTLVAQILKISSNYTPPPPEGFVSPVTWGIESNVIERFTAA"
BASE COUNT          682 a          762 c          826 g          579 t
ORIGIN      
        1 aaaaatcgcg ctcgaactga ggctatcccc tcaatatcat cgcgggctat gaattctgaa
       61 actcgttcat ttcaaaagac cgcgattccc aagtcgccgc ggcgactgct ccccaatcca
      121 acttttcacc tctgctctcg cagcgtgata aaaaagatct tcgcggtctg cgcgcttgct
      181 tgctttttgg ggtgtggatc aaagaaggga tcggcggaag acacgacctc tgcggattca
      241 aacaaaccgc cggctacagt ggaagaagcg gcgaaggcac tcgatctcgc aacgttaccg
      301 ctcatggacg gcgcgaagtc cgctgagtcg cgtcacgtgg ccaatctttc ctatgttgca
      361 ccgggcgatc cgaagaaggc cttggaattc cagcggaaag cgttcggcgc gcaaggttgg
      421 aaggaattgc cgaacagctc catctccgat caatccgcca gcgcaatgtt cgcgcgcgac
      481 gggtttgtcg tctcgctctc ggtaattccc tttgaagcga gcggcgtgtc ggtgaggctg
      541 ctaaatctcg gcaacgtgaa acccggcaag ctcccggttc ctccgggcgt aaaggcggtt
      601 tatcaaggtg actccaccgc gatgtatgag accgatgcgg ccgtgcctgc gaccgcggac
      661 gccattcgga atctattcgt cgcgcagggt tgggtgcctt atggcgaggc cggagatacc
      721 gacgttttca aaaagaacgc aatcctcgcg acggtgactg tctcgtccgc acccgcgcgg
      781 ggtggcaaga ccatgattca gtattcgaat cagctaattt catctgacat ccccgcgccg
      841 caggacgtcg aagatttgcg ttacgtggat gagccgccag aactaacgtt cgcgacgagg
      901 aaccaggacg ccgtcctcga tttctatcgc aaaacgctcg ccgccgccgg ctggaaatcg
      961 acgatggata agatgatcga cgtcgatgga aagccgacca tgatctttcg caatccggcg
     1021 aaggaaatgc tgacgctttc ggtgccctac gattatggca gtggcaagct tggtgtgtcg
     1081 gttcgttttc aaagcgcggc ggaaatcgcc gagctcgatc gcagaagaaa agaggcggct
     1141 ccaaagcttc gcgccgcggc ggaagcgaaa gcagcccagg aggcaaaaga agccgccgag
     1201 ctggccgaaa agaacaagct accgaaagtc gccgtcacgc tgcccacaga tgcgaaagac
     1261 gtgaagcaga ccaaggactc gatcaagttc actgtcggca aagggaaagc caaagcggct
     1321 gttgaattct ttcggaaaca atttcgcgac gcgggttgga aagaaaagtt cgccgcgatg
     1381 gaaggcatga gcggcgcagc ctctttctca aaagaagacg gacagagtgt gaccgtgacc
     1441 tacaccgaca cgcctatctc gccgtccgag gtcagtctgt cggcgatgcg cgccgagctg
     1501 gaagcggcga aataaaggaa gaaggaagaa tggagctgac ggggtcagcg acatagaagg
     1561 taaagctgcg agggtagcag cgagcgagtg cgggcaacga gtgagtttca agtaaaaatt
     1621 aagaagttgt cgcgcaccag tcagtccatt aggacttttt ctgctgctca tgaaagtcag
     1681 acacgatcct cttagtcagc gcatcgagtt gttcgttcgg tagcccatca agatgcgcga
     1741 cgttcaggtg acgtagaagt ccgatttcgt cccggagagc acgctcggcg acagttcgta
     1801 cggcccgtac ctttacgtcg tcaactccct gcagattttt atacgcaagt ctcagttcat
     1861 agctattggt atgagcaatc gcaaacgcgt agccgtttgg gttcctgggg tccttaaccg
     1921 tcttctcggc atagacgatt agcgaactgt acccgccctt atcgacaact tcgaggtctc
     1981 gtcgagcgcg aaggtgtgtc aacagtgagt cgtggatcat ctttttggcg gcgacgtcat
     2041 cgcatattac tacgacagtg acagccttcg attcctcctc agcgaccaag tttgccgaat
     2101 acccaaacgc caaagcgacc accaaagtta tcaaagcatt catggatttc tgtgaaagca
     2161 tgacgtgtcg tttaccggcg gctcaggagt agagcaagcc gaaattgctc gatcgggtcc
     2221 ggcgactcat gccgcttctc atcgcattgc tactaagcaa ggctaaggat aaggtcacgt
     2281 ttatgaatgc tcctgcgaat ccgaacaaag cactctggga aaaaggcgat ttcacgcgca
     2341 tcgccgacac gatgcgcgaa agcggcgagg cgctcgtgca gcgacttgga ataacaaaag
     2401 gacgtaaggt gctggatctc ggttgcggcg atggcactac agcattgccc gcagcgaaac
     2461 tcggtgccga cgtgctgggc atcgatatcg cgccgaatct ggtcgaggct gggaacaggc
     2521 gcgctgcgga gcacggcctg acgaatctta agtttcaaga gggtgacgcc tcgaatctgg
     2581 agcaggtgcc ggacaagagt tttgatctcg tcgtcagcat tttcggcgca atgtttgcgc
     2641 ccaagccgtt cgaagtcgcc aaagagatgg tgcgcgtcac gcgaccgggg ggtcgcattg
     2701 tgatgggtaa ctggattcct aacgatccga cgctcgtggc gcaaattttg aagatcagct
     2761 caaactacac gccgccgccg ccggaaggtt tcgtgagccc agtgacgtgg ggcatcgaaa
     2821 gcaatgtcat cgaacgtttt accgcggca
//
LOCUS       DATDAJ010000398         4468 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2247639, whole genome shotgun sequence.
ACCESSION   DATDAJ010000398 DATDAJ010000000
VERSION     DATDAJ010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4468
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247639"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2027
                     /gene="bamA"
                     /locus_tag="VIS53_09885"
     CDS             <1..2027
                     /gene="bamA"
                     /locus_tag="VIS53_09885"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEY5768133.1"
                     /translation="GVKVIVAVQTRAIVREIEITGAERIKPKRLRKEIKVRLNQAVDE
                     QALEESREKIIETYQGHGFNDVSVEFRVDPIDEKRGTARVVFAVNEGVKGAISQIRFE
                     GNAHINQKTLRKQMKTRGRTFIYFMDKTGRLDEVQLEQDLDKVREYYQNHGFIDVEIK
                     EVRKDRTPKGPMIITIVVAEGPQYHVRKLTISGYEHSSDARVRAFLKMKEGSVYSPKQ
                     LRDDAKAVADAYGSGGYVDLVITPEGTPAGPALIDVHYLIEEGPRSFVNRVNIEGNTR
                     TKDKVLRREVLVAPGDVFNTVRVDTTKKRLDNLGYFAKVETYPEETDIPGRKDLTILV
                     QEKRTGSLSFGGGFSTIDKLVGFAELTQGNFDLFNWPSFTGGGQKFRLRLQYGTERKD
                     FILTITEPYFLDRRLSLSGQAFYTEANYLSSQYNQRNYGLLFELRKPINAYVYGTLGY
                     TLQDVDIFNVDPSASEFIQSQKGSSVESKVFTSVVLDTRDNPLLSRRGQRVSLSPFIA
                     GGFLGGDVQIYGWDLEGSQYFRLPKDTILLINGEIATVSQWGSGNQVPIYERLFLGGS
                     NNLRGYPFREVGPKDENGEPVGGQSMARATFEWTFPIIEKARGAVFYDMGFVNSDAWS
                     FGFNHMASDVGIGIRLDLPIGPLRLDYGYPVMRDGYNGGGHFNFNVGYQF"
     gene            2084..2728
                     /locus_tag="VIS53_09890"
     CDS             2084..2728
                     /locus_tag="VIS53_09890"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEY5768134.1"
                     /translation="MKKSLSILFALTLAAPIAAFAQGTAKIGTVDMQRAFKDYTKTKD
                     AEQKINEAKNAAKKEYDDRAEAYKKALDEINNLNKQLESPALSADKKTGMAKERDDKI
                     ANIKTMEREISDFRQTRERQLQEQLMRMREGIVKEITDVVMEKVKTKSLDFVLDKSGV
                     SINGVPVVLYAPENVDFTNEIIEVLNKPGRATAATRKPATNASVTPAAARATKP"
     gene            2844..3662
                     /locus_tag="VIS53_09895"
     CDS             2844..3662
                     /locus_tag="VIS53_09895"
                     /inference="COORDINATES: protein motif:HMM:NF022750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEY5768135.1"
                     /translation="MFFRFRLRITKCAITILLASCTGSFAADWQATLSKEPPGNFPEL
                     RPLRVSYRFGWSGVPAATGEVHFTKPSNDRFQLEGTGRTVNFVRALWKLDVTYRAVAN
                     SQTLAPIETQQSESYRSKKIATHLAFTNSGVTRTRTEGEGAAAKTTTRNFTLPDLFDL
                     HSAALYLRSQPLKQGSVYRLPIYAATNAYVAIVTVTGREKTSVRAGTYNAIKLDLRLK
                     RIGKHLELEPHKKFRRATIWVSDDAERLILRVDAQIFVGTVFAELQSVRFDNPK"
     gene            complement(3665..4408)
                     /locus_tag="VIS53_09900"
     CDS             complement(3665..4408)
                     /locus_tag="VIS53_09900"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY5768136.1"
                     /translation="MKITIAAVIFMGSMMLVRADQLIESVQQALKDEGFYYGEVNGDM
                     NASLTAAIRRYQIRNGLQVSGELNDETLRSLGINSSGSSRPTTKPASPTPAAGAVPGE
                     PDSDETETGSPAPPVQPFGNPPQDQQVFPSTPMGPAGSPGPVFADTPFQNAPPGIQRN
                     VIVSAQIALAQYGLYREQIDGIYGPAMEFSLRAYQARARLQVTGRLDLETLVALRLLP
                     GPRQQFHNPYRQRMRPMPGPPIRGQWEPD"
BASE COUNT         1110 a         1163 c         1236 g          959 t
ORIGIN      
        1 acggtgtgaa ggtgatcgtt gccgttcaaa cgcgggcaat cgtacgggag atcgaaatca
       61 ccggcgccga acggatcaaa ccgaaaagac tgcgcaaaga aatcaaagtg cggcttaacc
      121 aagccgttga cgagcaggca ctcgaggaat cgcgcgaaaa aatcatcgaa acttatcagg
      181 ggcacggatt caacgacgtc agcgttgaat tccgcgtgga tccaatcgac gagaaacgcg
      241 gcacagcgcg cgtcgttttc gcggtgaacg agggcgtcaa aggcgcgata agccagattc
      301 ggttcgaggg caacgcgcac attaaccaaa agacattgcg caaacagatg aaaacccgtg
      361 gcagaacgtt catctatttc atggataaga caggtcggct tgatgaagtt cagttggaac
      421 aggacttaga caaggtccga gagtactacc aaaaccacgg cttcatcgac gtggaaataa
      481 aggaagtgcg caaagatcgc actccgaagg gcccgatgat catcacgatc gtggttgcgg
      541 aaggtccaca atatcacgtc cgcaaattga cgatttccgg ttacgagcat agcagcgatg
      601 caagagttcg cgccttctta aaaatgaaag agggcagcgt ctattcgccg aaacagctcc
      661 gcgacgacgc caaggccgtt gccgacgcat acggcagcgg aggctacgtc gatctcgtga
      721 ttacacccga gggcacgccc gccgggcccg cgctcatcga cgtgcattac cttatcgaag
      781 agggcccccg ctcgtttgtg aatcgggtga atattgaggg gaatacgcgc acaaaggaca
      841 aggttctccg ccgcgaagtg ctcgtcgccc cgggagatgt tttcaacacg gtccgtgtag
      901 acaccacgaa gaaacgtctg gataacctgg gttactttgc aaaggtcgag acttacccgg
      961 aagaaacaga tataccgggg cggaaagatc taacgattct cgtccaggaa aagcggacgg
     1021 gttcactcag ttttggaggt ggctttagca cgatcgataa actggtaggg tttgcggaac
     1081 tcacccaagg caatttcgat ctgttcaact ggccttcgtt caccggcggg gggcaaaaat
     1141 tccggttacg tcttcagtat ggaaccgagc gaaaggattt tattctgacg atcactgaac
     1201 cttacttcct cgatcgacgt ctttcgctga gtggccaggc cttttacact gaggcgaatt
     1261 acttgagctc ccaatacaat cagcgcaatt acgggttgtt attcgagctg cgcaagccaa
     1321 tcaacgcgta cgtgtacggc accctgggat atacgttgca ggacgtcgat atctttaacg
     1381 tggatcctag cgcctctgag ttcatccagt cgcaaaaggg atcgtcagtg gaaagtaaag
     1441 tttttaccag tgtggtcctt gatacgcgcg acaatccctt gctttcccgc cgcggacaac
     1501 gtgttagttt gtcccccttt atcgccggcg gttttctggg aggcgatgtc cagatttacg
     1561 ggtgggatct ggagggatcg caatatttcc gtttacccaa ggatacaatc ctgctcatca
     1621 acggcgaaat cgcgacggta agccaatggg gtagcggcaa ccaggtgcca atttacgaac
     1681 ggctcttcct tggcggttcg aacaatctcc gtggctaccc gttccgggaa gtgggcccca
     1741 aggatgaaaa cggcgagcct gttggtggtc aatcaatggc gcgcgccacg ttcgaatgga
     1801 ctttcccgat tattgaaaaa gcgcggggcg cagtttttta tgacatgggt ttcgtgaata
     1861 gcgacgcgtg gtctttcggc ttcaatcata tggcttcgga tgtcggaatc ggaattcgac
     1921 ttgatttgcc gatcggtcca ctacgcctcg attacggata cccggtgatg cgtgacgggt
     1981 acaacggcgg cggccatttc aactttaacg tgggctatca attttgaacg aatatatgtg
     2041 gttgcagtct aacgcgattc gtccaaccat atcctctgtt tctatgaaaa agtctctgtc
     2101 aatactcttt gcgctgacgc tggctgctcc gattgcggcc ttcgcgcagg gcacagccaa
     2161 aattggaacg gtcgatatgc agcgcgcgtt caaggattac actaaaacca aggacgccga
     2221 gcaaaaaatc aacgaggcca agaacgccgc caaaaaggaa tacgatgacc gggcggaagc
     2281 ttacaaaaaa gcgctcgatg aaatcaacaa tctcaacaag cagcttgagt ctccggcatt
     2341 gagtgcggat aaaaagacgg gcatggccaa ggagcgcgat gacaaaatcg caaatatcaa
     2401 aaccatggag cgcgagatca gcgactttcg ccagacgcgg gagcgtcagt tgcaggagca
     2461 attgatgcga atgcgcgagg gaatcgtgaa ggaaattacc gacgtcgtca tggagaaagt
     2521 caaaaccaag agcctcgatt ttgtgttgga taaatcgggc gtcagcatca atggggttcc
     2581 tgtcgtgctg tacgcgccgg agaacgttga tttcacaaac gaaatcatcg aagtgctaaa
     2641 caaacctggt cgcgctacag ctgcgaccag gaagcctgca acaaacgcgt ccgtcacgcc
     2701 ggcagcagca agagctacga agccctgagg ttcgcctcga atttcaaaga tacacgcggg
     2761 ctaaactcgc gtgtattttt ttgtacggat gaaatcgcct gctggcacgg cgatggtcgt
     2821 gagcagctgc gaacctcaaa agaatgtttt ttcgattccg actccgaata acaaaatgcg
     2881 cgatcacgat cctgctcgcg tcttgcactg gttcattcgc tgcggattgg caggcgacac
     2941 tcagcaaaga gccgcctggg aattttccag agttgcgccc tctgcgcgtg tcctatcgct
     3001 tcgggtggtc tggagtgcct gcggccaccg gcgaggttca ctttaccaag ccatcgaacg
     3061 acaggtttca actcgaaggt acaggtcgaa ccgttaattt cgtccgggcc ttgtggaaat
     3121 tggatgtcac gtatcgcgcc gttgcgaact cccaaacatt ggctccgatt gaaacgcagc
     3181 aaagcgagag ctatcgatca aaaaaaatcg ccacccatct cgctttcact aacagcggag
     3241 tgactcgaac acgaaccgaa ggcgagggcg ccgccgccaa gacaaccacg cggaacttta
     3301 ccttgcctga cttgttcgat ttgcattccg cggcgcttta cctgcgcagt cagccgctca
     3361 aacaagggag cgtgtatcgt ctgccgattt atgcggcgac aaatgcttac gtggccattg
     3421 tgactgtaac cggacgagaa aaaacctccg tgcgcgccgg cacttacaac gcgatcaaac
     3481 ttgatctgcg actcaaacgc attgggaaac atctcgaatt ggagccgcac aaaaaatttc
     3541 gtcgtgccac aatctgggtg tcagacgatg ccgagcggct tatccttcgc gtcgacgcac
     3601 agattttcgt gggcacagtt ttcgcggaac tgcagtcggt gcgttttgat aatccaaaat
     3661 aagactagtc gggttcccat tgaccgcgaa tcggcggccc aggcatcgga cgcatgcgct
     3721 ggcggtaggg attatgaaac tgctgacgcg ggccgggtaa taagcgcagc gccacgaggg
     3781 tttccagatc cagccgacca gtcacctgca gtctcgctcg cgcttggtag gcacgcaggg
     3841 agaattccat cgcgggtccg tagattccgt caatttgctc acgatacaat ccatactgag
     3901 cgagggcgat ctgcgccgag acaatcacat tgcgttgtat gccgggagga gcattctgaa
     3961 atggcgtgtc ggcaaaaact ggccccggtg aaccggccgg acccatggga gtcgagggaa
     4021 aaacctgctg gtcttgtggc gggttaccga aaggctgaac cggaggggcg ggacttccgg
     4081 tttcagtttc gtcggaatcg ggctcgccag gcacagcccc agccgcagga gtcggtgatg
     4141 caggtttcgt cgttgggcgc gacgacccgg aagaattaat tccgagcgat cgcagggtct
     4201 catcatttag ctcgccgcta acctgcagac cgttgcgaat ttgataacgg cgaatcgccg
     4261 cagtgagact cgcattcatg tcgccgttga cttcaccgta gtagaaacct tcatccttga
     4321 gagcctgttg cacgctttca atgagttggt ccgcccgcac cagcatcatc gatcccatga
     4381 agatcaccgc agcaattgtg attttcatgg tcattcgacg acgccgtttt ttgcctattc
     4441 agcgctcttc tggcctgtgg ctgccaat
//
LOCUS       DATDAJ010000399         2377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2247787, whole genome shotgun sequence.
ACCESSION   DATDAJ010000399 DATDAJ010000000
VERSION     DATDAJ010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247787"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..957
                     /locus_tag="VIS53_09905"
     CDS             <1..957
                     /locus_tag="VIS53_09905"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5768137.1"
                     /translation="LSSEQIERMIGQLTGLTERMIGLEAQTRGHSRAKKEAALSEIRR
                     IEQTAGLTANQLKEQTRRIHEGEARVKAARKEFTEANLRLVVSIAKKYINRGLSFLDL
                     VQEGNLGLMRAVEKFDYRLGFRFSTYATWWIRQGITRGLIDTGHTIRVPVHRVESRNK
                     VIQTAREMQRKLGRDPRPEELAKEMRVSVAELLKLVQTQGEPVSLQTPIWEDGDELGD
                     FVEDRIRPQPESQALEGLFQSEVRKALAVLTPRQETVLRKRFGIEEKRDYTLEELGDM
                     FAVTRERIRQIEQKSLQILRNPTRRKPQIPATKEIAGDPSLN"
     gene            1070..2191
                     /locus_tag="VIS53_09910"
     CDS             1070..2191
                     /locus_tag="VIS53_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768138.1"
                     /translation="MSTELQPTPISTATIQKGLCYAIFAYDAARSIDLAKAERRTDEE
                     TERPTIAHKRRTPSYFEYQPPPLRMNQDTKPISVGKFTTRASSEVMIYDFGAVAVIYS
                     LPIEGPFEDLLTLSEELYDNEALLADSRLRVEGLLKTIGDAAVQPHHSSVVEDYVIFH
                     VENLNEPLDANLFCSKQARQIAQILRAERQTLSDQEVDDALSARVSYGVEDVTVVDWN
                     AALLIDREGEDVRAVLEFANVELLEMRYVDQKLDHALDQAYATLPRQSWGLQRAFASY
                     SADLRSLAELQVDNATLFEGVNNTLKLLGDQYLARVYRIANRRFHLDDWDSSILRKLQ
                     TLESIYEKISGQATNQRMELLEWVIIFLIAFSIALEFIH"
BASE COUNT          577 a          655 c          642 g          503 t
ORIGIN      
        1 ctttcttcgg aacaaatcga acgaatgatc gggcaattga ccggactgac cgagcggatg
       61 atcggactcg aagcacaaac gcgaggccat tcgcgggcca agaaagaagc cgcgctatcc
      121 gagatccggc ggatcgaaca aaccgccgga ctcacagcca atcaactgaa ggaacaaact
      181 cggcgcattc acgaaggcga agcccgtgtc aaagcggcac ggaaagaatt caccgaggcc
      241 aatttgcgtc tggtcgtcag catcgcgaag aaatatatca accgtggttt gagttttctc
      301 gatctcgttc aggaaggcaa tttggggtta atgcgggcgg tggaaaagtt cgattaccga
      361 cttggttttc gcttctctac ctatgcgact tggtggatcc gacaaggcat tacccgcggg
      421 ctgatcgata ccggtcatac aattcgcgtc ccggtgcatc gtgttgagtc gcgaaacaag
      481 gtgatccaaa cggcgcgcga gatgcaacgt aaattgggcc gcgatccacg ccccgaggaa
      541 ctcgccaaag aaatgcgcgt gtccgttgcc gaactgctca agctggtgca aacccaaggc
      601 gagcctgttt cattgcaaac tccgatctgg gaagacggtg acgagctcgg cgactttgtc
      661 gaagatcgca tccgtcccca gccagagagt caggccttgg aagggctatt tcagtccgag
      721 gtgcgaaaag ctttagcggt tctgacgccg cgacaggaga ccgtcttgcg caagcgtttc
      781 ggcatcgagg aaaaacgcga ttacactctc gaagagctgg gcgacatgtt tgcggtcacg
      841 cgcgagcgca tccgtcagat cgaacagaaa tcgttgcaaa tcttacgcaa cccgacgcga
      901 cgaaagccgc aaatcccggc taccaaagaa atcgccggcg atccgtcgtt gaactaactg
      961 catcccatcg atttgtattt gccaaggggc gcgataagcc gcgccccttg gcatttttaa
     1021 tcctgcgaac ttccttcttg aggtttgccg gtgctacatt gaaatgagaa tgagcaccga
     1081 acttcagccg acgccaatct cgacggcaac cattcaaaaa gggttatgct acgcaatctt
     1141 cgcgtacgat gcggcgcgtt ctatcgatct cgccaaagcc gaacggcgca cagatgagga
     1201 aaccgagcgg ccgaccatcg cgcataagag acgcacgccg agctatttcg agtatcaacc
     1261 accgcctttg agaatgaacc aggacaccaa accgattagc gtcggcaaat ttaccacccg
     1321 cgccagctcg gaggtaatga tttacgattt cggcgcggtg gcggttattt attcgctgcc
     1381 gattgaaggt ccgtttgagg atttgctcac tctcagcgag gagctttacg acaatgaagc
     1441 gctgctcgca gattcacggt tgcgagtcga agggctcttg aaaaccatcg gcgatgctgc
     1501 cgtgcaaccg caccactctt cggtcgtcga ggactacgtc attttccatg tcgaaaatct
     1561 taacgaaccg ttggacgcga atcttttttg ctcgaagcag gcccgtcaaa tcgcccagat
     1621 tcttcgcgca gagcgtcaaa cgctttccga tcaggaggtt gacgacgcgc tctcggcgcg
     1681 tgtttcctat ggcgtcgagg atgtcacggt ggtcgattgg aacgccgcgc tgctcatcga
     1741 ccgcgaaggc gaagatgtcc gcgcggtcct cgaattcgcc aatgtggagt tgctggagat
     1801 gcgctacgtc gaccagaagc tcgatcatgc cctggatcaa gcttacgcca cgctgccacg
     1861 gcaatcgtgg ggcctgcagc gcgcatttgc ctcctatagc gctgatctgc gcagcttggc
     1921 cgagctgcaa gtcgacaacg ccactttatt cgagggcgtc aataacacgc taaaactgct
     1981 tggcgatcag tatctggcgc gggtctatcg catcgccaat cgccggtttc acctcgacga
     2041 ctgggactcg agcattctgc gcaaattaca gacgctcgaa agtatttacg aaaaaatctc
     2101 cggtcaggcg acgaaccagc gcatggaatt gttggaatgg gtgatcatct ttttaatcgc
     2161 gttctcaatc gccttagaat tcatccatta gaagattgca cggattctga tttacgatta
     2221 acgccgcgat ggcgaagctg ccgagcttcg attgtaactc tccaacctca gcgcccaggg
     2281 ttcggcgtaa cttagagtcg cagatctagc ttaggaatag ccaagagcca ttcgacgaga
     2341 cgatcgccgc cgaatctact cgcatataaa ccgagca
//
LOCUS       DATDAJ010000400         2566 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2269224, whole genome shotgun sequence.
ACCESSION   DATDAJ010000400 DATDAJ010000000
VERSION     DATDAJ010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2566
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2269224"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VIS53_09915"
     CDS             <1..266
                     /locus_tag="VIS53_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768139.1"
                     /translation="SRDSSFRTFYFEPKKSTNKVRDDAVHFVVGFEHAPRETASGSPN
                     ATWKVTRWDLVDLSRFTVKLKAEFQGSNRDMYRPEAIVASSAK"
     gene            371..1588
                     /locus_tag="VIS53_09920"
     CDS             371..1588
                     /locus_tag="VIS53_09920"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: protein motif:HMM:NF006803.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HEY5768140.1"
                     /translation="MISRSKETFQFDAIDDVLSDIAKGRMVIVTDDADRENEGDLVMA
                     AEKVTPEAVNFMATHGRGLICVPISNERADQLGLQRMVAQNREKHNTDFTVSVDAARG
                     VTTGISAYDRATTILALANPKSAPEDLNQPGHIFPLRAKDGGVLRRAGHTEAAVDLAR
                     MAGLQAAGVLCEILHDDGTMARLPELMEFRNKHGLRICTIQSLIAFRRKSEKLVELEQ
                     IVKMPTDYGDFDLHLYRSKVDGQHHLALVKGRIDKNKPTLVRVHCQCRTGDVFASRRC
                     DCGNQLHAALRQIEEEGQGVLVYMRQEGRGIGLAAKIHAYKLQEEGLDTVEANAKLGY
                     ATDLRDYGLGAQILFDLGVRQFRFLTNNPKKVVGLEGYGLEMIEQVPIRAEANPHNEK
                     YLETKKTKLGHLL"
     gene            1622..2137
                     /gene="ribH"
                     /locus_tag="VIS53_09925"
     CDS             1622..2137
                     /gene="ribH"
                     /locus_tag="VIS53_09925"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: protein motif:HMM:NF013081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEY5768141.1"
                     /translation="MSKSTPSRPPVAKAVRTFHIVASRFNPQYVDGLIDHATQELRAL
                     APHNTILIHRVPGSFEIPVVARELAIQNKADAIIACGVILQGETNHAQNLSRSVTDAL
                     QRIAIEHGVPVINAVLSFDNENQARARCLENKINRGTEAARAAVEIANVLSEVRSKQG
                     AAVSKSPRDNG"
     gene            2130..>2566
                     /gene="nusB"
                     /locus_tag="VIS53_09930"
     CDS             2130..>2566
                     /gene="nusB"
                     /locus_tag="VIS53_09930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY5768142.1"
                     /translation="MGKRRRAREAAVQYHFWRDLQRGEGPDKIDEFWEFCPAPERVRE
                     FAQPLIEGMVAHLPDIDERIRRYCENYEFRRISAVDRNVLRLAIYEMLYRDDIPPVVS
                     INEAIELAKAYGGADSGRFVNGILDRIRKDLDRPAREPVIKRDS"
BASE COUNT          614 a          669 c          764 g          519 t
ORIGIN      
        1 gaagtcgcga cagcagtttc cgcacatttt atttcgagcc gaagaagtcg acgaataaag
       61 tgcgcgatga cgcggtgcac tttgtcgttg gatttgagca tgcgccgcgt gaaactgcat
      121 cgggttctcc gaacgcgacg tggaaagtca cgcgatggga tcttgtggat ctttcgcggt
      181 ttaccgtcaa actgaaggcc gaatttcagg gcagcaatcg cgatatgtac cggccggagg
      241 caattgtcgc ttccagcgcg aagtgacatg cgcgctctga tgcttccgat ggttgaaatg
      301 tgatcgatca ccagcaggag cacgagcagg agttgctcgt tcaactgcca ggacgtaatg
      361 gtattgttca atgatctcaa ggtcgaagga aacatttcag ttcgacgcga ttgacgatgt
      421 tcttagcgac atcgctaaag ggcgcatggt gatcgtgacc gacgatgcag atcgcgagaa
      481 cgaaggcgat ctggtcatgg cggcggaaaa agtgacgcct gaagcggtca atttcatggc
      541 gacgcacggc cggggcttga tttgcgtccc catttccaat gagcgcgccg accagctcgg
      601 cttgcaacgc atggtggcgc aaaaccggga aaagcataac accgacttca ccgtttcagt
      661 ggacgcggcg cgaggtgtga cgaccggcat aagcgcctat gatcgcgcga cgacaatact
      721 ggccctcgcc aatccgaaat cagcgccgga agatttgaac caaccgggtc acatatttcc
      781 actacgcgca aaagacggcg gcgtgctgcg acgcgccggt cacaccgagg cggccgtgga
      841 tctggcaaga atggcaggcc tgcaagcggc gggcgtgctc tgtgagattt tgcacgacga
      901 cggcacgatg gcgcggcttc cggagctgat ggagttccgc aacaaacacg ggctgcgcat
      961 ttgcacgatc cagagcttga ttgcctttcg acgcaagagc gagaaactcg tggagctgga
     1021 gcaaatcgta aaaatgccca ccgactacgg cgatttcgat ttgcatttgt atcgctcgaa
     1081 ggtcgatggg cagcatcatc tcgcgctcgt gaaaggtcgg atcgacaaga acaaaccgac
     1141 gctggtgcgg gtgcactgtc agtgtcgcac cggtgacgtt ttcgcgtcgc gccggtgcga
     1201 ttgcggaaat caattgcacg cggcgctgcg gcaaatcgag gaggaaggcc agggcgttct
     1261 ggtttacatg cgacaagagg gccgcggtat tggattggcg gcaaaaatcc acgcttacaa
     1321 gttgcaggag gaaggactcg acaccgtaga ggccaacgcg aaactcggat acgcaactga
     1381 cctgcgcgat tacgggctcg gcgcacagat tcttttcgat ctcggcgtca gacagttccg
     1441 gttcctcacc aataacccga aaaaagttgt cggcctggag ggttacggtt tggaaatgat
     1501 tgagcaggtg ccgatccggg ctgaagccaa tccgcacaac gagaaatatc tcgaaacaaa
     1561 aaagacgaag cttgggcact tgctgtgatt gcggattgcc gattgcagat ctgaacaacc
     1621 gatgtcgaaa tcgacaccgt ctcgtccgcc agtcgccaaa gccgtccgta cgttccacat
     1681 cgttgcgagt cggttcaatc cgcaatacgt ggatgggctt atcgatcacg cgacgcagga
     1741 gctgcgcgcc ctcgcgccac acaatacgat tttgatccat cgcgtccctg gctcgttcga
     1801 gattcccgtg gtcgcccgcg aacttgcgat ccaaaacaaa gccgatgcga tcatcgcgtg
     1861 tggggtgatt ctgcaaggcg aaaccaatca cgcacaaaac ctgagtcgct cggttactga
     1921 tgccttacag cgcatcgcca tagagcacgg cgtaccggta atcaacgcag tactcagttt
     1981 tgataacgaa aaccaggccc gcgcgcgttg tcttgaaaat aaaatcaacc gcggaactga
     2041 agccgcgcgc gcagcggtgg aaatcgcgaa cgttttgtcg gaagttcgta gcaaacaagg
     2101 agcggcggtt tccaaatcgc cgagggataa tgggtaaacg acggcgcgct agagaagctg
     2161 cggttcaata tcatttctgg cgtgatcttc agcgcggtga aggaccggac aagatcgatg
     2221 agttctggga gttttgccca gcgccagagc gggtgcgcga attcgcacag ccattaatcg
     2281 aaggtatggt ggcgcatttg ccggatatcg atgagcgtat ccgccgttac tgcgaaaact
     2341 acgagtttcg ccggatttca gcggtggacc gcaatgttct gcggctggcg atttatgaaa
     2401 tgctttaccg cgacgacatt ccgccggtcg tctccatcaa cgaggcgatc gaactggcga
     2461 aggcatacgg cggcgccgat tcaggacgat ttgtgaacgg aatccttgat cgtatccgaa
     2521 aagatttgga tcgccccgcg cgtgagccgg taatcaaacg ggattc
//
LOCUS       DATDAJ010000401         2719 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2275716, whole genome shotgun sequence.
ACCESSION   DATDAJ010000401 DATDAJ010000000
VERSION     DATDAJ010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2275716"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(738..1259)
                     /locus_tag="VIS53_09935"
     CDS             complement(738..1259)
                     /locus_tag="VIS53_09935"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEY5768143.1"
                     /translation="MKTKNIGFWVIIALAVSMLAAPAVYSQHTERFSARLSGAEEVPP
                     INTAGSGDFEMSIQQGVITFELNFSDLSSPLAVAHLHFGQRNVAGGVMIFLCGGGGQP
                     ACPATTEGTITGTITAANVTGPAAQGIAAGDLDSALAAVRDRLSYANMHTANFGGGEI
                     RGQVRRGRGHGHH"
     gene            complement(1437..1970)
                     /gene="tadA"
                     /locus_tag="VIS53_09940"
     CDS             complement(1437..1970)
                     /gene="tadA"
                     /locus_tag="VIS53_09940"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HEY5768144.1"
                     /translation="MWLVWLDGPRDRGYTLKMLEPLPDEYFMREALRQGQKAYAADEV
                     PVGAVVMRDGKIIARAHNQVELLKDATAHAEMLALTQAEAAVGDWRLMDCDLYVTKEP
                     CAMCAGAVVHTRIRRVIFGCADPAAGAAGSVMNLLQMPTFNHRCEITSGVLQKECAAL
                     LQDFFRKRRDEQGSTTF"
     gene            2050..>2719
                     /locus_tag="VIS53_09945"
     CDS             2050..>2719
                     /locus_tag="VIS53_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006977976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY5768145.1"
                     /translation="MHDNIESHLVEKRVFKPAPHFSSKARITSLAKYRRMYRESIRQP
                     ARFWTREAKELVWRAPWKKVVEWKPPFAKWFVGGKLNVSENCLDRHLAGARRNKAAII
                     WEGEPGDKRTRTYQQLHREVCRFANVLKRNNIKKGDRVIIYLPNIPEAAIAMLACARI
                     GAVHSVVFGGFSADSIRDRINDSGAIALVTADGSYRRGGIVPLKKNVDDALRDGISLQ
                     RVIVF"
BASE COUNT          615 a          763 c          752 g          589 t
ORIGIN      
        1 aaatttagct caatctacaa gtccaatttc ttcggatttt tgtctgcgag aggaaccgcg
       61 acatcgttcg tatccgaatc aaataaaaag gggaaaggcg cgattttggg atgcgccgtg
      121 agctccgtgc caagagtttt cagtccctcc gcaaacacaa acaacgggga aattcataaa
      181 taggaggata aatgaaaaaa ctgcttttac ttccattggt agcaatcgga ctggctttgg
      241 ttccggcaaa acaagctgac gctcaggttt caatcggggt cggaggagtc gggatcggct
      301 tcggttatcc gggatatcgt tacggctacg gatatccggg gtacgtatat tacccacgta
      361 gctattacag ctattacgga ggttctccat attaccgcac ttactacggt cgacccacat
      421 actactacag gggtcatcga ggtcacaaat accacaagaa atattactac cgctattagc
      481 acaccggtta gtgtgaggcc taaggagctg gcttggagca attccaagcc agcttttctt
      541 ttcccctgaa gccgactcat cctccgtaaa agcgtgacgc tctcacgggg caacgggcga
      601 agtgcgcgaa gcacttgccc gattccgcaa ttactcgcca gcgttaccgt gccccccgcc
      661 ccgctgaacg ttgccgcgaa tctcacccgc ggcaaaattc gtcgtgcgca tgcgacgcgt
      721 cggagttact tcattggtca atgatgaccg tgtcccctgc cccgacggac ttggccgcga
      781 atctctcccc cgccgaaatt cgctgtgtgc atgttcgcat aggatagacg gtcgcgcacg
      841 gccgccaagg ccgagtcgag gtcgcctgcc gcaatgccct gggctgcggg tcctgtaaca
      901 ttggccgctg tgatggtgcc ggtgatggtg ccttcagtgg tcgcagggca ggccggttgg
      961 cccccgccgc cgcacaggaa tatcatcacg ccacctgcca cgttgcgctg tccgaagtgc
     1021 aagtgggcca cagcaagcgg tgatgacagg tccgagaagt ttaactcgaa ggtgatcacg
     1081 ccctgctgga tcgacatctc gaagtcgcct gagccggcgg tattaattgg aggtacctcc
     1141 tccgctccgc tgagccttgc ggaaaaacgc tccgtatgct gcgagtaaac tgccggtgcg
     1201 gcgagcatac tcacagccag tgcgattatt acccaaaaac caatgttttt tgttttcata
     1261 atcatatttc tcccgtttgg acgctaggaa cgcgattgtc gttatgtcaa tcagaatcac
     1321 ccttagcagc gaatcgaaaa gtaacgcgtt tgttactttc cgacgcaagt tcgttatgac
     1381 gtcaccgtgg cgaggtgcgg aaaattagcg tgcgtgctgt gacaccccag cggagactag
     1441 aaagtcgtcg agccttgctc gtcgcggcgt ttgcgaaaaa aatcctgcaa gagcgcagca
     1501 cattcttttt gcaaaacacc cgatgtaatc tcgcaccggt gattaaaggt cggcatctgc
     1561 aggaggttca tcacgctgcc ggcggctccg gcagccggat ctgcacaacc gaagattacg
     1621 cggcggattc gcgtgtgaac gaccgcgcct gcgcacatag cgcacggttc tttcgtcaca
     1681 taaagatcgc aatccatcag acgccaatcg ccgacggccg cttcagcttg cgttaacgca
     1741 agcatttcgg catgagcggt cgcgtccttg agtaactcga cctggttatg cgcgcgcgcg
     1801 atgattttgc catcgcgcat aaccaccgcg cccaccggca cttcgtccgc tgcgtacgcc
     1861 ttctgcccct gtcgcaatgc ttcgcgcatg aaatattcgt cgggcagcgg ttcgagcatc
     1921 tttaacgtgt agccacggtc tcgtgggccg tccaaccaaa ccaaccacat ttgaccggac
     1981 acaggccggt ggctacagag gaagcgcgcg tttgccctga aaagttcttg cgcatattag
     2041 ggactgctca tgcacgacaa cattgaatcg catctggtcg aaaaacgcgt ttttaagccg
     2101 gcaccgcatt tcagcagtaa agcgcggatc acaagcctgg ccaaatatcg gcgaatgtat
     2161 cgagaatcga tccggcagcc tgccaggttc tggacgcgcg aagcgaagga gctggtctgg
     2221 cgcgcgccgt ggaagaaggt tgtcgaatgg aagccgccgt tcgcgaaatg gttcgtgggc
     2281 ggcaaactca acgtttcgga aaattgtctg gaccggcatc tcgcaggggc gcgtcggaac
     2341 aaggccgcaa taatttggga aggcgaaccc ggcgacaagc gaacgcggac ctatcagcag
     2401 ttgcatcgcg aagtctgccg cttcgcgaat gtgttgaaac ggaacaacat caaaaaaggc
     2461 gatcgcgtga tcatttatct gccgaacatc cccgaggcgg cgattgcgat gctggcctgc
     2521 gctcgaattg gcgcggtgca ctcggtggtg ttcggcggat tcagcgccga cagcatccgc
     2581 gaccggatca acgacagcgg cgcgattgcg cttgtcactg ccgatggctc atatcgtcgc
     2641 ggcggaatcg tgccgctaaa gaaaaacgtg gatgacgctc tccgcgatgg catctctttg
     2701 cagcgcgtaa tcgtttttc
//
LOCUS       DATDAJ010000402         8718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2280676, whole genome shotgun sequence.
ACCESSION   DATDAJ010000402 DATDAJ010000000
VERSION     DATDAJ010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 8718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8718
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2280676"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..569
                     /locus_tag="VIS53_09950"
     CDS             123..569
                     /locus_tag="VIS53_09950"
                     /inference="COORDINATES: protein motif:HMM:NF040413.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6428 family protein"
                     /protein_id="HEY5768146.1"
                     /translation="MTTHDFISRLREAPAKQLVFANSDGTRINGGYHLTELKAASFDT
                     VDCGAQKNQWNETIVQLWVPENEENGEFMTAAKFLSIYDKVARLIPLDPTAEIRFEYG
                     DENFPPSNYHVEMISENEAELRVQLRLPQATCKARDRREAGAACCG"
     gene            663..1679
                     /gene="pstS"
                     /locus_tag="VIS53_09955"
     CDS             663..1679
                     /gene="pstS"
                     /locus_tag="VIS53_09955"
                     /inference="COORDINATES: protein motif:HMM:NF008171.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HEY5768147.1"
                     /translation="MMKFRRRIFLGLAIALGLSASASAQMTINGAGATFPYPIYSKWF
                     DEYAKVDPSARFNYQSIGSGGGQKQILAQTVDFGASDGPMSDENLAKAPGKLLHIPTV
                     AGADVVAYNLPGNPALKFDADTIAGIFLGNIKKWNDPKITALNAGVSLPDKDIVVVHR
                     SDGSGTTYIWTDYLSKISPEWKSKVGTNTSVNWPTGIGGKGNEGVAGQIKQTPGALGY
                     VDLIYAIQNKMPYADIKNSAGSFVKPTLESITAAMATAQIPDDFRFSITNAPGENAYP
                     IAGATWLLVYQQQKDATKGKKLVEFLKWAQKEGEKMAKDLDYAPLPEDLQQRVLKRID
                     EIKM"
     gene            1707..2693
                     /gene="pstC"
                     /locus_tag="VIS53_09960"
     CDS             1707..2693
                     /gene="pstC"
                     /locus_tag="VIS53_09960"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEY5768148.1"
                     /translation="MSAVTVEEADAIHPAQARMSPPSRFADKAFYWLTLSMAFAVVLL
                     VILIGWQLGQGSWQAIQKFRFHFVATSTWDPVAEQYGALPFIYGTAISSLIALLIAVP
                     LSIATAVYLTELAPLWIRQPIVSLIEMLAAIPSVILGLWGIFVMIPWLRDYPFPFLQR
                     ILGWTPFFSGPIYGPCMLAGGIIVAIMVLPIITSVSREILRSVPDLQREAAYALGATR
                     WEVTRIAVLSYARKGLFGAVILGLGRALGETMAVTMVIGNTPQIAASLFKPGYTLASV
                     IANEFTEATTDMYLQALFEIGLVLFGVTILINLLAQLLLKTITAGAAPDRVQ"
     gene            2696..3553
                     /gene="pstA"
                     /locus_tag="VIS53_09965"
     CDS             2696..3553
                     /gene="pstA"
                     /locus_tag="VIS53_09965"
                     /inference="COORDINATES: protein motif:HMM:TIGR00974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEY5768149.1"
                     /translation="MEIQRKDHHSWRKLKSTLISGLTFCSAVLVIAPLGLVFFHVLMS
                     GIGAVNLEFFTNLPKPVGVPGGGMANAIVGTLELLALASVIGIPVGVLGGIFLAEYGT
                     ARVNAVLRFIADVLNGVPSIIWGVVVYGLIVLRFKSFSGYAGGLALGLIMIPLILRTT
                     EEVILLVPAGYREAALALGIARWKTIIQIVVKTASRGIITGILLALARVGGETAPLLF
                     TAFGNHFWNRDLNEPIAALPLQIFTYAISPYDDWHRQAWAGALVLVTGVFCVNVLVRI
                     VTRVRTASA"
     gene            3563..4408
                     /gene="pstB"
                     /locus_tag="VIS53_09970"
     CDS             3563..4408
                     /gene="pstB"
                     /locus_tag="VIS53_09970"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017979518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEY5768150.1"
                     /translation="MIAAPMSRPEVVEPRDPGAAVLLDTEGEALPLAMEAKNVSMWYG
                     SKRAIDNVSLDMPAKAVTAIIGPSGCGKSTFIRALNRMHELVPHARIEGSVFLHGQNL
                     YASSMDPAVVRRRVGMVFQKSNPFPTMSIGENAIVGLRLNGVSDRRFLNERLEQSLRM
                     AALWDEVKDDLHKSGTSLSGGQQQRLCIARALAVEPEVLLMDEPCSALDPIATAKIEE
                     LIQGLKTQYTIVIVTHNMQQAGRVSDFTAFFYMGRLIEVGSTTKIFTNPNEKQTEDYI
                     TGRFG"
     gene            4470..5156
                     /gene="phoU"
                     /locus_tag="VIS53_09975"
     CDS             4470..5156
                     /gene="phoU"
                     /locus_tag="VIS53_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEY5768151.1"
                     /translation="MVIPKHILGTFDEALTSLRNDLLMMAGLAERSLDRALKGLLQRN
                     DDLCTHAIADDEEIDQLEKQIDKDGFEILLRFQPVASDLRRVISAIKLSPNIERVGDQ
                     ATNIAKRARKLNRHPPLPEVQMIVPIQANAMSMFKDAINAYVRENIELAHSVCSRDKQ
                     LDDMNRDANTKLTARMMEDSEQLRGYFNLILISRALERVGDHATNIAEDAVYTAVAED
                     IRHKNVAASV"
     gene            5200..7452
                     /gene="ppk1"
                     /locus_tag="VIS53_09980"
     CDS             5200..7452
                     /gene="ppk1"
                     /locus_tag="VIS53_09980"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: protein motif:HMM:NF003921.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEY5768152.1"
                     /translation="MPQAQAIPRTEEKSDAAAVPQVVQTLHDRFGDPKNFINRELSWL
                     AFNQRVLEEAQDPTQPLIERVKFLTIFSSNLDEFFEIRVAGIKQQIESETSDVGPDGL
                     SPTELFDRIQKTVRELVATQYALWKNEFLPELAKNGIYVREIADLSTKRSAWANRYFQ
                     QEVFPMLTPLAVDASHPFPHLLNRSHNLLVRAKTRRRGEPLHAIVQVPRVVPRLILMP
                     RGAGANEPWEYIYLASLIKQHIGELFPGLILDGVHAFRVTRNSDLYIDDEEAENLLRT
                     IEHELRRSSRGNAVRLEVEADCPKDFLELLLEFFSLSEADAYKLDGPLTMTHLAPLVA
                     NDAFAKLKDRPFQPARDPALPPHADFFEVLRRQDVLLHHPYDSFDEVVELVETAAKDP
                     QVLAIKMTLYRTSGDSPIVEALIDAANAGKQVTAIVELRARFDEASNIQWARRLEEVG
                     AHVIYGVVGLKTHCKALLIVRRDADELRRYVHLGTGNYHSRTARIYTDFSLLTSERQL
                     SEEVATVFNTLTGLAGYPGLKKLMVSPFDMHSRFVKLIERERDNALAGKPARIVAKMN
                     ALVDQEIIEKLYEASCADVTIDLVVRGICCLRPKVPSLSENIRVISIVGRFLEHSRIF
                     YFENAGQPRVFLSSADWMPRNFYRRIELAFPIETPALRDQIINDVIPAFLNDRVKARE
                     LQPDGTYRRLTPEGEEPRRQAQWQFREVSRERMKKLGSSTKKARADRLVPIAVVKESG
                     ATGPTKSETQ"
     gene            7449..8138
                     /locus_tag="VIS53_09985"
     CDS             7449..8138
                     /locus_tag="VIS53_09985"
                     /inference="COORDINATES: protein motif:HMM:NF012692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEY5768153.1"
                     /translation="MKKKILVIDVGGSNVKLMISRAQRRKFKSGPEMTPREFVTQLKS
                     LLEDWAFDAISMGFPAPVRNGCIMTEPKHLGAGWTRFNFEKSLDKPVRIINDAAIQAL
                     GSYRGRRMLFLGLGTGLGSTLIWKNNVLPLELGDLPYGSGHIIENYLGKSGLKELGEK
                     QWEAEVLRAVVLLKKSLIADYVVLGGGSAKKLDRLPEGVELGHNRNAYLGGVRLWQTD
                     PHTRRPKWQIL"
     gene            8336..8707
                     /locus_tag="VIS53_09990"
     CDS             8336..8707
                     /locus_tag="VIS53_09990"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY5768154.1"
                     /translation="MRQVARFLNRLKVKPDLIVSSPLPRALQTAEVAAEQLKTKLRQD
                     EALEPGFGISELSTVLKRHPSKVLMLVGHEPDFSSVISALTGAFIKMSKAGVALIDID
                     PETEKGRLLWLFPPKFSRKAK"
BASE COUNT         1981 a         2289 c         2535 g         1913 t
ORIGIN      
        1 agcggtttgt ggatttatct tgtagcacca gttctcggcg cagctctcgg cgtaatcggg
       61 tgccgttgcg tccgggaaca tggctgttgc tccggcgctg agacagctga catttcttca
      121 gtatgacaac tcacgacttc atcagcaggc tacgagaagc tccagcgaag caattggtgt
      181 ttgctaactc tgacggtacg aggattaacg gcggctatca tctgactgaa ttaaaagcag
      241 catccttcga tacggtcgat tgcggcgccc agaagaatca gtggaacgag acaatcgtgc
      301 agctgtgggt tcctgaaaat gaggagaacg gcgagttcat gaccgcagca aaatttctct
      361 cgatttacga caaagtcgcg cgcctgatcc cgctcgatcc gacggctgaa attcgtttcg
      421 agtacggcga cgaaaatttt ccgccctcca attaccatgt tgaaatgatc agtgaaaatg
      481 aggccgagct tcgcgtgcag ttgcggctac ctcaagcgac gtgcaaggcg cgtgatcggc
      541 gcgaagccgg cgcggcttgt tgcggataat tctgactacg tcgcggagcg acgtggttct
      601 gtcacacaaa cgtaacagta aaggctttga ccggctgaat cggggtgcgg caacttcatc
      661 gcatgatgaa attccgcaga cgaatatttc ttgggctggc aatcgctctt ggactgagcg
      721 caagcgcttc ggcgcagatg acgatcaacg gcgcgggtgc gacgtttccg tatccgattt
      781 actcgaagtg gtttgacgaa tacgcgaagg tcgatccgtc ggcccggttc aattaccaat
      841 cgatcggttc cggaggcgga caaaaacaaa tactggccca aacggtcgat ttcggcgcat
      901 ccgacgggcc gatgagcgac gaaaaccttg ccaaggcgcc gggcaaactc ttgcacattc
      961 ccacggtcgc tggcgcggat gtggttgcgt acaatctccc tggaaatccg gccttgaagt
     1021 tcgatgccga tacgatcgcg ggaatttttc tggggaatat caaaaagtgg aatgacccga
     1081 aaatcacggc gctcaatgcg ggggtcagtc tacctgataa agacattgta gtagtgcacc
     1141 ggtccgatgg cagcggaacg acctacattt ggactgatta cctgagcaag atcagcccgg
     1201 aatggaaaag caaggtcgga acgaacacgt ccgtgaactg gccgaccggt atcggaggaa
     1261 aaggaaacga gggcgtagcc gggcaaatca agcagacgcc gggcgcgctt ggttacgtgg
     1321 acctaatcta cgcgatccag aacaaaatgc cgtatgcgga cataaagaat tcggccggca
     1381 gtttcgtaaa gccgacactc gagtcgatca ccgcagccat ggccacagcg caaataccag
     1441 acgattttcg cttctcaatt acaaacgcgc cgggcgagaa cgcctatccg atcgcaggcg
     1501 cgacatggtt gcttgtttac caacagcaaa aagacgccac taaaggaaag aagctggtcg
     1561 aatttctcaa atgggctcaa aaggagggag aaaaaatggc gaaagacctc gactacgcgc
     1621 cattaccgga agacctgcag cagcgcgtcc tgaaacggat tgacgaaatt aaaatgtagg
     1681 gacgacttcg agtaatcagt ttgagtatgt cagccgtcac tgtcgaggaa gcagacgcga
     1741 ttcacccggc gcaggcgcgg atgtcgccgc cgtcccggtt tgctgataag gcattttatt
     1801 ggcttacgct gtcgatggcg tttgccgtgg ttttgctggt cattttgatc ggctggcaac
     1861 tgggacaggg ttcctggcag gcgatccaaa aattccgatt ccattttgtc gccacgtcga
     1921 cgtgggaccc cgtggcggaa caatacggcg cgttgccgtt catttacggc acagcaatct
     1981 cctcgctgat tgcgttactt atcgctgtgc cgctgagcat tgcgacggcg gtttatttga
     2041 ccgaactcgc gccgctctgg atccggcaac cgatcgtctc gcttatcgaa atgctggccg
     2101 cgatccccag cgtaattctc gggttgtggg gaattttcgt catgatcccg tggctgcgcg
     2161 attatccgtt tcctttcctg caacggatac tgggttggac tccatttttc agcggcccga
     2221 tttacggccc atgcatgctg gctggtggaa tcatcgttgc gattatggtt ctgccgatca
     2281 ttacgtcggt ctcgcgcgag atattgcgca gcgttcctga tttgcagcgc gaagccgcgt
     2341 atgccctggg cgcaactcga tgggaagtga cccgcattgc ggtgcttagc tacgccagga
     2401 aaggtttatt cggcgcagtc atactcggcc tcggccgtgc gctgggcgaa acgatggcgg
     2461 tgacaatggt gatcggtaat acgccgcaga ttgccgcgtc attgttcaaa ccgggttata
     2521 cgctagccag cgtaatcgcg aatgaattta cggaagcgac caccgacatg tatctgcaag
     2581 ctttgttcga gattgggctg gtgttgttcg gcgtcacaat tttgatcaac ctcctcgcgc
     2641 aactcctgtt gaaaacgatt accgcaggcg cagcgccaga tagggttcag taaatatgga
     2701 gatacagcgc aaagaccatc acagttggcg caagctcaag agcacgctca tctcagggct
     2761 cacgttctgt tccgccgtgc ttgtgatcgc gccgcttggt ctcgtgtttt ttcatgtgct
     2821 tatgagcgga ataggcgcgg ttaatctcga attttttacg aatctgccga agccggtcgg
     2881 cgtgcccggt ggtggaatgg ccaatgcgat cgttggcacg cttgagttat tggcgcttgc
     2941 gtcggtcatt ggaattcccg tcggcgtgct tgggggaatt tttctggctg agtacggcac
     3001 ggcccgtgtg aatgcagtgc tgcgcttcat tgcggacgta cttaatggcg tcccatccat
     3061 catctggggc gtggtcgttt atgggctgat cgtgttgcgt ttcaaaagtt tctcggggta
     3121 cgccggcgga ctcgcgctcg ggttaatcat gatcccattg atcctgcgca caaccgagga
     3181 agtgattctt cttgtgcctg ccggctatcg cgaagccgct ctcgcgctgg gcatcgcacg
     3241 ctggaaaacg atcatccaga tcgtggtgaa gaccgcatcg cgcggaatca tcacgggaat
     3301 tcttctcgcc ctcgcgcgcg tcggcggcga aactgcaccg cttcttttca ccgcattcgg
     3361 caaccatttt tggaaccgcg acctgaacga gccgattgca gcgctgcctc tgcaaatttt
     3421 tacatatgca atctcgccgt acgatgactg gcatcgccag gcgtgggccg gagcgcttgt
     3481 tctcgtcaca ggcgttttct gcgttaatgt gttggtgaga attgtcaccc gtgttcgcac
     3541 cgcgtcggct taaattctca agatgattgc tgcacctatg tcgcgacctg aagtagttga
     3601 acctcgcgat cccggcgccg cggtattgtt agacacagag ggagaggcgc ttcctctggc
     3661 aatggaggcc aaaaacgtct caatgtggta cggatcgaag cgcgcgattg acaacgtgag
     3721 tctggacatg cccgccaaag ccgtcaccgc gatcatcggg ccgagcggct gtggaaaatc
     3781 gacgtttatc cgcgctctca accgcatgca cgagttagtg ccacacgcgc gcatcgaagg
     3841 cagcgtgttc cttcacggcc aaaatctcta cgcaagcagt atggacccgg cagttgtgcg
     3901 caggcgcgtg ggtatggtgt tccagaaatc caatccgttc ccgaccatgt cgatcggcga
     3961 aaacgccatc gtcggccttc gcttgaatgg tgtgagcgat cggagattcc ttaacgaacg
     4021 gcttgagcaa tcattgagga tggcggcgtt gtgggatgaa gtgaaagacg atttgcacaa
     4081 atccggaacg agcctttccg gtggccagca acaacggctc tgcattgcgc gcgcgctagc
     4141 tgtggaaccg gaagttcttt tgatggacga accatgctcg gcgctcgatc cgatcgctac
     4201 cgcgaagatc gaggagctga tccagggact gaaaacgcaa tacacgatcg tcatcgttac
     4261 gcacaacatg cagcaagcgg gacgcgtctc cgattttacc gccttctttt acatgggccg
     4321 gctcatcgag gttggttcga ccacgaaaat tttcaccaat ccgaacgaga aacagacgga
     4381 agattacatc actgggagat ttgggtgatt tctaaacgcg cccgttgtcc gcgtcgcgaa
     4441 tttatgaaca gcaaacagcg aggaccataa tggtgatacc gaagcatatt cttgggacat
     4501 tcgatgaagc gctaacatcg ctgcgcaacg acctgctgat gatggctggc ctggctgagc
     4561 gcagcctgga tcgagcactc aagggcttgc tgcagcgcaa tgacgatctc tgcacacacg
     4621 caatcgcgga tgacgaagag atcgatcaat tggagaaaca gatcgacaag gacggattcg
     4681 aaattttgct tcgcttccag ccggtggctt cggatctgcg gcgtgtgatt tcggccatta
     4741 aactttcgcc aaacatcgag cgggtgggcg atcaggccac gaacatcgcg aaacgcgcgc
     4801 gcaagttgaa tcggcatccg ccgttgcctg aagtgcaaat gatcgtgcca atccaggcga
     4861 acgcgatgtc aatgttcaag gacgccatta acgcgtacgt gcgtgaaaat atcgagctgg
     4921 cgcactcggt ctgcagccgc gacaagcaac tcgacgatat gaatcgcgat gcaaacacga
     4981 aactaaccgc ccggatgatg gaggatagcg agcagttgcg cgggtatttt aacctcatcc
     5041 tgatttcgcg cgctctcgaa cgggtcggcg atcacgcaac caacattgcc gaggatgccg
     5101 tttacaccgc ggttgcggaa gacatcaggc acaagaacgt ggcggcctct gtctgagacg
     5161 cggcgttgcg catacgcggc tgatcggcaa tcgttgaaca tgccgcaggc ccaggccatt
     5221 ccccgcactg aagaaaaaag cgatgcggcc gctgttccgc aggttgtcca aactctccac
     5281 gaccgttttg gcgatccgaa gaatttcatc aaccgggagc tgagctggct cgcgttcaat
     5341 caacgcgtcc tcgaggaagc gcaggaccct acgcaaccac tcattgaacg ggttaagttc
     5401 ctcacgattt tcagctcaaa tctggatgag tttttcgaga ttcgcgtggc cggaatcaaa
     5461 caacagattg aaagcgagac gagcgatgtt ggtcctgacg ggttgagtcc cacggagttg
     5521 ttcgaccgca tccagaagac ggtgcgcgag cttgtggcga cacagtatgc gctttggaaa
     5581 aacgagtttc tgccggagtt ggcgaagaac gggatctatg tgcgcgagat cgcggacttg
     5641 tcgacgaaac gcagtgcctg ggcaaatcgc tactttcagc aggaagtttt cccgatgctg
     5701 acgccgctgg ccgtggacgc cagtcatcca ttcccgcatc tgttgaatcg cagccacaat
     5761 ctgttggtgc gagcgaagac gcgtcgtcgc ggcgagccgc tgcatgccat tgttcaagtg
     5821 ccgcgcgttg tgccgcggct tattctgatg cctcgcggcg ccggtgcgaa cgagccgtgg
     5881 gaatacattt atctggcgtc tctaattaaa cagcacatcg gcgaattgtt tcccggctta
     5941 atcctggacg gcgtgcacgc gtttcgcgtc acccggaata gcgatctcta cattgacgat
     6001 gaggaggcgg agaatctttt gcgaacgatc gagcacgaac tgcgacgctc cagccgcggc
     6061 aacgccgtgc ggttggaagt ggaagcggat tgtccgaaag attttctcga gctgcttctc
     6121 gagtttttca gtctatctga agcggacgct tacaagctcg atggcccgtt gacgatgacg
     6181 catcttgctc cgttggttgc caacgacgcg tttgccaaac tgaaagaccg tccgttccaa
     6241 ccggcccgcg atcctgcgtt gccgccacac gcggatttct tcgaagtgtt acggcgccag
     6301 gacgtgttgc tgcatcaccc gtacgacagt ttcgatgaag tcgtcgagtt ggtcgagacg
     6361 gcggcaaaag atccgcaggt gcttgccatt aaaatgacac tgtaccgcac aagcggggac
     6421 tcgcccattg tggaggcgct catcgacgcg gctaacgcag gaaaacaggt taccgcgatt
     6481 gtcgagctgc gcgcgcgttt tgatgaggcg agcaacattc agtgggcgag acgcctggaa
     6541 gaagtcggcg cgcacgtgat ctatggtgtg gtaggtctca agacgcattg caaggcgttg
     6601 ctgatcgttc ggcgtgacgc cgacgaactc cggcgttacg tccatctcgg cacgggaaat
     6661 tatcactcgc ggaccgcacg catttacacc gatttcagtc tgctcaccag tgaacggcag
     6721 ctgagcgaag aagtggcgac cgttttcaat acccttaccg gcctcgccgg gtatccggga
     6781 ttgaaaaaat tgatggtctc gccgttcgac atgcacagtc ggttcgtcaa gctgatcgaa
     6841 cgggagcgcg acaacgcgct ggcaggcaag ccggcccgca tcgttgcgaa gatgaacgcg
     6901 ctggtggatc aggagatcat tgagaagctc tacgaagcgt cctgcgcaga tgtaaccatt
     6961 gatctggtcg tgcgcggaat ctgttgcttg cgtccgaaag ttccaagtct cagtgaaaac
     7021 atccgtgtca tcagcatcgt tggccgattt ctcgagcaca gccggatctt ttatttcgaa
     7081 aatgccgggc agccgcgggt ttttctttcc agcgcggatt ggatgccgcg caatttttac
     7141 cggcgaatcg agctggcgtt cccgatcgag acgccggcgt tgcgggatca aatcatcaat
     7201 gacgtcattc ccgcgttcct gaacgatcgc gtgaaggcgc gggaattgca gccggacggc
     7261 acgtaccgac gcttgacacc cgaaggcgaa gaaccgcgcc ggcaggcgca gtggcaattt
     7321 cgcgaagtat cacgcgaacg catgaaaaag cttggtagtt cgacgaaaaa agcgcgtgcg
     7381 gaccggctgg taccgattgc cgttgtaaag gaaagtggcg cgaccggacc gaccaaatcg
     7441 gagacgcagt gaagaaaaaa atcctcgtca ttgatgtcgg cgggtcgaac gtgaagctga
     7501 tgatttcgcg tgcgcaacgg cgaaaattca agtccggtcc ggaaatgacg ccgcgcgaat
     7561 tcgtgactca actcaagtcg ctgttggagg attgggcgtt cgacgcgatc tcgatgggat
     7621 tcccggcgcc ggtccgcaat ggctgtatca tgaccgagcc gaagcatctt ggggctggct
     7681 ggacacgatt caattttgag aagtcgttag acaaaccggt ccgcatcatc aatgacgccg
     7741 cgattcaggc gctgggcagt tatcgcgggc ggcggatgtt gtttcttgga ttgggcaccg
     7801 gacttggatc gaccctgatc tggaaaaaca acgtgctccc acttgaactc ggcgatctgc
     7861 cttacggcag cggccacatt atcgagaatt accttggcaa gtccggacta aaagagctcg
     7921 gcgaaaaaca atgggaagcc gaagtccttc gagccgtcgt gttgttgaag aaatcgttga
     7981 ttgccgatta cgtcgttctc ggcggtggaa gcgcgaagaa attggatcga ctgccagaag
     8041 gggtcgaact gggacacaat cgaaacgctt atctcggcgg cgttcgtctc tggcaaaccg
     8101 atccgcacac ccgcagacca aagtggcaaa tcctgtgaga aattaagtct gtcatgttga
     8161 gcgaactcga gacattccgc gaaaacctgt agattgtgct acgggatttc tcgactttgt
     8221 ttggaatgat tatctagaac atgcaactct atttcctcag acatggcgaa gccgattggc
     8281 cgggctggac caagccggat gatgaacggc cgctcacaga tttggtaaaa aagaggtgcg
     8341 gcaggtggcg aggtttctca accgtctcaa ggtgaagccg gatttgattg taagcagtcc
     8401 gctgccgcga gcgttgcaga cggcagaggt tgcagcggaa cagctgaaaa caaagttgcg
     8461 ccaggacgaa gcgcttgagc cgggatttgg gattagcgag ttgagcactg tgctcaagcg
     8521 gcatccctca aaagttttaa tgctggtcgg tcacgagccg gacttttcga gtgtgatctc
     8581 cgccttgacg ggtgctttca tcaagatgtc caaagcaggt gtcgcgctga tcgacatcga
     8641 tcccgagact gagaaaggaa gacttctctg gctgttcccg ccaaaattct cgcgcaaagc
     8701 gaaatagctc tcacgcgc
//
LOCUS       DATDAJ010000403         3459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2328655, whole genome shotgun sequence.
ACCESSION   DATDAJ010000403 DATDAJ010000000
VERSION     DATDAJ010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2328655"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..984)
                     /locus_tag="VIS53_09995"
     CDS             complement(22..984)
                     /locus_tag="VIS53_09995"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEY5768155.1"
                     /translation="MDSKIPGLHHVTAIASDPQRNLDFYVGFLGLRFVKRTVNFDDPG
                     TYHFYFGDRRGTPGTILTFFPWPGARRGIRGTGQVEATAFAIPPDSIGYWLERLKQQH
                     VTAERTPTRFGEEVIRLIDPDGLLIEFIAAAAGVSPVDIEPWPDSAVPAEHALRGFHS
                     VSAAFEGYERTARLLTESFGYRLVDESGNRFRFASPDDSAPGRIVDLLCQPDTAMGRV
                     AAGSVHHIAFRAKDDAEQLQWRERLVDLGYNVTPVIDRTYFHSIYFREPGGVLFEIAT
                     EPPGFTLDEKVEDLGMHLRLPPWMESERSQIEEILPTIQVPTKS"
     gene            complement(1039..1266)
                     /locus_tag="VIS53_10000"
     CDS             complement(1039..1266)
                     /locus_tag="VIS53_10000"
                     /inference="COORDINATES: protein motif:HMM:NF018961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HEY5768156.1"
                     /translation="MATKDKSTESVYRVTEVIGTSAQSWEDAAKAAVQTAAGTLRDLR
                     IAEVVKMDVKIEDGKVLEFRTRLQLSFKYEG"
     gene            complement(1480..3204)
                     /locus_tag="VIS53_10005"
     CDS             complement(1480..3204)
                     /locus_tag="VIS53_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006982562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY5768157.1"
                     /translation="MRPNDKTWWEKTFPAAEWLRSYHRAWFGLDLLAGITLAAYLLPA
                     ALGDASLARLPPQAGLYACLFGGLVFWIFCGSRQTAISVTSAISLVIGASLGEITGGN
                     TMRFAALAAATALLVSLIAFVAWLARAGVMVHFISESVMTGFKCGVALFLASTQLPKL
                     FGFHGAHGSFWENTGFFLKHVNETNSMSILVGGIALALLVLGKIFLKHKPVALFVVIG
                     GIVAASMLSLETRGVNLIGSIPQGIPPLRLPAVQWHDLNQVLPLAFACFLLGVVETAA
                     IGRMFAAKHGGRFDANQENLALATSNLFAGLGGGFPVSGGTSQSLVNEEGGAKTPLST
                     ALAAVFILVVVLFFSRLLSALPQPVLAAVVLMAIAGLLNLSTLKELWLNDRSEFVVAM
                     AAFAGVLTFGLLRGVMLGALISLVQLVRVSSRPHVAFLGRIPGTRRFSDRDRHADNEL
                     IPNVMIFRPESALIYFNVDNVCEAILSRVRVEATSPKLVVVDLSAAPLVDMQSAHTLA
                     STADELRAIGIRFQAVEPRSAVRDRFRHEGVDSKLGGINRFTSVADVIDHFLSESEPS
                     ADAVKSES"
BASE COUNT          835 a          969 c          960 g          695 t
ORIGIN      
        1 ggatgaagtc aggctgcagc ctcatgattt cgttggcact tgaatagtag ggagaatttc
       61 ttcgatctgc gaccgctccg attccatcca cggcggaaga cgtaagtgca taccgaggtc
      121 ttccactttt tcatccaacg taaaaccggg tggctcagtc gcgatttcga acagaacgcc
      181 gcccggctcg cggaaataga tggaatgaaa gtaagtgcga tcgattaccg gcgtgacgtt
      241 gtagccaaga tcgacgagac gctcgcgcca ctggagctgt tccgcatcgt ccttcgctcg
      301 aaacgcaatg tgatgtactg aaccggccgc gacgcggccc atcgcggtgt cgggctgaca
      361 cagcagatcg acaattctgc caggcgcaga gtcgtccggg gatgcaaacc gaaaccggtt
      421 gcccgattca tcaaccaaac gatagccgaa gctctcggtg agtaaccgcg cagttctctc
      481 gtatccttca aacgcggcgg atacactgtg gaagcctcga agcgcatgct cggctgggac
      541 agcgctgtcc ggccacggct cgatgtctac aggcgacaca cccgccgctg cagcgatgaa
      601 ctcaatcaga agtccatcag gatcaattaa ccgaatcacc tcctcgccga aacgcgtagg
      661 ggttcgctca gccgtcacgt gctgttgttt caaacgttcc agccagtaac caattgaatc
      721 cggtggaatc gcgaacgctg tcgcttcgac ctggccggtg ccgcgaattc cgcgtcgcgc
      781 tcccggccac ggaaaaaaag ttaggatcgt tccgggcgtc ccgcgccgat cgccgaaata
      841 aaaatggtac gttcccggat catcaaaatt caccgtgcgc ttcacgaaac gcagaccgag
      901 aaacccgacg taaaaatcga ggttccgctg cggatcgctc gcgatcgcag tgacgtgatg
      961 cagtcccggg attttactgt ccatcaggac gatgacgatc ctcgcttgat ggtgcgcgca
     1021 gattcttccg cgtgcgaact agccttcgta cttaaaggac agttgcaatc gcgtccgaaa
     1081 ctcgagcact ttcccgtcct caatcttcac atccattttc acaacctcgg caatacgcag
     1141 atcgcgcagc gtccccgccg cagtctgcac agcagctttt gccgcatcct cccaggattg
     1201 cgcactggtg ccgattactt ccgttactct gtagactgac tccgtagatt tatcttttgt
     1261 ggccataatg tttccttctc tcagtttgct ggatcttccg attacattcg tttccaggca
     1321 agtcagtcaa aggtttgtgg tatctgcctg gaagccgcat aggaccgatg tcagagagac
     1381 gccggcagct gatgaaaaaa gcgatcgcgg ctggccttca ctgataagcc acgtgtagaa
     1441 tcgcctaacg accttccttc gttgcgaaga tcagtggatc tagctctcgg atttgaccgc
     1501 atctgctgag ggctccgatt cgctcagaaa gtgatcgatg acatcggcca cgctggtgaa
     1561 acgatttata ccgcccaatt tgctgtcgac gccctcatgg cggaatcgat cgcgcacggc
     1621 cgagcgcggt tcgaccgctt gaaaccggat gcctatggcg cggagttcat ccgccgtgct
     1681 agcaagggtg tgcgcactct gcatgtccac gagtggtgcg gctgagagat cgactactac
     1741 cagttttggc gatgtcgcct cgacacgaac gcggcttagg atcgcctcgc atacattgtc
     1801 gacgttaaag taaatgaggg ccgattcggg ccggaaaatc atcacgtttg gaatcagctc
     1861 gttgtctgca tgccggtcgc ggtccgagaa acggcgtgtg ccgggaattc gtccgagaaa
     1921 agcaacatgg gggcgcgatg aaacgcggac caattgcaca agtgaaatca aagctccgag
     1981 catgacgcca cgcagcaaac caaaggtgag cactccggcg aaagctgcca tggccaccac
     2041 aaactcggaa cgatcgttaa gccaaagttc cttcaacgtt gaaagattta gcaaacccgc
     2101 gatcgccatc aaaaccacgg cggcgagcac cggttgaggc agcgcgctca atagacggga
     2161 gaaaaagagc acgactacca ggataaagac cgcagcgagg gcggtggaga gcggtgtctt
     2221 cgcacctcct tcttcattga cgagcgactg cgatgtgccg ccgctcactg ggaagccacc
     2281 accgagtcca gcgaacagat tcgatgtggc gagtgctaga ttctcctggt tagcatcgaa
     2341 tcgcccgccg tgcttcgcag cgaacatccg tccgatcgcg gccgtttcga cgacgccgag
     2401 gagaaagcaa gcgaaggcaa gcggcaggac ctggtttaga tcatgccatt gaacagccgg
     2461 taatctgagt ggaggtattc cctgtgggat gctcccaatc aggttcacac cacgcgtttc
     2521 caatgagagc atcgaggcag caacaatgcc tccgattacg acaaagagcg cgaccggttt
     2581 gtgcttgagg aaaattttgc caagaacgag tagtgccaga gcgattcctc cgacgagaat
     2641 ggacatcgag ttggtttcat tcacgtgctt gaggaaaaag cccgtgttct cccagaagct
     2701 tccatgcgcg ccgtggaaac cgaagagctt cggcaattgt gtgctggcaa ggaaaagcgc
     2761 cacgccgcat ttgaagccag tcataacact ttctgagatg aaatggacca tgactcccgc
     2821 cctggccagc caggcaacga aagcgataag cgacacgagc aacgccgtgg cggctgcgag
     2881 cgcggcaaaa cgcatcgtgt tgccacctgt aatctctcca agcgacgcgc cgatcacgag
     2941 cgagatcgcg gaggtgacgg agatcgcggt ctgccgcgag ccgcagaaga tccaaaaaac
     3001 caacccgccg aacaaacagg cgtacaggcc agcttgcgga ggcaagcggg caagagacgc
     3061 gtcgcccaaa gctgccggaa gcaaatacgc ggcaagcgta atgccggcga gaagatccaa
     3121 gccaaaccaa gcacgatggt aactgcgcaa ccattcggcg gcgggaaagg ttttttccca
     3181 ccaagtctta tcgttaggcc tcatgagctt tcatcgaaaa tcgtcgaacg taagtttatc
     3241 ctgttcgatt tgatgtagct agtttgatca ggtcaacatc gtgaatttaa ggcgagagcg
     3301 tcgccggtgt gttctggatg tgcgccgtga cgcgggagtg ccaaaaccgc agtctggcgt
     3361 tgcaacaatc gacggggtcg agtacgactg aagacgtcat gttttcgatt caaaagctgc
     3421 tcggacgcga cggaaagttt tacgatttgc tcgaagcca
//
LOCUS       DATDAJ010000404         3707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2335955, whole genome shotgun sequence.
ACCESSION   DATDAJ010000404 DATDAJ010000000
VERSION     DATDAJ010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2335955"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            130..402
                     /gene="yidD"
                     /locus_tag="VIS53_10010"
     CDS             130..402
                     /gene="yidD"
                     /locus_tag="VIS53_10010"
                     /inference="COORDINATES: protein motif:HMM:NF013932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEY5768158.1"
                     /translation="MLGLVRFIIRLYQCTLSPLLRLLCGPDCGCRFTPTCSRYFLEAV
                     ETHGVRHGSWLGLKRLARCQPWGGCGYDPVPPRWVGGSQNEARRCV"
     gene            421..2139
                     /gene="yidC"
                     /locus_tag="VIS53_10015"
     CDS             421..2139
                     /gene="yidC"
                     /locus_tag="VIS53_10015"
                     /inference="COORDINATES: protein motif:HMM:TIGR03593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY5768159.1"
                     /translation="MDRTAWIVVALCVVGLVVWEMYLAKQMTPRPAPITATPGQISPT
                     ATPAILAPSPSPVATPAAAPQGAESVPTFAEKVETLRNSDFELRFTNRGGGIAEAIMF
                     NHIAEDAKPVILNSPKHMPIGAIVDDPAKPALPEFTLARDSDSSIRCERAAPDGITIR
                     KKFSLLQSSEKKDSFLLELNLEVQNTGTQPYDRDHYFVALGSAAPRHRNDYPYYTRLV
                     WCINGKARDTNVSAFQGSGGFLGIGAHAAQPVFQENFAGAEWTAVTDQFFATIIAPLN
                     AKATGIWGRSFDVSTEQNTIGIEGAMRMPGFQVQPGQTYTARFQIWTGPKIYHQLAQL
                     EHNEAEIMNFGIFKIVSQFLLNFLNTIHGFVKDYGVAILVLTVVVRCVLWPLQSKANQ
                     TMRKTALLGPKMQELREKYKDDPTRMNQEVMKMYKQYGINPVGGCLPMAIQIPIFFGL
                     YQMLAQAVELRNAKFLWVHDLSQPDTVAHLPVLGFPINVIPLLMAATQVWLMAMTPKT
                     GDPTQRRIMMFTPLIFLFFCYNFAAALALYYTAQNLFSILQFWQNKRQPMPTLEKVAP
                     AAKRKR"
     gene            2136..2621
                     /locus_tag="VIS53_10020"
     CDS             2136..2621
                     /locus_tag="VIS53_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HEY5768160.1"
                     /translation="MMTPKDLLDTMLGYLGFVVQIEETTNEGGNATLQIYTEESRRLI
                     GRDGETLEAIQFLLNRLLQARDKDAEKVIVDCEHYRSMREDRIVHRVRELAERVRITG
                     RSLQLEPMNSYERRLVHNAFKDDPEVATWSPSDSARIKQITLLKRQPKREAASQGKAI
                     S"
     gene            complement(2618..>3707)
                     /locus_tag="VIS53_10025"
     CDS             complement(2618..>3707)
                     /locus_tag="VIS53_10025"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY5768161.1"
                     /translation="AASTDISKAVRAAYGADEDYTALAERSIKLWRQWTEEFGTQLYH
                     EVGVMFVRRAKMEAGDFEHESLKLLEKCGLKVARMDTSQLWKRFPAWNPELYRDGVLE
                     IEAGYAESGRAVAMLIERAKSAGVELRERVMFSRLDERGNRVNGIALDDGQRIAADFV
                     VMAAGAWTPYLLPFTRKFFRATGQPVFHLKPSEPELFEPERFPVFGADITTTGYYGFP
                     INRDGVVKIANHGTGREMSPASPERVVTAEDEKNLREFLASTFPSLADAPIVYTRVCM
                     YCDTHDGHFWIARDPEREGLLVAAGDSGHGFKFAPVLGEIIADAVEGRDNPLLNKFRW
                     RPEVHAGAGTDVARSQLKEGRSPERRGD"
BASE COUNT          817 a         1079 c         1016 g          795 t
ORIGIN      
        1 gcaccagcat gagctgcgac aagatatttg gttcgtaatt attgccagac acgaagccga
       61 ggacgcgggc tacgccgcgt tggaagatga atggttgcgc ctcgctaggc gcgcttctat
      121 tctgctctga tgctcgggct ggttcgtttt attattcgcc tctatcagtg cacgctttca
      181 ccgttgcttc gtctgctttg cggtcctgac tgcggctgcc ggtttacccc gacctgttcg
      241 agatattttc tggaagcggt ggagacgcat ggcgttcggc acggaagctg gctgggtttg
      301 aagcgcctcg ctcgctgcca accatggggt ggatgtgggt atgacccggt gccgccgcgc
      361 tgggtcggcg gatctcagaa tgaggcccgt cgctgcgtct gatcgtgcaa aaccgaattt
      421 atggatcgaa cagcgtggat tgttgtcgct ctttgcgtag ttgggctcgt cgtatgggaa
      481 atgtatctgg caaaacagat gacgcccaga ccggctccca tcactgcgac gcccggacaa
      541 atttcgccaa ccgcgacgcc ggcgatcctc gcgccttcgc cgtctccggt tgccacgccg
      601 gctgctgcgc cacagggcgc tgagtcagtt ccgacctttg cggaaaaggt cgagacgctg
      661 cgcaattcag atttcgaatt gcgctttact aaccgcggcg gcggcattgc cgaggcgatt
      721 atgttcaatc acatcgccga agacgccaag cctgtgatct tgaattcgcc gaagcacatg
      781 cccatcggtg cgatagttga tgatcccgca aagcccgcgc ttccggaatt tacgttggcg
      841 cgtgactccg acagcagcat tcggtgcgag cgcgccgcgc ctgacggaat cacaatccga
      901 aagaaatttt cgttgctgca gtcgagcgag aagaaagaca gttttctcct cgagctgaat
      961 ctggaggttc agaacacggg tacgcagccg tacgaccgtg atcattattt cgtcgcgctc
     1021 ggttcggcgg caccgaggca tcggaatgac tacccgtact acacgcgact ggtttggtgc
     1081 atcaatggta aagccagaga cactaacgtg agtgcatttc agggtagcgg cggttttctc
     1141 ggtatcggtg cgcatgcggc gcagccggtt ttccaggaga attttgccgg cgcagaatgg
     1201 acagccgtca ccgatcagtt tttcgcgacg atcatcgcgc cattgaacgc aaaggctacc
     1261 ggcatttggg gccgttcgtt tgacgtctca accgagcaaa acacgatcgg catcgaaggc
     1321 gccatgcgca tgccgggatt tcaggtgcag ccagggcaaa cttacaccgc gcgtttccag
     1381 atctggacgg gaccgaaaat ctatcatcag ttggctcagc tcgagcacaa cgaagcggag
     1441 atcatgaact tcggtatttt caaaatcgtc agccaatttc tgctcaattt tctcaacacc
     1501 attcacggtt tcgtcaaaga ttacggcgtc gccattctcg tgttgaccgt tgtcgtacgc
     1561 tgcgtgctct ggccgctcca aagcaaagcg aatcaaacaa tgcgcaagac agcgttgctt
     1621 gggccgaaga tgcaggagct gcgcgaaaaa tacaaagacg atccgacacg gatgaaccag
     1681 gaagtgatga agatgtacaa gcagtacggg attaatccgg taggcggttg tttgcccatg
     1741 gccattcaga tcccgatttt cttcgggctt taccagatgc tggcacaagc tgtggaattg
     1801 cgaaacgcga agtttctctg ggtacacgat ctgtcccaac ccgataccgt agcgcatctg
     1861 cctgtgctcg gtttcccgat caacgttatc ccgctgctca tggcagccac gcaggtgtgg
     1921 ctaatggcga tgacgccgaa gaccggcgat cccacgcaac gccgcataat gatgtttacg
     1981 ccgctgatct tcctattttt ctgctacaat tttgcggcgg ctctggcatt gtactacacc
     2041 gcccaaaatc ttttcagcat cctgcaattt tggcagaaca aacgacaacc catgccgact
     2101 ctcgaaaaag ttgctcccgc cgcaaaacga aagcgatgat gacgccgaaa gatctgctgg
     2161 acaccatgct cgggtacctc ggtttcgtgg tgcaaatcga ggagaccacc aacgaaggtg
     2221 gcaacgcgac gctgcagatt tacaccgagg aaagccggcg gctcatcgga cgagacggcg
     2281 agacgctcga ggccattcaa tttttgctga atcgtttgct gcaagccaga gacaaggacg
     2341 ccgaaaaagt catcgtcgat tgcgaacatt accggtcgat gcgcgaagat cgcatcgtgc
     2401 atcgcgtgcg tgagctggcc gagcgggtgc gcatcaccgg ccgttcgctc cagctcgagc
     2461 cgatgaattc ttacgagcgg cgtctcgtcc acaacgcttt caaagacgat ccggaagtcg
     2521 cgacgtggag cccgtcagat tctgcgcgca tcaagcaaat caccctgcta aagcggcagc
     2581 cgaaaagaga agcagcttct caaggaaagg cgatttccta atcgcctcgg cgctccggag
     2641 accgcccctc cttgagttgg gaccgcgcca catctgtgcc ggctcccgcg tgcacttccg
     2701 gtcgccatcg gaatttattc agcagcggat tatcccttcc ttccactgcg tcggcaatga
     2761 tctcaccgag caccggggca aatttgaatc cgtgaccgct gtcacccgcc gcaacgagta
     2821 acccttcgcg ctccggatcg cgcgcgatcc agaaatgccc atcgtgcgta tcgcagtaca
     2881 tgcacacacg cgtgtagaca attggcgcat cggcgagcga ggggaaggtc gaagcgagaa
     2941 attcgcgcaa gttcttttcg tcctcggcag tcaccacacg ctcgggggag gcgggcgaca
     3001 tctcgcgtcc agtaccgtga ttagcaatct tcacgacgcc gtcccgattg atcggaaatc
     3061 cataatagcc ggttgtcgta atgtctgcgc cgaaaaccgg aaaacgctcc ggctcaaaca
     3121 actcaggctc tgaaggcttg aggtgaaaaa ccggctgtcc ggttgcgcgg aaaaacttcc
     3181 tggtaaaagg caacaggtac ggcgtccacg cgccagccgc catgacgacg aaatccgcgg
     3241 cgattcgctg tccatcatcg agcgcgatgc cgttcacgcg attgccccgt tcatccagtc
     3301 gcgaaaacat cacgcgttcg cgtagttcaa cgccggccga tttcgcgcgc tcaattaaca
     3361 ttgcaaccgc gcgaccgctc tccgcataac ccgcctcgat ctcaagaacg ccatctcgat
     3421 aaagttccgg attccatgcc ggaaaacgtt tccataactg cgacgtgtcc atacgcgcca
     3481 ctttgagccc gcacttttcg agaagtttca aactttcatg ttcaaaatcg cccgcctcca
     3541 ttttcgcgcg gcgaacgaac atcacgccga cttcgtggta cagctgggtg ccgaattcct
     3601 cagtccattg gcgccagagt ttgatcgaac gttcggcgag cgcagtgtaa tcctcatcag
     3661 cgccgtaggc agcccgcacg gccttactga tatcggtgga cgccgcc
//
LOCUS       DATDAJ010000405         4298 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2343772, whole genome shotgun sequence.
ACCESSION   DATDAJ010000405 DATDAJ010000000
VERSION     DATDAJ010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4298
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2343772"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..751
                     /locus_tag="VIS53_10030"
     CDS             <1..751
                     /locus_tag="VIS53_10030"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY5768162.1"
                     /translation="SLVVVSFLKAMAKGMLRIAATADLHYAKHSRGMMQEAFAEISGS
                     ADVLLLCGDLTEYGLPEEAEELAADIRSAVRIPCIGVIGNHDYESGHPETVANILDQT
                     GVTMLNGEAVEIAGVGFAGICGFGGGFGRRMLNAWGEPLIKQFVQESISHAIRLEQAL
                     VKLQTERRIVVLHYSPIRETLQGEDPEIYAFLGSSRLEEPINRFRSTAVFHGHAHNGL
                     TDGKTSTGIPVYNVSAPVLHKTGKPYRIVEL"
     gene            complement(762..1301)
                     /locus_tag="VIS53_10035"
     CDS             complement(762..1301)
                     /locus_tag="VIS53_10035"
                     /inference="COORDINATES: protein motif:HMM:NF019440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768163.1"
                     /translation="MTRETVIAYWLIPSEPAHSFFQRIINDLVRRCDAPAFEPHVTIH
                     VGADRADTAKKALGDAARNCKLIGLKPLGVDQSAEFIKTLFVQFGMSAELSKINGIIR
                     EAANYSSQYELKPHLSLLYKNLAAATRCELAASITVPFSEVTFDAIKAVRCVSPIESG
                     ADVEAWHVVAAASLSGDRV"
     gene            complement(1323..1910)
                     /locus_tag="VIS53_10040"
     CDS             complement(1323..1910)
                     /locus_tag="VIS53_10040"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY5768164.1"
                     /translation="MLSEAKHLNFSNRAIQKRSEILRLAQNDTGRWIVILVSLVKEKR
                     MPIRAKYVHTNLIARDWKRLVRFYKEVFGCEPKGPERDLSAAWLDRVNSVPNARLHGV
                     HLRLPGYDDDGPTLEIFSYDQLIERGLPKANECGFGHIAFAVENVDEALQAVIAAGGG
                     TVGEIATAEVKGVGLLRVVYARDPEGNIVELQKWS"
     gene            1942..2307
                     /locus_tag="VIS53_10045"
     CDS             1942..2307
                     /locus_tag="VIS53_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 domain-containing protein"
                     /protein_id="HEY5768165.1"
                     /translation="MPTNVLGTELKCCCRDPMTGFYRDGYCRTGPEDVGQHTVCVQVT
                     EEFLDFSVLDGNDLVTPHPEWGFPGLKPGDRWCVCVTRWKSALDHNRAAPVDLEATHA
                     SALEFVTLEELKAHAVTQA"
     gene            2369..3661
                     /locus_tag="VIS53_10050"
     CDS             2369..3661
                     /locus_tag="VIS53_10050"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY5768166.1"
                     /translation="MKLPFSLFLALRYLKPKRTFLSIITLISVIGVMLGVTVLILVIA
                     VMTGFDRELRQKVIDFDAHILVNSEDVFRDWRALKAKIDKTPGVVATAPFVQGPVIVE
                     FHNRRLAPLIRGIDPEQEEKVIPLQKFIKLGKLDLEGESTVLGIELARKLGVRIGDKV
                     TIYSPGNLGQVLDSIKKLEDAKGEEEKKAIDELRDVILPKELTVTGIFETGHYLHDSE
                     FLLVPVYVGQELYGLNDALHGITVKTDDPYGAERVKQEIQQSLEPPQYAQTWIDMNRQ
                     YFEAVRLERTVMFFLLFFIVIVAAFGIMSTLITVTVQKRHEIGIVKALGANIAQIVWV
                     FLGQGTIVGLFGTITGLGLGMTLIRYRNEFSRWLASTFHIEIFPRQVYQFSSIPAEVI
                     PHDVAIICISAFLICSFAALIPAYFAARLDPVKALRYE"
     gene            complement(3718..4224)
                     /locus_tag="VIS53_10055"
     CDS             complement(3718..4224)
                     /locus_tag="VIS53_10055"
                     /inference="COORDINATES: protein motif:HMM:NF024106.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative molybdenum carrier protein"
                     /protein_id="HEY5768167.1"
                     /translation="MPIARDRRSETAATVKALKIISGGQTGVDRAALDVALRHGIKCG
                     GWCPAGRLDEFGKIPDHYPVQELQRGGFTERTLQNVKDSDGTVVIYPVELRGGTKQTI
                     RFCIELKRPYQLIDASKISAERASELIADFVCDNRIGILNVAGPRQSEWPEGYEYASR
                     ALSAFLKL"
BASE COUNT          966 a         1159 c         1170 g         1003 t
ORIGIN      
        1 atccttagtc gtcgtttcgt ttcttaaagc gatggcaaaa ggaatgttgc gtatcgctgc
       61 gaccgcggat cttcattatg ccaagcattc gcgcggaatg atgcaggaag cgtttgccga
      121 gatttcgggg agcgcagacg tgctgttgct ctgcggcgac ctcaccgagt acgggctccc
      181 cgaagaagcg gaagaactcg ccgccgacat ccgcagcgcg gtgagaattc cgtgtatcgg
      241 cgtcattggt aatcatgatt atgaatccgg acacccggaa acggtcgcga acattctcga
      301 tcagaccggc gtgaccatgc tcaacgggga agccgtcgaa atcgccggtg ttggattcgc
      361 ggggatctgc gggttcggcg gcggtttcgg ccggcgcatg ctgaacgcgt ggggtgagcc
      421 actaattaaa caattcgtgc aggaatcaat cagccacgcc attcgcctcg agcaggccct
      481 ggtcaagttg caaactgagc gccgaatagt ggttctgcat tattccccaa ttcgagagac
      541 gttgcaggga gaagatcctg aaatctacgc ctttctcggg tctagtcgtc tcgaagaacc
      601 gatcaaccga tttcggtcca ccgcagtatt tcacggtcac gcacacaacg ggcttaccga
      661 tgggaaaacg tcaactggca ttcccgttta caacgtttcc gcgccagtac tgcacaaaac
      721 cggaaagccc tatcgaattg tggaactgta ggatgtctgt gtcagacgcg atcgccagac
      781 aaagaagctg ctgcaacaac atgccaggcc tcaacgtctg cgccggactc gataggcgaa
      841 acgcagcgca cagctttaat tgcgtcgaaa gtcacttcgg aaaacggaac ggtgattgaa
      901 gctgccagtt cgcaccgggt tgcagctgcc aagttcttgt acagcaaact caagtgtggt
      961 tttagttcgt actgtgacga atagttcgcc gcctcgcgaa tgatgccatt gattttcgac
     1021 aattctgcgc tcatgccgaa ttgcacaaag agcgttttga taaactcagc ggattgatcg
     1081 actccaagcg gttttagccc gatgagtttg cagttgcgcg ccgcgtcccc gagcgccttc
     1141 ttagccgtat cagcacgatc cgctccgaca tgaatcgtca cgtgcggctc aaaagcaggc
     1201 gcatcgcatc gacggacgag atcgttgatg attcgctgaa agaagctgtg tgccggttcg
     1261 gacgggataa gccagtacgc aatgacggtt tccctggtca tgagagcact acgggttcct
     1321 gttcaactcc acttctgcag ctcgacaatg ttaccttcgg gatcgcgcgc ataaaccaca
     1381 cgaagcagac cgacgccttt tacttccgcc gtggcaattt ctcccactgt gccaccgccg
     1441 gctgcgatca ctgcttgtag cgcttcatcc acgttttcca ccgcgaacgc aatgtggccg
     1501 aacccgcact cgttagcttt cggcaatcca cgttcgatca actgatcgta gctgaagatc
     1561 tccagcgtag gcccatcatc gtcgtatcca ggtaacctga gatgaacgcc atgaagccgg
     1621 gcgttcggaa ccgaattcac tctgtcaagc catgccgcgg acaagtcacg ttcgggacct
     1681 ttgggttcgc atccgaacac ctctttatag aatcggacca gccttttcca atctctggct
     1741 atcagattgg tgtgtacgta tttcgcacgg attggcattc ttttctcctt gaccaggctt
     1801 acaagtatca caatccatct gccagtgtca ttttgagcca agcgaagaat ctctgatcgt
     1861 ttctggatcg ctcggttgga aaaattgaga tgtttcgctt cgctcaacat gacagcagga
     1921 agaattggct gaacttgcgg tatgccgacg aatgttttgg gaacggaatt gaaatgttgt
     1981 tgtcgcgatc cgatgaccgg cttttatcgc gacggctatt gtcgaacagg accagaggac
     2041 gtggggcagc acacggtttg cgtgcaagtc acggaggaat ttttggattt ctccgtcctt
     2101 gatggaaacg acctggtcac gccgcatccg gagtggggtt ttcccggatt gaagccaggc
     2161 gacaggtggt gtgtgtgcgt cacgcgctgg aaaagcgcgc tggatcacaa ccgcgcggcg
     2221 cctgtggatc tggaagcaac gcatgcttct gcgctcgagt tcgtcacgct ggaagaacta
     2281 aaggcgcacg cggtaacgca agcctaacaa aacctgcaga ccggccgcgg ttgaatccca
     2341 ttgagtttgc cgccacgcta aggacgaatt gaagcttcct tttagtcttt tcctggcgct
     2401 gcggtatttg aaaccgaagc gtacatttct ctccatcatc acattgatct cggtcattgg
     2461 cgtgatgctc ggcgtgaccg tgctgattct tgtgattgcg gtcatgaccg gattcgatcg
     2521 ggaactgcgt cagaaggtca tcgatttcga tgcgcacatt ctggtcaatt ccgaggacgt
     2581 gttccgcgac tggcgagcgc tcaaggccaa aattgataaa acgccgggcg tggtcgccac
     2641 ggcccctttt gtgcaaggac cagtgattgt ggaattccac aaccggcggc tcgcaccgct
     2701 gattcgcggt atcgatcccg agcaggaaga gaaagtcatt ccactccaaa agttcatcaa
     2761 attgggcaag ctcgatctgg aaggagaatc cacggtgctt gggatcgaac tggcgcgaaa
     2821 actcggagtc aggatcggcg acaaggtgac aatttattcg cccggcaatc tcggccaggt
     2881 cctcgacagc attaagaaat tggaggacgc gaagggcgaa gaagagaaaa aagccatcga
     2941 tgaattgcgc gatgtgattc ttccgaaaga actgactgtc accggcattt ttgagaccgg
     3001 ccattattta cacgactccg aatttctgct cgtgcccgtt tacgtcggcc aggagctata
     3061 cggtctgaac gacgcgttgc acggaatcac ggtgaagacc gacgaccctt acggcgccga
     3121 acgcgtgaaa caggagatcc agcaatccct cgagccgccg cagtacgccc agacctggat
     3181 cgatatgaat cgccaatatt tcgaagcggt gcggctggaa cgcacggtga tgttttttct
     3241 tttgttcttc atcgtgatcg tggcggcttt tggaatcatg agcacgctca tcaccgtaac
     3301 ggtacaaaag cgacacgaga tcggaattgt gaaagcgctc ggggcgaaca ttgcgcaaat
     3361 tgtctgggtc ttccttggtc agggaacaat tgtcggcctt ttcggaacga tcactggctt
     3421 gggccttggg atgacgttga tccgctaccg gaacgagttt agtcgctggc tggcatcgac
     3481 gttccatatc gagattttcc cgcgccaagt ctatcaattc tcgtcgatcc cggctgaagt
     3541 cattccgcac gatgttgcta tcatctgtat cagcgccttc ttaatctgtt cgttcgcagc
     3601 gctgatccct gcgtacttcg ccgcgcggct cgatccggtg aaagctctgc gttacgagtg
     3661 acgttgtaga ggcgcttgtc caagcgcctt tgtattcggc gtttgacaca aacgccgcta
     3721 caacttgaga aaagcactca gcgcgcgaga agcgtactcg taaccttccg gccattcgct
     3781 ttggcgcggg ccagctacat tcaggatgcc gatcctatta tcgcagacaa aatcggcaat
     3841 cagctcagag gcacgttcag cggaaatctt cgatgcatcg atcaattggt atggccgctt
     3901 tagctcgata cagaaacgaa tagtttgctt agtgccgccg cgaagctcta ccgggtaaat
     3961 gacaacggtt ccatcagaat ctttcacatt ctgcaacgtg cgttcggtga aaccgccgcg
     4021 ttgtaattcc tgaactgggt agtgatccgg aattttgccg aattcatcga gtcgtccggc
     4081 cggacaccat ccgccgcact tgatcccatg cctcagcgcg acgtcgagcg cggcgcgatc
     4141 aacgcctgtt tgcccgcccg agatgatctt gagtgccttc actgtagcgg cggtctctga
     4201 ccgccgatca cgcgcgatcg gcatttagtc gccggttgga acaatgtcag cacgctcgat
     4261 catgaggatc accgttcgtt cgggcgcgcg tgtacgat
//
LOCUS       DATDAJ010000406         5634 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2350364, whole genome shotgun sequence.
ACCESSION   DATDAJ010000406 DATDAJ010000000
VERSION     DATDAJ010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5634
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2350364"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VIS53_10060"
     CDS             <1..394
                     /locus_tag="VIS53_10060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768168.1"
                     /translation="TTDAIGEQVIEAVVAGPEGANRLFTISGAANVCIEATRQQRTTE
                     TWTFLVGPPLTRLQFHRAIGTASVASQIVSVQNTPREFTVNIHSVEADWDDENQRVNV
                     RVEIGLIANGATVTITQIRYWVAILAQM"
     gene            1003..2289
                     /locus_tag="VIS53_10065"
     CDS             1003..2289
                     /locus_tag="VIS53_10065"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY5768169.1"
                     /translation="MPQFTYRARNAQGGLVEGVLDCADRAIAIHQIESQHCIPIRIDM
                     VEAAKPAVAKVSKPHALQRKLRLLSSPEAATPSQSLKIPHGQLLIFTEQLAHLLQAGM
                     TLDEGLSVLGKRLKHPRVEQMTHTLHQALIDGRSFSQALSDMPRIFPPLFVNLVAAGE
                     ASGALPQILLRLVKHLMQAKELRDRVQQALIYPAFLALAGAILVTIFITFMVPQLTGF
                     MAQTGGALPLPTRMLLHVHHAITGYWWLGILILVAGIIGFRAMVRTQEGRIGWDRFRL
                     LIPGYGGVIRHRYYAQFARTLGTLMENGVPLLRSLDLVTEIAGNRFLEVKLGEVRGAV
                     IDGATLSAALQQQKLFPDLFTDMMAVGEQTGHFAETMQAIADVYERELDRSVGVISQL
                     IPPVIIVIIAALVGLVVFSILSAVFEMTHSLQVRPR"
     gene            2485..3399
                     /locus_tag="VIS53_10070"
     CDS             2485..3399
                     /locus_tag="VIS53_10070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768170.1"
                     /translation="MSRNSKTQEAPAWVEALSLLPGELTEGGSAAKSIFRIRVTQPGP
                     DYQILFFRLFFDDKPNQQPELVAWDESGSHILRSGTLGVGMNLPSSDSVLIPMTGASA
                     IDIEVPGDGKTIRAAYLDWMTVSEVVHPVNAERRDVIPEPFSVVPPLHPPPEDVENFG
                     TVTATLAAEAIQLDARTQQNAVFQFPIEAQPLTALLTFELANPRIDAPPEVNVNGQNI
                     GPVGLTLPDLADPGYRGESEPLTTEMHFNYTGWLRAQKILPATILKVGANDLIITTGG
                     TGASAIRATQVQLKYIWDKSDYLLRTGN"
     gene            3542..3961
                     /gene="gspG"
                     /locus_tag="VIS53_10075"
     CDS             3542..3961
                     /gene="gspG"
                     /locus_tag="VIS53_10075"
                     /inference="COORDINATES: protein motif:HMM:TIGR01710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HEY5768171.1"
                     /translation="MRTKRKQQGFTLLEIMLVVSIIVIILGVAISKLGNTTGIAKSMR
                     VQADVQAIKTQLQLYESMNGFFPTTDQGLQALVSQPQNDPRPTRWYQLFKEMPKDPWG
                     SDYIYRDPGLKNPSGYDLYSAGPDRQPDTSDDDWGGG"
     gene            complement(4023..4667)
                     /locus_tag="VIS53_10080"
     CDS             complement(4023..4667)
                     /locus_tag="VIS53_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768172.1"
                     /translation="MKYSLTLATIIAMAGATYSQAEDVLPPQYNFDRYSKMMDQSPFA
                     IASAVAAPAATPDFAKDLYIANAARSQDGDLVTLASTADHNFKKYLSTREPVDGYSIG
                     SIEWSDKVGQTKVTISKDGNFATLTFNQALLSQASPGGGVPGRPVPAAAMPVPNPAGA
                     PNTHAPKLPPNVPAELQQLIPSRDSMQPRTRGMIQRSPRATKGSGGGTDASPKQ"
     gene            complement(4686..5237)
                     /locus_tag="VIS53_10085"
     CDS             complement(4686..5237)
                     /locus_tag="VIS53_10085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768173.1"
                     /translation="MMPAWYQRMNPRERVLSWIVAGTVAVLLNLWILSSLWGAVASAQ
                     KEFGARKSKLAEQAVYVKERDTWTKRDEWMRQHQPALKDPAEASALLDQVREVAGKYN
                     ILIENPAIGTGETTPNHQTVFASIETKSPWPPLVHFLYDVQRPEAFVVFENVNLAIDG
                     NDPTMMRGKFKIARWFAPGQKGK"
     gene            complement(5234..>5634)
                     /locus_tag="VIS53_10090"
     CDS             complement(5234..>5634)
                     /locus_tag="VIS53_10090"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEY5768174.1"
                     /translation="LVLLFAYLGLLRFQLGRLDRRIARDTPGTEFVRATEAKWKALAP
                     AIDPHYYPVEILQHLFESLPSADVRITSYNQSARQISVDGEANTAALAYEFIDKIKKN
                     PELRTFQFDMAAPRILPNNHAQFRLEGKPK"
BASE COUNT         1261 a         1557 c         1548 g         1268 t
ORIGIN      
        1 cacaaccgac gcgattggag agcaagttat agaagcagtt gtagccggac cagagggagc
       61 aaatcgactc ttcaccatta gtggtgcagc caacgtctgt atcgaggcga cgcgtcagca
      121 gcgtaccacc gagacgtgga cttttctggt gggaccacct cttacgcgct tgcagtttca
      181 tcgggcaatc ggcacggctt cagtagcttc gcagatcgta agcgtacaaa acacgccgcg
      241 ggagttcacg gtcaatatcc actcggtcga ggccgactgg gacgatgaaa atcaaagggt
      301 caacgtgcgt gttgaaatcg gtctcatagc gaatggggcc accgtgacga ttacccaaat
      361 ccgctattgg gtcgcgatcc tggcacagat gtgaatgggc gcgtattcct gttccaacta
      421 gcgaaattct acgccttcca cgcgacgctg tgattcgcgg gtacgatgaa acgagcaacc
      481 tgatccaaaa cgcacgagca cacgggagat caaaccaggt ctgaaaaggt tcaggcggcc
      541 gttcgccgag gcaagaaagg catgccccgt ctaatcaaca tcttgggact acaccaaagc
      601 ctttcactga caaaaatccc ggcaacagag gtgagaaagc tcctgttacg caggcgagtg
      661 cctgcgtgtt gcggctgata cagcccttac ttaggcgcta tagcaggcgc ttgttttgta
      721 gaatgctgga tagaaccctt ccctatcgcg atcgcttcgg cgccaaatgg cgggctggct
      781 ttcgcaggaa agagcggtcg taagactgcg aacgcttgcg aagcgaacgc aatggagacc
      841 accatcactg ctgcacatct catggtcggc gtgcttatca ggttccgaca gcatgacaag
      901 taaaattttt tcctaggtga tttggaattc attaaatttg ttcagaggcg aagccagatt
      961 ccagttttgc gatttatgct ttccgattac ttttcggcgc cgatgccaca gtttacttat
     1021 cgcgcgcgca acgcgcaggg cggtttagtt gaaggggtcc tagactgcgc agatcgcgcc
     1081 attgcgatcc accagattga atcgcaacac tgcatcccga ttcggatcga tatggtagaa
     1141 gcggctaagc ctgcagtagc aaaagtaagc aagccgcacg cacttcaacg gaaattgcga
     1201 ctactgagct cgcccgaagc cgccacgcct tcgcaaagcc tgaaaattcc gcacggccaa
     1261 ctgctcattt tcactgagca gctcgcgcat ttgctacaag ccggcatgac gctggacgaa
     1321 ggattgtcgg ttttggggaa acggttgaaa catccgcgcg tcgaacaaat gacgcacacg
     1381 ctgcatcagg ccctgatcga cggccgcagt ttttcgcagg ctttgagcga catgcctcga
     1441 attttcccgc cgctctttgt gaacctggtc gctgcgggcg aggctagcgg tgcgttacct
     1501 caaattctgc tgcgcttggt gaaacatctg atgcaggcaa aggaattgcg agaccgcgtg
     1561 caacaggcgt tgatttatcc ggcattcctc gcgctggccg gcgctattct cgtcacaatt
     1621 ttcatcactt tcatggtgcc gcagttgacc gggttcatgg cgcaaaccgg cggcgccctt
     1681 cccttgccga cgcgcatgtt gctgcacgtc caccatgcga tcaccggcta ctggtggctc
     1741 ggcatactga tactggttgc tggaattatc ggtttccgcg ctatggttcg aactcaggaa
     1801 ggacggatcg gatgggaccg gttccggttg ctgatccctg gttacggagg agtgatccgt
     1861 caccgttatt acgcgcagtt tgcacgtacg ctggggactt taatggaaaa cggcgtgcct
     1921 ttgctgcgct cactcgatct cgtgaccgag atagcgggca accgttttct cgaagtgaaa
     1981 cttggcgagg tgcgcggagc ggtcatcgac ggcgcgacgc tctcggctgc gttgcaacag
     2041 cagaagctct ttccggattt gtttactgac atgatggccg tgggcgaaca aaccggccac
     2101 ttcgccgaaa cgatgcaagc gatcgcggac gtgtatgagc gcgagcttga tcgatccgtc
     2161 ggggtgattt cgcaattgat tccgccggtc atcatcgtga tcatcgccgc gctggtaggc
     2221 ttagttgtat tcagtatcct gtcggcggtc tttgaaatga cgcacagctt acaagttaga
     2281 ccgcgttaaa ctcaaaactt gcaaagcagg ccgggtctga atagtttcgc ccactcaatg
     2341 ttaccccgcg ttgcgtttgc gatctttttg gctgcggttt gccgcgtaag cgcgcaagaa
     2401 gcattgaccg acgctctgcc agctccgcct gcggcgattg cggagccact cccgtcaagc
     2461 gcatggttag atctgcggca gaccatgtcg cgcaattcga aaacgcaaga ggctccagcc
     2521 tgggtcgaag cactctcgct tttacccggc gaactcaccg aaggcggtag cgcagcgaaa
     2581 agcatttttc gcattcgagt gacacaaccc ggtcccgatt atcaaatcct tttcttccga
     2641 ttattctttg acgacaaacc gaatcagcag ccggaattag tggcgtggga cgaatcaggc
     2701 agccacattt tgcgctcggg cacgctcggc gttggaatga atctgccgag ctccgattca
     2761 gtcctcatcc cgatgaccgg cgcctcggcg atcgatatcg aagttcccgg cgatggaaag
     2821 acgattcgcg cggcgtatct cgactggatg accgtcagtg aggtcgttca tccggtgaac
     2881 gctgaacgcc gcgatgtcat tccggagccg ttctcagtgg tgcctccgct gcacccgcca
     2941 ccggaagacg tcgagaactt cggaacggta actgccaccc tggcggccga agcaattcag
     3001 cttgatgcgc ggacgcagca aaacgccgtg ttccaatttc cgattgaagc gcaaccgctc
     3061 accgcgcttt taacttttga actcgcaaac ccgcgcatcg acgcgccgcc ggaagtcaat
     3121 gtcaatggcc agaacatcgg gccagttggg ctcacgctgc cggacctcgc tgatcctggt
     3181 taccgaggcg aatccgagcc ccttacgact gagatgcatt tcaactacac ggggtggctg
     3241 cgcgctcaga aaattttgcc agcaacaatc ttgaaagtgg gtgcgaacga tctgatcatc
     3301 accaccggag gtaccggcgc ctccgcaatc cgagcgacgc aagtccagct aaagtacatc
     3361 tgggacaagt cggattatct tctccgcacc ggcaattgaa cttctgtgac agtaaagctg
     3421 tcacattgaa tgaaccgaaa tattgagtgc gttgcgtcgg cgttgaccag atgcagatag
     3481 caattattga agatcacggt agtatagtcg cgcacgggac ggaaggtccc cctttattga
     3541 gatgagaacg aaaagaaaac agcagggctt cacgctattg gaaatcatgc tcgttgtgag
     3601 catcatcgtg attattctgg gagtcgcgat ttcaaaactc gggaacacga ctggcatcgc
     3661 caaaagcatg cgcgttcaag cggacgtcca ggcgatcaag acgcaactgc aattgtacga
     3721 gagtatgaac ggcttttttc cgaccacaga ccagggtttg caggcgctgg tgagccagcc
     3781 acaaaacgat ccgcgaccca ctcgctggta tcagttgttt aaggaaatgc ctaaagatcc
     3841 ctggggcagc gattacatct accgcgatcc tggtctgaaa aaccccagcg gctacgatct
     3901 gtattccgca ggacccgacc gtcagcctga tacttcagac gacgattggg gtggcggcta
     3961 gcattgccgc tcccggtctg aacttcgtct ggaagggaag cccgcagagc agtgtctaca
     4021 ggctactgct tgggagatgc atcagtcccc ccaccggatc ccttggtcgc tcgtgggctc
     4081 cgctgaatca tgccacgtgt acgcggctgc atcgagtccc gcgaaggaat taactgttgt
     4141 aattccgccg gcacgttggg gggcaatttt ggtgcatgtg tgttcggcgc gccggcggga
     4201 tttggaaccg gcatcgccgc agcgggcaca ggcctacctg ggacaccgcc acccggcgac
     4261 gcttgcgaca gtagcgcttg attgaaggta agcgtcgcaa aatttccgtc cttgctgatc
     4321 gtcaccttcg tctggcccac tttgtcggac cattcgatgc tgccgatgct ataaccgtcc
     4381 acgggttccc ttgtactaag atattttttg aagttgtgat ctgctgtgga agcaagcgtc
     4441 actagatcgc cgtcctgcga tcgcgcggcg ttagcgatgt aaaggtcctt tgcgaaatct
     4501 ggagtcgcag caggcgccgc cacggcagag gcaatcgcga atggtgattg atccatcatt
     4561 tttgagtagc gatcgaagtt gtactgcggc ggaagaacat cctcggcctg gctgtaagtt
     4621 gcgccggcca tcgcgatgat cgttgcgagc gtgagagaat atttcataac ttcagttctt
     4681 atttattact ttcccttttg ccccggcgca aaccagcggg cgatcttaaa tttgcctcgc
     4741 atcattgtgg gatcgttccc atcaatcgcg agattaacat tttcgaaaac cacgaacgcc
     4801 tccggccgtt gcacgtcgta aagaaaatgg accagaggag gccacggact tttggtttcg
     4861 atcgaagcga aaaccgtctg atgattcggg gtggtctcgc ctgttccgat cgcaggattt
     4921 tcaatgagga tattgtattt gccggcgact tccctgactt gatcaagcag cgcagaggct
     4981 tccgctggat ctttgagcgc cggctgatgt tgccgcatcc actcgtcgcg cttcgtccaa
     5041 gtgtcgcgct ctttcacgta aacagcttgc tcggccagtt tacttttccg ggcgccaaac
     5101 tccttttgcg cgctcgcgac tgcgccccag agcgaactca aaatccaaag attgagcagc
     5161 acagcgaccg tccctgcgac aatccacgag aggacacgct cacgcgggtt cattcgttga
     5221 taccaagccg gcatcatttc ggtttcccct ccaggcgaaa ttgcgcgtga ttgttaggca
     5281 aaatcctcgg cgcagccata tcaaattgaa acgttcgcaa ctccgggttc tttttgatct
     5341 tgtcgatgaa ctcgtaagcc agcgcagccg tgttcgcctc tccgtccacg gaaatctgac
     5401 gcgccgattg attatatgaa gtgatgcgta cgtcggcaga aggcaggctt tcgaacaaat
     5461 gctgcagaat ttcgactggg taataatgcg gatcgatcgc cggtgcgagt gctttccatt
     5521 ttgcttcggt cgcgcgtacg aactccgtcc caggcgtgtc tcgcgcaatg cgacgatcga
     5581 gccgtcccaa ctgaaaccgc aacagcccca gataagcgaa cagcaaaacc agga
//
LOCUS       DATDAJ010000407         3577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2351278, whole genome shotgun sequence.
ACCESSION   DATDAJ010000407 DATDAJ010000000
VERSION     DATDAJ010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2351278"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VIS53_10095"
     CDS             <1..1018
                     /locus_tag="VIS53_10095"
                     /inference="COORDINATES: protein motif:HMM:NF025930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEY5768175.1"
                     /translation="QINQAISSFALYGFPESHAISFAILAYGSAYLKVHRAPEFYASL
                     INNQPMGFYTPATIVKDAQRHGLKIKPVCVSQSDWRCTIVDDNTFRLGLCVVNGLRQE
                     HGEQIERERKNRRFESLDDFKGRVALAKSELRILAELGALNCFAEHLRAAMWRVEETL
                     HDDLLENAGASPAVSRASRDTLFFGEGAEKGWRGARAPLMPMTLPERVKADYETMNLT
                     TGPHPMKLLREKLPNIWRAIDLVRARHGATIQIAGNVICRQRPGTAKGFVFISLEDET
                     GVSNAIVDPDSFERFRLVITEEAFLLIEGEAQNSDGVVLIKARDIKPLVHERLVGSES
                     HDFH"
     gene            complement(1059..>3577)
                     /locus_tag="VIS53_10100"
     CDS             complement(1059..>3577)
                     /locus_tag="VIS53_10100"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEY5768176.1"
                     /translation="SRGYGVAGEARMTNFERMRNHSNSSHRHIVTSFSRFNDSTIQRF
                     NAAKLFLIFVLFVTAVATAFAQKRPITEKDLWDFVWIGDPQVSPDAARVAFVRVTVNE
                     KKEGYNSSIWSVPVAGGEAPRQLTKGDHDTTPRWSPDGKFLLFLRATEKDGKPEPPQL
                     AMLPMAGGDSFIFTDLRRGAGSPVWAPDGKNIAFASDINAEDLAKQEKKKSEEQTKKS
                     GAASDKPVPRSTPTATAPAGSMPPVTDEHESDVRVITRAVYRQDNEGYIDPKHPAHIW
                     IVTAPQSAEEKVKPRQLTTGRFDEDNAIWSKDGSQIYFTSSRIDEPYYELPRTDLYSV
                     PSAGGKPIKVTTIDLNTQFGPGGGALSLSPDGKQVAFVAATNQPINSYTEPDLWVLDL
                     SPDAKPRNLTADFDFDIDGFVIGDSSSPRAGGPNKPIWTPDGKALIAVYAKEGKRNLG
                     RFDATVAGDGSSAVAAGSAEAAAKAGSPNANSSAKSSPVQDLTSGNHGVMSFRATPDA
                     SKLVYVVSTPTRVNDLFVLDRATPGAIPKQLTNVNDELLSKLNLTEPEEIWYDSFDGK
                     RIQAWLQKPPGFDAHKKYPLILNIHGGPHVAYGYIFVHEFQWMAAKGYVVLYPNPRGS
                     TSYGQEFGNVIQYRYPGDDYRDLMAGVDEAIKRGYIDDKKLGVTGGSGGGLLTNWVVG
                     QTGRFAAAVSQRDIASWENWWYTGDFTLFQPNWFRAPPFEDPDEYRARSPISYMNNVK
                     TPMMFILGEIDYRTPPGAGGEQMFRALKFRKIPTVMVRFPNESHELSRSGQPWHRVER
                     LQHIVGWFDHWLMGVPKPEYEITSEEEVPVKPRQAEKPPK"
BASE COUNT          757 a          984 c          973 g          863 t
ORIGIN      
        1 ccagatcaat caggccatct cgtcgtttgc actttatggc tttcccgaat cgcatgcgat
       61 cagtttcgca attctggctt atggcagcgc ctatttaaaa gtgcatcgcg caccggaatt
      121 ttatgcaagc ctcattaaca atcagccgat ggggttttac acgccggcaa cgattgtgaa
      181 ggatgcccag cggcacggtc tcaagatcaa acccgtttgt gtgtcccaat ccgattggcg
      241 ctgcacgatt gtcgatgaca acacgtttcg gcttgggctg tgcgttgtaa atggattgcg
      301 ccaggaacat ggcgaacaaa tcgagcggga acgaaaaaat cgcagattcg agtcgctgga
      361 cgatttcaaa gggcgcgtcg ccctcgcgaa aagtgaattg cgcattctgg ccgaactggg
      421 tgcgctaaat tgttttgccg aacatctgcg tgctgcgatg tggagggtgg aagaaacgct
      481 ccacgacgat ttgttggaga acgcgggcgc ctcgcccgct gtgtcacgcg cctcgcggga
      541 cactcttttt ttcggcgagg gcgccgaaaa gggctggcga ggtgcccgcg ctcccctgat
      601 gccgatgacg ctacccgaac gcgtgaaagc ggattacgaa accatgaatc tgacgactgg
      661 accgcatccc atgaaacttt tgcgggaaaa gttgccaaac atttggcgtg cgatcgatct
      721 tgttcgggcg cgacatggcg cgacgattca gatcgccggc aacgtcattt gccgtcagcg
      781 tcccggcaca gcgaaaggat ttgtttttat cagtcttgaa gacgaaaccg gcgtttccaa
      841 cgcaattgtg gatccagact cattcgaacg cttccggctg gtgatcaccg aagaagcctt
      901 tcttctcatc gaaggcgagg cgcagaattc agacggcgtt gtcttgataa aagcgcgaga
      961 tattaaaccg ctcgttcacg aaagactcgt cgggagtgaa tcgcacgatt tccactaagc
     1021 ttggatggcg tctgacacag acgccctaca gtgtaggatt acttgggagg tttttcggct
     1081 tggcgcggtt tcaccggcac ctcttcctcc gatgtaattt cgtattccgg ctttggaacg
     1141 cccatcagcc agtgatcaaa ccagccgaca atgtgctgca accgctcgac ccgatgccac
     1201 ggctggccgg agcgggaaag ctcgtgagac tcgttaggga aacgcaccat cacggttgga
     1261 atcttgcgga atttcaacgc acgaaacatt tgttcgccgc cggcgccggg cggcgtgcga
     1321 tagtctattt cgcctaggat aaacatcatc ggcgtcttca cattgttcat gtaactgatc
     1381 ggcgaccgcg cccgatactc gtccggatct tcgaatggcg gggctcgaaa ccaattcggc
     1441 tggaagagcg tgaaatctcc cgtgtaccac cagttttccc aactggcgat atcgcgctgt
     1501 gagacggctg cagcaaagcg tccagtttgt ccaaccaccc agttcgtcag caatccgccg
     1561 ccgcttccgc cggtgacacc aagttttttg tcgtcgatgt agcctcgttt tatcgcctca
     1621 tcgacgccgg ccatcagatc tctgtaatcg tcgcctggat aacgatattg aatcacgttg
     1681 ccaaattcct gaccgtaact cgtgctgccg cgcggattcg ggtaaagcac cacgtaaccc
     1741 ttcgccgcca tccactgaaa ttcatgaacg aaaatgtagc cgtaggccac gtgcggtccg
     1801 ccatggatgt tcagaattag cggatacttc ttgtgcgcgt cgaaaccagg cggcttttgc
     1861 aaccaagcct gtatgcgttt gccgtcgaaa ctgtcgtacc aaatttcttc cggttcggtg
     1921 agattcagtt tcgacaacag ctcgtcgttc acattcgtta actgctttgg tattgcacca
     1981 ggagttgccc gatcgagtac gaaaagatcg ttaacgcgag ttggcgtcga tacaacatag
     2041 accagcttcg aagcatcagg cgtcgcgcga aaactcatca cgccgtgatt tccggaagtg
     2101 agatcttgca ctgggctgct cttagcggag ctatttgcat tcggcgatcc agccttcgca
     2161 gctgcttcgg cggagccggc ggctacggcg gacgagccgt ctccggctac agttgcgtca
     2221 aaccgtccga gattccgttt tccttccttg gcatacaccg cgatgagcgc ttttccatcc
     2281 ggagtccaaa tcggtttgtt tggtccaccc gcccgcggcg aggagctgtc tccgataacg
     2341 aaaccatcga tatcgaaatc aaaatccgcg gtgaggttcc gtggtttcgc gtccggcgag
     2401 agatcgagga cccacagatc tggctctgta taggaattga tcggctgatt ggtcgctgcg
     2461 acaaatgcga cctgtttgcc gtccggactg agggacaacg cgcctccgcc cggtccgaat
     2521 tgcgtgttca gatcgattgt tgtgaccttg ataggtttgc cgccggcgga cggcacggag
     2581 tacagatccg ttctcggcag ttcgtaatac ggttcgtcaa tgcggctcga ggtgaaataa
     2641 atttgcgagc cgtccttcga ccaaatcgca ttatcttcat cgaagcggcc ggtagtgagc
     2701 tggcgcggtt tcactttctc ttcagcgctc tgtggcgcag tcacgatcca gatatgagcc
     2761 ggatgcttgg gatcgatgta accttcgttg tcttgtcgat acactgcgcg tgtaatcacg
     2821 cgcacgtcgc tctcgtgctc atccgtaacc gggggcattg atcccgcggg agctgtagcg
     2881 gttggggttg accgcggcac gggtttatcg ctagctgctc cagatttctt cgtctgttcc
     2941 tcacttttct tcttttcctg tttcgcaagg tcctcagcgt tgatatcgct tgcgaacgcg
     3001 atattttttc catccggcgc ccacaccgga ctgccagcgc ctctccgcaa atcggtaaaa
     3061 ataaaggaat cgccgccggc catcggcagc attgcaagct gtggcggttc aggcttgcca
     3121 tctttttcgg tcgcgcgcag gaacaacagg aattttccgt ccggcgacca gcgcggtgtc
     3181 gtgtcatgat cgccttttgt cagttgacgc ggcgcttcgc cacccgccac cggcaccgac
     3241 caaatggaac tgttatatcc ttctttcttt tcgttgacgg tgacgcgcac aaatgcaacg
     3301 cgtgcggcat ccggcgaaac ctgcggatca ccgatccaga caaaatccca gagatctttt
     3361 tcggtaatgg gacgcttctg cgcgaaggcg gtggcgacgg cagttacgaa aaggacaaaa
     3421 atgaggaata gcttcgccgc gttgaatcgt tgaatcgttg aatcgttaaa tcgtgagaaa
     3481 gatgtaacga tgtgacgatg tgacgaatta ctgtggtttc tcattctttc gaaattcgtc
     3541 attcgtgctt cgcctgccac gccgtagcct ctcgacg
//
LOCUS       DATDAJ010000408         5620 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2356817, whole genome shotgun sequence.
ACCESSION   DATDAJ010000408 DATDAJ010000000
VERSION     DATDAJ010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 5620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5620
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2356817"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VIS53_10105"
     CDS             <1..605
                     /locus_tag="VIS53_10105"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY5768177.1"
                     /translation="HLRNQLAQNEADLEPEIRRILFGKKEENVVATARPMTLQQRSAV
                     ASLTEPPVTKAAQVLWYQGKALELMAQFFFATKDPEFFCMRQKRLARERVDRVKEILT
                     RDLVNPPTLEMLGQEVGCSPFYLSRIFSREVGHTIPQYLRNVRMERAAELLRTGRYNV
                     TEAATEVGYSSLSHFSKAFCETIGCCPVLYPVAKNVLLDR"
     gene            671..2194
                     /gene="purH"
                     /locus_tag="VIS53_10110"
     CDS             671..2194
                     /gene="purH"
                     /locus_tag="VIS53_10110"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEY5768178.1"
                     /translation="MKIRRALISVSDKTGVAAFARALESHGVDIISTGGTAVLLKNEK
                     IPVREISSFTAFPEVLDGRVKTLHPRVHGGLLYKRGNTKHEAEARECGFDPIDLVAVN
                     LYPFEATVAKRGVTLAEAIENIDIGGPSMIRSAAKNYESVTVVVDPADYDVVLENIGK
                     HDGETTLKLRERLAIKAFNRTAEYDRVIANFLNKEQKTDASFSLSLPLAMRLRYGENP
                     HQDAALYGDFDKCFEKLQGKELSFNNILDISAATNLVAEFEAPTVAILKHTNPCGVGS
                     DPDLRKAWEKAFATDKQAPFGGIIVCNRPLTESLAKVISEIFSEVIIAPDFEIEARAV
                     LQKKKNLRLIRLLTPPKEARSTTDLRSVCGGVLVQHADVDGELTTNVVTKRRPTKAEL
                     NAMWFGWRVVKHVKSNAIVYAKADRTLGIGAGQMSRVDASRIAVWKANEGGLSLKGCA
                     VASDAFFPFPDGLIAAAEAGATCAIQPGGSVRDEEVIAVANERKMAMIFTGVRHFRH"
     gene            2372..3583
                     /locus_tag="VIS53_10115"
     CDS             2372..3583
                     /locus_tag="VIS53_10115"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY5768179.1"
                     /translation="MNRLARSVQSPRVLNIEDLRRKAKRRLPRVVFDYIDGGAEDEST
                     LRANYRAFEAVTLRPRCAVATPVCDLRTTVLGTSVSIPLILAPVGSCRLMFPRGEEAA
                     ARAAGEGGIICTLSTLSGCRLEDVAAASGGPVWYQLYLVGGRDCALGSIDRARKAGFS
                     ALVVTIDTPVAGFRERDLRNGAKELLTGKLGPMLPFVSQLFVRPRWLTAFLADGGLMK
                     FENVVIPGKGPMLYADITAALEQSVVTWDDLKWIRQAWNGPIVIKGIHTPEDARRAVD
                     MGADALVVSNHGGRQLDGVAPTLRVLPEVVAAVDDRIEVLLDGGIRRGSDIVKALCLG
                     ARAVMAGRAYAYGLGAAGGAGVSRAIDVLRADLVRTLKLLGCASVAELDETYVDVPRD
                     WLVKRSNEWLT"
     gene            complement(3636..3833)
                     /locus_tag="VIS53_10120"
     CDS             complement(3636..3833)
                     /locus_tag="VIS53_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768180.1"
                     /translation="MNSPKTGLRIASVFFGIFAIGHLLRLINQAQVTVGTQTIPMGLS
                     WIALIVAALLCVWLWRLASPR"
     gene            complement(3885..4403)
                     /locus_tag="VIS53_10125"
     CDS             complement(3885..4403)
                     /locus_tag="VIS53_10125"
                     /inference="COORDINATES: protein motif:HMM:NF025255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4203 domain-containing protein"
                     /protein_id="HEY5768181.1"
                     /translation="MHSSVTIVGVLIGVVILFFGRKLFWLCVAAVGFAVGVEIAPLLV
                     NEASSLLALLIALLFGVLGALLALFIQKVAIAVLGFLAGGKLATAIAAAFFVQYAQYS
                     TIIFIIGGIIGAILLLALFGWALIVVSSFIGAYLIESAIVLPPTGSTLVFIGLAIVGI
                     FVQAASFRRSAI"
     gene            complement(4599..4672)
                     /locus_tag="VIS53_10130"
     tRNA            complement(4599..4672)
                     /locus_tag="VIS53_10130"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4636..4638),aa:Pro,seq:cgg)
     gene            4978..5193
                     /locus_tag="VIS53_10135"
     CDS             4978..5193
                     /locus_tag="VIS53_10135"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY5768182.1"
                     /translation="MTTQLLQEAAQVIPNQQTLINVVSKRVRQLGLGHRPLVETTPRM
                     SLTDIALKEIIAGKLTYESLEGTTDGA"
     gene            5287..>5620
                     /gene="smpB"
                     /locus_tag="VIS53_10140"
     CDS             5287..>5620
                     /gene="smpB"
                     /locus_tag="VIS53_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006983994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEY5768183.1"
                     /translation="MAADSIINRKALRDYHIVDRYEAGIELKGSEVKSIRAGKANVSD
                     AFARIENGEAFLYNADIQPYERASHEIPTAKRIRKLLLHREEIDRLYGEAQVKGRALV
                     VLKLYWKNG"
BASE COUNT         1303 a         1518 c         1629 g         1170 t
ORIGIN      
        1 agcatttgcg caatcaactt gcgcagaatg aagccgacct tgaaccggag attcgccgca
       61 tccttttcgg gaagaaagag gagaatgtgg tcgctaccgc acgtccgatg accctgcagc
      121 aacgcagcgc cgtggcgagc ctgacggagc ccccggtcac caaagcggcg caagtcctct
      181 ggtaccaagg gaaggccttg gagcttatgg cgcagttttt ctttgcgacg aaggatcccg
      241 aattcttctg catgcgccag aagcggctgg cgcgcgagcg agtggaccgg gtgaaggaga
      301 ttctcacgcg tgatctggtg aatccgccga cgctggaaat gttggggcaa gaggtgggtt
      361 gtagcccgtt ttacttgagc agaatttttt cgcgcgaagt cgggcacaca attccgcaat
      421 acttgcggaa cgttcgcatg gaacgcgcgg ccgagttgtt gcgcaccggc cgttataacg
      481 tcaccgaagc cgcgacagaa gtgggctatt cgagcctgag tcatttcagc aaagcatttt
      541 gcgaaacaat cggctgctgc ccggtgctgt atcctgtggc caagaacgtc ctcctcgacc
      601 gctaacgcgt tgcctgaatc gtaattcgtg aatcgatgta acgatttagc gaatctcgat
      661 taacgtcttc atgaaaatcc gccgcgctct tatttccgtc tccgacaaaa ccggtgtcgc
      721 tgcgtttgct cgcgcgttgg aaagtcacgg cgtagacatc atttcgacag gtgggacggc
      781 ggtccttctg aaaaacgaaa aaattccggt gcgcgagatc tcgagtttca ccgcatttcc
      841 tgaagtgctc gatggccggg taaaaacttt gcatccgcgc gtgcatggcg gacttcttta
      901 caagcgcgga aacaccaaac acgaagcaga agcgcgtgaa tgcggttttg atccgatcga
      961 cctcgtcgcg gtcaatcttt atcctttcga agccacggtc gcgaagcgtg gcgtaactct
     1021 ggcggaagca attgagaaca tcgacatcgg tggcccgtcg atgattcgaa gcgctgcgaa
     1081 gaattatgaa tcggtcacgg tcgtcgttga tcccgcagac tatgacgtgg tgctcgaaaa
     1141 catcgggaaa cacgacggcg aaacaacgct gaaacttcga gagcgcctcg cgatcaaagc
     1201 ctttaacagg accgcggaat atgatcgggt gattgccaat ttcctgaaca aagagcagaa
     1261 aactgacgcc tccttttcac tttcgctgcc attagcgatg cgcttgcgtt acggtgaaaa
     1321 tccccaccaa gacgctgcgc tctatggcga tttcgacaaa tgcttcgaga agcttcaggg
     1381 caaggagctt tcgttcaaca acattctcga tataagcgcg gccacgaatt tggttgccga
     1441 atttgaagca ccgactgtgg cgatcctgaa gcatacgaat ccgtgtgggg tcggctccga
     1501 tccagatctg cgcaaggcgt gggagaaagc gtttgcgacg gataagcagg cgccctttgg
     1561 cgggattatc gtctgcaacc ggccgctgac cgagtcgctg gcaaaggtga tcagcgaaat
     1621 ttttagcgag gtgatcatcg ctcctgattt tgagatcgaa gcgcgcgccg ttctgcagaa
     1681 gaaaaaaaat ctgcggctga ttcggttatt gacaccgccg aaagaagcga gatcaactac
     1741 cgatctgcgt tcggtctgcg gcggagttct cgttcaacac gcagatgtcg atggcgagct
     1801 gacgacgaac gtcgtgacca agcggcggcc gacgaaggct gaattgaacg ccatgtggtt
     1861 cggttggcgc gtcgtcaaac atgtgaaatc aaacgctatc gtgtacgcca aggcggaccg
     1921 gacacttgga attggagccg gccagatgtc gcgcgtcgac gcttcgcgga ttgcggtttg
     1981 gaaagcgaac gaaggcgggc tttcgctcaa aggctgcgcg gtcgcgagcg acgctttctt
     2041 tccgttcccc gacggcctga tcgcggccgc cgaagctggc gcgacctgcg cgattcagcc
     2101 aggcggctcg gttcgcgacg aagaagtgat tgccgtggct aacgaacgca agatggcaat
     2161 gatcttcact ggcgtacgcc attttcggca ctagtaacac aggcttccag ccctttggtc
     2221 cgacatgcat cttgcttgtc ggttagtttt gcacttgcag gctaggatgc ctggctgacg
     2281 aatcaggcag gatgcctgag ttaccattcg cggattgcat cgcgctaaag ctaggtgtta
     2341 atggaactcg catgcgcttg cgcgcgactc tatgaatcgc ctcgctagat cggtccaatc
     2401 gccgcgcgtt ttgaacatag aggacctccg gcgaaaggca aagcggcggc tccctcgtgt
     2461 cgtattcgac tacatcgacg gcggtgccga ggacgaatcg acgttgcgcg caaactaccg
     2521 cgcgttcgaa gcggtgacac tgcggccgcg ctgcgcggtc gccacgccgg tgtgcgatct
     2581 acgcacgacc gtactcggca cttcggtatc tataccgctg atcctcgcgc cggtcgggag
     2641 ctgtcgctta atgtttccgc gcggtgaaga agcagccgcg cgcgccgccg gtgaaggagg
     2701 gatcatttgc acactttcga cgctttcggg gtgtcgactc gaagacgttg cagccgcatc
     2761 gggagggccg gtctggtatc aactttatct tgtcggcggg cgcgactgtg ctttgggcag
     2821 tatcgaccga gcgcgcaagg cgggcttttc ggccttagtg gtcacgatcg acacgccagt
     2881 cgcaggtttc agagaacgcg accttcggaa tggggcgaaa gaacttctta ctggaaaact
     2941 gggaccaatg ctgccgtttg tgagtcagct tttcgttagg ccacgctggc tgacggcttt
     3001 tctcgcggac ggcggcttaa tgaaatttga gaatgtcgtc atcccaggaa aagggccgat
     3061 gctgtatgcc gacatcaccg ctgcacttga gcaatcggtt gtgacttggg acgatctcaa
     3121 atggattcgc caggcatgga acgggcctat tgtgattaaa ggtatccaca cgccagagga
     3181 cgcaagacgc gcagtggaca tgggagccga tgcgttggtc gtgtccaacc atggcggccg
     3241 gcaactcgac ggcgtcgcgc cgactttgcg cgttttgcct gaagttgtgg cggcggtaga
     3301 cgatcgcatt gaggtcctgc tggacggtgg catccgccgc ggcagcgata ttgttaaagc
     3361 cctctgtctg ggagcccgcg ccgtaatggc cggacgcgcg tacgcctacg gactcggagc
     3421 ggcgggcggt gcgggtgttt cgcgcgcgat cgacgttttg cgcgcggatc tcgtgcgcac
     3481 gctcaagctg cttggctgtg cgtcagtcgc ggaactcgat gaaacttacg tcgatgttcc
     3541 gcgggactgg cttgtaaaac ggagcaatga atggctgacc tgaatcgtta agtcgttgat
     3601 tgatttccga ttcaacgaat caacgcctta aagattcaac gtggcgaagc caatcgccac
     3661 agccacacgc aaagaagagc agcgacgatc aacgcgatcc agctcaggcc cattgggatt
     3721 gtctgcgttc cgacggtgac ttgggcctgg ttgatcaacc gcagcagatg cccaattgca
     3781 aaaatgccaa agaaaacgct ggcaatgcgc aatccagttt ttggcgagtt cataaaccga
     3841 ttgttaaagt tgcgcggcga tttgtcagca gcaacacgcg tgctctatat cgcacttcgg
     3901 cggaacgatg ctgcctgcac gaatatgcct acgatcgcga ggccgatgaa cacgagtgtc
     3961 gaaccggtgg gcggcagcac aatggcgctt tcaatcaagt acgcgccgat aaacgaggag
     4021 acaacgatca gtgcccaccc aaatagcgcc agcagcagaa ttgccccaat aatgccgccg
     4081 ataatgaaga tgatggtcga gtattgcgca tactgcacaa agaacgcagc ggcgatcgcc
     4141 gtggcgagct ttccgcctgc taagaaaccg agcactgcaa tcgcaacttt ctgaatgaat
     4201 agtgcgagca acgctccaag gaccccgaag agtagagcaa ttaataacgc cagcagcgac
     4261 gaagcctcgt taaccagcaa cggcgcaatc tccactccga cagcgaatcc gactgcggca
     4321 acacacagcc aaaacagctt tcgcccaaag aacaaaatca ccacgccaat gagtacgcct
     4381 acgatcgtga cagaagaatg catggcaaaa ggcgtgttcc gacaattaca gtgtagaggc
     4441 gtttgtgcca aacgcctgtt tttttggaat tcccgtggtt gacacaagga ttgaggccga
     4501 gcgctgtagc gtgcgctgtc ccagcggagt aaatgaaggc tcgctgcaag cggcccaatg
     4561 cgctgaggac agcgcacact acaacaagac ggcagctatc gggctggtgg gatttgaacc
     4621 cacggcctcc tggtcccgaa ccaggcgcga taccaagctt cgctacagcc cgaaatgact
     4681 gatttgtccg cggacgcggg tccttacttc gcgcattttg atttaaatcg caaggacaag
     4741 tggcggcgtg agtgacttca gttaccgcgt ggtggcaggg acttccgccg cgtggctcaa
     4801 attactttgt gctcgtccgg acgaaaagcg ttgacaacga gccgcttcat ttggaaagtc
     4861 aacactcatt ttaccatgct cgcaccgcag cttattccct ccgcgcttac aagcagcgtg
     4921 tcgactatcc ttcaattccc gaccgaagcg gtccgccgcg ttcatttctt gcgccatatg
     4981 acgactcaac ttcttcagga agcagcacaa gtgatcccca atcagcaaac tctgattaat
     5041 gttgtctcca agcgtgtgcg tcagcttggc ttaggacatc ggccgctggt agagacgaca
     5101 ccgcgaatgt cgttaacgga tattgcgctg aaggaaatca tcgccggcaa actgacatac
     5161 gagtcgctcg aagggaccac ggacggcgcg tgagagttcc ggacgccgct tccaaatagg
     5221 ttctggcgtc tgacacagac gccctacaat ggagaccggt ggcgagaatc cgggatcgtt
     5281 ggcaatatgg cagccgattc catcatcaac cgcaaagcat tgcgggatta tcacatcgtt
     5341 gaccgctacg aagcgggcat cgaattgaag ggcagcgagg ttaaatcgat ccgcgcgggc
     5401 aaggccaatg tcagtgacgc attcgctcga atcgagaacg gcgaagcatt cctttacaat
     5461 gccgacattc agccctacga gcgtgccagc cacgaaattc caaccgcaaa acgcatacgc
     5521 aaattgttgc tccaccgcga ggagatcgac agactttacg gcgaagcgca agtgaaaggt
     5581 cgcgcgctcg tggtgttaaa gttgtattgg aaaaacggca
//
LOCUS       DATDAJ010000409         3470 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2366119, whole genome shotgun sequence.
ACCESSION   DATDAJ010000409 DATDAJ010000000
VERSION     DATDAJ010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2366119"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            439..864
                     /locus_tag="VIS53_10145"
     CDS             439..864
                     /locus_tag="VIS53_10145"
                     /inference="COORDINATES: protein motif:HMM:NF015953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY5768184.1"
                     /translation="MKQFVFRWAATTVAVMVASSIIHGIRYDTIAALIGASLLLGILN
                     AFVRPFLLILSAPVILLTLGLFILVLNGLLLLLVPSVVAGFHVDSFWSAFWGAIVISF
                     VSWVLSAFFRGSDGRVHVLTHHTETRRVRGRVLEDEEPR"
     gene            complement(880..1482)
                     /locus_tag="VIS53_10150"
     CDS             complement(880..1482)
                     /locus_tag="VIS53_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006978433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY5768185.1"
                     /translation="MSQNDRGNQGRSEEDADDVRLMQLVGQGNTQAFEQLIEKHQTLV
                     AGTVAHMLGSSSDVEDIAQQVFIRVWKSARRYVPRAKFTTWLLKITRNLVFNEMRRTK
                     RRPHVPLQSESGAEDPPLKDETNLAPDASLLESELQQAIEEAIQRLPDTQRMALVLRR
                     YQQLSYEQIAEVLDLSVPAVKSVLFRARTELRSRLSKYLD"
     gene            1622..2773
                     /gene="mqnE"
                     /locus_tag="VIS53_10155"
     CDS             1622..2773
                     /gene="mqnE"
                     /locus_tag="VIS53_10155"
                     /inference="COORDINATES: protein motif:HMM:TIGR03700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HEY5768186.1"
                     /translation="MNYQLIPKELRPIAEKVEAQQRISEGDALTLYGTNDLNALGIIA
                     NVVRERKNGNYATYIHNRYINYSNICILSCQFCAFAAKKRDAHAFEYAIEEIVQAVTD
                     ALPLGVTEVHMVGGLHPTLKKDWYLELLKRLRALDPQLHIKAFTAIEVRHLSQRVFKM
                     PIRDTLEILREAGLGSITGGGAEIFDPIVRDQICRGKETAAEWLDVHRTWHSMGGRST
                     CTMLYGHIETLAQRADHLCQLRQLQDETGGFTGFVPFAFEPTQSHSILADIKRASAFE
                     QLRNLAVSRIYLDNIDHLTAYWVSLGLPLAQVSLSYGVDDLHGTILEEKIFHMAGATT
                     PQQQTIAALEHAIREAGREPVQRDSHYRHISHRSDETHAAPASAELACA"
     gene            2898..>3470
                     /locus_tag="VIS53_10160"
     CDS             2898..>3470
                     /locus_tag="VIS53_10160"
                     /inference="COORDINATES: protein motif:HMM:NF014658.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis protein"
                     /protein_id="HEY5768187.1"
                     /translation="MNSLRVGCVKYLNARPLIRGWPGNVEFDHPSALCQRLTKGQLDV
                     ALVSSFEFLRNPIYRIVDDVSISSDGPVYSVVVAHRGAISEIEEIELDPASETAVNLL
                     RCLLGELGLTARLTGGVPGSAELPRARLIIGDQAIRFRQNHAGQFRFWDLGEQWKKLT
                     GLPFVYALWLIRPEVSDAKSIAQRLRGLRDK"
BASE COUNT          704 a          983 c          944 g          839 t
ORIGIN      
        1 tgaaatgtgt gaagtttgct cactcgcgcc ctttttcccg ctcggcttgc tcggcttttt
       61 cgccgtggtt gcatgtcgtg gcgtttggcg tttgccagcc ttttttgttg cagccggcgc
      121 gtctgagtct ggcgagggtc gatttatatt ttcggcagtt ttcgtttttt ttggcacagg
      181 tgttcagtgg ttaaatgatt tcaactcgtt tatcgttcat cggctcgttc gcaagtgctt
      241 tctcgccctt cgtcagacat cgcctacagt aatttaggct tccagtccgc cataagacgg
      301 actcgccgtg gcgagcctga cgggtcgtgc aggcttccca gcctgctcat tccccgacca
      361 gccaggatgc ccgttcgacg agacaggcaa gatgcctatg ttaggtgaca cgcggccaca
      421 tgaaaaatcc atagtagtat gaagcaattc gttttccgct gggctgcgac gacggttgca
      481 gtgatggtgg cctcgtccat cattcatggg attcgttacg acacaatcgc tgcgctcatt
      541 ggagcgtcac ttttactggg tattctcaac gcttttgtgc ggccgtttct gttgatcctc
      601 agcgcgccgg tcattcttct cacgctgggc ttgttcatcc tggttttgaa cggactcttg
      661 ctgcttctag tacccagtgt cgttgccgga tttcatgtag acagtttctg gagcgcattc
      721 tggggcgcga tcgtgatcag cttcgtcagc tgggttttga gcgcattttt ccgcgggagc
      781 gacggacgcg tacatgtgtt gacccatcac accgagacac gccgcgttcg aggtcgagtc
      841 cttgaggatg aggaaccgcg gtgagattgg atttgcggct taatcgaggt atttgctgag
      901 gcgggaacgg agctcagtcc gcgcgcgaaa aagtacgctt tttaccgccg gcaccgagag
      961 atcgagcacc tcggcgattt gttcgtagct gagttgttga tatctgcgca gtacgagcgc
     1021 catccgctgg gtgtccggga gccgctgaat cgcttcctcg atcgcctgct gcagttccga
     1081 ttccaaaagg gatgcgtccg gcgcgaggtt cgtttcatcc ttcaaaggcg gatcctctgc
     1141 gcctgactcc gattgcagcg gaacatgagg ccgacgcttg gtgcggcgca tctcattaaa
     1201 caccaggttg cgtgtaattt tcaaaagcca ggtcgtaaac ttggcgcgcg gaacatatcg
     1261 acgcgcactt ttccaaaccc ggataaagac ctgctgcgcg atgtcttcca cgtcagaact
     1321 gctgccgagc atgtgggcga ccgtgcccgc cactaaagtc tgatgcttct cgatgagctg
     1381 ttcaaatgcc tgagtattgc cctggccgac caactgcatc agccgcacgt catcagcatc
     1441 ttcttccgat ctgccctggt ttcctcgatc gttctgagac atcgtgattt agacgttggc
     1501 acacggcgaa acttgccaga aaaatgaagc tcggccatcc acaatcctcg tggccatcgt
     1561 ttttgttgca acccgctagc cctctgtgca tgcttcacgc gcgattaacc agcgtctgcc
     1621 gatgaactat cagctcattc cgaaagaact ccgaccgatc gcggagaagg tcgaggcgca
     1681 gcagcggatt tctgaaggcg atgctctgac gctttatgga acaaatgatc ttaacgccct
     1741 gggaatcatc gccaacgtgg tgcgagagcg aaagaacggc aattacgcga cctatatcca
     1801 caatcggtac atcaactact caaacatctg catcttatcc tgccagttct gcgcgtttgc
     1861 cgccaagaaa cgcgacgccc atgcattcga atacgcaatt gaagaaatcg ttcaggccgt
     1921 gacggatgcg ctccccctcg gggtcaccga ggtgcacatg gtcggcggat tgcatcccac
     1981 cttgaaaaaa gactggtatc tcgaactctt gaaaagacta cgggcgcttg atccgcagct
     2041 gcatataaag gcatttaccg ccatcgaagt ccgccatttg tcccagcgag tctttaagat
     2101 gccgattcga gatacgctgg aaattctgcg tgaagccggg cttggttcga tcaccggggg
     2161 tggcgccgag atcttcgatc cgattgtgcg cgaccaaatc tgccgcggaa aggaaaccgc
     2221 ggccgaatgg ctcgacgtgc atcgcacctg gcattcgatg ggcggccgca gcacatgcac
     2281 gatgctttac ggacacatcg aaacgcttgc tcaacgggct gatcacctgt gccaactgcg
     2341 gcaactgcag gatgagaccg gcgggttcac cgggtttgtt ccttttgcgt tcgagccgac
     2401 gcaatcccac agcatccttg ccgacatcaa gcgcgcctcc gcattcgaac aactacgcaa
     2461 tctcgcggtg agccgtattt acctcgacaa catcgatcac ctgacggcgt attgggtcag
     2521 cctcggattg cctctagcgc aggtctcgtt gagctacggc gtggacgatc ttcatggaac
     2581 aattctggag gaaaaaattt tccacatggc cggcgccacc acgccgcaac agcaaaccat
     2641 cgcagcgctt gaacacgcta tccgagaagc aggccgtgag cctgtccagc gcgacagtca
     2701 ttaccggcat atctcgcacc ggtcggatga gacgcacgcg gcgccagcgt ccgccgagct
     2761 tgcgtgcgcg tagcacttgc tgtcattccg accgaaatcg aggaaccccg ttgggaaacc
     2821 cacaggtacg tttgcgggat ccttcgactt cgctttgctc cgctcaggat gaccgcgatt
     2881 tttgatcacc tcctaaattg aactctctgc gcgtcggttg cgttaagtat ttaaacgctc
     2941 gtccgctcat ccgcgggtgg ccgggcaacg ttgaattcga ccatccgtcc gccttgtgtc
     3001 agcgactgac gaaagggcag ctcgacgtcg cgcttgtttc cagcttcgag tttctgcgca
     3061 acccgatcta tcgaatcgtt gacgacgttt ccatttcatc cgacggcccg gtttacagtg
     3121 tagtagtcgc gcaccgtggc gcgatttcgg aaattgagga gattgaactc gatccggcat
     3181 cggaaactgc ggtgaatctc ttgcgttgtc ttctcggaga gcttggattg accgctcgtt
     3241 tgaccggcgg tgttccggga agcgcagaat taccgcgcgc gcgcctcatc atcggcgatc
     3301 aagcgattag gttccggcaa aaccacgccg gtcaatttcg attctgggat cttggtgagc
     3361 aatggaagaa actgaccggg cttccgtttg tttacgcgct gtggctgatc cggcccgaag
     3421 tctccgatgc aaaatccatc gctcaacgcc tacgcggatt acgagacaaa
//
LOCUS       DATDAJ010000410         2182 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2368497, whole genome shotgun sequence.
ACCESSION   DATDAJ010000410 DATDAJ010000000
VERSION     DATDAJ010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2368497"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..432)
                     /locus_tag="VIS53_10165"
     CDS             complement(<1..432)
                     /locus_tag="VIS53_10165"
                     /inference="COORDINATES: protein motif:HMM:NF020279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly factor Coa1 family
                     protein"
                     /protein_id="HEY5768188.1"
                     /translation="MDQPLTQPATPRPNWWKRNWKWFVPLGCFTVVLLFLAFVGSILV
                     IVFSAMKSTDVYKEALARAKADPAVIEALGSPIKDGFLLSGNTNVNGASGESNLAIPI
                     SGPREKGQFTCPQPNHSGVGIIPASSLKSDTRMNASIFFKSR"
     gene            581..919
                     /locus_tag="VIS53_10170"
     CDS             581..919
                     /locus_tag="VIS53_10170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768189.1"
                     /translation="MIAGCETVPSSGPAALAGQWTNSLGTVWTINPDGTFHVAATKPK
                     AQIWGTYTVSGDTITVQETRQSGKVPKNCKGPGVYKFSRPDANTLAFALVNDVCKPRI
                     QNVTQPWHRQ"
     gene            complement(990..2159)
                     /locus_tag="VIS53_10175"
     CDS             complement(990..2159)
                     /locus_tag="VIS53_10175"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY5768190.1"
                     /translation="MSTTPATRPVIACYCATFLKPEMLHIYRQITGLKRCAPVVIAQK
                     RENATRFPFEPVHIVSKPRTHVLRRFWFRQLRDKPWQISDSELGELLSVLSETRARLL
                     HIYFGHIAVHLLPLIRAWKCPSIVSFHGADVMVDMNKPAYREATLQMLDAVTLVLVRS
                     ESLRRAVVDLGCEPKKIEIQRTGIPLEEFPFRDRAVPKNGEWQFVQAGRLIEKKGLPV
                     TLRAVSTFLKQHPNATLTIAGEGPLLPELQKFACELNIADRVSFTGFVSQEQLREIYY
                     RSHIFLHPSQTGRDGNQEGIPNSMLEAMATGLPVFATEHGGIPEAIENGVSGVLVPEG
                     DEEALARALLNAAQDPGLLSGIGHAGAEAVRQNFDSAAQVQRLEDIYLRMVGRED"
BASE COUNT          513 a          607 c          589 g          473 t
ORIGIN      
        1 ccgacttttg aagaagatcg atgcgttcat gcgtgtgtcc gacttcaacg acgaggccgg
       61 aataattcca acgcccgagt gatttggttg cggacacgta aattgtccct tttccctggg
      121 accggagatg ggaatcgcca ggttggattc accagacgcg ccgtttacgt ttgtgtttcc
      181 cgagaggaga aatccgtcct tgatcggcga accgagagct tcaattactg caggatcagc
      241 cttggcgcgg gccaatgcct ccttgtaaac atcggtcgat ttcatcgcgc tgaagacgat
      301 cacgagtatt gatccaacga acgccagaaa cagcagcacc acagtgaaac agcccagcgg
      361 cacgaaccat ttccagtttc gcttccacca gtttggcctt ggtgtcgcag gctgcgtcag
      421 cggttgatcc acgagcctct tctacttcag tgacgaagtt attagcaatg cattggttca
      481 agcgctccaa gcttgacggt ttcgatggtc gtcaggcacg atggcaggca tgaagcgaca
      541 acacactctt cgaattcttt ttgcagtgct cttagtagca atgatcgctg gatgcgaaac
      601 tgtcccgagc tccggcccgg ccgcgctcgc cgggcaatgg acaaactcac tgggcacggt
      661 ctggaccatc aatcccgatg gaacgtttca cgttgcagct acaaagccaa aggcacagat
      721 ctggggaacc tatacggttt ccggcgatac catcacagtt caggagactc gccagtcagg
      781 gaaagttccc aaaaattgca aaggccctgg cgtgtataag ttcagccggc cagacgcaaa
      841 cactttggcg ttcgcgttgg tgaatgacgt ctgcaagccc cggattcaaa acgtcacgca
      901 gccgtggcat cgccagtaaa ggcggcggaa ccccgaaagc tagaactaag gtaggggcgg
      961 ttcacctgaa ccgcctaggg cgattgaggt caatcttccc tacctaccat tcgaagataa
     1021 atgtcttcaa gtcgctgcac ttgggcagcc gaatcaaaat tctgtctcac tgcctcggcc
     1081 cccgcatgcc caatgcccga aagtaaaccg ggatcttgtg ctgcattgag cagcgctcgc
     1141 gctaacgctt cctcatcgcc ctctggcacg agtacgccgc tcacgccgtt ctcgattgcc
     1201 tcgggaatgc cgccgtgctc ggtggcaaac accggcagac ccgtggccat tgcttcgagc
     1261 atcgaatttg gaatgccttc ttgatttccg tcgcgaccag tctggctcgg gtgcagaaag
     1321 atgtgcgagc gataatagat ctcgcgcaat tgctcttgtg aaacgaaacc ggtgaacgag
     1381 acgcggtcag cgatatttaa ttcgcaggca aatttctgga gttcaggaag taaaggtcct
     1441 tcgccggcga tcgttaatgt ggcgtttggg tgttgcttca aaaaggttga gacagcgcga
     1501 agggttaccg gcaaaccttt cttctcgatt aatcggcccg cctgcacgaa ctgccattcc
     1561 ccgtttttcg gaacagcgcg gtcgcgaaag gggaattcct ccagcggaat tccggtgcgc
     1621 tggatctcaa tcttcttcgg ttcgcacccg agatcgacca cagcgcgccg cagcgattcc
     1681 gacctaacca gaaccagcgt tactgcatcc aacatctgca aagtcgcttc tcgataagcc
     1741 ggtttgttca tgtcgaccat gacgtcagcg ccatgaaagg aaacaattga aggacatttc
     1801 cacgcccgaa tgagcggcag gagatgcaca gcgatgtggc caaagtaaat gtgcaagaga
     1861 cgcgcgcgcg tttcacttag aacgctgagc aactcgccca gttccgagtc cgatatttgc
     1921 cacggcttat cgcgcaattg tcgaaaccaa aaccgccgga ggacatgcgt tcgcggcttg
     1981 gaaacgatgt gaacaggctc aaacggaaag cgcgtggcgt tttcgcgttt ctgcgcaatc
     2041 accaccggag cgcatcgttt cagaccagtg atttgccggt agatatgcag catctccggc
     2101 ttgagaaacg tcgcgcaata acaagcgatg accgggcgtg tggcgggcgt tgtactcaac
     2161 gcgcaagatt agacgctcag cg
//
LOCUS       DATDAJ010000411         4766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Candidatus Udaeobacter sp. isolate SMAG_U93
            k141_2375874, whole genome shotgun sequence.
ACCESSION   DATDAJ010000411 DATDAJ010000000
VERSION     DATDAJ010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962296
            Sequence Read Archive: SRR25158260
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Udaeobacter sp. (soil metagenome)
  ORGANISM  Candidatus Udaeobacter sp.
            Bacteria; Verrucomicrobiota; Spartobacteria; Chthoniobacterales;
            Chthoniobacteraceae; Candidatus Udaeobacter.
REFERENCE   1  (bases 1 to 4766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:42:10
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,041
            CDSs (total)                      :: 2,012
            Genes (coding)                    :: 2,004
            CDSs (with protein)               :: 2,004
            Genes (RNA)                       :: 29
            tRNAs                             :: 26
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 8
            CDSs (without protein)            :: 8
            Pseudo Genes (ambiguous residues) :: 0 of 8
            Pseudo Genes (frameshifted)       :: 0 of 8
            Pseudo Genes (incomplete)         :: 7 of 8
            Pseudo Genes (internal stop)      :: 1 of 8
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766
                     /organism="Candidatus Udaeobacter sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2375874"
                     /isolate="SMAG_U93"
                     /isolation_source="soil"
                     /db_xref="taxon:2665650"
                     /environmental_sample
                     /country="United Kingdom"
                     /lat_lon="53.47 N 2.23 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /locus_tag="VIS53_10180"
     CDS             complement(<1..796)
                     /locus_tag="VIS53_10180"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEY5768191.1"
                     /translation="MDITLLQRPLFYVGGHYITLLGLIAFVGFFGAGVIIARFLQSQI
                     VRRFFSRFKIDTNFIAIVTTILSLAAIVFFTVTAVNAAGIPLAWSAPLPAINLSLVQI
                     FLLIAVLVAVFWFSSGTKRFLFNRLLAPSGLDRSLQYAIAQVVSNIVLVVGIFFVLEN
                     AGIHLAALAVFAGAVGVGVGFGLQNITSNFISGLVILAERPITIGDRVEVAGIVGQVE
                     HIRARSTVIRTNDNIMMIVPNSKFIDSPVTNWTYGDPRVRFRIPVGV"
     gene            complement(885..1136)
                     /locus_tag="VIS53_10185"
     CDS             complement(885..1136)
                     /locus_tag="VIS53_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006979226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY5768192.1"
                     /translation="MAEKSIEEKVKDIIVEQLGVNPEQVTPQASFIEDLGADSLDIVE
                     LVMAFEEEFGVEVPDEDAEKLQTVGDVIKYIEEKSSKQQ"
     gene            1313..2788
                     /locus_tag="VIS53_10190"
     CDS             1313..2788
                     /locus_tag="VIS53_10190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768193.1"
                     /translation="MSALSVEPADLLDLKFLPAWVKEPGATNHYDHYTAEEAPTELRS
                     RDRGARHKDGAFRSRERRGQTRHPPSKPEGRHRGRTPKAEGTRRRDSDRGRNRRSPDR
                     LPQPTPKPFEGTIHFLPRQNVFENVVAQINSGSVAYSLFVLARLFLEKAGRYEVRLTA
                     KAESPLFQLGEGGEVSVEREFLERNAFRFAQRDFYQVNVVETDPIKGNFSNVARCRLS
                     GTLLGPTNHHAYQPQLRSLYEQRFSRRFSFADYQRQIEIVSDPAMVERWKEEARKITT
                     YTTVREQTPLTFSSAAEVERHFRSHYLPGLIRNVDDVTLGGTSSRSLPDRILNGAIEE
                     AWVRETRSPSNVMQELASRFRQNGLHVFRHRRGMLFVSSIRVRAFVHEHAGVSPLVNA
                     ILEAVSATAGINRKQLFETLTGNGAKEDGEPRRLALASDLRWLINEGYLIEFNDGSLD
                     RPRIKSKQGQKTVEALVPSALAVDVTVTTTQWPLQLTWREP"
     gene            complement(2827..3144)
                     /locus_tag="VIS53_10195"
     CDS             complement(2827..3144)
                     /locus_tag="VIS53_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bL28 family ribosomal protein"
                     /protein_id="HEY5768194.1"
                     /translation="MIRLTSKLKDARLRGFFRDMKVCHITGSRAVRGSVIHRRGLAKK
                     KGGVGRHITKMVPRIFAPNLRRQRIWVPELKKFVRVRVTARGLKTINKQGAYKALKKA
                     GAI"
     gene            3282..4319
                     /locus_tag="VIS53_10200"
     CDS             3282..4319
                     /locus_tag="VIS53_10200"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY5768195.1"
                     /translation="MDKNNHKLRIGIVGAGNIVRTRHLPGLKKNADVEIVAVSNSTYE
                     SSERFCRENSLAALPMRDWAELVATPDIDIVWIGTTPYMHSAVTISALEAGKHVFCQA
                     RMSMDLAEAEEMLAISKRYPELVTMLCPPPFGLRGDLMVKKILAESYIGQPHHVRLQS
                     FHGNYLDPDSPAHWRQKIEISGLNTLTLGIYIEVLQRWLGDITGVFARGKIVQPLREA
                     YNVIVPDLLTVLCSFESGAEGVLEFSGINALAEGDRLEIYGSNGTLTYDFTADVMQTG
                     KVGDRALHVVDVPTELEGEWRVEEDFLAAVKSKGRVLPHPNFEDGLRYMRVVQAVSDS
                     RVRNEWVAIKS"
     gene            complement(4335..>4766)
                     /locus_tag="VIS53_10205"
     CDS             complement(4335..>4766)
                     /locus_tag="VIS53_10205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY5768196.1"
                     /translation="LLLLVLQWWVTFKWNTEVIWSFDRFLVLIVWTITLYMLTVFLYP
                     PDLSEAEEHQRWFQRNRVGYYSAFIAMCVLDIAQTAIHGDLLHPIWYVPFVGHYAVLA
                     AIGLFAHRRGYDRFFAWYQLITLLIWALLVRRYLVPDTMAA"
BASE COUNT         1134 a         1295 c         1314 g         1023 t
ORIGIN      
        1 ctacccccac cggaatacga aagcgcaccc gcgggtcgcc atacgtccag ttggtaacgg
       61 gtgaatcgat gaatttcgag ttcggcacaa tcatcatgat gttgtcgtta gtccgaatga
      121 ccgtgctgcg cgcgcgaatg tgctccacct gaccgacgat ccccgccact tcaacccgat
      181 ctccaatcgt gattggccgc tctgccagta ttactagacc gctgatgaaa ttactggtga
      241 tgttttgcag accaaatccg acgccgaccc caaccgcacc agcaaaaacc gcaagtgcgg
      301 cgagatggat gccagcgttc tccagaacaa agaaaatgcc aaccaccaac acgatgttgc
      361 tgacgacttg ggcaatggcg tactgcaagg accggtcgag cccgcttggc gcaagcagcc
      421 ggttgaaaag aaaacgtttt gtcccggagg aaaaccaaaa caccgccacc aacaccgcga
      481 tcaggaggaa aatttgaacg aggctcaggt tgattgccgg tagaggagcg ctccaggcca
      541 gcggaattcc cgcagcattc acggccgtga ctgtgaaaaa gacaatggcc gccagactca
      601 agatcgtggt gacgatcgcg atgaagtttg tgtcgatctt gaaccggctg aaaaaacgcc
      661 gaacgatctg gctctgcaaa aaccgggcaa tgatcactcc ggcgccgaaa aacccgacga
      721 aggcgatcag tccaaggagc gttatgtagt gaccgccgac gtaaaacagc ggccgctgca
      781 ggagcgttat gtccacgtcc tagtgtgaac gtgtcatagg gcttcgcaac cagccgcttg
      841 tagaggcgtg cgggcgttgg acgcccgaag tttcgaaagc gacgctactg ctgcttggac
      901 gatttctctt cgatgtattt gatgacgtcg ccgacggttt gcaatttttc tgcgtcttcg
      961 tccggcactt ctaccccaaa ttcttcttca aaagccatta ccagttcgac gatgtccagt
     1021 gagtctgccc ctaaatcctc aataaaagat gcttgtggcg tgacctgttc cgggttcact
     1081 ccgagctgct cgacgatgat gtccttgacc ttctcttcga tcgatttttc cgccataaaa
     1141 tttgttcggt tggtattagt cgcgcgaggg taagtccgac agttgccgga caatccgggc
     1201 acagcatcgc aagtaaatga attaaatagg atgtcaatca ttttcgggga gtggtagaga
     1261 cgagactcgg cttggcgttt gcttccgttt gctgttcgag tagatgaacg tgatgagcgc
     1321 tctgtccgtc gagcccgccg atcttcttga tctgaagttt ttgccggcat gggtgaaaga
     1381 acccggtgcc acgaatcatt acgaccatta cacggcagag gaggcgccta ctgaactgcg
     1441 cagccgagac cggggcgcca gacacaagga tggagcattt cgctcccgcg aacggcgggg
     1501 acaaactcga cacccgccgt ccaagccgga ggggcgccac cgcggcagaa cgccgaaggc
     1561 agaaggcacc aggcgtcgcg attccgatcg aggcagaaat cgtcgttcgc cggatcggct
     1621 tccgcagccc acgccaaagc cgttcgaggg gacgattcat ttcctcccgc gtcagaacgt
     1681 attcgaaaat gtggttgctc agatcaactc cggctcggtt gcctattcgc tctttgttct
     1741 agcccgcttg ttcctggaaa aagctgggcg atatgaagtt cgtctcacgg caaaggcgga
     1801 atcgccgctt tttcaactag gcgagggcgg cgaagtctcc gtggagcggg aattcctcga
     1861 gcgaaacgca ttccggttcg cccagcgcga cttttaccag gtcaatgttg tggaaaccga
     1921 tccgataaaa ggaaatttct cgaatgttgc caggtgtcga ttgagcggaa cgcttctggg
     1981 cccgaccaat caccatgcat accaaccgca actgcgtagc ttatacgagc aacgtttcag
     2041 ccggcgattc agctttgccg attatcagcg gcaaattgag atcgtcagcg atcccgccat
     2101 ggtcgagcgc tggaaagagg aagcgagaaa aatcacgact tacacaaccg tgcgcgagca
     2161 aacgcctctg acgttttcgt ctgctgcgga agtggaacga cactttcgtt cgcactattt
     2221 accgggactc attcgtaacg tggacgacgt aactctcggc ggcacgtcaa gccggagttt
     2281 gccggaccga atactgaacg gggcgataga agaggcctgg gtgcgcgaaa cgcgctctcc
     2341 ttcaaatgtg atgcaagagc tggcgagccg attccggcaa aacggcctgc acgtttttcg
     2401 tcataggcgt ggcatgttgt ttgtttcatc cattcgggtc cgcgcgtttg ttcatgagca
     2461 cgccggcgtg tctcccttgg tgaacgcgat actcgaagca gtgtcggcga ctgcgggaat
     2521 taacaggaag cagcttttcg aaacattgac tggcaacggc gccaaggagg acggcgagcc
     2581 tcgccgactt gcgctcgcat ccgatttgcg ttggctgatc aacgaaggtt acctgatcga
     2641 gttcaacgac ggctcacttg atcggccacg gataaaatcg aagcagggcc aaaaaactgt
     2701 agaggcgctt gtgccaagcg cgttggcagt tgacgtaacc gtcactacaa cgcagtggcc
     2761 gctacagctt acctggcgag agccttagga gatcccctcg gcgtctgaca cagacgccct
     2821 aaaatttcag atagcgccgg ctttcttcag cgccttgtaa gcgccctgct tgtttattgt
     2881 cttgagaccg cgcgccgtga cgcgaacacg cacaaacttc ttcagctccg gcacccaaat
     2941 acgctggcgt cgcaaatttg gcgcgaaaat gcgcggcacc atcttcgtga tgtgccggcc
     3001 tacaccgcct ttcttcttgg ccaaaccgcg ccggtgaatc acgctgcctc gcaccgctct
     3061 tgatcctgta atgtgacaaa ctttcatgtc gcgaaaaaag ccgcgtaatc tggcgtcttt
     3121 gagcttggag gtcaagcgga tcatgcgtcg gcaatgatca aggaacgacg gcttggtcag
     3181 ccgtcactcc ttggatgttg aacgcgcaat tgctcgcagc ggtcaaacgt agctcgatca
     3241 taaccaatcg cttttgcagt agcgattatt gctcagaact aatggacaaa aataatcaca
     3301 aattgcggat cggaatcgta ggagccggca acatcgtgcg cacccgtcat ttgccgggcc
     3361 tcaaaaaaaa cgccgacgtg gaaattgtcg ccgtctcaaa ctccacatac gaaagttcgg
     3421 aacgcttctg ccgcgagaat tctctggcgg cactgccaat gcgcgattgg gcggagttgg
     3481 ttgcaacgcc ggacatcgac atcgtctgga ttggcacaac gccgtacatg cattcggcag
     3541 tcacaatctc cgcgcttgag gcaggcaaac atgttttttg tcaggctcgc atgtcgatgg
     3601 atctcgccga ggccgaggaa atgctcgcca tttccaagcg atatccagag ttggtgacga
     3661 tgctctgtcc gccacctttc ggactccgcg gcgatttaat ggtcaaaaaa attctcgccg
     3721 aaagttacat cggccagccg catcacgtgc gcttgcaaag tttccacgga aattacctgg
     3781 atcccgactc gccggcacat tggcgccaaa aaatcgagat cagtggactc aatacgctca
     3841 ctttggggat ttacattgaa gttttgcagc gctggcttgg cgacatcact ggtgtgttcg
     3901 cgcgcgggaa aatcgttcag ccacttcgcg aagcctacaa cgtgattgtt cccgatttgc
     3961 tcaccgtgct atgcagtttt gaaagtggcg cggaaggcgt gcttgagttc agcggaatta
     4021 atgcgctggc ggaaggtgat cggctggaaa tttacggcag caacgggacc ctgacctatg
     4081 atttcacggc cgacgtcatg cagacgggaa aggtgggcga tcgtgcattg cacgtcgtgg
     4141 atgttcccac ggaattagaa ggcgaatggc gcgtggaaga agattttctt gccgcggtga
     4201 agtcaaaagg gcgcgtgctt ccccatccaa atttcgaaga cggccttcgc tacatgcgcg
     4261 tcgtgcaagc tgtctccgat tcccgtgtgc ggaacgagtg ggtagcaatc aagagttgag
     4321 gccaccaggc atttttacgc ggccatcgtg tctggaacga gatatctcct taccagcagc
     4381 gcccagatta gcagcgtgat cagttgatac cacgcaaaga aacgatcgta gccccgtcga
     4441 tgcgcaaaga gaccgatggc tgcgagaacg gcgtagtgac ctacaaaggg tacgtaccaa
     4501 attggatgaa gtagatcgcc gtggatcgcg gtttgcgcga tatcaagcac gcacatcgcg
     4561 ataaacgcgg aatagtagcc cacacggttt cgttggaacc agcgctggtg ttcctccgct
     4621 tccgataggt cgggcggata aagaaaaacg gtgagcatgt aaagcgtgat ggtccaaacg
     4681 atcagcacga gaaacctgtc aaagctccaa atgacctcgg tgttccattt aaatgtcacc
     4741 caccattgca agaccagcag cagcag
//
